Query         046639
Match_columns 331
No_of_seqs    161 out of 1793
Neff          10.2
Searched_HMMs 29240
Date          Mon Mar 25 04:29:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046639hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 4.9E-59 1.7E-63  404.1  18.4  261   30-325    13-290 (299)
  2 4b9d_A Serine/threonine-protei 100.0 2.8E-59 9.6E-64  411.3  16.2  251   30-317    24-276 (350)
  3 4fih_A Serine/threonine-protei 100.0   1E-58 3.5E-63  407.1  18.4  250   30-317    74-323 (346)
  4 4aoj_A High affinity nerve gro 100.0 4.6E-58 1.6E-62  403.2  22.1  261   30-325    41-320 (329)
  5 3omv_A RAF proto-oncogene seri 100.0 3.8E-58 1.3E-62  398.6  21.1  263   30-327    36-303 (307)
  6 4g3f_A NF-kappa-beta-inducing  100.0 2.6E-58 8.8E-63  403.5  18.1  264   28-328    56-320 (336)
  7 3fpq_A Serine/threonine-protei 100.0 2.1E-57 7.1E-62  391.3  21.6  251   31-317    26-282 (290)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.1E-58 3.6E-63  401.3  12.9  249   30-316    32-283 (311)
  9 4fie_A Serine/threonine-protei 100.0 2.6E-57 8.8E-62  407.7  19.7  250   30-317   151-400 (423)
 10 3hyh_A Carbon catabolite-derep 100.0 1.2E-57   4E-62  389.5  16.6  246   30-317    13-262 (275)
 11 4gt4_A Tyrosine-protein kinase 100.0 2.9E-57 9.9E-62  394.6  18.1  257   31-322    27-304 (308)
 12 4ase_A Vascular endothelial gr 100.0 1.8E-56 6.3E-61  396.1  18.3  265   29-326    63-349 (353)
 13 3hmm_A TGF-beta receptor type- 100.0 8.1E-56 2.8E-60  386.1  19.5  275   30-325     3-298 (303)
 14 3ubd_A Ribosomal protein S6 ki 100.0   8E-57 2.7E-61  389.5   8.8  243   30-312    24-271 (304)
 15 4g31_A Eukaryotic translation  100.0 3.3E-55 1.1E-59  380.6  18.7  262   30-317     5-279 (299)
 16 4b99_A Mitogen-activated prote 100.0 6.5E-53 2.2E-57  379.5  20.5  277   30-317    54-344 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 1.5E-51 5.2E-56  366.8  18.1  275   28-317    19-352 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0   5E-51 1.7E-55  384.1  21.1  253   29-317   156-410 (573)
 19 3v5w_A G-protein coupled recep 100.0 5.6E-51 1.9E-55  382.6  20.1  249   29-316   188-448 (689)
 20 3s95_A LIMK-1, LIM domain kina 100.0 4.8E-49 1.6E-53  345.7  18.6  268   29-328     9-286 (310)
 21 3fxz_A Serine/threonine-protei 100.0 8.7E-49   3E-53  341.9  20.1  252   28-317    18-269 (297)
 22 3fe3_A MAP/microtubule affinit 100.0 6.9E-49 2.4E-53  346.8  15.9  255   22-317     7-264 (328)
 23 2qkw_B Protein kinase; three-h 100.0 4.2E-48 1.4E-52  341.3  20.8  284   20-325    29-316 (321)
 24 3uim_A Brassinosteroid insensi 100.0 4.7E-48 1.6E-52  341.7  20.9  289   14-322    14-309 (326)
 25 3ugc_A Tyrosine-protein kinase 100.0 2.8E-48 9.6E-53  338.4  17.3  279   28-328     8-295 (295)
 26 2psq_A Fibroblast growth facto 100.0 2.5E-47 8.6E-52  342.5  21.7  266   29-329    80-369 (370)
 27 3zgw_A Maternal embryonic leuc 100.0 2.1E-48 7.3E-53  345.7  14.3  252   27-317     7-260 (347)
 28 3p86_A Serine/threonine-protei 100.0 9.2E-48 3.1E-52  337.2  18.0  263   26-326    33-300 (309)
 29 3kul_A Ephrin type-A receptor  100.0 1.8E-47 6.1E-52  337.7  19.4  265   29-328    48-317 (325)
 30 3vhe_A Vascular endothelial gr 100.0 1.1E-47 3.7E-52  343.7  18.0  274   20-326    12-357 (359)
 31 2c30_A Serine/threonine-protei 100.0 5.7E-47 1.9E-51  334.0  22.0  266   14-317    19-294 (321)
 32 3q4u_A Activin receptor type-1 100.0 1.2E-46 3.9E-51  328.9  23.6  269   28-322     6-300 (301)
 33 2nru_A Interleukin-1 receptor- 100.0 3.7E-46 1.3E-50  326.8  26.7  286   14-325     9-307 (307)
 34 3soc_A Activin receptor type-2 100.0 2.5E-47 8.6E-52  336.5  19.2  284   28-326    22-320 (322)
 35 1o6l_A RAC-beta serine/threoni 100.0 2.5E-47 8.5E-52  337.9  19.1  249   29-317     4-260 (337)
 36 4euu_A Serine/threonine-protei 100.0 1.2E-46 4.2E-51  331.6  23.4  279   29-322     8-307 (319)
 37 4eqm_A Protein kinase; transfe 100.0 1.5E-47   5E-52  333.7  17.0  263   29-325    10-276 (294)
 38 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-47 8.9E-52  337.4  18.5  247   29-317     8-258 (336)
 39 2yab_A Death-associated protei 100.0 6.1E-47 2.1E-51  338.3  20.7  253   28-317    10-272 (361)
 40 3lb7_A RAF proto-oncogene seri 100.0 1.2E-46 4.2E-51  329.8  21.6  265   29-328    35-304 (307)
 41 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-47 5.8E-52  344.6  16.0  262   28-325   112-375 (377)
 42 1tki_A Titin; serine kinase, m 100.0 1.4E-46 4.7E-51  331.4  21.1  252   29-317     4-257 (321)
 43 3tki_A Serine/threonine-protei 100.0 3.2E-47 1.1E-51  335.8  16.5  254   29-317     6-261 (323)
 44 3g33_A Cell division protein k 100.0 5.5E-47 1.9E-51  332.2  17.3  276   28-317     7-296 (308)
 45 2y0a_A Death-associated protei 100.0 1.5E-46   5E-51  332.1  19.6  252   29-317    10-271 (326)
 46 1luf_A Muscle-specific tyrosin 100.0 1.4E-46 4.9E-51  334.4  19.0  269   25-328    42-339 (343)
 47 3c0i_A Peripheral plasma membr 100.0 2.3E-46 7.8E-51  334.1  20.3  254   29-317    23-286 (351)
 48 3kfa_A Tyrosine-protein kinase 100.0   1E-46 3.5E-51  327.2  17.4  263   28-327    11-274 (288)
 49 3soa_A Calcium/calmodulin-depe 100.0 3.5E-46 1.2E-50  341.7  21.6  255   27-317     8-267 (444)
 50 4fr4_A YANK1, serine/threonine 100.0 2.7E-46 9.1E-51  336.1  20.3  250   29-316    14-270 (384)
 51 1k9a_A Carboxyl-terminal SRC k 100.0 3.2E-46 1.1E-50  343.6  21.3  254   29-325   192-446 (450)
 52 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-47 9.1E-52  339.7  13.6  251   27-317    20-280 (353)
 53 3l9p_A Anaplastic lymphoma kin 100.0   7E-47 2.4E-51  339.4  16.4  263   29-326    70-347 (367)
 54 3gni_B Strad alpha; kinase fol 100.0 2.1E-46 7.1E-51  339.1  19.6  281   27-317    22-333 (389)
 55 4dc2_A Protein kinase C IOTA t 100.0 8.8E-47   3E-51  340.4  17.1  250   28-312    50-307 (396)
 56 3tt0_A Basic fibroblast growth 100.0 3.7E-46 1.3E-50  336.6  21.0  268   27-329    66-357 (382)
 57 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-46 4.3E-51  330.6  17.3  265   26-325    19-312 (314)
 58 3ttj_A Mitogen-activated prote 100.0 8.2E-46 2.8E-50  341.7  23.5  271   29-317    61-355 (464)
 59 3o0g_A Cell division protein k 100.0 4.9E-46 1.7E-50  323.7  20.5  270   30-317     2-282 (292)
 60 3op5_A Serine/threonine-protei 100.0 5.7E-46 1.9E-50  333.3  21.5  283   28-328    33-333 (364)
 61 4hcu_A Tyrosine-protein kinase 100.0 2.5E-46 8.6E-51  321.7  18.3  258   29-325     9-267 (269)
 62 4f0f_A Serine/threonine-protei 100.0 5.1E-46 1.8E-50  322.7  20.4  254   29-322    18-287 (287)
 63 3lxl_A Tyrosine-protein kinase 100.0 1.3E-46 4.5E-51  332.6  16.7  278   29-328    22-307 (327)
 64 1kob_A Twitchin; kinase, intra 100.0 6.6E-46 2.3E-50  334.4  21.5  254   28-317    49-304 (387)
 65 2bdw_A Hypothetical protein K1 100.0 5.3E-46 1.8E-50  332.9  20.5  254   27-317    26-284 (362)
 66 1csn_A Casein kinase-1; phosph 100.0 5.8E-46   2E-50  324.0  20.2  272   28-328     8-287 (298)
 67 1xjd_A Protein kinase C, theta 100.0 5.1E-47 1.8E-51  336.7  13.6  253   24-316    11-268 (345)
 68 2izr_A Casein kinase I isoform 100.0 3.7E-46 1.3E-50  330.1  19.0  268   29-326     8-283 (330)
 69 1t46_A HOMO sapiens V-KIT hard 100.0 3.5E-46 1.2E-50  327.6  18.4  267   27-327    20-310 (313)
 70 2qol_A Ephrin receptor; recept 100.0 3.6E-46 1.2E-50  335.3  18.8  263   29-326    44-311 (373)
 71 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-46 7.8E-51  329.3  17.2  246   29-317     5-258 (318)
 72 1rjb_A FL cytokine receptor; k 100.0   2E-46   7E-51  333.6  16.9  267   28-328    43-338 (344)
 73 3a8x_A Protein kinase C IOTA t 100.0 3.5E-46 1.2E-50  331.8  18.3  249   29-312     8-264 (345)
 74 3qup_A Tyrosine-protein kinase 100.0 4.1E-46 1.4E-50  328.8  18.4  270   27-326    20-300 (323)
 75 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-46 4.6E-51  349.9  16.1  260   29-325   219-479 (495)
 76 3g2f_A Bone morphogenetic prot 100.0   7E-46 2.4E-50  329.0  20.0  294   28-328    11-322 (336)
 77 2xir_A Vascular endothelial gr 100.0 3.4E-46 1.2E-50  328.2  17.5  275   21-328    18-314 (316)
 78 3llt_A Serine/threonine kinase 100.0 6.4E-46 2.2E-50  332.4  19.6  281   15-317    20-355 (360)
 79 2w4o_A Calcium/calmodulin-depe 100.0 3.8E-46 1.3E-50  332.3  18.0  253   27-317    50-305 (349)
 80 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.8E-46 9.6E-51  332.9  16.9  246   29-317    40-293 (350)
 81 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.6E-46 1.6E-50  319.8  17.6  259   28-325     6-265 (268)
 82 2pvf_A Fibroblast growth facto 100.0 3.3E-46 1.1E-50  331.0  17.1  268   26-328    31-322 (334)
 83 3niz_A Rhodanese family protei 100.0 1.3E-45 4.4E-50  323.9  20.5  275   23-317    14-300 (311)
 84 4e5w_A Tyrosine-protein kinase 100.0 4.4E-46 1.5E-50  325.4  17.4  270   29-323    20-301 (302)
 85 3ork_A Serine/threonine protei 100.0 1.4E-46 4.8E-51  330.1  14.3  266   28-322    10-279 (311)
 86 4eut_A Serine/threonine-protei 100.0 5.6E-46 1.9E-50  336.9  18.6  283   28-325     7-310 (396)
 87 3brb_A Proto-oncogene tyrosine 100.0 1.4E-45 4.7E-50  324.0  20.5  275   24-328    28-312 (313)
 88 2pmi_A Negative RE, cyclin-dep 100.0   1E-45 3.5E-50  325.5  19.6  271   29-317     4-293 (317)
 89 4hgt_A Casein kinase I isoform 100.0 1.8E-45   6E-50  320.6  20.9  272   28-327     7-283 (296)
 90 3og7_A AKAP9-BRAF fusion prote 100.0 6.3E-46 2.2E-50  322.6  18.0  261   29-324    23-288 (289)
 91 2i0e_A Protein kinase C-beta I 100.0 3.4E-46 1.2E-50  332.5  16.5  250   27-316    17-275 (353)
 92 2buj_A Serine/threonine-protei 100.0 2.7E-46 9.4E-51  329.0  15.7  277   28-327    27-309 (317)
 93 3kmu_A ILK, integrin-linked ki 100.0 3.3E-46 1.1E-50  321.0  15.6  255   29-324     9-270 (271)
 94 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-45 6.1E-50  322.5  20.4  258   30-328     8-267 (307)
 95 2wqm_A Serine/threonine-protei 100.0 2.2E-45 7.7E-50  322.2  20.7  267   28-328    30-301 (310)
 96 1t4h_A Serine/threonine-protei 100.0 3.5E-45 1.2E-49  318.0  21.7  254   28-317    24-282 (290)
 97 3poz_A Epidermal growth factor 100.0 8.3E-46 2.8E-50  327.4  17.7  260   29-325    14-279 (327)
 98 3uc3_A Serine/threonine-protei 100.0 9.4E-46 3.2E-50  331.2  18.2  254   28-317    18-274 (361)
 99 1nxk_A MAP kinase-activated pr 100.0 3.9E-45 1.3E-49  331.4  22.4  254   29-317    60-321 (400)
100 2w1i_A JAK2; chromosomal rearr 100.0 8.9E-46   3E-50  327.1  17.7  279   28-328    39-326 (326)
101 1ob3_A PFPK5, cell division co 100.0 1.5E-45   5E-50  320.2  18.7  268   30-317     2-280 (288)
102 3uzp_A CKI-delta, CKID, casein 100.0 5.9E-45   2E-49  317.3  22.6  271   29-327     8-283 (296)
103 1qcf_A Haematopoetic cell kina 100.0 4.1E-46 1.4E-50  343.5  16.1  261   27-326   185-446 (454)
104 3qd2_B Eukaryotic translation  100.0 2.2E-45 7.5E-50  325.0  20.2  263   29-317     5-325 (332)
105 3gen_A Tyrosine-protein kinase 100.0 1.3E-45 4.6E-50  319.5  18.3  259   28-325    22-281 (283)
106 1mp8_A Focal adhesion kinase 1 100.0 1.3E-45 4.4E-50  319.3  18.2  261   28-326    13-278 (281)
107 2y94_A 5'-AMP-activated protei 100.0 6.1E-46 2.1E-50  342.4  17.1  248   29-317    15-266 (476)
108 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-45 7.7E-50  320.5  19.6  252   29-317    12-292 (298)
109 2i1m_A Macrophage colony-stimu 100.0   7E-46 2.4E-50  328.7  16.6  268   26-327    42-329 (333)
110 3f3z_A Calcium/calmodulin-depe 100.0 3.2E-45 1.1E-49  316.2  20.0  253   27-317     6-261 (277)
111 2h34_A Serine/threonine-protei 100.0 1.8E-45   6E-50  322.8  18.7  266   27-328    31-300 (309)
112 2a2a_A Death-associated protei 100.0 2.4E-45 8.1E-50  323.7  19.5  253   28-317    10-272 (321)
113 2eue_A Carbon catabolite derep 100.0 5.4E-46 1.9E-50  320.7  15.1  247   29-317    12-262 (275)
114 3pls_A Macrophage-stimulating  100.0 5.5E-45 1.9E-49  317.8  21.6  269   30-330    21-293 (298)
115 3rp9_A Mitogen-activated prote 100.0 3.5E-45 1.2E-49  337.9  21.4  283   29-317    52-396 (458)
116 3oz6_A Mitogen-activated prote 100.0 2.9E-45   1E-49  331.4  20.4  280   27-317     6-328 (388)
117 3hko_A Calcium/calmodulin-depe 100.0 1.2E-45 4.1E-50  328.7  17.6  269   25-323    21-338 (345)
118 4fvq_A Tyrosine-protein kinase 100.0 3.1E-46 1.1E-50  324.3  13.4  254   29-326     7-277 (289)
119 3f66_A Hepatocyte growth facto 100.0 2.5E-45 8.7E-50  320.1  19.1  272   26-330    21-297 (298)
120 1xbb_A Tyrosine-protein kinase 100.0 6.5E-46 2.2E-50  322.8  15.1  270   23-329     9-284 (291)
121 3dtc_A Mitogen-activated prote 100.0 6.1E-46 2.1E-50  319.5  14.6  251   29-322     6-271 (271)
122 2acx_A G protein-coupled recep 100.0 1.9E-45 6.4E-50  343.9  19.0  255   28-317   182-444 (576)
123 2x4f_A Myosin light chain kina 100.0 3.6E-45 1.2E-49  328.6  20.1  247   35-317    94-342 (373)
124 3kk8_A Calcium/calmodulin depe 100.0 8.9E-45   3E-49  314.4  21.5  253   28-317     4-261 (284)
125 2a19_B Interferon-induced, dou 100.0 1.1E-45 3.6E-50  320.1  15.4  258   28-327     9-277 (284)
126 3kex_A Receptor tyrosine-prote 100.0 8.2E-46 2.8E-50  327.2  15.0  260   29-325    12-277 (325)
127 2yex_A Serine/threonine-protei 100.0 4.4E-45 1.5E-49  315.0  19.1  255   28-317     5-261 (276)
128 2r5t_A Serine/threonine-protei 100.0 3.1E-46 1.1E-50  335.0  12.2  250   27-316    35-288 (373)
129 2v62_A Serine/threonine-protei 100.0 1.4E-45 4.7E-50  328.4  16.2  276   29-326    36-330 (345)
130 3fdn_A Serine/threonine-protei 100.0 1.9E-45 6.7E-50  317.8  16.6  248   28-317     7-257 (279)
131 2jii_A Serine/threonine-protei 100.0 1.4E-45 4.7E-50  329.3  16.1  279   29-328    41-340 (352)
132 1byg_A CSK, protein (C-termina 100.0 1.5E-45   5E-50  318.4  15.8  254   29-325    20-274 (278)
133 3v8s_A RHO-associated protein  100.0 5.9E-46   2E-50  336.7  13.8  260   22-317    61-329 (410)
134 4ejn_A RAC-alpha serine/threon 100.0 4.2E-46 1.4E-50  342.8  13.0  250   28-317   146-404 (446)
135 3c1x_A Hepatocyte growth facto 100.0 1.8E-45 6.3E-50  330.4  16.8  268   30-330    89-361 (373)
136 3mdy_A Bone morphogenetic prot 100.0 3.5E-44 1.2E-48  318.1  24.9  280   24-326    31-333 (337)
137 4aw2_A Serine/threonine-protei 100.0 6.6E-46 2.3E-50  338.8  13.9  264   21-317    65-338 (437)
138 3i6u_A CDS1, serine/threonine- 100.0 5.6E-45 1.9E-49  332.4  20.0  254   27-317   132-399 (419)
139 3lxp_A Non-receptor tyrosine-p 100.0 2.7E-45 9.1E-50  323.0  17.2  276   30-329    30-315 (318)
140 3a62_A Ribosomal protein S6 ki 100.0 1.7E-45   6E-50  325.3  15.9  249   29-317    16-276 (327)
141 3cok_A Serine/threonine-protei 100.0 4.1E-45 1.4E-49  315.6  17.8  251   28-317     9-262 (278)
142 3qyz_A Mitogen-activated prote 100.0 7.4E-45 2.5E-49  326.0  20.1  277   28-317    25-313 (364)
143 3t9t_A Tyrosine-protein kinase 100.0 4.6E-45 1.6E-49  313.3  17.9  258   29-325     7-265 (267)
144 1qpc_A LCK kinase; alpha beta  100.0 2.6E-45 8.9E-50  317.0  16.3  261   29-328    12-273 (279)
145 3dls_A PAS domain-containing s 100.0 1.4E-45 4.9E-50  326.8  14.9  243   28-317    22-274 (335)
146 3is5_A Calcium-dependent prote 100.0   3E-45   1E-49  317.7  16.5  252   29-317    21-278 (285)
147 1b6c_B TGF-B superfamily recep 100.0   4E-44 1.4E-48  318.5  24.1  280   21-326    33-338 (342)
148 1mqb_A Ephrin type-A receptor  100.0 1.2E-44   4E-49  320.9  20.5  263   30-327    44-312 (333)
149 1fvr_A Tyrosine-protein kinase 100.0 2.6E-45 8.8E-50  324.3  16.3  271   11-326    13-302 (327)
150 3cc6_A Protein tyrosine kinase 100.0   7E-45 2.4E-49  314.7  18.7  261   28-326    10-275 (281)
151 3lzb_A Epidermal growth factor 100.0 4.5E-45 1.5E-49  322.7  17.7  260   29-325    14-279 (327)
152 3p1a_A MYT1 kinase, membrane-a 100.0 6.2E-45 2.1E-49  319.6  18.5  245   30-317    57-304 (311)
153 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.9E-45 6.3E-50  338.8  15.7  260   28-326   182-442 (452)
154 4agu_A Cyclin-dependent kinase 100.0 4.1E-45 1.4E-49  320.7  17.1  270   29-317     2-284 (311)
155 3gxj_A TGF-beta receptor type- 100.0 1.6E-46 5.3E-51  328.3   8.0  272   29-326     2-299 (303)
156 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-45 9.1E-50  323.8  16.0  252   31-316     9-269 (325)
157 3n9x_A Phosphotransferase; mal 100.0 6.5E-45 2.2E-49  333.4  19.1  212   29-246    25-253 (432)
158 2vd5_A DMPK protein; serine/th 100.0 1.1E-45 3.7E-50  335.2  13.8  263   21-317    52-327 (412)
159 2ac3_A MAP kinase-interacting  100.0 7.5E-45 2.6E-49  319.7  18.7  270   29-317    11-295 (316)
160 1u59_A Tyrosine-protein kinase 100.0 9.1E-45 3.1E-49  314.9  18.9  264   29-328     8-276 (287)
161 2xrw_A Mitogen-activated prote 100.0 4.3E-44 1.5E-48  321.8  23.9  271   29-317    24-318 (371)
162 2jam_A Calcium/calmodulin-depe 100.0 4.8E-45 1.7E-49  319.3  17.1  252   28-317     7-261 (304)
163 3ll6_A Cyclin G-associated kin 100.0 2.5E-44 8.7E-49  318.8  21.9  276   23-326    21-310 (337)
164 1cm8_A Phosphorylated MAP kina 100.0 8.4E-45 2.9E-49  325.8  19.0  270   29-317    24-307 (367)
165 1p4o_A Insulin-like growth fac 100.0 1.4E-45 4.9E-50  325.1  13.7  267   23-324    18-299 (322)
166 3kvw_A DYRK2, dual specificity 100.0   8E-45 2.7E-49  332.3  18.8  200   28-248    95-302 (429)
167 3lm5_A Serine/threonine-protei 100.0 2.3E-45 7.8E-50  324.6  14.5  261   22-317    20-287 (327)
168 2r3i_A Cell division protein k 100.0 9.5E-45 3.3E-49  316.5  18.0  271   29-317     2-283 (299)
169 1u5q_A Serine/threonine protei 100.0   6E-45 2.1E-49  324.3  16.9  246   30-317    54-305 (348)
170 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-44   4E-49  337.6  19.5  250   29-312   184-438 (543)
171 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.4E-45 1.5E-49  323.1  15.8  275   23-317    27-318 (329)
172 2rku_A Serine/threonine-protei 100.0 7.1E-45 2.4E-49  316.7  16.7  250   28-317    13-265 (294)
173 3bhy_A Death-associated protei 100.0 1.3E-44 4.3E-49  313.3  18.1  258   29-323     4-273 (283)
174 2w5a_A Serine/threonine-protei 100.0 6.2E-45 2.1E-49  314.6  16.1  257   29-320     5-270 (279)
175 2vgo_A Serine/threonine-protei 100.0 7.6E-45 2.6E-49  314.9  16.7  247   29-317    13-262 (284)
176 3mwu_A Calmodulin-domain prote 100.0 1.7E-44 5.8E-49  335.6  20.0  252   28-317    20-276 (486)
177 3mtl_A Cell division protein k 100.0 1.6E-45 5.3E-50  325.3  12.3  269   30-317     2-281 (324)
178 2clq_A Mitogen-activated prote 100.0 1.6E-44 5.4E-49  314.5  18.3  252   31-317    23-278 (295)
179 2h6d_A 5'-AMP-activated protei 100.0 1.3E-44 4.4E-49  312.1  17.4  249   28-317     9-261 (276)
180 2owb_A Serine/threonine-protei 100.0 5.7E-45   2E-49  323.1  15.6  250   28-317    39-291 (335)
181 2yfx_A Tyrosine-protein kinase 100.0   9E-45 3.1E-49  320.8  16.7  263   29-326    29-306 (327)
182 3dbq_A Dual specificity protei 100.0 4.7E-45 1.6E-49  324.7  14.9  253   27-317     6-273 (343)
183 3eb0_A Putative uncharacterize 100.0 1.3E-44 4.6E-49  326.5  17.9  275   25-317     2-321 (383)
184 2wtk_C Serine/threonine-protei 100.0 2.1E-44 7.1E-49  315.3  18.5  255   28-317     3-263 (305)
185 3pg1_A Mitogen-activated prote 100.0   2E-44 6.8E-49  323.0  18.8  281   21-317    13-316 (362)
186 2qr7_A Ribosomal protein S6 ki 100.0   1E-44 3.4E-49  322.0  16.7  254   27-317    19-277 (342)
187 1ua2_A CAK, cell division prot 100.0 1.6E-44 5.6E-49  321.6  17.8  274   25-317     5-291 (346)
188 1wak_A Serine/threonine-protei 100.0 2.2E-44 7.6E-49  326.4  18.8  273   29-317    36-391 (397)
189 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-44 8.6E-49  314.5  18.5  250   29-318    21-271 (303)
190 2y7j_A Phosphorylase B kinase  100.0 6.6E-44 2.2E-48  319.8  21.6  256   25-317    89-359 (365)
191 3nyv_A Calmodulin-domain prote 100.0 1.1E-44 3.7E-49  336.8  17.1  252   28-317    24-281 (484)
192 3q5i_A Protein kinase; CDPK, m 100.0 5.5E-44 1.9E-48  333.5  21.8  253   27-317    33-301 (504)
193 3nsz_A CK II alpha, casein kin 100.0 2.9E-44 9.8E-49  317.9  18.7  264   29-317    35-319 (330)
194 2zmd_A Dual specificity protei 100.0 1.1E-44 3.7E-49  327.5  16.3  251   29-317    55-320 (390)
195 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-44   4E-49  319.8  15.9  271   15-317     9-286 (326)
196 3lij_A Calcium/calmodulin depe 100.0 3.9E-44 1.3E-48  333.7  20.3  252   28-317    35-291 (494)
197 2ozo_A Tyrosine-protein kinase 100.0 2.9E-44 9.8E-49  341.9  19.6  261   32-328   337-602 (613)
198 3eqc_A Dual specificity mitoge 100.0 1.8E-44 6.1E-49  323.1  17.1  265   29-317    32-324 (360)
199 2j7t_A Serine/threonine-protei 100.0 6.9E-45 2.4E-49  317.9  14.1  254   28-317    17-275 (302)
200 2ycf_A Serine/threonine-protei 100.0 2.6E-44 9.1E-49  317.1  17.7  253   28-317     8-274 (322)
201 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-44 1.1E-48  311.2  17.7  246   28-317     9-279 (289)
202 3fme_A Dual specificity mitoge 100.0 2.1E-44   7E-49  313.0  16.3  254   28-317     5-266 (290)
203 3byv_A Rhoptry kinase; malaria 100.0 1.1E-45 3.6E-50  333.0   8.5  255   29-325    72-369 (377)
204 4fl3_A Tyrosine-protein kinase 100.0 3.3E-44 1.1E-48  342.3  19.1  255   36-327   375-634 (635)
205 1blx_A Cyclin-dependent kinase 100.0   5E-44 1.7E-48  315.8  18.7  277   27-317     8-296 (326)
206 2h8h_A Proto-oncogene tyrosine 100.0 7.7E-45 2.6E-49  341.1  14.1  260   28-326   265-525 (535)
207 3pfq_A PKC-B, PKC-beta, protei 100.0 2.4E-44 8.4E-49  345.4  17.9  245   28-312   339-587 (674)
208 2fst_X Mitogen-activated prote 100.0 1.1E-44 3.7E-49  324.8  14.5  270   29-317    28-311 (367)
209 3sv0_A Casein kinase I-like; t 100.0 1.1E-43 3.8E-48  327.9  21.3  270   29-326     6-280 (483)
210 2b9h_A MAP kinase FUS3, mitoge 100.0 5.6E-44 1.9E-48  318.9  18.6  282   28-317     9-305 (353)
211 4aaa_A Cyclin-dependent kinase 100.0 1.4E-44 4.7E-49  320.2  14.3  268   29-317    24-306 (331)
212 3mi9_A Cell division protein k 100.0 1.6E-43 5.5E-48  315.8  20.8  279   29-317    16-311 (351)
213 1phk_A Phosphorylase kinase; g 100.0 1.2E-43 4.3E-48  309.3  19.6  254   27-317    14-283 (298)
214 3com_A Serine/threonine-protei 100.0 5.4E-44 1.8E-48  314.0  17.3  253   27-317    26-278 (314)
215 2vwi_A Serine/threonine-protei 100.0 1.1E-44 3.8E-49  316.6  12.6  268   27-317    12-287 (303)
216 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-44 1.1E-48  321.9  16.0  261   24-327    59-342 (365)
217 2vx3_A Dual specificity tyrosi 100.0 1.8E-43 6.2E-48  319.0  20.4  205   25-248    49-261 (382)
218 3an0_A Dual specificity mitoge 100.0 5.9E-44   2E-48  317.3  16.7  254   28-317    49-310 (340)
219 1u46_A ACK-1, activated CDC42  100.0 2.3E-44 7.8E-49  312.9  13.5  265   29-328    17-288 (291)
220 3q60_A ROP5B; pseudokinase, tr 100.0 4.8E-44 1.7E-48  321.5  15.9  260   29-317    61-352 (371)
221 3e3p_A Protein kinase, putativ 100.0 4.6E-43 1.6E-47  313.8  21.7  282   21-317    14-314 (360)
222 1j1b_A Glycogen synthase kinas 100.0 1.2E-43   4E-48  323.8  18.0  270   30-317    54-336 (420)
223 3fhr_A MAP kinase-activated pr 100.0 6.3E-44 2.2E-48  316.5  15.7  259   27-317    25-287 (336)
224 2pml_X PFPK7, Ser/Thr protein  100.0 3.8E-44 1.3E-48  319.4  14.4  267   29-317    30-322 (348)
225 1z57_A Dual specificity protei 100.0 2.4E-43 8.1E-48  312.8  19.4  267   29-317    13-328 (339)
226 2i6l_A Mitogen-activated prote 100.0 2.3E-43 7.8E-48  310.5  19.1  276   29-317    10-305 (320)
227 4exu_A Mitogen-activated prote 100.0 9.9E-44 3.4E-48  319.4  17.0  270   28-317    40-323 (371)
228 1vzo_A Ribosomal protein S6 ki 100.0 5.9E-44   2E-48  319.0  14.5  255   29-318    53-322 (355)
229 1zy4_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  307.0  18.2  265   28-317     4-283 (303)
230 1q8y_A SR protein kinase; tran 100.0 1.9E-43 6.5E-48  317.8  16.6  273   29-317    18-333 (373)
231 4e7w_A Glycogen synthase kinas 100.0 5.2E-43 1.8E-47  317.0  19.1  270   29-317    39-321 (394)
232 3rgf_A Cyclin-dependent kinase 100.0 8.3E-44 2.8E-48  323.6  13.8  205   30-248    20-239 (405)
233 2wei_A Calmodulin-domain prote 100.0 8.4E-43 2.9E-47  302.6  19.3  253   26-317    18-276 (287)
234 2eu9_A Dual specificity protei 100.0 2.3E-42 7.7E-47  308.5  21.5  268   28-317    17-333 (355)
235 3coi_A Mitogen-activated prote 100.0 6.9E-43 2.4E-47  312.0  17.3  269   29-317    23-305 (353)
236 2j0j_A Focal adhesion kinase 1 100.0 6.5E-43 2.2E-47  334.6  17.7  264   24-325   384-652 (656)
237 3aln_A Dual specificity mitoge 100.0 1.1E-42 3.6E-47  307.5  17.6  257   28-317    20-285 (327)
238 3cek_A Dual specificity protei 100.0 2.2E-43 7.5E-48  310.0  12.4  259   21-317    19-292 (313)
239 2dyl_A Dual specificity mitoge 100.0 1.7E-42 5.9E-47  304.8  15.6  253   28-317    23-283 (318)
240 2iwi_A Serine/threonine-protei 100.0 5.3E-43 1.8E-47  307.4  12.2  247   23-317    24-283 (312)
241 3a99_A Proto-oncogene serine/t 100.0 2.9E-43   1E-47  310.2   9.6  248   22-317    35-293 (320)
242 3qa8_A MGC80376 protein; kinas 100.0 1.9E-42 6.6E-47  326.9  15.3  280   28-323    12-308 (676)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.6E-43 1.6E-47  308.6  10.2  265   26-326    29-304 (319)
244 3uqc_A Probable conserved tran 100.0   3E-41   1E-45  292.4  16.9  236   29-327    30-268 (286)
245 3m2w_A MAP kinase-activated pr 100.0 1.2E-40 4.1E-45  290.7  20.3  237   28-317    15-256 (299)
246 2rio_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45  308.0  18.4  254   30-317    15-295 (434)
247 3p23_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45  303.3  17.5  252   28-317    22-283 (432)
248 3dzo_A Rhoptry kinase domain;  100.0 2.8E-41 9.6E-46  307.4  11.8  247   29-317    77-363 (413)
249 2pzi_A Probable serine/threoni 100.0 2.2E-40 7.4E-45  319.6  18.7  247   29-324    79-328 (681)
250 2vuw_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44  288.4   9.9  247   29-316    19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.4E-32 8.2E-37  257.1   5.3  186   37-244   241-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9   8E-28 2.7E-32  225.1   6.4  192   32-246   338-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 8.3E-26 2.8E-30  194.7  10.4  143   21-186    81-241 (282)
254 1zth_A RIO1 serine protein kin  99.8 4.1E-21 1.4E-25  163.3  11.1  146   23-187    40-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 3.4E-18 1.2E-22  151.3   7.1  145   21-186    86-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4   9E-13 3.1E-17  111.9  10.5  150   23-186     7-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 1.4E-11 4.8E-16  104.3   6.7  144   24-186    14-214 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 8.3E-10 2.8E-14   98.0  10.8  146   33-186    41-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.0 5.6E-10 1.9E-14   96.8   9.3  196   35-246    25-288 (304)
260 3r70_A Aminoglycoside phosphot  98.8 1.2E-07 3.9E-12   82.7  13.5  136   31-186    38-237 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.7 1.4E-07 4.9E-12   80.0  13.1  136   37-186    31-223 (272)
262 3d1u_A Putative fructosamine-3  98.6 3.6E-07 1.2E-11   78.3  10.7   78   32-119    17-97  (288)
263 3tdw_A Gentamicin resistance p  98.5 1.2E-06 4.3E-11   75.6  13.3  137   35-186    24-224 (306)
264 3ovc_A Hygromycin-B 4-O-kinase  98.3 4.4E-06 1.5E-10   73.9  12.0   78   32-120    43-122 (362)
265 2olc_A MTR kinase, methylthior  98.2 8.4E-06 2.9E-10   73.1  11.2   76   35-117    35-120 (397)
266 3ats_A Putative uncharacterize  98.1 8.1E-06 2.8E-10   72.0   8.2   84   35-120    25-121 (357)
267 2q83_A YTAA protein; 2635576,   97.9 9.3E-05 3.2E-09   64.6  11.4   31  156-186   222-252 (346)
268 3f7w_A Putative fructosamine-3  97.9 7.9E-05 2.7E-09   63.6  10.3   80   30-119    15-97  (288)
269 3jr1_A Putative fructosamine-3  97.7 0.00038 1.3E-08   60.0  12.3   76   34-119    40-118 (312)
270 2yle_A Protein spire homolog 1  97.7 0.00037 1.3E-08   56.0  10.1  103  117-244    33-135 (229)
271 2pyw_A Uncharacterized protein  97.6 0.00031 1.1E-08   63.3  10.4   30  157-187   233-262 (420)
272 2ppq_A HSK, HK, homoserine kin  97.6  0.0014 4.7E-08   56.6  13.9  167   16-186     3-217 (322)
273 3dxq_A Choline/ethanolamine ki  97.4 0.00045 1.6E-08   59.2   8.7   71   35-119    23-95  (301)
274 1zyl_A Hypothetical protein YI  97.4  0.0026 8.9E-08   55.0  13.3  102   14-118     5-113 (328)
275 3feg_A Choline/ethanolamine ki  97.2 0.00092 3.1E-08   59.2   8.3  142   35-186    55-254 (379)
276 3csv_A Aminoglycoside phosphot  97.0  0.0079 2.7E-07   52.1  11.9   31  156-186   183-217 (333)
277 1nw1_A Choline kinase (49.2 KD  97.0  0.0017   6E-08   58.6   7.7   73   35-118    78-158 (429)
278 2qg7_A Ethanolamine kinase PV0  96.9  0.0034 1.2E-07   57.1   9.1   75   35-119   113-188 (458)
279 3c5i_A Choline kinase; choline  96.8  0.0021 7.3E-08   56.7   6.5   74   35-118    38-120 (369)
280 3f2s_A CK, chetk-alpha, cholin  96.3   0.023 7.9E-07   50.5  10.1   31  156-186   244-280 (401)
281 3i1a_A Spectinomycin phosphotr  95.8   0.062 2.1E-06   46.6  10.2   31  156-186   206-236 (339)
282 3mes_A Choline kinase; malaria  94.9    0.12 4.1E-06   46.3   9.3   75   35-119    75-157 (424)
283 3g15_A CK, chetk-alpha, cholin  94.0   0.032 1.1E-06   49.8   3.5   30  157-186   245-280 (401)
284 4ann_A ESSB; membrane protein,  88.1     1.5 5.3E-05   34.9   7.0  116   85-247    43-159 (215)
285 3cxl_A N-chimerin; SH2, RHO-GA  85.6    0.09 3.1E-06   47.8  -1.6   61   33-96    145-213 (463)
286 4ano_A ESSB; membrane protein,  81.9     2.6 8.9E-05   33.7   5.6  103  104-247    60-164 (219)
287 2y3a_A Phosphatidylinositol-4,  48.7      43  0.0015   33.7   7.5   25  161-185   940-964 (1092)
288 3hhm_A Phosphatidylinositol-4,  42.9      62  0.0021   32.5   7.5   25  161-185   937-961 (1091)
289 2wxf_A Phosphatidylinositol-4,  39.7      54  0.0018   32.4   6.6   25  161-185   788-812 (940)
290 3ls8_A Phosphatidylinositol 3-  36.9 2.6E+02   0.009   26.0  14.3   25  161-185   477-501 (614)
291 1e7u_A Phosphatidylinositol 3-  35.4      54  0.0019   32.5   5.8   25  161-185   804-828 (961)
292 2x6h_A GH13170P, VPS34, phosph  30.3      33  0.0011   32.6   3.2   25  161-185   551-575 (696)
293 3eps_A Isocitrate dehydrogenas  29.5 2.7E+02  0.0094   25.5   8.8  140   37-188   313-483 (578)
294 1kq8_A HFH-1, hepatocyte nucle  28.8      33  0.0011   23.5   2.3   29  296-324     9-37  (100)
295 3bpy_A FORK head domain, forkh  28.7      22 0.00075   23.5   1.3   29  296-324    12-40  (85)
296 3oja_A Leucine-rich immune mol  25.8     4.5 0.00015   36.7  -3.4   28   71-98    323-350 (487)
297 2hdc_A Protein (transcription   25.3      35  0.0012   23.2   1.8   29  296-324     9-37  (97)
298 1vtn_C HNF-3/FORK head DNA-rec  24.6      35  0.0012   23.4   1.8   29  296-324    10-38  (102)
299 4gqc_A Thiol peroxidase, perox  24.0      52  0.0018   24.4   2.9   25  303-327   139-163 (164)
300 2hfh_A Genesis, HFH-2; HNF-3 h  23.4      36  0.0012   23.7   1.6   28  297-324    11-38  (109)
301 3coa_C Forkhead box protein O1  22.6      40  0.0014   23.8   1.8   29  296-324    18-46  (117)
302 3l2c_A Forkhead box protein O4  22.5      33  0.0011   24.0   1.3   29  296-324    31-59  (110)
303 2a07_F Forkhead box protein P2  21.7      35  0.0012   23.0   1.3   28  297-324    11-38  (93)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=4.9e-59  Score=404.07  Aligned_cols=261  Identities=22%  Similarity=0.379  Sum_probs=212.1

Q ss_pred             cCCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ++|.+.++||+|+||+||+|++.     .++..||||+++.......+.+.+|+.++++++|||||+++++|.     +.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~   87 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG   87 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----eC
Confidence            47999999999999999999874     357889999998777777788999999999999999999999964     45


Q ss_pred             ceeeEEEeecCCCCHHHHHHhcc-----------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSN-----------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD  173 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~  173 (331)
                      +..++|||||++|+|.+++....           ...+++..+..++.|++.||.|||++   +|+||||||+|||++.+
T Consensus        88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~  164 (299)
T 4asz_A           88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN  164 (299)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence            67899999999999999997632           34688899999999999999999999   99999999999999999


Q ss_pred             CcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCc
Q 046639          174 IVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEG  252 (331)
Q Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~  252 (331)
                      +.+||+|||+|+.....      ..........||+.|+|||++.+..|+.++|||||||++|||+| |..||.+.... 
T Consensus       165 ~~~Ki~DFGla~~~~~~------~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-  237 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYST------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-  237 (299)
T ss_dssp             GCEEECCCSCHHHHTGG------GCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred             CcEEECCcccceecCCC------CceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            99999999999875211      11112223468999999999999999999999999999999998 99999764321 


Q ss_pred             chHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          253 LTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ...........+                    ..+..|+..+.+|+.+||+.||++|||+.+|.+.|+.+.++
T Consensus       238 ~~~~~i~~~~~~--------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          238 EVIECITQGRVL--------------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHHHHHTCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCC--------------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            111111111110                    11234677899999999999999999999999999988764


No 2  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=2.8e-59  Score=411.35  Aligned_cols=251  Identities=20%  Similarity=0.276  Sum_probs=203.7

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ++|.+++.||+|+||+||+|++..+++.||||++...  .....+.+.+|+.++++++|||||++++++     .+.+.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCEE
Confidence            5899999999999999999999999999999999754  344457789999999999999999999995     456789


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      |+|||||+||+|.+++....+..+++..++.++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+|+..
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            9999999999999999877666678889999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ..        .........||+.|+|||++.+..|+.++|||||||++|||++|..||..... ...+........+   
T Consensus       176 ~~--------~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i~~~~~~---  243 (350)
T 4b9d_A          176 NS--------TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVLKIISGSFP---  243 (350)
T ss_dssp             CH--------HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCC---
T ss_pred             cC--------CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcCCCC---
Confidence            11        11122345799999999999999999999999999999999999999975321 1112222221111   


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            .           ....++..+.+|+.+||+.||++|||+.|+++
T Consensus       244 ------~-----------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          244 ------P-----------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ------C-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------C-----------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  0           11234567899999999999999999999985


No 3  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1e-58  Score=407.14  Aligned_cols=250  Identities=20%  Similarity=0.300  Sum_probs=208.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeE
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAI  109 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~l  109 (331)
                      ..|.++++||+|+||+||+|+++.+++.||||++........+.+.+|+.+|+.++|||||++++++     .+.+.+|+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i  148 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV  148 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEE
Confidence            4699999999999999999999999999999999866655566788999999999999999999995     44578999


Q ss_pred             EEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccccc
Q 046639          110 VFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG  189 (331)
Q Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~  189 (331)
                      |||||++|+|.+++.+.   .+++..+..++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       149 vmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          149 VMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             EECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            99999999999999763   378899999999999999999999   999999999999999999999999999987521


Q ss_pred             CCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhh
Q 046639          190 YEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVME  269 (331)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  269 (331)
                              .........||+.|+|||++.+..|+.++|||||||++|||++|.+||.+...  ......+....+     
T Consensus       223 --------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~-----  287 (346)
T 4fih_A          223 --------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP-----  287 (346)
T ss_dssp             --------SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSC-----
T ss_pred             --------CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCC-----
Confidence                    11223456799999999999999999999999999999999999999975311  111111111111     


Q ss_pred             hcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          270 IVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                         +..         .....+++.+.+|+.+||+.||++|||+.|+++
T Consensus       288 ---~~~---------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          288 ---PRL---------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             ---CCC---------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CCC---------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               110         112345678899999999999999999999975


No 4  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=4.6e-58  Score=403.23  Aligned_cols=261  Identities=23%  Similarity=0.384  Sum_probs=207.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ++|.+.++||+|+||+||+|++.     .+++.||||+++..+....+.+.+|+.++++++|||||+++++|.     ..
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-----EG  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----EC
Confidence            46888899999999999999864     367899999998777777788999999999999999999999964     45


Q ss_pred             ceeeEEEeecCCCCHHHHHHhcc-------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSN-------------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD  171 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~  171 (331)
                      +..++|||||++|+|.+++....             ...+++..+..++.|++.||.|||++   +|+||||||+|||++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~  192 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG  192 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence            67899999999999999997642             23578899999999999999999999   999999999999999


Q ss_pred             CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccC
Q 046639          172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFN  250 (331)
Q Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~  250 (331)
                      .++.+||+|||+|+.....      ..........||+.|+|||++.+..++.++|||||||++|||+| |..||.....
T Consensus       193 ~~~~~Ki~DFGla~~~~~~------~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~  266 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYST------DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN  266 (329)
T ss_dssp             TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred             CCCcEEEcccccceeccCC------CcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999999865221      11122234568999999999999999999999999999999999 9999976422


Q ss_pred             CcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          251 EGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      .  .....+....        .+           ..+..|++.+.+|+.+||+.||++|||+.||++.|+.+.++
T Consensus       267 ~--~~~~~i~~g~--------~~-----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          267 T--EAIDCITQGR--------EL-----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             H--HHHHHHHHTC--------CC-----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             H--HHHHHHHcCC--------CC-----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            1  1111111100        00           12234677899999999999999999999999999998765


No 5  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=3.8e-58  Score=398.63  Aligned_cols=263  Identities=25%  Similarity=0.394  Sum_probs=206.8

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      +++.+.++||+|+||+||+|++..   .||||+++..  +....+.+.+|+.++++++|||||+++++|..      +.+
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~~  106 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DNL  106 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------CeE
Confidence            578899999999999999998753   4899998643  34456789999999999999999999998632      357


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||||++|+|.+++.... ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+|+..
T Consensus       107 ~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          107 AIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             EEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred             EEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence            99999999999999997643 3478899999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCC---CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMG---SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....      .........||+.|+|||++.+   +.|+.++|||||||++|||++|..||.+..... .....+.....
T Consensus       183 ~~~~------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~  255 (307)
T 3omv_A          183 SRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYA  255 (307)
T ss_dssp             -----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCC
T ss_pred             ccCC------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCC
Confidence            2211      1122334579999999999864   468999999999999999999999997643221 12222211111


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                             .|..        .....+|+..+.+|+.+||+.||++|||+.+|++.|+.++..+-
T Consensus       256 -------~p~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          256 -------SPDL--------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             -------CCCS--------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             -------CCCc--------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence                   1110        12223567889999999999999999999999999999887763


No 6  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.6e-58  Score=403.47  Aligned_cols=264  Identities=20%  Similarity=0.214  Sum_probs=212.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..+.|.+.++||+|+||+||+|++..+++.||||+++....     ..+|+.+++.++|||||++++++     .+.+.+
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~  125 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAV-----REGPWV  125 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEE-----EECCEE
Confidence            34568888999999999999999999999999999975432     24699999999999999999995     445789


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC-cEEEcccCcccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI-VAHVGDLGLAKF  186 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~-~~kl~Dfg~a~~  186 (331)
                      ++|||||+||+|.+++++.+  .+++..+..++.|++.||.|||++   +|+||||||+|||++.+| .+||+|||+|+.
T Consensus       126 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~  200 (336)
T 4g3f_A          126 NIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALC  200 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred             EEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence            99999999999999997654  478899999999999999999999   999999999999999988 699999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      +......   ..........||+.|+|||++.+..|+.++|||||||++|||++|.+||....... ....+.....+  
T Consensus       201 ~~~~~~~---~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~--  274 (336)
T 4g3f_A          201 LQPDGLG---KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPPP--  274 (336)
T ss_dssp             C---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCCG--
T ss_pred             ccCCCcc---cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCCC--
Confidence            6322111   11112234579999999999999999999999999999999999999998653332 22222221111  


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      ..                ..+..+++.+.+|+.+||+.||.+|||+.||++.|..+.+...+
T Consensus       275 ~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~  320 (336)
T 4g3f_A          275 IR----------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG  320 (336)
T ss_dssp             GG----------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred             ch----------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence            00                11234567889999999999999999999999999888776543


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=2.1e-57  Score=391.26  Aligned_cols=251  Identities=26%  Similarity=0.373  Sum_probs=201.2

Q ss_pred             CC-CcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           31 NF-SPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        31 ~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      +| ++.++||+|+||+||+|.+..++..||+|.+...  .....+.+.+|+.++++++|||||+++++|... ......+
T Consensus        26 r~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~  104 (290)
T 3fpq_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI  104 (290)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEE
T ss_pred             ceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEE
Confidence            44 6777899999999999999999999999998644  334456789999999999999999999997543 2335678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEec-CCCcEEEcccCcc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLD-QDIVAHVGDLGLA  184 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~-~~~~~kl~Dfg~a  184 (331)
                      ++|||||++|+|.+++.+..  .+++..+..++.|++.||+|||++   +  |+||||||+|||++ .+|.+||+|||+|
T Consensus       105 ~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla  179 (290)
T 3fpq_A          105 VLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence            99999999999999997644  477899999999999999999998   7  99999999999997 4799999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      +...          ........||+.|+|||++.+ .|+.++|||||||++|||++|..||.+..............   
T Consensus       180 ~~~~----------~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~---  245 (290)
T 3fpq_A          180 TLKR----------ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG---  245 (290)
T ss_dssp             GGCC----------TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT---
T ss_pred             EeCC----------CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC---
Confidence            7531          123345679999999999875 69999999999999999999999997532211111111100   


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            ..+.          .+...+++.+.+|+.+||+.||++|||+.|+++
T Consensus       246 ------~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          246 ------VKPA----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ------CCCG----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------CCCC----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  0110          111234557889999999999999999999975


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.1e-58  Score=401.26  Aligned_cols=249  Identities=21%  Similarity=0.314  Sum_probs=207.1

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ++|.+++.||+|+||+||+|++..+++.||||++...   +....+.+.+|+.+++.++||||++++++     +.+.+.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence            4699999999999999999999999999999999743   23345678999999999999999999999     455678


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      +|+|||||+||+|.+++.+.+  .+++..+..++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+|+.
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKV  181 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCcee
Confidence            999999999999999997654  478899999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      +...      .........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.. ....+..+.....   
T Consensus       182 ~~~~------~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~~---  251 (311)
T 4aw0_A          182 LSPE------SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-EGLIFAKIIKLEY---  251 (311)
T ss_dssp             CCTT------TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCC---
T ss_pred             cCCC------CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCC---
Confidence            6221      11223345679999999999999999999999999999999999999997531 1111222221111   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                                        .++..+++.+.+|+.+||+.||++|||+.|++
T Consensus       252 ------------------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 ------------------DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             ------------------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             ------------------CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                              11223456788999999999999999999864


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=2.6e-57  Score=407.71  Aligned_cols=250  Identities=20%  Similarity=0.300  Sum_probs=208.5

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeE
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAI  109 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~l  109 (331)
                      +.|.++++||+|+||+||+|++..+++.||||++........+.+.+|+.+|+.++|||||++++++     ...+.+|+
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i  225 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV  225 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence            5699999999999999999999999999999999876655566789999999999999999999995     44578999


Q ss_pred             EEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccccc
Q 046639          110 VFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG  189 (331)
Q Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~  189 (331)
                      |||||+||+|.+++...   .+++..+..++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus       226 VmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          226 VMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             EEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             EEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            99999999999999754   378899999999999999999999   999999999999999999999999999987522


Q ss_pred             CCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhh
Q 046639          190 YEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVME  269 (331)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  269 (331)
                              ........+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+..  .......+....+     
T Consensus       300 --------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~-----  364 (423)
T 4fie_A          300 --------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP-----  364 (423)
T ss_dssp             --------SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC-----
T ss_pred             --------CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC-----
Confidence                    1123345679999999999999999999999999999999999999997532  1111111111111     


Q ss_pred             hcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          270 IVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                         +.+         .....++..+.+|+.+||+.||++|||+.|+++
T Consensus       365 ---~~~---------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          365 ---PRL---------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             ---CCC---------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CCC---------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               111         111234567899999999999999999999976


No 10 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.2e-57  Score=389.49  Aligned_cols=246  Identities=24%  Similarity=0.371  Sum_probs=191.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ++|.+++.||+|+||+||+|++..+++.||+|++...   .......+.+|+.+++.++||||++++++     +.+.+.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECCE
Confidence            5899999999999999999999999999999999644   23345678999999999999999999999     455678


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      +++||||+ +|+|.+++.+..  .+++..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+|+.
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~  161 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI  161 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred             EEEEEeCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCee
Confidence            99999999 789999997654  478899999999999999999999   999999999999999999999999999986


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ...         ........||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+... ...+.......   
T Consensus       162 ~~~---------~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~~~~i~~~~---  228 (275)
T 3hyh_A          162 MTD---------GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVLFKNISNGV---  228 (275)
T ss_dssp             ----------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTC---
T ss_pred             cCC---------CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCC---
Confidence            521         122334679999999999998886 6899999999999999999999975311 11111111111   


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                        ..++..+++.+.+|+.+||+.||++|||+.|+++
T Consensus       229 ------------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          229 ------------------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             ------------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                              0111234567889999999999999999999986


No 11 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.9e-57  Score=394.58  Aligned_cols=257  Identities=23%  Similarity=0.355  Sum_probs=206.4

Q ss_pred             CCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           31 NFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ++++.++||+|+||+||+|.+.     .+++.||||.++... ....+.+.+|+.++++++|||||+++++|.     ..
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~  101 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KD  101 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----EC
Confidence            5778899999999999999864     367889999996443 334567999999999999999999999964     34


Q ss_pred             ceeeEEEeecCCCCHHHHHHhcc--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSN--------------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL  170 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv  170 (331)
                      +..++|||||++|+|.+++....              ...+++..+..++.|++.||.|||++   +|+||||||+|||+
T Consensus       102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl  178 (308)
T 4gt4_A          102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV  178 (308)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence            56899999999999999996532              23477889999999999999999999   99999999999999


Q ss_pred             cCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCccc
Q 046639          171 DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMF  249 (331)
Q Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~  249 (331)
                      +.++.+||+|||+|+.....      ..........||+.|+|||++.++.|+.++|||||||++|||+| |..||.+..
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~------~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~  252 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAA------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS  252 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGG------GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred             CCCCCEEECCcccceeccCC------CceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999875321      11122334568999999999999999999999999999999998 899997643


Q ss_pred             CCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          250 NEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                      .  ......+...            ...       ..+.+|+..+.+|+.+||+.||++|||+.+|++.|+..
T Consensus       253 ~--~~~~~~i~~~------------~~~-------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          253 N--QDVVEMIRNR------------QVL-------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             H--HHHHHHHHTT------------CCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             H--HHHHHHHHcC------------CCC-------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            2  1111111110            000       12235678899999999999999999999999999864


No 12 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.8e-56  Score=396.11  Aligned_cols=265  Identities=20%  Similarity=0.301  Sum_probs=213.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCC-----CceEEEEEeeccc-hhhHHHHHHHHHHHHcCCC-CCcceeeceeecccC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDES-----RSIVAVKVVNLKQ-KEASRSFAAECNALRNIRH-RNLIKIITICSSIDF  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~  101 (331)
                      .++|.+++.||+|+||+||+|.+..+     ++.||||.+.... ....+.+.+|+.++++++| ||||+++++|.    
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~----  138 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----  138 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE----
Confidence            46899999999999999999997643     4679999986543 3345679999999999975 89999999973    


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhcc--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSN--------------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN  167 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~n  167 (331)
                      ...+.+++|||||++|+|.++++...              ...+++..+..++.|++.||.|||++   +|+||||||+|
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~N  215 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN  215 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccc
Confidence            33456899999999999999997632              23477889999999999999999999   99999999999


Q ss_pred             EEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCC
Q 046639          168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD  246 (331)
Q Consensus       168 ilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~  246 (331)
                      ||++.++.+||+|||+|+......      .........||+.|+|||++.+..|+.++|||||||++|||+| |..||.
T Consensus       216 ILl~~~~~vKi~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~  289 (353)
T 4ase_A          216 ILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  289 (353)
T ss_dssp             EEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             eeeCCCCCEEECcchhhhhcccCC------CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence            999999999999999998652211      1112234568999999999999999999999999999999998 999998


Q ss_pred             cccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          247 AMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      +..... .+...+.....        +           ..+..+++.+.+|+.+||+.||++|||+.+|++.|+.+.++-
T Consensus       290 ~~~~~~-~~~~~i~~g~~--------~-----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          290 GVKIDE-EFCRRLKEGTR--------M-----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             TCCCSH-HHHHHHHHTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             CCCHHH-HHHHHHHcCCC--------C-----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence            653322 22222211110        0           112245678999999999999999999999999999987653


No 13 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=8.1e-56  Score=386.08  Aligned_cols=275  Identities=20%  Similarity=0.248  Sum_probs=204.0

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeE
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAI  109 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~l  109 (331)
                      ++|.+.++||+|+||+||+|++  +++.||||+++.... .......|+..+.+++||||++++++|...+ .....+++
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l   78 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence            5688999999999999999998  478999999964432 2233445667777889999999999986532 22346799


Q ss_pred             EEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          110 VFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH-----CQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-----~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ||||+++|+|.++++..   .+++..+..++.|++.||+|||++     ..++|+||||||+|||++.++.+||+|||+|
T Consensus        79 V~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            99999999999999764   377889999999999999999975     2348999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCC------CCccchhhHhHHHHHHHHHhCCCCCCcccCCcc-----
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL-----  253 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----  253 (331)
                      +.......    ..........||+.|+|||++.+.      .++.++|||||||++|||++|.+||........     
T Consensus       156 ~~~~~~~~----~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~  231 (303)
T 3hmm_A          156 VRHDSATD----TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             EEEETTTT----EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             ccccCCCC----ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence            87632211    111222345799999999998764      467899999999999999999887754322111     


Q ss_pred             -----hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          254 -----TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       254 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                           ..........        ...+...++..  ....++...+.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus       232 ~~~~~~~~~~~~~~~--------~~~~rp~~p~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          232 VPSDPSVEEMRKVVC--------EQKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCSSCCHHHHHHHHT--------TSCCCCCCCGG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccccchHHHHHHHHh--------cccCCCCCCcc--ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence                 1111111111        11111111110  11235778899999999999999999999999999998764


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=8e-57  Score=389.45  Aligned_cols=243  Identities=21%  Similarity=0.260  Sum_probs=192.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeec---CCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILD---ESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ++|.+++.||+|+||+||+|++.   .+++.||+|+++...  ......+.+|+.++++++||||+++++++     .+.
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence            57999999999999999999874   467899999996432  22234577899999999999999999995     456


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +.+++|||||+||+|.+++.+..  .+++..+..++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+|
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccc
Confidence            78999999999999999997654  478899999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      +....        .........||+.|+|||++.+..|+.++|||||||++|||++|..||.+... ...+..+..... 
T Consensus       174 ~~~~~--------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i~~~~~-  243 (304)
T 3ubd_A          174 KESID--------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMILKAKL-  243 (304)
T ss_dssp             EC-------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC-
T ss_pred             eeccC--------CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HHHHHHHHcCCC-
Confidence            86421        11223346799999999999999999999999999999999999999975321 111112111110 


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM  312 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~  312 (331)
                                          .++..+++.+.+|+.+||+.||++|||+
T Consensus       244 --------------------~~p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          244 --------------------GMPQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             --------------------CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             --------------------CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence                                1122345678999999999999999995


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.3e-55  Score=380.63  Aligned_cols=262  Identities=22%  Similarity=0.349  Sum_probs=192.0

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-hhHHHHHHHHHHHHcCCCCCcceeeceeecccC-------
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITICSSIDF-------  101 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------  101 (331)
                      ++|.+++.||+|+||+||+|+++.+++.||||++..... ...+.+.+|+.++++++|||||++++++...+.       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            469999999999999999999999999999999975543 344678999999999999999999999764321       


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCC-ccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcc
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQ-LRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~D  180 (331)
                      .....+|+|||||++|+|.+++...... ..+...++.++.|++.||.|||++   +|+||||||+|||++.+|.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence            2234579999999999999999864322 233456788999999999999999   999999999999999999999999


Q ss_pred             cCcccccccCCCCCcc----cccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHH
Q 046639          181 LGLAKFLFGYEPGTAA----ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLH  256 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  256 (331)
                      ||+|+.+.........    ..........||+.|+|||++.+..|+.++|||||||++|||++   ||.....   .. 
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~-  234 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RV-  234 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HH-
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HH-
Confidence            9999876432211110    11122334579999999999999999999999999999999995   7753211   11 


Q ss_pred             HHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          257 EFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..+..     +.....|           ....+..+.+.+|+.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~-----~~~~~~p-----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          235 RTLTD-----VRNLKFP-----------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHH-----HHTTCCC-----------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHH-----HhcCCCC-----------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11110     0000001           222345566788999999999999999999986


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.5e-53  Score=379.54  Aligned_cols=277  Identities=19%  Similarity=0.246  Sum_probs=207.1

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecc-cCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~~~  106 (331)
                      ++|.+++.||+|+||+||+|++..+++.||||+++..  .....+.+.+|+.+|+.++||||+++++++... .+...+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999999999999999999643  234456788999999999999999999987543 2445678


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      +|+||||| +|+|.+++...  ..+++..+..++.|++.||.|||++   ||+||||||+|||++.+|.+||+|||+|+.
T Consensus       134 ~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          134 VYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             EEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence            99999999 57899999654  4588899999999999999999999   999999999999999999999999999986


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      +.....    ..........||+.|+|||++.+. .++.++||||+||++|||++|.+||.+.. ....+..+.......
T Consensus       208 ~~~~~~----~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-~~~~l~~I~~~~g~p  282 (398)
T 4b99_A          208 LCTSPA----EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-YVHQLQLIMMVLGTP  282 (398)
T ss_dssp             C-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-HHHHHHHHHHHHCCC
T ss_pred             cccCcc----ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-HHHHHHHHHHhcCCC
Confidence            532111    112233456799999999998875 46999999999999999999999997642 122222222221111


Q ss_pred             h--hhhhcCccc----ccccccCC----cchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 K--VMEIVDPSL----LLEVTANN----YSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~--~~~~~~~~~----~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .  .........    ...+....    ..........+.+|+.+||+.||.+|||+.|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1  000000000    00000000    0111234567889999999999999999999875


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.5e-51  Score=366.83  Aligned_cols=275  Identities=19%  Similarity=0.239  Sum_probs=199.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeec---CCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILD---ESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+.++||+|+||+||+|+++   .+++.||+|.+....  ....+.+|+.+++.+ .||||+++++++     ..
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~~   91 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCF-----RK   91 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEE-----EE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEE-----EE
Confidence            4578999999999999999999874   467899999885443  234578899999998 699999999984     45


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC-CcEEEcccC
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD-IVAHVGDLG  182 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~-~~~kl~Dfg  182 (331)
                      .+.+++||||+++++|.++++.     +++..+..++.|++.||.|||++   ||+||||||+|||++.+ +.+||+|||
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~~-----l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG  163 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG  163 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHTT-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             CCEEEEEEeCCCcccHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence            6789999999999999999842     67889999999999999999999   99999999999999876 799999999


Q ss_pred             cccccccCCCCCc--------------------ccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhC
Q 046639          183 LAKFLFGYEPGTA--------------------AETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTR  241 (331)
Q Consensus       183 ~a~~~~~~~~~~~--------------------~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g  241 (331)
                      +|+..........                    ...........||+.|+|||++.+. .|+.++||||+||++|||++|
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G  243 (361)
T 4f9c_A          164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG  243 (361)
T ss_dssp             TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence            9986532211000                    0011122345799999999999876 489999999999999999999


Q ss_pred             CCCCCcccCCcchHHHHHHhhCcchhh---hhc----------------------------Cccccccccc--CCcchHH
Q 046639          242 RRPTDAMFNEGLTLHEFVKMALPDKVM---EIV----------------------------DPSLLLEVTA--NNYSWIE  288 (331)
Q Consensus       242 ~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~~--~~~~~~~  288 (331)
                      ..||....++...+..+..........   ...                            .+........  .......
T Consensus       244 ~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  323 (361)
T 4f9c_A          244 RYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN  323 (361)
T ss_dssp             CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence            999965443333333332211100000   000                            0000000000  0001112


Q ss_pred             HHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          289 DCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       289 ~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..++.+.+|+.+||+.||.+|||+.|+++
T Consensus       324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          324 EVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            34567889999999999999999999874


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=5e-51  Score=384.14  Aligned_cols=253  Identities=18%  Similarity=0.246  Sum_probs=209.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+++.||+|+||+||+|+++.+++.||+|++........+.+.+|+.+|+.++||||++++++     +.+...++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~  230 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMV  230 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEE
Confidence            3689999999999999999999999999999999987766667788999999999999999999999     45567899


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC--CcEEEcccCcccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD--IVAHVGDLGLAKF  186 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~--~~~kl~Dfg~a~~  186 (331)
                      +|||||+||+|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+|||++.+  +.+||+|||+|+.
T Consensus       231 iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  306 (573)
T ss_dssp             EEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred             EEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence            9999999999999996533 3478899999999999999999999   99999999999999854  8999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      +.         .........||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+... ...+..+......  
T Consensus       307 ~~---------~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-~~~~~~i~~~~~~--  374 (573)
T 3uto_A          307 LD---------PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-DETLRNVKSCDWN--  374 (573)
T ss_dssp             CC---------TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCCC--
T ss_pred             cc---------CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHhCCCC--
Confidence            62         12233456799999999999999999999999999999999999999975421 1111111111100  


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                          ...           .....++..+.+|+.+||+.||.+|||+.|+++
T Consensus       375 ----~~~-----------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          375 ----MDD-----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             ----CCS-----------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----CCc-----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                000           111234567889999999999999999999986


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5.6e-51  Score=382.55  Aligned_cols=249  Identities=22%  Similarity=0.254  Sum_probs=199.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhH---HHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEAS---RSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+++.||+|+||+||+|++..+++.||||++....   ....   .....++.+++.++||||++++++     +.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~  262 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FH  262 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EE
Confidence            467999999999999999999999999999999996432   1111   223344667778899999999999     55


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      +.+.+|+||||++||+|.+++.+.+  .+++..+..++.||+.||.|||++   ||+||||||+|||++.+|.+||+|||
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFG  337 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG  337 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccc
Confidence            6678999999999999999997654  478899999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      +|+.+..          ......+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+......  ......
T Consensus       338 lA~~~~~----------~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~  405 (689)
T 3v5w_A          338 LACDFSK----------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM  405 (689)
T ss_dssp             TCEECSS----------CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHH
T ss_pred             eeeecCC----------CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHh
Confidence            9987521          12234579999999999975 5799999999999999999999999976433221  111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCc-----HHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERME-----MRDVV  316 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-----~~~i~  316 (331)
                      ....      .           ..++..+++.+.+|+.+||+.||.+|++     +.||+
T Consensus       406 i~~~------~-----------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          406 TLTM------A-----------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHC------C-----------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             hcCC------C-----------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            1000      0           0122234567899999999999999998     56664


No 20 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=4.8e-49  Score=345.66  Aligned_cols=268  Identities=21%  Similarity=0.334  Sum_probs=216.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++.     ..+..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCCeeE
Confidence            357999999999999999999999999999999987666777788999999999999999999999964     356789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.... ..+++..+..++.|++.||+|||++   +++|+||||+||+++.++.+||+|||++....
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV  159 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence            9999999999999998643 3477889999999999999999999   99999999999999999999999999998763


Q ss_pred             cCCCCCc------ccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch----HHHH
Q 046639          189 GYEPGTA------AETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT----LHEF  258 (331)
Q Consensus       189 ~~~~~~~------~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~~~  258 (331)
                      .......      ...........||+.|+|||++.+..++.++||||||+++|+|++|..||.........    ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~  239 (310)
T 3s95_A          160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF  239 (310)
T ss_dssp             --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH
T ss_pred             cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc
Confidence            3221110      00111112456899999999999999999999999999999999999998754332211    1111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      .....                       ...++..+.+++.+||+.||++|||+.++++.|+.+...+.+
T Consensus       240 ~~~~~-----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          240 LDRYC-----------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             HHHTC-----------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccC-----------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence            11110                       123445688999999999999999999999999999887654


No 21 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=8.7e-49  Score=341.90  Aligned_cols=252  Identities=20%  Similarity=0.252  Sum_probs=207.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++.     ..+..
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-----ECCEE
Confidence            3568999999999999999999999999999999997666666677899999999999999999999854     35678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++||||+++++|.+++...   .++...+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++...
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            9999999999999999764   367788999999999999999999   9999999999999999999999999998765


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ...        ........||+.|+|||++.+..++.++||||||+++|+|++|..||....... ..........+   
T Consensus       167 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~---  234 (297)
T 3fxz_A          167 TPE--------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP---  234 (297)
T ss_dssp             CST--------TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSC---
T ss_pred             CCc--------ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC---
Confidence            211        122334568999999999999999999999999999999999999997532111 11111111100   


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            ..         .....++..+.+|+.+||+.||++|||+.++++
T Consensus       235 ------~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          235 ------EL---------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             ------CC---------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------CC---------CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                  00         112235567899999999999999999999975


No 22 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=6.9e-49  Score=346.83  Aligned_cols=255  Identities=20%  Similarity=0.264  Sum_probs=205.7

Q ss_pred             HHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           22 YAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      ..+.....++|.+.+.||+|+||+||+|.+..+++.||+|++...  +......+.+|+.+++.++||||+++++++   
T Consensus         7 ~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~---   83 (328)
T 3fe3_A            7 CADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI---   83 (328)
T ss_dssp             ----CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             ccccCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence            344445667899999999999999999999999999999999654  344556788999999999999999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                        ...+..++|||++++++|.+++....  .++...+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+
T Consensus        84 --~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~  156 (328)
T 3fe3_A           84 --ETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIA  156 (328)
T ss_dssp             --ECSSEEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred             --EECCEEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEe
Confidence              44577899999999999999997654  377889999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      |||++.....         ........||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+...  ......
T Consensus       157 DFG~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~  225 (328)
T 3fe3_A          157 DFGFSNEFTV---------GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRER  225 (328)
T ss_dssp             STTCCGGGSS---------SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred             eccCceecCC---------CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence            9999976521         122334569999999999988876 4899999999999999999999975321  111111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....                    ....+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       226 i~~~--------------------~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          226 VLRG--------------------KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHC--------------------CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHhC--------------------CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1100                    00111124567889999999999999999999975


No 23 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.2e-48  Score=341.30  Aligned_cols=284  Identities=30%  Similarity=0.475  Sum_probs=225.7

Q ss_pred             ccHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           20 ISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      ++..++....++|.+.+.||+|+||+||+|.+. +++.||+|.+........+.+.+|+.+++.++||||+++++++   
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---  104 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC---  104 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC---
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence            345566678899999999999999999999975 6889999998766666677899999999999999999999994   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhcc--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEE
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH  177 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~k  177 (331)
                        ...+..++|||++++++|.+++....  ...+++..++.++.|++.||.|||++   +++|+||||+||+++.++.+|
T Consensus       105 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k  179 (321)
T 2qkw_B          105 --DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPK  179 (321)
T ss_dssp             --CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEE
T ss_pred             --cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEE
Confidence              45667899999999999999986543  23477889999999999999999999   999999999999999999999


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc-hHH
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL-TLH  256 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~  256 (331)
                      |+|||++.......      .........||+.|+|||++.+..++.++||||||+++|+|++|..||........ ...
T Consensus       180 l~Dfg~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~  253 (321)
T 2qkw_B          180 ITDFGISKKGTELD------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA  253 (321)
T ss_dssp             ECCCTTCEECSSSS------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred             Eeeccccccccccc------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence            99999997642111      11122334588999999999888999999999999999999999999976543322 122


Q ss_pred             HHH-HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          257 EFV-KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       257 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      .+. .......+....++....       ....+++..+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          254 EWAVESHNNGQLEQIVDPNLAD-------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHTHHHHTTTCCCSSSSSSCTT-------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHhhhccccccHHHhcChhhcc-------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            211 111112222222322221       23357888999999999999999999999999999988754


No 24 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=4.7e-48  Score=341.66  Aligned_cols=289  Identities=33%  Similarity=0.536  Sum_probs=227.6

Q ss_pred             hccCCcccHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh-hHHHHHHHHHHHHcCCCCCccee
Q 046639           14 KQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE-ASRSFAAECNALRNIRHRNLIKI   92 (331)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~   92 (331)
                      ......++..++....++|.+.+.||+|+||+||+|.+. +++.||+|++...... ....+.+|+.+++.++||||+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            445677899999999999999999999999999999865 6889999998654322 22358899999999999999999


Q ss_pred             eceeecccCCCcceeeEEEeecCCCCHHHHHHhcc--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe
Q 046639           93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL  170 (331)
Q Consensus        93 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv  170 (331)
                      ++++     ......++|||++++++|.+++....  ...+++..+..++.|++.||.|||+...++++|+||||+||++
T Consensus        93 ~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~  167 (326)
T 3uim_A           93 RGFC-----MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL  167 (326)
T ss_dssp             CEEE-----CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred             EEEE-----ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence            9995     44567799999999999999998743  3347888999999999999999999866689999999999999


Q ss_pred             cCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcc--
Q 046639          171 DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAM--  248 (331)
Q Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--  248 (331)
                      +.++.+||+|||++......       .........||+.|+|||++.+..++.++||||||+++|+|++|..||...  
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  240 (326)
T 3uim_A          168 DEEFEAVVGDFGLAKLMDYK-------DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL  240 (326)
T ss_dssp             CTTCCEEECCCSSCEECCSS-------SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHH
T ss_pred             CCCCCEEeccCccccccCcc-------cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccc
Confidence            99999999999999865211       112223345899999999998888999999999999999999999999632  


Q ss_pred             -cCCcchHHHHHHhhCc-chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          249 -FNEGLTLHEFVKMALP-DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       249 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                       .........+...... .......+....       ..+..++...+.+++.+||+.||.+|||+.+|++.|+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TTTSCSBHHHHHTTTTSSCCSTTSSCTTCT-------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             ccccchhHHHHHHHHhhchhhhhhcChhhc-------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence             1222233333322221 122222222221       134467888999999999999999999999999999753


No 25 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=2.8e-48  Score=338.37  Aligned_cols=279  Identities=22%  Similarity=0.344  Sum_probs=211.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEee----ecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGI----LDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|++++.||+|+||+||+|+    +..+++.||+|++........+.+.+|+.+++.++||||+++++++...   +
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~   84 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---G   84 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---H
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---C
Confidence            34689999999999999999998    5668899999999877777778899999999999999999999986432   2


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++++|.+++..... .+++..++.++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred             CCceEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence            3457999999999999999976532 467888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.......     ..........++..|+|||++.+..++.++||||||+++|+|++|..||......   .........
T Consensus       161 ~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~  232 (295)
T 3ugc_A          161 TKVLPQDK-----EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDK  232 (295)
T ss_dssp             CC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTC
T ss_pred             cccccCCc-----ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCcc
Confidence            98752211     1111222334677799999999999999999999999999999999998643111   111100000


Q ss_pred             cc-----hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          264 PD-----KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      ..     .+........       ....+..++..+.+++.+||+.||++|||+.+|++.|+.+.+.+.|
T Consensus       233 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~g  295 (295)
T 3ugc_A          233 QGQMIVFHLIELLKNNG-------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG  295 (295)
T ss_dssp             CTHHHHHHHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred             ccchhHHHHHHHHhccC-------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhccC
Confidence            00     0000000000       0112234667899999999999999999999999999999988754


No 26 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.5e-47  Score=342.49  Aligned_cols=266  Identities=20%  Similarity=0.323  Sum_probs=211.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeec-------CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceeeceeecc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILD-------ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKIITICSSI   99 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   99 (331)
                      .++|.+.+.||+|+||+||+|++.       .++..||+|+++... ......+.+|+.+++.+ +||||++++++|   
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~---  156 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC---  156 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE---
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence            467999999999999999999874       345679999996543 34456789999999999 899999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccC--------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNG--------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKP  165 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~  165 (331)
                        ...+..++||||+++++|.+++.....              ..+++..++.++.|++.||.|||++   +|+||||||
T Consensus       157 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp  231 (370)
T 2psq_A          157 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA  231 (370)
T ss_dssp             --CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred             --ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence              445678999999999999999986432              3467888999999999999999999   999999999


Q ss_pred             CCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCC
Q 046639          166 SNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRP  244 (331)
Q Consensus       166 ~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~p  244 (331)
                      +||+++.++.+||+|||+++.......      ........+|+.|+|||++.+..++.++||||||+++|||++ |..|
T Consensus       232 ~NIll~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p  305 (370)
T 2psq_A          232 RNVLVTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  305 (370)
T ss_dssp             GGEEECTTCCEEECCCSSCEETTCCCT------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             hhEEECCCCCEEEccccCCcccCcccc------eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999986522111      111222346788999999999999999999999999999999 9999


Q ss_pred             CCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          245 TDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       245 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      |......  .....+.....        +           ..+..++..+.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus       306 ~~~~~~~--~~~~~~~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          306 YPGIPVE--ELFKLLKEGHR--------M-----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             STTCCGG--GHHHHHHTTCC--------C-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCHH--HHHHHHhcCCC--------C-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9764322  12111111100        0           1112456789999999999999999999999999999987


Q ss_pred             hhhcC
Q 046639          325 TFLGT  329 (331)
Q Consensus       325 ~~~~~  329 (331)
                      ...+.
T Consensus       365 ~~~~~  369 (370)
T 2psq_A          365 LTTNE  369 (370)
T ss_dssp             HHC--
T ss_pred             HhccC
Confidence            66543


No 27 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.1e-48  Score=345.71  Aligned_cols=252  Identities=21%  Similarity=0.256  Sum_probs=197.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ...++|.+.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++     ...+
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~   81 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETAN   81 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCC
Confidence            45678999999999999999999999999999999986543 22345688999999999999999999995     4556


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++++++|.+++....  .+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.
T Consensus        82 ~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~  156 (347)
T 3zgw_A           82 KIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA  156 (347)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcc
Confidence            7899999999999999997644  377899999999999999999999   99999999999999999999999999987


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      .....       .........||+.|+|||++.+..+ +.++||||||+++|+|++|..||..... ............ 
T Consensus       157 ~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~-  227 (347)
T 3zgw_A          157 KPKGN-------KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-MALYKKIMRGKY-  227 (347)
T ss_dssp             C---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC-
T ss_pred             cccCC-------CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCC-
Confidence            64211       1122334568999999999998875 8999999999999999999999975311 111111111110 


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                          ..+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       228 --------------------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          228 --------------------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             --------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------------------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence                                111223456788999999999999999999985


No 28 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=9.2e-48  Score=337.21  Aligned_cols=263  Identities=24%  Similarity=0.329  Sum_probs=202.4

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ....++|.+.+.||+|+||+||+|++  ++..||+|++....  ......+.+|+.++++++||||+++++++     ..
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~  105 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQ  105 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CS
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EE
Confidence            34456899999999999999999987  47789999986443  34456788999999999999999999995     44


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccC-CccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEecCCCcEEEcc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNG-QLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~~~~~~kl~D  180 (331)
                      ....++|||++++++|.+++..... ..+++..++.++.|++.||+|||+.   +  ++|+||||+||+++.++.+||+|
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~D  182 (309)
T 3p86_A          106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCD  182 (309)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred             CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECC
Confidence            5678999999999999999976432 2377888999999999999999999   8  99999999999999999999999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHH
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK  260 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  260 (331)
                      ||+++....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||......  .......
T Consensus       183 fg~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~  252 (309)
T 3p86_A          183 FGLSRLKAS--------TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVG  252 (309)
T ss_dssp             CC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHH
T ss_pred             CCCCccccc--------cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH
Confidence            999975411        112233456899999999999999999999999999999999999999754211  1111111


Q ss_pred             hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          261 MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ....       .           ......++..+.+|+.+||+.||.+|||+.+|++.|+.+.+..
T Consensus       253 ~~~~-------~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          253 FKCK-------R-----------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             HSCC-------C-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             hcCC-------C-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            0000       0           0112235567899999999999999999999999999887654


No 29 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1.8e-47  Score=337.75  Aligned_cols=265  Identities=24%  Similarity=0.316  Sum_probs=209.1

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCc---eEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRS---IVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+.+.||+|+||+||+|.+..++.   .||||++... .....+.+.+|+.+++.++||||+++++++     ...
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~  122 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG  122 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence            3578899999999999999999975444   5999999754 344456789999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++.++|+|||++
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  198 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS  198 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             CccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence            67899999999999999997543 3477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ........     .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  ..........
T Consensus       199 ~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~  271 (325)
T 3kul_A          199 RVLEDDPD-----AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGY  271 (325)
T ss_dssp             EECC---------CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTC
T ss_pred             cccccCcc-----ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCC
Confidence            87632111     1111222345778999999998899999999999999999999 99999754221  1111111110


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                              ..           .....++..+.+|+.+||+.||.+|||+.+|++.|+.+.+....
T Consensus       272 --------~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          272 --------RL-----------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             --------CC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             --------CC-----------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence                    00           11123567899999999999999999999999999999876544


No 30 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.1e-47  Score=343.72  Aligned_cols=274  Identities=19%  Similarity=0.296  Sum_probs=216.9

Q ss_pred             ccHHHHHHHhcCCCcCceeeccCeeEEEEee-----ecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCccee
Q 046639           20 ISYAELSKATNNFSPANKIGQGGVSIVYKGI-----LDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKI   92 (331)
Q Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~   92 (331)
                      ++........++|.+.+.||+|+||.||+|.     ...+++.||||++.... ....+.+.+|+.+++.+ .||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            4455555667899999999999999999998     55677899999997543 33446789999999999 79999999


Q ss_pred             eceeecccCCCcceeeEEEeecCCCCHHHHHHhccCC-------------------------------------------
Q 046639           93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ-------------------------------------------  129 (331)
Q Consensus        93 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------------------------------------------  129 (331)
                      ++++.    ......++||||+++++|.+++......                                           
T Consensus        92 ~~~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (359)
T 3vhe_A           92 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF  167 (359)
T ss_dssp             EEEEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred             eeeee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence            99974    3345589999999999999999865421                                           


Q ss_pred             ---------------------ccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          130 ---------------------LRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       130 ---------------------~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                                           .+++..++.++.|++.||+|||++   +|+|+||||+||+++.++.+||+|||++....
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  244 (359)
T 3vhe_A          168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY  244 (359)
T ss_dssp             ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred             ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence                                 277888999999999999999999   99999999999999999999999999998652


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ...      .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||............ .......  
T Consensus       245 ~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~--  315 (359)
T 3vhe_A          245 KDP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRM--  315 (359)
T ss_dssp             SCT------TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-HHHTCCC--
T ss_pred             ccc------cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH-HHcCCCC--
Confidence            211      1122234557888999999998899999999999999999998 99999765333222211 1111100  


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                                       ..+..++..+.+++.+||+.||.+|||+.+|++.|+.+.++-
T Consensus       316 -----------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          316 -----------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             -----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence                             011224567899999999999999999999999999988753


No 31 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=5.7e-47  Score=333.99  Aligned_cols=266  Identities=20%  Similarity=0.240  Sum_probs=213.1

Q ss_pred             hccCCcccHHHHHHHhcC----------CCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHc
Q 046639           14 KQQFPMISYAELSKATNN----------FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN   83 (331)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~   83 (331)
                      -.+.+.++..++..+.+.          |...+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++.
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~   98 (321)
T 2c30_A           19 YFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD   98 (321)
T ss_dssp             ------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred             eecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHh
Confidence            334477888998888765          7788899999999999999998999999999976666566778999999999


Q ss_pred             CCCCCcceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 046639           84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDL  163 (331)
Q Consensus        84 l~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~di  163 (331)
                      ++||||+++++++.     ..+..++||||+++++|.+++...   .+++..+..++.|++.||.|||+.   +++|+||
T Consensus        99 l~h~niv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  167 (321)
T 2c30_A           99 YQHFNVVEMYKSYL-----VGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI  167 (321)
T ss_dssp             CCCTTBCCEEEEEE-----ETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCcceEEEEEE-----ECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            99999999999964     346789999999999999998643   477899999999999999999999   9999999


Q ss_pred             CCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCC
Q 046639          164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRR  243 (331)
Q Consensus       164 k~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~  243 (331)
                      ||+||+++.++.+||+|||++......        ........||+.|+|||++.+..++.++||||||+++|+|++|..
T Consensus       168 kp~NIll~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~  239 (321)
T 2c30_A          168 KSDSILLTLDGRVKLSDFGFCAQISKD--------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP  239 (321)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCSS--------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CHHHEEECCCCcEEEeeeeeeeecccC--------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            999999999999999999998765211        112234568999999999999999999999999999999999999


Q ss_pred             CCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          244 PTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       244 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ||.....  ..........        ..+..         .....++..+.+++.+||+.||++|||+.++++
T Consensus       240 pf~~~~~--~~~~~~~~~~--------~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          240 PYFSDSP--VQAMKRLRDS--------PPPKL---------KNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             TTTTSCH--HHHHHHHHHS--------SCCCC---------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCCH--HHHHHHHhcC--------CCCCc---------CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9965321  1111111111        11111         111234567889999999999999999999986


No 32 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.2e-46  Score=328.91  Aligned_cols=269  Identities=20%  Similarity=0.297  Sum_probs=208.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHc--CCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN--IRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+  +++.||+|++....   ...+..|.+++..  ++||||+++++++... .....
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~   79 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTS-RHSST   79 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCc
Confidence            356899999999999999999988  58899999986442   2344556666665  7899999999987543 24456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeecCCCCCCEEecCCCcEE
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH--------HHCQPSIVHGDLKPSNILLDQDIVAH  177 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH--------~~~~~~ivH~dik~~nilv~~~~~~k  177 (331)
                      ..++|||++++++|.++++..   .+++..++.++.|++.||.|||        +.   +++|+||||+||+++.++.+|
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k  153 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC  153 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred             eeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence            789999999999999999543   4778899999999999999999        87   999999999999999999999


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC------CCccchhhHhHHHHHHHHHhC----------
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR----------  241 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------  241 (331)
                      |+|||++........    ..........||+.|+|||++.+.      .++.++||||||+++|+|++|          
T Consensus       154 l~Dfg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~  229 (301)
T 3q4u_A          154 IADLGLAVMHSQSTN----QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY  229 (301)
T ss_dssp             ECCCTTCEEEETTTT----EEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             EeeCCCeeecccccc----cccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence            999999976532211    111112234689999999999876      556899999999999999999          


Q ss_pred             CCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHH
Q 046639          242 RRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRH  321 (331)
Q Consensus       242 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~  321 (331)
                      ..||......................    .+..      ....+...++..+.+|+.+||+.||.+|||+.+|++.|++
T Consensus       230 ~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          230 KPPFYDVVPNDPSFEDMRKVVCVDQQ----RPNI------PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCC----CCCC------CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccccccCCCCcchhhhhHHHhccCC----CCCC------ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            88887655544444443332211110    1111      0112334678899999999999999999999999999987


Q ss_pred             h
Q 046639          322 A  322 (331)
Q Consensus       322 ~  322 (331)
                      +
T Consensus       300 i  300 (301)
T 3q4u_A          300 I  300 (301)
T ss_dssp             H
T ss_pred             c
Confidence            5


No 33 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=3.7e-46  Score=326.76  Aligned_cols=286  Identities=27%  Similarity=0.429  Sum_probs=224.6

Q ss_pred             hccCCcccHHHHHHHhcCCCcC------ceeeccCeeEEEEeeecCCCceEEEEEeecc----chhhHHHHHHHHHHHHc
Q 046639           14 KQQFPMISYAELSKATNNFSPA------NKIGQGGVSIVYKGILDESRSIVAVKVVNLK----QKEASRSFAAECNALRN   83 (331)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~   83 (331)
                      .+.++.++..++...+++|...      +.||+|+||+||+|.+  +++.||+|.+...    .....+.+.+|+.+++.
T Consensus         9 ~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A            9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             --CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence            4457889999999999998877      8999999999999987  4778999998643    23445778999999999


Q ss_pred             CCCCCcceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhc-cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 046639           84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS-NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD  162 (331)
Q Consensus        84 l~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~d  162 (331)
                      ++||||+++++++     ...+..++|||++++++|.+++... ....+++..++.++.|++.||.+||+.   +++|+|
T Consensus        87 l~h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~d  158 (307)
T 2nru_A           87 CQHENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRD  158 (307)
T ss_dssp             CCCTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             cCCCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCC
Confidence            9999999999995     4456789999999999999999753 334578889999999999999999999   999999


Q ss_pred             CCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCC
Q 046639          163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRR  242 (331)
Q Consensus       163 ik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  242 (331)
                      |||+||+++.++.++|+|||++........      ........||+.|+|||++.+ .++.++||||||+++|+|++|.
T Consensus       159 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~  231 (307)
T 2nru_A          159 IKSANILLDEAFTAKISDFGLARASEKFAQ------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGL  231 (307)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCSCSS------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCC
T ss_pred             CCHHHEEEcCCCcEEEeecccccccccccc------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCC
Confidence            999999999999999999999976522111      111223458999999999875 5889999999999999999999


Q ss_pred             CCCCcccCCcchHHHHHH--hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHH
Q 046639          243 RPTDAMFNEGLTLHEFVK--MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLR  320 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~  320 (331)
                      .||.......... .+..  ......+...+++..        ......++..+.+++.+||+.||.+|||+.+|++.|+
T Consensus       232 ~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~  302 (307)
T 2nru_A          232 PAVDEHREPQLLL-DIKEEIEDEEKTIEDYIDKKM--------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ  302 (307)
T ss_dssp             CSBCTTBSSSBTT-HHHHHHHTTSCCHHHHSCSSC--------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             CCcccCcchHHHH-HHHHHhhhhhhhhhhhccccc--------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            9998654332221 1111  111112222222221        1234567889999999999999999999999999999


Q ss_pred             Hhhhh
Q 046639          321 HARET  325 (331)
Q Consensus       321 ~~~~~  325 (331)
                      .+.++
T Consensus       303 ~l~~s  307 (307)
T 2nru_A          303 EMTAS  307 (307)
T ss_dssp             HHC--
T ss_pred             HHhcC
Confidence            88653


No 34 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.5e-47  Score=336.46  Aligned_cols=284  Identities=20%  Similarity=0.263  Sum_probs=211.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|++.  ++.||||++.... ........|+.+++.++||||+++++++.... ......
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~   97 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDL   97 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceE
Confidence            3468999999999999999999886  7899999996543 33445667999999999999999999976432 223457


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhc-------CCCCeeecCCCCCCEEecCCCcEEEcc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH-------CQPSIVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-------~~~~ivH~dik~~nilv~~~~~~kl~D  180 (331)
                      ++||||+++++|.+++....   +++..++.++.|++.||.|||+.       +..+|+|+||||+||+++.++.+||+|
T Consensus        98 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D  174 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD  174 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred             EEEEecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence            99999999999999997643   77899999999999999999975       123899999999999999999999999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCCC-----CCccchhhHhHHHHHHHHHhCCCCCCcccCCcch-
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-----KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT-  254 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-  254 (331)
                      ||+++.......      ........||+.|+|||++.+.     .++.++||||||+++|+|++|..||......... 
T Consensus       175 Fg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          175 FGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             CCcccccccccC------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            999987632211      1122234689999999998873     5677899999999999999999999865432221 


Q ss_pred             HHHHHHhhCc-chhhhh-cCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          255 LHEFVKMALP-DKVMEI-VDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       255 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      +......... ..+... ..........  .......+...+.+|+.+||+.||++|||+.+|++.|+.+.+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          249 FEEEIGQHPSLEDMQEVVVHKKKRPVLR--DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCC--GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hhhhhccCCchhhhhhhhhcccCCCCcc--ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            1111000000 000000 0000000000  00112356778999999999999999999999999999988653


No 35 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.5e-47  Score=337.86  Aligned_cols=249  Identities=20%  Similarity=0.244  Sum_probs=203.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+++.||+|+||+||+|++..+++.||+|++...   .......+.+|+.+++.++||||+++++++     ...+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCC
Confidence            45799999999999999999999999999999999644   223446688999999999999999999985     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||+++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||+++
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~  153 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK  153 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchh
Confidence            8899999999999999997643  467889999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ............  
T Consensus       154 ~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~--  222 (337)
T 1o6l_A          154 EGIS--------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILMEEI--  222 (337)
T ss_dssp             CSCC--------TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC--
T ss_pred             hccc--------CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-HHHHHHHHcCCC--
Confidence            5311        11223446799999999999999999999999999999999999999975321 111111111100  


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~  317 (331)
                                         .++..++..+.+|+.+||+.||.+||     ++.+|++
T Consensus       223 -------------------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          223 -------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -------------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -------------------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                               11123456789999999999999999     8888864


No 36 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-46  Score=331.63  Aligned_cols=279  Identities=16%  Similarity=0.196  Sum_probs=214.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..   ......
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~   84 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK   84 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceE
Confidence            468999999999999999999999999999999996433 2334667899999999999999999998643   234477


Q ss_pred             eEEEeecCCCCHHHHHHhccC-CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe----cCCCcEEEcccC
Q 046639          108 AIVFEYMQNRNLEQWLRQSNG-QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL----DQDIVAHVGDLG  182 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv----~~~~~~kl~Dfg  182 (331)
                      ++|||++++++|.+++..... ..+++..++.++.|++.||.|||+.   +|+|+||||+||++    +.++.+||+|||
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            999999999999999987432 3378899999999999999999999   99999999999999    788899999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccC--------CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM--------GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      ++.....         ........||+.|+|||++.        +..++.++||||||+++|+|++|..||.........
T Consensus       162 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  232 (319)
T 4euu_A          162 AARELED---------DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN  232 (319)
T ss_dssp             TCEECCT---------TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred             CceecCC---------CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence            9987521         11223356899999999875        567899999999999999999999999754332222


Q ss_pred             ---HHHHHHhhCcchhhhhcCc----ccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          255 ---LHEFVKMALPDKVMEIVDP----SLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       255 ---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                         .........+..+......    .......+............+.+++.+||+.||++|||+.|+++.....
T Consensus       233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence               2222222221111110000    0000011112244567888999999999999999999999999877653


No 37 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.5e-47  Score=333.72  Aligned_cols=263  Identities=22%  Similarity=0.372  Sum_probs=207.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|.+...   .......+.+|+.+++.++||||+++++++     ...+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~   84 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD   84 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence            46899999999999999999999999999999998543   334457789999999999999999999994     4557


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++++++|.+++....  .+++..+..++.|++.||.+||+.   +++|+||||+||+++.++.+||+|||++.
T Consensus        85 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A           85 CYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAK  159 (294)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred             eEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence            7899999999999999997654  477889999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      .....       .........||+.|+|||++.+..++.++||||||+++|+|++|..||......... ........+.
T Consensus       160 ~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~  231 (294)
T 4eqm_A          160 ALSET-------SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHIQDSVPN  231 (294)
T ss_dssp             TC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHHSSCCCC
T ss_pred             ccccc-------cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhhccCCC
Confidence            65211       112223456899999999999999999999999999999999999999753211110 0111000000


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-cHHHHHHHHHHhhhh
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-EMRDVVAKLRHARET  325 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-s~~~i~~~L~~~~~~  325 (331)
                               ...       ....+++..+.+++.+||+.||.+|| +++++.+.|+.+...
T Consensus       232 ---------~~~-------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          232 ---------VTT-------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             ---------HHH-------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             ---------cch-------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence                     000       11123566789999999999999998 999999999887544


No 38 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.6e-47  Score=337.43  Aligned_cols=247  Identities=23%  Similarity=0.329  Sum_probs=202.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ....
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~   82 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPT   82 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence            468999999999999999999999999999999986432   22235688999999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||+ +|+|.+++....  .+++..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++.
T Consensus        83 ~~~lv~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~  156 (336)
T 3h4j_B           83 DIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSN  156 (336)
T ss_dssp             EEEEEECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred             EEEEEEECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccce
Confidence            789999999 789999987644  477889999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....         ........||+.|+|||++.+..+ +.++||||||+++|+|++|..||.......            
T Consensus       157 ~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------------  215 (336)
T 3h4j_B          157 IMTD---------GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN------------  215 (336)
T ss_dssp             TTTT---------SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT------------
T ss_pred             eccC---------CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH------------
Confidence            6521         122334568999999999998876 789999999999999999999997532211            


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                +...+.......+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       216 ----------~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          216 ----------LFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             ----------CBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             ----------HHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                      1111111111223345677899999999999999999999975


No 39 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=6.1e-47  Score=338.30  Aligned_cols=253  Identities=19%  Similarity=0.251  Sum_probs=205.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh------hHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE------ASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      ..++|.+++.||+|+||+||+|++..+++.||+|++......      ..+.+.+|+.+++.++||||+++++++     
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----   84 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-----   84 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----
Confidence            456899999999999999999999999999999999754322      246788999999999999999999995     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC----cEE
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI----VAH  177 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~----~~k  177 (331)
                      ......++|||++++++|.+++...  ..+++..+..++.|++.||.|||++   ||+|+||||+||+++.++    .+|
T Consensus        85 ~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vk  159 (361)
T 2yab_A           85 ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK  159 (361)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred             EeCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEE
Confidence            4557889999999999999999653  3578899999999999999999999   999999999999998777    799


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHH
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHE  257 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  257 (331)
                      |+|||++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||.+.... ..+..
T Consensus       160 l~DFG~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~  229 (361)
T 2yab_A          160 LIDFGLAHEIED---------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLAN  229 (361)
T ss_dssp             ECCCSSCEECCT---------TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHH
T ss_pred             EEecCCceEcCC---------CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence            999999987521         12223456999999999999999999999999999999999999999753211 11111


Q ss_pred             HHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          258 FVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      +......      .+           ..+...++..+.+|+.+||..||.+|||+.++++
T Consensus       230 i~~~~~~------~~-----------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          230 ITAVSYD------FD-----------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHTTCCC------CC-----------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhcCCC------CC-----------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111000      00           0122335567899999999999999999999974


No 40 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.2e-46  Score=329.79  Aligned_cols=265  Identities=24%  Similarity=0.367  Sum_probs=205.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+..   .+|+|+++..  .....+.+.+|+.+++.++||||+++++++.      .+.
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~  105 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN  105 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred             ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCc
Confidence            4589999999999999999998753   4888887643  3445577899999999999999999999853      244


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++..
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~  181 (307)
T 3lb7_A          106 LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred             EEEEEecCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence            789999999999999997543 3577889999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccC---CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGM---GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      .....      .........||+.|+|||++.   +..++.++||||||+++|+|++|..||..................
T Consensus       182 ~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  255 (307)
T 3lb7_A          182 KSRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA  255 (307)
T ss_dssp             ------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCC
T ss_pred             ccccc------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCC
Confidence            42111      112223446899999999985   567899999999999999999999999764332211111111111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      ...+                ......++..+.+|+.+||+.+|++|||+.+|++.|+.+...+..
T Consensus       256 ~~~~----------------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk  304 (307)
T 3lb7_A          256 SPDL----------------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             CCCS----------------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             Ccch----------------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence            1100                111234567899999999999999999999999999999887754


No 41 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.7e-47  Score=344.62  Aligned_cols=262  Identities=24%  Similarity=0.340  Sum_probs=210.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++     ...+.
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~  186 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQP  186 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSSS
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCCC
Confidence            3457999999999999999999999899999999986442 33345688999999999999999999995     34567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++.... ..+++..+..++.|++.||+|||++   +++||||||+||+++.++.+||+|||+++.
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~  262 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE  262 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence            899999999999999997643 3467888999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....      ..........+++.|+|||++.+..++.++||||||+++|||++ |..||.....  ......+..... 
T Consensus       263 ~~~~------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~-  333 (377)
T 3cbl_A          263 EADG------VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFVEKGGR-  333 (377)
T ss_dssp             CTTS------EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHHHTTCC-
T ss_pred             cCCC------ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC-
Confidence            4110      01111112235677999999998899999999999999999998 9999976422  111121111100 


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                                 .       ..+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       334 -----------~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          334 -----------L-------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             -----------C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----------C-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence                       0       11123567889999999999999999999999999998764


No 42 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-46  Score=331.40  Aligned_cols=252  Identities=19%  Similarity=0.259  Sum_probs=205.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.+|+|.+.... .....+.+|+.+++.++||||+++++++     ...+..+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~   77 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESF-----ESMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEE
Confidence            468999999999999999999999999999999987543 3446688999999999999999999995     4456789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC--CCcEEEcccCcccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ--DIVAHVGDLGLAKF  186 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~--~~~~kl~Dfg~a~~  186 (331)
                      +|||++++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.  ++.+||+|||++..
T Consensus        78 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           78 MIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            9999999999999996533 3477889999999999999999999   9999999999999987  78999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ..         .........+|+.|+|||++.+..++.++||||||+++|+|++|..||..... .............. 
T Consensus       154 ~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~-  222 (321)
T 1tki_A          154 LK---------PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYTF-  222 (321)
T ss_dssp             CC---------TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCCC-
T ss_pred             CC---------CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHcCCCCC-
Confidence            52         11223456689999999999998899999999999999999999999975321 11111111111110 


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                           .           ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       223 -----~-----------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          223 -----D-----------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -----C-----------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----C-----------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                 0           0111234667899999999999999999999986


No 43 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.2e-47  Score=335.83  Aligned_cols=254  Identities=20%  Similarity=0.246  Sum_probs=203.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++     ...+..
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~   80 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ   80 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCeE
Confidence            4689999999999999999999999999999999865433 2235688999999999999999999985     445678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++...  ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++..+
T Consensus        81 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             EEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecccee
Confidence            9999999999999998543  3478899999999999999999999   9999999999999999999999999999765


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ....      .........||+.|+|||++.+..+ +.++||||||+++|+|++|..||............+....... 
T Consensus       156 ~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-  228 (323)
T 3tki_A          156 RYNN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-  228 (323)
T ss_dssp             EETT------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-
T ss_pred             ccCC------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-
Confidence            2111      1122234568999999999988775 8899999999999999999999986544333333222111100 


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                        .....+...+.+|+.+||+.||.+|||+.|+++
T Consensus       229 ------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          229 ------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             ------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                              001234567889999999999999999999975


No 44 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=5.5e-47  Score=332.20  Aligned_cols=276  Identities=20%  Similarity=0.247  Sum_probs=206.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-----hhHHHHHHHHHHHHcCC---CCCcceeeceeecc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-----EASRSFAAECNALRNIR---HRNLIKIITICSSI   99 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~   99 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++.....     .......+|+.+++.++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            45789999999999999999999999999999999864321     11245667777777664   99999999998765


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                      ........++|||++ +++|.+++.......+++..+..++.|++.||+|||++   +++|+||||+||+++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECC-CCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhh-hcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence            444445689999999 56999999887666688999999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      |||++....         .........+|+.|+|||++.+..++.++||||||+++|+|++|..||...... .......
T Consensus       163 Dfg~a~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~  232 (308)
T 3g33_A          163 DFGLARIYS---------YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIF  232 (308)
T ss_dssp             SCSCTTTST---------TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHH
T ss_pred             eCccccccC---------CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            999997652         112223456899999999999999999999999999999999999999764221 1222222


Q ss_pred             HhhCcchhhhhcCc------ccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPDKVMEIVDP------SLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..............      ...............++...+.+|+.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            21111100000000      00000000001122245577899999999999999999999975


No 45 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-46  Score=332.08  Aligned_cols=252  Identities=18%  Similarity=0.256  Sum_probs=204.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh------hHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE------ASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++......      ....+.+|+.+++.++||||+++++++     .
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~   84 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----E   84 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence            35799999999999999999999999999999999754321      346788999999999999999999995     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC----cEEE
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI----VAHV  178 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~----~~kl  178 (331)
                      .....++|||++++++|.+++...  ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++    .+||
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl  159 (326)
T 2y0a_A           85 NKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI  159 (326)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence            456789999999999999999653  3578899999999999999999999   999999999999999887    8999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      +|||++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||...... ......
T Consensus       160 ~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~  229 (326)
T 2y0a_A          160 IDFGLAHKIDF---------GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANV  229 (326)
T ss_dssp             CCCTTCEECCT---------TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHH
T ss_pred             EECCCCeECCC---------CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHH
Confidence            99999987521         11223456899999999999999999999999999999999999999653211 111111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......          ..       ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       230 ~~~~~~----------~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          230 SAVNYE----------FE-------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHTCCC----------CC-------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhcCCC----------cC-------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111000          00       0122234567889999999999999999999986


No 46 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-46  Score=334.36  Aligned_cols=269  Identities=22%  Similarity=0.371  Sum_probs=212.0

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeec
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSS   98 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   98 (331)
                      +....++|.+.+.||+|+||.||+|.+.     .+++.||+|++.... ......+.+|+.+++.++||||+++++++  
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--  119 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC--  119 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--
Confidence            3445679999999999999999999986     345899999997543 34456789999999999999999999995  


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhcc----------------------CCccchHHHHHHHHHHHHHHHHHhhcCCC
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSN----------------------GQLRFLTQRVNIAIDVSFAIEYFHHHCQP  156 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~  156 (331)
                         ......++||||+++++|.+++....                      ...+++..++.++.|++.||.|||++   
T Consensus       120 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---  193 (343)
T 1luf_A          120 ---AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---  193 (343)
T ss_dssp             ---CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             ---ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence               44567899999999999999998742                      14578889999999999999999999   


Q ss_pred             CeeecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHH
Q 046639          157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL  236 (331)
Q Consensus       157 ~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~  236 (331)
                      +++|+||||+||+++.++.+||+|||++......      ..........+|+.|+|||++.+..++.++||||||+++|
T Consensus       194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  267 (343)
T 1luf_A          194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW  267 (343)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------GCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             CeecCCCCcceEEECCCCeEEEeecCCCcccccC------ccccccCCCcccceecChhhhccCCcCcccccHHHHHHHH
Confidence            9999999999999999999999999999865211      1112223345788899999998888999999999999999


Q ss_pred             HHHh-CCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHH
Q 046639          237 EMFT-RRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDV  315 (331)
Q Consensus       237 el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i  315 (331)
                      +|++ |..||......  ..........   .     +           .....++..+.+|+.+||+.||.+|||+.+|
T Consensus       268 el~t~g~~p~~~~~~~--~~~~~~~~~~---~-----~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~  326 (343)
T 1luf_A          268 EIFSYGLQPYYGMAHE--EVIYYVRDGN---I-----L-----------ACPENCPLELYNLMRLCWSKLPADRPSFCSI  326 (343)
T ss_dssp             HHHTTTCCTTTTSCHH--HHHHHHHTTC---C-----C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHhcCCCcCCCCChH--HHHHHHhCCC---c-----C-----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence            9999 99999754211  1111111100   0     0           1112355678999999999999999999999


Q ss_pred             HHHHHHhhhhhhc
Q 046639          316 VAKLRHARETFLG  328 (331)
Q Consensus       316 ~~~L~~~~~~~~~  328 (331)
                      ++.|+.+.+...+
T Consensus       327 ~~~L~~~~~~~~~  339 (343)
T 1luf_A          327 HRILQRMCERAEG  339 (343)
T ss_dssp             HHHHHHTTC----
T ss_pred             HHHHHHHHhhhhh
Confidence            9999999877654


No 47 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.3e-46  Score=334.07  Aligned_cols=254  Identities=19%  Similarity=0.248  Sum_probs=202.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-----hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.....     ...+.+.+|+.+++.++||||+++++++     ..
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~   97 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS   97 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence            4579999999999999999999999999999999864321     1346788999999999999999999995     34


Q ss_pred             cceeeEEEeecCCCCHHHHHHhc--cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc---EEE
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV---AHV  178 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~---~kl  178 (331)
                      .+..++|||++++++|.+.+...  .+..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.   +||
T Consensus        98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl  174 (351)
T 3c0i_A           98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKL  174 (351)
T ss_dssp             TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEE
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEE
Confidence            56789999999999999888653  233467888999999999999999999   9999999999999986654   999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      +|||++......        ........||+.|+|||++.+..++.++||||||+++|+|++|..||....  .......
T Consensus       175 ~Dfg~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i  244 (351)
T 3c0i_A          175 GGFGVAIQLGES--------GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI  244 (351)
T ss_dssp             CCCTTCEECCTT--------SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHH
T ss_pred             ecCcceeEecCC--------CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHH
Confidence            999999875211        112234568999999999999999999999999999999999999997531  1111111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .......      .+           .....++..+.+|+.+||+.||++|||+.++++
T Consensus       245 ~~~~~~~------~~-----------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          245 IKGKYKM------NP-----------RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHTCCCC------CH-----------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HcCCCCC------Cc-----------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1111100      00           111234567899999999999999999999985


No 48 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1e-46  Score=327.25  Aligned_cols=263  Identities=24%  Similarity=0.353  Sum_probs=216.4

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+..++..||+|++... ....+.+.+|+.+++.++||||+++++++     ......
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   84 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF   84 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCE
Confidence            456899999999999999999999989999999999744 33456788999999999999999999995     445678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++.......+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++...
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM  161 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence            9999999999999999887767788899999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...       .........+++.|+|||++.+..++.++||||||+++|+|++ |..||.....  ............  
T Consensus       162 ~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~~--  230 (288)
T 3kfa_A          162 TGD-------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYR--  230 (288)
T ss_dssp             CSS-------SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCC--
T ss_pred             cCC-------ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccCC--
Confidence            211       1112223446778999999998899999999999999999999 9999976422  122222211110  


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                            .           .....++..+.+|+.+||+.||.+|||+.++++.|+.+.+...
T Consensus       231 ------~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~  274 (288)
T 3kfa_A          231 ------M-----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS  274 (288)
T ss_dssp             ------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ------C-----------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence                  0           1112345678999999999999999999999999999877643


No 49 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=3.5e-46  Score=341.73  Aligned_cols=255  Identities=16%  Similarity=0.199  Sum_probs=203.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ...++|.+.+.||+|+||+||+|.+..+++.+|+|++....  ......+.+|+.+++.++||||+++++++     ...
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~   82 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEE   82 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECS
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EEC
Confidence            34567999999999999999999999999999999997543  33446789999999999999999999994     456


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec---CCCcEEEccc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDL  181 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~---~~~~~kl~Df  181 (331)
                      +..++|||++++++|.+.+....  .+++..+..++.|++.||.|||++   +|+||||||+||+++   .++.+||+||
T Consensus        83 ~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF  157 (444)
T 3soa_A           83 GHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF  157 (444)
T ss_dssp             SEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred             CEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence            78899999999999999997654  477899999999999999999999   999999999999998   4678999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++......        ........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ..........
T Consensus       158 G~a~~~~~~--------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~  228 (444)
T 3soa_A          158 GLAIEVEGE--------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAG  228 (444)
T ss_dssp             SSCBCCCTT--------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHT
T ss_pred             ceeEEecCC--------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhC
Confidence            999765211        1222345699999999999999999999999999999999999999965321 1111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....     ..            .....+++.+.+|+.+||+.||.+|||+.++++
T Consensus       229 ~~~~-----~~------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          229 AYDF-----PS------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CCCC-----CT------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCC-----Cc------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1100     00            011234567889999999999999999999986


No 50 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.7e-46  Score=336.13  Aligned_cols=250  Identities=20%  Similarity=0.288  Sum_probs=201.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+++.||+|+||+||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ....
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~   88 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE   88 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence            457999999999999999999999999999999986432   23346788999999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++.+++|.+++...  ..++...+..++.|++.||.|||++   ||+||||||+||+++.+|.+||+|||++.
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~  163 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA  163 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence            789999999999999999764  3477889999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCC---CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG---SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ...         .........||+.|+|||++.+   ..++.++||||||+++|+|++|..||.......  ........
T Consensus       164 ~~~---------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~  232 (384)
T 4fr4_A          164 MLP---------RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTF  232 (384)
T ss_dssp             ECC---------TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHH
T ss_pred             ecc---------CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHH
Confidence            652         1122344669999999999874   458999999999999999999999997543222  11111110


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCc-HHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERME-MRDVV  316 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-~~~i~  316 (331)
                      ..                 ....++..++..+.+|+.+||+.||.+||+ +.+|+
T Consensus       233 ~~-----------------~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          233 ET-----------------TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             HH-----------------CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             hh-----------------cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            00                 000112234567899999999999999998 66654


No 51 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.2e-46  Score=343.65  Aligned_cols=254  Identities=27%  Similarity=0.346  Sum_probs=208.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+.  ++.||||+++...  ..+.+.+|+.+++.++||||+++++++..    .....+
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~~  263 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY  263 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCceE
Confidence            467999999999999999999986  6789999996443  45678999999999999999999999743    334689


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.......++...++.++.|++.||.|||++   +++||||||+||+++.++.+||+|||+++...
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            999999999999999886665577888999999999999999999   99999999999999999999999999997541


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      .           ......++..|+|||++.+..++.++||||||+++|||++ |..||.......  ....+....    
T Consensus       341 ~-----------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~----  403 (450)
T 1k9a_A          341 S-----------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGY----  403 (450)
T ss_dssp             -----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTC----
T ss_pred             c-----------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC----
Confidence            1           1112246778999999999999999999999999999998 999998653322  111111110    


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                          ..           ..+..|+..+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus       404 ----~~-----------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          404 ----KM-----------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             ----CC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----CC-----------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence                00           11234677899999999999999999999999999998764


No 52 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=2.7e-47  Score=339.74  Aligned_cols=251  Identities=20%  Similarity=0.237  Sum_probs=198.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFE  102 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  102 (331)
                      ...++|.+++.||+|+||+||+|++..+++.||+|++...   .......+..|..+++.+ +||||+++++++     .
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~   94 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----Q   94 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----E
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----E
Confidence            3456899999999999999999999999999999999743   233446678899999988 699999999995     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      ..+.+++||||+++++|.+++.+..  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||
T Consensus        95 ~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG  169 (353)
T 3txo_A           95 TPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG  169 (353)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccc
Confidence            5567999999999999999997654  477889999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +++...        ..........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...+..+....
T Consensus       170 ~a~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~  240 (353)
T 3txo_A          170 MCKEGI--------CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAILNDE  240 (353)
T ss_dssp             TCBCSC--------C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC
T ss_pred             ceeecc--------cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-HHHHHHHHcCC
Confidence            997531        112233445799999999999988899999999999999999999999975321 11111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH------HHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM------RDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~------~~i~~  317 (331)
                      .                     .++......+.+|+.+||+.||.+||++      .+|++
T Consensus       241 ~---------------------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          241 V---------------------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             C---------------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             C---------------------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            0                     1112245678899999999999999998      66653


No 53 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=7e-47  Score=339.35  Aligned_cols=263  Identities=22%  Similarity=0.320  Sum_probs=207.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeee-----cCCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+.+.||+|+||+||+|.+     ..+++.||||++... .......+.+|+.+++.++||||+++++++     .
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~  144 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L  144 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----e
Confidence            35799999999999999999994     456788999998643 344446688999999999999999999995     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccC-----CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC---
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI---  174 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~---  174 (331)
                      .....++|||++++++|.+++.....     ..+++..++.++.|++.||.|||++   +|+||||||+||+++.++   
T Consensus       145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~  221 (367)
T 3l9p_A          145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR  221 (367)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred             cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence            45667999999999999999987432     3477888999999999999999999   999999999999999555   


Q ss_pred             cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcc
Q 046639          175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGL  253 (331)
Q Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~  253 (331)
                      .+||+|||+++......      .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||.....  .
T Consensus       222 ~~kL~DFG~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~  293 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAG------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--Q  293 (367)
T ss_dssp             CEEECCCHHHHHHHHHS------SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H
T ss_pred             eEEECCCcccccccccc------ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--H
Confidence            59999999998652211      1122233457889999999998899999999999999999998 9999975421  1


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...........        .           .....++..+.+|+.+||+.||.+|||+.+|++.|+.+.+..
T Consensus       294 ~~~~~i~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          294 EVLEFVTSGGR--------M-----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             HHHHHHHTTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHcCCC--------C-----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            11111111100        0           111234567899999999999999999999999999987754


No 54 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=2.1e-46  Score=339.08  Aligned_cols=281  Identities=16%  Similarity=0.129  Sum_probs=209.2

Q ss_pred             HHhcCCCcCceeecc--CeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           27 KATNNFSPANKIGQG--GVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      ...++|.+.+.||+|  +||+||+|++..+++.||+|++....  ......+.+|+.+++.++||||+++++++.     
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----   96 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----   96 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----
Confidence            345689999999999  99999999999999999999997543  444567889999999999999999999954     


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      ..+..++|||++++++|.+++.......+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg  173 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR  173 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGG
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccc
Confidence            456789999999999999999886556688899999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCC--CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHH
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG--SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK  260 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  260 (331)
                      .+.......... ...........||+.|+|||++.+  ..++.++|||||||++|+|++|..||.......... ....
T Consensus       174 ~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~  251 (389)
T 3gni_B          174 SNLSMISHGQRQ-RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLN  251 (389)
T ss_dssp             GCEECEETTEEC-SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC--
T ss_pred             cceeeccccccc-cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhc
Confidence            887653222111 111122233468899999999987  578999999999999999999999997653332221 1111


Q ss_pred             hhCcchhhhhcCc---------------c----------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHH
Q 046639          261 MALPDKVMEIVDP---------------S----------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDV  315 (331)
Q Consensus       261 ~~~~~~~~~~~~~---------------~----------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i  315 (331)
                      ...+........+               .          ...........+...+...+.+|+.+||+.||.+|||+.++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el  331 (389)
T 3gni_B          252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL  331 (389)
T ss_dssp             ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             CCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            1111000000000               0          00000000112334566789999999999999999999999


Q ss_pred             HH
Q 046639          316 VA  317 (331)
Q Consensus       316 ~~  317 (331)
                      ++
T Consensus       332 l~  333 (389)
T 3gni_B          332 LN  333 (389)
T ss_dssp             TT
T ss_pred             hc
Confidence            74


No 55 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=8.8e-47  Score=340.38  Aligned_cols=250  Identities=22%  Similarity=0.275  Sum_probs=198.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+++.||+|+||+||+|++..+++.||+|+++...   ......+..|..++..+ +||||+++++++     ..
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~  124 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QT  124 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----EC
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EE
Confidence            3468999999999999999999999999999999997542   22335578899999887 899999999985     45


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ...+++||||+++++|.+++.+..  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||+
T Consensus       125 ~~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl  199 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM  199 (396)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence            678999999999999999997654  477899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc----hHHHHH
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL----TLHEFV  259 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~~~~  259 (331)
                      ++...        ..........||+.|+|||++.+..++.++||||||+++|+|++|..||........    ......
T Consensus       200 a~~~~--------~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~  271 (396)
T 4dc2_A          200 CKEGL--------RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF  271 (396)
T ss_dssp             CBCCC--------CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH
T ss_pred             eeecc--------cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH
Confidence            97531        112233456799999999999999999999999999999999999999964321111    001111


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM  312 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~  312 (331)
                      ....                 .....++..++..+.+|+.+||+.||.+||++
T Consensus       272 ~~i~-----------------~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          272 QVIL-----------------EKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHH-----------------HCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHh-----------------ccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            1000                 00011222345678899999999999999996


No 56 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.7e-46  Score=336.55  Aligned_cols=268  Identities=21%  Similarity=0.305  Sum_probs=213.6

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecC-------CCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceeeceee
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDE-------SRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKIITICS   97 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   97 (331)
                      ...++|.+.+.||+|+||+||+|.+..       .+..||+|++.... ......+.+|+.+++.+ +||||+++++++ 
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-  144 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-  144 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee-
Confidence            345689999999999999999999753       33579999996543 34457789999999999 899999999995 


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccC--------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG--------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDL  163 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~di  163 (331)
                          ...+..++|||++++++|.+++.....              ..+++..++.++.|++.||.+||+.   +|+|+||
T Consensus       145 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  217 (382)
T 3tt0_A          145 ----TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL  217 (382)
T ss_dssp             ----CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             ----ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence                445678999999999999999987542              3478899999999999999999999   9999999


Q ss_pred             CCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CC
Q 046639          164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RR  242 (331)
Q Consensus       164 k~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~  242 (331)
                      ||+||+++.++.+||+|||+++......      .........+|+.|+|||++.+..++.++||||||+++|+|++ |.
T Consensus       218 kp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~  291 (382)
T 3tt0_A          218 AARNVLVTEDNVMKIADFGLARDIHHID------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG  291 (382)
T ss_dssp             CGGGEEECTTCCEEECSCSCCCCSSCCC------TTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcceEEEcCCCcEEEcccCccccccccc------ccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999998652211      1112223446788999999999999999999999999999999 99


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                      .||.....  ......+....        ..           .....++..+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus       292 ~p~~~~~~--~~~~~~~~~~~--------~~-----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          292 SPYPGVPV--EELFKLLKEGH--------RM-----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             CSSTTCCH--HHHHHHHHTTC--------CC-----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCH--HHHHHHHHcCC--------CC-----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99975421  11111111110        00           11123456789999999999999999999999999999


Q ss_pred             hhhhhcC
Q 046639          323 RETFLGT  329 (331)
Q Consensus       323 ~~~~~~~  329 (331)
                      .......
T Consensus       351 ~~~~~~~  357 (382)
T 3tt0_A          351 VALTSNQ  357 (382)
T ss_dssp             HHHSCSC
T ss_pred             HHHHhcC
Confidence            8776544


No 57 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.3e-46  Score=330.60  Aligned_cols=265  Identities=22%  Similarity=0.327  Sum_probs=212.3

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      ....++|.+.+.||+|+||.||+|.+.     .++..||+|++.... ....+.+.+|+.+++.++||||+++++++   
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~---   95 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC---   95 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE---
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE---
Confidence            344678999999999999999999873     455889999996543 34457789999999999999999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccC----------------------CccchHHHHHHHHHHHHHHHHHhhcCCCC
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNG----------------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPS  157 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~LH~~~~~~  157 (331)
                        ...+..++|||++++++|.+++.....                      ..+++..++.++.|++.||.|||++   +
T Consensus        96 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~  170 (314)
T 2ivs_A           96 --SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K  170 (314)
T ss_dssp             --CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             --ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence              445678999999999999999987432                      3477889999999999999999999   9


Q ss_pred             eeecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHH
Q 046639          158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLE  237 (331)
Q Consensus       158 ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e  237 (331)
                      ++|+||||+||+++.++.++|+|||++.......      .........+++.|+|||++.+..++.++||||||+++|+
T Consensus       171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  244 (314)
T 2ivs_A          171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED------SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  244 (314)
T ss_dssp             EECCCCSGGGEEEETTTEEEECCCTTCEECTTTS------CEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CcccccchheEEEcCCCCEEEccccccccccccc------cceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHH
Confidence            9999999999999999999999999998652211      1111223446788999999988889999999999999999


Q ss_pred             HHh-CCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          238 MFT-RRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       238 l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                      |++ |..||......  ...........        .           .....++..+.+++.+||+.||++|||+.+|+
T Consensus       245 l~t~g~~p~~~~~~~--~~~~~~~~~~~--------~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~  303 (314)
T 2ivs_A          245 IVTLGGNPYPGIPPE--RLFNLLKTGHR--------M-----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADIS  303 (314)
T ss_dssp             HHTTSCCSSTTCCGG--GHHHHHHTTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHhCCCCCCCCCCHH--HHHHHhhcCCc--------C-----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999 99999764322  22222211110        0           11123456789999999999999999999999


Q ss_pred             HHHHHhhhh
Q 046639          317 AKLRHARET  325 (331)
Q Consensus       317 ~~L~~~~~~  325 (331)
                      +.|+.+.+.
T Consensus       304 ~~l~~~~~~  312 (314)
T 2ivs_A          304 KDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            999988764


No 58 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=8.2e-46  Score=341.68  Aligned_cols=271  Identities=19%  Similarity=0.195  Sum_probs=202.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeeccc-CCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSID-FEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~~  105 (331)
                      .++|.+++.||+|+||+||+|.+..+++.||||++...  .......+.+|+.+++.++||||+++++++.... .+...
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46899999999999999999999999999999999644  3445577889999999999999999999975432 23446


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||++ ++|.+.+..    .++...+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus       141 ~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          141 DVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             EEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             eEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            7899999994 567777743    267788999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ...         .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ...+..+.......
T Consensus       213 ~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p  282 (464)
T 3ttj_A          213 TAG---------TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTP  282 (464)
T ss_dssp             -------------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSC
T ss_pred             ecC---------CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCC
Confidence            651         11223346789999999999999999999999999999999999999976421 11222222211110


Q ss_pred             --hhh--------hhcCc----------c-cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 --KVM--------EIVDP----------S-LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 --~~~--------~~~~~----------~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                        ...        .....          . ...................+.+|+.+||+.||++|||+.|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence              000        00000          0 0000111112223344678999999999999999999999985


No 59 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=4.9e-46  Score=323.73  Aligned_cols=270  Identities=19%  Similarity=0.249  Sum_probs=202.8

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ++|.+.+.||+|+||+||+|.+..+++.||+|++....  ......+.+|+.+++.++||||+++++++     ...+..
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence            57999999999999999999999999999999996443  33446788999999999999999999995     345678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||+++ +++.+.+.... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||++...
T Consensus        77 ~lv~e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A           77 TLVFEFCD-QDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             EEEEECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            99999995 57777665533 3477899999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCC-CccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ..        .........+|+.|+|||++.+.. ++.++||||||+++|+|++|..||.....................
T Consensus       152 ~~--------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~  223 (292)
T 3o0g_A          152 GI--------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT  223 (292)
T ss_dssp             CS--------CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             CC--------ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence            21        112223446789999999988766 799999999999999999988886433222222333322211110


Q ss_pred             hh------hhcCccccc--ccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VM------EIVDPSLLL--EVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~------~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..      ...+.....  ............+...+.+|+.+||+.||++|||+.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            00      000000000  0000111222345677889999999999999999999975


No 60 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=5.7e-46  Score=333.26  Aligned_cols=283  Identities=17%  Similarity=0.186  Sum_probs=212.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCC-----CceEEEEEeeccchhh-----------HHHHHHHHHHHHcCCCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDES-----RSIVAVKVVNLKQKEA-----------SRSFAAECNALRNIRHRNLIK   91 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~   91 (331)
                      ..++|.+.+.||+|+||+||+|.+..+     ++.||+|++.......           ......|+..++.++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            345899999999999999999998654     5789999986543211           122445666777889999999


Q ss_pred             eeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec
Q 046639           92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD  171 (331)
Q Consensus        92 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~  171 (331)
                      +++++... ..+....++|||++ +++|.+++... ...+++..++.++.|++.||.|||++   +|+||||||+||+++
T Consensus       113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred             EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence            99997653 23346689999999 99999999764 34578899999999999999999999   999999999999999


Q ss_pred             --CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCccc
Q 046639          172 --QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMF  249 (331)
Q Consensus       172 --~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  249 (331)
                        .++.+||+|||+++.+....... ...........||+.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHK-AYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCC-CSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cCCCCeEEEEECCcceecccCCccc-ccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence              88999999999998763221111 111112234559999999999999999999999999999999999999998643


Q ss_pred             CCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          250 NEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      .... ............+....++.+..          ..++..+.+++..||+.+|.+|||+.+|++.|+.+.+....
T Consensus       266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~  333 (364)
T 3op5_A          266 KDPK-YVRDSKIRYRENIASLMDKCFPA----------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS  333 (364)
T ss_dssp             TCHH-HHHHHHHHHHHCHHHHHHHHSCT----------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             cCHH-HHHHHHHHhhhhHHHHHHHhccc----------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            3322 22222221112222222211100          12367899999999999999999999999999999876643


No 61 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.5e-46  Score=321.72  Aligned_cols=258  Identities=22%  Similarity=0.369  Sum_probs=206.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+. ++..||+|++..... ..+.+.+|+.++++++||||+++++++     ......+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   81 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC   81 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence            357999999999999999999987 566799999974432 335688999999999999999999995     4456789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++....
T Consensus        82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             EEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             EEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccc
Confidence            9999999999999997643 3467888999999999999999999   99999999999999999999999999998652


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      .       ..........+++.|+|||++.+..++.++||||||+++|+|++ |..||......  ..........    
T Consensus       158 ~-------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~----  224 (269)
T 4hcu_A          158 D-------DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF----  224 (269)
T ss_dssp             C-------HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC----
T ss_pred             c-------cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCc----
Confidence            1       11112223446778999999998899999999999999999999 99999753211  1111111110    


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                          ..           .....++..+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus       225 ----~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          225 ----RL-----------YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             ----CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----cC-----------CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                00           00112356788999999999999999999999999998764


No 62 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=5.1e-46  Score=322.75  Aligned_cols=254  Identities=24%  Similarity=0.390  Sum_probs=203.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhh-------HHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA-------SRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.......       .+.+.+|+.+++.++||||+++++++..   
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---   94 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---   94 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence            358999999999999999999999999999999986432211       1678899999999999999999998632   


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEecCCCc----
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLDQDIV----  175 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~~~~~----  175 (331)
                        .  .++|||++++++|.+.+.... ..+++..++.++.|++.||.|||+.   +  ++|+||||+||+++.++.    
T Consensus        95 --~--~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~  166 (287)
T 4f0f_A           95 --P--PRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPV  166 (287)
T ss_dssp             --T--TEEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred             --C--CeEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCce
Confidence              2  269999999999999886543 3577889999999999999999999   8  999999999999988776    


Q ss_pred             -EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccC--CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          176 -AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM--GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       176 -~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                       +||+|||++...           ........+|+.|+|||++.  ...++.++||||||+++|+|++|..||.......
T Consensus       167 ~~kl~Dfg~~~~~-----------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  235 (287)
T 4f0f_A          167 CAKVADFGLSQQS-----------VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK  235 (287)
T ss_dssp             CEEECCCTTCBCC-----------SSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred             eEEeCCCCccccc-----------cccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence             999999998753           11233456899999999984  4567899999999999999999999997654333


Q ss_pred             chHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          253 LTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                      ............       .+           .....++..+.+++.+||+.||.+|||+.+|++.|+++
T Consensus       236 ~~~~~~~~~~~~-------~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          236 IKFINMIREEGL-------RP-----------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHHHSCC-------CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHHhccCC-------CC-----------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            222222211110       00           11224567899999999999999999999999999864


No 63 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.3e-46  Score=332.60  Aligned_cols=278  Identities=21%  Similarity=0.277  Sum_probs=212.7

Q ss_pred             hcCCCcCceeeccCeeEEEEee----ecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGI----LDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+.+.||+|+||+||+|+    +..+++.||+|++........+.+.+|+.+++.++||||+++++++..   ...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~   98 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGR   98 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCC
Confidence            3589999999999999999998    567889999999987777777789999999999999999999998642   345


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++|||++++++|.+++..... .+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  174 (327)
T 3lxl_A           99 QSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA  174 (327)
T ss_dssp             CEEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred             ceEEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence            678999999999999999976432 477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHH--hh
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK--MA  262 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~--~~  262 (331)
                      .......     ..........+|+.|+|||++.+..++.++||||||+++|+|++|..||......   ......  ..
T Consensus       175 ~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~~~~~~~~  246 (327)
T 3lxl_A          175 KLLPLDK-----DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE---FLRMMGCERD  246 (327)
T ss_dssp             EECCTTC-----SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHCC----
T ss_pred             eecccCC-----ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch---hhhhcccccc
Confidence            8752211     1111223345788899999999888999999999999999999999998643211   000000  00


Q ss_pred             Cc--chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          263 LP--DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       263 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      .+  ..+.........       ......++..+.+|+.+||+.||.+|||+.+|++.|+.+.....+
T Consensus       247 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  307 (327)
T 3lxl_A          247 VPALSRLLELLEEGQR-------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG  307 (327)
T ss_dssp             CCHHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred             cccHHHHHHHhhcccC-------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence            00  000000000000       011234567899999999999999999999999999998876554


No 64 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=6.6e-46  Score=334.45  Aligned_cols=254  Identities=17%  Similarity=0.216  Sum_probs=206.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++     ......
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~  123 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEM  123 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEE
Confidence            346899999999999999999999999999999999866655566789999999999999999999995     445778


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC--CCcEEEcccCccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ--DIVAHVGDLGLAK  185 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~--~~~~kl~Dfg~a~  185 (331)
                      ++|||++++++|.+++.... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.  ++.+||+|||++.
T Consensus       124 ~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~  199 (387)
T 1kob_A          124 VLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT  199 (387)
T ss_dssp             EEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence            99999999999999986533 3477899999999999999999999   9999999999999974  5789999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ...         .........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ............. 
T Consensus       200 ~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~-  268 (387)
T 1kob_A          200 KLN---------PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWE-  268 (387)
T ss_dssp             ECC---------TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHCCCC-
T ss_pred             ecC---------CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCC-
Confidence            752         11223345689999999999999999999999999999999999999975321 1111111111100 


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                           .++           .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       269 -----~~~-----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          269 -----FDE-----------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             -----CCS-----------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -----CCc-----------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                 000           111234567899999999999999999999986


No 65 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=5.3e-46  Score=332.86  Aligned_cols=254  Identities=19%  Similarity=0.253  Sum_probs=204.0

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++....  ....+.+.+|+.+++.++||||+++++++     ...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~  100 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE  100 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence            34567999999999999999999999999999999996542  34456788999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC---cEEEccc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI---VAHVGDL  181 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~---~~kl~Df  181 (331)
                      +..++|||++++++|.+.+...  ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++   .+||+||
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df  175 (362)
T 2bdw_A          101 SFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADF  175 (362)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             CEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeec
Confidence            6789999999999999999654  3477889999999999999999999   999999999999998654   5999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ..........
T Consensus       176 G~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~~~  245 (362)
T 2bdw_A          176 GLAIEVND---------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAG  245 (362)
T ss_dssp             TTCBCCTT---------CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHT
T ss_pred             CcceEecC---------CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhC
Confidence            99976521         1122345689999999999999999999999999999999999999975321 1111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....     ..            .....++..+.+|+.+||+.||++|||+.++++
T Consensus       246 ~~~~-----~~------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          246 AYDY-----PS------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             CCCC-----CT------------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCC-----Cc------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1100     00            111234567899999999999999999999875


No 66 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.8e-46  Score=323.98  Aligned_cols=272  Identities=13%  Similarity=0.136  Sum_probs=214.9

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++....  ....+.+|+.+++.+ .|++++++++++     .....
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~   80 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLH   80 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCce
Confidence            3568999999999999999999998899999999986432  234577899999999 799999999985     44567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc-----EEEccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV-----AHVGDL  181 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~-----~kl~Df  181 (331)
                      .++|||++ +++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.     ++|+||
T Consensus        81 ~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df  155 (298)
T 1csn_A           81 NVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDF  155 (298)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred             eEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence            89999999 999999998643 3477899999999999999999999   9999999999999987776     999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch--HHHHH
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT--LHEFV  259 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~  259 (331)
                      |++........... ..........||+.|+|||++.+..++.++||||||+++|+|++|..||.........  .....
T Consensus       156 g~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  234 (298)
T 1csn_A          156 GMVKFYRDPVTKQH-IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG  234 (298)
T ss_dssp             TTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred             cccccccccccccc-ccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH
Confidence            99987643222111 1112234566999999999999999999999999999999999999999865322211  11111


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      .........                .....++..+.+++.+||+.||++|||+.+|++.|+.+.+.+..
T Consensus       235 ~~~~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~  287 (298)
T 1csn_A          235 EKKQSTPLR----------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT  287 (298)
T ss_dssp             HHHHHSCHH----------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             hhccCccHH----------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence            111111000                11123567899999999999999999999999999999887654


No 67 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=5.1e-47  Score=336.73  Aligned_cols=253  Identities=21%  Similarity=0.295  Sum_probs=201.7

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcC-CCCCcceeeceeecc
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSI   99 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   99 (331)
                      ......++|.+.+.||+|+||+||+|++..+++.||+|+++...   ......+..|..++..+ +||||+++++++   
T Consensus        11 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~---   87 (345)
T 1xjd_A           11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF---   87 (345)
T ss_dssp             -----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE---
T ss_pred             cCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE---
Confidence            34456789999999999999999999999999999999997442   23345677899999876 899999999985   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                        ......++||||+++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+
T Consensus        88 --~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~  160 (345)
T 1xjd_A           88 --QTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIA  160 (345)
T ss_dssp             --ECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred             --EeCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEe
Confidence              44567999999999999999997643  377889999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      |||+++....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...+....
T Consensus       161 DFG~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~  231 (345)
T 1xjd_A          161 DFGMCKENML--------GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIR  231 (345)
T ss_dssp             CCTTCBCCCC--------TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred             EChhhhhccc--------CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHH
Confidence            9999975311        11223456799999999999999999999999999999999999999975321 11111111


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHH-HHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMR-DVV  316 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~-~i~  316 (331)
                      ...          +           .++..++..+.+|+.+||+.||.+||++. +|+
T Consensus       232 ~~~----------~-----------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          232 MDN----------P-----------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HCC----------C-----------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             hCC----------C-----------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            100          0           11122456788999999999999999997 554


No 68 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.7e-46  Score=330.12  Aligned_cols=268  Identities=17%  Similarity=0.201  Sum_probs=211.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||||++.....  ...+..|+.+++.+ .||||+++++++.     .....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~-----~~~~~   80 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGP-----CGKYN   80 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEE-----ETTEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEe-----cCCcc
Confidence            4689999999999999999999999999999999864432  23578999999999 8999999999853     35678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc-----EEEcccC
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV-----AHVGDLG  182 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~-----~kl~Dfg  182 (331)
                      ++|||++ +++|.+++... ...+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.     +||+|||
T Consensus        81 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg  155 (330)
T 2izr_A           81 AMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA  155 (330)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred             EEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence            9999999 99999999864 34578899999999999999999999   9999999999999998887     9999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch--HHHHHH
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT--LHEFVK  260 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~  260 (331)
                      ++..+........ ..........||+.|+|||++.+..++.++||||||+++|+|++|..||.........  +.....
T Consensus       156 ~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~  234 (330)
T 2izr_A          156 LAKEYIDPETKKH-IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD  234 (330)
T ss_dssp             TCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH
T ss_pred             cceeeecCCCCcc-ccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh
Confidence            9987633222111 1112234567999999999999999999999999999999999999999875332221  111111


Q ss_pred             hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          261 MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...+....                .....++ .+.+++..||+.||.+||++.+|.+.|+.+.+..
T Consensus       235 ~~~~~~~~----------------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          235 TKRATPIE----------------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHSCHH----------------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhccCCHH----------------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            11110000                0011234 8999999999999999999999999999887765


No 69 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.5e-46  Score=327.65  Aligned_cols=267  Identities=19%  Similarity=0.291  Sum_probs=213.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeee-----cCCCceEEEEEeeccch-hhHHHHHHHHHHHHcC-CCCCcceeeceeecc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQK-EASRSFAAECNALRNI-RHRNLIKIITICSSI   99 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   99 (331)
                      ...++|.+.+.||+|+||+||+|.+     ..+++.||+|++..... ...+.+.+|+.+++.+ +||||+++++++   
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~---   96 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC---   96 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE---
Confidence            3456899999999999999999985     45778999999975432 3457789999999999 899999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCC----------------ccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ----------------LRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDL  163 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----------------~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~di  163 (331)
                        ...+..++|||++++++|.+++......                .+++..++.++.|++.||.+||++   +++|+||
T Consensus        97 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  171 (313)
T 1t46_A           97 --TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDL  171 (313)
T ss_dssp             --CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             --ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence              4456789999999999999999875432                478889999999999999999999   9999999


Q ss_pred             CCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CC
Q 046639          164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RR  242 (331)
Q Consensus       164 k~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~  242 (331)
                      ||+||+++.++.+||+|||++.......      .........+|+.|+|||++.+..++.++||||||+++|+|++ |.
T Consensus       172 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  245 (313)
T 1t46_A          172 AARNILLTHGRITKICDFGLARDIKNDS------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (313)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCTTSCT------TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccceEEEcCCCCEEEccccccccccccc------cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999998652211      1111223446788999999988899999999999999999999 99


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                      .||........ ...........        .           ....++..+.+++.+||+.||.+|||+.+|++.|+++
T Consensus       246 ~p~~~~~~~~~-~~~~~~~~~~~--------~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          246 SPYPGMPVDSK-FYKMIKEGFRM--------L-----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             CSSTTCCSSHH-HHHHHHHTCCC--------C-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcccchhH-HHHHhccCCCC--------C-----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            99976543222 22222211110        0           0112456789999999999999999999999999998


Q ss_pred             hhhhh
Q 046639          323 RETFL  327 (331)
Q Consensus       323 ~~~~~  327 (331)
                      .....
T Consensus       306 ~~~~~  310 (313)
T 1t46_A          306 ISEST  310 (313)
T ss_dssp             HHHTC
T ss_pred             HHHhh
Confidence            87654


No 70 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=3.6e-46  Score=335.28  Aligned_cols=263  Identities=25%  Similarity=0.348  Sum_probs=198.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeec---CCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILD---ESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+.+.||+|+||+||+|++.   .++..||+|.++.. .....+.+.+|+.+++.++||||+++++++     ...
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~  118 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKS  118 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeC
Confidence            347999999999999999999886   56778999999754 334456799999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++||||+++++|.+++.... ..+++..++.++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||++
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  194 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLG  194 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             CceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccc
Confidence            67899999999999999997643 3477888999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.......     .........+++.|+|||++.+..++.++||||||+++|||++ |..||.....  ......+... 
T Consensus       195 ~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i~~~-  266 (373)
T 2qol_A          195 RVLEDDPE-----AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAVDEG-  266 (373)
T ss_dssp             ------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHHHTT-
T ss_pred             cccccCCc-----cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC-
Confidence            87522111     0111112235677999999998899999999999999999998 9999975421  1111111110 


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                                 ...       .....++..+.+++.+||+.||.+|||+.+|++.|+.+.+..
T Consensus       267 -----------~~~-------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          267 -----------YRL-------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             -----------EEC-------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             -----------CCC-------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence                       000       011235677999999999999999999999999999987653


No 71 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-46  Score=329.29  Aligned_cols=246  Identities=23%  Similarity=0.253  Sum_probs=202.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++....   ....+.+.+|..+++.++||||+++++++     .+..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence            357999999999999999999999999999999996442   22346678899999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||+++++|.+++....  .++...+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||++.
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~  154 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK  154 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcce
Confidence            7899999999999999997643  477888999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ...           .......||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...+........  
T Consensus       155 ~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~--  220 (318)
T 1fot_A          155 YVP-----------DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKILNAEL--  220 (318)
T ss_dssp             ECS-----------SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHCCC--
T ss_pred             ecC-----------CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC--
Confidence            641           112345689999999999999999999999999999999999999975321 111111111110  


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~  317 (331)
                                         .++......+.+++.+||+.||.+||     ++.+|++
T Consensus       221 -------------------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          221 -------------------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             -------------------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                               11122456788999999999999999     8888863


No 72 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2e-46  Score=333.61  Aligned_cols=267  Identities=19%  Similarity=0.268  Sum_probs=207.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeee-----cCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceeeceeeccc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKIITICSSID  100 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  100 (331)
                      ..++|.+.+.||+|+||+||+|.+     ..++..||+|++.... ......+.+|+.+++.+ .||||+++++++    
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~----  118 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC----  118 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence            356899999999999999999997     3466789999996442 33446789999999999 899999999995    


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccC---------------------CccchHHHHHHHHHHHHHHHHHhhcCCCCee
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNG---------------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIV  159 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~~~~~~~~~~~~i~~~l~~LH~~~~~~iv  159 (331)
                       ...+..++|||++++++|.+++.....                     ..+++..++.++.|++.||.|||+.   +|+
T Consensus       119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv  194 (344)
T 1rjb_A          119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV  194 (344)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence             445678999999999999999986442                     2367888999999999999999999   999


Q ss_pred             ecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHH
Q 046639          160 HGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF  239 (331)
Q Consensus       160 H~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~  239 (331)
                      |+||||+||+++.++.++|+|||++.......      .........+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus       195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~  268 (344)
T 1rjb_A          195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDS------NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF  268 (344)
T ss_dssp             ETTCSGGGEEEETTTEEEECCCGGGSCGGGCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             cCCCChhhEEEcCCCcEEeCCCccCcccccCc------cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence            99999999999999999999999998652211      111122345678899999998889999999999999999999


Q ss_pred             h-CCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHH
Q 046639          240 T-RRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAK  318 (331)
Q Consensus       240 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~  318 (331)
                      + |..||....... ...........        .           .....++..+.+|+.+||+.||.+|||+.+|++.
T Consensus       269 t~g~~p~~~~~~~~-~~~~~~~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          269 SLGVNPYPGIPVDA-NFYKLIQNGFK--------M-----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             TTSCCSSTTCCCSH-HHHHHHHTTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCcccCCcHH-HHHHHHhcCCC--------C-----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            8 999997653322 22222211110        0           0112245678999999999999999999999999


Q ss_pred             HHHhhhhhhc
Q 046639          319 LRHARETFLG  328 (331)
Q Consensus       319 L~~~~~~~~~  328 (331)
                      |+.+.+....
T Consensus       329 l~~~~~~~~~  338 (344)
T 1rjb_A          329 LGCQLADAEE  338 (344)
T ss_dssp             HHHHC-----
T ss_pred             HHHHHHHHHH
Confidence            9998876544


No 73 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.5e-46  Score=331.78  Aligned_cols=249  Identities=22%  Similarity=0.277  Sum_probs=199.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+++.||+|+||+||+|++..+++.||+|++...   .......+..|..+++.+ +||||+++++++     ...
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeC
Confidence            35799999999999999999999999999999999754   234456688999999988 899999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++|||++++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||++
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a  157 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC  157 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccc
Confidence            78899999999999999997643  477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc----hHHHHHH
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL----TLHEFVK  260 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~  260 (331)
                      +....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||........    .......
T Consensus       158 ~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  229 (345)
T 3a8x_A          158 KEGLR--------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ  229 (345)
T ss_dssp             BCSCC--------TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH
T ss_pred             ccccC--------CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH
Confidence            75311        11223345799999999999999999999999999999999999999965321110    0011110


Q ss_pred             hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH
Q 046639          261 MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM  312 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~  312 (331)
                      ....                 ....++..++..+.+|+.+||+.||.+||++
T Consensus       230 ~i~~-----------------~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          230 VILE-----------------KQIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHH-----------------CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHc-----------------CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            0000                 0001122345678899999999999999996


No 74 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4.1e-46  Score=328.80  Aligned_cols=270  Identities=19%  Similarity=0.317  Sum_probs=196.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCc---eEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRS---IVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      ...++|.+.+.||+|+||+||+|.+..++.   .||+|++...  .....+.+.+|+.+++.++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            445689999999999999999999876664   8999998644  34455778999999999999999999999754321


Q ss_pred             C-CcceeeEEEeecCCCCHHHHHHhcc----CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcE
Q 046639          102 E-GFDFKAIVFEYMQNRNLEQWLRQSN----GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA  176 (331)
Q Consensus       102 ~-~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~  176 (331)
                      . .....++|||++++++|.+++....    ...+++..++.++.|++.||.|||+.   +++|+||||+||+++.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence            1 1123489999999999999997632    12477889999999999999999999   99999999999999999999


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchH
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTL  255 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~  255 (331)
                      ||+|||++.......      .........+++.|+|||.+.+..++.++||||||+++|+|++ |..||......  ..
T Consensus       177 kl~Dfg~a~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~  248 (323)
T 3qup_A          177 CVADFGLSRKIYSGD------YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EI  248 (323)
T ss_dssp             EECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GH
T ss_pred             EEeeccccccccccc------cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HH
Confidence            999999998652211      1112223446778999999999999999999999999999999 99999764322  11


Q ss_pred             HHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          256 HEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      .........        .           .....++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus       249 ~~~~~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          249 YNYLIGGNR--------L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HHHHHTTCC--------C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHhcCCC--------C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            111111100        0           111234567899999999999999999999999999987654


No 75 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.4e-46  Score=349.90  Aligned_cols=260  Identities=24%  Similarity=0.370  Sum_probs=212.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      ..+|.+.+.||+|+||.||+|.+..++..||||++.... ...+.+.+|+.++++++||||++++++|     ......+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~~~~  292 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFY  292 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSCE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCCcEE
Confidence            457999999999999999999999889999999997443 3456789999999999999999999996     3446789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.......+++..++.++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++...
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  369 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT  369 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence            999999999999999876666688889999999999999999999   99999999999999999999999999998752


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ..       .........++..|+|||++.+..++.++||||||+++|||++ |..||......  .....+.....   
T Consensus       370 ~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~---  437 (495)
T 1opk_A          370 GD-------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR---  437 (495)
T ss_dssp             TC-------CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC---
T ss_pred             CC-------ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC---
Confidence            11       1111122345678999999998899999999999999999999 99999765322  22222211110   


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                               .       ..+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus       438 ---------~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          438 ---------M-------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             ---------C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             ---------C-------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence                     0       11124567899999999999999999999999999987543


No 76 
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=7e-46  Score=329.04  Aligned_cols=294  Identities=20%  Similarity=0.255  Sum_probs=206.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|++  +++.||+|++....... .....|+..+..++||||+++++.+...........
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            456899999999999999999987  58899999997443321 122334444555799999999987766556667778


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC------CCCeeecCCCCCCEEecCCCcEEEccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC------QPSIVHGDLKPSNILLDQDIVAHVGDL  181 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~------~~~ivH~dik~~nilv~~~~~~kl~Df  181 (331)
                      ++||||+++++|.+++....   .++..+..++.|++.||.|||+..      .++|+||||||+||+++.++.+||+||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            99999999999999997644   367888899999999999999762      228999999999999999999999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCC-------CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-------SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      |++..+...................||+.|+|||++.+       ..++.++||||||+++|+|++|..||.........
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            99987643222111122222334568999999999987       45678999999999999999997766432211110


Q ss_pred             ---HHHHHHhhCc-chhhhh-cCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          255 ---LHEFVKMALP-DKVMEI-VDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       255 ---~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                         .......... ...... ........+ +........++..+.+|+.+||+.||++|||+.++++.|+.+......
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~  322 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKF-PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER  322 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCCCCCC-CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred             HHhhhcccCCCchHHHHHhhhcccccCCCC-CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence               0000000000 000000 001111111 111112235778899999999999999999999999999999876543


No 77 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.4e-46  Score=328.19  Aligned_cols=275  Identities=19%  Similarity=0.294  Sum_probs=216.4

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeee-----cCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceee
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKII   93 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~   93 (331)
                      .........++|.+.+.||+|+||+||+|.+     ..+++.||+|++.... ......+.+|+.+++.+ .||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            4445555678999999999999999999985     4577899999997543 33446789999999999 699999999


Q ss_pred             ceeecccCCCcceeeEEEeecCCCCHHHHHHhccCC--------------ccchHHHHHHHHHHHHHHHHHhhcCCCCee
Q 046639           94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ--------------LRFLTQRVNIAIDVSFAIEYFHHHCQPSIV  159 (331)
Q Consensus        94 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~~~~iv  159 (331)
                      +++.    ......++|||++++++|.+++......              .+++..++.++.|++.||.+||+.   +++
T Consensus        98 ~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~  170 (316)
T 2xir_A           98 GACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI  170 (316)
T ss_dssp             EEEC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred             EEEe----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            9973    3345689999999999999999875432              277889999999999999999999   999


Q ss_pred             ecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHH
Q 046639          160 HGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF  239 (331)
Q Consensus       160 H~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~  239 (331)
                      |+||||+||+++.++.+||+|||++.......      .........+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus       171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  244 (316)
T 2xir_A          171 HRDLAARNILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF  244 (316)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccCccceEEECCCCCEEECCCccccccccCc------cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHH
Confidence            99999999999999999999999997652111      111222345788899999999889999999999999999999


Q ss_pred             h-CCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHH
Q 046639          240 T-RRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAK  318 (331)
Q Consensus       240 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~  318 (331)
                      + |..||............ .......                   .....++..+.+++.+||+.||.+|||+.+|++.
T Consensus       245 t~g~~p~~~~~~~~~~~~~-~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          245 SLGASPYPGVKIDEEFCRR-LKEGTRM-------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TTSCCSSTTCCCSHHHHHH-HHHTCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCCCCCCcccchhHHHHHH-hccCccC-------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8 99999764332222211 1111100                   0111245678899999999999999999999999


Q ss_pred             HHHhhhhhhc
Q 046639          319 LRHARETFLG  328 (331)
Q Consensus       319 L~~~~~~~~~  328 (331)
                      |+.+.+....
T Consensus       305 L~~~~~~~~~  314 (316)
T 2xir_A          305 LGNLLQANAQ  314 (316)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHhhhcc
Confidence            9999876543


No 78 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=6.4e-46  Score=332.45  Aligned_cols=281  Identities=23%  Similarity=0.236  Sum_probs=212.7

Q ss_pred             ccCCcccHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-----CCCc
Q 046639           15 QQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-----HRNL   89 (331)
Q Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i   89 (331)
                      .....+++.+.....++|.+.+.||+|+||+||+|++..+++.||+|++... .........|+.+++.+.     ||||
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            3444556677677788999999999999999999999999999999999633 344456778999999986     9999


Q ss_pred             ceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEE
Q 046639           90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNIL  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nil  169 (331)
                      +++++++.     ..+..++|||++ +++|.+++.......++...+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        99 v~~~~~~~-----~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl  169 (360)
T 3llt_A           99 VKYHGKFM-----YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENIL  169 (360)
T ss_dssp             CCEEEEEE-----ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             ecccceee-----ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEE
Confidence            99999854     346789999999 99999999887666688899999999999999999999   9999999999999


Q ss_pred             ecC-------------------------CCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCcc
Q 046639          170 LDQ-------------------------DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV  224 (331)
Q Consensus       170 v~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  224 (331)
                      ++.                         ++.+||+|||++....           .......||+.|+|||++.+..++.
T Consensus       170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~  238 (360)
T 3llt_A          170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS-----------DYHGSIINTRQYRAPEVILNLGWDV  238 (360)
T ss_dssp             ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT-----------SCCCSCCSCGGGCCHHHHTTCCCCT
T ss_pred             EccccccccccchhcccccccccccccCCCCEEEEeccCceecC-----------CCCcCccCcccccCcHHHcCCCCCC
Confidence            975                         7899999999997641           1122456899999999999999999


Q ss_pred             chhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC--cchhh---------hhcCcccccccccCCcc--------
Q 046639          225 SGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL--PDKVM---------EIVDPSLLLEVTANNYS--------  285 (331)
Q Consensus       225 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~--------  285 (331)
                      ++||||||+++|+|++|..||...... ...........  +....         ...+........+....        
T Consensus       239 ~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  317 (360)
T 3llt_A          239 SSDMWSFGCVLAELYTGSLLFRTHEHM-EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV  317 (360)
T ss_dssp             THHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHCCCCCCCCcHH-HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhh
Confidence            999999999999999999999753211 11111111111  10000         00000000000000000        


Q ss_pred             ------hHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          286 ------WIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       286 ------~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            +.......+.+|+.+||+.||.+|||+.++++
T Consensus       318 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          318 KKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                  01111267889999999999999999999974


No 79 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=3.8e-46  Score=332.31  Aligned_cols=253  Identities=21%  Similarity=0.298  Sum_probs=190.6

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|++....  ..+.+.+|+.+++.++||||+++++++     .....
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~  122 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTE  122 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCe
Confidence            34567999999999999999999999999999999997442  335678899999999999999999995     44567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CCcEEEcccCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DIVAHVGDLGL  183 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~~~kl~Dfg~  183 (331)
                      .++|||++++++|.+++...  ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.   ++.+||+|||+
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~  197 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGL  197 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred             EEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence            89999999999999999654  3477889999999999999999999   9999999999999975   88999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||.........+........
T Consensus       198 a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~  268 (349)
T 2w4o_A          198 SKIVEH---------QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY  268 (349)
T ss_dssp             ------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC
T ss_pred             ccccCc---------ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC
Confidence            976521         11223456899999999999999999999999999999999999999754322212222211110


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..     .            ..+...++..+.+|+.+||+.||++|||+.++++
T Consensus       269 ~~-----~------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          269 YF-----I------------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CC-----C------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cc-----C------------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00     0            0111234567899999999999999999999985


No 80 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.8e-46  Score=332.90  Aligned_cols=246  Identities=20%  Similarity=0.213  Sum_probs=202.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+++.||+|+||.||+|++..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ....
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCC
Confidence            358999999999999999999999999999999996442   23346788999999999999999999985     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||+++++|.+++....  .++...+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||+++
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~  189 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK  189 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccce
Confidence            8899999999999999997654  377889999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....           ......||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...+..+.....  
T Consensus       190 ~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~--  255 (350)
T 1rdq_E          190 RVKG-----------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-IQIYEKIVSGKV--  255 (350)
T ss_dssp             ECSS-----------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC--
T ss_pred             eccC-----------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-HHHHHHHHcCCC--
Confidence            6521           12345689999999999999999999999999999999999999975321 111111111110  


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCc-----HHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERME-----MRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-----~~~i~~  317 (331)
                                         .++..++..+.+|+.+||+.||.+||+     +.+|++
T Consensus       256 -------------------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          256 -------------------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -------------------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                               111234567899999999999999998     777763


No 81 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=4.6e-46  Score=319.84  Aligned_cols=259  Identities=24%  Similarity=0.346  Sum_probs=205.9

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++     ......
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   78 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPI   78 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCce
Confidence            3468999999999999999999886 566799999964432 345688999999999999999999995     455678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++.... ..+++..++.++.|++.||++||+.   +++|+||||+||+++.++.++|+|||++...
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             EEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceec
Confidence            99999999999999997643 3477889999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ....       ........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  ...........  
T Consensus       155 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--  223 (268)
T 3sxs_A          155 LDDQ-------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGHR--  223 (268)
T ss_dssp             CTTC-------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCC--
T ss_pred             chhh-------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcCCC--
Confidence            2111       111223345677999999998889999999999999999999 99999754221  11111110000  


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                         ..              .+..++..+.+++.+||+.||.+|||+.++++.|+.+.+.
T Consensus       224 ---~~--------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          224 ---LY--------------RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             ---CC--------------CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ---CC--------------CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence               00              0112345788999999999999999999999999988754


No 82 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3.3e-46  Score=330.98  Aligned_cols=268  Identities=20%  Similarity=0.314  Sum_probs=210.4

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeec-------CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceeecee
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILD-------ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKIITIC   96 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   96 (331)
                      ....++|.+.+.||+|+||+||+|.+.       .++..||+|++.... ......+.+|+.+++.+ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            344578999999999999999999975       356789999997543 34456789999999999 899999999995


Q ss_pred             ecccCCCcceeeEEEeecCCCCHHHHHHhccC--------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 046639           97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG--------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD  162 (331)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~d  162 (331)
                           ...+..++|||++++++|.+++.....              ..+++..++.++.|++.||.+||+.   +++|+|
T Consensus       111 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D  182 (334)
T 2pvf_A          111 -----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD  182 (334)
T ss_dssp             -----CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             -----ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence                 445678999999999999999986432              2367888999999999999999999   999999


Q ss_pred             CCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-C
Q 046639          163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-R  241 (331)
Q Consensus       163 ik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g  241 (331)
                      |||+||+++.++.+||+|||++.......      .........+++.|+|||++.+..++.++||||||+++|+|++ |
T Consensus       183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  256 (334)
T 2pvf_A          183 LAARNVLVTENNVMKIADFGLARDINNID------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG  256 (334)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEECTTTS------SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             CccceEEEcCCCCEEEccccccccccccc------cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999998652211      1111223346788999999988889999999999999999999 9


Q ss_pred             CCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHH
Q 046639          242 RRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRH  321 (331)
Q Consensus       242 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~  321 (331)
                      ..||.....  ......+.....        .           .....++..+.+++.+||+.||.+|||+.+|++.|+.
T Consensus       257 ~~p~~~~~~--~~~~~~~~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          257 GSPYPGIPV--EELFKLLKEGHR--------M-----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             CCSSTTCCH--HHHHHHHHHTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcCcCCH--HHHHHHHhcCCC--------C-----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            999975421  111111111100        0           1112345678999999999999999999999999999


Q ss_pred             hhhhhhc
Q 046639          322 ARETFLG  328 (331)
Q Consensus       322 ~~~~~~~  328 (331)
                      +.....+
T Consensus       316 l~~~~~~  322 (334)
T 2pvf_A          316 ILTLTTN  322 (334)
T ss_dssp             HHHHHC-
T ss_pred             HHhcccc
Confidence            9876544


No 83 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.3e-45  Score=323.94  Aligned_cols=275  Identities=21%  Similarity=0.279  Sum_probs=203.5

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeeccc
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSID  100 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  100 (331)
                      ...+...++|.+++.||+|+||+||+|.+. +++.||+|++....  ......+.+|+.+++.++||||+++++++    
T Consensus        14 ~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----   88 (311)
T 3niz_A           14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI----   88 (311)
T ss_dssp             -CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             eeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE----
Confidence            334455679999999999999999999985 58899999986442  22346688999999999999999999994    


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcc
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~D  180 (331)
                       ......++|||+++ ++|.+++.... ..++...+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|
T Consensus        89 -~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D  162 (311)
T 3niz_A           89 -HSERCLTLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLAD  162 (311)
T ss_dssp             -CCSSCEEEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred             -ccCCEEEEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEcc
Confidence             45677899999995 58888887643 3477888999999999999999999   999999999999999999999999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      ||++......        ........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||....... ......
T Consensus       163 fg~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~  233 (311)
T 3niz_A          163 FGLARAFGIP--------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIF  233 (311)
T ss_dssp             CTTCEETTSC--------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHH
T ss_pred             CcCceecCCC--------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            9999865211        122233457899999999876 568999999999999999999999998754333 222222


Q ss_pred             HhhCcc---hhhhhcCcc-----ccccccc-CCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPD---KVMEIVDPS-----LLLEVTA-NNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~---~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......   .........     ....+.. ........+...+.+|+.+||+.||.+|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            211111   000000000     0000000 000112234567889999999999999999999985


No 84 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4.4e-46  Score=325.45  Aligned_cols=270  Identities=22%  Similarity=0.344  Sum_probs=206.0

Q ss_pred             hcCCCcCceeeccCeeEEEEee----ecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGI----LDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      .++|.+.+.||+|+||.||+|+    +..+++.||+|++.... ......+.+|+.+++.++||||+++++++..   ..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~   96 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DG   96 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CC
Confidence            4569999999999999999998    56789999999986443 2334678899999999999999999999753   22


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||+
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             CceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence            356799999999999999996543 3477889999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.......     ..........+|..|+|||++.+..++.++||||||+++|+|++|..|+....      ........
T Consensus       173 ~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~  241 (302)
T 4e5w_A          173 TKAIETDK-----EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIG  241 (302)
T ss_dssp             CEECCTTC-----CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHC
T ss_pred             cccccCCC-----cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccC
Confidence            98762211     11122233457788999999999899999999999999999999999875321      00100000


Q ss_pred             cc-------hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhh
Q 046639          264 PD-------KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHAR  323 (331)
Q Consensus       264 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~  323 (331)
                      +.       ..........       .......++..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          242 PTHGQMTVTRLVNTLKEGK-------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             SCCGGGHHHHHHHHHHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccccCHHHHHHHHhccC-------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            00       0000000000       00112245678999999999999999999999999999875


No 85 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.4e-46  Score=330.14  Aligned_cols=266  Identities=19%  Similarity=0.281  Sum_probs=199.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++...   .......+.+|+.+++.++||||+++++++.... ...
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   88 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAG   88 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCC
Confidence            356899999999999999999999999999999999654   3344567889999999999999999999875432 223


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++||||+++++|.+++....  .+++..++.++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             cccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence            34599999999999999997644  477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      .......     ..........||+.|+|||++.+..++.++||||||+++|+|++|..||........ ..........
T Consensus       164 ~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~  237 (311)
T 3ork_A          164 RAIADSG-----NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPI  237 (311)
T ss_dssp             -----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCC
T ss_pred             ccccccc-----cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCC
Confidence            8652211     111222345689999999999999999999999999999999999999975422111 1111111100


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH-HHHHHh
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV-AKLRHA  322 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~-~~L~~~  322 (331)
                      ..                 ......++..+.+++.+||+.||.+||++.+++ ..+...
T Consensus       238 ~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          238 PP-----------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CH-----------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             Cc-----------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            00                 001123456789999999999999999666554 444433


No 86 
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.6e-46  Score=336.87  Aligned_cols=283  Identities=16%  Similarity=0.190  Sum_probs=216.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++..   .....
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~   83 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRH   83 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCe
Confidence            3568999999999999999999999999999999996433 2334667899999999999999999998653   22346


Q ss_pred             eeEEEeecCCCCHHHHHHhcc-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe----cCCCcEEEccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSN-GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL----DQDIVAHVGDL  181 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv----~~~~~~kl~Df  181 (331)
                      .++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.   +|+|+||||+||++    +.++.+||+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF  160 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence            799999999999999997643 23378899999999999999999999   99999999999999    78888999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCC--------CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG--------SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL  253 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  253 (331)
                      |+++....         ........||+.|+|||++.+        ..++.++||||||+++|+|++|..||........
T Consensus       161 G~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~  231 (396)
T 4eut_A          161 GAARELED---------DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR  231 (396)
T ss_dssp             GGCEECCC---------GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT
T ss_pred             CCceEccC---------CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc
Confidence            99987521         112223568999999998764        4678899999999999999999999976543322


Q ss_pred             hHH---HHHHhhCcchhhhhcC---cc-cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          254 TLH---EFVKMALPDKVMEIVD---PS-LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       254 ~~~---~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ...   .......+..+.....   .. ......+....+...+...+.+++.+||+.||++|||+.++++.++.+.+.
T Consensus       232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          232 NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            222   2222211111110000   00 000011112234467888999999999999999999999999999887653


No 87 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.4e-45  Score=324.00  Aligned_cols=275  Identities=21%  Similarity=0.364  Sum_probs=205.3

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEeeecC---CCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeec
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGILDE---SRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSS   98 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   98 (331)
                      ++....++|.+.+.||+|+||+||+|.+..   ++..||+|++...  .......+.+|+.+++.++||||+++++++..
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            344456789999999999999999998754   5668999998644  33445678999999999999999999999865


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHh----ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI  174 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~  174 (331)
                      .........++|||++++++|.+++..    .....+++..++.++.|++.||.|||++   +++|+||||+||+++.++
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence            433333456999999999999999854    2334578899999999999999999999   999999999999999999


Q ss_pred             cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcc
Q 046639          175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGL  253 (331)
Q Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~  253 (331)
                      .+||+|||++.......      .........+++.|+|||.+.+..++.++||||||+++|+|++ |..||......  
T Consensus       185 ~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--  256 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGD------YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--  256 (313)
T ss_dssp             CEEECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred             cEEEeecCcceeccccc------ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--
Confidence            99999999997652211      1112223446778999999999999999999999999999999 89999764322  


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      ..........        .+           .....++..+.+++.+||+.||.+|||+.+|++.|+.+.+.+.+
T Consensus       257 ~~~~~~~~~~--------~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~  312 (313)
T 3brb_A          257 EMYDYLLHGH--------RL-----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD  312 (313)
T ss_dssp             GHHHHHHTTC--------CC-----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHcCC--------CC-----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence            1111111110        00           11123456799999999999999999999999999999887653


No 88 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1e-45  Score=325.47  Aligned_cols=271  Identities=21%  Similarity=0.285  Sum_probs=189.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+++.||+|+||+||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++     ...+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence            4689999999999999999999999999999999975432 2336688999999999999999999994     456788


Q ss_pred             eEEEeecCCCCHHHHHHhcc----CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          108 AIVFEYMQNRNLEQWLRQSN----GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ++|||+++ ++|.+++....    ...+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||+
T Consensus        79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  154 (317)
T 2pmi_A           79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL  154 (317)
T ss_dssp             EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred             EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence            99999995 69999987632    23477888899999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +......        ........+|+.|+|||++.+. .++.++||||||+++|+|++|..||...... ..........
T Consensus       155 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~  225 (317)
T 2pmi_A          155 ARAFGIP--------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIM  225 (317)
T ss_dssp             CEETTSC--------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH
T ss_pred             ceecCCC--------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence            9865211        1122334689999999998764 6899999999999999999999999764221 1222222211


Q ss_pred             Cc--chhhhhc--CcccccccccCCc---------chHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LP--DKVMEIV--DPSLLLEVTANNY---------SWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~--~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..  .......  .+.....+.....         .....+...+.+|+.+||+.||++|||+.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            10  0000000  0000000000000         001124567899999999999999999999974


No 89 
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.8e-45  Score=320.56  Aligned_cols=272  Identities=18%  Similarity=0.208  Sum_probs=211.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++.....  ...+..|+.+++.++|++++..+..+.    ......
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~   80 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN   80 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeec----CCCCce
Confidence            45689999999999999999999999999999998754322  235778999999999998888887763    345678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccCcc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLA  184 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg~a  184 (331)
                      ++|||++ +++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||++   +.++.+||+|||++
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           81 VMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            9999999 999999997543 3477899999999999999999999   99999999999999   78899999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc--hHHHHHHhh
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL--TLHEFVKMA  262 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~  262 (331)
                      ........... ..........+|+.|+|||++.+..++.++||||||+++|+|++|..||........  .........
T Consensus       156 ~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (296)
T 4hgt_A          156 KKYRDARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  234 (296)
T ss_dssp             EECBCTTTCCB-CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred             eeccCcccCcc-CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence            87643222111 111233456789999999999999999999999999999999999999986533221  122221111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      ......                .....++..+.+|+.+||+.||++|||+.+|++.|+.+.+...
T Consensus       235 ~~~~~~----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          235 MSTPIE----------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHSCHH----------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ccchhh----------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            111100                0112245679999999999999999999999999999988754


No 90 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=6.3e-46  Score=322.60  Aligned_cols=261  Identities=25%  Similarity=0.388  Sum_probs=197.1

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|++.+.||+|+||+||+|.+..   .+|+|++...  .....+.+.+|+.+++.++||||+++++++.      ...
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~   93 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQ   93 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CCc
Confidence            5689999999999999999998753   4999998644  3444577899999999999999999998742      345


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++..
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  169 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE  169 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             cEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence            789999999999999996543 3477888999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccC---CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGM---GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      .....      .........||+.|+|||++.   +..++.++||||||+++|+|++|..||..................
T Consensus       170 ~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  243 (289)
T 3og7_A          170 KSRWS------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL  243 (289)
T ss_dssp             --------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC
T ss_pred             ccccc------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc
Confidence            52111      112223456899999999986   567889999999999999999999999764332221111111111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      ....                ......++..+.+|+.+||+.||.+|||+.+|++.|+.+.+
T Consensus       244 ~~~~----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          244 SPDL----------------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             CCCT----------------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             Ccch----------------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            1110                01122456789999999999999999999999999998764


No 91 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=3.4e-46  Score=332.49  Aligned_cols=250  Identities=18%  Similarity=0.239  Sum_probs=201.7

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFE  102 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  102 (331)
                      ...++|.+++.||+|+||+||+|++..+++.||+|++....   ......+..|..++..+ .||+|+++++++     .
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~   91 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----Q   91 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----E
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----E
Confidence            34568999999999999999999999999999999997442   23346678899999988 799999999984     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      ..+..++||||+++++|.+++....  .+++..++.++.|++.||.|||++   ||+||||||+||+++.+|.+||+|||
T Consensus        92 ~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG  166 (353)
T 2i0e_A           92 TMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG  166 (353)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCC
Confidence            5578999999999999999997644  377889999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++.....        .........||+.|+|||++.+..++.++||||||+++|||++|..||..... ...+..+....
T Consensus       167 ~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~  237 (353)
T 2i0e_A          167 MCKENIW--------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEHN  237 (353)
T ss_dssp             TCBCCCC--------TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC
T ss_pred             ccccccc--------CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCC
Confidence            9975311        11223345799999999999999999999999999999999999999975321 11111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCc-----HHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERME-----MRDVV  316 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-----~~~i~  316 (331)
                      .                     .++..++..+.+|+.+||+.||.+||+     +.+|+
T Consensus       238 ~---------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~  275 (353)
T 2i0e_A          238 V---------------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  275 (353)
T ss_dssp             C---------------------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred             C---------------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            0                     111234567899999999999999995     46654


No 92 
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.7e-46  Score=329.03  Aligned_cols=277  Identities=19%  Similarity=0.206  Sum_probs=213.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++... .......
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~  105 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEA  105 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCcee
Confidence            346899999999999999999999989999999999776666778899999999999999999999997532 1234578


Q ss_pred             eEEEeecCCCCHHHHHHhc--cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          108 AIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ++|||++++++|.+++...  .+..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++.
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~  182 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN  182 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence            9999999999999999763  345578899999999999999999999   99999999999999999999999999887


Q ss_pred             ccccCCCCCc-ccccCCceeecccccccCCcccCCCC---CccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          186 FLFGYEPGTA-AETASNSIEIKGIVGYVAPEYGMGSK---ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       186 ~~~~~~~~~~-~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      .......... ...........||+.|+|||++.+..   ++.++||||||+++|+|++|..||................
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~  262 (317)
T 2buj_A          183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN  262 (317)
T ss_dssp             ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred             hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence            5411000000 00000112334688999999987654   6889999999999999999999996532222222221111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      ....                   .....++..+.+++.+||+.||.+|||+.+|++.|+.+....-
T Consensus       263 ~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  309 (317)
T 2buj_A          263 QLSI-------------------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP  309 (317)
T ss_dssp             C--C-------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred             cCCC-------------------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence            0000                   0011245678999999999999999999999999998865543


No 93 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=3.3e-46  Score=320.97  Aligned_cols=255  Identities=21%  Similarity=0.310  Sum_probs=205.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|++.  +..||+|++....  ....+.+.+|+.+++.++||||+++++++...   ....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~   83 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH   83 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence            347999999999999999999985  7889999997543  34456789999999999999999999996432   2367


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      .++|||++++++|.+++.......+++..++.++.|++.||.|||+.   +  ++|+||||+||+++.++.++|+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~  160 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVK  160 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccce
Confidence            89999999999999999876665688899999999999999999998   8  999999999999999999999988876


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCcc---chhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV---SGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      ...             ......+|+.|+|||++.+..++.   ++||||||+++|+|++|..||........ .......
T Consensus       161 ~~~-------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~  226 (271)
T 3kmu_A          161 FSF-------------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALE  226 (271)
T ss_dssp             CTT-------------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHS
T ss_pred             eee-------------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhc
Confidence            532             111235788999999998765544   79999999999999999999975422111 1111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .        ..+           .....++..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       227 ~--------~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          227 G--------LRP-----------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             C--------CCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             C--------CCC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            0        011           1112345678999999999999999999999999998864


No 94 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=322.50  Aligned_cols=258  Identities=24%  Similarity=0.389  Sum_probs=200.3

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeE
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAI  109 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~l  109 (331)
                      ++|.+.+.||+|+||+||+|.+.  ++.||+|.+...  ...+.+.+|+.++++++||||+++++++.       +..++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l   76 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL   76 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence            47999999999999999999985  678999998533  34567889999999999999999999853       23689


Q ss_pred             EEeecCCCCHHHHHHhccC-CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc-EEEcccCccccc
Q 046639          110 VFEYMQNRNLEQWLRQSNG-QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV-AHVGDLGLAKFL  187 (331)
Q Consensus       110 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~-~kl~Dfg~a~~~  187 (331)
                      ||||+++++|.+++..... ..++...++.++.|++.||.|||+....+++|+||||+||+++.++. +||+|||++...
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence            9999999999999976432 23566788899999999999999931129999999999999998886 799999999754


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ..           ......||+.|+|||++.+..++.++||||||+++|+|++|..||.................     
T Consensus       157 ~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----  220 (307)
T 2eva_A          157 QT-----------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG-----  220 (307)
T ss_dssp             -------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT-----
T ss_pred             cc-----------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC-----
Confidence            11           11234589999999999999999999999999999999999999975433221111111110     


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                         ..+           .....++..+.+++.+||+.||.+|||+.++++.|+.+.+.+.+
T Consensus       221 ---~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  267 (307)
T 2eva_A          221 ---TRP-----------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG  267 (307)
T ss_dssp             ---CCC-----------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred             ---CCC-----------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence               001           11123456788999999999999999999999999999877654


No 95 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=2.2e-45  Score=322.23  Aligned_cols=267  Identities=22%  Similarity=0.280  Sum_probs=202.5

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++...   .......+.+|+.+++.++||||+++++++.     ..
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~  104 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----ED  104 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ET
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cC
Confidence            345799999999999999999999889999999998642   3445577899999999999999999999964     34


Q ss_pred             ceeeEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      +..++|||++++++|.+++..  .....++...++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg  181 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG  181 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence            678999999999999999975  2344577889999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++......        ........+++.|+|||++.+..++.++||||||+++|+|++|..||.................
T Consensus       182 ~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  253 (310)
T 2wqm_A          182 LGRFFSSK--------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC  253 (310)
T ss_dssp             -------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT
T ss_pred             ceeeecCC--------CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc
Confidence            98765211        1122334688899999999999999999999999999999999999975322211111111110


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                              ..+...          ...++..+.+|+.+||+.||.+|||+.+|++.|+++......
T Consensus       254 --------~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          254 --------DYPPLP----------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             --------CSCCCC----------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             --------cCCCCc----------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence                    000000          013456789999999999999999999999999999876543


No 96 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=3.5e-45  Score=317.97  Aligned_cols=254  Identities=25%  Similarity=0.356  Sum_probs=203.4

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..+.|.+.+.||+|+||+||+|.+..++..||+|.+...  .......+.+|+.+++.++||||+++++++... .....
T Consensus        24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~  102 (290)
T 1t4h_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKK  102 (290)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCE
T ss_pred             CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCc
Confidence            345689999999999999999999999999999998644  344557789999999999999999999987543 34456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEec-CCCcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLD-QDIVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~-~~~~~kl~Dfg  182 (331)
                      ..++|||++++++|.+++....  .+++..++.++.|++.||.|||+.   +  ++|+||||+||+++ .++.++|+|||
T Consensus       103 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          103 CIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             eEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence            7899999999999999997643  367788999999999999999999   8  99999999999997 78999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++...          .........+|+.|+|||++.+ .++.++||||||+++|+|++|..||.................
T Consensus       178 ~~~~~----------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  246 (290)
T 1t4h_A          178 LATLK----------RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV  246 (290)
T ss_dssp             GGGGC----------CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC
T ss_pred             Ccccc----------cccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC
Confidence            99754          1122334568999999998875 589999999999999999999999975432211111111100


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                               .+.          .+...+++.+.+++.+||+.||.+|||+.++++
T Consensus       247 ---------~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          247 ---------KPA----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---------CCG----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---------Ccc----------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                     000          111223457899999999999999999999975


No 97 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=8.3e-46  Score=327.43  Aligned_cols=260  Identities=19%  Similarity=0.303  Sum_probs=200.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCce----EEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSI----VAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      .++|.+.+.||+|+||+||+|++..+++.    ||+|.+... .......+.+|+.+++.++||||++++++|..     
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence            35799999999999999999998777665    477776433 23345678999999999999999999999753     


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                       ...++|+|++.+++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        89 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~  163 (327)
T 3poz_A           89 -STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             -SSEEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred             -CCeEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence             23679999999999999997644 3467888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++......      .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  .........
T Consensus       164 a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~  235 (327)
T 3poz_A          164 AKLLGAEE------KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG  235 (327)
T ss_dssp             HHHHTTTC------C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTT
T ss_pred             eeEccCCc------ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcC
Confidence            98763211      1112223446778999999999999999999999999999999 99999764322  222222211


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ...                   .....+...+.+++.+||+.||.+|||+.+|++.|+.+...
T Consensus       236 ~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          236 ERL-------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCC-------------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCC-------------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            100                   01123456788999999999999999999999999988654


No 98 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=9.4e-46  Score=331.19  Aligned_cols=254  Identities=19%  Similarity=0.211  Sum_probs=193.5

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+.+++.++||||+++++++     ......
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~   91 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHL   91 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEE
Confidence            4568999999999999999999999999999999996432 2335678999999999999999999995     445678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc--EEEcccCccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV--AHVGDLGLAK  185 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~--~kl~Dfg~a~  185 (331)
                      ++||||+++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.++.  +||+|||+++
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence            99999999999999997644  377899999999999999999999   9999999999999987765  9999999987


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccc-hhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVS-GDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ...         .........||+.|+|||++.+..++.+ +||||||+++|+|++|..||........ +.........
T Consensus       167 ~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~  236 (361)
T 3uc3_A          167 SSV---------LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILS  236 (361)
T ss_dssp             -----------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHT
T ss_pred             ccc---------ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhc
Confidence            431         1122334569999999999988877555 8999999999999999999986533222 2222221111


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...      ...         ....++..+.+|+.+||+.||.+|||+.++++
T Consensus       237 ~~~------~~~---------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          237 VKY------SIP---------DDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             TCC------CCC---------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCC------CCC---------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            000      000         00123467889999999999999999999985


No 99 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.9e-45  Score=331.41  Aligned_cols=254  Identities=17%  Similarity=0.197  Sum_probs=194.3

Q ss_pred             hcCCCcC-ceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHc-CCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPA-NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN-IRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+. +.||+|+||+||+|.+..+++.||||++...     ..+.+|+.++.+ .+||||+++++++... +.+...
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~  133 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC  133 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence            3456666 6899999999999999999999999998632     245678887744 5899999999987542 234567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CCcEEEcccCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DIVAHVGDLGL  183 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~~~kl~Dfg~  183 (331)
                      +++||||+++++|.+++.......+++..+..++.|++.||.|||+.   +|+||||||+||+++.   ++.+||+|||+
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence            89999999999999999876656688999999999999999999999   9999999999999997   78999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc---hHHHHHH
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL---TLHEFVK  260 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~  260 (331)
                      ++....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||........   .......
T Consensus       211 a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~  281 (400)
T 1nxk_A          211 AKETTS---------HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  281 (400)
T ss_dssp             CEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred             ccccCC---------CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence            986521         1122345689999999999999999999999999999999999999976433221   1111111


Q ss_pred             hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          261 MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .....     ..            .....++..+.+|+.+||+.||++|||+.++++
T Consensus       282 ~~~~~-----~~------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          282 GQYEF-----PN------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             TCCCC-----CT------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccC-----CC------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11000     00            001234567899999999999999999999986


No 100
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.9e-46  Score=327.13  Aligned_cols=279  Identities=22%  Similarity=0.331  Sum_probs=214.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEee----ecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGI----LDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+.+.||+|+||.||+|.    +..+++.||+|++........+.+.+|+.+++.++||||+++++++..   ..
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~  115 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AG  115 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-----
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cC
Confidence            34579999999999999999998    456889999999987666677889999999999999999999998642   22


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||+
T Consensus       116 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          116 RRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             --CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             CCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence            346799999999999999998653 3467888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +........     .........++..|+|||++.+..++.++||||||+++|+|++|..||.....   .+........
T Consensus       192 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~  263 (326)
T 2w1i_A          192 TKVLPQDKE-----YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDK  263 (326)
T ss_dssp             CEECCSSCS-----EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTC
T ss_pred             hhhcccccc-----ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhcccc
Confidence            987522111     11112233467779999999988899999999999999999999999864211   0111000000


Q ss_pred             c-----chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          264 P-----DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      .     ..+...+.....       ......++..+.+|+.+||+.||.+|||+.+|++.|+.+.+.+.|
T Consensus       264 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~g  326 (326)
T 2w1i_A          264 QGQMIVFHLIELLKNNGR-------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG  326 (326)
T ss_dssp             CTHHHHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             chhhhHHHHHHHhhcCCC-------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcC
Confidence            0     000000000000       011234567899999999999999999999999999999988764


No 101
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.5e-45  Score=320.16  Aligned_cols=268  Identities=20%  Similarity=0.273  Sum_probs=198.5

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ++|.+.+.||+|+||+||+|.+ .+++.||+|.+.....  .....+.+|+.+++.++||||+++++++     ...+..
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence            5799999999999999999998 5788999999865432  2336688999999999999999999995     445678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||+++ ++|.+++.... ..++...+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++...
T Consensus        76 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (288)
T 1ob3_A           76 VLVFEHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF  150 (288)
T ss_dssp             EEEEECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred             EEEEEecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence            99999995 59999987643 3467788999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...        ........+|+.|+|||++.+. .++.++||||||+++|+|++|..||...... ..............
T Consensus       151 ~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~  221 (288)
T 1ob3_A          151 GIP--------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPN  221 (288)
T ss_dssp             CC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred             Ccc--------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCC
Confidence            211        1122334578999999998764 5899999999999999999999999764221 12222222111100


Q ss_pred             h------hh--hcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 V------ME--IVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .      ..  ..++............+...+...+.+|+.+||+.||++|||+.++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0      00  000000000000011222345677899999999999999999999974


No 102
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=5.9e-45  Score=317.34  Aligned_cols=271  Identities=18%  Similarity=0.210  Sum_probs=213.6

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++.....  ...+.+|+.+++.+.|++++..+..+.    ......+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~   81 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV   81 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCcccccc----CCCCceE
Confidence            5689999999999999999999999999999999864432  245789999999999988887777663    3356789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccCccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAK  185 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg~a~  185 (331)
                      +|||++ +++|.+++.... ..+++..++.++.|++.||.|||++   +++|+||||+||++   +.++.+||+|||++.
T Consensus        82 lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           82 MVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             EEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             EEEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            999999 999999997533 3477899999999999999999999   99999999999999   488899999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCc--chHHHHHHhhC
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG--LTLHEFVKMAL  263 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~  263 (331)
                      .......... ..........||+.|+|||++.+..++.++||||||+++|+|++|..||.......  ..+........
T Consensus       157 ~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 3uzp_A          157 KYRDARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             ECBCTTTCCB-CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             cccccccccc-cccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence            7643222111 11122345668999999999999999999999999999999999999998643221  12222222111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      .....                .....++..+.+++.+||+.||++|||+.+|++.|+.+.+...
T Consensus       236 ~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          236 STPIE----------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HSCHH----------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             CCchH----------------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence            11100                0112345679999999999999999999999999999987654


No 103
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.1e-46  Score=343.46  Aligned_cols=261  Identities=22%  Similarity=0.361  Sum_probs=209.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ...++|.+.+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|+.+++.++||||+++++++.      ...
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~  256 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEP  256 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCc
Confidence            34568999999999999999999986 46779999997443 34577899999999999999999999863      345


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++.......+++..++.++.|++.||.|||++   +++||||||+||+++.++.+||+|||+++.
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV  333 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence            79999999999999999865444567788899999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....       .........++..|+|||++.+..++.++||||||+++|||++ |..||......  .....+..... 
T Consensus       334 ~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~-  403 (454)
T 1qcf_A          334 IEDN-------EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYR-  403 (454)
T ss_dssp             BCCH-------HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTCC-
T ss_pred             cCCC-------ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-
Confidence            5211       0111122345678999999998899999999999999999999 99999764221  11111111100 


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                             .           ..+..++..+.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus       404 -------~-----------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          404 -------M-----------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             -------C-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             -------C-----------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence                   0           011245678999999999999999999999999999886543


No 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=2.2e-45  Score=325.01  Aligned_cols=263  Identities=21%  Similarity=0.308  Sum_probs=200.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-hhHHHHHHHHHHHHcCCCCCcceeeceeecccC------
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITICSSIDF------  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------  101 (331)
                      .++|.+.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.....      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            4579999999999999999999999999999999975443 345778999999999999999999998754321      


Q ss_pred             ----------------------------------------------CCcceeeEEEeecCCCCHHHHHHhccC-CccchH
Q 046639          102 ----------------------------------------------EGFDFKAIVFEYMQNRNLEQWLRQSNG-QLRFLT  134 (331)
Q Consensus       102 ----------------------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~  134 (331)
                                                                    ......++|||++++++|.+++..... ......
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                          112347999999999999999987432 223344


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcc----cccCCceeeccccc
Q 046639          135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA----ETASNSIEIKGIVG  210 (331)
Q Consensus       135 ~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~~t~~  210 (331)
                      .++.++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++............    ..........||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            5789999999999999999   9999999999999999999999999999876332211110    00122334568999


Q ss_pred             ccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHH
Q 046639          211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDC  290 (331)
Q Consensus       211 y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (331)
                      |+|||++.+..++.++||||||+++|+|++|..|+...       .......     ....           ........
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~-----~~~~-----------~~~~~~~~  298 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDV-----RNLK-----------FPLLFTQK  298 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHH-----HTTC-----------CCHHHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHh-----hccC-----------CCcccccC
Confidence            99999999999999999999999999999987765321       0111000     0000           01223455


Q ss_pred             HHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          291 LVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       291 ~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .+.+.+|+.+||+.||.+|||+.++++
T Consensus       299 ~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          299 YPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            667889999999999999999999985


No 105
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.3e-45  Score=319.48  Aligned_cols=259  Identities=23%  Similarity=0.351  Sum_probs=204.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++     ......
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   94 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI   94 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence            3457999999999999999999887 667899999974432 335688999999999999999999995     455678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++.... ..+++..++.++.|++.||.+||++   +++|+||||+||+++.++.++|+|||++...
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccc
Confidence            99999999999999997633 2477889999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...       .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  ..........   
T Consensus       171 ~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~---  238 (283)
T 3gen_A          171 LDD-------EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGL---  238 (283)
T ss_dssp             CCH-------HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTC---
T ss_pred             ccc-------ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhccc---
Confidence            211       1112223346778999999998899999999999999999998 99999754221  1111111110   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                           ...           ....++..+.+++.+||+.||.+|||+.++++.|+.+.+.
T Consensus       239 -----~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          239 -----RLY-----------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             -----CCC-----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----CCC-----------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                 000           0112345788999999999999999999999999988754


No 106
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.3e-45  Score=319.34  Aligned_cols=261  Identities=20%  Similarity=0.273  Sum_probs=199.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCC---CceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDES---RSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+.+.||+|+||+||+|.+..+   +..||+|.+... .....+.+.+|+.+++.++||||+++++++.      
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------   86 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------   86 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence            356899999999999999999998643   456999988643 3344567899999999999999999999852      


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+..++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~  162 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL  162 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred             cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence            245789999999999999997643 3477888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +.......       ........+++.|+|||++.+..++.++||||||+++|+|++ |..||.......  ....+...
T Consensus       163 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~  233 (281)
T 1mp8_A          163 SRYMEDST-------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENG  233 (281)
T ss_dssp             -----------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTT
T ss_pred             ccccCccc-------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcC
Confidence            98752211       111223346778999999988899999999999999999996 999997643221  11111110


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ..        .           .....++..+.+++.+||+.||++|||+.++++.|+.+.+.-
T Consensus       234 ~~--------~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          234 ER--------L-----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             CC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CC--------C-----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            00        0           111235677899999999999999999999999999987653


No 107
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=6.1e-46  Score=342.39  Aligned_cols=248  Identities=21%  Similarity=0.299  Sum_probs=202.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+++.||+|+||+||+|++..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ....
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~   89 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPS   89 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECC
Confidence            458999999999999999999999999999999996442   22346788999999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++++++|.+++...  ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||++.
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~  164 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN  164 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchh
Confidence            789999999999999999653  3478899999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....         ........||+.|+|||++.+..+ +.++||||||+++|+|++|..||...... ..........  
T Consensus       165 ~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~--  232 (476)
T 2y94_A          165 MMSD---------GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKICDGI--  232 (476)
T ss_dssp             ECCT---------TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHHHHHTTC--
T ss_pred             hccc---------cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHHHHhcCC--
Confidence            7521         122234568999999999998776 78999999999999999999999753211 1111111100  


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                         ...+..+...+.+|+.+||+.||.+|||+.++++
T Consensus       233 -------------------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          233 -------------------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -------------------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                               0111123457889999999999999999999986


No 108
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-45  Score=320.50  Aligned_cols=252  Identities=21%  Similarity=0.271  Sum_probs=195.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--------------------------hhHHHHHHHHHHHH
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--------------------------EASRSFAAECNALR   82 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~   82 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999864421                          12345889999999


Q ss_pred             cCCCCCcceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 046639           83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD  162 (331)
Q Consensus        83 ~l~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~d  162 (331)
                      .++||||+++++++..   ......++|||++++++|.+++..   ..+++..+..++.|++.||.|||++   +++|+|
T Consensus        92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccC
Confidence            9999999999999753   235678999999999999886532   3578899999999999999999999   999999


Q ss_pred             CCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCC---CccchhhHhHHHHHHHHH
Q 046639          163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK---ASVSGDVYNFGILLLEMF  239 (331)
Q Consensus       163 ik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~DiwslG~il~el~  239 (331)
                      |||+||+++.++.+||+|||++......        ........||+.|+|||++.+..   ++.++||||||+++|+|+
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~  234 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGS--------DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV  234 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSS--------SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEECCCCCEEEecCCCccccccc--------cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH
Confidence            9999999999999999999999865211        11123356899999999988765   478899999999999999


Q ss_pred             hCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          240 TRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       240 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      +|..||.....  .............    .  +            ....++..+.+|+.+||+.||++|||+.++++
T Consensus       235 ~g~~pf~~~~~--~~~~~~~~~~~~~----~--~------------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          235 FGQCPFMDERI--MCLHSKIKSQALE----F--P------------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HSSCSSCCSSH--HHHHHHHHHCCCC----C--C------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HCCCCCCCccH--HHHHHHHhcccCC----C--C------------CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            99999975311  1111111110000    0  0            00124567899999999999999999999874


No 109
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=7e-46  Score=328.68  Aligned_cols=268  Identities=19%  Similarity=0.288  Sum_probs=212.2

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeecCCCc-----eEEEEEeeccc-hhhHHHHHHHHHHHHcC-CCCCcceeeceeec
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILDESRS-----IVAVKVVNLKQ-KEASRSFAAECNALRNI-RHRNLIKIITICSS   98 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   98 (331)
                      ....++|.+.+.||+|+||+||+|.+..++.     .||+|.+.... ......+.+|+.+++.+ +||||+++++++  
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--  119 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC--  119 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE--
Confidence            3456789999999999999999999876554     79999986543 33456789999999999 899999999995  


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhcc------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSN------------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS  166 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~  166 (331)
                         ...+..++|||++++++|.+++....            ...+++..++.++.|++.||.|||+.   +++|+||||+
T Consensus       120 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~  193 (333)
T 2i1m_A          120 ---THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR  193 (333)
T ss_dssp             ---CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred             ---ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccc
Confidence               44567899999999999999997642            33467888999999999999999999   9999999999


Q ss_pred             CEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCC
Q 046639          167 NILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPT  245 (331)
Q Consensus       167 nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf  245 (331)
                      ||+++.++.++|+|||++........      ........+|+.|+|||++.+..++.++||||||+++|+|++ |..||
T Consensus       194 NIl~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  267 (333)
T 2i1m_A          194 NVLLTNGHVAKIGDFGLARDIMNDSN------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY  267 (333)
T ss_dssp             GCEEEGGGEEEBCCCGGGCCGGGCTT------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             eEEECCCCeEEECccccccccccccc------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999986522111      111223446778999999988899999999999999999998 99999


Q ss_pred             CcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          246 DAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ....... ............        .           ....++..+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus       268 ~~~~~~~-~~~~~~~~~~~~--------~-----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          268 PGILVNS-KFYKLVKDGYQM--------A-----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             TTCCSSH-HHHHHHHHTCCC--------C-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccchhH-HHHHHHhcCCCC--------C-----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            7643322 222222211110        0           0112346788999999999999999999999999998776


Q ss_pred             hh
Q 046639          326 FL  327 (331)
Q Consensus       326 ~~  327 (331)
                      ..
T Consensus       328 ~~  329 (333)
T 2i1m_A          328 DR  329 (333)
T ss_dssp             HH
T ss_pred             hh
Confidence            43


No 110
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=3.2e-45  Score=316.16  Aligned_cols=253  Identities=19%  Similarity=0.190  Sum_probs=204.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ...++|.+.+.||+|+||+||+|.+..++..+|+|.+........+.+.+|+.+++.++||||+++++++     .....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~   80 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTD   80 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCe
Confidence            3456899999999999999999999999999999999766555667889999999999999999999995     44567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGL  183 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg~  183 (331)
                      .++|||++++++|.+++....  .+++..+..++.|++.||.+||++   +++|+||||+||++   +.++.++|+|||+
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~  155 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGL  155 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence            899999999999999987643  367889999999999999999999   99999999999999   7888999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.....         ........+|+.|+|||++.+. ++.++||||||+++|+|++|..||...... ...........
T Consensus       156 ~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~  224 (277)
T 3f3z_A          156 AARFKP---------GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGTF  224 (277)
T ss_dssp             CEECCT---------TSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC
T ss_pred             ceeccC---------ccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCC
Confidence            976521         1222345689999999998764 899999999999999999999999753211 11111111111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...                 ......++..+.+++.+||+.||.+|||+.++++
T Consensus       225 ~~~-----------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          225 TFP-----------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CCC-----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCC-----------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000                 0011134567899999999999999999999985


No 111
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.8e-45  Score=322.83  Aligned_cols=266  Identities=20%  Similarity=0.213  Sum_probs=200.7

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++.     .
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~  105 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-----I  105 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----E
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-----e
Confidence            44578999999999999999999999899999999986442   333477889999999999999999999954     3


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+..++|||++++++|.+++....  .+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||+
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~  180 (309)
T 2h34_A          106 DGQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGI  180 (309)
T ss_dssp             TTEEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC
T ss_pred             CCeEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCcc
Confidence            567899999999999999997643  467889999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +......       .........+++.|+|||++.+..++.++||||||+++|+|++|..||......  ..........
T Consensus       181 ~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~  251 (309)
T 2h34_A          181 ASATTDE-------KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI  251 (309)
T ss_dssp             -----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC
T ss_pred             Ccccccc-------ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC
Confidence            8765211       111223456889999999999999999999999999999999999999753211  1111111111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-cHHHHHHHHHHhhhhhhc
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-EMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-s~~~i~~~L~~~~~~~~~  328 (331)
                      +.       +          ......++..+.+++.+||+.||++|| |+.++++.|+.+......
T Consensus       252 ~~-------~----------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~  300 (309)
T 2h34_A          252 PR-------P----------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ  300 (309)
T ss_dssp             CC-------G----------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred             CC-------c----------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence            00       0          011123456788999999999999999 999999999988765543


No 112
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=2.4e-45  Score=323.73  Aligned_cols=253  Identities=18%  Similarity=0.246  Sum_probs=204.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh------hHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE------ASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++......      ..+.+.+|+.+++.++||||+++++++     
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----   84 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-----   84 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----
Confidence            345799999999999999999999999999999999654321      346788999999999999999999995     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC----cEE
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI----VAH  177 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~----~~k  177 (331)
                      ......++|||++++++|.+++...  ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++    .++
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~k  159 (321)
T 2a2a_A           85 ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK  159 (321)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred             ecCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEE
Confidence            4456789999999999999999753  3578899999999999999999999   999999999999999888    799


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHH
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHE  257 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  257 (331)
                      |+|||++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||...... .....
T Consensus       160 l~Dfg~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~  229 (321)
T 2a2a_A          160 LIDFGLAHEIED---------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLAN  229 (321)
T ss_dssp             ECCCTTCEECCT---------TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHH
T ss_pred             EccCccceecCc---------cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence            999999986522         11223445899999999999999999999999999999999999999753211 11111


Q ss_pred             HHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          258 FVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......          ...       ......++..+.+|+.+||+.||++|||+.++++
T Consensus       230 i~~~~~----------~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          230 ITSVSY----------DFD-------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHTTCC----------CCC-------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHhccc----------ccC-------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            100000          000       0112234567899999999999999999999985


No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=5.4e-46  Score=320.65  Aligned_cols=247  Identities=25%  Similarity=0.365  Sum_probs=181.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++.     ..+
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   86 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD   86 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCC
Confidence            358999999999999999999999999999999986442   333567889999999999999999999953     456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++ +++|.+.+....  .+++..+..++.|++.||.+||+.   +++|+||||+||+++.++.+||+|||++.
T Consensus        87 ~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  160 (275)
T 2eue_A           87 EIIMVIEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN  160 (275)
T ss_dssp             CEEEEEECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred             eEEEEehhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccce
Confidence            789999999 789998886543  477899999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....         ........+|+.|+|||++.+..+ +.++||||||+++|+|++|..||.....  ........... 
T Consensus       161 ~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~-  228 (275)
T 2eue_A          161 IMTD---------GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNGV-  228 (275)
T ss_dssp             -----------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC-
T ss_pred             eccC---------cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC-
Confidence            6521         122233458899999999988775 7899999999999999999999975321  11111111110 


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                         ..++..++..+.+|+.+||+.||.+|||+.|+++
T Consensus       229 -------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          229 -------------------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -------------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -------------------CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence                               0111234567889999999999999999999975


No 114
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.5e-45  Score=317.83  Aligned_cols=269  Identities=22%  Similarity=0.340  Sum_probs=209.0

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCc---eEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRS---IVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      -.|.+.+.||+|+||+||+|.+..++.   .||+|.+.... ....+.+.+|+.+++.++||||+++++++.    ....
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~   96 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEG   96 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSS
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCC
Confidence            357777999999999999999754443   79999986433 344577899999999999999999999963    2334


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++.+++|.+++... ...+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.+||+|||++.
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~  172 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR  172 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred             CcEEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence            458999999999999999763 34567888999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ......    ...........+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... ..............
T Consensus       173 ~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~  247 (298)
T 3pls_A          173 DILDRE----YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGRRL  247 (298)
T ss_dssp             TTTTGG----GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTCCC
T ss_pred             cccCCc----ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCCCC
Confidence            652211    1112223344578889999999999999999999999999999995555432221 11222222111100


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhcCC
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLGTR  330 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~~~  330 (331)
                                         .....++..+.+++.+||+.||.+|||+.++++.|+++.+.+.+..
T Consensus       248 -------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~  293 (298)
T 3pls_A          248 -------------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH  293 (298)
T ss_dssp             -------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred             -------------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence                               0112245678999999999999999999999999999999987764


No 115
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.5e-45  Score=337.86  Aligned_cols=283  Identities=19%  Similarity=0.232  Sum_probs=193.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+++.||+|+||+||+|++..+++.||||++...  .....+.+.+|+.+++.++||||+++++++..........
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            46899999999999999999999999999999998543  3444577899999999999999999999986655566678


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      +++|||++ +++|.+++...  ..+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence            99999998 78999999653  3478899999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcc-------------------cccCCceeecccccccCCccc-CCCCCccchhhHhHHHHHHHHHh------
Q 046639          187 LFGYEPGTAA-------------------ETASNSIEIKGIVGYVAPEYG-MGSKASVSGDVYNFGILLLEMFT------  240 (331)
Q Consensus       187 ~~~~~~~~~~-------------------~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~------  240 (331)
                      ..........                   ..........||+.|+|||++ .+..++.++|||||||++|||++      
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence            6322211100                   001223445689999999976 56679999999999999999998      


Q ss_pred             -----CCCCCCcccCCc-------------------chHHHHHHhhC--cchhhhhcCc--------ccccccccCCcch
Q 046639          241 -----RRRPTDAMFNEG-------------------LTLHEFVKMAL--PDKVMEIVDP--------SLLLEVTANNYSW  286 (331)
Q Consensus       241 -----g~~pf~~~~~~~-------------------~~~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~~~  286 (331)
                           |.++|++...-.                   ..+..+.....  +.........        .............
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER  365 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence                 666665432100                   00000000000  0000000000        0000000001111


Q ss_pred             HHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          287 IEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       287 ~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...+...+.+|+.+||+.||.+|||+.|+++
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            2234677899999999999999999999986


No 116
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.9e-45  Score=331.40  Aligned_cols=280  Identities=20%  Similarity=0.302  Sum_probs=196.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEG  103 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  103 (331)
                      ...++|.+++.||+|+||+||+|.+..+++.||+|++...  .......+.+|+.+++.+. ||||+++++++..   .+
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~   82 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DN   82 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TT
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CC
Confidence            3457899999999999999999999999999999998532  3445567889999999997 9999999999753   33


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ...+++|||+++ ++|.+++...   .++...+..++.|++.||.|||+.   ||+||||||+||+++.++.+||+|||+
T Consensus        83 ~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           83 DRDVYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             SSCEEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCEEEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            457899999995 6999999763   467788889999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCc-------------ccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCccc
Q 046639          184 AKFLFGYEPGTA-------------AETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMF  249 (331)
Q Consensus       184 a~~~~~~~~~~~-------------~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~  249 (331)
                      ++.+........             ...........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+..
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            987633211110             011122344679999999999887 678999999999999999999999997642


Q ss_pred             CCcchHHHHHHhhCcchhh--hhcCccccc--------cc---ccCCcchH-------------HHHHHHHHHhhccccC
Q 046639          250 NEGLTLHEFVKMALPDKVM--EIVDPSLLL--------EV---TANNYSWI-------------EDCLVAVIGTGVTCSM  303 (331)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~---~~~~~~~~-------------~~~~~~l~~l~~~cl~  303 (331)
                      . ...+..+..........  .........        ..   ........             ..+...+.+|+.+||+
T Consensus       236 ~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~  314 (388)
T 3oz6_A          236 T-MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ  314 (388)
T ss_dssp             H-HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred             H-HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence            2 11222222111110000  000000000        00   00000000             0345678999999999


Q ss_pred             CCCCCCCcHHHHHH
Q 046639          304 ESPMERMEMRDVVA  317 (331)
Q Consensus       304 ~~P~~Rps~~~i~~  317 (331)
                      .||++|||+.++++
T Consensus       315 ~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          315 FNPNKRISANDALK  328 (388)
T ss_dssp             SSGGGSCCHHHHTT
T ss_pred             cCcccCCCHHHHhC
Confidence            99999999999975


No 117
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-45  Score=328.70  Aligned_cols=269  Identities=19%  Similarity=0.240  Sum_probs=204.8

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc-----chhhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      +....++|.+.+.||+|+||+||+|.+..+++.||+|++...     .......+.+|+.+++.++||||+++++++   
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~---   97 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY---   97 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh---
Confidence            345667899999999999999999999999999999998643     234457789999999999999999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhc--------------------------------------cCCccchHHHHHHHH
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQS--------------------------------------NGQLRFLTQRVNIAI  141 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------~~~~~~~~~~~~~~~  141 (331)
                        ...+..++|||++++++|.+++...                                      ....+++..++.++.
T Consensus        98 --~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  175 (345)
T 3hko_A           98 --EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR  175 (345)
T ss_dssp             --ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred             --ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence              4456789999999999999998521                                      012235677888999


Q ss_pred             HHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC--cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC
Q 046639          142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI--VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG  219 (331)
Q Consensus       142 ~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  219 (331)
                      |++.||.|||++   +++|+||||+||+++.++  .+||+|||++..+......    .........||+.|+|||++.+
T Consensus       176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTC
T ss_pred             HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc----ccccccccCCCccccCchhhcc
Confidence            999999999999   999999999999998776  8999999999865322211    1112334568999999999875


Q ss_pred             --CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHh
Q 046639          220 --SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGT  297 (331)
Q Consensus       220 --~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  297 (331)
                        ..++.++||||||+++|+|++|..||...... .............     ..            .....++..+.+|
T Consensus       249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~-----~~------------~~~~~~~~~~~~l  310 (345)
T 3hko_A          249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCF-----EN------------PNYNVLSPLARDL  310 (345)
T ss_dssp             SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCT-----TS------------GGGGGSCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhccccc-----CC------------cccccCCHHHHHH
Confidence              67899999999999999999999999754221 1111111111100     00            1112345678999


Q ss_pred             hccccCCCCCCCCcHHHHHH--HHHHhh
Q 046639          298 GVTCSMESPMERMEMRDVVA--KLRHAR  323 (331)
Q Consensus       298 ~~~cl~~~P~~Rps~~~i~~--~L~~~~  323 (331)
                      +.+||+.||.+|||+.++++  +++...
T Consensus       311 i~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          311 LSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            99999999999999999986  344443


No 118
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=3.1e-46  Score=324.35  Aligned_cols=254  Identities=19%  Similarity=0.308  Sum_probs=202.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCC-------ceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESR-------SIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      .++|.+.+.||+|+||+||+|.+..++       ..||+|++........+.+.+|+.+++.++||||+++++++     
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----   81 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC-----   81 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-----
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----
Confidence            457999999999999999999998666       47999999766666678899999999999999999999995     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc------
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV------  175 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~------  175 (331)
                      ...+..++|||++++++|.+++.... ..+++..++.++.|++.||.|||++   +++|+||||+||+++.++.      
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~  157 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP  157 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence            44567799999999999999997643 2367788999999999999999999   9999999999999998886      


Q ss_pred             --EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCC-CCCCcccCC
Q 046639          176 --AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR-RPTDAMFNE  251 (331)
Q Consensus       176 --~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~-~pf~~~~~~  251 (331)
                        ++|+|||++...            .......+|+.|+|||++.+ ..++.++||||||+++|+|++|. +||.... .
T Consensus       158 ~~~kl~Dfg~~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-~  224 (289)
T 4fvq_A          158 PFIKLSDPGISITV------------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-S  224 (289)
T ss_dssp             CEEEECCCCSCTTT------------SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-H
T ss_pred             ceeeeccCcccccc------------cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-h
Confidence              999999998654            11223457888999999987 67899999999999999999955 4444321 1


Q ss_pred             cchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          252 GLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                       ...........          ...           ..++..+.+|+.+||+.||.+|||+.++++.|+.+...-
T Consensus       225 -~~~~~~~~~~~----------~~~-----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          225 -QRKLQFYEDRH----------QLP-----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             -HHHHHHHHTTC----------CCC-----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             -HHHHHHhhccC----------CCC-----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence             11111111100          000           011345788999999999999999999999999886643


No 119
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.5e-45  Score=320.07  Aligned_cols=272  Identities=22%  Similarity=0.346  Sum_probs=210.5

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeecC---CCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILDE---SRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      .....+|.+.+.||+|+||+||+|.+..   +...+|+|.+... .......+.+|+.++++++||||++++++|    .
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----~   96 (298)
T 3f66_A           21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----L   96 (298)
T ss_dssp             CGGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE----C
T ss_pred             CccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE----E
Confidence            3455679999999999999999999753   3346899988643 344557789999999999999999999987    3


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEccc
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDL  181 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Df  181 (331)
                      ...+..++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.+||+||
T Consensus        97 ~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df  172 (298)
T 3f66_A           97 RSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF  172 (298)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred             cCCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence            44567899999999999999997533 3467788999999999999999999   9999999999999999999999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHH
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVK  260 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~  260 (331)
                      |++.......    ...........+|+.|+|||.+.+..++.++||||||+++|+|++ |.+||.......  ......
T Consensus       173 g~a~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~  246 (298)
T 3f66_A          173 GLARDMYDKE----YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLL  246 (298)
T ss_dssp             GGGCCCSCGG----GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHH
T ss_pred             cccccccccc----hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHh
Confidence            9998652211    111122334457788999999998899999999999999999999 666675532221  111111


Q ss_pred             hhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhcCC
Q 046639          261 MALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLGTR  330 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~~~  330 (331)
                      .....                   .....++..+.+++.+||+.||.+|||+.++++.|+.+...+.+..
T Consensus       247 ~~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~~  297 (298)
T 3f66_A          247 QGRRL-------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH  297 (298)
T ss_dssp             TTCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCSC
T ss_pred             cCCCC-------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccCC
Confidence            11000                   0011234678999999999999999999999999999999887653


No 120
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=6.5e-46  Score=322.81  Aligned_cols=270  Identities=22%  Similarity=0.302  Sum_probs=210.2

Q ss_pred             HHHHHHhcCCCcCc-eeeccCeeEEEEeee--cCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceee
Q 046639           23 AELSKATNNFSPAN-KIGQGGVSIVYKGIL--DESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICS   97 (331)
Q Consensus        23 ~~~~~~~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   97 (331)
                      .++....++|.+.+ .||+|+||+||+|.+  ..+++.||+|++....  ....+.+.+|+.+++.++||||+++++++.
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   88 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE   88 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC
Confidence            44445567899988 999999999999954  5677899999986442  333567899999999999999999999862


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEE
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH  177 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~k  177 (331)
                            .+..++|||++++++|.+++....  .++...++.++.|++.||.+||+.   +++|+||||+||+++.++.++
T Consensus        89 ------~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k  157 (291)
T 1xbb_A           89 ------AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAK  157 (291)
T ss_dssp             ------SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred             ------CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEE
Confidence                  345789999999999999997643  477889999999999999999999   999999999999999999999


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHH
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLH  256 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~  256 (331)
                      |+|||++.......     ..........+++.|+|||++.+..++.++||||||+++|+|++ |..||.....  ....
T Consensus       158 l~Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~  230 (291)
T 1xbb_A          158 ISDFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVT  230 (291)
T ss_dssp             ECCCTTCEECCTTC-----SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHH
T ss_pred             EccCCcceeeccCC-----CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHH
Confidence            99999998652211     11111222335678999999988889999999999999999999 9999975422  1111


Q ss_pred             HHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhcC
Q 046639          257 EFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLGT  329 (331)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~~  329 (331)
                      .......        .+           .....++..+.+++.+||+.||.+|||+.+|++.|+.+.....+.
T Consensus       231 ~~~~~~~--------~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~  284 (291)
T 1xbb_A          231 AMLEKGE--------RM-----------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE  284 (291)
T ss_dssp             HHHHTTC--------CC-----------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCC--------CC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence            1111110        00           111235667999999999999999999999999999998876653


No 121
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=6.1e-46  Score=319.54  Aligned_cols=251  Identities=24%  Similarity=0.352  Sum_probs=192.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch----hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK----EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+.+.||+|+||+||+|.+.  +..||+|++.....    ...+.+.+|+.+++.++||||+++++++     ...
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKE   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecC
Confidence            458999999999999999999985  78899999864432    2246788999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCC---eeecCCCCCCEEecC--------C
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS---IVHGDLKPSNILLDQ--------D  173 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~---ivH~dik~~nilv~~--------~  173 (331)
                      +..++|||++++++|.+++..   ..+++..++.++.|++.||.+||++   +   ++|+||||+||+++.        +
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~  152 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSN  152 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSS
T ss_pred             CceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccC
Confidence            678999999999999999853   3477889999999999999999999   7   999999999999986        7


Q ss_pred             CcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc
Q 046639          174 IVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL  253 (331)
Q Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  253 (331)
                      +.++|+|||++.....          .......+|+.|+|||++.+..++.++||||||+++|+|++|..||....... 
T Consensus       153 ~~~kl~Dfg~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-  221 (271)
T 3dtc_A          153 KILKITDFGLAREWHR----------TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-  221 (271)
T ss_dssp             CCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH-
T ss_pred             cceEEccCCccccccc----------ccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            7899999999976521          11223468899999999998899999999999999999999999997542111 


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                       ........           ....       .....++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       222 -~~~~~~~~-----------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          222 -VAYGVAMN-----------KLAL-------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             -HHHHHHTS-----------CCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             -HHHhhhcC-----------CCCC-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence             11100000           0000       11123456799999999999999999999999999764


No 122
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.9e-45  Score=343.95  Aligned_cols=255  Identities=24%  Similarity=0.286  Sum_probs=207.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||.||+|++..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ...
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeC
Confidence            3567999999999999999999999999999999996432   22345678999999999999999999985     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +.+++||||+++++|.+++.......+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||++
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla  333 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA  333 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccc
Confidence            6899999999999999999876655688899999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      .....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||........ ..........
T Consensus       334 ~~~~~---------~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i~~  403 (576)
T 2acx_A          334 VHVPE---------GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE  403 (576)
T ss_dssp             EECCT---------TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHHHH
T ss_pred             eeccc---------CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHhhc
Confidence            86521         1122345799999999999999999999999999999999999999976432211 1111111000


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~  317 (331)
                            ...           .+...++..+.+|+.+||+.||.+||     ++.+|++
T Consensus       404 ------~~~-----------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          404 ------VPE-----------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             ------CCC-----------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ------ccc-----------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                  000           11123456789999999999999999     7788864


No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3.6e-45  Score=328.62  Aligned_cols=247  Identities=17%  Similarity=0.175  Sum_probs=195.7

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeEEEeec
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYM  114 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~  114 (331)
                      .+.||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++||||+++++++     ...+..++||||+
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~  168 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV  168 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence            56899999999999999999999999999876666667899999999999999999999995     4456789999999


Q ss_pred             CCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe--cCCCcEEEcccCcccccccCCC
Q 046639          115 QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL--DQDIVAHVGDLGLAKFLFGYEP  192 (331)
Q Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv--~~~~~~kl~Dfg~a~~~~~~~~  192 (331)
                      ++++|.+++.... ..+++..+..++.|++.||.|||+.   +|+|+||||+||++  +.++.+||+|||++.....   
T Consensus       169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~---  241 (373)
T 2x4f_A          169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP---  241 (373)
T ss_dssp             TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT---
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC---
Confidence            9999999887533 3467788899999999999999999   99999999999999  5678999999999987521   


Q ss_pred             CCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcC
Q 046639          193 GTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVD  272 (331)
Q Consensus       193 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (331)
                            ........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ...+..+.......      .
T Consensus       242 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~------~  308 (373)
T 2x4f_A          242 ------REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWDL------E  308 (373)
T ss_dssp             ------TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCCS------C
T ss_pred             ------ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCC------C
Confidence                  1112234589999999999999999999999999999999999999975421 11122222211100      0


Q ss_pred             cccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          273 PSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .           .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       309 ~-----------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          309 D-----------EEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             S-----------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             h-----------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0           111234567899999999999999999999987


No 124
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=8.9e-45  Score=314.41  Aligned_cols=253  Identities=19%  Similarity=0.261  Sum_probs=203.5

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++....  ......+.+|+.+++.++||||+++++++     ...+
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   78 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEES   78 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCC
Confidence            3578999999999999999999999999999999986443  33456788999999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc---EEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV---AHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~---~kl~Dfg  182 (331)
                      ..++|||++++++|.+.+....  .++...+..++.|++.||.+||+.   +++|+||||+||+++.++.   ++|+|||
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg  153 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG  153 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             EEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence            7899999999999999887653  477889999999999999999999   9999999999999986655   9999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++.....         ........+|+.|+|||++.+..++.++||||||+++|+|++|..||.....  ..........
T Consensus       154 ~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~  222 (284)
T 3kk8_A          154 LAIEVND---------SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAG  222 (284)
T ss_dssp             TCEECCS---------SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred             eeEEccc---------CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHHhc
Confidence            9976521         1222335689999999999999999999999999999999999999965321  1111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....    ..            .....++..+.+++.+||+.||++|||+.++++
T Consensus       223 ~~~~----~~------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          223 AYDY----PS------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CCCC----CT------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccC----Cc------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            1000    00            011234567889999999999999999999986


No 125
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.1e-45  Score=320.08  Aligned_cols=258  Identities=20%  Similarity=0.291  Sum_probs=208.5

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccC------
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDF------  101 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------  101 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|.+.....    .+.+|+.+++.++||||+++++++....+      
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            45679999999999999999999998999999999975543    35689999999999999999998754221      


Q ss_pred             -----CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcE
Q 046639          102 -----EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA  176 (331)
Q Consensus       102 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~  176 (331)
                           ......++|||++++++|.+++.......+++..++.++.|++.||.+||++   +++|+||||+||+++.++.+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence                 2245689999999999999999876656688899999999999999999999   99999999999999999999


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHH
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLH  256 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  256 (331)
                      +|+|||++......         .......+|+.|+|||++.+..++.++||||||+++|+|++|..||...       .
T Consensus       162 kl~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~  225 (284)
T 2a19_B          162 KIGDFGLVTSLKND---------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------S  225 (284)
T ss_dssp             EECCCTTCEESSCC---------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------H
T ss_pred             EECcchhheecccc---------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------H
Confidence            99999999865221         1222345889999999999989999999999999999999999887431       0


Q ss_pred             HHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          257 EFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      ......        ......           ..++..+.+++.+||+.||.+|||+.++++.|+.+.++..
T Consensus       226 ~~~~~~--------~~~~~~-----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          226 KFFTDL--------RDGIIS-----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHHH--------HTTCCC-----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             HHHHHh--------hccccc-----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            111100        000000           1134567899999999999999999999999999877654


No 126
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=8.2e-46  Score=327.22  Aligned_cols=260  Identities=18%  Similarity=0.277  Sum_probs=202.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCce----EEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSI----VAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      .++|.+.+.||+|+||+||+|.+..++..    ||+|.+.... ......+.+|+.+++.++||||+++++++.      
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------
Confidence            35799999999999999999999877765    7777764332 222345678999999999999999999863      


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++.+++|.+++.... ..+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~  161 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV  161 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred             CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence            245789999999999999997642 3577888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++......      .........++..|+|||++.+..++.++||||||+++|+|++ |..||......  .........
T Consensus       162 a~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~  233 (325)
T 3kex_A          162 ADLLPPDD------KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKG  233 (325)
T ss_dssp             GGGSCCCT------TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTT
T ss_pred             ccccCccc------ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcC
Confidence            98762211      1122234457788999999998899999999999999999999 99999764322  222222111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ...                   .....++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       234 ~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          234 ERL-------------------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             CBC-------------------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             CCC-------------------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            100                   00112344577899999999999999999999999988654


No 127
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=4.4e-45  Score=314.96  Aligned_cols=255  Identities=20%  Similarity=0.248  Sum_probs=205.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++.     ..+.
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   79 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNI   79 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCE
Confidence            4568999999999999999999999899999999996543 334567889999999999999999999853     4567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++...  ..++...+..++.|++.||.+||+.   +++|+||+|+||+++.++.++|+|||++..
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  154 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV  154 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence            89999999999999998543  3577889999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      .....      .........+++.|+|||++.+..+ +.++||||||+++|+|++|..||.........+..+...... 
T Consensus       155 ~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-  227 (276)
T 2yex_A          155 FRYNN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-  227 (276)
T ss_dssp             CEETT------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT-
T ss_pred             cCCCc------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc-
Confidence            52111      1112234568899999999988775 789999999999999999999998654433333222111000 


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                           .             .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       228 -----~-------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          228 -----L-------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             -----S-------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----c-------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                 0             001234567889999999999999999999975


No 128
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.1e-46  Score=335.01  Aligned_cols=250  Identities=22%  Similarity=0.247  Sum_probs=193.1

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHH-HHcCCCCCcceeeceeecccCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNA-LRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      ...++|.+++.||+|+||+||+|++..+++.||+|++....   ......+..|..+ ++.++||||+++++++     .
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~  109 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----Q  109 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----E
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----E
Confidence            34568999999999999999999999999999999996543   2233456667776 5668999999999985     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      ..+..++||||+++++|.+++.+..  .++...+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||
T Consensus       110 ~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG  184 (373)
T 2r5t_A          110 TADKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFG  184 (373)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCc
Confidence            4568999999999999999997643  366788899999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +++....        .........||+.|+|||++.+..++.++||||||+++|||++|..||..... ...+..+....
T Consensus       185 ~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~  255 (373)
T 2r5t_A          185 LCKENIE--------HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-AEMYDNILNKP  255 (373)
T ss_dssp             BCGGGBC--------CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-HHHHHHHHHSC
T ss_pred             ccccccc--------CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhcc
Confidence            9976421        11223456799999999999999999999999999999999999999975321 11111111110


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                      .                     .+...+...+.+|+.+||+.||.+||++.+.+
T Consensus       256 ~---------------------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          256 L---------------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             C---------------------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred             c---------------------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence            0                     11112456788999999999999999986443


No 129
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=328.43  Aligned_cols=276  Identities=17%  Similarity=0.206  Sum_probs=206.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecC---CCceEEEEEeeccchh-----------hHHHHHHHHHHHHcCCCCCcceeec
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDE---SRSIVAVKVVNLKQKE-----------ASRSFAAECNALRNIRHRNLIKIIT   94 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~   94 (331)
                      .++|.+.+.||+|+||+||+|.+..   ++..+|+|++......           ....+..|+..++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            4689999999999999999999986   7889999998754321           1133667888999999999999999


Q ss_pred             eeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC
Q 046639           95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI  174 (331)
Q Consensus        95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~  174 (331)
                      ++... +.+....++|||++ +++|.+++....  .+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++
T Consensus       116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred             ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence            97653 24467889999999 999999997654  578899999999999999999999   999999999999998877


Q ss_pred             --cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          175 --VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       175 --~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                        .+||+|||+++.+...... ............||+.|+|||++.+..++.++||||||+++|+|++|..||.......
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~  267 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNH-KQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP  267 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCC-CCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred             CCcEEEEeCCCceeccccccc-ccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence              9999999999876322111 0111112234568999999999999999999999999999999999999996543332


Q ss_pred             chHHHHHHh---hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          253 LTLHEFVKM---ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       253 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      .........   ..+..+.....              ...++..+.+++.+||+.||++|||+.+|++.|+.+...+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  330 (345)
T 2v62_A          268 VAVQTAKTNLLDELPQSVLKWAP--------------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL  330 (345)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHHSC--------------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred             HHHHHHHHhhcccccHHHHhhcc--------------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence            222221111   11111111000              0134568999999999999999999999999998865443


No 130
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.9e-45  Score=317.85  Aligned_cols=248  Identities=19%  Similarity=0.292  Sum_probs=200.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|.+..++..||+|++....   ......+.+|+.+++.++||||+++++++     ...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   81 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA   81 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence            3467999999999999999999999999999999986432   22346688999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++|||++++++|.+++....  .++...+..++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~  156 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS  156 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecccc
Confidence            67899999999999999997654  367888999999999999999999   9999999999999999999999999988


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....          ........+++.|+|||++.+..++.++||||||+++|+|++|..||.....  ..........  
T Consensus       157 ~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~--  222 (279)
T 3fdn_A          157 VHAP----------SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKRISRV--  222 (279)
T ss_dssp             SCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHT--
T ss_pred             ccCC----------cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--HHHHHHHHhC--
Confidence            6531          1122345688999999999999999999999999999999999999975321  1111111100  


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                             .           ..++..++..+.+|+.+||+.||.+|||+.++++
T Consensus       223 -------~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          223 -------E-----------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             -------C-----------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -------C-----------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                   0           0111224567889999999999999999999985


No 131
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=329.32  Aligned_cols=279  Identities=13%  Similarity=0.100  Sum_probs=210.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecC--------CCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeec--
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDE--------SRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSS--   98 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   98 (331)
                      .++|.+.+.||+|+||+||+|++..        .++.||+|++...     ..+.+|+.+++.++||||+++++....  
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4789999999999999999999987        3789999998644     347789999999999999884332111  


Q ss_pred             ---------ccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEE
Q 046639           99 ---------IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNIL  169 (331)
Q Consensus        99 ---------~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nil  169 (331)
                               .........++|||++ +++|.+++.......+++..++.++.|++.||.|||++   +++|+||||+||+
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl  191 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF  191 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence                     0012356789999999 99999999876455688999999999999999999999   9999999999999


Q ss_pred             ecCCC--cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCc
Q 046639          170 LDQDI--VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA  247 (331)
Q Consensus       170 v~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  247 (331)
                      ++.++  .+||+|||++..+....... ...........||+.|+|||++.+..++.++||||||+++|+|++|..||..
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHV-AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCC-CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccc-cccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            99998  99999999998763221110 0111122334689999999999999999999999999999999999999987


Q ss_pred             ccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          248 MFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      ............... ............          ....++..+.+|+.+||+.||.+|||+.+|++.|+.+.+...
T Consensus       271 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          271 CLPNTEDIMKQKQKF-VDKPGPFVGPCG----------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             GTTCHHHHHHHHHHH-HHSCCCEECTTS----------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             CCcCHHHHHHHHHhc-cCChhhhhhhcc----------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            543322222222111 000000011000          001235679999999999999999999999999999987765


Q ss_pred             c
Q 046639          328 G  328 (331)
Q Consensus       328 ~  328 (331)
                      .
T Consensus       340 ~  340 (352)
T 2jii_A          340 V  340 (352)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 132
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.5e-45  Score=318.45  Aligned_cols=254  Identities=27%  Similarity=0.343  Sum_probs=200.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+.  ++.||+|++...  ...+.+.+|+.+++.++||||+++++++.    ...+..+
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceE
Confidence            457999999999999999999885  789999998643  24567889999999999999999999863    3345789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.......++...++.++.|++.||.+||++   +++|+||||+||+++.++.++|+|||++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            999999999999999876544467788999999999999999999   99999999999999999999999999987542


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      .           ......+++.|+|||++.+..++.++||||||+++|+|++ |..||......  .........     
T Consensus       169 ~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~-----  230 (278)
T 1byg_A          169 S-----------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKG-----  230 (278)
T ss_dssp             ------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTT-----
T ss_pred             c-----------cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcC-----
Confidence            1           1122346778999999988899999999999999999998 99999754221  111111100     


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                         ...           .....++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       231 ---~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          231 ---YKM-----------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             ---CCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---CCC-----------CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence               000           11123567899999999999999999999999999998764


No 133
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=5.9e-46  Score=336.69  Aligned_cols=260  Identities=17%  Similarity=0.189  Sum_probs=204.5

Q ss_pred             HHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeec
Q 046639           22 YAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSS   98 (331)
Q Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   98 (331)
                      ..++....++|.+++.||+|+||+||+|++..+++.||+|++....   ......+.+|..+++.++||||+++++++  
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--  138 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--  138 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence            3455556789999999999999999999999999999999996432   11223477899999999999999999995  


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEE
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV  178 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl  178 (331)
                         .+...+++||||+++|+|.+++...   .+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||
T Consensus       139 ---~~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL  209 (410)
T 3v8s_A          139 ---QDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL  209 (410)
T ss_dssp             ---ECSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred             ---EECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEE
Confidence               4567899999999999999999754   367888999999999999999999   9999999999999999999999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCCC----CccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK----ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      +|||+++.....       .........||+.|+|||++.+..    ++.++||||||+++|+|++|..||..... ...
T Consensus       210 ~DFG~a~~~~~~-------~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~  281 (410)
T 3v8s_A          210 ADFGTCMKMNKE-------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGT  281 (410)
T ss_dssp             CCCTTCEECCTT-------SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHH
T ss_pred             eccceeEeeccC-------CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhH
Confidence            999999865211       111223456999999999987655    88999999999999999999999975321 111


Q ss_pred             HHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCC--CCcHHHHHH
Q 046639          255 LHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPME--RMEMRDVVA  317 (331)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rps~~~i~~  317 (331)
                      +..+.....     ....+.            ...++..+.+|+.+||+.+|.+  ||++.+|++
T Consensus       282 ~~~i~~~~~-----~~~~p~------------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          282 YSKIMNHKN-----SLTFPD------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHTHHH-----HCCCCT------------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHHHhccc-----cccCCC------------cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            222211100     000000            0123567889999999999988  999999974


No 134
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=4.2e-46  Score=342.79  Aligned_cols=250  Identities=20%  Similarity=0.241  Sum_probs=194.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+++.||+|+||.||+|.+..+++.||+|++...   .......+.+|+.+++.++||||+++++++.     ..
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----TH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eC
Confidence            346799999999999999999999999999999999643   2333456788999999999999999999954     45


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH-HCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      +..++||||+++++|.+++....  .+++..+..++.|++.||.|||+ .   +|+||||||+||+++.++.+||+|||+
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~  295 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL  295 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred             CEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence            67899999999999999997644  47788999999999999999998 7   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ++....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||.....  ...........
T Consensus       296 a~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~  365 (446)
T 4ejn_A          296 CKEGIK--------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILMEE  365 (446)
T ss_dssp             CCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC
T ss_pred             ceeccC--------CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHhCC
Confidence            975311        11223346699999999999999999999999999999999999999975321  11111111100


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVA  317 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~  317 (331)
                                          ..++..+++.+.+|+.+||+.||.+||     |+.++++
T Consensus       366 --------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          366 --------------------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             --------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             --------------------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                                011123456789999999999999999     9999875


No 135
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-45  Score=330.42  Aligned_cols=268  Identities=22%  Similarity=0.352  Sum_probs=201.8

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCC---CceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDES---RSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..|.+.+.||+|+||+||+|.+..+   ...||+|.+... .......+.+|+.+++.++||||++++++|    ....+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~----~~~~~  164 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC----LRSEG  164 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE----CCCSS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE----EcCCC
Confidence            3577789999999999999987533   346899988643 344567789999999999999999999987    33446


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++++++|.+++.... ..+++..++.++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++
T Consensus       165 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~  240 (373)
T 3c1x_A          165 SPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR  240 (373)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             CeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence            7799999999999999997543 3467788899999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      .......    ..........+++.|+|||++.+..++.++||||||+++|+|++ |.+||.......  ..........
T Consensus       241 ~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~~  314 (373)
T 3c1x_A          241 DMYDKEF----DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRR  314 (373)
T ss_dssp             ---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTCC
T ss_pred             ccccccc----ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCCC
Confidence            6522111    11112223456788999999999999999999999999999999 778887643222  1111111100


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhcCC
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLGTR  330 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~~~  330 (331)
                              .           ..+..++..+.+++.+||+.||++|||+.++++.|+.+...+.+..
T Consensus       315 --------~-----------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~  361 (373)
T 3c1x_A          315 --------L-----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH  361 (373)
T ss_dssp             --------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             --------C-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence                    0           0012345678999999999999999999999999999998887653


No 136
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.5e-44  Score=318.08  Aligned_cols=280  Identities=21%  Similarity=0.293  Sum_probs=208.2

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC--CCCCcceeeceeecccC
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITICSSIDF  101 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~~i~~~~~~~~~~~~  101 (331)
                      ......++|.+.+.||+|+||.||+|.+.  ++.||+|++.....   .....|.+++...  +||||+++++++... .
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~  104 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKG-T  104 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEES-C
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccC-C
Confidence            33455678999999999999999999985  88999999864322   2344555555554  899999999987543 1


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCEEecCCCcE
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC-----QPSIVHGDLKPSNILLDQDIVA  176 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-----~~~ivH~dik~~nilv~~~~~~  176 (331)
                      ......++|||++++++|.++++..   .+++..++.++.|++.||.|||+..     ..+++|+||||+||+++.++.+
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  181 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC  181 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred             CCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence            2225789999999999999999764   3778899999999999999999751     2389999999999999999999


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccc------hhhHhHHHHHHHHHhC---------
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVS------GDVYNFGILLLEMFTR---------  241 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~------~DiwslG~il~el~~g---------  241 (331)
                      ||+|||++.........    .........||+.|+|||++.+...+..      +||||||+++|+|++|         
T Consensus       182 kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~  257 (337)
T 3mdy_A          182 CIADLGLAVKFISDTNE----VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE  257 (337)
T ss_dssp             EECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             EEEeCCCceeecccccc----ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence            99999999765322111    1111224468999999999988766554      9999999999999999         


Q ss_pred             -CCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHH
Q 046639          242 -RRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLR  320 (331)
Q Consensus       242 -~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~  320 (331)
                       ..||.....................    ..+.....      ....+++..+.+|+.+||+.||.+|||+.+|++.|+
T Consensus       258 ~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  327 (337)
T 3mdy_A          258 YQLPYHDLVPSDPSYEDMREIVCIKK----LRPSFPNR------WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA  327 (337)
T ss_dssp             CCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGG------GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ccccHhhhcCCCCchhhhHHHHhhhc----cCcccccc------chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence             6677655444444333322221111    11111110      112378899999999999999999999999999999


Q ss_pred             Hhhhhh
Q 046639          321 HARETF  326 (331)
Q Consensus       321 ~~~~~~  326 (331)
                      .+.++.
T Consensus       328 ~l~~~~  333 (337)
T 3mdy_A          328 KMSESQ  333 (337)
T ss_dssp             HHHHTT
T ss_pred             HHHhhc
Confidence            998765


No 137
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=6.6e-46  Score=338.83  Aligned_cols=264  Identities=18%  Similarity=0.176  Sum_probs=206.4

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch---hhHHHHHHHHHHHHcCCCCCcceeeceee
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNALRNIRHRNLIKIITICS   97 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   97 (331)
                      +..++....++|.+++.||+|+||+||+|++..+++.||+|++.....   .....+.+|..++..++||||++++++| 
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-  143 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-  143 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence            445566667899999999999999999999999999999999964321   1223378899999999999999999995 


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEE
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH  177 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~k  177 (331)
                          .+.+.+++||||+++|+|.+++.+.. ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+|
T Consensus       144 ----~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vk  215 (437)
T 4aw2_A          144 ----QDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIR  215 (437)
T ss_dssp             ----ECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred             ----eeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEE
Confidence                44577999999999999999997632 3477889999999999999999999   999999999999999999999


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccC-----CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM-----GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                      |+|||+++......       ........||+.|+|||++.     ...++.++||||||+++|||++|..||..... .
T Consensus       216 L~DFGla~~~~~~~-------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-~  287 (437)
T 4aw2_A          216 LADFGSCLKLMEDG-------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-V  287 (437)
T ss_dssp             ECCCTTCEECCTTS-------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-H
T ss_pred             EcchhhhhhcccCC-------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-h
Confidence            99999997652111       11122356999999999986     56789999999999999999999999975321 1


Q ss_pred             chHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCC--CCcHHHHHH
Q 046639          253 LTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPME--RMEMRDVVA  317 (331)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rps~~~i~~  317 (331)
                      ..+..+....     .....+..           ...++..+.+|+.+||+.+|++  ||++.++++
T Consensus       288 ~~~~~i~~~~-----~~~~~p~~-----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          288 ETYGKIMNHK-----ERFQFPTQ-----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHHTHH-----HHCCCCSS-----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHhhhhcc-----ccccCCcc-----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            1122211100     00000110           1124567889999999998888  999999874


No 138
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.6e-45  Score=332.43  Aligned_cols=254  Identities=18%  Similarity=0.249  Sum_probs=194.6

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--------hhHHHHHHHHHHHHcCCCCCcceeeceeec
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--------EASRSFAAECNALRNIRHRNLIKIITICSS   98 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   98 (331)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|++.....        .....+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            456789999999999999999999999999999999864321        11234789999999999999999999853 


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC---c
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI---V  175 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~---~  175 (331)
                           ....++|||++++++|.+++...  ..+++..+..++.|++.||.|||++   +|+||||||+||+++.++   .
T Consensus       211 -----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~  280 (419)
T 3i6u_A          211 -----AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL  280 (419)
T ss_dssp             -----SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCC
T ss_pred             -----cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcce
Confidence                 23468999999999999988543  3578899999999999999999999   999999999999997544   5


Q ss_pred             EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC---CCCccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG---SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                      +||+|||+++...         .........||+.|+|||++.+   ..++.++||||||+++|+|++|..||.......
T Consensus       281 ~kl~DFG~a~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~  351 (419)
T 3i6u_A          281 IKITDFGHSKILG---------ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV  351 (419)
T ss_dssp             EEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC
T ss_pred             EEEeecccceecC---------CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH
Confidence            9999999998652         1122234568999999999864   568899999999999999999999997643332


Q ss_pred             chHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          253 LTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      . .............                ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       352 ~-~~~~i~~~~~~~~----------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          352 S-LKDQITSGKYNFI----------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             C-HHHHHHTTCCCCC----------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H-HHHHHhcCCCCCC----------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            2 2222211110000                0111234567899999999999999999999985


No 139
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.7e-45  Score=322.97  Aligned_cols=276  Identities=23%  Similarity=0.337  Sum_probs=209.5

Q ss_pred             cCC-CcCceeeccCeeEEEEee----ecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           30 NNF-SPANKIGQGGVSIVYKGI----LDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        30 ~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ++| ++++.||+|+||+||++.    +..+++.||+|++.... ......+.+|+.+++.++||||+++++++...   +
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~  106 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---G  106 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---T
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---C
Confidence            345 999999999999997765    44578999999997543 34456789999999999999999999997532   2


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++++|.+++....   +++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||+
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~  180 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL  180 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             CceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence            467899999999999999997643   77889999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +.......     ..........+|..|+|||++.+..++.++||||||+++|+|++|..||......   .........
T Consensus       181 a~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~~~~~~~  252 (318)
T 3lxp_A          181 AKAVPEGH-----EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK---FLELIGIAQ  252 (318)
T ss_dssp             CEECCTTC-----SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCC
T ss_pred             cccccccc-----cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh---hhhhhcccc
Confidence            98752211     1112223345778899999999889999999999999999999999998643111   000000000


Q ss_pred             ----cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhcC
Q 046639          264 ----PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLGT  329 (331)
Q Consensus       264 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~~  329 (331)
                          ...+..........       .....++..+.+|+.+||+.||.+|||+.++++.|+.+.+.+.+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~  315 (318)
T 3lxp_A          253 GQMTVLRLTELLERGERL-------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ  315 (318)
T ss_dssp             HHHHHHHHHHHHHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred             cchhHHHHHHHHhcccCC-------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence                00011111111100       112345678999999999999999999999999999999887653


No 140
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.7e-45  Score=325.29  Aligned_cols=249  Identities=21%  Similarity=0.276  Sum_probs=191.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeec---CCCceEEEEEeeccc----hhhHHHHHHHHHHHHcCCCCCcceeeceeecccC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILD---ESRSIVAVKVVNLKQ----KEASRSFAAECNALRNIRHRNLIKIITICSSIDF  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  101 (331)
                      .++|.+.+.||+|+||+||+|++.   .+++.||+|++....    ......+.+|+.+++.++||||+++++++     
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----   90 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF-----   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----
Confidence            457999999999999999999985   688999999986442    22345578899999999999999999985     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEccc
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDL  181 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Df  181 (331)
                      ...+..++|||++++++|.+++....  .++...+..++.|++.||.|||++   +|+||||||+||+++.++.+||+||
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df  165 (327)
T 3a62_A           91 QTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDF  165 (327)
T ss_dssp             ECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCC
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeC
Confidence            44567899999999999999997643  366788899999999999999999   9999999999999999999999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++.....        .........||+.|+|||++.+..++.++||||||+++|+|++|..||..... ..........
T Consensus       166 g~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~  236 (327)
T 3a62_A          166 GLCKESIH--------DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-KKTIDKILKC  236 (327)
T ss_dssp             SCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHT
T ss_pred             Cccccccc--------CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhC
Confidence            99875411        11122334689999999999999999999999999999999999999975321 1111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~  317 (331)
                      ..                     .++..+...+.+|+.+||+.||.+||     ++.++++
T Consensus       237 ~~---------------------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          237 KL---------------------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             CC---------------------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             CC---------------------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            10                     11122456788999999999999999     6777754


No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=4.1e-45  Score=315.59  Aligned_cols=251  Identities=20%  Similarity=0.321  Sum_probs=183.4

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch---hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.....   .....+.+|+.+++.++||||+++++++     ...
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   83 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDS   83 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECS
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccC
Confidence            34689999999999999999999988999999999964322   2246788999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~  159 (278)
T 3cok_A           84 NYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA  159 (278)
T ss_dssp             SEEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred             CeEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence            67899999999999999997643 3577889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ......        ........+|+.|+|||++.+..++.++||||||+++|+|++|..||........     ....  
T Consensus       160 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~--  224 (278)
T 3cok_A          160 TQLKMP--------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKV--  224 (278)
T ss_dssp             EECC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C--
T ss_pred             eeccCC--------CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHH--
Confidence            865211        1122235688999999999998999999999999999999999999975422110     0000  


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            ...         ....+..++..+.+++.+||+.||.+|||+.++++
T Consensus       225 ------~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          225 ------VLA---------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ------CSS---------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ------hhc---------ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                  000         00111234567889999999999999999999975


No 142
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=7.4e-45  Score=326.02  Aligned_cols=277  Identities=20%  Similarity=0.229  Sum_probs=208.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+++.||+|+||+||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..........
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            3568999999999999999999999999999999986433 334477889999999999999999999987655555567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++ +++|.+++...   .+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||++..
T Consensus       105 ~~iv~e~~-~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          105 VYIVQDLM-ETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEccc-CcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            89999999 46999999764   377889999999999999999999   999999999999999999999999999986


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....     ...........||+.|+|||++.+ ..++.++||||||+++|+|++|..||...... .............
T Consensus       178 ~~~~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~  251 (364)
T 3qyz_A          178 ADPD-----HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGILGSP  251 (364)
T ss_dssp             CCGG-----GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHHHHCSC
T ss_pred             cCCC-----CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHHHhCCC
Confidence            5211     111122234578999999998654 45899999999999999999999999764322 2222222211111


Q ss_pred             hhh---hhcCc---ccccccc----cCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVM---EIVDP---SLLLEVT----ANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~---~~~~~---~~~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...   ...+.   .......    .........+...+.+|+.+||+.||.+|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000   00000   0000000    0000111234567899999999999999999999985


No 143
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.6e-45  Score=313.31  Aligned_cols=258  Identities=22%  Similarity=0.354  Sum_probs=206.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++.++||||+++++++     ...+..+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   79 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC   79 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeE
Confidence            357999999999999999999986 567899999975432 336788999999999999999999995     4456789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++.... ..+++..+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||++....
T Consensus        80 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             EEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccc
Confidence            9999999999999997643 3467888999999999999999999   99999999999999999999999999998652


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      .       ..........+++.|+|||++.+..++.++||||||+++|+|++ |..||.....  ...........    
T Consensus       156 ~-------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i~~~~----  222 (267)
T 3t9t_A          156 D-------DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGF----  222 (267)
T ss_dssp             C-------HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTC----
T ss_pred             c-------ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHHhcCC----
Confidence            1       11111223446778999999988889999999999999999999 8999975321  11111111110    


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                          ..           .....++..+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus       223 ----~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          223 ----RL-----------YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             ----CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----cC-----------CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                00           00112356788999999999999999999999999998764


No 144
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.6e-45  Score=317.01  Aligned_cols=261  Identities=22%  Similarity=0.370  Sum_probs=207.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||+||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.      .+..+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~   83 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIY   83 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcE
Confidence            468999999999999999999976 56689999986443 23467889999999999999999999853      23478


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||++++++|.+++....+..+++..+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||++....
T Consensus        84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence            999999999999999765444577889999999999999999999   99999999999999999999999999998752


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ...       ........++..|+|||++.+..++.++||||||+++|+|++ |..||......  .........     
T Consensus       161 ~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~-----  226 (279)
T 1qpc_A          161 DNE-------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERG-----  226 (279)
T ss_dssp             SSC-------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT-----
T ss_pred             Ccc-------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcc-----
Confidence            211       111122346778999999988889999999999999999999 99999753211  111111110     


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                         ...           .....++..+.+++.+||+.||++|||+.+|++.|+.+.....+
T Consensus       227 ---~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  273 (279)
T 1qpc_A          227 ---YRM-----------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG  273 (279)
T ss_dssp             ---CCC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred             ---cCC-----------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence               000           01123456789999999999999999999999999998876554


No 145
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=326.78  Aligned_cols=243  Identities=20%  Similarity=0.282  Sum_probs=200.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--------hhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--------EASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++.....        .....+.+|+.+++.++||||+++++++   
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~---   98 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---   98 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE---
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence            45689999999999999999999999999999999975421        1233567899999999999999999995   


Q ss_pred             cCCCcceeeEEEeecCCC-CHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEE
Q 046639          100 DFEGFDFKAIVFEYMQNR-NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV  178 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl  178 (331)
                        ...+..++|||++.++ +|.+++....  .+++..+..++.|++.||.|||++   +|+|+||||+||+++.++.+||
T Consensus        99 --~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL  171 (335)
T 3dls_A           99 --ENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKL  171 (335)
T ss_dssp             --ECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred             --eeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEE
Confidence              4556789999998666 9999997643  477889999999999999999999   9999999999999999999999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHH
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHE  257 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  257 (331)
                      +|||++.....         ........||+.|+|||++.+..+ +.++||||||+++|+|++|..||......      
T Consensus       172 ~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------  236 (335)
T 3dls_A          172 IDFGSAAYLER---------GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------  236 (335)
T ss_dssp             CCCTTCEECCT---------TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------
T ss_pred             eecccceECCC---------CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------
Confidence            99999986521         122334568999999999988876 88999999999999999999999642110      


Q ss_pred             HHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          258 FVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                   .....         ..+..++..+.+|+.+||+.||++|||+.++++
T Consensus       237 -------------~~~~~---------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          237 -------------VEAAI---------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             -------------TTTCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------Hhhcc---------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                         00000         000113567899999999999999999999986


No 146
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=3e-45  Score=317.74  Aligned_cols=252  Identities=22%  Similarity=0.285  Sum_probs=196.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|.+..++..+|+|++.... ......+.+|+.+++.++||||+++++++     ......
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~   95 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHNM   95 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCeE
Confidence            357999999999999999999999999999999987543 22346788999999999999999999995     445678


Q ss_pred             eEEEeecCCCCHHHHHHhc--cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccC
Q 046639          108 AIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLG  182 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg  182 (331)
                      ++|||++++++|.+++...  .+..+++..++.++.|++.||.+||+.   +++|+||||+||++   +.++.++|+|||
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg  172 (285)
T 3is5_A           96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFG  172 (285)
T ss_dssp             EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred             EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeee
Confidence            9999999999999998653  335578889999999999999999999   99999999999999   456789999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++.....         ........+|+.|+|||++. ..++.++||||||+++|+|++|..||......  .........
T Consensus       173 ~a~~~~~---------~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~  240 (285)
T 3is5_A          173 LAELFKS---------DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYK  240 (285)
T ss_dssp             CCCC-------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC
T ss_pred             cceecCC---------cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccC
Confidence            9976521         12223456899999999986 46899999999999999999999999754211  111111110


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .         +.....        .....+.+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~---------~~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          241 E---------PNYAVE--------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             C---------CCCCC----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             C---------cccccc--------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0         000000        0113457889999999999999999999974


No 147
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=4e-44  Score=318.47  Aligned_cols=280  Identities=20%  Similarity=0.267  Sum_probs=213.8

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHc--CCCCCcceeeceeec
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN--IRHRNLIKIITICSS   98 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~   98 (331)
                      ++.......++|.+.+.||+|+||+||+|.+  +++.||+|++...   ....+..|.+++..  ++||||+++++++..
T Consensus        33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~  107 (342)
T 1b6c_B           33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK  107 (342)
T ss_dssp             CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred             ceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence            3444455667899999999999999999998  4889999998643   23456788888887  689999999999754


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeecCCCCCCEEe
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH--------HHCQPSIVHGDLKPSNILL  170 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH--------~~~~~~ivH~dik~~nilv  170 (331)
                      .. ......++|||++++++|.+++...   .+++..++.++.|++.||.+||        +.   +++|+||||+||++
T Consensus       108 ~~-~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          108 DN-GTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV  180 (342)
T ss_dssp             CC-SSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred             cC-CccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence            21 1123689999999999999999764   3778899999999999999999        77   99999999999999


Q ss_pred             cCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC------CCccchhhHhHHHHHHHHHhC---
Q 046639          171 DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR---  241 (331)
Q Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g---  241 (331)
                      +.++.+||+|||++.........    .........||+.|+|||++.+.      .++.++||||||+++|+|++|   
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~  256 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI  256 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTE----EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred             CCCCCEEEEECCCceeccccccc----cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCc
Confidence            99999999999999875322110    00122344689999999998875      344789999999999999999   


Q ss_pred             -------CCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHH
Q 046639          242 -------RRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRD  314 (331)
Q Consensus       242 -------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~  314 (331)
                             ..||.....................    ..+.....      ....++...+.+|+.+||+.||++|||+.+
T Consensus       257 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~  326 (342)
T 1b6c_B          257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPNR------WQSCEALRVMAKIMRECWYANGAARLTALR  326 (342)
T ss_dssp             TTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGG------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CCcccccccCccccCcCcccHHHHHHHHHHHH----hCCCCccc------ccchhHHHHHHHHHHHHhccChhhCCCHHH
Confidence                   7788765444433433333221111    11111110      112367889999999999999999999999


Q ss_pred             HHHHHHHhhhhh
Q 046639          315 VVAKLRHARETF  326 (331)
Q Consensus       315 i~~~L~~~~~~~  326 (331)
                      |++.|+.+.+..
T Consensus       327 i~~~L~~i~~~~  338 (342)
T 1b6c_B          327 IKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh
Confidence            999999988753


No 148
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-44  Score=320.87  Aligned_cols=263  Identities=24%  Similarity=0.352  Sum_probs=201.3

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCC----ceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESR----SIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ++|.+.+.||+|+||+||+|.+..++    ..||+|++.... ......+.+|+.+++.++||||+++++++     ...
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~  118 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SKY  118 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSS
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ecC
Confidence            46778899999999999999986543    469999986543 33456789999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++.... ..+++..++.++.|++.||.+||++   +++|+||||+||+++.++.+||+|||++
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  194 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS  194 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             CCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence            67899999999999999997643 3477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ........     .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||.....  ......+... 
T Consensus       195 ~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~~~-  266 (333)
T 1mqb_A          195 RVLEDDPE-----ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAINDG-  266 (333)
T ss_dssp             ---------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTT-
T ss_pred             hhhccccc-----cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHCC-
Confidence            87522111     1111222345778999999998899999999999999999999 9999965321  1111111110 


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                             ...           .....++..+.+++.+||+.||.+|||+.+|++.|+.+.+...
T Consensus       267 -------~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          267 -------FRL-----------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             -------CCC-----------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             -------CcC-----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence                   000           0112345678999999999999999999999999999877654


No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.6e-45  Score=324.29  Aligned_cols=271  Identities=24%  Similarity=0.327  Sum_probs=210.9

Q ss_pred             hhhhccCCcccHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceE--EEEEeecc-chhhHHHHHHHHHHHHcC-CC
Q 046639           11 LSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIV--AVKVVNLK-QKEASRSFAAECNALRNI-RH   86 (331)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~e~~~l~~l-~h   86 (331)
                      .+....||.+++.       +|.+.+.||+|+||.||+|++..++..+  |+|.+... .....+.+.+|+.+++++ +|
T Consensus        13 ~~~~~~~p~~~~~-------~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h   85 (327)
T 1fvr_A           13 NPDPTIYPVLDWN-------DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH   85 (327)
T ss_dssp             ---CCCSSBCCGG-------GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC
T ss_pred             CCCCcccccccHH-------HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC
Confidence            4556677877775       6999999999999999999998888755  89988643 233446688999999999 89


Q ss_pred             CCcceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhcc--------------CCccchHHHHHHHHHHHHHHHHHhh
Q 046639           87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSN--------------GQLRFLTQRVNIAIDVSFAIEYFHH  152 (331)
Q Consensus        87 ~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~~~~i~~~l~~LH~  152 (331)
                      |||+++++++     ...+..++|||++++++|.+++....              ...+++..++.++.|++.||.+||+
T Consensus        86 p~iv~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  160 (327)
T 1fvr_A           86 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ  160 (327)
T ss_dssp             TTBCCEEEEE-----EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cchhhhceee-----eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999995     34567899999999999999997643              2457888999999999999999999


Q ss_pred             cCCCCeeecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHH
Q 046639          153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFG  232 (331)
Q Consensus       153 ~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  232 (331)
                      +   +++|+||||+||+++.++.+||+|||++....         .........+++.|+|||++.+..++.++||||||
T Consensus       161 ~---~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~---------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  228 (327)
T 1fvr_A          161 K---QFIHRDLAARNILVGENYVAKIADFGLSRGQE---------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG  228 (327)
T ss_dssp             T---TEECSCCSGGGEEECGGGCEEECCTTCEESSC---------EECCC----CCTTTCCHHHHHHCEECHHHHHHHHH
T ss_pred             C---CccCCCCccceEEEcCCCeEEEcccCcCcccc---------ccccccCCCCCccccChhhhccccCCchhcchHHH
Confidence            9   99999999999999999999999999987431         11122233467789999999888899999999999


Q ss_pred             HHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCc
Q 046639          233 ILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERME  311 (331)
Q Consensus       233 ~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps  311 (331)
                      +++|+|++ |..||.....     .........     ....           .....++..+.+|+.+||+.||.+|||
T Consensus       229 ~il~ellt~g~~pf~~~~~-----~~~~~~~~~-----~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps  287 (327)
T 1fvr_A          229 VLLWEIVSLGGTPYCGMTC-----AELYEKLPQ-----GYRL-----------EKPLNCDDEVYDLMRQCWREKPYERPS  287 (327)
T ss_dssp             HHHHHHHTTSCCTTTTCCH-----HHHHHHGGG-----TCCC-----------CCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHcCCCCCCCCCcH-----HHHHHHhhc-----CCCC-----------CCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            99999998 9999975421     111111100     0000           111234567899999999999999999


Q ss_pred             HHHHHHHHHHhhhhh
Q 046639          312 MRDVVAKLRHARETF  326 (331)
Q Consensus       312 ~~~i~~~L~~~~~~~  326 (331)
                      +.++++.|+.+.+..
T Consensus       288 ~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          288 FAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999887754


No 150
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=7e-45  Score=314.67  Aligned_cols=261  Identities=18%  Similarity=0.282  Sum_probs=205.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecC---CCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDE---SRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+.+.||+|+||+||+|.+..   ++..||+|.+... .....+.+.+|+.+++.++||||+++++++..     
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----   84 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-----   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence            34679999999999999999998653   4456999998754 33455778999999999999999999998532     


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                       +..++|||++++++|.+++.... ..++...+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||+
T Consensus        85 -~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~  159 (281)
T 3cc6_A           85 -EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL  159 (281)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred             -CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence             34689999999999999997643 3467788999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +......       .........+++.|+|||++.+..++.++||||||+++|+|++ |..||......  .........
T Consensus       160 ~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~  230 (281)
T 3cc6_A          160 SRYIEDE-------DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKG  230 (281)
T ss_dssp             GGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHT
T ss_pred             Ccccccc-------cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcC
Confidence            9865221       1111223446778999999988899999999999999999998 99999754322  122221111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...                   .....++..+.+++.+||+.||++|||+.++++.|+.+.+.-
T Consensus       231 ~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          231 DRL-------------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             CCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCC-------------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence            100                   001124567899999999999999999999999999987653


No 151
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.5e-45  Score=322.68  Aligned_cols=260  Identities=18%  Similarity=0.295  Sum_probs=200.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceE----EEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIV----AVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.+    |+|.+... .......+.+|+.+++.++||||+++++++..     
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence            458999999999999999999998777655    66665432 33445778999999999999999999999753     


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                       ...++++|++.+++|.+++..... .++...++.++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||+
T Consensus        89 -~~~~~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~  163 (327)
T 3lzb_A           89 -STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             -SSEEEEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred             -CCceEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence             236899999999999999986433 467888999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +.......      .........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  .........
T Consensus       164 a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~  235 (327)
T 3lzb_A          164 AKLLGAEE------KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG  235 (327)
T ss_dssp             ----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTT
T ss_pred             eeEccCcc------ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcC
Confidence            98752211      1112223446778999999999999999999999999999999 99999764322  222222111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      ...                   .....++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       236 ~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          236 ERL-------------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             CCC-------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             CCC-------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            100                   01122455788999999999999999999999999998754


No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=6.2e-45  Score=319.60  Aligned_cols=245  Identities=20%  Similarity=0.193  Sum_probs=192.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ++|.+.++||+|+||+||+|++..+++.||||++...  ..........|+..+..+ .||||++++++|.     ..+.
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~  131 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI  131 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence            5799999999999999999999999999999988543  233334455566655555 8999999999953     4577


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++ +++|.+++.... ..+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++..
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          132 LYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             EEEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             EEEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeee
Confidence            89999999 789999987653 3578899999999999999999999   999999999999999999999999999876


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...         ........||+.|+|||++.+ .++.++||||||+++|+|++|..|+...    ..........    
T Consensus       207 ~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~----  268 (311)
T 3p1a_A          207 LGT---------AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGY----  268 (311)
T ss_dssp             CC---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTC----
T ss_pred             ccc---------CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccC----
Confidence            521         112223458999999999876 7899999999999999999997665431    1111110000    


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                              ..       ..+...++..+.+++.+||+.||++|||+.++++
T Consensus       269 --------~~-------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          269 --------LP-------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             --------CC-------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --------CC-------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                    00       0222345678999999999999999999999985


No 153
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.9e-45  Score=338.77  Aligned_cols=260  Identities=25%  Similarity=0.408  Sum_probs=204.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+.. +..||||+++... ...+.+.+|+.+++.++||||+++++++..      +..
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~  253 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI  253 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence            45679999999999999999999974 4569999997443 234678999999999999999999998632      457


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++....+..+++..+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||+++..
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  330 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceec
Confidence            9999999999999999765445577889999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...       .........++..|+|||++.+..++.++||||||+++|||++ |..||......  .....+....   
T Consensus       331 ~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~---  398 (452)
T 1fmk_A          331 EDN-------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGY---  398 (452)
T ss_dssp             -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC---
T ss_pred             CCC-------ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---
Confidence            211       1111223346778999999998899999999999999999999 99999764221  1111111110   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                           .    .       ..+..++..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus       399 -----~----~-------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          399 -----R----M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             -----C----C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             -----C----C-------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence                 0    0       111245678999999999999999999999999999886554


No 154
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.1e-45  Score=320.68  Aligned_cols=270  Identities=20%  Similarity=0.274  Sum_probs=198.2

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+++.||+|+||+||+|.+..+++.||+|++....  ....+.+.+|+.+++.++||||+++++++.     ..+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCe
Confidence            368999999999999999999999999999999885443  333466889999999999999999999954     4567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++....  .++...+..++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++..
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  151 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARL  151 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence            899999999999998886543  477889999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh---
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA---  262 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~---  262 (331)
                      ....        ........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||........ ........   
T Consensus       152 ~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~  222 (311)
T 4agu_A          152 LTGP--------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDL  222 (311)
T ss_dssp             CC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSC
T ss_pred             ccCc--------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhccc
Confidence            5211        112234468899999999876 5689999999999999999999999976432211 11111110   


Q ss_pred             CcchhhhhcCccccccc--c--cC---CcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEV--T--AN---NYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .+...............  .  ..   ......+++..+.+|+.+||+.||.+|||+.++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            00000000000000000  0  00   00011235667899999999999999999999974


No 155
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.6e-46  Score=328.31  Aligned_cols=272  Identities=20%  Similarity=0.279  Sum_probs=189.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHc--CCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN--IRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+.  ++.||+|++....   ...+..|.+++..  ++||||+++++++.... .....
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~   75 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ   75 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEc--CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence            468999999999999999999875  7889999986432   3456678888887  68999999999975432 22236


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeecCCCCCCEEecCCCcEEE
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH--------HHCQPSIVHGDLKPSNILLDQDIVAHV  178 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH--------~~~~~~ivH~dik~~nilv~~~~~~kl  178 (331)
                      .++|||++++++|.++++..   .+++..++.++.|++.||.|||        +.   +++|+||||+||+++.++.+||
T Consensus        76 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl  149 (303)
T 3gxj_A           76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             EEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred             eEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence            89999999999999999754   3667888999999999999999        87   9999999999999999999999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCC------CCccchhhHhHHHHHHHHHhC----------C
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR----------R  242 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~~~~~DiwslG~il~el~~g----------~  242 (331)
                      +|||++........    ..........||+.|+|||++.+.      .++.++||||||+++|+|++|          .
T Consensus       150 ~DFg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~  225 (303)
T 3gxj_A          150 ADLGLAVRHDSATD----TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  225 (303)
T ss_dssp             CCCCC-CCEETTTT----EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCC
T ss_pred             eecCcceeccCCCc----ccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceee
Confidence            99999976532211    111122334689999999998876      455789999999999999999          6


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHh
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHA  322 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~  322 (331)
                      .||.................        ............  ....++...+.+|+.+||+.||.+|||+.+|++.|+.+
T Consensus       226 ~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l  295 (303)
T 3gxj_A          226 LPYYDLVPSDPSVEEMRKVV--------CEQKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CTTTTTCC-CCCCC-CHHHH--------TTSCCCCCCCGG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-
T ss_pred             ccccccCCCCccHHHHHHHH--------HHhhcCCCcccc--ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHh
Confidence            66654322221111111111        111111111110  11136788999999999999999999999999999988


Q ss_pred             hhhh
Q 046639          323 RETF  326 (331)
Q Consensus       323 ~~~~  326 (331)
                      .+..
T Consensus       296 ~~~~  299 (303)
T 3gxj_A          296 SQQE  299 (303)
T ss_dssp             CCC-
T ss_pred             hhhc
Confidence            7654


No 156
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.7e-45  Score=323.79  Aligned_cols=252  Identities=19%  Similarity=0.230  Sum_probs=180.5

Q ss_pred             CCCc---CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCCcce
Q 046639           31 NFSP---ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        31 ~y~~---~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      +|.+   .+.||+|+||+||+|.+..+++.||+|++...   ......+|+.+++.+. ||||+++++++     .+...
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~~   80 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQLH   80 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCCE
Confidence            4554   37899999999999999999999999999643   3356778999999997 99999999995     45567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC---cEEEcccCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI---VAHVGDLGL  183 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~---~~kl~Dfg~  183 (331)
                      .++|||++++++|.+++...  ..+++..+..++.|++.||.|||++   +|+|+||||+||+++.++   .+||+|||+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~  155 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGF  155 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTT
T ss_pred             EEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccc
Confidence            89999999999999999764  3478899999999999999999999   999999999999998766   899999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCc--chHHHHHHh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEG--LTLHEFVKM  261 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~  261 (331)
                      +.....        .........+|+.|+|||++.+..++.++||||||+++|+|++|..||.......  .........
T Consensus       156 a~~~~~--------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  227 (325)
T 3kn6_A          156 ARLKPP--------DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK  227 (325)
T ss_dssp             CEECCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH
T ss_pred             ceecCC--------CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH
Confidence            976421        1122234457899999999999999999999999999999999999997643211  111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                      .....        .     .........++..+.+|+.+||+.||.+|||+.+++
T Consensus       228 i~~~~--------~-----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          228 IKKGD--------F-----SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HTTTC--------C-----CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             HHcCC--------C-----CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            11100        0     000112234567899999999999999999999886


No 157
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=6.5e-45  Score=333.37  Aligned_cols=212  Identities=22%  Similarity=0.298  Sum_probs=171.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||||++...  .......+.+|+.+++.++||||+++++++..........
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            35899999999999999999999999999999999643  3344567899999999999999999999976554445577


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++ +++|.+++...  ..+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++.
T Consensus       105 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          105 LYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             EEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            89999999 57999999653  3478899999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCc--------------ccccCCceeecccccccCCccc-CCCCCccchhhHhHHHHHHHHHhCCCCCC
Q 046639          187 LFGYEPGTA--------------AETASNSIEIKGIVGYVAPEYG-MGSKASVSGDVYNFGILLLEMFTRRRPTD  246 (331)
Q Consensus       187 ~~~~~~~~~--------------~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~  246 (331)
                      .........              ...........||+.|+|||++ .+..++.++|||||||++|||++|..||.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            632211100              0001123456789999999985 55679999999999999999998655543


No 158
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-45  Score=335.15  Aligned_cols=263  Identities=21%  Similarity=0.207  Sum_probs=204.7

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceee
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICS   97 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   97 (331)
                      .++++....++|.+++.||+|+||+||+|++..+++.||+|++....   ......+.+|..++..++||||+++++++ 
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-  130 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF-  130 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE-
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-
Confidence            34555666789999999999999999999999999999999996432   22234578899999999999999999985 


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEE
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH  177 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~k  177 (331)
                          .+.+.+++||||+++++|.+++.+.. ..+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+|
T Consensus       131 ----~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vk  202 (412)
T 2vd5_A          131 ----QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIR  202 (412)
T ss_dssp             ----ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred             ----eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEE
Confidence                44578999999999999999997643 3477888999999999999999999   999999999999999999999


Q ss_pred             EcccCcccccccCCCCCcccccCCceeecccccccCCcccC-------CCCCccchhhHhHHHHHHHHHhCCCCCCcccC
Q 046639          178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM-------GSKASVSGDVYNFGILLLEMFTRRRPTDAMFN  250 (331)
Q Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  250 (331)
                      |+|||++.......       ........||+.|+|||++.       +..++.++||||||+++|||++|..||.....
T Consensus       203 L~DFGla~~~~~~~-------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  275 (412)
T 2vd5_A          203 LADFGSCLKLRADG-------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST  275 (412)
T ss_dssp             ECCCTTCEECCTTS-------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             EeechhheeccCCC-------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH
Confidence            99999998652111       11122356999999999987       45689999999999999999999999975321


Q ss_pred             CcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCC---CcHHHHHH
Q 046639          251 EGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMER---MEMRDVVA  317 (331)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---ps~~~i~~  317 (331)
                       ...+..+.....     ....+           .....++..+.+|+.+||+ +|.+|   |++.+|++
T Consensus       276 -~~~~~~i~~~~~-----~~~~p-----------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          276 -AETYGKIVHYKE-----HLSLP-----------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             -HHHHHHHHTHHH-----HCCCC---------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             -HHHHHHHHhccc-----CcCCC-----------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence             111122211000     00001           0112345678999999999 99998   58888863


No 159
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=7.5e-45  Score=319.71  Aligned_cols=270  Identities=18%  Similarity=0.187  Sum_probs=198.0

Q ss_pred             hcCCCcC-ceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPA-NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+. +.||+|+||+||+|.+..+++.||+|++..........+.+|+.++.++ +||||+++++++.     ..+.
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-----~~~~   85 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-----EEDR   85 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-----eCCE
Confidence            4578885 7899999999999999999999999999766555567789999999985 7999999999954     4567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc---EEEcccCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV---AHVGDLGL  183 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~---~kl~Dfg~  183 (331)
                      .++|||++++++|.+++....  .+++..+..++.|++.||.|||++   +++|+||||+||+++.++.   +||+|||+
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A           86 FYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred             EEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence            899999999999999997653  467888999999999999999999   9999999999999988775   99999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCC-----CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-----SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      +.......... ...........||+.|+|||++.+     ..++.++||||||+++|+|++|..||.........+...
T Consensus       161 ~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  239 (316)
T 2ac3_A          161 GSGIKLNGDCS-PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG  239 (316)
T ss_dssp             CC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC---
T ss_pred             ccccccCCccc-cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc
Confidence            87652211100 011112233458999999999865     457899999999999999999999997653322111000


Q ss_pred             H-----HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 V-----KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .     .......+... .....       ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~i~~~-~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          240 EACPACQNMLFESIQEG-KYEFP-------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             -CCHHHHHHHHHHHHHC-CCCCC-------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccchhHHHHHHHHHhcc-CcccC-------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            0     00000000000 00000       0011234567899999999999999999999986


No 160
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-45  Score=314.95  Aligned_cols=264  Identities=20%  Similarity=0.305  Sum_probs=209.5

Q ss_pred             hcCCCcCc-eeeccCeeEEEEeeec--CCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           29 TNNFSPAN-KIGQGGVSIVYKGILD--ESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+.+ .||+|+||+||+|.+.  .++..||+|++... .....+.+.+|+.+++.++||||+++++++.      .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence            45677777 9999999999999864  46788999999754 3345577899999999999999999999862      2


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++... ...+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~  157 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLS  157 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTC
T ss_pred             CCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccce
Confidence            4579999999999999999653 33477899999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      .......     ..........+|+.|+|||++.+..++.++||||||+++|+|++ |..||.....  ......+....
T Consensus       158 ~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~~~  230 (287)
T 1u59_A          158 KALGADD-----SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGK  230 (287)
T ss_dssp             EECTTCS-----CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHTTC
T ss_pred             eeeccCc-----ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhcCC
Confidence            8752211     11111223346788999999988889999999999999999998 9999976422  11111111110


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                              .+           .....++..+.+++.+||+.||.+|||+.++++.|+.+..+..+
T Consensus       231 --------~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          231 --------RM-----------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             --------CC-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             --------cC-----------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence                    00           11124567899999999999999999999999999999887654


No 161
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.3e-44  Score=321.78  Aligned_cols=271  Identities=18%  Similarity=0.185  Sum_probs=198.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeeccc-CCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSID-FEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++.... .....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46899999999999999999999999999999998643  3444567889999999999999999999975432 23344


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||+++ ++|.+.+..    .++...+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|||++.
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            7899999995 689888853    367788899999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc-
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP-  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-  264 (331)
                      ...         .........||+.|+|||++.+..++.++||||||+++|+|++|..||.+.... ..+......... 
T Consensus       176 ~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~  245 (371)
T 2xrw_A          176 TAG---------TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTP  245 (371)
T ss_dssp             -----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CCCC
T ss_pred             ccc---------cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence            641         111223456899999999999999999999999999999999999999764211 111111111000 


Q ss_pred             -chhhhhcC----------ccc---------ccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 -DKVMEIVD----------PSL---------LLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 -~~~~~~~~----------~~~---------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                       ........          +..         .....+............+.+|+.+||+.||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence             00000000          000         000011112233455788999999999999999999999986


No 162
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=4.8e-45  Score=319.27  Aligned_cols=252  Identities=19%  Similarity=0.252  Sum_probs=201.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++     ......
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   81 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHY   81 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEE
Confidence            456899999999999999999999999999999999765544556788999999999999999999985     445678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccCcc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLA  184 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg~a  184 (331)
                      ++|||++++++|.+++....  .++...+..++.|++.||.+||+.   +++|+||||+||++   +.++.++|+|||++
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~  156 (304)
T 2jam_A           82 YLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS  156 (304)
T ss_dssp             EEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred             EEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence            99999999999999997644  367888999999999999999999   99999999999999   77889999999998


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....          ........+|+.|+|||++.+..++.++||||||+++|+|++|..||...... ............
T Consensus       157 ~~~~----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~  225 (304)
T 2jam_A          157 KMEQ----------NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYE  225 (304)
T ss_dssp             CCCC----------CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCCC
T ss_pred             eecC----------CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC
Confidence            6531          11223345899999999999999999999999999999999999999753211 111111111100


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            ..           ......++..+.+++.+||+.||.+|||+.++++
T Consensus       226 ------~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          226 ------FE-----------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             ------CC-----------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ------CC-----------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                  00           0112234567899999999999999999999985


No 163
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=318.85  Aligned_cols=276  Identities=17%  Similarity=0.186  Sum_probs=198.1

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeeccc-
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSID-  100 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~-  100 (331)
                      ..+.....+|.+.+.||+|+||+||+|.+..+++.||+|++..........+.+|+.+++.+. ||||+++++++.... 
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             ceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            344455668999999999999999999999999999999987666666778899999999996 999999999874221 


Q ss_pred             --CCCcceeeEEEeecCCCCHHHHHHh-ccCCccchHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCEEecCCCc
Q 046639          101 --FEGFDFKAIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS--IVHGDLKPSNILLDQDIV  175 (331)
Q Consensus       101 --~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~--ivH~dik~~nilv~~~~~  175 (331)
                        .......+++||++ +++|.+++.. .....+++..++.++.|++.||.|||+.   +  ++|+||||+||+++.++.
T Consensus       101 ~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             TSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSC
T ss_pred             ccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCC
Confidence              24456689999999 5799999876 2334578899999999999999999999   8  999999999999999999


Q ss_pred             EEEcccCcccccccCCCCCc----ccccCCceeecccccccCCccc---CCCCCccchhhHhHHHHHHHHHhCCCCCCcc
Q 046639          176 AHVGDLGLAKFLFGYEPGTA----AETASNSIEIKGIVGYVAPEYG---MGSKASVSGDVYNFGILLLEMFTRRRPTDAM  248 (331)
Q Consensus       176 ~kl~Dfg~a~~~~~~~~~~~----~~~~~~~~~~~~t~~y~aPE~~---~~~~~~~~~DiwslG~il~el~~g~~pf~~~  248 (331)
                      +||+|||++...........    ...........+|+.|+|||++   .+..++.++||||||+++|+|++|..||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            99999999987632211100    0001112244588999999998   5667899999999999999999999999653


Q ss_pred             cCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          249 FNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...     .........            .       ....+...+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus       257 ~~~-----~~~~~~~~~------------~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          257 AKL-----RIVNGKYSI------------P-------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             --------------CCC------------C-------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hHH-----HhhcCcccC------------C-------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            211     111110000            0       00112234778999999999999999999999999987754


No 164
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.4e-45  Score=325.75  Aligned_cols=270  Identities=17%  Similarity=0.235  Sum_probs=199.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeeccc-CCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSID-FEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++.... .....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            56899999999999999999999999999999998533  3344567889999999999999999999975432 22235


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++ +++|.+++...   .++...+..++.|++.||.|||+.   ||+||||||+||+++.++.+||+|||+++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            579999999 89999999763   367888999999999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC-
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL-  263 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-  263 (331)
                      ....           ......+|+.|+|||++.+ ..++.++||||+||++|+|++|..||.+... ...+........ 
T Consensus       177 ~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~  244 (367)
T 1cm8_A          177 QADS-----------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGT  244 (367)
T ss_dssp             ECCS-----------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCC
T ss_pred             cccc-----------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCC
Confidence            6421           1223468999999999877 6789999999999999999999999975422 112222222111 


Q ss_pred             -cchhhhhcCcc--------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 -PDKVMEIVDPS--------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 -~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                       +......+...        +..............+...+.+|+.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence             11111101000        0000000111222345678999999999999999999999986


No 165
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.4e-45  Score=325.14  Aligned_cols=267  Identities=19%  Similarity=0.352  Sum_probs=210.1

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeec-----CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeecee
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILD-----ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITIC   96 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   96 (331)
                      .+.....++|.+.+.||+|+||+||+|.+.     .+++.||+|.+.... ......+.+|+.+++.++||||+++++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344566788999999999999999999876     357889999986443 33446688999999999999999999995


Q ss_pred             ecccCCCcceeeEEEeecCCCCHHHHHHhcc--------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCE
Q 046639           97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSN--------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI  168 (331)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~ni  168 (331)
                           ......++|||++++++|.+++....        ...+++..++.++.|++.||.+||++   +++|+||||+||
T Consensus        98 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI  169 (322)
T 1p4o_A           98 -----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC  169 (322)
T ss_dssp             -----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred             -----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence                 44567899999999999999997632        13457788999999999999999999   999999999999


Q ss_pred             EecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCc
Q 046639          169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDA  247 (331)
Q Consensus       169 lv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~  247 (331)
                      +++.++.+||+|||++......      ..........+|+.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  243 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYET------DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG  243 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGG------GCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             EEcCCCeEEECcCccccccccc------cccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence            9999999999999999765211      11111223346788999999998899999999999999999999 8999975


Q ss_pred             ccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          248 MFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      ...  ..........   ..     .           .....++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       244 ~~~--~~~~~~~~~~---~~-----~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          244 LSN--EQVLRFVMEG---GL-----L-----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             SCH--HHHHHHHHTT---CC-----C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCH--HHHHHHHHcC---Cc-----C-----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            321  1111111100   00     0           1112355678999999999999999999999999988754


No 166
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=8e-45  Score=332.25  Aligned_cols=200  Identities=24%  Similarity=0.289  Sum_probs=172.9

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC------CCCCcceeeceeecccC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI------RHRNLIKIITICSSIDF  101 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~  101 (331)
                      ...+|.+++.||+|+||+||+|.+..+++.||||++... ......+..|+.+++.+      +|+||+.+++++.    
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~----  169 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT----  169 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE----
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc----
Confidence            345799999999999999999999999999999999643 33445677888888776      5779999999853    


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc--EEEc
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV--AHVG  179 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~--~kl~  179 (331)
                       .....++|||++ +++|.+++.......+++..+..++.|++.||+|||+.   +|+||||||+||+++.++.  +||+
T Consensus       170 -~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~  244 (429)
T 3kvw_A          170 -FRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVI  244 (429)
T ss_dssp             -ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEEC
T ss_pred             -cCCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEe
Confidence             356789999999 57999999887666688899999999999999999999   9999999999999999887  9999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcc
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAM  248 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  248 (331)
                      |||++....           .......+|+.|+|||++.+..++.++|||||||++|+|++|.+||...
T Consensus       245 DFG~a~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          245 DFGSSCYEH-----------QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCTTCEETT-----------CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ecccceecC-----------CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            999997541           1222356899999999999999999999999999999999999999764


No 167
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=2.3e-45  Score=324.61  Aligned_cols=261  Identities=18%  Similarity=0.231  Sum_probs=205.9

Q ss_pred             HHHHHHHhcCCCcC-ceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCC-CCCcceeeceee
Q 046639           22 YAELSKATNNFSPA-NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIR-HRNLIKIITICS   97 (331)
Q Consensus        22 ~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~   97 (331)
                      +.......++|.+. +.||+|+||+||+|.+..+++.||+|++....  ......+.+|+.+++.+. ||||+++++++ 
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~-   98 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY-   98 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE-
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE-
Confidence            34555667778888 89999999999999999999999999986543  233567889999999995 69999999995 


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CC
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DI  174 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~  174 (331)
                          ......++|||++++++|.+++.......+++..++.++.|++.||.+||+.   +++|+||||+||+++.   ++
T Consensus        99 ----~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~  171 (327)
T 3lm5_A           99 ----ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG  171 (327)
T ss_dssp             ----ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred             ----EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence                4456789999999999999998765556688899999999999999999999   9999999999999987   78


Q ss_pred             cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      .+||+|||++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||....... .
T Consensus       172 ~~kL~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~  241 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGH---------ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-T  241 (327)
T ss_dssp             CEEECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred             cEEEeeCccccccCC---------ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-H
Confidence            999999999987521         112234568999999999999999999999999999999999999997532111 1


Q ss_pred             HHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          255 LHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...........      .           ......+...+.+++.+||+.||.+|||+.++++
T Consensus       242 ~~~i~~~~~~~------~-----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          242 YLNISQVNVDY------S-----------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHTCCCC------C-----------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHhccccc------C-----------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            11111111000      0           0111235567889999999999999999999974


No 168
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=9.5e-45  Score=316.52  Aligned_cols=271  Identities=21%  Similarity=0.273  Sum_probs=202.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--hhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--EASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.....  .....+.+|+.+++.++||||+++++++.     ..+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENK   76 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-----cCCc
Confidence            3589999999999999999999999999999999864432  22366889999999999999999999954     3567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++. ++|.+++.......+++..+..++.|++.||.+||++   |++|+||||+||+++.++.++|+|||++..
T Consensus        77 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  152 (299)
T 2r3i_A           77 LYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA  152 (299)
T ss_dssp             EEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred             eEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence            899999995 6999999876656678889999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCC-CccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....        ........+|+.|+|||++.+.. ++.++||||||+++|+|++|..||...... .............
T Consensus       153 ~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~  223 (299)
T 2r3i_A          153 FGVP--------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTP  223 (299)
T ss_dssp             HCCC--------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred             ccCC--------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCC
Confidence            5211        11122345788999999988765 799999999999999999999999764221 1122222211110


Q ss_pred             hhhhhcC----ccccccccc----CCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVD----PSLLLEVTA----NNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .......    +.....+..    ........++..+.+|+.+||+.||++|||+.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             CTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0000000    000000000    000111234567899999999999999999999986


No 169
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=6e-45  Score=324.28  Aligned_cols=246  Identities=22%  Similarity=0.280  Sum_probs=197.6

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ++|.+.+.||+|+||+||+|++..+++.||+|++...   .......+.+|+.+++.++||||+++++++.     ..+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~  128 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT  128 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCe
Confidence            4599999999999999999999989999999999643   2334467889999999999999999999964     3467


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++. |+|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++..
T Consensus       129 ~~lv~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~  203 (348)
T 1u5q_A          129 AWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI  203 (348)
T ss_dssp             EEEEEECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred             EEEEEecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCcee
Confidence            899999995 78988886533 3477888999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccC---CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGM---GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ..            ......||+.|+|||++.   +..++.++||||||+++|+|++|..||....... ......... 
T Consensus       204 ~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~-  269 (348)
T 1u5q_A          204 MA------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE-  269 (348)
T ss_dssp             SS------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC-
T ss_pred             cC------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcC-
Confidence            41            112346899999999974   5678999999999999999999999996532111 111111111 


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                              .+...          ...++..+.+|+.+||+.||.+|||+.++++
T Consensus       270 --------~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          270 --------SPALQ----------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             --------CCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------CCCCC----------CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                    11110          0123457889999999999999999999875


No 170
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.2e-44  Score=337.62  Aligned_cols=250  Identities=21%  Similarity=0.285  Sum_probs=201.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++....   ......+..|+.+++.++||||+++++++     ....
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETKT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeCC
Confidence            367999999999999999999999999999999996442   22346688999999999999999999984     4457


Q ss_pred             eeeEEEeecCCCCHHHHHHhcc--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+++||||+++++|.+++....  ...+++..+..++.|++.||.|||++   +|+||||||+||+++.+|.+||+|||+
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGl  335 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGL  335 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecce
Confidence            7899999999999999997643  44578889999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +..+...        ........||+.|+|||++.+..++.++|||||||++|||++|..||....... ..........
T Consensus       336 a~~~~~~--------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~  406 (543)
T 3c4z_A          336 AVELKAG--------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVL  406 (543)
T ss_dssp             CEECCTT--------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHH
T ss_pred             eeeccCC--------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHh
Confidence            9875211        111233579999999999999999999999999999999999999997642211 1111111110


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM  312 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~  312 (331)
                      ..                 ...++..++..+.+|+.+||+.||.+||++
T Consensus       407 ~~-----------------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          407 EQ-----------------AVTYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HC-----------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             hc-----------------ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            00                 001122345678899999999999999965


No 171
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=4.4e-45  Score=323.06  Aligned_cols=275  Identities=19%  Similarity=0.241  Sum_probs=195.3

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--hhHHHHHHHHHHHHcCCCCCcceeeceeeccc
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--EASRSFAAECNALRNIRHRNLIKIITICSSID  100 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  100 (331)
                      .......++|.+.+.||+|+||+||+|++..+++.||+|++.....  .....+.+|+.+++.++||||+++++++    
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----  102 (329)
T 3gbz_A           27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI----  102 (329)
T ss_dssp             -----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE----
T ss_pred             CCcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE----
Confidence            3445566789999999999999999999999999999999965432  2245677999999999999999999995    


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec-----CCCc
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD-----QDIV  175 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~-----~~~~  175 (331)
                       ......++|||+++ ++|.+++....  .+++..+..++.|++.||.|||++   +|+|+||||+||+++     .++.
T Consensus       103 -~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~  175 (329)
T 3gbz_A          103 -HHNHRLHLIFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPV  175 (329)
T ss_dssp             -EETTEEEEEEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCE
T ss_pred             -ecCCEEEEEEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccce
Confidence             44567899999995 69999997654  377889999999999999999999   999999999999994     4556


Q ss_pred             EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      +||+|||++.....        .........+|+.|+|||++.+. .++.++||||||+++|+|++|..||....... .
T Consensus       176 ~kl~Dfg~a~~~~~--------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~  246 (329)
T 3gbz_A          176 LKIGDFGLARAFGI--------PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-Q  246 (329)
T ss_dssp             EEECCTTHHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred             EEECcCCCccccCC--------cccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-H
Confidence            99999999987521        11222334578999999998875 48999999999999999999999997642221 2


Q ss_pred             HHHHHHhhCcchhhhhc----CcccccccccCCc-----chHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          255 LHEFVKMALPDKVMEIV----DPSLLLEVTANNY-----SWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       255 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .................    .+...........     .....+...+.+|+.+||+.||.+|||+.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          247 LFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            22222111100000000    0000000000000     011124567899999999999999999999975


No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=7.1e-45  Score=316.69  Aligned_cols=250  Identities=18%  Similarity=0.279  Sum_probs=204.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.+|+|++...   .....+.+.+|+.+++.++||||+++++++     ...
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~   87 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN   87 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccC
Confidence            456899999999999999999999999999999998644   234556788999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++....  .+++..+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||++
T Consensus        88 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~  162 (294)
T 2rku_A           88 DFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA  162 (294)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCc
Confidence            67899999999999999987643  467889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ......        ........+|+.|+|||++.+..++.++||||||+++|+|++|..||......     ........
T Consensus       163 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~  229 (294)
T 2rku_A          163 TKVEYD--------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRIKK  229 (294)
T ss_dssp             EECCST--------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHT
T ss_pred             eecccC--------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhh
Confidence            865211        11223356889999999999988999999999999999999999999753211     11110000


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .      ..           .....+...+.+++.+||+.||++|||+.++++
T Consensus       230 ~------~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          230 N------EY-----------SIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             T------CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             c------cC-----------CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            0      00           111223457889999999999999999999986


No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.3e-44  Score=313.29  Aligned_cols=258  Identities=19%  Similarity=0.249  Sum_probs=203.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch------hhHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK------EASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.....      ...+.+.+|+.+++.++||||+++++++     .
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~   78 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----E   78 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----c
Confidence            3579999999999999999999999999999999865422      1356789999999999999999999995     3


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC----cEEE
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI----VAHV  178 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~----~~kl  178 (331)
                      .....++|||++++++|.+++....  .+++..+..++.|++.||.+||+.   +++|+||||+||+++.++    .++|
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl  153 (283)
T 3bhy_A           79 NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL  153 (283)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred             CCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence            4567899999999999999997643  477889999999999999999999   999999999999998877    8999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      +|||++.....         ........+++.|+|||++.+..++.++||||||+++|+|++|..||......  .....
T Consensus       154 ~dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  222 (283)
T 3bhy_A          154 IDFGIAHKIEA---------GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTN  222 (283)
T ss_dssp             CCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH
T ss_pred             EecccceeccC---------CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHH
Confidence            99999986521         11223345889999999999999999999999999999999999999753211  11111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH--HHHHhh
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA--KLRHAR  323 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~--~L~~~~  323 (331)
                      .....         ....       ......++..+.+++.+||+.||.+|||+.++++  +++.+.
T Consensus       223 ~~~~~---------~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          223 ISAVN---------YDFD-------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHTTC---------CCCC-------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             hHhcc---------cCCc-------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            11000         0000       0112234567899999999999999999999987  454443


No 174
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=6.2e-45  Score=314.57  Aligned_cols=257  Identities=19%  Similarity=0.234  Sum_probs=204.8

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++..   .....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence            46899999999999999999999999999999999754  34455678999999999999999999998642   23467


Q ss_pred             eeEEEeecCCCCHHHHHHhcc--CCccchHHHHHHHHHHHHHHHHHhhcCCCC-----eeecCCCCCCEEecCCCcEEEc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHHHCQPS-----IVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~-----ivH~dik~~nilv~~~~~~kl~  179 (331)
                      .++|||++++++|.+++....  ...+++..++.++.|++.||.+||+.   +     ++|+||||+||+++.++.+||+
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~  158 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLG  158 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEEC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence            899999999999999997632  34477889999999999999999999   8     9999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      |||++.....        .........+++.|+|||++.+..++.++||||||+++|+|++|..||.....  ......+
T Consensus       159 dfg~~~~~~~--------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i  228 (279)
T 2w5a_A          159 DFGLARILNH--------DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI  228 (279)
T ss_dssp             CCCHHHHC-----------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred             cCchheeecc--------ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH
Confidence            9999986521        11112234588999999999998999999999999999999999999975421  1111111


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLR  320 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~  320 (331)
                      ....        .+           .....++..+.+++.+||+.||.+|||+.+|++.+.
T Consensus       229 ~~~~--------~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          229 REGK--------FR-----------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHTC--------CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             hhcc--------cc-----------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            1110        00           011234567899999999999999999999987543


No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=7.6e-45  Score=314.93  Aligned_cols=247  Identities=18%  Similarity=0.260  Sum_probs=202.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ...+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCC
Confidence            457999999999999999999999999999999986432   22346788999999999999999999995     3456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++++++|.+++....  .++...+..++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++.
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccc
Confidence            7899999999999999997654  367889999999999999999999   99999999999999999999999999987


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ....          .......+++.|+|||++.+..++.++||||||+++|+|++|..||......  ........    
T Consensus       163 ~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~----  226 (284)
T 2vgo_A          163 HAPS----------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVN----  226 (284)
T ss_dssp             ECSS----------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT----
T ss_pred             cCcc----------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhc----
Confidence            5421          1123356889999999999999999999999999999999999999753211  11110000    


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                           .+.           .++..++..+.+++.+||+.||.+|||+.++++
T Consensus       227 -----~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          227 -----VDL-----------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -----TCC-----------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----ccc-----------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                 000           111224567889999999999999999999986


No 176
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.7e-44  Score=335.60  Aligned_cols=252  Identities=22%  Similarity=0.223  Sum_probs=201.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++....  ......+.+|+.+++.++||||+++++++     ....
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~   94 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSS   94 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCC
Confidence            4567999999999999999999999999999999986432  23346788999999999999999999995     4457


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec---CCCcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~---~~~~~kl~Dfg  182 (331)
                      ..++|||++.+++|.+.+....  .+++..+..++.|++.||.|||++   +|+||||||+||+++   .++.+||+|||
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  169 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG  169 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred             EEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence            7899999999999999987653  477889999999999999999999   999999999999995   45679999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++.....         ........||+.|+|||++.+ .++.++||||||+++|+|++|..||..... ...........
T Consensus       170 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~  238 (486)
T 3mwu_A          170 LSTCFQQ---------NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGK  238 (486)
T ss_dssp             CTTTBCC---------C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTC
T ss_pred             cCeECCC---------CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCC
Confidence            9976521         122234568999999999876 589999999999999999999999975321 11111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....                 ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       239 ~~~~-----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          239 YAFD-----------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CCSC-----------------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCC-----------------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1100                 0111235567899999999999999999999986


No 177
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.6e-45  Score=325.26  Aligned_cols=269  Identities=20%  Similarity=0.270  Sum_probs=195.2

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhh-HHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA-SRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      ++|.+++.||+|+||+||+|.+..+++.||+|++....... ...+.+|+.+++.++||||+++++++     ...+..+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence            57999999999999999999999999999999986543222 12355799999999999999999995     4456789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      +|||+++ ++|.+++.... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++....
T Consensus        77 lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           77 LVFEYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             EEEECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             EEecccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            9999995 69999987643 3577888999999999999999999   99999999999999999999999999997542


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc--
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD--  265 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--  265 (331)
                      .        .........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...... .............  
T Consensus       152 ~--------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~  222 (324)
T 3mtl_A          152 I--------PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFRILGTPTE  222 (324)
T ss_dssp             -------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCT
T ss_pred             C--------CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCh
Confidence            1        1122233457899999999877 56899999999999999999999999764221 1122222111110  


Q ss_pred             -hhhhhcCcccccc------cccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 -KVMEIVDPSLLLE------VTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 -~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                       .+...........      ...........+...+.+|+.+||+.||.+|||+.|+++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          223 ETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             TTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence             0000000000000      000000111234567889999999999999999999986


No 178
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.6e-44  Score=314.47  Aligned_cols=252  Identities=21%  Similarity=0.286  Sum_probs=197.3

Q ss_pred             CCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeEE
Q 046639           31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIV  110 (331)
Q Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~lv  110 (331)
                      +|.....||+|+||+||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++.     ..+..++|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv   97 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-----ENGFIKIF   97 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-----eCCcEEEE
Confidence            4455559999999999999999999999999998766666678999999999999999999999953     34678999


Q ss_pred             EeecCCCCHHHHHHhcc-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC-CCcEEEcccCcccccc
Q 046639          111 FEYMQNRNLEQWLRQSN-GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ-DIVAHVGDLGLAKFLF  188 (331)
Q Consensus       111 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~-~~~~kl~Dfg~a~~~~  188 (331)
                      ||++++++|.+++.... ....+...+..++.|++.||.+||+.   +++|+||||+||+++. ++.++|+|||++....
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            99999999999998753 23455778888999999999999999   9999999999999987 8999999999998652


Q ss_pred             cCCCCCcccccCCceeecccccccCCcccCCCC--CccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ..        ........+++.|+|||++.+..  ++.++||||||+++|+|++|..||.................    
T Consensus       175 ~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----  242 (295)
T 2clq_A          175 GI--------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK----  242 (295)
T ss_dssp             C-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC----
T ss_pred             CC--------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc----
Confidence            11        11123345889999999987654  78999999999999999999999975422211111110000    


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                          ..+           .....++..+.+++.+||+.||++|||+.++++
T Consensus       243 ----~~~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          243 ----VHP-----------EIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             ----CCC-----------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ----ccc-----------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                011           111234567889999999999999999999974


No 179
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.3e-44  Score=312.09  Aligned_cols=249  Identities=22%  Similarity=0.298  Sum_probs=194.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ...
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   83 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STP   83 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecC
Confidence            3468999999999999999999999899999999986442   22346788999999999999999999985     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++....  .++...+..++.|++.||.+||++   +++|+||+|+||+++.++.++|+|||++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~  158 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLS  158 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred             CeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccc
Confidence            67899999999999999997653  367788999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      .....         ........+++.|+|||++.+..+ +.++||||||+++|+|++|..||.....  ...........
T Consensus       159 ~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~  227 (276)
T 2h6d_A          159 NMMSD---------GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV  227 (276)
T ss_dssp             GCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC
T ss_pred             cccCC---------CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc
Confidence            76521         112233458889999999988765 6899999999999999999999965321  11111111110


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .                    ..+..+...+.+++.+||+.||.+|||+.++++
T Consensus       228 ~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          228 F--------------------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             C--------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             c--------------------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            0                    011123457889999999999999999999986


No 180
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=5.7e-45  Score=323.14  Aligned_cols=250  Identities=18%  Similarity=0.282  Sum_probs=204.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.+|+|++...   .....+.+.+|+.+++.++||||+++++++     ...
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~  113 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN  113 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecC
Confidence            456899999999999999999999999999999998644   334557788999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      +..++|||++++++|.+++....  .+++..++.++.|++.||.|||++   +++|+||||+||+++.++.++|+|||++
T Consensus       114 ~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  188 (335)
T 2owb_A          114 DFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA  188 (335)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCc
Confidence            67899999999999999987643  477889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ......        ........+|+.|+|||++.+..++.++||||||+++|+|++|..||....... .........  
T Consensus       189 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~--  257 (335)
T 2owb_A          189 TKVEYD--------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNE--  257 (335)
T ss_dssp             EECCST--------TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTC--
T ss_pred             eecccC--------cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCC--
Confidence            865211        112234568899999999999899999999999999999999999997532111 111111100  


Q ss_pred             chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                              .           .....+...+.+|+.+||+.||++|||+.++++
T Consensus       258 --------~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          258 --------Y-----------SIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             --------C-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --------C-----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    0           111223457889999999999999999999985


No 181
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=9e-45  Score=320.83  Aligned_cols=263  Identities=22%  Similarity=0.318  Sum_probs=202.3

Q ss_pred             hcCCCcCceeeccCeeEEEEee-----ecCCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGI-----LDESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+.+.||+|+||+||+|.     +..+++.||+|.+... .......+.+|+.+++.++||||+++++++     .
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~  103 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L  103 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----c
Confidence            3579999999999999999999     4457789999998643 334456788999999999999999999995     4


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccC-----CccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DI  174 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~  174 (331)
                      .....++|||++++++|.+++.....     ..+++..++.++.|++.||.+||+.   +++|+||||+||+++.   +.
T Consensus       104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~  180 (327)
T 2yfx_A          104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR  180 (327)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred             CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence            45667999999999999999987532     3477788999999999999999999   9999999999999984   44


Q ss_pred             cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcc
Q 046639          175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGL  253 (331)
Q Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~  253 (331)
                      .++|+|||++.......      .........+++.|+|||++.+..++.++||||||+++|+|++ |..||.....  .
T Consensus       181 ~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~  252 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--Q  252 (327)
T ss_dssp             CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H
T ss_pred             eEEECcccccccccccc------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--H
Confidence            69999999997652211      1112223457888999999988899999999999999999998 9999975321  1


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...........        .           .....++..+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus       253 ~~~~~~~~~~~--------~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          253 EVLEFVTSGGR--------M-----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             HHHHHHHTTCC--------C-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHhcCCC--------C-----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            11111111100        0           011234567889999999999999999999999999887643


No 182
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.7e-45  Score=324.69  Aligned_cols=253  Identities=26%  Similarity=0.371  Sum_probs=193.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCC--CCcceeeceeecccCC
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRH--RNLIKIITICSSIDFE  102 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~  102 (331)
                      ...++|.+.+.||+|+||+||+|.+. +++.||+|++...  .......+.+|+.+++.+.|  +||+++++++     .
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~   79 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----I   79 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----E
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----e
Confidence            34678999999999999999999885 6889999998644  33445678999999999986  9999999995     3


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      .....++|||+ .+++|.+++....  .+++..+..++.|++.||.|||+.   +|+||||||+||+++ ++.+||+|||
T Consensus        80 ~~~~~~lv~e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG  152 (343)
T 3dbq_A           80 TDQYIYMVMEC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG  152 (343)
T ss_dssp             CSSEEEEEECC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred             eCCEEEEEEeC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence            45678999995 4889999997643  467888999999999999999999   999999999999997 6789999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCC-----------CCCccchhhHhHHHHHHHHHhCCCCCCcccCC
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-----------SKASVSGDVYNFGILLLEMFTRRRPTDAMFNE  251 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  251 (331)
                      ++......      ..........||+.|+|||++.+           ..++.++||||||+++|+|++|..||......
T Consensus       153 ~a~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  226 (343)
T 3dbq_A          153 IANQMQPD------TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ  226 (343)
T ss_dssp             SSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred             cccccCcc------cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence            99865211      11112234568999999999754           67899999999999999999999999754222


Q ss_pred             cchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          252 GLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .......            .++.....       +...+...+.+|+.+||+.||.+|||+.++++
T Consensus       227 ~~~~~~~------------~~~~~~~~-------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          227 ISKLHAI------------IDPNHEIE-------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHHHHHH------------HCTTSCCC-------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHH------------hcCCcccC-------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            1111111            11111111       11123456889999999999999999999975


No 183
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.3e-44  Score=326.49  Aligned_cols=275  Identities=20%  Similarity=0.241  Sum_probs=199.8

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccC---
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDF---  101 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---  101 (331)
                      +....++|.+.+.||+|+||+||+|.+..+++.||+|++......    ..+|+.+++.++||||+++++++.....   
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            345677999999999999999999999999999999998644222    2379999999999999999999754321   


Q ss_pred             ------------------------------CCcceeeEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHH
Q 046639          102 ------------------------------EGFDFKAIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEY  149 (331)
Q Consensus       102 ------------------------------~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~  149 (331)
                                                    ......++|||+++ ++|.+.+..  ..+..+++..+..++.|++.||.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                          33455889999995 688888765  344567889999999999999999


Q ss_pred             HhhcCCCCeeecCCCCCCEEec-CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCC-Cccchh
Q 046639          150 FHHHCQPSIVHGDLKPSNILLD-QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGD  227 (331)
Q Consensus       150 LH~~~~~~ivH~dik~~nilv~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~D  227 (331)
                      ||+.   ||+||||||+||+++ .++.+||+|||+++....         ........+|+.|+|||++.+.. ++.++|
T Consensus       157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~D  224 (383)
T 3eb0_A          157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP---------SEPSVAYICSRFYRAPELMLGATEYTPSID  224 (383)
T ss_dssp             HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCT---------TSCCCCCCCCSSCCCHHHHTTCSSCCTHHH
T ss_pred             HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCC---------CCCCcCcccCCCccCHHHhcCCCCCCcchh
Confidence            9999   999999999999997 688999999999986521         12223456788999999988754 899999


Q ss_pred             hHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchh--hhhcCcccc----cccccCCc--chHHHHHHHHHHhhc
Q 046639          228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKV--MEIVDPSLL----LEVTANNY--SWIEDCLVAVIGTGV  299 (331)
Q Consensus       228 iwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~--~~~~~~~~~l~~l~~  299 (331)
                      |||+||++|+|++|..||...... ..+............  ....++...    .......+  .+...++..+.+|+.
T Consensus       225 iwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  303 (383)
T 3eb0_A          225 LWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE  303 (383)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHH
Confidence            999999999999999999764221 222222221111100  000000000    00000000  112235667999999


Q ss_pred             cccCCCCCCCCcHHHHHH
Q 046639          300 TCSMESPMERMEMRDVVA  317 (331)
Q Consensus       300 ~cl~~~P~~Rps~~~i~~  317 (331)
                      +||+.||.+|||+.|+++
T Consensus       304 ~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          304 QILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHCCSSGGGSCCHHHHHT
T ss_pred             HHccCChhhCCCHHHHhc
Confidence            999999999999999984


No 184
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.1e-44  Score=315.28  Aligned_cols=255  Identities=21%  Similarity=0.303  Sum_probs=200.9

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc----hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ----KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++....    ......+.+|+.+++.++||||+++++++..   ..
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~   79 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EE   79 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C-
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CC
Confidence            3578999999999999999999999999999999996442    2345678999999999999999999998632   34


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++ +|.+++.......+++..+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||+
T Consensus        80 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C           80 KQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             --CEEEEEECCSE-EHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCeEEEEehhccC-CHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccc
Confidence            5678999999965 488888876666788899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCC--CccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      +.......      .........+|+.|+|||++.+..  ++.++||||||+++|+|++|..||.....  ......+..
T Consensus       156 ~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~  227 (305)
T 2wtk_C          156 AEALHPFA------ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGK  227 (305)
T ss_dssp             CEECCTTC------SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHH
T ss_pred             ccccCccc------cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhc
Confidence            98652111      111223345889999999988754  47899999999999999999999975311  111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..                    ..+...+...+.+++.+||+.||.+|||+.++++
T Consensus       228 ~~--------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          228 GS--------------------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             CC--------------------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CC--------------------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00                    0111234567889999999999999999999985


No 185
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2e-44  Score=323.00  Aligned_cols=281  Identities=19%  Similarity=0.183  Sum_probs=204.9

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-----------hhhHHHHHHHHHHHHcCCCCCc
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-----------KEASRSFAAECNALRNIRHRNL   89 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i   89 (331)
                      ..+++....++|.+.+.||+|+||.||+|.+.. ++.||+|++....           ....+.+.+|+.+++.++||||
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            456788889999999999999999999999864 8899999985321           2234678999999999999999


Q ss_pred             ceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEE
Q 046639           90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNIL  169 (331)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nil  169 (331)
                      +++++++...........++|||++. ++|.+.+... ...+++..+..++.|++.||.|||+.   +++|+||||+||+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL  166 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence            99999986544455567899999995 7998888753 33577889999999999999999999   9999999999999


Q ss_pred             ecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcc
Q 046639          170 LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAM  248 (331)
Q Consensus       170 v~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~  248 (331)
                      ++.++.+||+|||++....         .........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~---------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  237 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDT---------ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS  237 (362)
T ss_dssp             ECTTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             EcCCCCEEEEecCcccccc---------cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence            9999999999999997541         1122234568889999999877 67899999999999999999999999753


Q ss_pred             cCCcchHHHHHHhhCcchh-----------hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          249 FNEGLTLHEFVKMALPDKV-----------MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .. ................           ......................+.+.+.+|+.+||+.||.+|||+.++++
T Consensus       238 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          238 TF-YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             SH-HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CH-HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            21 1112222111111100           00111110000000011122234567899999999999999999999985


No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1e-44  Score=322.01  Aligned_cols=254  Identities=22%  Similarity=0.279  Sum_probs=198.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|++......    ..+|+.++.++ +||||+++++++     .+..
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~   89 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVY-----DDGK   89 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEE-----ECSS
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEE-----EcCC
Confidence            3456799999999999999999999999999999999754332    34678888887 799999999995     4567


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC----CcEEEccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD----IVAHVGDL  181 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~----~~~kl~Df  181 (331)
                      ..++|||++++++|.+++....  .+++..+..++.|++.||.|||++   ||+||||||+||++..+    +.+||+||
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Df  164 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF  164 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence            8899999999999999997643  477899999999999999999999   99999999999998533    35999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++......        ........+|+.|+|||++.+..++.++||||||+++|+|++|..||......  ........
T Consensus       165 g~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~  234 (342)
T 2qr7_A          165 GFAKQLRAE--------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILAR  234 (342)
T ss_dssp             TTCEECBCT--------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHH
T ss_pred             CCcccCcCC--------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHH
Confidence            999865221        11223456899999999998888999999999999999999999999754222  11121111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......      ...       ......++..+.+|+.+||+.||++|||+.++++
T Consensus       235 i~~~~~------~~~-------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          235 IGSGKF------SLS-------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHCCC------CCC-------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HccCCc------ccC-------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            100000      000       0111234567899999999999999999999875


No 187
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-44  Score=321.59  Aligned_cols=274  Identities=20%  Similarity=0.261  Sum_probs=197.6

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh-----hHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE-----ASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      +....++|.+.+.||+|+||+||+|.+..+++.||+|++......     ....+.+|+.+++.++||||+++++++   
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---   81 (346)
T 1ua2_A            5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---   81 (346)
T ss_dssp             --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE---
Confidence            345567899999999999999999999999999999998643221     124678999999999999999999995   


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                        ......++|||+++ ++|.+++.... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+
T Consensus        82 --~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~  154 (346)
T 1ua2_A           82 --GHKSNISLVFDFME-TDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLA  154 (346)
T ss_dssp             --CCTTCCEEEEECCS-EEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred             --eeCCceEEEEEcCC-CCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEE
Confidence              45567899999995 58998886543 3467788999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      |||++......        ........+|+.|+|||++.+. .++.++||||||+++|+|++|.+||..... ...+...
T Consensus       155 Dfg~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i  225 (346)
T 1ua2_A          155 DFGLAKSFGSP--------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRI  225 (346)
T ss_dssp             CCGGGSTTTSC--------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH
T ss_pred             ecccceeccCC--------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHH
Confidence            99999865211        1222344689999999998764 589999999999999999999999976422 1222222


Q ss_pred             HHhhCcchhhh------hcCcccccccccC-CcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVME------IVDPSLLLEVTAN-NYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...........      ..+.......... .......++..+.+|+.+||+.||.+|||+.|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          226 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             HHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            22211110000      0000000000000 00111344578999999999999999999999985


No 188
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=2.2e-44  Score=326.36  Aligned_cols=273  Identities=22%  Similarity=0.304  Sum_probs=208.3

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC--------CCCcceeeceeeccc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR--------HRNLIKIITICSSID  100 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~~~~  100 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++... ......+.+|+.+++.++        |+||+++++++... 
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~-  113 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS-  113 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE-
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec-
Confidence            47899999999999999999999999999999999643 444567889999999985        78899999986532 


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC------
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI------  174 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~------  174 (331)
                      .......++|||++ +++|.+.+.......+++..+..++.|++.||.|||++.  +|+||||||+||+++.++      
T Consensus       114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~  190 (397)
T 1wak_A          114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL  190 (397)
T ss_dssp             ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred             CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence            12456789999999 778888887766566888999999999999999999853  899999999999999776      


Q ss_pred             -------------------------------------------cEEEcccCcccccccCCCCCcccccCCceeecccccc
Q 046639          175 -------------------------------------------VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY  211 (331)
Q Consensus       175 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y  211 (331)
                                                                 .+||+|||++....           .......||+.|
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~-----------~~~~~~~gt~~y  259 (397)
T 1wak_A          191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH-----------KHFTEDIQTRQY  259 (397)
T ss_dssp             HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETT-----------BCSCSCCSCGGG
T ss_pred             hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccc-----------ccCccCCCCCcc
Confidence                                                       79999999998652           112234689999


Q ss_pred             cCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchH-----HHHHHh--hCcchhh-------hhcC-cccc
Q 046639          212 VAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTL-----HEFVKM--ALPDKVM-------EIVD-PSLL  276 (331)
Q Consensus       212 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-----~~~~~~--~~~~~~~-------~~~~-~~~~  276 (331)
                      +|||++.+..++.++|||||||++|+|++|..||..........     ......  ..+....       .... ....
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  339 (397)
T 1wak_A          260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL  339 (397)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred             cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence            99999999999999999999999999999999997654332211     111111  1110000       0000 0000


Q ss_pred             -----------cccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          277 -----------LEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       277 -----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                 .........+.......+.+|+.+||+.||++|||+.++++
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                       00011122345677889999999999999999999999974


No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.5e-44  Score=314.54  Aligned_cols=250  Identities=20%  Similarity=0.281  Sum_probs=203.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+.+++.+.||||+++++++.     .....
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   95 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKL   95 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeE
Confidence            457999999999999999999999999999999997543 334577899999999999999999999864     34678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++..   ..++...+..++.|++.||.+||+.   +++|+||+|+||+++.++.++|+|||++...
T Consensus        96 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL  169 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceec
Confidence            999999999999999864   3477889999999999999999999   9999999999999999999999999999765


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchh
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKV  267 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  267 (331)
                      ...        ........+|+.|+|||++.+..++.++||||||+++|+|++|..||.....  ...........    
T Consensus       170 ~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~----  235 (303)
T 3a7i_A          170 TDT--------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIPKNN----  235 (303)
T ss_dssp             BTT--------BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC----
T ss_pred             Ccc--------ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhhcCC----
Confidence            211        1122345688999999999999999999999999999999999999975321  11111111110    


Q ss_pred             hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHH
Q 046639          268 MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAK  318 (331)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~  318 (331)
                          .+.           ....++..+.+|+.+||+.||.+|||+.++++.
T Consensus       236 ----~~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          236 ----PPT-----------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             ----CCC-----------CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ----CCC-----------CccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                011           111245678999999999999999999999864


No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=6.6e-44  Score=319.78  Aligned_cols=256  Identities=23%  Similarity=0.315  Sum_probs=202.6

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--------hhhHHHHHHHHHHHHcC-CCCCcceeece
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--------KEASRSFAAECNALRNI-RHRNLIKIITI   95 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   95 (331)
                      .....++|.+.+.||+|++|.||+|.+..+++.||||++....        ....+.+.+|+.+++.+ +||||++++++
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            3445678999999999999999999998899999999986442        12245678999999999 79999999998


Q ss_pred             eecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc
Q 046639           96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV  175 (331)
Q Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~  175 (331)
                      +     ......++|||++++++|.+++....  .+++..+..++.|++.||.|||+.   |++|+||||+||+++.++.
T Consensus       169 ~-----~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~  238 (365)
T 2y7j_A          169 Y-----ESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ  238 (365)
T ss_dssp             E-----EBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred             E-----eeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence            5     44567899999999999999997643  477889999999999999999999   9999999999999999999


Q ss_pred             EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC------CCCccchhhHhHHHHHHHHHhCCCCCCccc
Q 046639          176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG------SKASVSGDVYNFGILLLEMFTRRRPTDAMF  249 (331)
Q Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~  249 (331)
                      ++|+|||++.....         ........||+.|+|||++.+      ..++.++||||||+++|+|++|..||....
T Consensus       239 ikl~DfG~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  309 (365)
T 2y7j_A          239 IRLSDFGFSCHLEP---------GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR  309 (365)
T ss_dssp             EEECCCTTCEECCT---------TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEEEecCcccccCC---------CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence            99999999886521         112234568999999998753      358899999999999999999999996531


Q ss_pred             CCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          250 NEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      . ................                 .....++..+.+++.+||+.||++|||+.++++
T Consensus       310 ~-~~~~~~i~~~~~~~~~-----------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          310 Q-ILMLRMIMEGQYQFSS-----------------PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             H-HHHHHHHHHTCCCCCH-----------------HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             H-HHHHHHHHhCCCCCCC-----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1 1111111111110000                 001124567899999999999999999999985


No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.1e-44  Score=336.82  Aligned_cols=252  Identities=22%  Similarity=0.249  Sum_probs=203.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++     ...
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~   98 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDK   98 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence            3457999999999999999999999999999999986432   33456789999999999999999999995     445


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEccc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDL  181 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Df  181 (331)
                      +..++|||++.+++|.+.+....  .+++..+..++.|++.||.|||++   +|+||||||+||++   +.++.+||+||
T Consensus        99 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  173 (484)
T 3nyv_A           99 GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF  173 (484)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence            78899999999999999996543  477899999999999999999999   99999999999999   56789999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++.....         ........||+.|+|||++.+ .++.++||||||+++|+|++|.+||...... .........
T Consensus       174 g~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~  242 (484)
T 3nyv_A          174 GLSTHFEA---------SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKG  242 (484)
T ss_dssp             THHHHBCC---------CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC
T ss_pred             eeeEEccc---------ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcC
Confidence            99987521         122334569999999999876 6899999999999999999999999753211 111111111


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .....                 ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       243 ~~~~~-----------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          243 KYTFE-----------------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CCCCC-----------------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCC-----------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            11000                 0111235667899999999999999999999985


No 192
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=5.5e-44  Score=333.49  Aligned_cols=253  Identities=21%  Similarity=0.238  Sum_probs=200.7

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-------------hhHHHHHHHHHHHHcCCCCCcceee
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-------------EASRSFAAECNALRNIRHRNLIKII   93 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~   93 (331)
                      ...++|.+++.||+|+||+||+|.+..+++.||+|++.....             ...+.+.+|+.+++.++||||++++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            356789999999999999999999999999999999864421             2346788999999999999999999


Q ss_pred             ceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC
Q 046639           94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD  173 (331)
Q Consensus        94 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~  173 (331)
                      +++     ......++|||++++++|.+.+....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.+
T Consensus       113 ~~~-----~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~  182 (504)
T 3q5i_A          113 DVF-----EDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK  182 (504)
T ss_dssp             EEE-----ECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESST
T ss_pred             EEE-----EcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecC
Confidence            995     45678899999999999999997643  477899999999999999999999   99999999999999877


Q ss_pred             C---cEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccC
Q 046639          174 I---VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFN  250 (331)
Q Consensus       174 ~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  250 (331)
                      +   .+||+|||++.....         ........||+.|+|||++.+ .++.++||||+|+++|+|++|..||.....
T Consensus       183 ~~~~~~kl~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  252 (504)
T 3q5i_A          183 NSLLNIKIVDFGLSSFFSK---------DYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND  252 (504)
T ss_dssp             TCCSSEEECCCTTCEECCT---------TSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCCccEEEEECCCCEEcCC---------CCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            6   699999999987521         122334568999999999874 689999999999999999999999975321


Q ss_pred             CcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          251 EGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      . ..............                 ......++..+.+|+.+||+.||.+|||+.++++
T Consensus       253 ~-~~~~~i~~~~~~~~-----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          253 Q-DIIKKVEKGKYYFD-----------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             H-HHHHHHHHCCCCCC-----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H-HHHHHHHcCCCCCC-----------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1 11111111111000                 0111234567899999999999999999999985


No 193
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2.9e-44  Score=317.89  Aligned_cols=264  Identities=20%  Similarity=0.246  Sum_probs=201.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++....   ...+.+|+.+++.++ ||||+++++++..   ......
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~  108 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKD---PVSRTP  108 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCce
Confidence            357999999999999999999999999999999986433   356889999999997 9999999999753   224668


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCC-cEEEcccCcccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI-VAHVGDLGLAKF  186 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~-~~kl~Dfg~a~~  186 (331)
                      ++|||++++++|.+++..     ++...+..++.|++.||.|||++   +++|+||||+||+++.++ .+||+|||++..
T Consensus       109 ~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence            999999999999999853     66788899999999999999999   999999999999999776 899999999986


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                      ...         ........+++.|+|||++.+ ..++.++||||||+++|+|++|..||....................
T Consensus       181 ~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~  251 (330)
T 3nsz_A          181 YHP---------GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE  251 (330)
T ss_dssp             CCT---------TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHH
T ss_pred             cCC---------CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCc
Confidence            521         112233468888999999877 6789999999999999999999999965433222222222211111


Q ss_pred             hhhhhcC-------cc-----------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          266 KVMEIVD-------PS-----------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       266 ~~~~~~~-------~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......+       +.           ......  .......+...+.+|+.+||+.||.+|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGC--CTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhHHHHhccccccchhhhhhhccccchhhhc--cccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            1111000       00           000000  00112235678999999999999999999999985


No 194
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.1e-44  Score=327.50  Aligned_cols=251  Identities=26%  Similarity=0.372  Sum_probs=192.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCC--CCCcceeeceeecccCCCc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIR--HRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~  104 (331)
                      .++|.+++.||+|+||+||+|.+.. ++.||||++...  .......+.+|+.+++.+.  ||||+++++++.     ..
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~  128 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TD  128 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cC
Confidence            3569999999999999999999874 889999998654  3445577899999999996  599999999854     34


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++||| +.+++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++ ++.+||+|||++
T Consensus       129 ~~~~lv~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a  201 (390)
T 2zmd_A          129 QYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIA  201 (390)
T ss_dssp             SEEEEEEE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSS
T ss_pred             CEEEEEEe-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcc
Confidence            56899999 55889999997654  466788899999999999999999   999999999999995 589999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCC-----------CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-----------SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL  253 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  253 (331)
                      ..+....      .........||+.|+|||++.+           ..++.++||||||+++|+|++|..||........
T Consensus       202 ~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~  275 (390)
T 2zmd_A          202 NQMQPDT------TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS  275 (390)
T ss_dssp             CCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             ccccCCC------ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH
Confidence            8652111      1112234569999999999865           4689999999999999999999999975322111


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .+...            .++.....+       ...+...+.+|+.+||+.||.+|||+.++++
T Consensus       276 ~~~~~------------~~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          276 KLHAI------------IDPNHEIEF-------PDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHH------------HCTTSCCCC-------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHH------------hCccccCCC-------CccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            11111            111111111       1112456889999999999999999999985


No 195
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=319.83  Aligned_cols=271  Identities=18%  Similarity=0.251  Sum_probs=203.9

Q ss_pred             ccCCcccHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceee
Q 046639           15 QQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKII   93 (331)
Q Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~   93 (331)
                      ...+.+++.++....++|.+.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .||||++++
T Consensus         9 ~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~   87 (326)
T 2x7f_A            9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYY   87 (326)
T ss_dssp             -------CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred             CcchhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeee
Confidence            34455666677777889999999999999999999999899999999997543 2346688999999998 799999999


Q ss_pred             ceeecccC-CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC
Q 046639           94 TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ  172 (331)
Q Consensus        94 ~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~  172 (331)
                      +++..... ......++|||++++++|.+++.......++...+..++.|++.||.+||+.   +++|+||||+||+++.
T Consensus        88 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A           88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTE  164 (326)
T ss_dssp             EEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECT
T ss_pred             eEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcC
Confidence            99764321 1146789999999999999999876555678888999999999999999999   9999999999999999


Q ss_pred             CCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccC-----CCCCccchhhHhHHHHHHHHHhCCCCCCc
Q 046639          173 DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM-----GSKASVSGDVYNFGILLLEMFTRRRPTDA  247 (331)
Q Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~  247 (331)
                      ++.++|+|||++......        ........+|+.|+|||++.     +..++.++||||||+++|+|++|..||..
T Consensus       165 ~~~~kl~Dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  236 (326)
T 2x7f_A          165 NAEVKLVDFGVSAQLDRT--------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD  236 (326)
T ss_dssp             TCCEEECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCEEEeeCcCceecCcC--------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            999999999998765211        11223346899999999987     55689999999999999999999999965


Q ss_pred             ccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          248 MFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....  .........        ..+...          ...++..+.+++.+||+.||.+|||+.++++
T Consensus       237 ~~~~--~~~~~~~~~--------~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          237 MHPM--RALFLIPRN--------PAPRLK----------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             SCHH--HHHHHHHHS--------CCCCCS----------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CcHH--HHHHHhhcC--------ccccCC----------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            3211  111111110        001100          0123467889999999999999999999986


No 196
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=3.9e-44  Score=333.71  Aligned_cols=252  Identities=19%  Similarity=0.235  Sum_probs=197.3

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+++.||+|+||+||+|++..++..||+|++....  ......+.+|+.+++.++||||+++++++     ....
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~  109 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKR  109 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence            4457999999999999999999999999999999986543  23346788999999999999999999995     4456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC---CcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD---IVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~---~~~kl~Dfg  182 (331)
                      ..++||||+++++|.+.+....  .+++..+..++.|++.||.|||++   +|+||||||+||+++..   +.+||+|||
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG  184 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFG  184 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECC
Confidence            7899999999999999887653  367788999999999999999999   99999999999999764   559999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++.....         ........||+.|+|||++.+ .++.++||||||+++|+|++|..||...... ..........
T Consensus       185 ~a~~~~~---------~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~  253 (494)
T 3lij_A          185 LSAVFEN---------QKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGK  253 (494)
T ss_dssp             TCEECBT---------TBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTC
T ss_pred             CCeECCC---------CccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC
Confidence            9987521         122334569999999999864 6899999999999999999999999764221 1111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...      ..           .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       254 ~~~------~~-----------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          254 YTF------DS-----------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CCC------CS-----------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCC------Cc-----------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            100      00           111234567889999999999999999999985


No 197
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.9e-44  Score=341.85  Aligned_cols=261  Identities=19%  Similarity=0.306  Sum_probs=203.5

Q ss_pred             CCcCc-eeeccCeeEEEEeeec--CCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           32 FSPAN-KIGQGGVSIVYKGILD--ESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        32 y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      +.+.+ .||+|+||+||+|.+.  .++..||||+++... ....+.+.+|+.+++.++||||++++++|..      +..
T Consensus       337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~  410 (613)
T 2ozo_A          337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL  410 (613)
T ss_dssp             EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred             eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence            33344 7999999999999875  456779999997543 3345779999999999999999999999742      348


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++... ...+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++..
T Consensus       411 ~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          411 MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             EEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             EEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence            9999999999999999654 34577899999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ....     ..........+++.|+|||++.+..++.++||||||+++|||++ |..||......  .....+....   
T Consensus       487 ~~~~-----~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~---  556 (613)
T 2ozo_A          487 GADD-----SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK---  556 (613)
T ss_dssp             C-------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTC---
T ss_pred             cCCC-----ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC---
Confidence            2111     11111122335678999999998899999999999999999998 99999865322  1211111110   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                               ..       ..+..++..+.+|+.+||+.||++|||+.+|++.|+.+..+...
T Consensus       557 ---------~~-------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          557 ---------RM-------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             ---------CC-------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             ---------CC-------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence                     00       11234667899999999999999999999999999998877654


No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.8e-44  Score=323.07  Aligned_cols=265  Identities=20%  Similarity=0.279  Sum_probs=202.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      .++|.+.+.||+|+||+||+|.+..++..||+|++... .......+.+|+.+++.++||||+++++++.     ..+..
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~  106 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI  106 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-----ETTEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-----ECCEE
Confidence            45799999999999999999999999999999999755 3444577899999999999999999999854     35678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++....  .++...+..++.|++.||.|||+..  +++|+||||+||+++.++.++|+|||++...
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          107 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             EEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            99999999999999997654  3677889999999999999999842  8999999999999999999999999998765


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc---
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP---  264 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---  264 (331)
                      ..          .......||+.|+|||++.+..++.++||||||+++|+|++|..||.......  ..........   
T Consensus       183 ~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~  250 (360)
T 3eqc_A          183 ID----------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDA  250 (360)
T ss_dssp             HH----------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC-------
T ss_pred             cc----------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccC
Confidence            21          12234568999999999999999999999999999999999999997532211  1111000000   


Q ss_pred             ------------------------chhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 ------------------------DKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                                              .......+.......   .......++..+.+|+.+||+.||++|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP---PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             -----------------------CCCHHHHHHHHHHSCC---CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC---CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                    000000000000000   00000124567899999999999999999999985


No 199
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=6.9e-45  Score=317.85  Aligned_cols=254  Identities=19%  Similarity=0.244  Sum_probs=199.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++.     ..+..
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   91 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY-----HDGKL   91 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CC-CE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-----eCCeE
Confidence            3468999999999999999999999999999999997666666678899999999999999999999954     35678


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++.... ..++...+..++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++...
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN  167 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence            99999999999999987633 3477889999999999999999999   9999999999999999999999999987643


Q ss_pred             ccCCCCCcccccCCceeecccccccCCccc-----CCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYG-----MGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ..        .........+|+.|+|||++     .+..++.++||||||+++|+|++|..||....... .........
T Consensus       168 ~~--------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~  238 (302)
T 2j7t_A          168 LK--------TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSD  238 (302)
T ss_dssp             HH--------HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC
T ss_pred             cc--------cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccC
Confidence            11        11122334688999999997     46678999999999999999999999997542111 111111111


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .         +..         .....++..+.+++.+||+.||.+|||+.++++
T Consensus       239 ~---------~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          239 P---------PTL---------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             C---------CCC---------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             C---------ccc---------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0         000         111234567899999999999999999999975


No 200
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.6e-44  Score=317.14  Aligned_cols=253  Identities=18%  Similarity=0.241  Sum_probs=197.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--------hhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--------EASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||||++.....        .....+.+|+.+++.++||||+++++++.. 
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-   86 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-   86 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-
Confidence            44679999999999999999999999999999999864321        122457899999999999999999998632 


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc---E
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV---A  176 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~---~  176 (331)
                           ...++|||++++++|.+++...  ..++...+..++.|++.||.|||++   +++|+||||+||+++.++.   +
T Consensus        87 -----~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~  156 (322)
T 2ycf_A           87 -----EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI  156 (322)
T ss_dssp             -----SSEEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred             -----CceEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence                 2379999999999999998643  3577889999999999999999999   9999999999999987664   9


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccC---CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcc
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM---GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGL  253 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  253 (331)
                      ||+|||++....         .........||+.|+|||++.   ...++.++||||||+++|+|++|..||........
T Consensus       157 kl~Dfg~~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  227 (322)
T 2ycf_A          157 KITDFGHSKILG---------ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS  227 (322)
T ss_dssp             EECCCTTCEECC---------CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC
T ss_pred             EEccCccceecc---------cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH
Confidence            999999997651         111122356899999999963   56789999999999999999999999976433322


Q ss_pred             hHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          254 TLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ............      .+           .....++..+.+|+.+||+.||++|||+.++++
T Consensus       228 ~~~~~~~~~~~~------~~-----------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          228 LKDQITSGKYNF------IP-----------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHHTCCCC------CH-----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhCcccc------Cc-----------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            222221111100      00           111234567899999999999999999999984


No 201
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=3.2e-44  Score=311.19  Aligned_cols=246  Identities=19%  Similarity=0.207  Sum_probs=197.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++...  .......+.+|+..+..+ +||||+++++++.     ..
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~-----~~   83 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA-----ED   83 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-----ET
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-----cC
Confidence            346799999999999999999999999999999998753  233456788999999999 8999999999953     45


Q ss_pred             ceeeEEEeecCCCCHHHHHHhcc--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC---------
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD---------  173 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~---------  173 (331)
                      +..++|||++++++|.+++....  ...+++..++.++.|++.||.|||++   +++|+||||+||+++.+         
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccc
Confidence            67899999999999999997642  24577899999999999999999999   99999999999999844         


Q ss_pred             ----------CcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCC
Q 046639          174 ----------IVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRR  242 (331)
Q Consensus       174 ----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~  242 (331)
                                ..++|+|||.+.....            .....+|+.|+|||++.+. .++.++||||||+++|+|++|.
T Consensus       161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~  228 (289)
T 1x8b_A          161 GDEDDWASNKVMFKIGDLGHVTRISS------------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE  228 (289)
T ss_dssp             ---------CCCEEECCCTTCEETTC------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred             cccccccCCceEEEEcccccccccCC------------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence                      4799999999986521            1123488999999998876 5678999999999999999998


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      +|+...    ...........         +           .....++..+.+++.+||+.||++|||+.++++
T Consensus       229 ~~~~~~----~~~~~~~~~~~---------~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          229 PLPRNG----DQWHEIRQGRL---------P-----------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             CCCSSS----HHHHHHHTTCC---------C-----------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCcch----hHHHHHHcCCC---------C-----------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            876432    11111111110         1           111224567899999999999999999999974


No 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.1e-44  Score=312.98  Aligned_cols=254  Identities=22%  Similarity=0.279  Sum_probs=188.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++....  ......+..+...++.++||||+++++++.     ..+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~   79 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG   79 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccC
Confidence            3468999999999999999999999999999999986442  222233445555678889999999999954     456


Q ss_pred             eeeEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ..++|||+++ ++|.+++..  .....+++..+..++.|++.||.|||++.  +++|+||||+||+++.++.+||+|||+
T Consensus        80 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T 3fme_A           80 DVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGI  156 (290)
T ss_dssp             SEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--
T ss_pred             CEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCC
Confidence            7899999995 699888765  23456788999999999999999999853  899999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCccc----CCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG----MGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      +.....         ........+|+.|+|||++    .+..++.++||||||+++|+|++|..||..............
T Consensus       157 ~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  227 (290)
T 3fme_A          157 SGYLVD---------DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV  227 (290)
T ss_dssp             ----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred             cccccc---------cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh
Confidence            976521         1122234588999999996    556789999999999999999999999975432222222222


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....+.         .          ....++..+.+++.+||+.||++|||+.++++
T Consensus       228 ~~~~~~---------~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          228 EEPSPQ---------L----------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HSCCCC---------C----------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCCCC---------c----------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            211111         0          00124567899999999999999999999987


No 203
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.1e-45  Score=333.02  Aligned_cols=255  Identities=15%  Similarity=0.137  Sum_probs=192.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeec---cchhhHHHHHHHHH---HHHcCCCCCcceeeceeeccc--
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL---KQKEASRSFAAECN---ALRNIRHRNLIKIITICSSID--  100 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~---~l~~l~h~~i~~~~~~~~~~~--  100 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||||++..   ......+.+.+|+.   +++.++||||+++++.+....  
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            4679999999999999999999988999999999963   33445577889995   455557999999985432100  


Q ss_pred             CCCc------------c-----eeeEEEeecCCCCHHHHHHhcc-----CCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046639          101 FEGF------------D-----FKAIVFEYMQNRNLEQWLRQSN-----GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSI  158 (331)
Q Consensus       101 ~~~~------------~-----~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~i  158 (331)
                      +...            +     ..++|||++ +|+|.+++....     ...+++..++.++.|++.||+|||++   +|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            1111            1     378999999 789999998632     12233577788999999999999999   99


Q ss_pred             eecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-----------CCccchh
Q 046639          159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-----------KASVSGD  227 (331)
Q Consensus       159 vH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~D  227 (331)
                      +||||||+||+++.++.+||+|||+++..           ........| +.|+|||++.+.           .++.++|
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~-----------~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  295 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRD-----------GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD  295 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEET-----------TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheec-----------CCcccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence            99999999999999999999999999753           112233456 889999999887           8999999


Q ss_pred             hHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCC
Q 046639          228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPM  307 (331)
Q Consensus       228 iwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~  307 (331)
                      |||||+++|+|++|..||........          ...+   ...             ...++..+.+|+.+||+.||+
T Consensus       296 vwSlG~il~elltg~~Pf~~~~~~~~----------~~~~---~~~-------------~~~~~~~~~~li~~~L~~dp~  349 (377)
T 3byv_A          296 AWALGLVIYWIWCADLPITKDAALGG----------SEWI---FRS-------------CKNIPQPVRALLEGFLRYPKE  349 (377)
T ss_dssp             HHHHHHHHHHHHHSSCCC------CC----------SGGG---GSS-------------CCCCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHHHHHHHHCCCCCcccccccc----------hhhh---hhh-------------ccCCCHHHHHHHHHHcCCCch
Confidence            99999999999999999965322110          0000   000             012456788999999999999


Q ss_pred             CCCcHHHHHH--HHHHhhhh
Q 046639          308 ERMEMRDVVA--KLRHARET  325 (331)
Q Consensus       308 ~Rps~~~i~~--~L~~~~~~  325 (331)
                      +|||+.++++  +++.+.+.
T Consensus       350 ~Rpt~~e~l~hp~f~~~~~~  369 (377)
T 3byv_A          350 DRLLPLQAMETPEYEQLRTE  369 (377)
T ss_dssp             GCCCHHHHHTSHHHHHHHHH
T ss_pred             hCCCHHHHhhChHHHHHHHH
Confidence            9999999986  55555544


No 204
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3.3e-44  Score=342.30  Aligned_cols=255  Identities=23%  Similarity=0.325  Sum_probs=200.8

Q ss_pred             ceeeccCeeEEEEeee--cCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceeeEEE
Q 046639           36 NKIGQGGVSIVYKGIL--DESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVF  111 (331)
Q Consensus        36 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~lv~  111 (331)
                      +.||+|+||+||+|.+  ..+++.||||+++...  ....+.+.+|+.+++.++||||++++++|..      ...++||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~  448 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM  448 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence            3799999999999955  4567899999997542  3345779999999999999999999998632      3478999


Q ss_pred             eecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccccCC
Q 046639          112 EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE  191 (331)
Q Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~  191 (331)
                      |++++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++.+....
T Consensus       449 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          449 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             EccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            9999999999997543  477889999999999999999999   99999999999999999999999999998762211


Q ss_pred             CCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcchhhhh
Q 046639          192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDKVMEI  270 (331)
Q Consensus       192 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  270 (331)
                           ..........+|+.|+|||++.+..++.++||||||+++|||++ |..||......  .....+.....      
T Consensus       524 -----~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~------  590 (635)
T 4fl3_A          524 -----NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER------  590 (635)
T ss_dssp             ----------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC------
T ss_pred             -----cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC------
Confidence                 11112223346778999999999899999999999999999998 99999764221  11111111100      


Q ss_pred             cCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          271 VDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                        .           ..+..++..+.+|+..||+.||++|||+.+|++.|+.+..++.
T Consensus       591 --~-----------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          591 --M-----------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             --C-----------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             --C-----------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence              0           1122456789999999999999999999999999999887764


No 205
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=5e-44  Score=315.77  Aligned_cols=277  Identities=19%  Similarity=0.277  Sum_probs=206.8

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeec-CCCceEEEEEeeccch--hhHHHHHHHHHHHHcC---CCCCcceeeceeeccc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLKQK--EASRSFAAECNALRNI---RHRNLIKIITICSSID  100 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~  100 (331)
                      ...++|.+.+.||+|+||+||+|.+. .+++.||+|++.....  .....+.+|+.+++.+   .||||+++++++....
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            34578999999999999999999995 6788999999864432  1123455677777666   8999999999976433


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcc
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~D  180 (331)
                      .......++|||++. ++|.+++.......+++..+..++.|++.||.+||+.   |++|+||||+||+++.++.++|+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence            345678899999995 6999999886666688899999999999999999999   999999999999999999999999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHH
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK  260 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  260 (331)
                      ||++....         .........+|+.|+|||++.+..++.++||||||+++|+|++|..||...... ........
T Consensus       164 fg~~~~~~---------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~  233 (326)
T 1blx_A          164 FGLARIYS---------FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD  233 (326)
T ss_dssp             CCSCCCCC---------GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred             Cccccccc---------CCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH
Confidence            99987641         111223456889999999999999999999999999999999999999764221 12222222


Q ss_pred             hhCcchhhhhcC----c--ccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          261 MALPDKVMEIVD----P--SLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       261 ~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ............    +  ............+...++..+.+|+.+||+.||.+|||+.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            111100000000    0  00000000111222345678899999999999999999999984


No 206
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=7.7e-45  Score=341.05  Aligned_cols=260  Identities=25%  Similarity=0.411  Sum_probs=207.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCccee
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ..++|.+.+.||+|+||+||+|.+.. +..||||+++... ...+.+.+|+.+++.++|+||+++++++..      ...
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~  336 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI  336 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccc
Confidence            45679999999999999999999975 4569999997543 234678999999999999999999998632      457


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      ++|||++++++|.+++....+..+++..++.++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+++..
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            9999999999999999765445577889999999999999999999   9999999999999999999999999999865


Q ss_pred             ccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHhhCcch
Q 046639          188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ..       ..........++..|+|||++.+..++.++||||||+++|||++ |..||......  .....+....   
T Consensus       414 ~~-------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~---  481 (535)
T 2h8h_A          414 ED-------NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGY---  481 (535)
T ss_dssp             CC-------HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTC---
T ss_pred             CC-------CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---
Confidence            21       01111122346678999999998899999999999999999999 99999764221  1111111110   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                           .    .       .....++..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus       482 -----~----~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          482 -----R----M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             -----C----C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             -----C----C-------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence                 0    0       111245678899999999999999999999999999876544


No 207
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.4e-44  Score=345.40  Aligned_cols=245  Identities=19%  Similarity=0.250  Sum_probs=200.9

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc---chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCC
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  103 (331)
                      ..++|.+++.||+|+||+||+|++..+++.||||++...   .......+..|..++..+ .||+|+.++++     +.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence            456899999999999999999999999999999999743   233446678899999988 69999999998     566


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+.+++||||+++++|.+++....  .+++..+..++.|++.||.|||++   +|+||||||+|||++.+|.+||+|||+
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGl  488 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM  488 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTT
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecce
Confidence            678999999999999999998654  477889999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ++....        .........||+.|+|||++.+..++.++||||||+++|||++|..||..... ...+..+...  
T Consensus       489 a~~~~~--------~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~~--  557 (674)
T 3pfq_A          489 CKENIW--------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEH--  557 (674)
T ss_dssp             CEECCC--------TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHSS--
T ss_pred             eecccc--------CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHHHHhC--
Confidence            985311        11223456799999999999999999999999999999999999999975321 1111111110  


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcH
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEM  312 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~  312 (331)
                                         ...++......+.+|+.+||+.||.+||++
T Consensus       558 -------------------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          558 -------------------NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             -------------------CCCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             -------------------CCCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence                               011223356678999999999999999997


No 208
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.1e-44  Score=324.80  Aligned_cols=270  Identities=17%  Similarity=0.219  Sum_probs=188.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecc-cCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~~  105 (331)
                      .++|.+++.||+|+||.||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++... ......
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46899999999999999999999999999999998643  334456788999999999999999999997532 123345


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|+|++ +++|.+++..   ..++...+..++.|++.||.|||+.   ||+||||||+||+++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            679999999 8899999865   3477889999999999999999999   99999999999999999999999999997


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ...           .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ...+..+......
T Consensus       181 ~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~  248 (367)
T 2fst_X          181 HTA-----------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGT  248 (367)
T ss_dssp             ---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCS
T ss_pred             ccc-----------ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC
Confidence            641           11234568999999999887 6789999999999999999999999976422 1122222221111


Q ss_pred             --chhhhhcCcccc----ccc---c-cCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 --DKVMEIVDPSLL----LEV---T-ANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 --~~~~~~~~~~~~----~~~---~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                        ......+.....    ...   . .........+.+.+.+|+.+||+.||.+|||+.++++
T Consensus       249 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence              000000000000    000   0 0000111234567899999999999999999999975


No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.1e-43  Score=327.86  Aligned_cols=270  Identities=17%  Similarity=0.204  Sum_probs=210.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      .++|.+.+.||+|+||.||+|++..+++.||||++.....  ...+..|+.+++.+.|++.+..+.++    .......+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~----~~~~~~~~   79 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWF----GVEGDYNV   79 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEE----EEETTEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEE----EeeCCEEE
Confidence            4689999999999999999999999999999998864432  23477899999999876555555544    23456789


Q ss_pred             EEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe---cCCCcEEEcccCccc
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAK  185 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv---~~~~~~kl~Dfg~a~  185 (331)
                      +|||++ +++|.+++.... ..+++..++.++.|++.||.|||++   +|+||||||+|||+   +.++.+||+|||+++
T Consensus        80 lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A           80 LVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             EEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             EEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            999999 999999997543 3478899999999999999999999   99999999999999   588999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch--HHHHHHhhC
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT--LHEFVKMAL  263 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~  263 (331)
                      .+........ ..........||+.|+|||++.+..++.++||||||+++|+|++|..||.........  +........
T Consensus       155 ~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~  233 (483)
T 3sv0_A          155 KYRDTSTHQH-IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV  233 (483)
T ss_dssp             ECBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH
T ss_pred             eccCCccccc-cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc
Confidence            7643222111 1112233567999999999999999999999999999999999999999875432211  111111111


Q ss_pred             cchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          264 PDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ...+.                .....++..+.+|+..||+.+|++||++.+|++.|+.+....
T Consensus       234 ~~~~~----------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          234 ATSIE----------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HSCHH----------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cccHH----------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            11110                111234678999999999999999999999999999987644


No 210
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=5.6e-44  Score=318.94  Aligned_cols=282  Identities=21%  Similarity=0.262  Sum_probs=205.8

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++....+.....
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            456899999999999999999999999999999998643 3344567889999999999999999999876555556678


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++. ++|.+++...   .++...+..++.|++.||.+||++   +++|+||||+||+++.++.+||+|||++..
T Consensus        89 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            899999995 6999998763   477889999999999999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCc--ccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          187 LFGYEPGTA--AETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       187 ~~~~~~~~~--~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      .........  ...........||+.|+|||++.+ ..++.++||||||+++|+|++|..||....... ..........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~  240 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIG  240 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhC
Confidence            632211110  001112234568999999998654 678999999999999999999999997642211 1111111100


Q ss_pred             cch---hhhhcCc-c-------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDK---VMEIVDP-S-------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~---~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...   ....... .       +..............++..+.+|+.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000   0000000 0       0000000000111245678899999999999999999999986


No 211
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.4e-44  Score=320.16  Aligned_cols=268  Identities=22%  Similarity=0.253  Sum_probs=199.1

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++....  ......+.+|+.+++.++||||+++++++.     ....
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCE
Confidence            357999999999999999999999999999999985443  333466789999999999999999999964     4567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++....  .+++..+..++.|++.||.+||+.   +++|+||||+||+++.++.++|+|||++..
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART  173 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             EEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence            899999998888888765433  477899999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC--
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL--  263 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--  263 (331)
                      ....        ........+|+.|+|||++.+. .++.++||||||+++|+|++|..||....... ..........  
T Consensus       174 ~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~  244 (331)
T 4aaa_A          174 LAAP--------GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNL  244 (331)
T ss_dssp             ------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSC
T ss_pred             ecCC--------ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence            5211        1222334588999999998875 68999999999999999999999997643221 1111111100  


Q ss_pred             cchh----------hhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PDKV----------MEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....          .....+.....  .........++..+.+|+.+||+.||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          245 IPRHQELFNKNPVFAGVRLPEIKER--EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CHHHHHHHHHCGGGTTCCCCCCSSC--CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ChhhhhHhhhccccccccCcccccc--chhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0000          00000000000  0000111235678999999999999999999999875


No 212
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.6e-43  Score=315.81  Aligned_cols=279  Identities=20%  Similarity=0.259  Sum_probs=202.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--hhHHHHHHHHHHHHcCCCCCcceeeceeecccC---CC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--EASRSFAAECNALRNIRHRNLIKIITICSSIDF---EG  103 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~~  103 (331)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++.....  .....+.+|+.+++.++||||+++++++.....   ..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            4689999999999999999999999999999999854432  234567899999999999999999999765321   11


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+..++|||+++ ++|.+.+.... ..+++..+..++.|++.||.|||++   ||+|+||||+||+++.++.+||+|||+
T Consensus        96 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           96 KGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             -CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence            456899999995 58888876543 3477899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      +..+.....    ..........||+.|+|||++.+ ..++.++||||||+++|+|++|..||...... ..........
T Consensus       171 a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~  245 (351)
T 3mi9_A          171 ARAFSLAKN----SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLC  245 (351)
T ss_dssp             CEECCCCSS----SSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH
T ss_pred             ccccccccc----ccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence            987632211    11122234568999999999876 45899999999999999999999999764221 1111211111


Q ss_pred             --Ccchhhhhc-Ccccccc---cccCCcchHHH-----HHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 --LPDKVMEIV-DPSLLLE---VTANNYSWIED-----CLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 --~~~~~~~~~-~~~~~~~---~~~~~~~~~~~-----~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                        .+....... .......   ...........     ..+.+.+|+.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence              111110000 0000000   00000111111     1356889999999999999999999985


No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.2e-43  Score=309.31  Aligned_cols=254  Identities=23%  Similarity=0.283  Sum_probs=202.5

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---------hhhHHHHHHHHHHHHcCC-CCCcceeecee
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---------KEASRSFAAECNALRNIR-HRNLIKIITIC   96 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~   96 (331)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++....         ....+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            45678999999999999999999999999999999996543         223466889999999995 99999999995


Q ss_pred             ecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcE
Q 046639           97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA  176 (331)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~  176 (331)
                           ......++|||++++++|.+++....  .++...+..++.|++.||.+||++   +++|+||+|+||+++.++.+
T Consensus        94 -----~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~  163 (298)
T 1phk_A           94 -----ETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI  163 (298)
T ss_dssp             -----ECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred             -----ccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence                 44577899999999999999997643  477889999999999999999999   99999999999999999999


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccC------CCCCccchhhHhHHHHHHHHHhCCCCCCcccC
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM------GSKASVSGDVYNFGILLLEMFTRRRPTDAMFN  250 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  250 (331)
                      +|+|||++.....         ........+++.|+|||++.      ...++.++||||||+++|+|++|..||.....
T Consensus       164 kl~dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  234 (298)
T 1phk_A          164 KLTDFGFSCQLDP---------GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ  234 (298)
T ss_dssp             EECCCTTCEECCT---------TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEecccchhhcCC---------CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH
Confidence            9999999986521         11223356889999999874      45688999999999999999999999965321


Q ss_pred             CcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          251 EGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                       ..............     ..            .....++..+.+++.+||+.||.+|||+.++++
T Consensus       235 -~~~~~~~~~~~~~~-----~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          235 -MLMLRMIMSGNYQF-----GS------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             -HHHHHHHHHTCCCC-----CT------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -HHHHHHHhcCCccc-----Cc------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence             11111111111000     00            111235667899999999999999999999974


No 214
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.4e-44  Score=313.98  Aligned_cols=253  Identities=21%  Similarity=0.263  Sum_probs=198.0

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|.+....  ....+.+|+.+++.++||||+++++++.     ..+.
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   98 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTD   98 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCE
Confidence            34568999999999999999999999999999999996543  3456889999999999999999999964     3467


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++|||++++++|.+++... ...++...+..++.|++.||.+||+.   +++|+||+|+||+++.++.++|+|||++..
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  174 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQ  174 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence            89999999999999999743 23477889999999999999999999   999999999999999999999999999976


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ....        ........+++.|+|||++.+..++.++||||||+++|+|++|..||......  ..........   
T Consensus       175 ~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~---  241 (314)
T 3com_A          175 LTDT--------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAIFMIPTNP---  241 (314)
T ss_dssp             CBTT--------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC---
T ss_pred             hhhh--------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhcCC---
Confidence            5211        11223456889999999999989999999999999999999999999753211  1111111110   


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                           .+..         .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       242 -----~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          242 -----PPTF---------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -----CCCC---------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -----Cccc---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                 0000         112234567899999999999999999999985


No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.1e-44  Score=316.58  Aligned_cols=268  Identities=19%  Similarity=0.256  Sum_probs=185.2

Q ss_pred             HHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++.     ..+
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   86 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----VKD   86 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----SSS
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----ecC
Confidence            44678999999999999999999998889999999886443 233466889999999999999999999853     345


Q ss_pred             eeeEEEeecCCCCHHHHHHhc------cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQS------NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                      ..++|||++++++|.+++...      ....+++..++.++.|++.||.+||+.   +++|+||||+||+++.++.++|+
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~  163 (303)
T 2vwi_A           87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA  163 (303)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred             CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence            689999999999999999751      234577899999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      |||++........   ...........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||........ ....
T Consensus       164 dfg~~~~~~~~~~---~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~  239 (303)
T 2vwi_A          164 DFGVSAFLATGGD---ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLT  239 (303)
T ss_dssp             CCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHH
T ss_pred             eccchheeccCCC---ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHH
Confidence            9999976522110   011122234568999999999876 5689999999999999999999999976432221 1111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .....+.......++           .....++..+.+++.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          240 LQNDPPSLETGVQDK-----------EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HTSSCCCTTC----------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hccCCCccccccccc-----------hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            111111100000011           111234567889999999999999999999986


No 216
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.3e-44  Score=321.92  Aligned_cols=261  Identities=13%  Similarity=0.087  Sum_probs=204.3

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEee-----ecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC---CCCcceeece
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGI-----LDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR---HRNLIKIITI   95 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~   95 (331)
                      ++....++|.+.+.||+|+||+||+|.     +..+++.||+|++.....   ..+..|+.+++.+.   |+|++.++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            334456789999999999999999994     566889999999975433   35667777777775   9999999998


Q ss_pred             eecccCCCcceeeEEEeecCCCCHHHHHHhc---cCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC
Q 046639           96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ  172 (331)
Q Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~  172 (331)
                      +.     ..+..++||||+++++|.+++...   ....+++..++.++.|++.||.|||+.   +|+||||||+||+++.
T Consensus       136 ~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          136 HL-----FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGN  207 (365)
T ss_dssp             EE-----CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECG
T ss_pred             ee-----cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecc
Confidence            53     346789999999999999999752   345688899999999999999999999   9999999999999998


Q ss_pred             -----------CCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhC
Q 046639          173 -----------DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR  241 (331)
Q Consensus       173 -----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  241 (331)
                                 ++.+||+|||+++.+....      .........||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  281 (365)
T 3e7e_A          208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFP------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG  281 (365)
T ss_dssp             GGTCC------CTTEEECCCTTCEEGGGSC------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS
T ss_pred             cccCccccccccCCEEEeeCchhhhhhccC------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence                       8999999999997652211      11223345689999999999999999999999999999999999


Q ss_pred             CCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCC-CcHHHHHHHHH
Q 046639          242 RRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMER-MEMRDVVAKLR  320 (331)
Q Consensus       242 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-ps~~~i~~~L~  320 (331)
                      ..||.........            +    .. .....         .....+.+++..||+.+|.+| |++.++.+.|+
T Consensus       282 ~~pf~~~~~~~~~------------~----~~-~~~~~---------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~  335 (365)
T 3e7e_A          282 TYMKVKNEGGECK------------P----EG-LFRRL---------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK  335 (365)
T ss_dssp             SCCCEEEETTEEE------------E----CS-CCTTC---------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             CCccccCCCCcee------------e----ch-hcccc---------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence            9999654221100            0    00 00000         124567788889999999999 78899998888


Q ss_pred             Hhhhhhh
Q 046639          321 HARETFL  327 (331)
Q Consensus       321 ~~~~~~~  327 (331)
                      ...+...
T Consensus       336 ~~l~~~~  342 (365)
T 3e7e_A          336 KVFQQHY  342 (365)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhh
Confidence            8776543


No 217
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.8e-43  Score=319.00  Aligned_cols=205  Identities=24%  Similarity=0.258  Sum_probs=171.6

Q ss_pred             HHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CC-----Ccceeeceeec
Q 046639           25 LSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HR-----NLIKIITICSS   98 (331)
Q Consensus        25 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~   98 (331)
                      .....++|.+.+.||+|+||+||+|.+..+++.||||++... ......+..|+.+++.++ |+     +++.+++++  
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~--  125 (382)
T 2vx3_A           49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF--  125 (382)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE--
T ss_pred             CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee--
Confidence            344567899999999999999999999999999999999743 334566778888888875 55     488888874  


Q ss_pred             ccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec--CCCcE
Q 046639           99 IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--QDIVA  176 (331)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~--~~~~~  176 (331)
                         ...+..++|||++ +++|.+++.......+++..+..++.|++.||.|||+. ..+|+||||||+||+++  .++.+
T Consensus       126 ---~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~  200 (382)
T 2vx3_A          126 ---MFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI  200 (382)
T ss_dssp             ---EETTEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred             ---ccCCceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence               3356889999999 56999999887656688899999999999999999952 11999999999999995  47789


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcc
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAM  248 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  248 (331)
                      ||+|||+++...           .......+|+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       201 kL~DFG~a~~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          201 KIVDFGSSCQLG-----------QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             EECCCTTCEETT-----------CCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             EEEeccCceecc-----------cccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            999999998651           1122456889999999999999999999999999999999999999864


No 218
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=5.9e-44  Score=317.26  Aligned_cols=254  Identities=22%  Similarity=0.298  Sum_probs=197.1

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHHH-HHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECNA-LRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+..|..+ ++.++||||+++++++.     ..+
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~-----~~~  123 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG  123 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEE-----CSS
T ss_pred             ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEE-----eCC
Confidence            3568999999999999999999999899999999996542 2333445556665 67789999999999954     346


Q ss_pred             eeeEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ..++|||+++ ++|.+++..  .....+++..++.++.|++.||.|||++.  +++|+||||+||+++.++.+||+|||+
T Consensus       124 ~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  200 (340)
T 3an0_A          124 DVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGI  200 (340)
T ss_dssp             CEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred             cEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCC
Confidence            7899999995 599998875  24456788999999999999999999742  899999999999999999999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCC----CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG----SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      +.....         ........||+.|+|||++.+    ..++.++||||||+++|+|++|..||..............
T Consensus       201 ~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~  271 (340)
T 3an0_A          201 SGYLVD---------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV  271 (340)
T ss_dssp             HHHHSC---------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred             ceeccc---------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHh
Confidence            987521         111222458999999999643    4789999999999999999999999975322222222211


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...         .+...          ...++..+.+|+.+||+.||++|||+.+|++
T Consensus       272 ~~~---------~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          272 EEP---------SPQLP----------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HSC---------CCCCC----------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCC---------CCCCC----------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            111         01110          1124567899999999999999999999986


No 219
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=2.3e-44  Score=312.85  Aligned_cols=265  Identities=25%  Similarity=0.322  Sum_probs=196.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecC-CC--ceEEEEEeecc---chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDE-SR--SIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFE  102 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  102 (331)
                      .++|.+.+.||+|+||+||+|.+.. ++  ..||+|++...   .....+.+.+|+.+++.++||||+++++++..    
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----   92 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----   92 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence            4579999999999999999998643 33  36899988643   33455778999999999999999999998642    


Q ss_pred             CcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          103 GFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                       . ..++|+|++++++|.+++.... ..+++..+..++.|++.||.+||++   +++|+||||+||+++.++.++|+|||
T Consensus        93 -~-~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg  166 (291)
T 1u46_A           93 -P-PMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG  166 (291)
T ss_dssp             -S-SCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             -C-CceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccc
Confidence             2 3789999999999999997643 3467888999999999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHHHHh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      ++.......     ..........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......  ........
T Consensus       167 ~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~  239 (291)
T 1u46_A          167 LMRALPQND-----DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDK  239 (291)
T ss_dssp             TCEECCC-C-----CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT
T ss_pred             ccccccccc-----cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHc
Confidence            998752211     11112223456778999999988889999999999999999999 99999754211  11111110


Q ss_pred             hCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhhc
Q 046639          262 ALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFLG  328 (331)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~~  328 (331)
                      ...       ..           .....++..+.+++.+||+.||.+|||+.++++.|+++...-..
T Consensus       240 ~~~-------~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  288 (291)
T 1u46_A          240 EGE-------RL-----------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR  288 (291)
T ss_dssp             SCC-------CC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred             cCC-------CC-----------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence            000       00           01123556789999999999999999999999999988765443


No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=4.8e-44  Score=321.53  Aligned_cols=260  Identities=10%  Similarity=0.014  Sum_probs=181.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcC--CCCCcceeecee-------
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI--RHRNLIKIITIC-------   96 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~h~~i~~~~~~~-------   96 (331)
                      ..+|.+.+.||+|+||+||+|.+..+++.||+|++....   ......+.+|+.+++.+  +||||++++..+       
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            346999999999999999999999999999999997643   23345677775444444  699988855332       


Q ss_pred             ecccC------------CCcceeeEEEeecCCCCHHHHHHhccCCccchHHH------HHHHHHHHHHHHHHhhcCCCCe
Q 046639           97 SSIDF------------EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR------VNIAIDVSFAIEYFHHHCQPSI  158 (331)
Q Consensus        97 ~~~~~------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~------~~~~~~i~~~l~~LH~~~~~~i  158 (331)
                      .....            ......++||||++ ++|.+++...... +.....      ..++.|++.||+|||++   +|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i  215 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV-YVFRGDEGILALHILTAQLIRLAANLQSK---GL  215 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc-cchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence            11100            01145899999997 8999999874322 233444      57779999999999999   99


Q ss_pred             eecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC--CCCccchhhHhHHHHHH
Q 046639          159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG--SKASVSGDVYNFGILLL  236 (331)
Q Consensus       159 vH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~  236 (331)
                      +||||||+||+++.++.+||+|||+++...           .......+|+.|+|||++.+  ..++.++||||||+++|
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~  284 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVG-----------TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIY  284 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETT-----------CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHH
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecC-----------CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHH
Confidence            999999999999999999999999998641           11113456789999999987  67999999999999999


Q ss_pred             HHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          237 EMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       237 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                      +|++|..||............      .............       ......++..+.+|+.+||+.||++|||+.+++
T Consensus       285 elltg~~Pf~~~~~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  351 (371)
T 3q60_A          285 RVWCLFLPFGLVTPGIKGSWK------RPSLRVPGTDSLA-------FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM  351 (371)
T ss_dssp             HHHHSSCSTTBCCTTCTTCCC------BCCTTSCCCCSCC-------CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHT
T ss_pred             HHHhCCCCCCCcCcccccchh------hhhhhhccccccc-------hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            999999999865332110000      0000000000000       011124567899999999999999999999997


Q ss_pred             H
Q 046639          317 A  317 (331)
Q Consensus       317 ~  317 (331)
                      +
T Consensus       352 ~  352 (371)
T 3q60_A          352 E  352 (371)
T ss_dssp             T
T ss_pred             c
Confidence            4


No 221
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=4.6e-43  Score=313.85  Aligned_cols=282  Identities=19%  Similarity=0.204  Sum_probs=195.2

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeeccc
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSID  100 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  100 (331)
                      +........++|.+.+.||+|+||+||+|.+..+++.||||++... .........++..++.++||||+++++++....
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             SSHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             hhhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            3455667788999999999999999999999999999999988543 233345667888888899999999999986543


Q ss_pred             C--CCcceeeEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHh--hcCCCCeeecCCCCCCEEecC-C
Q 046639          101 F--EGFDFKAIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFH--HHCQPSIVHGDLKPSNILLDQ-D  173 (331)
Q Consensus       101 ~--~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH--~~~~~~ivH~dik~~nilv~~-~  173 (331)
                      .  ......++|||++++ +|.+.+..  .....++...+..++.|++.||.+||  +.   +|+|+||||+||+++. +
T Consensus        93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~  168 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD  168 (360)
T ss_dssp             SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred             cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence            2  223347899999954 66655543  33445777888999999999999999  88   9999999999999996 8


Q ss_pred             CcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCC-CccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          174 IVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                      +.+||+|||++.....         ........||+.|+|||++.+.. ++.++||||||+++|+|++|..||..... .
T Consensus       169 ~~~kl~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~  238 (360)
T 3e3p_A          169 GTLKLCDFGSAKKLSP---------SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-A  238 (360)
T ss_dssp             TEEEECCCTTCBCCCT---------TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-H
T ss_pred             CcEEEeeCCCceecCC---------CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-H
Confidence            9999999999986521         11222345789999999987654 89999999999999999999999976422 1


Q ss_pred             chHHHHHHhhC--cchhhhhcCcccc-cccc-cCC-------cchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          253 LTLHEFVKMAL--PDKVMEIVDPSLL-LEVT-ANN-------YSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       253 ~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~-~~~-------~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ...........  +.......++... .... ...       ......+...+.+|+.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            22222222111  1111111111000 0000 000       0111125678999999999999999999999985


No 222
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.2e-43  Score=323.81  Aligned_cols=270  Identities=21%  Similarity=0.271  Sum_probs=198.2

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccC-CCcceee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDF-EGFDFKA  108 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~~~~~~  108 (331)
                      .+|.+.+.||+|+||+||+|++..+++.||||++.....    ...+|+.+++.++||||+++++++..... .+...++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            369999999999999999999999999999999864322    23469999999999999999998754321 2344578


Q ss_pred             EEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC-CcEEEcccCccc
Q 046639          109 IVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD-IVAHVGDLGLAK  185 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~-~~~kl~Dfg~a~  185 (331)
                      +||||++ ++|.+.+..  .....+++..+..++.|++.||.|||++   +|+||||||+||+++.+ +.+||+|||+++
T Consensus       130 lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            9999995 577777654  3345678888999999999999999999   99999999999999965 578999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALP  264 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  264 (331)
                      ....         ........+|+.|+|||++.+. .++.++|||||||++|||++|..||.+... ...+..+......
T Consensus       206 ~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~  275 (420)
T 1j1b_A          206 QLVR---------GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGT  275 (420)
T ss_dssp             ECCT---------TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCS
T ss_pred             hccc---------CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC
Confidence            6521         1122345689999999998765 689999999999999999999999976422 1222232221111


Q ss_pred             ch--hhhhcCcccc----cccccCCc--chHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          265 DK--VMEIVDPSLL----LEVTANNY--SWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       265 ~~--~~~~~~~~~~----~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..  .....++...    ..+....+  .+....+..+.+|+.+||+.||.+|||+.++++
T Consensus       276 p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            00  0000111100    00000000  011234578999999999999999999999974


No 223
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=6.3e-44  Score=316.48  Aligned_cols=259  Identities=18%  Similarity=0.213  Sum_probs=178.4

Q ss_pred             HHhcCCCcCc-eeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           27 KATNNFSPAN-KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        27 ~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ...++|.+.+ .||+|+||+||+|.+..+++.||+|++.... ...   ......++.+.||||+++++++... .....
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~---~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~   99 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KAR---QEVDHHWQASGGPHIVCILDVYENM-HHGKR   99 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHH---HHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHH---HHHHHHHHhcCCCChHHHHHHHhhc-cCCCc
Confidence            4556899965 6999999999999999999999999986432 211   2223345667899999999997543 23355


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CCcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DIVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~~~kl~Dfg  182 (331)
                      ..++|||++++++|.+++.......+++..++.++.|++.||.|||++   +++|+||||+||+++.   ++.+||+|||
T Consensus       100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A          100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence            689999999999999999887666788999999999999999999999   9999999999999976   4569999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++....          ........+|+.|+|||++.+..++.++||||||+++|+|++|..||...........  ....
T Consensus       177 ~~~~~~----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~  244 (336)
T 3fhr_A          177 FAKETT----------QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRR  244 (336)
T ss_dssp             TCEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred             cceecc----------ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHh
Confidence            997642          1122344578999999999888999999999999999999999999975432211100  0000


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..........            .....++..+.+|+.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~~~~~------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          245 IRLGQYGFPN------------PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ------CCCT------------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhccccccCc------------hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            0000000000            011234567899999999999999999999987


No 224
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3.8e-44  Score=319.37  Aligned_cols=267  Identities=18%  Similarity=0.231  Sum_probs=202.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhh-----------------HHHHHHHHHHHHcCCCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA-----------------SRSFAAECNALRNIRHRNLIK   91 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~i~~   91 (331)
                      .++|.+.+.||+|+||.||+|.+  +++.||+|.+.......                 ...+.+|+.+++.++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999999  79999999986442211                 167899999999999999999


Q ss_pred             eeceeecccCCCcceeeEEEeecCCCCHHHH------HHhccCCccchHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCC
Q 046639           92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQW------LRQSNGQLRFLTQRVNIAIDVSFAIEYFHH-HCQPSIVHGDLK  164 (331)
Q Consensus        92 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~~~~ivH~dik  164 (331)
                      +++++.     ..+..++|||++++++|.++      +.......+++..++.++.|++.||.+||+ .   +++|+||+
T Consensus       108 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~  179 (348)
T 2pml_X          108 CEGIIT-----NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVK  179 (348)
T ss_dssp             CSEEEE-----SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCC
T ss_pred             EEEEEe-----eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCC
Confidence            999953     45678999999999999998      655445678889999999999999999999 8   99999999


Q ss_pred             CCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-CCcc-chhhHhHHHHHHHHHhCC
Q 046639          165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASV-SGDVYNFGILLLEMFTRR  242 (331)
Q Consensus       165 ~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~-~~DiwslG~il~el~~g~  242 (331)
                      |+||+++.++.++|+|||++.....          .......+++.|+|||++.+. .++. ++||||||+++|+|++|.
T Consensus       180 p~Nil~~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  249 (348)
T 2pml_X          180 PSNILMDKNGRVKLSDFGESEYMVD----------KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV  249 (348)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECBT----------TEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred             hHhEEEcCCCcEEEecccccccccc----------ccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence            9999999999999999999986521          122345688999999999887 6666 999999999999999999


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .||......................  ....................++..+.+|+.+||+.||.+|||+.++++
T Consensus       250 ~pf~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          250 VPFSLKISLVELFNNIRTKNIEYPL--DRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CSSCCSSCSHHHHHHHTSCCCCCCC--SSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCcHHHHHHHHhccCcCCcc--chhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9997643322212111111110000  000000000000001111345678899999999999999999999986


No 225
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.4e-43  Score=312.75  Aligned_cols=267  Identities=18%  Similarity=0.221  Sum_probs=202.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeee-cCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCC------CcceeeceeecccC
Q 046639           29 TNNFSPANKIGQGGVSIVYKGIL-DESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR------NLIKIITICSSIDF  101 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~  101 (331)
                      .++|.+.+.||+|+||+||+|.+ ..+++.||+|++... ......+.+|+.+++.++|+      +++++++++     
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~-----   86 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF-----   86 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence            46899999999999999999998 567899999999643 34456788899999988655      488888885     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---------
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---------  172 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---------  172 (331)
                      ...+..++|||++ +++|.+++.......+++..+..++.|++.||.|||++   +++|+||||+||+++.         
T Consensus        87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence            4456889999999 99999999887666678899999999999999999999   9999999999999987         


Q ss_pred             ----------CCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCC
Q 046639          173 ----------DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRR  242 (331)
Q Consensus       173 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  242 (331)
                                ++.+||+|||++....           .......||+.|+|||++.+..++.++||||||+++|+|++|.
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  231 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDD-----------EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF  231 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETT-----------SCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccCCCceEeeCcccccCc-----------cccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence                      6689999999997641           1122346899999999999999999999999999999999999


Q ss_pred             CCCCcccCCcchHHHHHH--hhCcchhhhhcCcccc--------c-------------ccccCCcchHHHHHHHHHHhhc
Q 046639          243 RPTDAMFNEGLTLHEFVK--MALPDKVMEIVDPSLL--------L-------------EVTANNYSWIEDCLVAVIGTGV  299 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~-------------~~~~~~~~~~~~~~~~l~~l~~  299 (331)
                      .||....... .......  ...+............        .             ............+...+.+|+.
T Consensus       232 ~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  310 (339)
T 1z57_A          232 TVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ  310 (339)
T ss_dssp             CSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred             CCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHH
Confidence            9997542211 1111111  1111111000000000        0             0000000112356788999999


Q ss_pred             cccCCCCCCCCcHHHHHH
Q 046639          300 TCSMESPMERMEMRDVVA  317 (331)
Q Consensus       300 ~cl~~~P~~Rps~~~i~~  317 (331)
                      +||+.||.+|||+.|+++
T Consensus       311 ~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          311 KMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHTCSSTTTSCCHHHHTT
T ss_pred             HHhCcCcccccCHHHHhc
Confidence            999999999999999984


No 226
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=310.50  Aligned_cols=276  Identities=18%  Similarity=0.287  Sum_probs=199.1

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeeccc--------
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSID--------  100 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------  100 (331)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|.+...+....+.+.+|+.+++.++||||+++++++....        
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            468999999999999999999999999999999998777777788999999999999999999999864321        


Q ss_pred             -CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec-CCCcEEE
Q 046639          101 -FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD-QDIVAHV  178 (331)
Q Consensus       101 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~-~~~~~kl  178 (331)
                       +......++|||+++ ++|.+++...   .++...++.++.|++.||.+||++   +++|+||||+||+++ .++.+||
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence             234567899999995 6999998642   467788999999999999999999   999999999999997 5679999


Q ss_pred             cccCcccccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHH
Q 046639          179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHE  257 (331)
Q Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  257 (331)
                      +|||++.......     ..........+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...... .....
T Consensus       163 ~Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~  236 (320)
T 2i6l_A          163 GDFGLARIMDPHY-----SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQL  236 (320)
T ss_dssp             CCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred             ccCccccccCCCc-----ccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence            9999998652111     11112233457888999998765 67899999999999999999999999764221 11111


Q ss_pred             HHHhhCcch------hhhhcCcccccccc---cCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          258 FVKMALPDK------VMEIVDPSLLLEVT---ANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       258 ~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .........      ..............   .........++..+.+++.+||+.||++|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            111110000      00000000000000   0000112235678999999999999999999999975


No 227
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=9.9e-44  Score=319.44  Aligned_cols=270  Identities=16%  Similarity=0.193  Sum_probs=199.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccC-CCc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDF-EGF  104 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~~  104 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++...+. ...
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            346899999999999999999999999999999999643  33445778899999999999999999999754321 112


Q ss_pred             ceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          105 DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ...++|||++ .++|.+++..    .+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++
T Consensus       120 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          120 YDFYLVMPFM-QTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCCEEEEECC-CEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eeEEEEEccc-cccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence            2348999999 4788888732    377889999999999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      ....           .......+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...... ...........
T Consensus       192 ~~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~  259 (371)
T 4exu_A          192 RHAD-----------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTG  259 (371)
T ss_dssp             -------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHC
T ss_pred             cccc-----------cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhC
Confidence            7641           11223457899999999887 67899999999999999999999999754211 11222211111


Q ss_pred             c--chhhhhcCcc--------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 P--DKVMEIVDPS--------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~--~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .  ..........        ...............+...+.+|+.+||+.||++|||+.++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            0  0000000000        0000000001112234678999999999999999999999975


No 228
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.9e-44  Score=318.99  Aligned_cols=255  Identities=19%  Similarity=0.272  Sum_probs=198.5

Q ss_pred             hcCCCcCceeeccCeeEEEEeeec---CCCceEEEEEeeccc----hhhHHHHHHHHHHHHcC-CCCCcceeeceeeccc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILD---ESRSIVAVKVVNLKQ----KEASRSFAAECNALRNI-RHRNLIKIITICSSID  100 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  100 (331)
                      .++|.+.+.||+|+||+||+|++.   .+++.||||+++...    ......+.+|+.+++.+ .||||+++++++    
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF----  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence            358999999999999999999984   478999999986432    22334567899999999 699999999985    


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcc
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGD  180 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~D  180 (331)
                       ......++||||+++++|.+++....  .++...+..++.|++.||.|||++   +|+|+||||+||+++.++.+||+|
T Consensus       129 -~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D  202 (355)
T 1vzo_A          129 -QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD  202 (355)
T ss_dssp             -EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESC
T ss_pred             -eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEee
Confidence             34567899999999999999997644  477888999999999999999999   999999999999999999999999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCCC--CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS--KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      ||+++....       ..........||+.|+|||++.+.  .++.++||||||+++|+|++|..||........ ....
T Consensus       203 fG~a~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~  274 (355)
T 1vzo_A          203 FGLSKEFVA-------DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEI  274 (355)
T ss_dssp             SSEEEECCG-------GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHH
T ss_pred             CCCCeeccc-------CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHH
Confidence            999986521       111223345689999999999863  478999999999999999999999975432221 1121


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-----cHHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-----EMRDVVAK  318 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~i~~~  318 (331)
                      ......      ..+           .+...+...+.+|+.+||+.||.+||     |+.++++.
T Consensus       275 ~~~~~~------~~~-----------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          275 SRRILK------SEP-----------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHH------CCC-----------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHhc------cCC-----------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            111100      000           11123456788999999999999999     89998753


No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=3.3e-43  Score=307.04  Aligned_cols=265  Identities=21%  Similarity=0.246  Sum_probs=195.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeeccc-------
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSID-------  100 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------  100 (331)
                      ..++|.+.+.||+|+||+||+|++..+++.||+|++... ......+.+|+.+++.++||||+++++++....       
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            345799999999999999999999989999999999643 445577899999999999999999999875421       


Q ss_pred             -CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          101 -FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       101 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                       .......++|||++++++|.+++.... ..++...++.++.|++.||.+||++   +++|+||||+||+++.++.++|+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence             133567899999999999999997643 3456788889999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCC------cccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCc
Q 046639          180 DLGLAKFLFGYEPGT------AAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEG  252 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~------~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  252 (331)
                      |||++..........      ............+|+.|+|||++.+. .++.++||||||+++|+|++   ||.....  
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--  233 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--  233 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh--
Confidence            999997653211000      00011223345688999999998865 68999999999999999998   5542111  


Q ss_pred             chHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          253 LTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                        ..........      .......       .+...++..+.+++.+||+.||.+|||+.++++
T Consensus       234 --~~~~~~~~~~------~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          234 --RVNILKKLRS------VSIEFPP-------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             --HHHHHHHHHS------TTCCCCT-------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --HHHHHHhccc------cccccCc-------cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence              1111111000      0000000       122344567889999999999999999999985


No 230
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.9e-43  Score=317.76  Aligned_cols=273  Identities=19%  Similarity=0.294  Sum_probs=204.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-----------CCCcceeeceee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-----------HRNLIKIITICS   97 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~   97 (331)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++... ......+.+|+.+++.+.           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46899999999999999999999999999999999643 334566788999998876           889999999875


Q ss_pred             cccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec------
Q 046639           98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD------  171 (331)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~------  171 (331)
                      ... ......++|||++ +++|.+++.......+++..+..++.|++.||.|||++.  +|+|+||||+||+++      
T Consensus        97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEE-TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred             ccC-CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence            432 2334789999999 999999998866666888999999999999999999943  899999999999994      


Q ss_pred             CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCC
Q 046639          172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE  251 (331)
Q Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  251 (331)
                      ..+.+||+|||++.....           ......+|+.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus       173 ~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  241 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH  241 (373)
T ss_dssp             TEEEEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             CcceEEEcccccccccCC-----------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccc
Confidence            444899999999976521           122345899999999999999999999999999999999999999764322


Q ss_pred             cc-----hHHHHHHhh--Ccchhhh-------hcC-cccc-----------cccccCCcchHHHHHHHHHHhhccccCCC
Q 046639          252 GL-----TLHEFVKMA--LPDKVME-------IVD-PSLL-----------LEVTANNYSWIEDCLVAVIGTGVTCSMES  305 (331)
Q Consensus       252 ~~-----~~~~~~~~~--~~~~~~~-------~~~-~~~~-----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~  305 (331)
                      ..     .........  .+.....       ..+ ....           .........+...+...+.+|+.+||+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  321 (373)
T 1q8y_A          242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD  321 (373)
T ss_dssp             ---CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSS
T ss_pred             ccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccC
Confidence            11     111111110  1110000       000 0000           01111122344678889999999999999


Q ss_pred             CCCCCcHHHHHH
Q 046639          306 PMERMEMRDVVA  317 (331)
Q Consensus       306 P~~Rps~~~i~~  317 (331)
                      |++|||+.++++
T Consensus       322 P~~Rpt~~ell~  333 (373)
T 1q8y_A          322 PRKRADAGGLVN  333 (373)
T ss_dssp             TTTCBCHHHHHT
T ss_pred             ccccCCHHHHhh
Confidence            999999999985


No 231
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=5.2e-43  Score=317.03  Aligned_cols=270  Identities=20%  Similarity=0.251  Sum_probs=195.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccC-CCccee
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDF-EGFDFK  107 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~~~~~  107 (331)
                      ..+|.+.+.||+|+||+||+|++..++. +|+|.+......    ..+|+.+++.++||||+++++++..... ......
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence            4579999999999999999999987766 888877533221    2369999999999999999999765432 344557


Q ss_pred             eEEEeecCCCCHHHHHHh--ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec-CCCcEEEcccCcc
Q 046639          108 AIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD-QDIVAHVGDLGLA  184 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~-~~~~~kl~Dfg~a  184 (331)
                      ++||||+++ ++.+.+..  .....+++..+..++.|++.||.|||++   +|+||||||+||+++ .++.+||+|||++
T Consensus       114 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          114 NLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            899999965 55544432  2344577889999999999999999999   999999999999999 7999999999999


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL  263 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  263 (331)
                      +....         ........+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+.... ..+........
T Consensus       190 ~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g  259 (394)
T 4e7w_A          190 KILIA---------GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLG  259 (394)
T ss_dssp             EECCT---------TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred             ccccC---------CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence            87521         1222345689999999998765 5899999999999999999999999764221 12222222111


Q ss_pred             cc--hhhhhcCcccc----cccccCC--cchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 PD--KVMEIVDPSLL----LEVTANN--YSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 ~~--~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..  ......++...    .......  ..+...+++.+.+|+.+||+.||.+|||+.++++
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          260 TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             CCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            10  00000011000    0000000  0111235678999999999999999999999985


No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=8.3e-44  Score=323.64  Aligned_cols=205  Identities=21%  Similarity=0.285  Sum_probs=156.2

Q ss_pred             cCCCc-CceeeccCeeEEEEeeec--CCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           30 NNFSP-ANKIGQGGVSIVYKGILD--ESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      +.|.+ +++||+|+||+||+|++.  .+++.||+|++....  ....+.+|+.+++.++||||+++++++..   .....
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~   94 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRK   94 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence            34666 568999999999999965  578899999986432  23467899999999999999999999643   34567


Q ss_pred             eeEEEeecCCCCHHHHHHhcc-------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe----cCCCc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSN-------GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL----DQDIV  175 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv----~~~~~  175 (331)
                      .++||||+ +++|.+++....       ...+++..++.++.|++.||.|||+.   +|+||||||+||++    +.++.
T Consensus        95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred             EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence            89999999 568988886421       22377888999999999999999999   99999999999999    67789


Q ss_pred             EEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCC-CCccchhhHhHHHHHHHHHhCCCCCCcc
Q 046639          176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAM  248 (331)
Q Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~  248 (331)
                      +||+|||+++......     ..........||+.|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus       171 ~kl~Dfg~a~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          171 VKIADMGFARLFNSPL-----KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             EEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             EEEEECCCceecCCCC-----cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            9999999998752211     111223346689999999998874 5899999999999999999999999754


No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=8.4e-43  Score=302.57  Aligned_cols=253  Identities=22%  Similarity=0.232  Sum_probs=201.1

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ....++|.+.+.||+|+||+||+|.+..+++.||+|++....  ......+.+|+.++++++||||+++++++     ..
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~   92 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----ED   92 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----EC
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eC
Confidence            445668999999999999999999999899999999986442  23456788999999999999999999995     34


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC---CcEEEcc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD---IVAHVGD  180 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~---~~~kl~D  180 (331)
                      ....++|||++++++|.+++....  .++...++.++.|++.||.+||++   +++|+||+|+||+++.+   +.+||+|
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~D  167 (287)
T 2wei_A           93 SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID  167 (287)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred             CCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEec
Confidence            567899999999999999987643  477889999999999999999999   99999999999999754   4799999


Q ss_pred             cCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH-
Q 046639          181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV-  259 (331)
Q Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-  259 (331)
                      ||++.....         ........+++.|+|||++.+ .++.++||||||+++|+|++|..||.....  ......+ 
T Consensus       168 fg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~  235 (287)
T 2wei_A          168 FGLSTCFQQ---------NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVE  235 (287)
T ss_dssp             TTGGGTBCC---------CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred             cCcceeecC---------CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence            999976521         112223458889999999876 489999999999999999999999975321  1111111 


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ......      +           ......++..+.+++.+||+.||++|||+.++++
T Consensus       236 ~~~~~~------~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          236 TGKYAF------D-----------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HCCCCC------C-----------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCC------C-----------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            111000      0           0011234567899999999999999999999987


No 234
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.3e-42  Score=308.46  Aligned_cols=268  Identities=19%  Similarity=0.256  Sum_probs=200.2

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCC-ceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC------cceeeceeeccc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESR-SIVAVKVVNLKQKEASRSFAAECNALRNIRHRN------LIKIITICSSID  100 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~  100 (331)
                      ..++|.+.+.||+|+||+||+|.+..++ +.||+|++... ......+..|+.+++.+.|++      ++.+.+++    
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~----   91 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF----   91 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE----
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee----
Confidence            3568999999999999999999997766 78999999643 344567888999999987655      77777774    


Q ss_pred             CCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEe----------
Q 046639          101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL----------  170 (331)
Q Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv----------  170 (331)
                       ...+..++|||++ +++|.+.+.......+++..+..++.|++.||.|||++   +|+|+||||+||++          
T Consensus        92 -~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~  166 (355)
T 2eu9_A           92 -NFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYN  166 (355)
T ss_dssp             -EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEEC
T ss_pred             -eeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccc
Confidence             4456789999999 78888888776656688899999999999999999999   99999999999999          


Q ss_pred             ---------cCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhC
Q 046639          171 ---------DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR  241 (331)
Q Consensus       171 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  241 (331)
                               +.++.+||+|||++....           .......||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g  235 (355)
T 2eu9_A          167 EHKSCEEKSVKNTSIRVADFGSATFDH-----------EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG  235 (355)
T ss_dssp             CC-CCCEEEESCCCEEECCCTTCEETT-----------SCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccCCCcEEEeecCcccccc-----------ccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhC
Confidence                     567899999999997641           112234689999999999999999999999999999999999


Q ss_pred             CCCCCcccCCcchHHHHHHh--hCcchhhhhcCcc-cc-------cc-------------cccCCcchHHHHHHHHHHhh
Q 046639          242 RRPTDAMFNEGLTLHEFVKM--ALPDKVMEIVDPS-LL-------LE-------------VTANNYSWIEDCLVAVIGTG  298 (331)
Q Consensus       242 ~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~-------~~-------------~~~~~~~~~~~~~~~l~~l~  298 (331)
                      ..||....... ........  ..+.......... ..       ..             ...............+.+|+
T Consensus       236 ~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  314 (355)
T 2eu9_A          236 FTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLM  314 (355)
T ss_dssp             SCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred             CCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHH
Confidence            99997542211 11111111  1111111000000 00       00             00000011123466899999


Q ss_pred             ccccCCCCCCCCcHHHHHH
Q 046639          299 VTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       299 ~~cl~~~P~~Rps~~~i~~  317 (331)
                      .+||+.||++|||+.++++
T Consensus       315 ~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          315 RRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHTCSSTTTSCCHHHHTT
T ss_pred             HHHhcCChhhCcCHHHHhc
Confidence            9999999999999999974


No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=6.9e-43  Score=311.96  Aligned_cols=269  Identities=17%  Similarity=0.199  Sum_probs=199.1

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCCCCCcceeeceeecccC-CCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITICSSIDF-EGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~~~  105 (331)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++...  .......+.+|+.+++.++||||+++++++..... ....
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46899999999999999999999999999999998643  33345678899999999999999999999753211 1123


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++|||++. ++|.+++..    .+++..+..++.|++.||.|||++   +++|+||||+||+++.++.+||+|||++.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             eEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence            4589999995 688887742    377889999999999999999999   99999999999999999999999999987


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCC-CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhC-
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMAL-  263 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-  263 (331)
                      ...           .......+|+.|+|||++.+ ..++.++||||||+++|+|++|..||...... ..+........ 
T Consensus       175 ~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~  242 (353)
T 3coi_A          175 HAD-----------AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGV  242 (353)
T ss_dssp             C-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCB
T ss_pred             CCC-----------CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence            541           11223467899999999887 67899999999999999999999999764221 11222211110 


Q ss_pred             -cchhhhhcCcc--------cccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          264 -PDKVMEIVDPS--------LLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       264 -~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                       +..........        +..............++..+.+|+.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             00000000000        0000001111222345678999999999999999999999974


No 236
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.5e-43  Score=334.57  Aligned_cols=264  Identities=19%  Similarity=0.276  Sum_probs=206.2

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEeeecCC---CceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecc
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGILDES---RSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSI   99 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   99 (331)
                      +.....++|.+.+.||+|+||+||+|.+..+   +..||+|.+... .....+.+.+|+.+++.++||||+++++++.  
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--  461 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--  461 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--
Confidence            3334456899999999999999999998643   457999988643 3344577899999999999999999999863  


Q ss_pred             cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEc
Q 046639          100 DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG  179 (331)
Q Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~  179 (331)
                          .+..++|||++++++|.+++.... ..+++..++.++.|++.||.|||++   +|+||||||+||+++.++.+||+
T Consensus       462 ----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~  533 (656)
T 2j0j_A          462 ----ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG  533 (656)
T ss_dssp             ----SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred             ----cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence                245799999999999999997643 3467888999999999999999999   99999999999999999999999


Q ss_pred             ccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHHH
Q 046639          180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       180 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~  258 (331)
                      |||++.......       ........+++.|+|||++.+..++.++||||||+++|||++ |..||......  .....
T Consensus       534 DFG~a~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~  604 (656)
T 2j0j_A          534 DFGLSRYMEDST-------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGR  604 (656)
T ss_dssp             CCCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH
T ss_pred             ecCCCeecCCCc-------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH
Confidence            999998652111       111223346778999999988899999999999999999997 99999754221  11111


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhh
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARET  325 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~  325 (331)
                      +....        ..           ..+..++..+.+|+.+||+.||.+|||+.+|++.|+.+.+.
T Consensus       605 i~~~~--------~~-----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          605 IENGE--------RL-----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHTC--------CC-----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHcCC--------CC-----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            11100        00           11123567889999999999999999999999999998764


No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.1e-42  Score=307.51  Aligned_cols=257  Identities=20%  Similarity=0.230  Sum_probs=178.7

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc-hhhHHHHHHHHH-HHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ-KEASRSFAAECN-ALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+..|+. +++.++||||+++++++.     ..+
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~~   94 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----REG   94 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CSS
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eCC
Confidence            3468999999999999999999999999999999997543 233345556666 677789999999999954     346


Q ss_pred             eeeEEEeecCCCCHHHHHHh---ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQ---SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg  182 (331)
                      ..++|||+++ ++|.+++..   .....++...+..++.|++.||.+||+..  +++|+||||+||+++.++.+||+|||
T Consensus        95 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg  171 (327)
T 3aln_A           95 DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG  171 (327)
T ss_dssp             EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred             ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence            7899999995 588888764   22455778889999999999999999853  89999999999999999999999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCccc----CCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHH
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG----MGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF  258 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  258 (331)
                      ++.....         ........||+.|+|||++    .+..++.++||||||+++|+|++|..||........    .
T Consensus       172 ~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~  238 (327)
T 3aln_A          172 ISGQLVD---------SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----Q  238 (327)
T ss_dssp             SSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred             Cceeccc---------ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----H
Confidence            9976521         1112233588999999998    456789999999999999999999999975321100    0


Q ss_pred             HHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          259 VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ..     .......+.+..       .....++..+.+|+.+||+.||++|||+.+|++
T Consensus       239 ~~-----~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          239 LT-----QVVKGDPPQLSN-------SEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -C-----CCCCSCCCCCCC-------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HH-----HHhcCCCCCCCC-------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            00     000000001100       011234567999999999999999999999976


No 238
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.2e-43  Score=310.03  Aligned_cols=259  Identities=25%  Similarity=0.372  Sum_probs=195.5

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc--chhhHHHHHHHHHHHHcCC--CCCcceeecee
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIR--HRNLIKIITIC   96 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~   96 (331)
                      ++..+....++|.+.+.||+|+||.||+|.+. +++.||+|++...  .......+.+|+.+++.++  |+||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             -CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            33444456778999999999999999999986 5888999998644  3445577899999999997  59999999985


Q ss_pred             ecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcE
Q 046639           97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA  176 (331)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~  176 (331)
                      .     .....++||| +.+++|.+++....  .+++..+..++.|++.||.+||++   +++|+||||+||+++ ++.+
T Consensus        98 ~-----~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~  165 (313)
T 3cek_A           98 I-----TDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML  165 (313)
T ss_dssp             E-----CSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred             e-----cCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeE
Confidence            3     4567899999 45899999997643  467788999999999999999999   999999999999996 4899


Q ss_pred             EEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC-----------CCCccchhhHhHHHHHHHHHhCCCCC
Q 046639          177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-----------SKASVSGDVYNFGILLLEMFTRRRPT  245 (331)
Q Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DiwslG~il~el~~g~~pf  245 (331)
                      ||+|||++.......      .........||+.|+|||++.+           ..++.++||||||+++|+|++|..||
T Consensus       166 kL~Dfg~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf  239 (313)
T 3cek_A          166 KLIDFGIANQMQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF  239 (313)
T ss_dssp             EECCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EEeeccccccccCcc------ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCch
Confidence            999999997652111      1112234468999999999875           46888999999999999999999999


Q ss_pred             CcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          246 DAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .............            .++.....       +...+...+.+++.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~------------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          240 QQIINQISKLHAI------------IDPNHEIE-------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             TTCCSHHHHHHHH------------HCTTSCCC-------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHHHHHHHHHHH------------HhcccccC-------CcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            7543221111111            11111111       11123457889999999999999999999985


No 239
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.7e-42  Score=304.80  Aligned_cols=253  Identities=19%  Similarity=0.221  Sum_probs=181.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch-hh-HHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EA-SRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++..... .. .+.+..+..+++.++||||+++++++.     ..+
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~   97 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNT   97 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCC
Confidence            34679999999999999999999998999999999975432 22 233445556788889999999999954     456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCEEecCCCcEEEcccCcc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH-HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA  184 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a  184 (331)
                      ..++|||++ ++.+..+.... ...+++..+..++.|++.||.|||+ .   +++|+||||+||+++.++.+||+|||++
T Consensus        98 ~~~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A           98 DVFIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             EEEEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             cEEEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            789999999 66666665432 3457788999999999999999998 6   8999999999999999999999999998


Q ss_pred             cccccCCCCCcccccCCceeecccccccCCcccC-----CCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHH
Q 046639          185 KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM-----GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV  259 (331)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  259 (331)
                      .....         ........+|+.|+|||++.     +..++.++||||||+++|+|++|..||..............
T Consensus       173 ~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  243 (318)
T 2dyl_A          173 GRLVD---------DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL  243 (318)
T ss_dssp             -----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred             hhccC---------CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh
Confidence            76521         11223345889999999984     45688999999999999999999999975432222222222


Q ss_pred             HhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          260 KMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ....+         ....         ...++..+.+++.+||+.||.+|||+.++++
T Consensus       244 ~~~~~---------~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          244 QEEPP---------LLPG---------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HSCCC---------CCCS---------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccCCC---------CCCc---------cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            11110         0000         0124567889999999999999999999986


No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.3e-43  Score=307.40  Aligned_cols=247  Identities=21%  Similarity=0.290  Sum_probs=190.6

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch------hhHHHHHHHHHHHHcC----CCCCccee
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK------EASRSFAAECNALRNI----RHRNLIKI   92 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~~i~~~   92 (331)
                      .+.....++|.+.+.||+|+||.||+|.+..+++.||+|++.....      .....+.+|+.+++++    +|+||+++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            3445667799999999999999999999998999999999964432      1223356788988888    89999999


Q ss_pred             eceeecccCCCcceeeEEEee-cCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec
Q 046639           93 ITICSSIDFEGFDFKAIVFEY-MQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD  171 (331)
Q Consensus        93 ~~~~~~~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~  171 (331)
                      ++++     ...+..++|+|+ +.+++|.+++....  .+++..++.++.|++.||.+||+.   +++|+||||+||+++
T Consensus       104 ~~~~-----~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  173 (312)
T 2iwi_A          104 LDWF-----ETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID  173 (312)
T ss_dssp             EEEC----------CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEE
T ss_pred             EEEE-----ecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEe
Confidence            9984     445678999999 78899999997644  377889999999999999999999   999999999999999


Q ss_pred             -CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCccc
Q 046639          172 -QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMF  249 (331)
Q Consensus       172 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~  249 (331)
                       .++.++|+|||++.....          .......+++.|+|||++.+..+ +.++||||||+++|+|++|..||....
T Consensus       174 ~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  243 (312)
T 2iwi_A          174 LRRGCAKLIDFGSGALLHD----------EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ  243 (312)
T ss_dssp             TTTTEEEECCCSSCEECCS----------SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred             CCCCeEEEEEcchhhhccc----------CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence             889999999999987521          11234458899999999877665 568999999999999999999996421


Q ss_pred             CCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          250 NEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                             .......                     .+...+...+.+++.+||+.||++|||+.++++
T Consensus       244 -------~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          244 -------EILEAEL---------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             -------HHHHTCC---------------------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -------HHhhhcc---------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                   1111000                     111234567889999999999999999999986


No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2.9e-43  Score=310.16  Aligned_cols=248  Identities=19%  Similarity=0.246  Sum_probs=197.4

Q ss_pred             HHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchh------hHHHHHHHHHHHHcCC--CCCcceee
Q 046639           22 YAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE------ASRSFAAECNALRNIR--HRNLIKII   93 (331)
Q Consensus        22 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~   93 (331)
                      ........++|.+.+.||+|+||+||+|.+..+++.||+|++......      ....+..|+.+++.+.  |+||++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             -----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            344456677999999999999999999999999999999999654221      2234667899999996  59999999


Q ss_pred             ceeecccCCCcceeeEEEeecCC-CCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEec-
Q 046639           94 TICSSIDFEGFDFKAIVFEYMQN-RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD-  171 (331)
Q Consensus        94 ~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~-  171 (331)
                      +++     ...+..++|+|++.+ ++|.+++....  .++...++.++.|++.||.|||+.   +++|+||||+||+++ 
T Consensus       115 ~~~-----~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~  184 (320)
T 3a99_A          115 DWF-----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDL  184 (320)
T ss_dssp             EEE-----ECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEET
T ss_pred             EEE-----ecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeC
Confidence            995     445678999999965 89999997643  467888999999999999999999   999999999999999 


Q ss_pred             CCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCC-ccchhhHhHHHHHHHHHhCCCCCCcccC
Q 046639          172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFN  250 (331)
Q Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~  250 (331)
                      .++.+||+|||++.....          .......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.... 
T Consensus       185 ~~~~~kL~Dfg~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-  253 (320)
T 3a99_A          185 NRGELKLIDFGSGALLKD----------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-  253 (320)
T ss_dssp             TTTEEEECCCTTCEECCS----------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-
T ss_pred             CCCCEEEeeCcccccccc----------ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-
Confidence            789999999999987521          12223458999999999877665 788999999999999999999996421 


Q ss_pred             CcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          251 EGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                            .......                     .+...++..+.+|+.+||+.||++|||+.+|++
T Consensus       254 ------~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          254 ------EIIRGQV---------------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             ------HHHHCCC---------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------hhhcccc---------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  1111100                     011123567889999999999999999999985


No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.9e-42  Score=326.89  Aligned_cols=280  Identities=21%  Similarity=0.241  Sum_probs=204.6

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeeccc-CCCcc
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSID-FEGFD  105 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~~  105 (331)
                      ..++|.+.+.||+|+||+||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++.... +...+
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            347899999999999999999999999999999998644 3445577899999999999999999999865422 23366


Q ss_pred             eeeEEEeecCCCCHHHHHHhcc-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCc---EEEccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSN-GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV---AHVGDL  181 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~---~kl~Df  181 (331)
                      ..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.   |++|+||||+||+++.++.   ++|+||
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence            7899999999999999998743 33577889999999999999999999   9999999999999997664   999999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHh
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM  261 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  261 (331)
                      |++.....         ........||+.|+|||++.+..++.++||||||+++|+|++|..||.....    ...+...
T Consensus       169 G~a~~~~~---------~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~  235 (676)
T 3qa8_A          169 GYAKELDQ---------GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGK  235 (676)
T ss_dssp             CCCCBTTS---------CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTT
T ss_pred             cccccccc---------ccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhh
Confidence            99986521         1122345689999999999999999999999999999999999999965311    0010000


Q ss_pred             hCc---c--hhhhhcCc-ccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHH-----HHHHHHHhh
Q 046639          262 ALP---D--KVMEIVDP-SLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRD-----VVAKLRHAR  323 (331)
Q Consensus       262 ~~~---~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~-----i~~~L~~~~  323 (331)
                      ...   .  ........ .......+.........+..+.+|+.+||+.||++|||+.+     +.+.++.+.
T Consensus       236 i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          236 VREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             CC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             hhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence            000   0  00000000 00011111122334457788999999999999999999988     444444443


No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=4.6e-43  Score=308.62  Aligned_cols=265  Identities=20%  Similarity=0.274  Sum_probs=197.0

Q ss_pred             HHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      ....++|.+.+.||+|+||.||+|.+..   .+|+|++....  ....+.+.+|+.+++.++||||+++++++.     .
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-----S  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-----C
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----c
Confidence            3446789999999999999999999863   48999986442  223345778999999999999999999964     3


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      ....++|||++++++|.+++.... ..+++..++.++.|++.||.+||+.   +++|+||||+||+++ ++.++|+|||+
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGL  175 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred             CCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCC
Confidence            456899999999999999997543 3577889999999999999999999   999999999999998 68999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCC---------CCCccchhhHhHHHHHHHHHhCCCCCCcccCCcch
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG---------SKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLT  254 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  254 (331)
                      +........   ...........|++.|+|||++.+         ..++.++||||||+++|+|++|..||......  .
T Consensus       176 ~~~~~~~~~---~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~  250 (319)
T 2y4i_B          176 FSISGVLQA---GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--A  250 (319)
T ss_dssp             CC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--H
T ss_pred             ccccccccc---cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H
Confidence            876421111   111122233458899999999864         45789999999999999999999999754221  1


Q ss_pred             HHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhh
Q 046639          255 LHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETF  326 (331)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~  326 (331)
                      ........        ..+....          ..++..+.+++.+||+.||.+|||+.+|++.|+.+.+..
T Consensus       251 ~~~~~~~~--------~~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          251 IIWQMGTG--------MKPNLSQ----------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HHHHHHTT--------CCCCCCC----------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             HHHHhccC--------CCCCCCc----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            11111111        1111100          013446889999999999999999999999999887654


No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3e-41  Score=292.45  Aligned_cols=236  Identities=10%  Similarity=0.043  Sum_probs=184.9

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc---hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcc
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.++..++||||+++++++.     ..+
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~  104 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-----TRA  104 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETT
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-----ECC
Confidence            368999999999999999999999999999999996442   344577899999999999999999999953     456


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..++||||+++++|.++++..    .....+..++.|++.||.|||++   ||+|+||||+||+++.+|.++|++++   
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~---  174 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA---  174 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---
T ss_pred             cEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---
Confidence            789999999999999999542    23456788999999999999999   99999999999999999999997443   


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcc
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPD  265 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  265 (331)
                                               |++       +++.++||||||+++|+|++|..||..........          
T Consensus       175 -------------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~----------  212 (286)
T 3uqc_A          175 -------------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA----------  212 (286)
T ss_dssp             -------------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE----------
T ss_pred             -------------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH----------
Confidence                                     222       36889999999999999999999998643221000          


Q ss_pred             hhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          266 KVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      .........     .........+++..+.+++.+||+.||.+| |+.++++.|+.+.....
T Consensus       213 ~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          213 PAERDTAGQ-----PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             ECCBCTTSC-----BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             HHHHHhccC-----CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            000000000     000001222456779999999999999999 99999999999876544


No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.2e-40  Score=290.70  Aligned_cols=237  Identities=17%  Similarity=0.234  Sum_probs=183.9

Q ss_pred             HhcCCCcC-ceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHH-HcCCCCCcceeeceeecccCCCcc
Q 046639           28 ATNNFSPA-NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNAL-RNIRHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        28 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..++|.+. +.||+|+||.||+|.+..+++.||+|++...     ....+|+.++ +...||||+++++++... .....
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~   88 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRK   88 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCc
Confidence            34568777 7899999999999999999999999998632     3456788887 556899999999987542 23466


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC---CCcEEEcccC
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ---DIVAHVGDLG  182 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~---~~~~kl~Dfg  182 (331)
                      ..++|||++++++|.+++.......+++..++.++.|++.||.|||+.   +++|+||||+||+++.   ++.++|+|||
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A           89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence            789999999999999999887666788999999999999999999999   9999999999999998   7899999999


Q ss_pred             cccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhh
Q 046639          183 LAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA  262 (331)
Q Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  262 (331)
                      ++...                              .+..++.++||||||+++|+|++|..||........      .  
T Consensus       166 ~a~~~------------------------------~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~--  207 (299)
T 3m2w_A          166 FAKET------------------------------TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------S--  207 (299)
T ss_dssp             TCEEC------------------------------TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------
T ss_pred             ccccc------------------------------ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------h--
Confidence            98653                              123567899999999999999999999965321100      0  


Q ss_pred             CcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          263 LPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                        .........    ............++..+.+++.+||+.||.+|||+.++++
T Consensus       208 --~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          208 --PGMKTRIRM----GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             --CCSCCSSCT----TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --HHHHHHHhh----ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence              000000000    0000000111345678999999999999999999999986


No 246
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=4.5e-41  Score=307.96  Aligned_cols=254  Identities=19%  Similarity=0.213  Sum_probs=183.3

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcceee
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      +.|.+.+.||+|+||+||.+. ..+++.||||.+....   ...+.+|+.+++.+ +||||+++++++     ......+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~   85 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLY   85 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEE
T ss_pred             heeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEE
Confidence            455667889999999998653 3478999999986432   34567899999876 899999999884     4457789


Q ss_pred             EEEeecCCCCHHHHHHhccCCcc-----chHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCC----------
Q 046639          109 IVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD----------  173 (331)
Q Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~-----~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~----------  173 (331)
                      +|||++ +++|.+++........     ....++.++.|++.||.|||++   +|+||||||+||+++.+          
T Consensus        86 lv~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           86 IALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             EEECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             EEEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence            999999 5699999986432211     2234567999999999999999   99999999999999754          


Q ss_pred             ---CcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCC-------CCCccchhhHhHHHHHHHHHh-CC
Q 046639          174 ---IVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-------SKASVSGDVYNFGILLLEMFT-RR  242 (331)
Q Consensus       174 ---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~DiwslG~il~el~~-g~  242 (331)
                         +.+||+|||++........    ..........||+.|+|||++.+       ..++.++|||||||++|+|++ |.
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~  237 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQS----SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK  237 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSC
T ss_pred             CCceEEEEcccccceecCCCCc----cceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCC
Confidence               4899999999987632111    01111234569999999999876       568999999999999999999 99


Q ss_pred             CCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          243 RPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       243 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      .||......   ............       ..       .......++..+.+|+.+||+.||.+|||+.+|++
T Consensus       238 ~Pf~~~~~~---~~~i~~~~~~~~-------~~-------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          238 HPFGDKYSR---ESNIIRGIFSLD-------EM-------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CTTCSTTTH---HHHHHHTCCCCC-------CC-------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCchhh---HHHHhcCCCCcc-------cc-------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            999653221   112221111100       00       00112356788999999999999999999999985


No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.8e-40  Score=303.27  Aligned_cols=252  Identities=20%  Similarity=0.235  Sum_probs=183.0

Q ss_pred             HhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcce
Q 046639           28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ...+|.+.+.||+|+||+|+. ....+++.||||++.....   ....+|+.+++.+ +||||+++++++     .....
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~   92 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTE-----KDRQF   92 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEE-----EETTE
T ss_pred             ccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCE
Confidence            345799999999999999654 3334788999999864322   2245799999999 799999999985     44567


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecC-----CCcEEEccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ-----DIVAHVGDL  181 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~-----~~~~kl~Df  181 (331)
                      .++|||++ +++|.+++...... .....+..++.|++.||.|||++   +|+||||||+||+++.     ...++|+||
T Consensus        93 ~~lv~E~~-~g~L~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DF  167 (432)
T 3p23_A           93 QYIAIELC-AATLQEYVEQKDFA-HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDF  167 (432)
T ss_dssp             EEEEEECC-SEEHHHHHHSSSCC-CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred             EEEEEECC-CCCHHHHHHhcCCC-ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence            89999999 56999999865432 33345678999999999999999   9999999999999953     235889999


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCC---CCCccchhhHhHHHHHHHHHh-CCCCCCcccCCcchHHH
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG---SKASVSGDVYNFGILLLEMFT-RRRPTDAMFNEGLTLHE  257 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~  257 (331)
                      |++.......     ..........||+.|+|||++.+   ..++.++|||||||++|+|++ |..||.....   ....
T Consensus       168 G~a~~~~~~~-----~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~~~~  239 (432)
T 3p23_A          168 GLCKKLAVGR-----HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---RQAN  239 (432)
T ss_dssp             TEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---HHHH
T ss_pred             cceeeccCCC-----cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---HHHH
Confidence            9998752211     11122234569999999999874   567889999999999999999 9999964321   1111


Q ss_pred             HHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCCcHHHHHH
Q 046639          258 FVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERMEMRDVVA  317 (331)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~~  317 (331)
                      ........   ...             .........+.+|+.+||+.||.+|||+.+|++
T Consensus       240 ~~~~~~~~---~~~-------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          240 ILLGACSL---DCL-------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHTTCCCC---TTS-------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhccCCc---ccc-------------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            11000000   000             111234566889999999999999999999983


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.8e-41  Score=307.41  Aligned_cols=247  Identities=15%  Similarity=0.131  Sum_probs=182.7

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch---hhHHHHHHHHHHHHcCCC-CCcceeece---------
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNALRNIRH-RNLIKIITI---------   95 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~~i~~~~~~---------   95 (331)
                      .++|...+.||+|+||+||+|.+..+++.||||++.....   ...+.+.+|+.+++.+.| +|...+..+         
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            4468888999999999999999999999999999873322   224678899999999977 322111111         


Q ss_pred             ee------------cccCCCcceeeEEEeecCCCCHHHHHHh-----ccCCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 046639           96 CS------------SIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSI  158 (331)
Q Consensus        96 ~~------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~i  158 (331)
                      +.            ..........+++|+.+ +++|.++++.     .....+++..++.++.|++.||.|||++   +|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence            00            00000122356777776 7899999862     2344577778889999999999999999   99


Q ss_pred             eecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCccc----------CCCCCccchhh
Q 046639          159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG----------MGSKASVSGDV  228 (331)
Q Consensus       159 vH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~----------~~~~~~~~~Di  228 (331)
                      +||||||+||+++.++.+||+|||+++....           ......| +.|+|||++          .+..++.++||
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv  300 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT  300 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCC-----------ccccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence            9999999999999999999999999876411           1223456 889999998          66668899999


Q ss_pred             HhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCC
Q 046639          229 YNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPME  308 (331)
Q Consensus       229 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~  308 (331)
                      ||||+++|+|++|..||........             ......         ..    ..++..+.+|+.+||+.||++
T Consensus       301 wSlGvil~elltg~~Pf~~~~~~~~-------------~~~~~~---------~~----~~~~~~~~~li~~~l~~dP~~  354 (413)
T 3dzo_A          301 WTLGLAIYWIWCADLPNTDDAALGG-------------SEWIFR---------SC----KNIPQPVRALLEGFLRYPKED  354 (413)
T ss_dssp             HHHHHHHHHHHHSSCCCCTTGGGSC-------------SGGGGS---------SC----CCCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHHHCCCCCCCcchhhh-------------HHHHHh---------hc----ccCCHHHHHHHHHHccCChhh
Confidence            9999999999999999975422110             000000         00    023467899999999999999


Q ss_pred             CCcHHHHHH
Q 046639          309 RMEMRDVVA  317 (331)
Q Consensus       309 Rps~~~i~~  317 (331)
                      |||+.++++
T Consensus       355 Rpt~~~~l~  363 (413)
T 3dzo_A          355 RLLPLQAME  363 (413)
T ss_dssp             SCCHHHHTT
T ss_pred             CcCHHHHHh
Confidence            999877754


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.2e-40  Score=319.55  Aligned_cols=247  Identities=21%  Similarity=0.269  Sum_probs=196.4

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecC-CCceEEEEEeecc-chhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDE-SRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .++|.+.+.||+|+||+||+|.+.. +++.||||++... .......+..|+.+++.++||||+++++++...+......
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            4789999999999999999999975 7899999988643 3344567889999999999999999999986544333334


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      .++||||+++++|.+++..    .+++..++.++.|++.||.|||++   +|+||||||+||+++.+ .+||+|||++..
T Consensus       159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence            6999999999999988754    478899999999999999999999   99999999999999975 899999999986


Q ss_pred             cccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCcccCCcchHHHHHHhhCcch
Q 046639          187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMALPDK  266 (331)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  266 (331)
                      ...            .....||+.|+|||++.+.. +.++||||||+++|+|++|..||........             
T Consensus       231 ~~~------------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------  284 (681)
T 2pzi_A          231 INS------------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------  284 (681)
T ss_dssp             TTC------------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-------------
T ss_pred             ccc------------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-------------
Confidence            521            13356899999999987654 8899999999999999999988864321110             


Q ss_pred             hhhhcCcccccccccCCcchHHHHHHHHHHhhccccCCCCCCCC-cHHHHHHHHHHhhh
Q 046639          267 VMEIVDPSLLLEVTANNYSWIEDCLVAVIGTGVTCSMESPMERM-EMRDVVAKLRHARE  324 (331)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-s~~~i~~~L~~~~~  324 (331)
                          .           ...........+.+|+.+||+.||.+|| ++.++...|..+..
T Consensus       285 ----~-----------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          285 ----P-----------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             ----C-----------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             ----c-----------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence                0           0011123456789999999999999999 56667777766543


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.5e-39  Score=288.44  Aligned_cols=247  Identities=17%  Similarity=0.157  Sum_probs=184.0

Q ss_pred             hcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--------hhhHHHHHHHHHHHHcCC---------CCCcce
Q 046639           29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--------KEASRSFAAECNALRNIR---------HRNLIK   91 (331)
Q Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~~i~~   91 (331)
                      .++|.+.+.||+|+||+||+|++  +++.||||++....        ....+.+.+|+.+++.++         |||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            46799999999999999999998  57999999997542        222366888999888875         666666


Q ss_pred             eeceee-----------------cc--------cCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHH
Q 046639           92 IITICS-----------------SI--------DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA  146 (331)
Q Consensus        92 ~~~~~~-----------------~~--------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~  146 (331)
                      +.+++.                 ..        ++......++||||+++|++.+.+.+   ..+++..+..++.|++.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence            655432                 10        01235788999999999977666643   346789999999999999


Q ss_pred             HHHHh-hcCCCCeeecCCCCCCEEecCCC--------------------cEEEcccCcccccccCCCCCcccccCCceee
Q 046639          147 IEYFH-HHCQPSIVHGDLKPSNILLDQDI--------------------VAHVGDLGLAKFLFGYEPGTAAETASNSIEI  205 (331)
Q Consensus       147 l~~LH-~~~~~~ivH~dik~~nilv~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~  205 (331)
                      |.||| ++   +|+||||||+|||++.++                    .+||+|||+|+....             ...
T Consensus       174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------------~~~  237 (336)
T 2vuw_A          174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------------GIV  237 (336)
T ss_dssp             HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------TEE
T ss_pred             HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------CcE
Confidence            99999 89   999999999999999887                    899999999987521             134


Q ss_pred             cccccccCCcccCCCCCccchhhHhHHHH-HHHHHhCCCCCCcccCCcchHHHHHHhhCcchhhhhcCcccccccccCCc
Q 046639          206 KGIVGYVAPEYGMGSKASVSGDVYNFGIL-LLEMFTRRRPTDAMFNEGLTLHEFVKMALPDKVMEIVDPSLLLEVTANNY  284 (331)
Q Consensus       206 ~~t~~y~aPE~~~~~~~~~~~DiwslG~i-l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (331)
                      .||+.|+|||++.+.. +.++||||++++ .+++++|..||...     .......    ..+.......     .....
T Consensus       238 ~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~~----~~~~~~~~~~-----~~~~~  302 (336)
T 2vuw_A          238 VFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYLT----DKMLKQMTFK-----TKCNT  302 (336)
T ss_dssp             ECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHHH----HHHHHTCCCS-----SCCCS
T ss_pred             EEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----hhhhHHH----HhhhhhhccC-----cccch
Confidence            6999999999998876 899999998777 78888999998531     0000000    0000000000     00111


Q ss_pred             chHHHHHHHHHHhhccccCCCCCCCCcHHHHH
Q 046639          285 SWIEDCLVAVIGTGVTCSMESPMERMEMRDVV  316 (331)
Q Consensus       285 ~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~i~  316 (331)
                      .....+++.+.+|+.+||+.|     |+.|++
T Consensus       303 ~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          303 PAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            344578899999999999977     888887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=2.4e-32  Score=257.08  Aligned_cols=186  Identities=12%  Similarity=-0.013  Sum_probs=129.8

Q ss_pred             eeeccCeeEEEEeeecCCCceEEEEEeecc----------chhhHHHHHHHHHHHHcC-CCCCcceeeceeecccCCCcc
Q 046639           37 KIGQGGVSIVYKGILDESRSIVAVKVVNLK----------QKEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFD  105 (331)
Q Consensus        37 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~  105 (331)
                      ..+.|++|.+..++....++.+++|.+...          .....+.+.+|+++|+++ .|+||++++++     +++++
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~  315 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ  315 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence            355677777777777667889999998643          123346699999999999 69999999999     56778


Q ss_pred             eeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCccc
Q 046639          106 FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      ..||||||++|++|.+++....  .++.   ..++.||+.||.|+|++   ||+||||||+|||++.+|.+||+|||+|+
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~~--~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr  387 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAGE--EIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIV  387 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTTC--CCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEE
T ss_pred             EEEEEEecCCCCcHHHHHHhCC--CCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCe
Confidence            8999999999999999997643  3433   35889999999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCC
Q 046639          186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP  244 (331)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  244 (331)
                      ....        .........||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus       388 ~~~~--------~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          388 TTPQ--------DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             SCC-----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             eCCC--------CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            6521        1223345679999999999876 456789999999998877665444


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94  E-value=8e-28  Score=225.12  Aligned_cols=192  Identities=18%  Similarity=0.150  Sum_probs=140.4

Q ss_pred             CCcCceeeccCeeEEEEeeecCCCceEEEEEeeccc--------hhhHHHHHHHHHHHHcCCCCCcceeeceeecccCCC
Q 046639           32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ--------KEASRSFAAECNALRNIRHRNLIKIITICSSIDFEG  103 (331)
Q Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  103 (331)
                      +...+.||+|+||+||+|..  .++.+++|......        ....+.+.+|+.++++++||||+++..++.     .
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-----~  410 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV-----D  410 (540)
T ss_dssp             ----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE-----E
T ss_pred             CCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE-----e
Confidence            34567999999999999955  46788999864321        112345799999999999999995544432     2


Q ss_pred             cceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCc
Q 046639          104 FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGL  183 (331)
Q Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~  183 (331)
                      .+..++||||+++++|.+++..          +..++.|++.||.|||++   +|+||||||+||+++.  .+||+|||+
T Consensus       411 ~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGl  475 (540)
T 3en9_A          411 LDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGL  475 (540)
T ss_dssp             TTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTT
T ss_pred             CCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECcc
Confidence            3456999999999999999864          456899999999999999   9999999999999998  999999999


Q ss_pred             ccccccCCCCCcccccCCceeecccccccCCcccCC--CCCccchhhHhHHHHHHHHHhCCCCCC
Q 046639          184 AKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG--SKASVSGDVYNFGILLLEMFTRRRPTD  246 (331)
Q Consensus       184 a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~  246 (331)
                      ++....... .............||+.|+|||++..  ..|+..+|+||..+-..+-+.++.+|.
T Consensus       476 a~~~~~~~~-~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          476 GKISNLDED-KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CEECCCHHH-HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CEECCCccc-cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            987521000 00000001235679999999999887  568888999999999888888777763


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.93  E-value=8.3e-26  Score=194.67  Aligned_cols=143  Identities=21%  Similarity=0.268  Sum_probs=115.3

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch------------------hhHHHHHHHHHHHH
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK------------------EASRSFAAECNALR   82 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~   82 (331)
                      +...+......|.+++.||+|+||.||+|.+ .+++.||+|+++....                  .....+.+|+.+++
T Consensus        81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~  159 (282)
T 1zar_A           81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQ  159 (282)
T ss_dssp             HHHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHH
Confidence            3445555666777789999999999999999 7899999999864321                  13456889999999


Q ss_pred             cCCCCCcceeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecC
Q 046639           83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD  162 (331)
Q Consensus        83 ~l~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~d  162 (331)
                      .++  | +++++++.      .+..++|||++++++|.+ +..        .....++.|++.||.+||+.   ||+|+|
T Consensus       160 ~l~--~-~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrD  218 (282)
T 1zar_A          160 KLQ--G-LAVPKVYA------WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGD  218 (282)
T ss_dssp             HTT--T-SSSCCEEE------EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             hcc--C-CCcCeEEe------ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCC
Confidence            998  4 66666532      145699999999999998 421        23446999999999999999   999999


Q ss_pred             CCCCCEEecCCCcEEEcccCcccc
Q 046639          163 LKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       163 ik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      |||+||+++ ++.++|+|||+++.
T Consensus       219 lkp~NILl~-~~~vkl~DFG~a~~  241 (282)
T 1zar_A          219 LSQYNVLVS-EEGIWIIDFPQSVE  241 (282)
T ss_dssp             CSTTSEEEE-TTEEEECCCTTCEE
T ss_pred             CCHHHEEEE-CCcEEEEECCCCeE
Confidence            999999999 99999999999864


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.85  E-value=4.1e-21  Score=163.33  Aligned_cols=146  Identities=19%  Similarity=0.120  Sum_probs=110.2

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCce--EEEEEeeccchh------------------------hHHHHHH
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSI--VAVKVVNLKQKE------------------------ASRSFAA   76 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~   76 (331)
                      ..+.....-|.+.+.||+|+||.||+|.+..+++.  ||||+++.....                        ....+..
T Consensus        40 ~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (258)
T 1zth_A           40 YKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK  119 (258)
T ss_dssp             HHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred             HHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence            33333344477889999999999999999667888  999987533111                        1135788


Q ss_pred             HHHHHHcCCCCCc--ceeeceeecccCCCcceeeEEEeecCC-C----CHHHHHHhccCCccchHHHHHHHHHHHHHHHH
Q 046639           77 ECNALRNIRHRNL--IKIITICSSIDFEGFDFKAIVFEYMQN-R----NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY  149 (331)
Q Consensus        77 e~~~l~~l~h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~  149 (331)
                      |+.+++.+.|+++  +.++..         ...++||||+.+ |    +|.++...     .+...+..++.|++.+|.+
T Consensus       120 E~~~l~~l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~  185 (258)
T 1zth_A          120 EFRNLERAKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKR  185 (258)
T ss_dssp             HHHHHHHHHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHH
Confidence            9999999987754  333322         346899999932 3    77766532     2245677899999999999


Q ss_pred             Hh-hcCCCCeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          150 FH-HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       150 LH-~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      || +.   ||+|+||||+|||++.  .++|+|||+|...
T Consensus       186 lH~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          186 LYQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHTS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            99 88   9999999999999998  8999999999753


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73  E-value=3.4e-18  Score=151.32  Aligned_cols=145  Identities=14%  Similarity=0.177  Sum_probs=103.8

Q ss_pred             cHHHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccch--------------hhHH--------HHHHHH
Q 046639           21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK--------------EASR--------SFAAEC   78 (331)
Q Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~e~   78 (331)
                      ++..+.....-|.++.+||+|++|.||+|.+. +|+.||||+++....              ....        ....|.
T Consensus        86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~  164 (397)
T 4gyi_A           86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEF  164 (397)
T ss_dssp             HHHHHHHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            45566666666999999999999999999985 688999998753210              0001        123455


Q ss_pred             HHHHcCCCCCcc--eeeceeecccCCCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCC
Q 046639           79 NALRNIRHRNLI--KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP  156 (331)
Q Consensus        79 ~~l~~l~h~~i~--~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~  156 (331)
                      ..|.++.+.++.  ..++.         ...++||||++|++|.++..        ......++.|++.++.+||..   
T Consensus       165 ~nL~rL~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~---  224 (397)
T 4gyi_A          165 AFMKALYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKH---  224 (397)
T ss_dssp             HHHHHHHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHhcCCCCCeeeec---------cCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHC---
Confidence            666665433321  11221         23479999999888876532        123456889999999999999   


Q ss_pred             CeeecCCCCCCEEecCCC----------cEEEcccCcccc
Q 046639          157 SIVHGDLKPSNILLDQDI----------VAHVGDLGLAKF  186 (331)
Q Consensus       157 ~ivH~dik~~nilv~~~~----------~~kl~Dfg~a~~  186 (331)
                      |||||||||.|||++++|          .+.|+||+-+..
T Consensus       225 gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          225 GLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             TEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            999999999999998776          389999997654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.41  E-value=9e-13  Score=111.94  Aligned_cols=150  Identities=17%  Similarity=0.147  Sum_probs=111.7

Q ss_pred             HHHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccC
Q 046639           23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDF  101 (331)
Q Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~  101 (331)
                      ..+......|.+...++.|+.+.||++...  +..+++|+...........+..|+.+++.+. +..+.++++++.    
T Consensus         7 ~~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~----   80 (263)
T 3tm0_A            7 PELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER----   80 (263)
T ss_dssp             HHHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE----
T ss_pred             HHHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe----
Confidence            344556667998899998999999998754  5789999886422122345788999999884 667777887743    


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC---------------------------
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC---------------------------  154 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---------------------------  154 (331)
                       ..+..++|||+++|.+|.+.+..       ......++.++..+++.||+..                           
T Consensus        81 -~~~~~~lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (263)
T 3tm0_A           81 -HDGWSNLLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD  152 (263)
T ss_dssp             -ETTEEEEEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred             -cCCceEEEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence             34678999999999999876311       1223467789999999999810                           


Q ss_pred             -----------------------------CCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          155 -----------------------------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       155 -----------------------------~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                                                   ...++|+|+++.||++++++.+.|+||+.+..
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                         02699999999999998766677999998753


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.21  E-value=1.4e-11  Score=104.26  Aligned_cols=144  Identities=13%  Similarity=0.084  Sum_probs=97.1

Q ss_pred             HHHHHhcCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC--cceeeceeecccC
Q 046639           24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN--LIKIITICSSIDF  101 (331)
Q Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~  101 (331)
                      .+......|.+....+.|..+.||++.. .++..+++|+....   ....+..|+.+++.+.+.+  +.+++.+.     
T Consensus        14 ~l~~~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----   84 (264)
T 1nd4_A           14 AWVERLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----   84 (264)
T ss_dssp             GGTTTTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----
T ss_pred             HHHHhcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----
Confidence            3444445566544444566699999865 35667999987533   2234678899888885434  44566653     


Q ss_pred             CCcceeeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC---------------------------
Q 046639          102 EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC---------------------------  154 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---------------------------  154 (331)
                      ...+..++|||+++|.+|.  ..  .   .   ....++.+++..++.||+..                           
T Consensus        85 ~~~~~~~~v~e~i~G~~l~--~~--~---~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (264)
T 1nd4_A           85 TEAGRDWLLLGEVPGQDLL--SS--H---L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVD  154 (264)
T ss_dssp             ECSSCEEEEEECCSSEETT--TS--C---C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCC
T ss_pred             cCCCCCEEEEEecCCcccC--cC--c---C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCcc
Confidence            2335579999999998884  21  1   1   11245667777788887642                           


Q ss_pred             ----------------------------CCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          155 ----------------------------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       155 ----------------------------~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                                                  ...++|+|++|.||++++++.+.|+||+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          155 QDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             chhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                        01399999999999998777777999998754


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05  E-value=8.3e-10  Score=98.00  Aligned_cols=146  Identities=15%  Similarity=0.170  Sum_probs=102.0

Q ss_pred             CcCceeeccCeeEEEEeeecCCCceEEEEEee--ccc-hhhHHHHHHHHHHHHcCC--CCCcceeeceeecccCCCccee
Q 046639           33 SPANKIGQGGVSIVYKGILDESRSIVAVKVVN--LKQ-KEASRSFAAECNALRNIR--HRNLIKIITICSSIDFEGFDFK  107 (331)
Q Consensus        33 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~~~~  107 (331)
                      ...+.|+.|.++.||++...  +..+++|+..  ... ......+.+|+.+++.+.  +..+++++.++...  ...+..
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~--~~~g~~  116 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIGRA  116 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT--TTTSSC
T ss_pred             ceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC--CccCCe
Confidence            34678999999999998764  4578888764  221 112346788999999986  45577777775432  112457


Q ss_pred             eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC---------------------------------
Q 046639          108 AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC---------------------------------  154 (331)
Q Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---------------------------------  154 (331)
                      ++|||+++|..+.+..    ...++......++.+++.+|+.||+..                                 
T Consensus       117 ~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             EEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             EEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            8999999887775411    112445667778899999999999731                                 


Q ss_pred             ----------------------CCCeeecCCCCCCEEecCCCc--EEEcccCcccc
Q 046639          155 ----------------------QPSIVHGDLKPSNILLDQDIV--AHVGDLGLAKF  186 (331)
Q Consensus       155 ----------------------~~~ivH~dik~~nilv~~~~~--~kl~Dfg~a~~  186 (331)
                                            ...++|+|+++.||+++.++.  +.|+||+.+..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                  137999999999999997753  68999998865


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.05  E-value=5.6e-10  Score=96.77  Aligned_cols=196  Identities=15%  Similarity=0.112  Sum_probs=116.3

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCC--cceeeceeecccCCCcceeeEEE
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRN--LIKIITICSSIDFEGFDFKAIVF  111 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~--i~~~~~~~~~~~~~~~~~~~lv~  111 (331)
                      .+.++.|....||++.     ..+++|+...  ......+..|+.+++.+. +..  +..++.....  .......++||
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence            4678999999999874     3588897642  234567889999998874 322  2333333211  11112457899


Q ss_pred             eecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 046639          112 EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC-------------------------------------  154 (331)
Q Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-------------------------------------  154 (331)
                      ++++|.+|.+....    .++......++.+++..++.||+..                                     
T Consensus        96 ~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           96 TKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             ECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             cccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            99999888653321    1334555667777777777777511                                     


Q ss_pred             ------------------CCCeeecCCCCCCEEecC--CCcEEEcccCcccccccCCCCCcccccC----Cc---eeecc
Q 046639          155 ------------------QPSIVHGDLKPSNILLDQ--DIVAHVGDLGLAKFLFGYEPGTAAETAS----NS---IEIKG  207 (331)
Q Consensus       155 ------------------~~~ivH~dik~~nilv~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~----~~---~~~~~  207 (331)
                                        .+.++|+|+++.||+++.  ++.+.|+||+.+....... ........    ..   .....
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~  250 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILN  250 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHH
Confidence                              136899999999999998  5667899999886531000 00000000    00   00000


Q ss_pred             cccccC-CcccCCCCCccchhhHhHHHHHHHHHhCCCCCC
Q 046639          208 IVGYVA-PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD  246 (331)
Q Consensus       208 t~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  246 (331)
                      ...... |+....  .....+.|+++.++|.+.+|..+|-
T Consensus       251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            000111 111110  1223689999999999999988763


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.76  E-value=1.2e-07  Score=82.74  Aligned_cols=136  Identities=15%  Similarity=0.159  Sum_probs=94.0

Q ss_pred             CCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCC--C--CcceeeceeecccCCCcce
Q 046639           31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH--R--NLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~--~i~~~~~~~~~~~~~~~~~  106 (331)
                      .+...+.++.|....||++     +..+++|+...  ......+..|..+++.+.+  .  .+.++++.         +.
T Consensus        38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~  101 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD  101 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred             ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence            6667789999999999987     45688887632  2223558899998888865  1  22333332         34


Q ss_pred             eeEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCC-------------------------------
Q 046639          107 KAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ-------------------------------  155 (331)
Q Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-------------------------------  155 (331)
                      .++|||+++|.++....-.    .++......++.+++..++.||+...                               
T Consensus       102 ~~lvme~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (320)
T 3r70_A          102 RFNIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK  177 (320)
T ss_dssp             SCEEEECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence            5899999999888643211    12334445566666666666664321                               


Q ss_pred             -----------------------------CCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          156 -----------------------------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       156 -----------------------------~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                                                   +.++|+|++|.||+++.++.+.|+||+.+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence                                         2459999999999999877779999998865


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.74  E-value=1.4e-07  Score=79.99  Aligned_cols=136  Identities=15%  Similarity=0.119  Sum_probs=97.5

Q ss_pred             eeeccCee-EEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCCcceeeEEEeec
Q 046639           37 KIGQGGVS-IVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDFKAIVFEYM  114 (331)
Q Consensus        37 ~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~lv~e~~  114 (331)
                      .+..|..+ .||+......+..+++|+-..   .....+..|...|+.+. +--+.+++.++.     ..+..++|||++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-----~~~~~~lvme~l  102 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIR-----TPDDAWLLTTAI  102 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE-----ETTEEEEEEECC
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEE-----ECCeEEEEEEee
Confidence            45556555 689877766677788997652   23456788999988874 333556666643     235679999999


Q ss_pred             CCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCC---------------------------------------
Q 046639          115 QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ---------------------------------------  155 (331)
Q Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---------------------------------------  155 (331)
                      +|.++.+......      .....++.++...|+.||+...                                       
T Consensus       103 ~G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (272)
T 4gkh_A          103 PGKTAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV  176 (272)
T ss_dssp             CSEEHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred             CCccccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence            9988887764321      2334566778888888886531                                       


Q ss_pred             ----------------CCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          156 ----------------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       156 ----------------~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                                      +.++|+|+.+.||++++++.+-|+||+.+..
T Consensus       177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                            2489999999999999887778999998754


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57  E-value=3.6e-07  Score=78.30  Aligned_cols=78  Identities=15%  Similarity=0.170  Sum_probs=57.3

Q ss_pred             CCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCC---CcceeeceeecccCCCcceee
Q 046639           32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR---NLIKIITICSSIDFEGFDFKA  108 (331)
Q Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~~  108 (331)
                      ..-.+.|+.|.++.||++... +++.+++|+...........+..|+..++.+.+.   .+++++.+         +..+
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~---------~~~~   86 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDRT   86 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETTE
T ss_pred             ccceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEe---------cCcE
Confidence            344678999999999999764 5778999986533332335678999999999764   46666654         2358


Q ss_pred             EEEeecCCCCH
Q 046639          109 IVFEYMQNRNL  119 (331)
Q Consensus       109 lv~e~~~~~~L  119 (331)
                      +|||++++.++
T Consensus        87 lvme~l~g~~~   97 (288)
T 3d1u_A           87 LAMEWVDERPP   97 (288)
T ss_dssp             EEEECCCCCCC
T ss_pred             EEEEecccCCC
Confidence            99999988764


No 263
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.53  E-value=1.2e-06  Score=75.64  Aligned_cols=137  Identities=15%  Similarity=0.150  Sum_probs=86.8

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCC---CcceeeceeecccCCCcceeeEEE
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR---NLIKIITICSSIDFEGFDFKAIVF  111 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~~~lv~  111 (331)
                      .+.++.|....||..     +..+++|+.  ........+..|+.+++.+.+.   .+..++.++.    ...+..++||
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~--~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~   92 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFP--KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY   92 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEE--SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEec--CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence            457888888899987     355788875  2334456788999999998642   2444444432    2234568999


Q ss_pred             eecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhc--------------------------------------
Q 046639          112 EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH--------------------------------------  153 (331)
Q Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--------------------------------------  153 (331)
                      |+++|.++.+..-..    ++......++.++...|+.||+.                                      
T Consensus        93 e~i~G~~l~~~~~~~----l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~  168 (306)
T 3tdw_A           93 RKVQGQILGEDGMAV----LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL  168 (306)
T ss_dssp             ECCCSEECHHHHHTT----SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred             eccCCeECchhhhhh----CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence            999998876531100    11122222333333333333321                                      


Q ss_pred             -------------------CCCCeeecCCCCCCEEecC---CCc-EEEcccCcccc
Q 046639          154 -------------------CQPSIVHGDLKPSNILLDQ---DIV-AHVGDLGLAKF  186 (331)
Q Consensus       154 -------------------~~~~ivH~dik~~nilv~~---~~~-~kl~Dfg~a~~  186 (331)
                                         ..+.++|+|+.+.||+++.   ++. +.|+||+.+..
T Consensus       169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                               2236799999999999987   355 47999998764


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.33  E-value=4.4e-06  Score=73.93  Aligned_cols=78  Identities=12%  Similarity=0.095  Sum_probs=53.2

Q ss_pred             CCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC--cceeeceeecccCCCcceeeE
Q 046639           32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN--LIKIITICSSIDFEGFDFKAI  109 (331)
Q Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~~~~~~l  109 (331)
                      ....+.++.|....+|+...  .+..+++|+....     ..+..|+.+++.+....  +.+++.++..    ..+..++
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~l  111 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYC  111 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEE
T ss_pred             CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEE
Confidence            34467788999999998875  4678889977422     24778888888886433  4455554322    1256789


Q ss_pred             EEeecCCCCHH
Q 046639          110 VFEYMQNRNLE  120 (331)
Q Consensus       110 v~e~~~~~~L~  120 (331)
                      |||+++|.++.
T Consensus       112 v~e~l~G~~l~  122 (362)
T 3ovc_A          112 ISRRAQGVTLQ  122 (362)
T ss_dssp             EEECCCSEETT
T ss_pred             EEEecCCCCcc
Confidence            99999876553


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.21  E-value=8.4e-06  Score=73.08  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=46.3

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccch-------hhHHHHHHHHHHHHcCCC--CC-cceeeceeecccCCCc
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-------EASRSFAAECNALRNIRH--RN-LIKIITICSSIDFEGF  104 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~~  104 (331)
                      .+.||.|..+.||++....+++.+++|.......       .....+..|.++++.+..  +. +..++.+.       .
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~  107 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T  107 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence            5689999999999997765667899997642111       112345678888887632  33 33444331       1


Q ss_pred             ceeeEEEeecCCC
Q 046639          105 DFKAIVFEYMQNR  117 (331)
Q Consensus       105 ~~~~lv~e~~~~~  117 (331)
                      ...++|||++++.
T Consensus       108 ~~~~lvmE~l~g~  120 (397)
T 2olc_A          108 EMAVTVMEDLSHL  120 (397)
T ss_dssp             TTTEEEECCCTTS
T ss_pred             CccEEEEEeCCCc
Confidence            2357999999763


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08  E-value=8.1e-06  Score=72.02  Aligned_cols=84  Identities=8%  Similarity=0.058  Sum_probs=51.8

Q ss_pred             Ccee-eccCeeEEEEeeec--C----CCceEEEEEeeccch--h-hHHHHHHHHHHHHcCC-C--CCcceeeceeecccC
Q 046639           35 ANKI-GQGGVSIVYKGILD--E----SRSIVAVKVVNLKQK--E-ASRSFAAECNALRNIR-H--RNLIKIITICSSIDF  101 (331)
Q Consensus        35 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~~--~-~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~~~~  101 (331)
                      .+.| +.|....+|+....  .    +++.+++|+......  . ....+..|+.+++.+. +  -.+.+++.++.... 
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-  103 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-  103 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence            4567 88889999987653  0    156788887643220  0 1245678888888874 2  34666666643211 


Q ss_pred             CCcceeeEEEeecCCCCHH
Q 046639          102 EGFDFKAIVFEYMQNRNLE  120 (331)
Q Consensus       102 ~~~~~~~lv~e~~~~~~L~  120 (331)
                       ..+..++|||+++|.++.
T Consensus       104 -~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          104 -VLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             -TTSSCEEEEECCCCBCCC
T ss_pred             -ccCCceEEEEecCCCChh
Confidence             113467999999876543


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89  E-value=9.3e-05  Score=64.56  Aligned_cols=31  Identities=32%  Similarity=0.468  Sum_probs=27.7

Q ss_pred             CCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       156 ~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      ..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            3899999999999998888999999997753


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.87  E-value=7.9e-05  Score=63.59  Aligned_cols=80  Identities=15%  Similarity=0.171  Sum_probs=54.7

Q ss_pred             cCCCcCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCC---CCcceeeceeecccCCCcce
Q 046639           30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH---RNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~  106 (331)
                      ....-.+.+|.|..+.||+.... +|+.+++|+...........+..|+..|+.+..   -.+.+++.+         +.
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~~   84 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DD   84 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ET
T ss_pred             CCeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---------cC
Confidence            35566788999999999998764 678899998754433333457789998888742   223444443         22


Q ss_pred             eeEEEeecCCCCH
Q 046639          107 KAIVFEYMQNRNL  119 (331)
Q Consensus       107 ~~lv~e~~~~~~L  119 (331)
                      .++|||+++++..
T Consensus        85 ~~lv~e~l~~~~~   97 (288)
T 3f7w_A           85 RTLAMEWVDERPP   97 (288)
T ss_dssp             TEEEEECCCCCCC
T ss_pred             ceEEEEeecccCC
Confidence            4789999876543


No 269
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73  E-value=0.00038  Score=60.01  Aligned_cols=76  Identities=16%  Similarity=0.124  Sum_probs=54.8

Q ss_pred             cCceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCC---CCCcceeeceeecccCCCcceeeEE
Q 046639           34 PANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR---HRNLIKIITICSSIDFEGFDFKAIV  110 (331)
Q Consensus        34 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~~~~lv  110 (331)
                      -.+.|+.|....+|+...  ++..+++|+....   ....+..|+..|+.+.   ...+++++.++.     ..+..++|
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lv  109 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLL  109 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEE
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEE
Confidence            346789999999999875  3567889987532   2456788888888873   355667776643     23567999


Q ss_pred             EeecCCCCH
Q 046639          111 FEYMQNRNL  119 (331)
Q Consensus       111 ~e~~~~~~L  119 (331)
                      ||++++..+
T Consensus       110 me~l~G~~~  118 (312)
T 3jr1_A          110 LEALNKSKN  118 (312)
T ss_dssp             EECCCCCCC
T ss_pred             EEeccCCCC
Confidence            999988654


No 270
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.65  E-value=0.00037  Score=55.97  Aligned_cols=103  Identities=16%  Similarity=0.075  Sum_probs=67.2

Q ss_pred             CCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCEEecCCCcEEEcccCcccccccCCCCCcc
Q 046639          117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA  196 (331)
Q Consensus       117 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~  196 (331)
                      .+|.++++.. +.++++.++|.++.|.+.+|.-.-...  .-..+=+.|..|++..+|.|.+.+ +.+.           
T Consensus        33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc-----------
Confidence            4799999864 456889999999999999988762211  111223357999999999998753 2110           


Q ss_pred             cccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCC
Q 046639          197 ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP  244 (331)
Q Consensus       197 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  244 (331)
                               .....+.|||... ...+.+.=|||||+++|..+-=..|
T Consensus        98 ---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 ---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence                     1122367888864 3557888999999999999974443


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61  E-value=0.00031  Score=63.30  Aligned_cols=30  Identities=27%  Similarity=0.516  Sum_probs=27.0

Q ss_pred             CeeecCCCCCCEEecCCCcEEEcccCccccc
Q 046639          157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFL  187 (331)
Q Consensus       157 ~ivH~dik~~nilv~~~~~~kl~Dfg~a~~~  187 (331)
                      .++|+|+.+.||+++.++ +.++||+.+...
T Consensus       233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             EEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             eEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            899999999999999877 999999988753


No 272
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.59  E-value=0.0014  Score=56.61  Aligned_cols=167  Identities=11%  Similarity=0.086  Sum_probs=88.6

Q ss_pred             cCCcccHHHHHHHhcCCCcC-----ceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC--
Q 046639           16 QFPMISYAELSKATNNFSPA-----NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN--   88 (331)
Q Consensus        16 ~~~~~~~~~~~~~~~~y~~~-----~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--   88 (331)
                      .|+.++..++.....+|.+.     +.|+.|....+|+.... ++ .+++|+....  .....+..|+.+++.+....  
T Consensus         3 v~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~   78 (322)
T 2ppq_A            3 VYTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLS   78 (322)
T ss_dssp             --CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCC
T ss_pred             ccccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCC
Confidence            46678888888888888763     34556777889988754 23 5888988642  11233556777777663212  


Q ss_pred             cceeeceeec-ccCCCcceeeEEEeecCCCCHH-----------HHH---Hhc--c--CC-----c-cchHHHHH-----
Q 046639           89 LIKIITICSS-IDFEGFDFKAIVFEYMQNRNLE-----------QWL---RQS--N--GQ-----L-RFLTQRVN-----  138 (331)
Q Consensus        89 i~~~~~~~~~-~~~~~~~~~~lv~e~~~~~~L~-----------~~l---~~~--~--~~-----~-~~~~~~~~-----  138 (331)
                      +.+++..... .-....+..++++++++|..+.           +.+   ...  .  ..     . ..+.....     
T Consensus        79 vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  158 (322)
T 2ppq_A           79 CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEER  158 (322)
T ss_dssp             CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGG
T ss_pred             CCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHH
Confidence            2333321000 0001124568999999875431           111   110  0  00     0 00111000     


Q ss_pred             -------HHHHHHHHHHHHhhc----CCCCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          139 -------IAIDVSFAIEYFHHH----CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       139 -------~~~~i~~~l~~LH~~----~~~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                             +...+...+..+...    ...+++|+|+.+.||++++++.+.++||+.+..
T Consensus       159 ~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          159 ADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             GGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence                   000133344444421    123799999999999999877668999997753


No 273
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.44  E-value=0.00045  Score=59.20  Aligned_cols=71  Identities=11%  Similarity=0.163  Sum_probs=42.7

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCc-ceeeceeecccCCCcceeeEEEee
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL-IKIITICSSIDFEGFDFKAIVFEY  113 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~~~~~lv~e~  113 (331)
                      .+.|+.|....+|++      ..+++|+...... .......|+.+++.+....+ .+++..+     .  ..-++++|+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~-----~--~~~~~v~e~   88 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD-----P--ATGVMVTRY   88 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-----T--TTCCEEEEC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE-----C--CCCEEEEee
Confidence            678999999999998      3578898753321 11223467777776642222 3444432     1  223689999


Q ss_pred             c-CCCCH
Q 046639          114 M-QNRNL  119 (331)
Q Consensus       114 ~-~~~~L  119 (331)
                      + ++.++
T Consensus        89 i~~g~~l   95 (301)
T 3dxq_A           89 IAGAQTM   95 (301)
T ss_dssp             CTTCEEC
T ss_pred             cCCCccC
Confidence            9 66544


No 274
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.40  E-value=0.0026  Score=55.02  Aligned_cols=102  Identities=12%  Similarity=0.064  Sum_probs=60.0

Q ss_pred             hccCCcccHHHHHHHhcCCCc-----CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC
Q 046639           14 KQQFPMISYAELSKATNNFSP-----ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN   88 (331)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~   88 (331)
                      ...++.++...+......|.+     ...++ |....||++... +++.+++|...... .....+..|..+++.+....
T Consensus         5 ~~~~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g   81 (328)
T 1zyl_A            5 AFTFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDE   81 (328)
T ss_dssp             CCCCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcC
Confidence            356788888888888777754     23466 777889987653 45568899885221 12245666777777764212


Q ss_pred             --cceeeceeecccCCCcceeeEEEeecCCCC
Q 046639           89 --LIKIITICSSIDFEGFDFKAIVFEYMQNRN  118 (331)
Q Consensus        89 --i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~  118 (331)
                        ++.++..-...-....+..++++++++|..
T Consensus        82 ~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~  113 (328)
T 1zyl_A           82 VPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  113 (328)
T ss_dssp             CSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             CeecceeecCCcEEEEECCEEEEEEEecCCCC
Confidence              333333200000111345678999997744


No 275
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.22  E-value=0.00092  Score=59.22  Aligned_cols=142  Identities=11%  Similarity=0.143  Sum_probs=79.2

Q ss_pred             CceeeccCeeEEEEeeecC-------CCceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCCcce
Q 046639           35 ANKIGQGGVSIVYKGILDE-------SRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .+.|..|-...+|++....       +++.+++|+... .......+.+|..+++.+. +.-..++++.+     .+   
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~---  125 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVF-----PE---  125 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT---
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC---
Confidence            4577778888899987632       346788998632 2223455668999988874 32235555553     22   


Q ss_pred             eeEEEeecCCCCHH--------------HHHHh---cc---CCcc--chHHHHHHHHHHHH-------------------
Q 046639          107 KAIVFEYMQNRNLE--------------QWLRQ---SN---GQLR--FLTQRVNIAIDVSF-------------------  145 (331)
Q Consensus       107 ~~lv~e~~~~~~L~--------------~~l~~---~~---~~~~--~~~~~~~~~~~i~~-------------------  145 (331)
                       .+|+||++|.+|.              +.+.+   ..   +...  -+..+..+..++..                   
T Consensus       126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  204 (379)
T 3feg_A          126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD  204 (379)
T ss_dssp             -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred             -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence             2899999875442              11111   00   1111  12334444433321                   


Q ss_pred             HHHH----Hhhc-CCCCeeecCCCCCCEEecCC----CcEEEcccCcccc
Q 046639          146 AIEY----FHHH-CQPSIVHGDLKPSNILLDQD----IVAHVGDLGLAKF  186 (331)
Q Consensus       146 ~l~~----LH~~-~~~~ivH~dik~~nilv~~~----~~~kl~Dfg~a~~  186 (331)
                      .+..    |... ....++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            1222    2211 12379999999999999876    6899999998754


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.98  E-value=0.0079  Score=52.11  Aligned_cols=31  Identities=29%  Similarity=0.284  Sum_probs=27.2

Q ss_pred             CCeeecCCCCCCEEecCC----CcEEEcccCcccc
Q 046639          156 PSIVHGDLKPSNILLDQD----IVAHVGDLGLAKF  186 (331)
Q Consensus       156 ~~ivH~dik~~nilv~~~----~~~kl~Dfg~a~~  186 (331)
                      ..++|+|+.+.||+++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            389999999999999874    6789999998865


No 277
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97  E-value=0.0017  Score=58.57  Aligned_cols=73  Identities=22%  Similarity=0.292  Sum_probs=46.2

Q ss_pred             CceeeccCeeEEEEeeecC-------CCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCc-ceeeceeecccCCCcce
Q 046639           35 ANKIGQGGVSIVYKGILDE-------SRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL-IKIITICSSIDFEGFDF  106 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~~~  106 (331)
                      .+.|+.|....+|++....       .+..+++|+......  ...+..|..+++.+...++ .++++.+     .+   
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~---  147 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIF-----SG---  147 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence            4577888889999987642       246788998843211  1345578888888753333 4555542     21   


Q ss_pred             eeEEEeecCCCC
Q 046639          107 KAIVFEYMQNRN  118 (331)
Q Consensus       107 ~~lv~e~~~~~~  118 (331)
                       .+|+||++|.+
T Consensus       148 -g~v~e~l~G~~  158 (429)
T 1nw1_A          148 -GRLEEYIPSRP  158 (429)
T ss_dssp             -EEEECCCCEEE
T ss_pred             -CEEEEEeCCcc
Confidence             38899997633


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.91  E-value=0.0034  Score=57.07  Aligned_cols=75  Identities=17%  Similarity=0.115  Sum_probs=45.5

Q ss_pred             CceeeccCeeEEEEeeecCCCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCCc-ceeeceeecccCCCcceeeEEEee
Q 046639           35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL-IKIITICSSIDFEGFDFKAIVFEY  113 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~~~~~lv~e~  113 (331)
                      .+.|+.|-...+|++.....+..+++|+....... .-....|..+++.+...++ .++++.+     .+    ..|+||
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~-----~~----G~v~e~  182 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF-----TN----GRIEEF  182 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE-----TT----EEEEEC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe-----CC----eEEEEe
Confidence            45788888899999887543477889987432211 1112578888888864444 4555543     11    259999


Q ss_pred             cCCCCH
Q 046639          114 MQNRNL  119 (331)
Q Consensus       114 ~~~~~L  119 (331)
                      ++|.+|
T Consensus       183 I~G~~l  188 (458)
T 2qg7_A          183 MDGYAL  188 (458)
T ss_dssp             CCSEEC
T ss_pred             eCCccC
Confidence            987443


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.77  E-value=0.0021  Score=56.67  Aligned_cols=74  Identities=11%  Similarity=0.138  Sum_probs=41.8

Q ss_pred             CceeeccCeeEEEEeeecC--------CCceEEEEEeeccchhhHHHHHHHHHHHHcCCCCC-cceeeceeecccCCCcc
Q 046639           35 ANKIGQGGVSIVYKGILDE--------SRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN-LIKIITICSSIDFEGFD  105 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~~  105 (331)
                      .+.|+.|....+|++....        .++.+++|+...... .......|..+++.+...+ ..++++..     .   
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~---  108 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N---  108 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T---
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C---
Confidence            4577788888999987642        125788888753222 1122457778777774223 34555431     1   


Q ss_pred             eeeEEEeecCCCC
Q 046639          106 FKAIVFEYMQNRN  118 (331)
Q Consensus       106 ~~~lv~e~~~~~~  118 (331)
                       -++|+|+++|.+
T Consensus       109 -~~~v~e~i~G~~  120 (369)
T 3c5i_A          109 -GGRIEEWLYGDP  120 (369)
T ss_dssp             -TEEEEECCCSEE
T ss_pred             -CcEEEEEecCCc
Confidence             268999998754


No 280
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.32  E-value=0.023  Score=50.54  Aligned_cols=31  Identities=23%  Similarity=0.283  Sum_probs=27.1

Q ss_pred             CCeeecCCCCCCEEecCC------CcEEEcccCcccc
Q 046639          156 PSIVHGDLKPSNILLDQD------IVAHVGDLGLAKF  186 (331)
Q Consensus       156 ~~ivH~dik~~nilv~~~------~~~kl~Dfg~a~~  186 (331)
                      ..++|+|+.+.||+++.+      +.+.++||..+..
T Consensus       244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence            379999999999999876      7899999998754


No 281
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.77  E-value=0.062  Score=46.63  Aligned_cols=31  Identities=16%  Similarity=0.262  Sum_probs=27.6

Q ss_pred             CCeeecCCCCCCEEecCCCcEEEcccCcccc
Q 046639          156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKF  186 (331)
Q Consensus       156 ~~ivH~dik~~nilv~~~~~~kl~Dfg~a~~  186 (331)
                      ..++|+|+.+.||+++.++.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3799999999999999888899999987754


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.92  E-value=0.12  Score=46.29  Aligned_cols=75  Identities=11%  Similarity=0.093  Sum_probs=45.9

Q ss_pred             CceeeccCeeEEEEeeecCC-------CceEEEEEeeccchhhHHHHHHHHHHHHcCC-CCCcceeeceeecccCCCcce
Q 046639           35 ANKIGQGGVSIVYKGILDES-------RSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDF  106 (331)
Q Consensus        35 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~  106 (331)
                      .+.+..|-...+|++.....       +..+++++.... ........+|..+++.+. +.-..++++.+     .    
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~----  144 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VGKFYDSKVELDVFRYLSNINIAPNIIADF-----P----  144 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C-CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cchhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----
Confidence            45677788888999876421       467888986432 222223457888887774 22234444432     1    


Q ss_pred             eeEEEeecCCCCH
Q 046639          107 KAIVFEYMQNRNL  119 (331)
Q Consensus       107 ~~lv~e~~~~~~L  119 (331)
                      -+.|+||++|.+|
T Consensus       145 ~~~I~efI~G~~l  157 (424)
T 3mes_A          145 EGRIEEFIDGEPL  157 (424)
T ss_dssp             TEEEEECCCSEEC
T ss_pred             CCEEEEEeCCccC
Confidence            2689999988553


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.04  E-value=0.032  Score=49.78  Aligned_cols=30  Identities=23%  Similarity=0.367  Sum_probs=25.2

Q ss_pred             CeeecCCCCCCEEe------cCCCcEEEcccCcccc
Q 046639          157 SIVHGDLKPSNILL------DQDIVAHVGDLGLAKF  186 (331)
Q Consensus       157 ~ivH~dik~~nilv------~~~~~~kl~Dfg~a~~  186 (331)
                      .++|+|+.+.||++      +.++.+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4456799999998764


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.06  E-value=1.5  Score=34.95  Aligned_cols=116  Identities=15%  Similarity=0.187  Sum_probs=73.0

Q ss_pred             CCCCcceeeceeecccCCCcceeeEEEeecC-CCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 046639           85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQ-NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDL  163 (331)
Q Consensus        85 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~di  163 (331)
                      .||+.+.. .+     -..++.+.+.++.-+ +.++.. ++.     .+....+.++.+++....+++     .-+|.-+
T Consensus        43 ~~~~Fl~~-~I-----~e~eD~v~~~y~~~~~~~~f~~-ik~-----~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L  105 (215)
T 4ann_A           43 HSPYFIDA-EL-----TELRDSFQIHYDINDNHTPFDN-IKS-----FTKNEKLRYLLNIKNLEEVNR-----TRYTFVL  105 (215)
T ss_dssp             CCTTBCCE-EE-----EECSSEEEEEECCCTTSEEGGG-GGG-----SCHHHHHHHHHHGGGGGGGGG-----SSEECCC
T ss_pred             cCCcccce-EE-----EEcccEEEEEEEcCcccCCHHH-HHh-----cCHHHHHHHHHHHHHHHHHhc-----CceEEEE
Confidence            57877754 22     122344444444432 333433 322     445778888888888775555     4478999


Q ss_pred             CCCCEEecCCCcEEEcccCcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCC
Q 046639          164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRR  243 (331)
Q Consensus       164 k~~nilv~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~  243 (331)
                      .|+|++++.++.+++.-.|+-..                         ++|.     ..++..=.-.+=+++..+++++.
T Consensus       106 ~P~NL~f~~~~~p~i~~RGik~~-------------------------l~P~-----~~~ee~fL~qyKAliiall~~K~  155 (215)
T 4ann_A          106 APDELFFTRDGLPIAKTRGLQNV-------------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQ  155 (215)
T ss_dssp             SGGGEEECTTSCEEESCCEETTT-------------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTC
T ss_pred             ecceEEEcCCCCEEEEEccCccC-------------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999987775432                         2222     12222233456778889999988


Q ss_pred             CCCc
Q 046639          244 PTDA  247 (331)
Q Consensus       244 pf~~  247 (331)
                      .|..
T Consensus       156 ~Fe~  159 (215)
T 4ann_A          156 SFDA  159 (215)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            8864


No 285
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.64  E-value=0.09  Score=47.78  Aligned_cols=61  Identities=10%  Similarity=0.017  Sum_probs=17.7

Q ss_pred             CcCceeeccCeeEEEEeeecCCCceEEE------EEeecc--chhhHHHHHHHHHHHHcCCCCCcceeecee
Q 046639           33 SPANKIGQGGVSIVYKGILDESRSIVAV------KVVNLK--QKEASRSFAAECNALRNIRHRNLIKIITIC   96 (331)
Q Consensus        33 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   96 (331)
                      .+.+.||   ||.||+|.+..+..+||+      |.....  ..+....+.+|..+++.++|||+++.+++.
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            4567776   999999999765568888      655321  122334577888999989999999887664


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.85  E-value=2.6  Score=33.75  Aligned_cols=103  Identities=13%  Similarity=0.106  Sum_probs=65.0

Q ss_pred             cceeeEEEeecC-CCCHHHHHHhccCCccchHHHHHHHHHHHHHHH-HHhhcCCCCeeecCCCCCCEEecCCCcEEEccc
Q 046639          104 FDFKAIVFEYMQ-NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE-YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDL  181 (331)
Q Consensus       104 ~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~-~LH~~~~~~ivH~dik~~nilv~~~~~~kl~Df  181 (331)
                      ++.+.+.++.-+ +.++.. ++.     .+....+.++.+++.... +++     .-+|.-+.|+|++++.++.+++.-.
T Consensus        60 eD~~~i~y~~~~~~~~f~~-i~~-----~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hR  128 (219)
T 4ano_A           60 EDEVKVVIKPPSSFLTFAA-IRK-----TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHV  128 (219)
T ss_dssp             SSEEEEEEECCTTCEEHHH-HHT-----SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCC
T ss_pred             CCEEEEEEEcCcccCcHHH-HHh-----cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEc
Confidence            344455555432 334443 332     445777778877777655 444     5688999999999999999999888


Q ss_pred             CcccccccCCCCCcccccCCceeecccccccCCcccCCCCCccchhhHhHHHHHHHHHhCCCCCCc
Q 046639          182 GLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA  247 (331)
Q Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  247 (331)
                      |+-..                         ++|.-     .++.-=.-.+=|++..++.++..|..
T Consensus       129 Gi~~~-------------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~  164 (219)
T 4ano_A          129 GVKES-------------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE  164 (219)
T ss_dssp             EETTT-------------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred             CCccc-------------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            76432                         23322     12222233567788888888877753


No 287
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=48.65  E-value=43  Score=33.66  Aligned_cols=25  Identities=24%  Similarity=0.264  Sum_probs=22.7

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++..|.+.-+|||.+-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            6888999999999999999999763


No 288
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=42.86  E-value=62  Score=32.47  Aligned_cols=25  Identities=32%  Similarity=0.304  Sum_probs=22.4

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++.+|.+.-+|||.+-
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhh
Confidence            5778999999999999999999873


No 289
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=39.69  E-value=54  Score=32.41  Aligned_cols=25  Identities=24%  Similarity=0.256  Sum_probs=22.5

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++..|.+.-+|||.+-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            6788999999999999999999763


No 290
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=36.92  E-value=2.6e+02  Score=26.03  Aligned_cols=25  Identities=28%  Similarity=0.274  Sum_probs=22.2

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++.+|.+.=+|||.+-
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            5777999999999999999999873


No 291
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=35.36  E-value=54  Score=32.47  Aligned_cols=25  Identities=24%  Similarity=0.254  Sum_probs=22.2

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++..|.+.-+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            6788999999999999999999874


No 292
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=30.28  E-value=33  Score=32.63  Aligned_cols=25  Identities=28%  Similarity=0.283  Sum_probs=22.6

Q ss_pred             cCCCCCCEEecCCCcEEEcccCccc
Q 046639          161 GDLKPSNILLDQDIVAHVGDLGLAK  185 (331)
Q Consensus       161 ~dik~~nilv~~~~~~kl~Dfg~a~  185 (331)
                      +|=.++|||++..|.+.-+|||.+-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            6888999999999999999999873


No 293
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=29.51  E-value=2.7e+02  Score=25.47  Aligned_cols=140  Identities=14%  Similarity=0.039  Sum_probs=86.2

Q ss_pred             eeeccCeeEEEEeeecCCCceEEEEEeecc----chhhHHHHHHHHHHHHcCCCCCcceeeceeeccc------------
Q 046639           37 KIGQGGVSIVYKGILDESRSIVAVKVVNLK----QKEASRSFAAECNALRNIRHRNLIKIITICSSID------------  100 (331)
Q Consensus        37 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------------  100 (331)
                      .+.-|--|.|..+-... +-+++.|+|+-.    +.-..+.......+.+  +|..+=++.+.....+            
T Consensus       313 i~APGikGmVM~VFTLP-Sf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eL  389 (578)
T 3eps_A          313 IEAPGIRGMVMLVFTLP-GFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPAL  389 (578)
T ss_dssp             EECSSCCCSSEEEEECT-TCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred             EECCCCCceEEEEEcCC-CCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHH
Confidence            35567778887776653 346888999632    1111233333344433  3544444432211000            


Q ss_pred             -----------C-CCccee---eEEEeecCCCCHHHHHHhccCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 046639          101 -----------F-EGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKP  165 (331)
Q Consensus       101 -----------~-~~~~~~---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~~~ivH~dik~  165 (331)
                                 . ..++.+   .+.+|.- ...|-=++++..     ..+....+.+.-.|+..|-..   +|.-||.=-
T Consensus       390 L~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~a~-----~~~~~~av~eYG~AIKqLAaA---NIFPGDML~  460 (578)
T 3eps_A          390 MELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQVE-----GQQLRDAIEEYGNAIRQLAAA---NIFPGDMLF  460 (578)
T ss_dssp             HHHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHHCC-----THHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred             HHHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhhCC-----HHHHHHHHHHHHHHHHHHHHh---cCCCccccc
Confidence                       0 111222   1233433 456666676543     245566777888999999998   999999999


Q ss_pred             CCEEecCCCcEEEcccCcccccc
Q 046639          166 SNILLDQDIVAHVGDLGLAKFLF  188 (331)
Q Consensus       166 ~nilv~~~~~~kl~Dfg~a~~~~  188 (331)
                      .|+=|+..|.|...|+.-.+++.
T Consensus       461 KNFGVTRhgRVVFYDYDEI~ylT  483 (578)
T 3eps_A          461 KNFGVTRHGRVVFYDYDEICYMT  483 (578)
T ss_dssp             GGEEECTTCCEEECCGGGCEEST
T ss_pred             ccCCccccceEEEecccceeeec
Confidence            99999999999999999888773


No 294
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=28.84  E-value=33  Score=23.47  Aligned_cols=29  Identities=10%  Similarity=0.001  Sum_probs=23.2

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .||..++.-.|++|.|..||.+.+..-..
T Consensus         9 ~LI~~AI~~sp~~~ltL~eIY~~i~~~fp   37 (100)
T 1kq8_A            9 ALITMAIRDSAGGRLTLAEINEYLMGKFP   37 (100)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhCCCCCCcHHHHHHHHHHhCc
Confidence            35556677789999999999999987654


No 295
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=28.69  E-value=22  Score=23.53  Aligned_cols=29  Identities=7%  Similarity=0.068  Sum_probs=22.9

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .|+..++.-.|++|.|..||.+.+..-..
T Consensus        12 ~LI~~Ai~~sp~~~ltL~eIY~~i~~~fp   40 (85)
T 3bpy_A           12 ELISQAIESAPEKRLTLAQIYEWMVRTVP   40 (85)
T ss_dssp             HHHHHHHHHSTTSCBCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHhCCcCCccHHHHHHHHHHhCc
Confidence            34455666799999999999999987644


No 296
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.76  E-value=4.5  Score=36.71  Aligned_cols=28  Identities=18%  Similarity=0.249  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHcCCCCCcceeeceeec
Q 046639           71 SRSFAAECNALRNIRHRNLIKIITICSS   98 (331)
Q Consensus        71 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~   98 (331)
                      ...|..|++.+.+++|+|++++.+||.+
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s  350 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRT  350 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcC
Confidence            4568999999999999999999999743


No 297
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=25.29  E-value=35  Score=23.22  Aligned_cols=29  Identities=7%  Similarity=0.171  Sum_probs=22.3

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .||..++.-.|++|.|..||.+.+..-..
T Consensus         9 ~LI~~AI~~sp~~~ltL~eIY~~i~~~fp   37 (97)
T 2hdc_A            9 ALITMAILQSPQKKLTLSGICEFISNRFP   37 (97)
T ss_dssp             HHHHHHHHTCTTTCBCHHHHHHHHHHHCH
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHhch
Confidence            34445666789999999999999987543


No 298
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=24.56  E-value=35  Score=23.45  Aligned_cols=29  Identities=3%  Similarity=0.014  Sum_probs=22.7

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .||...+.-.|++|.|..||.+.+.....
T Consensus        10 ~LI~~AI~~sp~~~LtL~eIY~~I~~~fp   38 (102)
T 1vtn_C           10 SLITMAIQQAPGKMLTLSEIYQWIMDLFP   38 (102)
T ss_dssp             HHHHHHHHTSTTSCBCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHhCCCCCCcHHHHHHHHHHcCC
Confidence            34445666789999999999999987654


No 299
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=23.99  E-value=52  Score=24.39  Aligned_cols=25  Identities=12%  Similarity=0.345  Sum_probs=20.6

Q ss_pred             CCCCCCCCcHHHHHHHHHHhhhhhh
Q 046639          303 MESPMERMEMRDVVAKLRHARETFL  327 (331)
Q Consensus       303 ~~~P~~Rps~~~i~~~L~~~~~~~~  327 (331)
                      ..+|..||++.++++.|+++...+.
T Consensus       139 ~~~~~~~~~~~eil~~l~~l~~e~~  163 (164)
T 4gqc_A          139 TDNPLNEPDYDEVVREANKIAGELV  163 (164)
T ss_dssp             CSCTTCCCCHHHHHHHHHHHHHHCC
T ss_pred             eCCCCCCCCHHHHHHHHHHHhcccc
Confidence            4478899999999999998876553


No 300
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=23.40  E-value=36  Score=23.72  Aligned_cols=28  Identities=7%  Similarity=0.171  Sum_probs=22.0

Q ss_pred             hhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          297 TGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       297 l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      ||..++.-.|++|.|..||.+.+..-..
T Consensus        11 LI~~AI~~sp~~~LtL~eIY~~I~~~fP   38 (109)
T 2hfh_A           11 LITMAILQSPQKKLTLSGICEFISNRFP   38 (109)
T ss_dssp             HHHHHHHTCSSSCBCHHHHHHHHHTTCH
T ss_pred             HHHHHHHhCCCCCCcHHHHHHHHHHhcc
Confidence            4445666789999999999999986543


No 301
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=22.60  E-value=40  Score=23.84  Aligned_cols=29  Identities=7%  Similarity=0.030  Sum_probs=22.6

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .||..++.-.|+.|.|..||.+.+..-..
T Consensus        18 ~LI~~AI~~sp~~~LTL~eIY~~I~~~fP   46 (117)
T 3coa_C           18 DLITKAIESSAEKRLTLSQIYEWMVKSVP   46 (117)
T ss_dssp             HHHHHHHHTSTTSCBCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhCc
Confidence            34445666789999999999999987643


No 302
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=22.55  E-value=33  Score=23.97  Aligned_cols=29  Identities=7%  Similarity=0.068  Sum_probs=23.0

Q ss_pred             HhhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          296 GTGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       296 ~l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      .||..++.-.|++|.|..||.+.|..-..
T Consensus        31 ~LI~~AI~~sp~~~LtL~eIY~~I~~~fP   59 (110)
T 3l2c_A           31 ELISQAIESAPEKRLTLAQIYEWMVRTVP   59 (110)
T ss_dssp             HHHHHHHHHSTTSCBCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHhCCccCcCHHHHHHHHHHhCc
Confidence            34455666799999999999999987654


No 303
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=21.69  E-value=35  Score=22.96  Aligned_cols=28  Identities=11%  Similarity=0.100  Sum_probs=22.1

Q ss_pred             hhccccCCCCCCCCcHHHHHHHHHHhhh
Q 046639          297 TGVTCSMESPMERMEMRDVVAKLRHARE  324 (331)
Q Consensus       297 l~~~cl~~~P~~Rps~~~i~~~L~~~~~  324 (331)
                      |+...+.-.|++|.|..||.+.+..-..
T Consensus        11 LI~~AI~~sp~~~ltL~eIY~~i~~~fp   38 (93)
T 2a07_F           11 LIRQAIMESSDRQLTLNEIYSWFTRTFA   38 (93)
T ss_dssp             HHHHHHHHSTTSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCccHHHHHHHHHHhCC
Confidence            4445566689999999999999987554


Done!