Query 046644
Match_columns 234
No_of_seqs 176 out of 1222
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 04:37:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 8.2E-65 2.8E-69 447.7 21.3 230 2-234 81-333 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 9.1E-64 3.1E-68 434.1 20.0 228 2-234 37-297 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 3.1E-63 1.1E-67 431.6 16.4 222 2-234 35-281 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 1.8E-60 6.1E-65 413.1 14.6 219 2-234 33-293 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.3E-57 4.5E-62 398.3 17.5 218 2-234 43-312 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-54 4.3E-59 371.3 17.1 204 2-218 29-263 (280)
7 3dkq_A PKHD-type hydroxylase S 93.0 0.43 1.5E-05 39.1 8.4 80 109-208 98-194 (243)
8 2hbt_A EGL nine homolog 1; pro 92.2 0.66 2.3E-05 37.9 8.6 83 111-209 118-213 (247)
9 2rg4_A Uncharacterized protein 91.5 0.87 3E-05 36.4 8.4 42 158-211 167-209 (216)
10 2iuw_A Alkylated repair protei 88.2 4.4 0.00015 32.7 10.2 86 110-207 126-228 (238)
11 3s57_A Alpha-ketoglutarate-dep 84.3 6.6 0.00023 30.9 9.1 82 110-205 100-199 (204)
12 3itq_A Prolyl 4-hydroxylase, a 82.7 2 6.8E-05 34.4 5.4 87 110-209 111-212 (216)
13 2jig_A Prolyl-4 hydroxylase; h 77.7 4.6 0.00016 32.0 6.0 48 159-210 170-218 (224)
14 3tht_A Alkylated DNA repair pr 77.3 8.5 0.00029 33.0 7.9 106 109-224 197-327 (345)
15 3i3q_A Alpha-ketoglutarate-dep 75.2 15 0.00052 29.0 8.4 81 110-206 105-200 (211)
16 2p17_A Pirin-like protein; GK1 51.7 9.7 0.00033 31.5 3.1 21 123-143 48-68 (277)
17 1e5r_A Proline oxidase; oxidor 32.2 49 0.0017 27.5 4.4 21 187-207 155-175 (290)
18 2vf9_A Coat protein; virion, R 30.8 12 0.0004 25.7 0.2 19 176-194 48-66 (131)
19 3nrl_A Uncharacterized protein 29.2 9.3 0.00032 25.4 -0.5 19 171-189 31-49 (81)
20 2opw_A Phyhd1 protein; double- 23.0 2.1E+02 0.0072 22.8 6.7 33 188-220 244-277 (291)
21 2da7_A Zinc finger homeobox pr 21.3 69 0.0024 20.7 2.6 29 78-107 15-55 (71)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=8.2e-65 Score=447.71 Aligned_cols=230 Identities=26% Similarity=0.467 Sum_probs=209.0
Q ss_pred cccccCCChhhHH---HHHHHHhcCCHHHHhccccCCCCCCcccCccCcccCcccCCCceeeeccccccch-hhhcCCCh
Q 046644 2 LETQEGVSRRIYP---FRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEE-EIAAFWPS 77 (234)
Q Consensus 2 ~~~nhGi~~~~~~---~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~ 77 (234)
.++||||++++++ +++++||+||.|+|+++........++||+........+..||+|.|+++..|.. ...|.||+
T Consensus 81 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~ 160 (356)
T 1gp6_A 81 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK 160 (356)
T ss_dssp EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCC
Confidence 5799999999998 4678999999999999987532135889987655555678899999999876653 46789998
Q ss_pred ---HHHHHHHHHHHH------------hhcCCCCchhhHHHHhh---cCcceeEEeecCCCCCCCCcccccCCCCCCCeE
Q 046644 78 ---VCKDEMLEYTKS------------SEGLNVKRIDEIRALML---LGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFT 139 (234)
Q Consensus 78 ---~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT 139 (234)
+||+++++|+++ |++|||+ +++|.+.+. .+.+.||++|||||+.++..+|+++|||+|+||
T Consensus 161 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 999999999998 9999999 999999987 478899999999999988899999999999999
Q ss_pred EEeeCCCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCCCCeeEEEeeecCCCCc-eEecC
Q 046644 140 ILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEG-ILCPF 218 (234)
Q Consensus 140 lL~qd~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~ 218 (234)
||+||+++||||+++| +|++|+|+||++||||||+||+||||+||||+|||+.++.++|||++||++|+.|+ +|.|+
T Consensus 240 lL~qd~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl 317 (356)
T 1gp6_A 240 FILHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 317 (356)
T ss_dssp EEEECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred EEEEcCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence 9999999999999999 99999999999999999999999999999999999998888999999999999999 99999
Q ss_pred ccccCCCCCCCCCCCC
Q 046644 219 PEVLANGKKPLYKPVL 234 (234)
Q Consensus 219 ~~~~~~~~p~~y~~~~ 234 (234)
++|+++++|++|+++|
T Consensus 318 ~~~~~~~~p~~y~~~t 333 (356)
T 1gp6_A 318 PEMVSVESPAKFPPRT 333 (356)
T ss_dssp GGGCCSSSCCSSCCEE
T ss_pred hhhcCCCCCccCCCcc
Confidence 9999999999999875
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=9.1e-64 Score=434.15 Aligned_cols=228 Identities=18% Similarity=0.225 Sum_probs=199.5
Q ss_pred cccccCCChhhHH---HHHHHHhcCCHHHHhccccCCCCCCcccCccCcccC--cccCCCceeeeccccc-cc----h--
Q 046644 2 LETQEGVSRRIYP---FRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLH--AERALEWKDFLSMFYV-SE----E-- 69 (234)
Q Consensus 2 ~~~nhGi~~~~~~---~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~E~~~~~~~-p~----~-- 69 (234)
.++||||++++++ +++++||+||.|+|+++... . ..++||.+.+... .....||+|.|.++.. +. .
T Consensus 37 ~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~-~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~ 114 (312)
T 3oox_A 37 VLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-K-GGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAH 114 (312)
T ss_dssp EEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-G-GGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-C-CCccccccccceecCCCCCCCceeeeEeecCCCcCCcchhc
Confidence 5799999999998 46789999999999999875 2 4688997654322 2356899999998642 21 1
Q ss_pred hhhcCCCh---HHHHHHHHHHHH------------hhcCCCCchhhHHHHhhcCcceeEEeecCCCCCCCCcccccCCCC
Q 046644 70 EIAAFWPS---VCKDEMLEYTKS------------SEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSD 134 (234)
Q Consensus 70 ~~~~~wP~---~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD 134 (234)
..+|.||+ +||+++++|+++ |++|||+ +++|.+.+..+.+.+|++|||||+.++..+|+++|||
T Consensus 115 ~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD 193 (312)
T 3oox_A 115 MADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE-RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGD 193 (312)
T ss_dssp SCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECC
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceec
Confidence 34689997 899999999987 9999999 9999999988889999999999988655599999999
Q ss_pred CCCeEEEeeCCCCceEEE-eCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCC----CCCeeEEEeeecC
Q 046644 135 ISTFTILLQDDIGGLHVR-KDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANG----SQNMILVLLFVNP 209 (234)
Q Consensus 135 ~g~lTlL~qd~~~GLqV~-~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~----~~~R~Si~~F~~P 209 (234)
+|+||||+||+++||||+ ++| +|++|+|+||++||||||+||+||||+||||.|||+.++ ..+|||++||++|
T Consensus 194 ~g~lTlL~qd~v~GLqV~~~~g--~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P 271 (312)
T 3oox_A 194 INTITLLLGAEEGGLEVLDRDG--QWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHF 271 (312)
T ss_dssp CSSEEEEECCTTSCEEEECTTS--CEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECC
T ss_pred CceEEEEeEcCcCceEEECCCC--cEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecC
Confidence 999999999999999998 788 999999999999999999999999999999999998764 4579999999999
Q ss_pred CCCceEecCccccCCCCCCCCC-CCC
Q 046644 210 KPEGILCPFPEVLANGKKPLYK-PVL 234 (234)
Q Consensus 210 ~~d~~i~p~~~~~~~~~p~~y~-~~~ 234 (234)
+.|++|+|+++|+++++|++|+ ++|
T Consensus 272 ~~d~~i~pl~~~v~~~~p~~y~~~~t 297 (312)
T 3oox_A 272 ASDYEIKTLQNCVTAENPDRYPESIT 297 (312)
T ss_dssp CTTCEECCCGGGCCSSSCCSCSSCEE
T ss_pred CCCcEEecCccccCCCCcccCCCCee
Confidence 9999999999999999999999 874
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3.1e-63 Score=431.62 Aligned_cols=222 Identities=20% Similarity=0.373 Sum_probs=195.2
Q ss_pred cccccCCChhhHH---HHHHHHhcCCHHHHhccccCCCCCCcccCccCcccCcccCCCceeeeccccccchhhhcCCCh-
Q 046644 2 LETQEGVSRRIYP---FRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPS- 77 (234)
Q Consensus 2 ~~~nhGi~~~~~~---~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~- 77 (234)
.++||||++++++ +++++||+||.|+|+++... .+||.... .+.+..||+|.|.+...|. ...|.||+
T Consensus 35 ~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~~~--~e~~~~d~ke~~~~~~~p~-~~~~~wP~~ 106 (319)
T 1w9y_A 35 ELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEGVQ--AEVTDMDWESTFFLKHLPI-SNISEVPDL 106 (319)
T ss_dssp EEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCC--CCGGGCCCCEEEEEEEESC-CGGGGCTTC
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCccc--ccCCCCChhhheeeecCCc-ccccccccc
Confidence 5799999999999 46789999999999998642 34786542 2346789999999987654 25688997
Q ss_pred --HHHHHHHHHHHH------------hhcCCCCchhhHHHHhhc---CcceeEEeecCCCCCCCCcccccCCCCCCCeEE
Q 046644 78 --VCKDEMLEYTKS------------SEGLNVKRIDEIRALMLL---GSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTI 140 (234)
Q Consensus 78 --~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTl 140 (234)
+||+++++|+++ |++|||+ +++|.+.+.. +.+.+|++|||||+.++..+|+++|||+|+|||
T Consensus 107 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl 185 (319)
T 1w9y_A 107 DEEYREVMRDFAKRLEKLAEELLDLLCENLGLE-KGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIIL 185 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-TTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEE
Confidence 899999999998 8999999 9999998873 567899999999999888899999999999999
Q ss_pred EeeC-CCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCCCCeeEEEeeecCCCCceEecCc
Q 046644 141 LLQD-DIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFP 219 (234)
Q Consensus 141 L~qd-~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~ 219 (234)
|+|| +++||||+++| +|++|+|+||++||||||+||+||||+|||+.|||+.++.++|||++||++|+.|++|.|++
T Consensus 186 L~qd~~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~ 263 (319)
T 1w9y_A 186 LFQDDKVSGLQLLKDG--QWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAP 263 (319)
T ss_dssp EEESSSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCG
T ss_pred EEecCCCCeeeEeeCC--eEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCch
Confidence 9995 79999999999 99999999999999999999999999999999999999888999999999999999999999
Q ss_pred cccCCC---CCCCCCCCC
Q 046644 220 EVLANG---KKPLYKPVL 234 (234)
Q Consensus 220 ~~~~~~---~p~~y~~~~ 234 (234)
+|++++ +|++|+++|
T Consensus 264 ~l~~~~~~~~p~~Y~~~t 281 (319)
T 1w9y_A 264 ALVEKEAEENKQVYPKFV 281 (319)
T ss_dssp GGC--------CCCCCEE
T ss_pred hhcCcccccCccccCcEe
Confidence 999988 699999875
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.8e-60 Score=413.12 Aligned_cols=219 Identities=14% Similarity=0.164 Sum_probs=182.9
Q ss_pred cccccCCChhhHH---HHHHHHhcCC-HHHHhccccCCCCCCcccCccCccc------CcccCCCceeeeccccccchhh
Q 046644 2 LETQEGVSRRIYP---FRYVAYAGEW-SKEKRKYSKENSPTNNARFGSSFVL------HAERALEWKDFLSMFYVSEEEI 71 (234)
Q Consensus 2 ~~~nhGi~~~~~~---~~~~~fF~lP-~e~K~~~~~~~~~~~~~Gy~~~~~~------~~~~~~d~~E~~~~~~~p~~~~ 71 (234)
.++||||++++++ +++++||+|| .|+|+++..... ..++||...+.+ ...+..||+|+|+++..
T Consensus 33 ~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----- 106 (311)
T 1dcs_A 33 YLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTA----- 106 (311)
T ss_dssp EEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEEEC-----------------CEEEEECSS-----
T ss_pred EEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCceeeccccccccccCCCCCCCcceeeeccCC-----
Confidence 5799999999998 4678999999 999999987643 468999876433 22467899999999754
Q ss_pred hcCCCh-HHHHHHHHHHHH------------hhcCCC----CchhhHHHHhhcCcceeEEeecCCCCCCC--C--ccccc
Q 046644 72 AAFWPS-VCKDEMLEYTKS------------SEGLNV----KRIDEIRALMLLGSRRVNLNYYPMCPNPE--H--TVGVG 130 (234)
Q Consensus 72 ~~~wP~-~f~~~~~~y~~~------------a~~Lgl----~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~ 130 (234)
+|.||. +|++++++|+++ |++||| + +++|.+. .+.+|++|||||+.++ . .+|++
T Consensus 107 ~n~wP~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~-~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~ 181 (311)
T 1dcs_A 107 DNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG-VEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMA 181 (311)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC-HHHHHSC----CCEEEEEEECC-----------CCEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc-HhHHhhc----chhhheecCCCCCcccccCccccccc
Confidence 478986 999999999998 899999 7 7887754 7899999999998763 3 67899
Q ss_pred CCCCCCCeEEEeeC-CCCc---eEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCC-----CCCee
Q 046644 131 RHSDISTFTILLQD-DIGG---LHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANG-----SQNMI 201 (234)
Q Consensus 131 ~HtD~g~lTlL~qd-~~~G---LqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~-----~~~R~ 201 (234)
+|||+|+||||+|| +++| |||+.+| +|++|+|+||++||||||+||+||||+||||.|||+.++ .++||
T Consensus 182 ~HtD~g~lTlL~qd~~v~G~~~LqV~~~g--~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~ 259 (311)
T 1dcs_A 182 PHYDLSMVTLIQQTPCANGFVSLQAEVGG--AFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRT 259 (311)
T ss_dssp EEEECSSEEEEEEECCTTCCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEE
T ss_pred cccCCCeEEEEecCCCCCCceeEEEEeCC--EEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeE
Confidence 99999999999999 8999 9999988 999999999999999999999999999999999999987 67899
Q ss_pred EEEeeecCCCCceEecCccccCCCCCCCC--CCCC
Q 046644 202 LVLLFVNPKPEGILCPFPEVLANGKKPLY--KPVL 234 (234)
Q Consensus 202 Si~~F~~P~~d~~i~p~~~~~~~~~p~~y--~~~~ 234 (234)
|++||++|+.|++|. +++++++++|++| +++|
T Consensus 260 Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t 293 (311)
T 1dcs_A 260 SSVFFLRPNADFTFS-VPLARECGFDVSLDGETAT 293 (311)
T ss_dssp EEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEE
T ss_pred EEEEEEcCCCCcEEe-CCcccCCCCccccCCCCcc
Confidence 999999999999999 9999999999999 8764
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.3e-57 Score=398.34 Aligned_cols=218 Identities=16% Similarity=0.170 Sum_probs=189.2
Q ss_pred cccccCCChhhHH---HHHHHH-hcCCHHHHhccccCCCCCCcccCccCccc--Cc------ccCCCceeeeccccccc-
Q 046644 2 LETQEGVSRRIYP---FRYVAY-AGEWSKEKRKYSKENSPTNNARFGSSFVL--HA------ERALEWKDFLSMFYVSE- 68 (234)
Q Consensus 2 ~~~nhGi~~~~~~---~~~~~f-F~lP~e~K~~~~~~~~~~~~~Gy~~~~~~--~~------~~~~d~~E~~~~~~~p~- 68 (234)
.++|||| +++ +++++| |+||.|+|+++.. +||...+.. .. .+..||+|.|+++..+.
T Consensus 43 ~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-------~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~ 112 (331)
T 1odm_A 43 YAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-------RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTP 112 (331)
T ss_dssp EEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCT
T ss_pred EEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------cCCCcCCccccccccccccCCCCChhheEecccCCcc
Confidence 5789999 666 568899 9999999999864 466543321 11 15789999999975421
Q ss_pred ----------hhhhcCCCh-----HHHHHHHHHHHH------------hhcCCCCchhhHHHHhhcCcceeE--EeecC-
Q 046644 69 ----------EEIAAFWPS-----VCKDEMLEYTKS------------SEGLNVKRIDEIRALMLLGSRRVN--LNYYP- 118 (234)
Q Consensus 69 ----------~~~~~~wP~-----~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~~~~~~lr--~~~Yp- 118 (234)
...+|.||+ +||+++++|+++ |++|||+ +++|.+.+..+.+.+| ++|||
T Consensus 113 ~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~lr~~l~~YP~ 191 (331)
T 1odm_A 113 DHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKE-ENFFARHFKPDDTLASVVLIRYPY 191 (331)
T ss_dssp TSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTTGGGCCTTTCCCEEEEEEECC
T ss_pred ccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHhcCcHHHHHHHHhhCCC
Confidence 024689996 799999999988 9999999 9999999888889999 99999
Q ss_pred -----C---CCCCCC-cccccCCCCCCCeEEEeeCCCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceeccc
Q 046644 119 -----M---CPNPEH-TVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIE 189 (234)
Q Consensus 119 -----~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~ 189 (234)
| |++++. .+|+++|||+|+||||+||+++||||+..+ .|++|+|+||++||||||+||+||||+||||.
T Consensus 192 ~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~--gWi~V~p~pgalvVNiGD~l~~~TnG~~kS~~ 269 (331)
T 1odm_A 192 LDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAA--GYQDIEADDTGYLINCGSYMAHLTNNYYKAPI 269 (331)
T ss_dssp CSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETT--EEEECCCCTTSEEEEECHHHHHHTTTSSCCCC
T ss_pred cccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCC--CeEECCCCCCeEEEEccHHHHHHhCCEeeCCC
Confidence 7 777776 899999999999999999999999999544 39999999999999999999999999999999
Q ss_pred ceeecCCCCCeeEEEeeecCCCCceEecCccccCCCCCCCCCCCC
Q 046644 190 YCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL 234 (234)
Q Consensus 190 HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~p~~y~~~~ 234 (234)
|||+.+ .++|||++||++|+.|++|.|+++++++++ ++|++++
T Consensus 270 HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t 312 (331)
T 1odm_A 270 HRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLS 312 (331)
T ss_dssp EEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCB
T ss_pred ceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCcc
Confidence 999864 789999999999999999999999999888 8999985
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-54 Score=371.25 Aligned_cols=204 Identities=20% Similarity=0.290 Sum_probs=169.3
Q ss_pred cccccCCChhhHHH---HHHHHhcCCHHHHhccccCCCCCCcccCccCc-ccC--cccCCCceeeeccccccchhhhcCC
Q 046644 2 LETQEGVSRRIYPF---RYVAYAGEWSKEKRKYSKENSPTNNARFGSSF-VLH--AERALEWKDFLSMFYVSEEEIAAFW 75 (234)
Q Consensus 2 ~~~nhGi~~~~~~~---~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~-~~~--~~~~~d~~E~~~~~~~p~~~~~~~w 75 (234)
.++|||||++++++ ++++||+| |+|+++.... ..++||.... ... .....||+|.|.+.. ...|
T Consensus 29 ~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~--~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~p------~~~~ 98 (280)
T 3on7_A 29 VLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR--ETHDGFFPASISETAKGHTVKDIKEYYHVYP------WGRI 98 (280)
T ss_dssp EEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT--TTCCEEECCC--------CCCCSCEEEEECT------TSCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC--CCCCccccCccccccCCCCcccHHHHHhcCC------CCCC
Confidence 57999999999984 67899998 8999987643 4689998653 211 234679999997741 1235
Q ss_pred ChHHHHHHHHHHHH------------hhcCCCCch--hh---HHHHhhcCc-ceeEEeecCCCCCCC--CcccccCCCCC
Q 046644 76 PSVCKDEMLEYTKS------------SEGLNVKRI--DE---IRALMLLGS-RRVNLNYYPMCPNPE--HTVGVGRHSDI 135 (234)
Q Consensus 76 P~~f~~~~~~y~~~------------a~~Lgl~~~--~~---~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~g~~~HtD~ 135 (234)
|.+||+++++|+++ |++||++ . ++ |.+.+.++. +.+|++|||||+.++ ..+|+++|||+
T Consensus 99 p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~ 177 (280)
T 3on7_A 99 PDSLRANILAYYEKANTLASELLEWIETYSPDE-IKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDI 177 (280)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHH-HHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCC
Confidence 55999999999998 7777765 2 22 666666654 899999999998765 47899999999
Q ss_pred CCeEEEeeCCCCceEEE-eCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCC----CCCeeEEEeeecCC
Q 046644 136 STFTILLQDDIGGLHVR-KDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANG----SQNMILVLLFVNPK 210 (234)
Q Consensus 136 g~lTlL~qd~~~GLqV~-~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~----~~~R~Si~~F~~P~ 210 (234)
|+||||+||+++||||+ ++| +|++|+|+||++||||||+||+||||+||||.|||+.++ ..+|||++||++|+
T Consensus 178 g~lTlL~qd~~~GLqV~~~~g--~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 178 NLITVLPTANEPGLQVKAKDG--SWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp SSEEEEECCSCCCEEEECTTS--CEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred CeEEEEEecCCCCeEEEcCCC--CEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 99999999999999999 688 999999999999999999999999999999999999874 45899999999999
Q ss_pred CCceEecC
Q 046644 211 PEGILCPF 218 (234)
Q Consensus 211 ~d~~i~p~ 218 (234)
.|++|+|.
T Consensus 256 ~d~~i~p~ 263 (280)
T 3on7_A 256 PSVVLSER 263 (280)
T ss_dssp TTCBCSSS
T ss_pred CCCEECCC
Confidence 99999873
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.01 E-value=0.43 Score=39.05 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=52.9
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCCC-----------CeEEEee--C----CCCceEEEeCCCCceEEEeecCCeEEE
Q 046644 109 SRRVNLNYYPMCPNPEHTVGVGRHSDIS-----------TFTILLQ--D----DIGGLHVRKDNGNGWIHVSLISRSFII 171 (234)
Q Consensus 109 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~~GLqV~~~g~~~W~~V~p~pg~~vV 171 (234)
..-+++++|.+.. -..+|.|.. .+|+++. + +.|.|.+.... .=..|+|..|.+|+
T Consensus 98 ~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~--~~~~V~P~~G~~v~ 169 (243)
T 3dkq_A 98 FYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTY--GQQSIKLSAGSLVL 169 (243)
T ss_dssp EEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETT--EEEEECCCTTCEEE
T ss_pred cccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCC--CcEEEecCCCEEEE
Confidence 3458899996532 245666653 3455544 3 12336555443 33679999999998
Q ss_pred EecchhhhhhCCceecccceeecCCCCCeeEEEeeec
Q 046644 172 NIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVN 208 (234)
Q Consensus 172 nvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~ 208 (234)
.-. .++|+|.......|++++.+++
T Consensus 170 F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 170 YPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ECC------------CCeEcCccccccCEEEEEEehh
Confidence 642 3689998766678999998876
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=92.24 E-value=0.66 Score=37.93 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=55.3
Q ss_pred eeEEeecCCCCCCCCcccccCCCCCC-----CeEEEee--CC------CCceEEEeCCCCceEEEeecCCeEEEEecchh
Q 046644 111 RVNLNYYPMCPNPEHTVGVGRHSDIS-----TFTILLQ--DD------IGGLHVRKDNGNGWIHVSLISRSFIINIWDPL 177 (234)
Q Consensus 111 ~lr~~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~q--d~------~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l 177 (234)
-+.+.+|++. .-...+|.|.. .+|+++. ++ .|-|.+...+.+....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3678889751 12356777763 5777765 21 2336777543235689999999999886431
Q ss_pred hhhhCCceecccceeecCCCCCeeEEEeeecC
Q 046644 178 QIISKGRHKSIEYCVIANGSQNMILVLLFVNP 209 (234)
Q Consensus 178 ~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P 209 (234)
-.+|.|.. ..+.|+||+.+++-
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEcC
Confidence 15899976 45799999987653
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.54 E-value=0.87 Score=36.40 Aligned_cols=42 Identities=12% Similarity=-0.115 Sum_probs=33.2
Q ss_pred ceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCC-CCeeEEEeeecCCC
Q 046644 158 GWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGS-QNMILVLLFVNPKP 211 (234)
Q Consensus 158 ~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~-~~R~Si~~F~~P~~ 211 (234)
.+..|.|.+|.+||.-.. -.|.|..... ++|+||+|-+.+..
T Consensus 167 ~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 677899999999987654 3799988654 68999999988765
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=88.23 E-value=4.4 Score=32.75 Aligned_cols=86 Identities=13% Similarity=0.052 Sum_probs=52.0
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCCC--------CeEEEeeCCCCceEEEeCCC---------CceEEEeecCCeEEEE
Q 046644 110 RRVNLNYYPMCPNPEHTVGVGRHSDIS--------TFTILLQDDIGGLHVRKDNG---------NGWIHVSLISRSFIIN 172 (234)
Q Consensus 110 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~~g~---------~~W~~V~p~pg~~vVn 172 (234)
..+-+|+|.+.. -++++|.|-- ..||=+.. ..=+.+..... ...+.+...+|+++|+
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 456789996532 2688888842 22333321 12244432210 2689999999999999
Q ss_pred ecchhhhhhCCceecccceeecCCCCCeeEEEeee
Q 046644 173 IWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFV 207 (234)
Q Consensus 173 vGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~ 207 (234)
-|++=..|.-|.-+.. .....|+|+.|=.
T Consensus 200 ~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 200 EGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp EETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred ChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 9997666654433211 1246899998744
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=84.35 E-value=6.6 Score=30.89 Aligned_cols=82 Identities=10% Similarity=0.025 Sum_probs=50.1
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCCC--------CeEEEeeCCCCceEEEeCC--------CCceEEEeecCCeEEEEe
Q 046644 110 RRVNLNYYPMCPNPEHTVGVGRHSDIS--------TFTILLQDDIGGLHVRKDN--------GNGWIHVSLISRSFIINI 173 (234)
Q Consensus 110 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~~g--------~~~W~~V~p~pg~~vVnv 173 (234)
..+-+|+|.+.. -++++|.|-- .+++=+. ...=+.+.... ....+.+...+|+++|+-
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 345689996532 2578888862 1233222 11334444211 114688999999999999
Q ss_pred cchhhhhhCCceecccceeecCC--CCCeeEEEe
Q 046644 174 WDPLQIISKGRHKSIEYCVIANG--SQNMILVLL 205 (234)
Q Consensus 174 Gd~l~~~SnG~~~s~~HRV~~~~--~~~R~Si~~ 205 (234)
|++=..|. |.|-... ...|+|+.|
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEE
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEe
Confidence 98766665 4443322 357999987
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=82.73 E-value=2 Score=34.36 Aligned_cols=87 Identities=10% Similarity=0.001 Sum_probs=53.9
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCCC-----------CeEEEee--C-CCCceEEEeCCCCceEEEeecCCeEEEEecc
Q 046644 110 RRVNLNYYPMCPNPEHTVGVGRHSDIS-----------TFTILLQ--D-DIGGLHVRKDNGNGWIHVSLISRSFIINIWD 175 (234)
Q Consensus 110 ~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd 175 (234)
-.+++++|.+... ..+|.|+. .+|+++. | ..||==+.... =+.|.|..|.+|+.-.-
T Consensus 111 E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~---~~~V~P~~G~al~f~~~ 181 (216)
T 3itq_A 111 EGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL---NLSVHPRKGMAVYFEYF 181 (216)
T ss_dssp CCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT---TEEECCCTTCEEEEECC
T ss_pred cceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC---CCEEecCCCeEEEEecc
Confidence 3588889964322 46777764 3677665 3 22342233222 27899999998876531
Q ss_pred hhhhhhCCc-eecccceeecCCCCCeeEEEeeecC
Q 046644 176 PLQIISKGR-HKSIEYCVIANGSQNMILVLLFVNP 209 (234)
Q Consensus 176 ~l~~~SnG~-~~s~~HRV~~~~~~~R~Si~~F~~P 209 (234)
..+|. -..++|+|.......|+++..+++-
T Consensus 182 ----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 182 ----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred ----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 11222 2467999987666789999888763
No 13
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=77.72 E-value=4.6 Score=32.04 Aligned_cols=48 Identities=6% Similarity=-0.051 Sum_probs=34.6
Q ss_pred eEEEeecCCeEEEEecchhhhhhCCce-ecccceeecCCCCCeeEEEeeecCC
Q 046644 159 WIHVSLISRSFIINIWDPLQIISKGRH-KSIEYCVIANGSQNMILVLLFVNPK 210 (234)
Q Consensus 159 W~~V~p~pg~~vVnvGd~l~~~SnG~~-~s~~HRV~~~~~~~R~Si~~F~~P~ 210 (234)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3899999999888643 1123332 5789999776567899999888644
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=77.35 E-value=8.5 Score=32.96 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=63.2
Q ss_pred cceeEEeecCCCCCCCCcccccCCCCCC------CeEEEeeCCCCceEEEe-CCCCceEEEeecCCeEEEEecchhhhhh
Q 046644 109 SRRVNLNYYPMCPNPEHTVGVGRHSDIS------TFTILLQDDIGGLHVRK-DNGNGWIHVSLISRSFIINIWDPLQIIS 181 (234)
Q Consensus 109 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqV~~-~g~~~W~~V~p~pg~~vVnvGd~l~~~S 181 (234)
...+-+|+|.+. -++++|.|-. .+|+=+. ...-+.+.. ++ .++.+...+|+++|+-|++=..|.
T Consensus 197 ~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~--~~~~l~L~~gsLlvM~G~~r~~w~ 267 (345)
T 3tht_A 197 PDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDG--IAVPVMLPRRSLLVMTGESRYLWT 267 (345)
T ss_dssp CSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTS--CEEEEEECTTEEEEECTHHHHTSE
T ss_pred CCEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCC--ceEEEEcCCCcEEEEChHHhhceE
Confidence 356778999652 2788999874 2222221 212344443 45 789999999999999999888886
Q ss_pred CCceecccceee------------------cCCCCCeeEEEeeecCCCCceEecCccccCC
Q 046644 182 KGRHKSIEYCVI------------------ANGSQNMILVLLFVNPKPEGILCPFPEVLAN 224 (234)
Q Consensus 182 nG~~~s~~HRV~------------------~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~ 224 (234)
-|.-+-...-+- ..+...|+|+.|=.-+...+ =+..++++|.
T Consensus 268 H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c-~C~~~~~cd~ 327 (345)
T 3tht_A 268 HGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPC-NCSYPLVCDS 327 (345)
T ss_dssp EEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCC-CCSCTTTCTT
T ss_pred ccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCc-CCCCCCcccC
Confidence 654433222211 01124699998765554422 2334455554
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=75.19 E-value=15 Score=29.00 Aligned_cols=81 Identities=7% Similarity=-0.016 Sum_probs=49.6
Q ss_pred ceeEEeecCCCCCCCCcccccCCCCC-----C--CeEEEeeCCCCceEEEe-CCCCceEEEeecCCeEEEEecchhhhhh
Q 046644 110 RRVNLNYYPMCPNPEHTVGVGRHSDI-----S--TFTILLQDDIGGLHVRK-DNGNGWIHVSLISRSFIINIWDPLQIIS 181 (234)
Q Consensus 110 ~~lr~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~~-~g~~~W~~V~p~pg~~vVnvGd~l~~~S 181 (234)
..+-+|+|.+. . ++++|.|- + .+|+-+.. ..-+.+.. ..++..+.+...+|+++|+-|++ +.|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~- 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF- 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC-
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchH-Hce-
Confidence 35678999642 2 78899993 2 22332321 12344432 22237889999999999998886 222
Q ss_pred CCceecccceeecCCC-------CCeeEEEee
Q 046644 182 KGRHKSIEYCVIANGS-------QNMILVLLF 206 (234)
Q Consensus 182 nG~~~s~~HRV~~~~~-------~~R~Si~~F 206 (234)
.|.|..... ..|+|+.|=
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEee
Confidence 366654332 369999874
No 16
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=51.70 E-value=9.7 Score=31.49 Aligned_cols=21 Identities=29% Similarity=0.344 Sum_probs=17.6
Q ss_pred CCCcccccCCCCCCCeEEEee
Q 046644 123 PEHTVGVGRHSDISTFTILLQ 143 (234)
Q Consensus 123 ~~~~~g~~~HtD~g~lTlL~q 143 (234)
+...++..+|.++-++|++++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 344677889999999999998
No 17
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=32.17 E-value=49 Score=27.47 Aligned_cols=21 Identities=0% Similarity=-0.189 Sum_probs=17.7
Q ss_pred cccceeecCCCCCeeEEEeee
Q 046644 187 SIEYCVIANGSQNMILVLLFV 207 (234)
Q Consensus 187 s~~HRV~~~~~~~R~Si~~F~ 207 (234)
+..|+|.+.+..+|+.+.+=+
T Consensus 155 ~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp TSCEEEEESSSSCCCEEEEEE
T ss_pred CCeeEEEcCCCCCeEEEEEEe
Confidence 458999999999999988655
No 18
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=30.83 E-value=12 Score=25.71 Aligned_cols=19 Identities=37% Similarity=0.361 Sum_probs=15.8
Q ss_pred hhhhhhCCceecccceeec
Q 046644 176 PLQIISKGRHKSIEYCVIA 194 (234)
Q Consensus 176 ~l~~~SnG~~~s~~HRV~~ 194 (234)
.|..-|||+|||++.-|+.
T Consensus 48 slrktsngrykstlklvvp 66 (131)
T 2vf9_A 48 SLRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEEECTTSEEEEEEEEEEE
T ss_pred EEEecCCCceeeeEEEEEE
Confidence 3667799999999988765
No 19
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=29.20 E-value=9.3 Score=25.36 Aligned_cols=19 Identities=5% Similarity=0.074 Sum_probs=14.7
Q ss_pred EEecchhhhhhCCceeccc
Q 046644 171 INIWDPLQIISKGRHKSIE 189 (234)
Q Consensus 171 VnvGd~l~~~SnG~~~s~~ 189 (234)
..+||.||++.+|+|.+|.
T Consensus 31 lHCGE~feV~v~~~WiptR 49 (81)
T 3nrl_A 31 LHCGECFDVKVKDVWVPVR 49 (81)
T ss_dssp CCTTCEEEEEETTEEEEEE
T ss_pred cccccEEEEEECCEEEEEE
Confidence 4578888888888888763
No 20
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=23.01 E-value=2.1e+02 Score=22.76 Aligned_cols=33 Identities=6% Similarity=-0.154 Sum_probs=23.8
Q ss_pred ccceeecCC-CCCeeEEEeeecCCCCceEecCcc
Q 046644 188 IEYCVIANG-SQNMILVLLFVNPKPEGILCPFPE 220 (234)
Q Consensus 188 ~~HRV~~~~-~~~R~Si~~F~~P~~d~~i~p~~~ 220 (234)
++|+...+. ...|.++.+-+.+..++...+-.-
T Consensus 244 ~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~~ 277 (291)
T 2opw_A 244 VVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENW 277 (291)
T ss_dssp CEEEECCBCSSSCCCEEEEEEEECTTCEECTTSS
T ss_pred ceecCCCCCCCCceEEEEEEEEcCCCCccCcccc
Confidence 688887654 357999998888876677765443
No 21
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.31 E-value=69 Score=20.67 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHH------------hhcCCCCchhhHHHHhhc
Q 046644 78 VCKDEMLEYTKS------------SEGLNVKRIDEIRALMLL 107 (234)
Q Consensus 78 ~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~~ 107 (234)
.-+.+++.|+.. |+.+||+ .+...-.|.+
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~-~~VVrVWFqN 55 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLP-QEFVKEWFEQ 55 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-HHHHHHHHhh
Confidence 345556666555 9999999 8888877754
Done!