STRING 9.05 
  AT4G13990 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G13990
exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- biological_process unknown; LOCATED IN- cell wall, membrane; EXPRESSED IN- 18 plant structures; EXPRESSED DURING- 7 growth stages; CONTAINS InterPro DOMAIN/s- Exostosin-like (InterPro-IPR004263); BEST Arabidopsis thaliana protein match is- MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups (TAIR-AT2G20370.1); Has 305 Blast hits to 304 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 286; Viruses - 0; Other Eukaryotes - 11 (source- NCBI B [...] (521 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
LCR75
LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75); Encodes a member of a family of small,secreted, [...] (82 aa)
       0.819
AT4G14050
pentatricopeptide (PPR) repeat-containing protein; pentatricopeptide (PPR) repeat-containing pr [...] (612 aa)
       0.788
AtCXE5
AtCXE5 (Arabidopsis thaliana carboxyesterase 5); carboxylesterase; Encodes a protein with carbo [...] (319 aa)
       0.679
AT3G14067
subtilase family protein; subtilase family protein; FUNCTIONS IN- identical protein binding, se [...] (777 aa)
       0.623
PBF1
PBF1; peptidase/ threonine-type endopeptidase; Encodes 20S proteasome beta subunit PBF1 (PBF1). [...] (223 aa)
       0.599
AT3G26430
GDSL-motif lipase/hydrolase family protein; GDSL-motif lipase/hydrolase family protein; FUNCTIO [...] (380 aa)
       0.561
AT5G37000
exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED [...] (547 aa)
      0.444
AT5G57500
transferase, transferring glycosyl groups; transferase, transferring glycosyl groups; FUNCTIONS [...] (318 aa)
       0.440
AT4G31350
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (376 aa)
       0.440
AT5G36810
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (62 aa)
       0.439
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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