Query 046652
Match_columns 518
No_of_seqs 244 out of 776
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 03:03:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046652.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046652hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 4.6E-68 9.9E-73 571.4 23.6 383 89-489 67-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 2.9E-53 6.4E-58 429.8 17.2 284 91-438 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 3.4E-23 7.4E-28 217.3 15.2 313 110-486 175-528 (907)
4 KOG1022 Acetylglucosaminyltran 99.2 1.2E-10 2.6E-15 123.4 13.9 236 168-451 132-383 (691)
5 PF00852 Glyco_transf_10: Glyc 95.2 0.036 7.7E-07 58.5 6.2 69 326-396 190-261 (349)
6 cd03814 GT1_like_2 This family 95.1 0.079 1.7E-06 53.3 8.1 95 357-459 258-352 (364)
7 cd03794 GT1_wbuB_like This fam 94.3 0.22 4.8E-06 50.0 9.2 93 357-459 286-386 (394)
8 cd03822 GT1_ecORF704_like This 93.7 0.29 6.3E-06 49.3 8.8 92 357-459 259-354 (366)
9 cd03808 GT1_cap1E_like This fa 92.9 0.87 1.9E-05 45.1 10.6 87 357-453 255-343 (359)
10 PLN02871 UDP-sulfoquinovose:DA 92.6 0.7 1.5E-05 50.2 10.2 96 357-461 323-422 (465)
11 cd03807 GT1_WbnK_like This fam 91.7 0.91 2E-05 45.2 9.1 91 357-459 260-353 (365)
12 cd03820 GT1_amsD_like This fam 91.6 0.51 1.1E-05 46.5 7.1 94 357-459 244-339 (348)
13 cd04962 GT1_like_5 This family 91.6 1.4 3E-05 45.2 10.4 93 357-459 262-357 (371)
14 cd03801 GT1_YqgM_like This fam 91.4 0.19 4.2E-06 49.7 3.8 94 356-459 266-362 (374)
15 PF00534 Glycos_transf_1: Glyc 91.2 0.078 1.7E-06 48.6 0.7 85 357-451 84-170 (172)
16 cd03809 GT1_mtfB_like This fam 90.7 0.5 1.1E-05 47.6 6.2 92 357-460 264-357 (365)
17 cd03800 GT1_Sucrose_synthase T 90.7 0.79 1.7E-05 47.3 7.7 92 358-459 295-389 (398)
18 cd03818 GT1_ExpC_like This fam 90.6 0.92 2E-05 47.8 8.2 95 357-459 292-387 (396)
19 cd03823 GT1_ExpE7_like This fa 90.2 1.3 2.9E-05 44.2 8.6 88 357-452 254-342 (359)
20 cd03806 GT1_ALG11_like This fa 89.7 1.7 3.6E-05 46.8 9.4 139 309-460 273-414 (419)
21 PRK09814 beta-1,6-galactofuran 89.6 0.25 5.3E-06 51.3 2.9 88 358-458 219-317 (333)
22 cd03819 GT1_WavL_like This fam 89.6 2.6 5.5E-05 42.8 10.3 94 356-459 254-352 (355)
23 cd05844 GT1_like_7 Glycosyltra 89.5 1.4 3E-05 45.1 8.3 93 357-459 256-357 (367)
24 cd04951 GT1_WbdM_like This fam 89.4 1.4 3.1E-05 44.6 8.2 94 357-459 254-347 (360)
25 TIGR03449 mycothiol_MshA UDP-N 89.2 1.4 2.9E-05 46.4 8.2 97 357-461 294-390 (405)
26 TIGR03088 stp2 sugar transfera 89.0 2.2 4.8E-05 44.2 9.5 93 357-459 264-359 (374)
27 cd03821 GT1_Bme6_like This fam 88.9 1.3 2.8E-05 44.3 7.4 92 358-459 274-366 (375)
28 PRK15427 colanic acid biosynth 87.2 3.2 6.9E-05 44.4 9.5 92 357-459 290-392 (406)
29 cd03798 GT1_wlbH_like This fam 87.1 2.3 5E-05 42.2 7.9 64 357-426 270-333 (377)
30 PRK00654 glgA glycogen synthas 84.4 4.3 9.3E-05 44.2 8.9 84 360-450 351-442 (466)
31 PRK15484 lipopolysaccharide 1, 83.3 4.6 9.9E-05 42.6 8.4 95 357-460 268-365 (380)
32 cd03817 GT1_UGDG_like This fam 83.2 14 0.0003 36.9 11.5 90 357-457 270-361 (374)
33 PRK14098 glycogen synthase; Pr 82.9 4.1 8.8E-05 45.0 8.0 41 358-398 374-414 (489)
34 TIGR02095 glgA glycogen/starch 82.6 5.1 0.00011 43.6 8.6 87 359-450 359-452 (473)
35 PF12575 DUF3753: Protein of u 82.5 1.1 2.5E-05 36.4 2.5 28 3-30 41-68 (72)
36 cd03804 GT1_wbaZ_like This fam 82.3 1.8 4E-05 44.4 4.8 40 357-398 253-292 (351)
37 KOG2619 Fucosyltransferase [Ca 82.0 31 0.00067 36.9 13.7 154 278-446 167-324 (372)
38 TIGR02149 glgA_Coryne glycogen 80.2 1.7 3.8E-05 45.0 3.8 93 357-459 272-373 (388)
39 PF13524 Glyco_trans_1_2: Glyc 79.9 3.9 8.4E-05 33.8 5.1 71 378-459 11-83 (92)
40 cd04949 GT1_gtfA_like This fam 79.4 1.7 3.7E-05 44.9 3.4 94 357-459 270-365 (372)
41 cd03799 GT1_amsK_like This is 79.1 11 0.00025 37.8 9.3 93 357-459 247-348 (355)
42 cd04955 GT1_like_6 This family 78.3 11 0.00023 38.3 8.8 41 357-398 259-300 (363)
43 PRK14099 glycogen synthase; Pr 77.4 10 0.00022 41.7 8.9 92 358-460 361-466 (485)
44 PHA02844 putative transmembran 76.5 2.3 5E-05 34.7 2.6 32 3-34 41-72 (75)
45 PLN02949 transferase, transfer 76.4 14 0.00029 40.6 9.4 98 357-459 346-443 (463)
46 cd03816 GT1_ALG1_like This fam 75.8 8.8 0.00019 41.1 7.7 89 356-454 305-399 (415)
47 cd03813 GT1_like_3 This family 75.4 12 0.00025 40.9 8.7 90 356-452 361-455 (475)
48 cd03825 GT1_wcfI_like This fam 75.2 37 0.00079 34.3 11.8 87 358-452 257-343 (365)
49 cd03805 GT1_ALG2_like This fam 73.3 18 0.0004 37.4 9.2 93 358-459 292-385 (392)
50 cd03792 GT1_Trehalose_phosphor 73.2 9.8 0.00021 39.6 7.1 93 357-460 265-359 (372)
51 cd03802 GT1_AviGT4_like This f 72.6 4.6 0.0001 40.5 4.3 40 358-398 236-276 (335)
52 cd03795 GT1_like_4 This family 71.4 17 0.00036 36.7 8.1 93 357-459 255-353 (357)
53 PHA02819 hypothetical protein; 71.1 3.8 8.2E-05 33.1 2.6 30 2-31 38-67 (71)
54 cd03791 GT1_Glycogen_synthase_ 68.4 19 0.00041 38.8 8.3 84 359-451 364-457 (476)
55 TIGR03087 stp1 sugar transfera 66.5 6.9 0.00015 41.3 4.3 92 358-460 290-384 (397)
56 cd03811 GT1_WabH_like This fam 66.2 10 0.00022 37.1 5.3 63 358-426 256-318 (353)
57 PHA03054 IMV membrane protein; 66.0 5.2 0.00011 32.4 2.4 28 3-30 41-68 (72)
58 PRK09922 UDP-D-galactose:(gluc 65.8 11 0.00023 39.2 5.5 38 359-397 251-288 (359)
59 cd03796 GT1_PIG-A_like This fa 64.4 14 0.00029 39.0 6.0 41 357-398 261-301 (398)
60 PHA01630 putative group 1 glyc 64.0 6 0.00013 41.3 3.2 41 357-398 201-241 (331)
61 PHA02975 hypothetical protein; 60.4 7.2 0.00016 31.4 2.2 26 6-31 40-65 (69)
62 PRK10307 putative glycosyl tra 60.0 26 0.00057 37.0 7.3 92 357-460 295-395 (412)
63 PHA02650 hypothetical protein; 59.5 7.8 0.00017 32.1 2.4 35 3-37 42-76 (81)
64 TIGR02472 sucr_P_syn_N sucrose 56.8 9.5 0.00021 41.1 3.3 94 359-460 330-428 (439)
65 PHA02692 hypothetical protein; 56.6 11 0.00025 30.4 2.8 28 4-31 39-67 (70)
66 cd03793 GT1_Glycogen_synthase_ 55.7 8.6 0.00019 43.4 2.7 105 357-462 466-576 (590)
67 PLN02939 transferase, transfer 53.9 21 0.00045 42.7 5.5 94 361-461 852-955 (977)
68 cd04946 GT1_AmsK_like This fam 46.8 47 0.001 35.4 6.6 86 359-453 302-391 (407)
69 smart00672 CAP10 Putative lipo 42.2 2.4E+02 0.0052 28.5 10.5 89 304-398 79-177 (256)
70 PF12273 RCR: Chitin synthesis 40.0 21 0.00046 32.1 2.3 25 11-35 4-29 (130)
71 PRK15490 Vi polysaccharide bio 38.8 64 0.0014 36.5 6.2 40 358-398 465-504 (578)
72 cd03812 GT1_CapH_like This fam 37.2 1.2E+02 0.0027 30.4 7.7 42 356-398 257-298 (358)
73 PHA01633 putative glycosyl tra 36.5 24 0.00051 37.2 2.3 40 358-398 216-255 (335)
74 TIGR02468 sucrsPsyn_pln sucros 35.6 70 0.0015 38.8 6.1 92 359-461 561-659 (1050)
75 PHA02691 hypothetical protein; 35.3 34 0.00073 30.1 2.6 53 12-65 3-59 (110)
76 COG1819 Glycosyl transferases, 34.3 3.1E+02 0.0068 29.5 10.5 108 305-426 234-355 (406)
77 KOG1387 Glycosyltransferase [C 32.6 1.9E+02 0.0041 31.0 8.0 90 358-453 349-439 (465)
78 PLN02316 synthase/transferase 30.6 52 0.0011 39.9 4.1 38 361-398 915-952 (1036)
79 PRK13608 diacylglycerol glucos 30.4 1.4E+02 0.0029 31.7 6.9 87 358-455 266-354 (391)
80 TIGR02918 accessory Sec system 30.4 1.2E+02 0.0027 33.6 6.7 94 358-459 385-486 (500)
81 cd01635 Glycosyltransferase_GT 29.8 42 0.00091 30.8 2.6 41 357-398 173-213 (229)
82 cd03788 GT1_TPS Trehalose-6-Ph 28.9 27 0.00059 38.1 1.3 89 357-455 352-444 (460)
83 PF13692 Glyco_trans_1_4: Glyc 28.7 29 0.00063 30.0 1.2 41 357-398 62-103 (135)
84 PF00919 UPF0004: Uncharacteri 27.0 64 0.0014 27.7 3.0 32 155-187 11-43 (98)
85 PRK00726 murG undecaprenyldiph 25.9 1.6E+02 0.0035 30.2 6.4 89 357-451 244-336 (357)
86 PLN02605 monogalactosyldiacylg 23.9 82 0.0018 33.1 3.8 35 358-397 275-309 (382)
87 PLN03194 putative disease resi 23.2 7E+02 0.015 24.2 9.9 148 307-489 26-182 (187)
88 TIGR02400 trehalose_OtsA alpha 22.3 97 0.0021 34.0 4.0 86 356-452 346-436 (456)
89 PHA00350 putative assembly pro 22.1 2.7E+02 0.0058 30.2 7.2 32 2-33 217-250 (399)
90 PRK05749 3-deoxy-D-manno-octul 20.7 72 0.0016 33.9 2.6 108 357-482 311-419 (425)
91 PLN02275 transferase, transfer 20.3 2.2E+02 0.0047 29.8 6.1 76 309-398 261-341 (371)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=4.6e-68 Score=571.43 Aligned_cols=383 Identities=36% Similarity=0.623 Sum_probs=333.5
Q ss_pred CCCCCcceEEEeCCCccccHHHhhcccCCC-CCCCC-CCCCCccCCCCCCCccccchhh---hhccccccccchhhhhHH
Q 046652 89 IDSCLGRYIYIHQLPGRFNQDLLKNCHLLT-PGTDK-NMCPYLGNFGFGPGINEENQEI---VLLNESWFLTNQFLLEVI 163 (518)
Q Consensus 89 ~~~c~g~~IYvYDLP~~Fn~~ll~~c~~~~-~w~~~-~~C~~~~n~G~g~~~~~~~~~~---~~~~~~W~~t~~y~lE~i 163 (518)
...|.+..||||+||+.||.++++.|.... .|..+ .+|.+..|.++|+... +..+ ....++|+.|+||++|.+
T Consensus 67 ~~~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~w~~~~~~~~E~~ 144 (464)
T KOG1021|consen 67 QAICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYV--YHEGNKPLFHTPSWCLTDQYASEGI 144 (464)
T ss_pred hhcccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEE--ecCCCCccccCCCcccccchhHHHH
Confidence 345999999999999999999999998764 34332 3899999888887764 3333 355778999999999999
Q ss_pred HHHhh--ccCccccCCCCCceEEEEeccccccccccccCC---CCccccchHHHHHHHHHhcCccccccCCCCeEEEecc
Q 046652 164 FHNKM--KNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGG---VSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGR 238 (518)
Q Consensus 164 fh~rL--l~s~~rT~DPeeAdlFyVP~y~sl~~~r~~~~~---~~~~~r~~l~~~l~~~L~~~P~WnR~gGrDHf~v~~~ 238 (518)
||++| ..++|||.||++||+||||||+++++.+++..+ .+...++.++.+++.|++++|||||++|+|||||++|
T Consensus 145 ~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~ 224 (464)
T KOG1021|consen 145 FHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACH 224 (464)
T ss_pred HHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCC
Confidence 99999 578999999999999999999999988875542 1223456778889999999999999999999999999
Q ss_pred cccccccCCCCCCCcccccccCcccccceeeeeeccCCCCCeeeCCCCCCCCCCCchhhhhcccccccCCceEEEeccCC
Q 046652 239 IAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAP 318 (518)
Q Consensus 239 ~~wdf~r~~~~~~~wG~~~~~~p~~~N~t~l~~e~~~~~~DvviPy~t~~hP~~~~~~~~w~~~~~~~~R~~L~~FaG~~ 318 (518)
..|++.+. .+|+.+...++++.|.+.+..+..+|.+||+|||++.+||....+. .|+..+...+|++|++|+|++
T Consensus 225 ~~~~~~~~----~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~ 299 (464)
T KOG1021|consen 225 DWGDFRRR----SDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP 299 (464)
T ss_pred cchheeec----cchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc
Confidence 88887664 5699998899999998888888888889999999999999888777 888888889999999999975
Q ss_pred CCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 319 RPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 319 ~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.++.||+.|+++|++.++.+.+++|..|..+|.++..|++.|++|+|||||+||+++|+|+||||.+|||||||+|+
T Consensus 300 ---~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~ 376 (464)
T KOG1021|consen 300 ---AGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG 376 (464)
T ss_pred ---cCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence 68999999999999966778889999988889999999999999999999999999999999999999999999998
Q ss_pred CccccceeecCCCCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHHh-hcceeEEeCCCCCcCCcccHHHHHH
Q 046652 399 TAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVR-LIPSVIYADPRSKLETLEDAFDLAV 477 (518)
Q Consensus 399 ~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~~DAfd~il 477 (518)
.|++|+.|.||++|||+|++++++++ |.++|.+|+.+++.+||+++++ +.+||.+..+ + ....+|||++++
T Consensus 377 ---~~lpf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~-~-~~~~~da~~~~~ 448 (464)
T KOG1021|consen 377 ---IQLPFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP-G-PPKRGDAFHMIL 448 (464)
T ss_pred ---cccCcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC-C-CCCcchhHHHHH
Confidence 46677777899999999999999983 5999999999999999999995 8888888873 1 123499999999
Q ss_pred HHHHHHHHHHHH
Q 046652 478 KGILERIEQVRS 489 (518)
Q Consensus 478 ~~l~~R~~~~r~ 489 (518)
++|+.|+..++.
T Consensus 449 ~~v~~r~~~~~~ 460 (464)
T KOG1021|consen 449 HSLWRRLHKLRS 460 (464)
T ss_pred hhhhhccccccc
Confidence 999999988763
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=2.9e-53 Score=429.80 Aligned_cols=284 Identities=33% Similarity=0.574 Sum_probs=214.9
Q ss_pred CCCcceEEEeCCCccccHHHhhcccCCCCCCCCCCCCCccCCCCCCCccccchhhhhccccccccchhhhhHHHHHhhcc
Q 046652 91 SCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKN 170 (518)
Q Consensus 91 ~c~g~~IYvYDLP~~Fn~~ll~~c~~~~~w~~~~~C~~~~n~G~g~~~~~~~~~~~~~~~~W~~t~~y~lE~ifh~rLl~ 170 (518)
+|.++||||||||++||.+|+..... ....|..+++|++|.+||++|++
T Consensus 1 ~~~~lkVYVY~lp~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~e~~l~~~l~~ 49 (302)
T PF03016_consen 1 SHRGLKVYVYPLPPKFNKDLLDPRED-------------------------------EQCSWYETSQYALEVILHEALLN 49 (302)
T ss_pred CCCCCEEEEEeCCccccccceecccc-------------------------------ccCCCcccccchHHHHHHHHHHh
Confidence 58999999999999999999932110 12345578899999999999999
Q ss_pred CccccCCCCCceEEEEeccccccccccccCCCCc--cccchHHHHHHHHHhcCccccccCCCCeEEEecccccccccCCC
Q 046652 171 YRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVST--LLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTD 248 (518)
Q Consensus 171 s~~rT~DPeeAdlFyVP~y~sl~~~r~~~~~~~~--~~r~~l~~~l~~~L~~~P~WnR~gGrDHf~v~~~~~wdf~r~~~ 248 (518)
|++||.||+|||+||||+|.++.. .+.++ .+. ...+.+...+.++++++|||||++|+||||+.++
T Consensus 50 s~~~T~dp~eAdlF~vP~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~---------- 117 (302)
T PF03016_consen 50 SPFRTDDPEEADLFFVPFYSSCYF-HHWWG-SPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSH---------- 117 (302)
T ss_pred CCcEeCCHHHCeEEEEEccccccc-ccccC-CccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEecc----------
Confidence 999999999999999999998764 11111 111 1334555667778889999999999999999984
Q ss_pred CCCCcccc-cccCcccccceeeee------eccCCC--CCeeeCCCCCCCCCCCchhhhhcccccccCCceEEEeccCCC
Q 046652 249 NESDWGSK-FRFLPESKNMSMLSI------ESSSWN--NDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPR 319 (518)
Q Consensus 249 ~~~~wG~~-~~~~p~~~N~t~l~~------e~~~~~--~DvviPy~t~~hP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~ 319 (518)
+||.+ ....+.+.+.+..++ ...+++ +||++|+.....+... ...+ ......+|++|++|+|.+.
T Consensus 118 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~--~~~~-~~~~~~~R~~l~~f~g~~~ 191 (302)
T PF03016_consen 118 ---DRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPD--WRPW-PQRPPARRPYLLFFAGTIR 191 (302)
T ss_pred ---ccccccccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCC--cccc-ccCCccCCceEEEEeeecc
Confidence 23322 222333433333333 123444 9999999643333221 1111 1234689999999999987
Q ss_pred CC---CChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEec
Q 046652 320 PD---LKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFH 396 (518)
Q Consensus 320 ~~---~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViis 396 (518)
.. +++.+|+.|++.|++.++.. . ..+...+..+.+|.+.|++|+|||+|+|+++++.||+|||++|||||||+
T Consensus 192 ~~~~~~~~~~r~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~ 267 (302)
T PF03016_consen 192 PSSNDYSGGVRQRLLDECKSDPDFR-C---SDGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIIS 267 (302)
T ss_pred ccccccchhhhhHHHHhcccCCcce-e---eecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEec
Confidence 65 45799999999998876631 1 11223456677899999999999999999999999999999999999999
Q ss_pred CCCccccceeecCC----CCCeeEEEEeCCccccccccHHHHHccC
Q 046652 397 PGTAYAQYLWHLPK----NYSSYSLYIPVRDVKDWRVNVNETLVGI 438 (518)
Q Consensus 397 d~~ay~qy~~~LPf----Dw~~fSV~Ipe~dv~~~~~~l~~iL~~I 438 (518)
|+ ++||| ||++|||+|+++++++ |+++|++|
T Consensus 268 d~-------~~lPf~~~ldw~~fsv~v~~~~~~~----l~~iL~~i 302 (302)
T PF03016_consen 268 DD-------YVLPFEDVLDWSRFSVRVPEADLPE----LPEILRSI 302 (302)
T ss_pred Cc-------ccCCcccccCHHHEEEEECHHHHHH----HHHHHhcC
Confidence 98 78999 9999999999999998 99999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.90 E-value=3.4e-23 Score=217.29 Aligned_cols=313 Identities=17% Similarity=0.273 Sum_probs=206.2
Q ss_pred HhhcccCCCCCCCCCCCCCccCCCCCCCccccchhhhh----ccccccccchhhhhHHHHHhhccCccccCCCCCceEEE
Q 046652 110 LLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVL----LNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIY 185 (518)
Q Consensus 110 ll~~c~~~~~w~~~~~C~~~~n~G~g~~~~~~~~~~~~----~~~~W~~t~~y~lE~ifh~rLl~s~~rT~DPeeAdlFy 185 (518)
+...|...++. |+++|...+ |.|+.+ |+.+.. +.+.|. -..|.+.+....+.|+||+.||++.
T Consensus 175 ~~~~c~lhncf-dySRCsltS----gfPVYv-yd~D~~~~G~~~d~~l-------k~~fq~t~~~n~~~ve~pd~ACiyi 241 (907)
T KOG2264|consen 175 QISPCQLHNCF-DYSRCSLTS----GFPVYV-YDSDIITSGQSEDEWL-------KQVFQETIPNNVYLVETPDKACIYI 241 (907)
T ss_pred ccCcccchhcc-ccccccccC----CceeEE-eccceeecccchHHHH-------HHHHHHhcccceeEeeCCCccEEEE
Confidence 44556655554 667999886 567653 333322 223332 3357788888899999999999987
Q ss_pred EeccccccccccccCCCCccccchHHHHHHHHHhcCccccccCCCCeEEEecccccccccCCCCCCCcccccccCccccc
Q 046652 186 VPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKN 265 (518)
Q Consensus 186 VP~y~sl~~~r~~~~~~~~~~r~~l~~~l~~~L~~~P~WnR~gGrDHf~v~~~~~wdf~r~~~~~~~wG~~~~~~p~~~N 265 (518)
+-+-. +. . +.+.. ..+ ++-|-+.|+|+ ++|+||++++.. |. ++-.+-+.....+
T Consensus 242 ~lvge---~q----~-P~~l~----p~e-leklyslp~w~-~dg~Nhvl~Nl~------r~----s~~~n~lyn~~t~-- 295 (907)
T KOG2264|consen 242 HLVGE---IQ----S-PVVLT----PAE-LEKLYSLPHWR-TDGFNHVLFNLG------RP----SDTQNLLYNFQTG-- 295 (907)
T ss_pred EEecc---cc----C-CCcCC----hHh-hhhhhcCcccc-CCCcceEEEEcc------Cc----cccccceeEeccC--
Confidence 76521 00 0 11101 122 34488999996 899999999862 11 1111211111111
Q ss_pred ceeeeeecc----CCC--CCeeeCCCCCCCCCCCchhhhhc--ccccccCCceEEEeccCCCCCCC--hhHHHHHHHHHh
Q 046652 266 MSMLSIESS----SWN--NDFAIPYPTCFHPSKESEIIGWQ--DRMRKRKRQYLFSFAGAPRPDLK--GSIRGKIIDQCL 335 (518)
Q Consensus 266 ~t~l~~e~~----~~~--~DvviPy~t~~hP~~~~~~~~w~--~~~~~~~R~~L~~FaG~~~~~~~--~~iR~~L~~~~~ 335 (518)
..+++.++ +++ +|++||+. .|+.... .|+ ..+.+.+|++|+.|+|++++..+ ...+.-..+...
T Consensus 296 -raivvQssf~~~q~RpgfDl~V~pv--~h~~~e~---~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~a 369 (907)
T KOG2264|consen 296 -RAIVVQSSFYTVQIRPGFDLPVDPV--NHIAVEK---NFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSA 369 (907)
T ss_pred -ceEEEeecceeeeeccCCCcccCcc--cccccCc---cceecCcccchhhheeEEEEeeecccccccchhhhhHHHhcc
Confidence 12223322 455 89888864 3443321 232 23457899999999998876443 223433333322
Q ss_pred hCC-C-----cEEEeecC----CC-------CCcCCCCcccccccccceEEEc-cCCCCCCC-----chHHHHHHhCcee
Q 046652 336 ASG-S-----LCRLIDCN----YG-------ATNCDNPVNVMKMFQNSVFCLQ-PPGDSYTR-----KSVFDTILAGCIP 392 (518)
Q Consensus 336 ~~~-~-----~~~~~~c~----~g-------~~~c~~~~~y~~~m~~S~FCL~-P~Gds~~s-----~Rl~DAi~aGCIP 392 (518)
+.+ + .+..+.|. +. ..-|...+...+++..|+|||. |+||+--+ .|+++|+..||||
T Consensus 370 dp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavP 449 (907)
T KOG2264|consen 370 DPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVP 449 (907)
T ss_pred CCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCee
Confidence 211 1 22334443 21 1235555678899999999997 88986322 7899999999999
Q ss_pred EEecCCCccccceeecCC----CCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHHhhcceeEEeCCCCCcCC
Q 046652 393 VFFHPGTAYAQYLWHLPK----NYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLET 468 (518)
Q Consensus 393 Viisd~~ay~qy~~~LPf----Dw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~ 468 (518)
||+++. ..||| ||++.++++|...+++ ++-+|+++...++.+||+++ +|.|.+..+.
T Consensus 450 viLg~~-------~~LPyqd~idWrraal~lPkaR~tE----~HFllrs~~dsDll~mRRqG-----Rl~wEtYls~--- 510 (907)
T KOG2264|consen 450 VILGNS-------QLLPYQDLIDWRRAALRLPKARLTE----AHFLLRSFEDSDLLEMRRQG-----RLFWETYLSD--- 510 (907)
T ss_pred EEeccc-------cccchHHHHHHHHHhhhCCccccch----HHHHHHhcchhhHHHHHhhh-----hhhHHHHhhH---
Confidence 999987 57998 9999999999999999 99999999999999999999 7888876553
Q ss_pred cccHHHHHHHHHHHHHHH
Q 046652 469 LEDAFDLAVKGILERIEQ 486 (518)
Q Consensus 469 ~~DAfd~il~~l~~R~~~ 486 (518)
..-.+++++..|+.|+..
T Consensus 511 ~~~~~~tvlA~lR~rlqI 528 (907)
T KOG2264|consen 511 RHLLARTVLAALRYRLQI 528 (907)
T ss_pred HHHHHHHHHHHHHHhhCC
Confidence 345789999999988864
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.22 E-value=1.2e-10 Score=123.39 Aligned_cols=236 Identities=16% Similarity=0.069 Sum_probs=155.4
Q ss_pred hccCccccCCCCCceEEEEeccccccccccccCCCCccccchHHHHHH-HHHhcCccccccCCCCeEEEecccccccccC
Q 046652 168 MKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLV-KWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQ 246 (518)
Q Consensus 168 Ll~s~~rT~DPeeAdlFyVP~y~sl~~~r~~~~~~~~~~r~~l~~~l~-~~L~~~P~WnR~gGrDHf~v~~~~~wdf~r~ 246 (518)
...|.+.|.|+++||+| +|- +|... .+ .+.-.+- .-|.+.-.|. .|.+|..+.+-+.=+
T Consensus 132 ~~~S~yyt~n~N~aclf-~Ps---~d~ln-----Qn-----~l~~kl~~~ala~l~~wd--rg~nH~~fnmLpGg~---- 191 (691)
T KOG1022|consen 132 WHLSFYYTFNYNGACLF-MPS---SDELN-----QN-----PLSWKLEKVALAKLLVWD--RGVNHEGFNMLPGGD---- 191 (691)
T ss_pred HHhccceecCCCceEEE-ecc---hhhhc-----cC-----cchHHHHHHHHhcccchh--cccceeeEeeccCCC----
Confidence 34588999999999998 884 33321 11 1222221 2356667899 799999988631111
Q ss_pred CCCCCCcccccccCcccccceeeeeeccCC--C--CCeeeCCCCCCCCCCCchhhhhcccccccCCceEEEeccCCCCCC
Q 046652 247 TDNESDWGSKFRFLPESKNMSMLSIESSSW--N--NDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDL 322 (518)
Q Consensus 247 ~~~~~~wG~~~~~~p~~~N~t~l~~e~~~~--~--~DvviPy~t~~hP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~ 322 (518)
++. +..+..+.. ++-...-.-..| + +||.+|..+ |... . +....+..|.+++.-.|- ++
T Consensus 192 ----p~y-ntaldv~~d-~a~~~gggf~tW~yr~g~dv~ipv~S---p~~v-~----~~~~~~g~r~~~l~~~q~---n~ 254 (691)
T KOG1022|consen 192 ----PTY-NTALDVGQD-EAWYSGGGFGTWKYRKGNDVYIPVRS---PGNV-G----RAFLYDGSRYRVLQDCQE---NY 254 (691)
T ss_pred ----CCc-cccccCCcc-eeEEecCCcCcccccCCCcccccccc---cccc-C----ccccCCccceeeeecccc---cc
Confidence 111 111111111 111111111345 3 899999853 3311 1 111235667666655543 67
Q ss_pred ChhHHHHHHHHHhhCCCcEEEe-ecCCC----CCcC--CCCcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEe
Q 046652 323 KGSIRGKIIDQCLASGSLCRLI-DCNYG----ATNC--DNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFF 395 (518)
Q Consensus 323 ~~~iR~~L~~~~~~~~~~~~~~-~c~~g----~~~c--~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPVii 395 (518)
+..+|..|.+...........+ .|.+- ...| +..-+|...+...+||+.-+|.+-+..-+.+-+.+||||||.
T Consensus 255 ~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~ 334 (691)
T KOG1022|consen 255 GPRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVIS 334 (691)
T ss_pred chHhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeee
Confidence 8889999998876654432222 24321 1234 234689999999999999988888888899999999999999
Q ss_pred cCCCccccceeecCC----CCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHH
Q 046652 396 HPGTAYAQYLWHLPK----NYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVV 451 (518)
Q Consensus 396 sd~~ay~qy~~~LPf----Dw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~ 451 (518)
.|. +.||| ||...||+++|..+.+ +.+.|.+|+...+.+||.+..
T Consensus 335 vd~-------y~lpf~~Vvdw~~aSv~~~e~~~~~----v~~~l~~i~~~~i~sl~~r~~ 383 (691)
T KOG1022|consen 335 VDI-------YLLPFLGVVDWIVASVWCMEYYAGK----VMDALLNIETAGICSLQLRRI 383 (691)
T ss_pred eeh-------hhhhhhhhhhceeeeEEeehhhHHH----HHHHhhcchhcchhhhhhhhh
Confidence 997 78998 9999999999999997 999999999999999987753
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=95.18 E-value=0.036 Score=58.46 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccC---CCCCCCchHHHHHHhCceeEEec
Q 046652 326 IRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPP---GDSYTRKSVFDTILAGCIPVFFH 396 (518)
Q Consensus 326 iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~---Gds~~s~Rl~DAi~aGCIPViis 396 (518)
-|..+++.+.+.-.+-.+-.|..+ .+.......+.+++-+|.|+.. .....+--+++|+.+|||||+++
T Consensus 190 ~R~~~~~~L~~~~~vd~yG~c~~~--~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G 261 (349)
T PF00852_consen 190 GREEYVRELSKYIPVDSYGKCGNN--NPCPRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWG 261 (349)
T ss_dssp HHHHHHHHHHTTS-EEE-SSTT----SSS--S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES
T ss_pred cHHHHHHHHHhhcCeEccCCCCCC--CCcccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEEC
Confidence 499999999887432222224111 1122345788999999999954 45667788999999999999999
No 6
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.05 E-value=0.079 Score=53.34 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=60.3
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|..|.+++.|.........++|||.+|| |||.++...... + ..-....+.++..+..+-.-.|.+++.
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~~~~----~-i~~~~~g~~~~~~~~~~l~~~i~~l~~ 331 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGGPAD----I-VTDGENGLLVEPGDAEAFAAALAALLA 331 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCCchh----h-hcCCcceEEcCCCCHHHHHHHHHHHHc
Confidence 4567889999999999877666678999999999 888887632111 1 111244555666555430011333333
Q ss_pred cCCHHHHHHHHHHHHhhcceeEE
Q 046652 437 GISEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v~~~f~Y 459 (518)
.++.+.+|.++..+....+-|
T Consensus 332 --~~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 332 --DPELRRRMAARARAEAERRSW 352 (364)
T ss_pred --CHHHHHHHHHHHHHHHhhcCH
Confidence 467888888887665544433
No 7
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.31 E-value=0.22 Score=50.03 Aligned_cols=93 Identities=15% Similarity=0.210 Sum_probs=60.0
Q ss_pred cccccccccceEEEccCCCCCC-----CchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYT-----RKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNV 431 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~-----s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l 431 (518)
.++.+.|..+.+++.|...+.. ...+.||+.+|| |||.++...... . ..-....+.++..+..+ +
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~~----~-~~~~~~g~~~~~~~~~~----l 355 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESAE----L-VEEAGAGLVVPPGDPEA----L 355 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCchh----h-hccCCcceEeCCCCHHH----H
Confidence 4677889999999998765532 456899999996 888887632111 0 11114556666666654 5
Q ss_pred HHHHccC--CHHHHHHHHHHHHhhcc-eeEE
Q 046652 432 NETLVGI--SEDRILALREQVVRLIP-SVIY 459 (518)
Q Consensus 432 ~~iL~~I--s~e~i~~Mr~~l~~v~~-~f~Y 459 (518)
.+.|..+ .++++.+|.++..+... +|-|
T Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 386 (394)
T cd03794 356 AAAILELLDDPEERAEMGENGRRYVEEKFSR 386 (394)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence 5555444 57788888887765443 5444
No 8
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=93.74 E-value=0.29 Score=49.34 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=60.6
Q ss_pred cccccccccceEEEccCCCC--CCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDS--YTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNET 434 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds--~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~i 434 (518)
.+..+.|+.+.+++.|.... ..+..+.|||.+|+ |||.++... .. ++ .+ ..-.+.++..++.+ +.+.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~-~~---~i-~~-~~~g~~~~~~d~~~----~~~~ 327 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH-AE---EV-LD-GGTGLLVPPGDPAA----LAEA 327 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC-hh---ee-ee-CCCcEEEcCCCHHH----HHHH
Confidence 35678999999999998766 66678999999999 999988632 11 00 11 23345566555554 4444
Q ss_pred HccC--CHHHHHHHHHHHHhhcceeEE
Q 046652 435 LVGI--SEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 435 L~~I--s~e~i~~Mr~~l~~v~~~f~Y 459 (518)
|..+ .++...+|+++..+....|-|
T Consensus 328 l~~l~~~~~~~~~~~~~~~~~~~~~s~ 354 (366)
T cd03822 328 IRRLLADPELAQALRARAREYARAMSW 354 (366)
T ss_pred HHHHHcChHHHHHHHHHHHHHHhhCCH
Confidence 4332 246788898888776655443
No 9
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=92.90 E-value=0.87 Score=45.10 Aligned_cols=87 Identities=8% Similarity=0.124 Sum_probs=54.9
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+.|.+++.|.........++|||.+|| |||.++......+ ..-....+.++.++..+ +.+.+.
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~~~~-----i~~~~~g~~~~~~~~~~----~~~~i~ 324 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGCREA-----VIDGVNGFLVPPGDAEA----LADAIE 324 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCchhh-----hhcCcceEEECCCCHHH----HHHHHH
Confidence 4567789999999999765555678999999995 7888875321110 11134456666666554 334433
Q ss_pred cC--CHHHHHHHHHHHHhh
Q 046652 437 GI--SEDRILALREQVVRL 453 (518)
Q Consensus 437 ~I--s~e~i~~Mr~~l~~v 453 (518)
.+ .++.+.+|.++.++.
T Consensus 325 ~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 325 RLIEDPELRARMGQAARKR 343 (359)
T ss_pred HHHhCHHHHHHHHHHHHHH
Confidence 32 356677776665543
No 10
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=92.59 E-value=0.7 Score=50.17 Aligned_cols=96 Identities=10% Similarity=0.118 Sum_probs=64.8
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCC--CCeeEEEEeCCccccccccHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKN--YSSYSLYIPVRDVKDWRVNVNET 434 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfD--w~~fSV~Ipe~dv~~~~~~l~~i 434 (518)
.+..+.|+.+..++.|........-++|||.+| +|||.++..... ++--+ ..+..+.++..|..+ +.+.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg~~----eiv~~~~~~~~G~lv~~~d~~~----la~~ 393 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGGIP----DIIPPDQEGKTGFLYTPGDVDD----CVEK 393 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCCcH----hhhhcCCCCCceEEeCCCCHHH----HHHH
Confidence 467788999999999987655567799999999 899998753111 11112 256677777777665 4444
Q ss_pred HccC--CHHHHHHHHHHHHhhcceeEEeC
Q 046652 435 LVGI--SEDRILALREQVVRLIPSVIYAD 461 (518)
Q Consensus 435 L~~I--s~e~i~~Mr~~l~~v~~~f~Y~~ 461 (518)
|..+ .++...+|.++.++....|-|..
T Consensus 394 i~~ll~~~~~~~~~~~~a~~~~~~fsw~~ 422 (465)
T PLN02871 394 LETLLADPELRERMGAAAREEVEKWDWRA 422 (465)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4333 46778889888877665555543
No 11
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=91.69 E-value=0.91 Score=45.20 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=55.7
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+.+.+++.|......+..+.|||.+|| |||.++..... ++--+ ..+.++.++..+ +.+.+.
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~~----e~~~~---~g~~~~~~~~~~----l~~~i~ 327 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDNA----ELVGD---TGFLVPPGDPEA----LAEAIE 327 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCChH----HHhhc---CCEEeCCCCHHH----HHHHHH
Confidence 4567889999999999876555678999999996 88887753211 11012 455666655543 333333
Q ss_pred cC--CHHHHHHHHHHHHh-hcceeEE
Q 046652 437 GI--SEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 437 ~I--s~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
.+ .++++.+|.++..+ +..+|-|
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (365)
T cd03807 328 ALLADPALRQALGEAARERIEENFSI 353 (365)
T ss_pred HHHhChHHHHHHHHHHHHHHHHhCCH
Confidence 32 23666677666554 3344444
No 12
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=91.62 E-value=0.51 Score=46.52 Aligned_cols=94 Identities=10% Similarity=0.066 Sum_probs=59.5
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+++.+++.|.........++|||.+||.+ |.++..... -++ .+-....+.++..++.+ +.+.|.
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~~~---~~~-~~~~~~g~~~~~~~~~~----~~~~i~ 314 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPTGP---SEI-IEDGVNGLLVPNGDVEA----LAEALL 314 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCCch---Hhh-hccCcceEEeCCCCHHH----HHHHHH
Confidence 567789999999999976544457799999999865 555531100 111 12224566677666654 444444
Q ss_pred cC--CHHHHHHHHHHHHhhcceeEE
Q 046652 437 GI--SEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 437 ~I--s~e~i~~Mr~~l~~v~~~f~Y 459 (518)
.+ .++...+|.++..+..+.|-|
T Consensus 315 ~ll~~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 315 RLMEDEELRKRMGANARESAERFSI 339 (348)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCH
Confidence 43 477888888887666555443
No 13
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=91.55 E-value=1.4 Score=45.22 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=57.4
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|..+..++.|.-.......+.|||.+| +|||.++.... -++--+ ..-...++..+..+ +.+.+.
T Consensus 262 ~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~~----~e~i~~-~~~G~~~~~~~~~~----l~~~i~ 331 (371)
T cd04962 262 DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGGI----PEVVKH-GETGFLVDVGDVEA----MAEYAL 331 (371)
T ss_pred ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCCc----hhhhcC-CCceEEcCCCCHHH----HHHHHH
Confidence 357788999999999874444456799999999 78888875311 011112 22334556556554 333333
Q ss_pred cC--CHHHHHHHHHHHHhh-cceeEE
Q 046652 437 GI--SEDRILALREQVVRL-IPSVIY 459 (518)
Q Consensus 437 ~I--s~e~i~~Mr~~l~~v-~~~f~Y 459 (518)
.+ .++.+.+|+++..+. ..+|-|
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 332 SLLEDDELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 22 467888888887764 444433
No 14
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=91.40 E-value=0.19 Score=49.68 Aligned_cols=94 Identities=13% Similarity=0.172 Sum_probs=61.0
Q ss_pred CcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHH
Q 046652 356 PVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETL 435 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL 435 (518)
..++.+.|..|.+.+.|.-.......++||+.+|| |||.++...... + +......+.++..+..+ +.+.|
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~~~~~----~-~~~~~~g~~~~~~~~~~----l~~~i 335 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPE----V-VEDGETGLLVPPGDPEA----LAEAI 335 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCCChhH----H-hcCCcceEEeCCCCHHH----HHHHH
Confidence 36778899999999999765555678999999997 677776422111 0 12245667777766554 55555
Q ss_pred ccC--CHHHHHHHHHHHH-hhcceeEE
Q 046652 436 VGI--SEDRILALREQVV-RLIPSVIY 459 (518)
Q Consensus 436 ~~I--s~e~i~~Mr~~l~-~v~~~f~Y 459 (518)
..+ .++...+|.++.. .+...+-|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 336 LRLLDDPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHhcCH
Confidence 543 3566777877765 34444433
No 15
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=91.16 E-value=0.078 Score=48.64 Aligned_cols=85 Identities=11% Similarity=0.218 Sum_probs=51.4
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.++.+.++.|.+.++|......+..+.|||.+|| |||.++..... +.--+. .-.+.++..++.+ +.+.+.
T Consensus 84 ~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~~~----e~~~~~-~~g~~~~~~~~~~----l~~~i~ 153 (172)
T PF00534_consen 84 DELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGGNN----EIINDG-VNGFLFDPNDIEE----LADAIE 153 (172)
T ss_dssp HHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTHHH----HHSGTT-TSEEEESTTSHHH----HHHHHH
T ss_pred cccccccccceecccccccccccccccccccccc-ceeeccccCCc----eeeccc-cceEEeCCCCHHH----HHHHHH
Confidence 4678899999999999887777789999999999 66666642111 100011 1345566666655 445554
Q ss_pred cCC--HHHHHHHHHHHH
Q 046652 437 GIS--EDRILALREQVV 451 (518)
Q Consensus 437 ~Is--~e~i~~Mr~~l~ 451 (518)
.+- ++....|.++.+
T Consensus 154 ~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhc
Confidence 443 355666666554
No 16
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=90.75 E-value=0.5 Score=47.58 Aligned_cols=92 Identities=12% Similarity=0.145 Sum_probs=59.3
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.++.+.|..+.+++.|.-....+..++|||.+|| |||.++..+.. ++ -.+..+.++..+..+ +.+.|.
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~~~----e~---~~~~~~~~~~~~~~~----~~~~i~ 331 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISSLP----EV---AGDAALYFDPLDPEA----LAAAIE 331 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCCcc----ce---ecCceeeeCCCCHHH----HHHHHH
Confidence 4567889999999998644334566999999996 77877753221 11 123455666666554 555554
Q ss_pred c-C-CHHHHHHHHHHHHhhcceeEEe
Q 046652 437 G-I-SEDRILALREQVVRLIPSVIYA 460 (518)
Q Consensus 437 ~-I-s~e~i~~Mr~~l~~v~~~f~Y~ 460 (518)
. + .++...+|.++.+++...|-|.
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 332 RLLEDPALREELRERGLARAKRFSWE 357 (365)
T ss_pred HHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 4 2 4677788888776666665553
No 17
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=90.70 E-value=0.79 Score=47.34 Aligned_cols=92 Identities=11% Similarity=0.127 Sum_probs=57.5
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHcc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVG 437 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~ 437 (518)
+..+.+..|..++.|.-.......++|||.+| +|||.++..... ++ ..-....+.++..+..+ +.+.+..
T Consensus 295 ~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~~~~----e~-i~~~~~g~~~~~~~~~~----l~~~i~~ 364 (398)
T cd03800 295 DLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVGGPR----DI-VVDGVTGLLVDPRDPEA----LAAALRR 364 (398)
T ss_pred HHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCCCHH----HH-ccCCCCeEEeCCCCHHH----HHHHHHH
Confidence 45667889999999876555556799999999 599998753111 11 11223456666665544 3333332
Q ss_pred C--CHHHHHHHHHHHHhhc-ceeEE
Q 046652 438 I--SEDRILALREQVVRLI-PSVIY 459 (518)
Q Consensus 438 I--s~e~i~~Mr~~l~~v~-~~f~Y 459 (518)
+ .++++.+|.++.++.. .+|-|
T Consensus 365 l~~~~~~~~~~~~~a~~~~~~~~s~ 389 (398)
T cd03800 365 LLTDPALRRRLSRAGLRRARARYTW 389 (398)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 2 3677888888776543 55544
No 18
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=90.61 E-value=0.92 Score=47.83 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=55.5
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.++.+.|+.|..++.|.-....+..++|||.+|| |||.++..... ++ ..-..-.+.++..|...-.-.|.++|.
T Consensus 292 ~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~g~~----e~-i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 292 DQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTAPVR----EV-ITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred HHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCCCch----hh-cccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 4667888888888887544333457999999999 88888752111 10 122334556666665441112344443
Q ss_pred cCCHHHHHHHHHHHHhhc-ceeEE
Q 046652 437 GISEDRILALREQVVRLI-PSVIY 459 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v~-~~f~Y 459 (518)
.++...+|.++.++.. .+|-|
T Consensus 366 --~~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 366 --DPARRARLRRAARRTALRYDLL 387 (396)
T ss_pred --CHHHHHHHHHHHHHHHHHhccH
Confidence 3567778877776533 33444
No 19
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=90.16 E-value=1.3 Score=44.18 Aligned_cols=88 Identities=16% Similarity=0.186 Sum_probs=54.8
Q ss_pred cccccccccceEEEccCC-CCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPG-DSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETL 435 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~G-ds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL 435 (518)
.+..+.|+.+..++.|.- .......+.|||.+| +|||.++..... ++ .+.....+.++..|+.+-.-.|.+++
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~~~~----e~-i~~~~~g~~~~~~d~~~l~~~i~~l~ 327 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIGGMA----EL-VRDGVNGLLFPPGDAEDLAAALERLI 327 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCCCHH----HH-hcCCCcEEEECCCCHHHHHHHHHHHH
Confidence 466788999999999963 233456799999999 778887753111 11 12333566777766554111233333
Q ss_pred ccCCHHHHHHHHHHHHh
Q 046652 436 VGISEDRILALREQVVR 452 (518)
Q Consensus 436 ~~Is~e~i~~Mr~~l~~ 452 (518)
. .++..++|+++.++
T Consensus 328 ~--~~~~~~~~~~~~~~ 342 (359)
T cd03823 328 D--DPDLLERLRAGIEP 342 (359)
T ss_pred h--ChHHHHHHHHhHHH
Confidence 3 46778888777644
No 20
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=89.71 E-value=1.7 Score=46.81 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=73.2
Q ss_pred ceEEEeccCCCCCCChhHHHHHHHHHhhC--CCcEEEeecCCCCCcCCCCcccccccccceEEEccCCCCCCCchHHHHH
Q 046652 309 QYLFSFAGAPRPDLKGSIRGKIIDQCLAS--GSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTI 386 (518)
Q Consensus 309 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi 386 (518)
+.-+.+.|..+.......+..|.++.++. .+.+.++. . ....+..+.|+.|..++.|.=+..-...+.|||
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g------~-v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAM 345 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV------N-APFEELLEELSTASIGLHTMWNEHFGIGVVEYM 345 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec------C-CCHHHHHHHHHhCeEEEECCccCCcccHHHHHH
Confidence 46677778643333333445554444332 23344431 1 123567889999999998865444457799999
Q ss_pred HhCceeEEecCCCccccceeecCCCCCeeEEEE-eCCccccccccHHHHHccCCHHHHHHHHHHHHhhcceeEEe
Q 046652 387 LAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYI-PVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYA 460 (518)
Q Consensus 387 ~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~I-pe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~ 460 (518)
.+||.||.-..+-.... ..-|..-..-.+.+ +.+++.+ .|.++|+. ++++...|+++-+++..+|-+.
T Consensus 346 a~G~pvIa~~~ggp~~~--iv~~~~~g~~G~l~~d~~~la~---ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 346 AAGLIPLAHASGGPLLD--IVVPWDGGPTGFLASTAEEYAE---AIEKILSL-SEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred HcCCcEEEEcCCCCchh--eeeccCCCCceEEeCCHHHHHH---HHHHHHhC-CHHHHHHHHHHHHHHHHhhCHH
Confidence 99997765433211000 11121111222222 2222322 24444443 6666666777777777766543
No 21
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=89.62 E-value=0.25 Score=51.34 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=59.3
Q ss_pred ccccccccceEEEccCCCC-----------CCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcccc
Q 046652 358 NVMKMFQNSVFCLQPPGDS-----------YTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKD 426 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds-----------~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~ 426 (518)
+..+.|+. .|+|++.+++ .....++++|.+| +|||.++..+.... ..-....+.++ ++.+
T Consensus 219 el~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~~~-----V~~~~~G~~v~--~~~e 289 (333)
T PRK09814 219 ELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIADF-----IVENGLGFVVD--SLEE 289 (333)
T ss_pred HHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHHHH-----HHhCCceEEeC--CHHH
Confidence 44455555 8999887761 1123488888888 59999887432211 12234455554 4444
Q ss_pred ccccHHHHHccCCHHHHHHHHHHHHhhcceeE
Q 046652 427 WRVNVNETLVGISEDRILALREQVVRLIPSVI 458 (518)
Q Consensus 427 ~~~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~ 458 (518)
+.+.|..++++++.+|+++.+++.+.+.
T Consensus 290 ----l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 290 ----LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred ----HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999988877664
No 22
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=89.62 E-value=2.6 Score=42.76 Aligned_cols=94 Identities=9% Similarity=0.078 Sum_probs=58.9
Q ss_pred CcccccccccceEEEccC-CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHH
Q 046652 356 PVNVMKMFQNSVFCLQPP-GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNET 434 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~-Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~i 434 (518)
..++.+.|+.|..++.|. -.......++|||.+|| |||.++......+ .......+.++.++... +.+.
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~~~~e~-----i~~~~~g~~~~~~~~~~----l~~~ 323 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHGGARET-----VRPGETGLLVPPGDAEA----LAQA 323 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCCCcHHH-----HhCCCceEEeCCCCHHH----HHHH
Confidence 346788899999999886 22223357999999999 7788775321110 12233455666667665 5555
Q ss_pred Hc---cCCHHHHHHHHHHHHh-hcceeEE
Q 046652 435 LV---GISEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 435 L~---~Is~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
|. ...+++..+|.++.++ +..+|.|
T Consensus 324 i~~~~~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 324 LDQILSLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhhhh
Confidence 42 2357888888888765 3344443
No 23
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=89.54 E-value=1.4 Score=45.12 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=56.1
Q ss_pred cccccccccceEEEccCCC------CCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcccccccc
Q 046652 357 VNVMKMFQNSVFCLQPPGD------SYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gd------s~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~ 430 (518)
.+..+.|..|...+.|.-. ......++|||.+|| |||.++......+ ..-....+.++..+..+
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~~e~-----i~~~~~g~~~~~~d~~~---- 325 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGIPEA-----VEDGETGLLVPEGDVAA---- 325 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCchhh-----eecCCeeEEECCCCHHH----
Confidence 4566778888888877421 112457999999996 9999886321110 12234566777766654
Q ss_pred HHHHHccC--CHHHHHHHHHHHHh-hcceeEE
Q 046652 431 VNETLVGI--SEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 431 l~~iL~~I--s~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
+.+.|..+ .++...+|.++.++ +..+|-|
T Consensus 326 l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 326 LAAALGRLLADPDLRARMGAAGRRRVEERFDL 357 (367)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCH
Confidence 44444332 35667778777654 3345544
No 24
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=89.40 E-value=1.4 Score=44.57 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=52.6
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+.+.+.+.|.........++|||.+|| |||.+|..... ++--+ ....++..+..+-.-.|.++|+
T Consensus 254 ~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~----e~i~~---~g~~~~~~~~~~~~~~i~~ll~ 325 (360)
T cd04951 254 DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGVR----EVVGD---SGLIVPISDPEALANKIDEILK 325 (360)
T ss_pred ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCChh----hEecC---CceEeCCCCHHHHHHHHHHHHh
Confidence 3556788999998888765545577999999999 88888753211 11112 2344455555441111333332
Q ss_pred cCCHHHHHHHHHHHHhhcceeEE
Q 046652 437 GISEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v~~~f~Y 459 (518)
.+++....|.+.-..+...|-|
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 326 -MSGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred -CCHHHHHHHHHHHHHHHHhcCH
Confidence 3455555565553334444433
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=89.22 E-value=1.4 Score=46.37 Aligned_cols=97 Identities=11% Similarity=0.136 Sum_probs=58.7
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+.+..++.|.=.......+.|||.+|| |||.++...... . ..-....+.++..|..+-.-.|.++|.
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~~e---~--i~~~~~g~~~~~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGLPV---A--VADGETGLLVDGHDPADWADALARLLD 367 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCcHh---h--hccCCceEECCCCCHHHHHHHHHHHHh
Confidence 4566789999988888543333467999999996 888887521110 0 112234556666666541112334443
Q ss_pred cCCHHHHHHHHHHHHhhcceeEEeC
Q 046652 437 GISEDRILALREQVVRLIPSVIYAD 461 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v~~~f~Y~~ 461 (518)
.++...+|.++..+...+|-|..
T Consensus 368 --~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 368 --DPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred --CHHHHHHHHHHHHHHHHhCCHHH
Confidence 36777888888877666555443
No 26
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=89.05 E-value=2.2 Score=44.17 Aligned_cols=93 Identities=12% Similarity=0.066 Sum_probs=56.6
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+.|.+++.|.-.......+.|||.+|+ |||.+|...... + ..-......++..|..+ +.+.|.
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g~~e----~-i~~~~~g~~~~~~d~~~----la~~i~ 333 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGGNPE----L-VQHGVTGALVPPGDAVA----LARALQ 333 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCCcHH----H-hcCCCceEEeCCCCHHH----HHHHHH
Confidence 4567888889888888644444567999999996 999988521111 0 12234566677666654 444443
Q ss_pred cC--CHHHHHHHHHHHHhh-cceeEE
Q 046652 437 GI--SEDRILALREQVVRL-IPSVIY 459 (518)
Q Consensus 437 ~I--s~e~i~~Mr~~l~~v-~~~f~Y 459 (518)
.+ .++...+|.++.++. ..+|-|
T Consensus 334 ~l~~~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 334 PYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 33 355666676665443 344444
No 27
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=88.89 E-value=1.3 Score=44.25 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=53.6
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHcc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVG 437 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~ 437 (518)
+..+.|..+.+++.|.-.......+.|||.+|| |||.++...... +--+ ...+.++.++ .+-.-.|.+++.
T Consensus 274 ~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~~----~~~~--~~~~~~~~~~-~~~~~~i~~l~~- 344 (375)
T cd03821 274 DKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPWQE----LIEY--GCGWVVDDDV-DALAAALRRALE- 344 (375)
T ss_pred HHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCHHH----Hhhc--CceEEeCCCh-HHHHHHHHHHHh-
Confidence 566778999999998765545677999999996 888887532211 1012 3344444332 220001333333
Q ss_pred CCHHHHHHHHHHHHhh-cceeEE
Q 046652 438 ISEDRILALREQVVRL-IPSVIY 459 (518)
Q Consensus 438 Is~e~i~~Mr~~l~~v-~~~f~Y 459 (518)
.++..++|.++.++. ..+|-|
T Consensus 345 -~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 345 -LPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred -CHHHHHHHHHHHHHHHHHhcCH
Confidence 236777787777664 555444
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=87.18 E-value=3.2 Score=44.43 Aligned_cols=92 Identities=13% Similarity=0.227 Sum_probs=59.0
Q ss_pred cccccccccceEEEccCC-------CCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccc
Q 046652 357 VNVMKMFQNSVFCLQPPG-------DSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRV 429 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~G-------ds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~ 429 (518)
.+..+.|+.+..++.|.= ++. ...+.|||.+|+ |||.++...-. ++ ..-..-.+.+++.|..+
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg~-p~~llEAma~G~-PVI~t~~~g~~----E~-v~~~~~G~lv~~~d~~~--- 359 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEGI-PVALMEAMAVGI-PVVSTLHSGIP----EL-VEADKSGWLVPENDAQA--- 359 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccCc-cHHHHHHHhCCC-CEEEeCCCCch----hh-hcCCCceEEeCCCCHHH---
Confidence 456788999999998852 232 356999999995 99998753111 11 12234566777777765
Q ss_pred cHHHHHccC---CHHHHHHHHHHHHh-hcceeEE
Q 046652 430 NVNETLVGI---SEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 430 ~l~~iL~~I---s~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
+.+.|..+ .+++..+|.++.++ +..+|-|
T Consensus 360 -la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 360 -LAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred -HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 55555443 56778888888754 4455543
No 29
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=87.15 E-value=2.3 Score=42.19 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=42.4
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcccc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKD 426 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~ 426 (518)
.+..+.+.+|.+++.|.........++||+.+|| |||.++..+... + .......+.++..+..+
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~~~----~-~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPE----I-ITDGENGLLVPPGDPEA 333 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCChHH----H-hcCCcceeEECCCCHHH
Confidence 4567889999999999866556678999999998 677776532211 1 11222245666666554
No 30
>PRK00654 glgA glycogen synthase; Provisional
Probab=84.38 E-value=4.3 Score=44.20 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=50.0
Q ss_pred ccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCC---CeeEEEEeCCccccccccHHHHHc
Q 046652 360 MKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNY---SSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 360 ~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw---~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
...++.+.+++.|.=..+......|||.+||+||+-.-+. -.. ...+.++ +.-.+.++..|... +.+.|.
T Consensus 351 ~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG-~~e--~v~~~~~~~~~~~G~lv~~~d~~~----la~~i~ 423 (466)
T PRK00654 351 HRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGG-LAD--TVIDYNPEDGEATGFVFDDFNAED----LLRALR 423 (466)
T ss_pred HHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCC-ccc--eeecCCCCCCCCceEEeCCCCHHH----HHHHHH
Confidence 4678999999999766666677999999999887754331 000 1111111 13456667666554 444443
Q ss_pred cC-----CHHHHHHHHHHH
Q 046652 437 GI-----SEDRILALREQV 450 (518)
Q Consensus 437 ~I-----s~e~i~~Mr~~l 450 (518)
.+ .++.+.+|.++.
T Consensus 424 ~~l~~~~~~~~~~~~~~~~ 442 (466)
T PRK00654 424 RALELYRQPPLWRALQRQA 442 (466)
T ss_pred HHHHHhcCHHHHHHHHHHH
Confidence 32 245566776655
No 31
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=83.29 E-value=4.6 Score=42.64 Aligned_cols=95 Identities=7% Similarity=0.070 Sum_probs=52.6
Q ss_pred cccccccccceEEEccCCC-CCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGD-SYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETL 435 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gd-s~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL 435 (518)
.+..+.|+.|..++.|... .....-++|||.+| +|||.++...-. ++--|...=-+.++..+..+ +.+.|
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~----Eiv~~~~~G~~l~~~~d~~~----la~~I 338 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT----EFVLEGITGYHLAEPMTSDS----IISDI 338 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH----hhcccCCceEEEeCCCCHHH----HHHHH
Confidence 4567788999999998753 33345799999999 789998753111 11112221112344444443 33333
Q ss_pred cc-CCHHHHHHHHHHHHh-hcceeEEe
Q 046652 436 VG-ISEDRILALREQVVR-LIPSVIYA 460 (518)
Q Consensus 436 ~~-Is~e~i~~Mr~~l~~-v~~~f~Y~ 460 (518)
.. +.+.+..+|.++.++ +..+|-|.
T Consensus 339 ~~ll~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 339 NRTLADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhCCHH
Confidence 22 233345667777653 45555553
No 32
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=83.22 E-value=14 Score=36.86 Aligned_cols=90 Identities=9% Similarity=0.103 Sum_probs=53.2
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCc--cccccccHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRD--VKDWRVNVNET 434 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~d--v~~~~~~l~~i 434 (518)
.++.+.|..|.+.+.|.........++|||.+|+ |||.++..+... -..-....+.++..+ +.+ .|.++
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~~~~-----~i~~~~~g~~~~~~~~~~~~---~i~~l 340 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPGLPD-----LVADGENGFLFPPGDEALAE---ALLRL 340 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCChhh-----heecCceeEEeCCCCHHHHH---HHHHH
Confidence 4567889999999999765555678999999986 556665432111 112223444555444 222 13333
Q ss_pred HccCCHHHHHHHHHHHHhhccee
Q 046652 435 LVGISEDRILALREQVVRLIPSV 457 (518)
Q Consensus 435 L~~Is~e~i~~Mr~~l~~v~~~f 457 (518)
+. .++..++|+++.++...++
T Consensus 341 ~~--~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 341 LQ--DPELRRRLSKNAEESAEKF 361 (374)
T ss_pred Hh--ChHHHHHHHHHHHHHHHHH
Confidence 33 2455578887776655443
No 33
>PRK14098 glycogen synthase; Provisional
Probab=82.86 E-value=4.1 Score=44.96 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=33.0
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
...+.++.|.+++.|.=..+......+||.+||+||+...+
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~G 414 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGG 414 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCC
Confidence 34577899999999976666666789999999999987644
No 34
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=82.64 E-value=5.1 Score=43.55 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=50.1
Q ss_pred cccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCC-----CeeEEEEeCCccccccccHHH
Q 046652 359 VMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNY-----SSYSLYIPVRDVKDWRVNVNE 433 (518)
Q Consensus 359 y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw-----~~fSV~Ipe~dv~~~~~~l~~ 433 (518)
..+.++.+.+++.|.-..+......|||.+||.||+-..+. .. +.-.|. ....+.++..+..+-.-.|.+
T Consensus 359 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg-~~----e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~ 433 (473)
T TIGR02095 359 AHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG-LA----DTVVDGDPEAESGTGFLFEEYDPGALLAALSR 433 (473)
T ss_pred HHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC-cc----ceEecCCCCCCCCceEEeCCCCHHHHHHHHHH
Confidence 45678999999999876666677999999999766543321 10 100121 144566666665540001233
Q ss_pred HHccC--CHHHHHHHHHHH
Q 046652 434 TLVGI--SEDRILALREQV 450 (518)
Q Consensus 434 iL~~I--s~e~i~~Mr~~l 450 (518)
+|.-. .++.+.+|.++.
T Consensus 434 ~l~~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 434 ALRLYRQDPSLWEALQKNA 452 (473)
T ss_pred HHHHHhcCHHHHHHHHHHH
Confidence 33311 356677777665
No 35
>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2.
Probab=82.49 E-value=1.1 Score=36.38 Aligned_cols=28 Identities=39% Similarity=0.338 Sum_probs=24.8
Q ss_pred cccccccchhhHHHHHHHHHHHHHhhcc
Q 046652 3 GINCWSQQLGFAILISFVLCFVLLCFDY 30 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 30 (518)
+.++|.|.-|+.|.+.|+.|.++|+|.|
T Consensus 41 ~~~~~~~~~~~ii~ii~v~ii~~l~flY 68 (72)
T PF12575_consen 41 KNNKNFNWIILIISIIFVLIIVLLTFLY 68 (72)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888889999999999999999987
No 36
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=82.31 E-value=1.8 Score=44.37 Aligned_cols=40 Identities=13% Similarity=0.262 Sum_probs=31.3
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.+..+.|+.+..++.|.-.+. ...+.|||.+|| |||.++.
T Consensus 253 ~~~~~~~~~ad~~v~ps~e~~-g~~~~Eama~G~-Pvi~~~~ 292 (351)
T cd03804 253 EELRDLYARARAFLFPAEEDF-GIVPVEAMASGT-PVIAYGK 292 (351)
T ss_pred HHHHHHHHhCCEEEECCcCCC-CchHHHHHHcCC-CEEEeCC
Confidence 346788999999998865443 356899999998 9988875
No 37
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=81.98 E-value=31 Score=36.92 Aligned_cols=154 Identities=16% Similarity=0.272 Sum_probs=82.8
Q ss_pred CCeeeCCCCCCCCC-CCchhhhhcccccccCCceEEEeccCCCCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCC
Q 046652 278 NDFAIPYPTCFHPS-KESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNP 356 (518)
Q Consensus 278 ~DvviPy~t~~hP~-~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~ 356 (518)
-|+.+||-...++. ... ...++ ..-..+++.++.+.-.. ....-|.++++.+...-..-..-+|......+...
T Consensus 167 Sd~~~pygy~~~~~~~~~-~~p~~-~~~~~k~~~~aw~vSnc---~~~~~R~~~~~~L~k~l~iD~YG~c~~~~~~~~~~ 241 (372)
T KOG2619|consen 167 SDLFVPYGYLEKPEANPV-LVPVN-SILSAKTKLAAWLVSNC---IPRSARLDYYKELMKHLEIDSYGECLRKNANRDPS 241 (372)
T ss_pred CCCCCccceEeecccCce-ecccc-cccccccceeeeecccc---CcchHHHHHHHHHHhhCceeeccccccccccCCCC
Confidence 57888884211222 111 11222 12244555555555543 24566777777776542211122343211122334
Q ss_pred cccccccccceEEEccC---CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHH
Q 046652 357 VNVMKMFQNSVFCLQPP---GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNE 433 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~---Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~ 433 (518)
....+.+..=||=|.-. -..+-+.-|+-|+.+|.|||+++.. -|+. | +| .+- +|..+|..... .+..
T Consensus 242 ~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~-n~e~--f-vP---~~S--fI~vdDF~s~~-ela~ 311 (372)
T KOG2619|consen 242 DCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPP-NYEN--F-VP---PDS--FIHVDDFQSPQ-ELAA 311 (372)
T ss_pred CcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCc-cccc--c-CC---Ccc--eEehhhcCCHH-HHHH
Confidence 56688888999999853 3345567899999999999999984 2221 2 34 222 23444543211 1667
Q ss_pred HHccCCHHHHHHH
Q 046652 434 TLVGISEDRILAL 446 (518)
Q Consensus 434 iL~~Is~e~i~~M 446 (518)
.|+.+..++.+-|
T Consensus 312 ylk~L~~n~~~Y~ 324 (372)
T KOG2619|consen 312 YLKKLDKNPAAYL 324 (372)
T ss_pred HHHHhhcCHHHHH
Confidence 7777755444443
No 38
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=80.17 E-value=1.7 Score=44.98 Aligned_cols=93 Identities=6% Similarity=0.085 Sum_probs=55.5
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcc------cccccc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDV------KDWRVN 430 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv------~~~~~~ 430 (518)
.+..+.|..|..++.|.-.......+.|||.+|| |||.++..... ++ ..-....+.++..+. ..
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~~----e~-i~~~~~G~~~~~~~~~~~~~~~~---- 341 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGIP----EV-VVDGETGFLVPPDNSDADGFQAE---- 341 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCHH----HH-hhCCCceEEcCCCCCcccchHHH----
Confidence 4567778999999998654444466899999999 88888752111 10 111233455555544 22
Q ss_pred HHHHHccC--CHHHHHHHHHHHHh-hcceeEE
Q 046652 431 VNETLVGI--SEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 431 l~~iL~~I--s~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
+.+.|..+ .+++.++|.++.++ +..+|-|
T Consensus 342 l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 342 LAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 33444332 46777888877665 3345544
No 39
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=79.91 E-value=3.9 Score=33.75 Aligned_cols=71 Identities=4% Similarity=0.057 Sum_probs=41.1
Q ss_pred CCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEE-eCCccccccccHHHHHccCCHHHHHHHHHHHHh-hcc
Q 046652 378 TRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYI-PVRDVKDWRVNVNETLVGISEDRILALREQVVR-LIP 455 (518)
Q Consensus 378 ~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~I-pe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~-v~~ 455 (518)
.+.|+||+|.+|++.|.- +... ...-|+..+-.+.+ ..+++.+ .|...|+ .++++++|.++..+ +..
T Consensus 11 ~~~r~~E~~a~G~~vi~~-~~~~-----~~~~~~~~~~~~~~~~~~el~~---~i~~ll~--~~~~~~~ia~~a~~~v~~ 79 (92)
T PF13524_consen 11 PNMRIFEAMACGTPVISD-DSPG-----LREIFEDGEHIITYNDPEELAE---KIEYLLE--NPEERRRIAKNARERVLK 79 (92)
T ss_pred CchHHHHHHHCCCeEEEC-ChHH-----HHHHcCCCCeEEEECCHHHHHH---HHHHHHC--CHHHHHHHHHHHHHHHHH
Confidence 457999999999865443 3321 11125555445555 3445554 2444444 67888888888755 333
Q ss_pred eeEE
Q 046652 456 SVIY 459 (518)
Q Consensus 456 ~f~Y 459 (518)
++-|
T Consensus 80 ~~t~ 83 (92)
T PF13524_consen 80 RHTW 83 (92)
T ss_pred hCCH
Confidence 4444
No 40
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=79.42 E-value=1.7 Score=44.90 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=56.8
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecC--CCCCeeEEEEeCCccccccccHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLP--KNYSSYSLYIPVRDVKDWRVNVNET 434 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LP--fDw~~fSV~Ipe~dv~~~~~~l~~i 434 (518)
.+..+.|+.+..++.|.-.......+.|||.+|| |||..+-. ...+ ..-.+-.+.++..+..+-.-.|..+
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~------~g~~~~v~~~~~G~lv~~~d~~~la~~i~~l 342 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVN------YGPSEIIEDGENGYLVPKGDIEALAEAIIEL 342 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCC------CCcHHHcccCCCceEeCCCcHHHHHHHHHHH
Confidence 3556778899999988744333467999999999 77776631 1111 1223445566655554411123444
Q ss_pred HccCCHHHHHHHHHHHHhhcceeEE
Q 046652 435 LVGISEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 435 L~~Is~e~i~~Mr~~l~~v~~~f~Y 459 (518)
|. .++.+.+|+++.++...+|-+
T Consensus 343 l~--~~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 343 LN--DPKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHhhH
Confidence 44 357888888887766555443
No 41
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=79.11 E-value=11 Score=37.80 Aligned_cols=93 Identities=9% Similarity=0.099 Sum_probs=53.2
Q ss_pred cccccccccceEEEccCCC------CCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcccccccc
Q 046652 357 VNVMKMFQNSVFCLQPPGD------SYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gd------s~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~ 430 (518)
.+..+.|+++.+++.|... ......++|||.+||-.| .++..... ++--+ ..-...+++.+..+
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~----~~i~~-~~~g~~~~~~~~~~---- 316 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVSGIP----ELVED-GETGLLVPPGDPEA---- 316 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCCCcc----hhhhC-CCceEEeCCCCHHH----
Confidence 4677888999999998643 233567999999998655 45432111 11112 22345555555444
Q ss_pred HHHHHccC--CHHHHHHHHHHHHh-hcceeEE
Q 046652 431 VNETLVGI--SEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 431 l~~iL~~I--s~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
+.+.|..+ .++++.+|.++..+ +..+|-|
T Consensus 317 l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 317 LADAIERLLDDPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 33333332 35667778777654 3344433
No 42
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=78.26 E-value=11 Score=38.26 Aligned_cols=41 Identities=15% Similarity=0.348 Sum_probs=29.3
Q ss_pred cccccccccceEEEccCCC-CCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPGD-SYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gd-s~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~ 300 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDN 300 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecC
Confidence 3456677777777777543 333456999999999 7777764
No 43
>PRK14099 glycogen synthase; Provisional
Probab=77.36 E-value=10 Score=41.74 Aligned_cols=92 Identities=10% Similarity=0.055 Sum_probs=53.8
Q ss_pred cccccc-ccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCC--------eeEEEEeCCcccccc
Q 046652 358 NVMKMF-QNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYS--------SYSLYIPVRDVKDWR 428 (518)
Q Consensus 358 ~y~~~m-~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~--------~fSV~Ipe~dv~~~~ 428 (518)
+....+ +.|.+.+.|.=..+......|||.+||+||+-.-+.. -+.-.+.. .-.+.++..|...
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl-----~d~V~~~~~~~~~~~~~~G~l~~~~d~~~-- 433 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGL-----ADTVVDANEMAIATGVATGVQFSPVTADA-- 433 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCc-----cceeecccccccccCCCceEEeCCCCHHH--
Confidence 334445 4688888887666666779999999999988433210 01001221 3466677766654
Q ss_pred ccHHHHHcc----C-CHHHHHHHHHHHHhhcceeEEe
Q 046652 429 VNVNETLVG----I-SEDRILALREQVVRLIPSVIYA 460 (518)
Q Consensus 429 ~~l~~iL~~----I-s~e~i~~Mr~~l~~v~~~f~Y~ 460 (518)
+.+.|.. + .++.+.+|+++.. ...|-|.
T Consensus 434 --La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~ 466 (485)
T PRK14099 434 --LAAALRKTAALFADPVAWRRLQRNGM--TTDVSWR 466 (485)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChH
Confidence 4444432 2 3567778877763 2444443
No 44
>PHA02844 putative transmembrane protein; Provisional
Probab=76.52 E-value=2.3 Score=34.70 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=24.6
Q ss_pred cccccccchhhHHHHHHHHHHHHHhhcccccc
Q 046652 3 GINCWSQQLGFAILISFVLCFVLLCFDYSALT 34 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 34 (518)
+.-++.++.++.|.|.++.|.++|||.|=-+.
T Consensus 41 ~~~~~~~~~~~ii~i~~v~~~~~~~flYLK~~ 72 (75)
T PHA02844 41 NNVCSSSTKIWILTIIFVVFATFLTFLYLKAV 72 (75)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 44556677777788999999999999885443
No 45
>PLN02949 transferase, transferring glycosyl groups
Probab=76.36 E-value=14 Score=40.65 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=51.7
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV 436 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~ 436 (518)
.+..+.|+++.+++.|.-+...-.-+.|||.+||+||.-..+.... .+..+.+-.. .-++. .++.+-.-.|.++|.
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~--eIV~~~~~g~-tG~l~-~~~~~la~ai~~ll~ 421 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM--DIVLDEDGQQ-TGFLA-TTVEEYADAILEVLR 421 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc--eeeecCCCCc-ccccC-CCHHHHHHHHHHHHh
Confidence 4566788889888877643333357999999998877765431000 0111211011 11111 133320012333333
Q ss_pred cCCHHHHHHHHHHHHhhcceeEE
Q 046652 437 GISEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v~~~f~Y 459 (518)
. ++++..+|+++.++...+|-+
T Consensus 422 ~-~~~~r~~m~~~ar~~~~~FS~ 443 (463)
T PLN02949 422 M-RETERLEIAAAARKRANRFSE 443 (463)
T ss_pred C-CHHHHHHHHHHHHHHHHHcCH
Confidence 2 567778898888765555443
No 46
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=75.83 E-value=8.8 Score=41.06 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=50.0
Q ss_pred CcccccccccceEEEccC----CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCC-CCeeEEEEeCCcccccccc
Q 046652 356 PVNVMKMFQNSVFCLQPP----GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKN-YSSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~----Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfD-w~~fSV~Ipe~dv~~~~~~ 430 (518)
..++.+.|..|..++.|. |.+. ...++|||.+|+ |||.++...- -++=-| -.-+.| + +..+-.-.
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~~-p~~~~Eama~G~-PVI~s~~~~~----~eiv~~~~~G~lv--~--d~~~la~~ 374 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLDL-PMKVVDMFGCGL-PVCALDFKCI----DELVKHGENGLVF--G--DSEELAEQ 374 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccCC-cHHHHHHHHcCC-CEEEeCCCCH----HHHhcCCCCEEEE--C--CHHHHHHH
Confidence 356677888888877532 3332 456999999998 9999875210 011112 233333 2 33320002
Q ss_pred HHHHHcc-CCHHHHHHHHHHHHhhc
Q 046652 431 VNETLVG-ISEDRILALREQVVRLI 454 (518)
Q Consensus 431 l~~iL~~-Is~e~i~~Mr~~l~~v~ 454 (518)
|..+|.. .++++..+|.++.++..
T Consensus 375 i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 375 LIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 4444443 12778888988876543
No 47
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=75.40 E-value=12 Score=40.92 Aligned_cols=90 Identities=13% Similarity=0.057 Sum_probs=54.3
Q ss_pred CcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCC-----CeeEEEEeCCcccccccc
Q 046652 356 PVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNY-----SSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw-----~~fSV~Ipe~dv~~~~~~ 430 (518)
..+..+.|..+..++.|.-.......+.|||.+|| |||.+|..... ++--+. ....+.++..|..+-.-.
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~~----elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSCR----ELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCChH----HHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 34566778888888887533223457999999999 88888753211 111121 235667777766541112
Q ss_pred HHHHHccCCHHHHHHHHHHHHh
Q 046652 431 VNETLVGISEDRILALREQVVR 452 (518)
Q Consensus 431 l~~iL~~Is~e~i~~Mr~~l~~ 452 (518)
|.++|. .++...+|.++.++
T Consensus 436 i~~ll~--~~~~~~~~~~~a~~ 455 (475)
T cd03813 436 ILRLLK--DPELRRAMGEAGRK 455 (475)
T ss_pred HHHHhc--CHHHHHHHHHHHHH
Confidence 333333 46778888877754
No 48
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=75.25 E-value=37 Score=34.26 Aligned_cols=87 Identities=10% Similarity=0.090 Sum_probs=52.1
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHcc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVG 437 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~ 437 (518)
.+.+.|+.|.+.+.|.........+.|||.+||- ||.++...... + ..-..-.+.++..+..+-.-.|.+++.
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~~~~e----~-~~~~~~g~~~~~~~~~~~~~~l~~l~~- 329 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVGGIPD----I-VDHGVTGYLAKPGDPEDLAEGIEWLLA- 329 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCCCChh----h-eeCCCceEEeCCCCHHHHHHHHHHHHh-
Confidence 4556799999999998765556789999999985 66665422211 1 111234555665555431112333333
Q ss_pred CCHHHHHHHHHHHHh
Q 046652 438 ISEDRILALREQVVR 452 (518)
Q Consensus 438 Is~e~i~~Mr~~l~~ 452 (518)
.+++..+|.++.++
T Consensus 330 -~~~~~~~~~~~~~~ 343 (365)
T cd03825 330 -DPDEREELGEAARE 343 (365)
T ss_pred -CHHHHHHHHHHHHH
Confidence 35667788777654
No 49
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=73.33 E-value=18 Score=37.38 Aligned_cols=93 Identities=8% Similarity=-0.006 Sum_probs=51.9
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHcc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVG 437 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~ 437 (518)
...+.|+.+.+++.|.........+.|||.+| +|||.++.... -++=-+.. -.+.++. +..+-.-.|.+++.
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~~----~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~- 363 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGGP----LETVVDGE-TGFLCEP-TPEEFAEAMLKLAN- 363 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCCc----HHHhccCC-ceEEeCC-CHHHHHHHHHHHHh-
Confidence 34677899999998876554456789999999 67777765211 11111322 2333443 33320012333333
Q ss_pred CCHHHHHHHHHHHHh-hcceeEE
Q 046652 438 ISEDRILALREQVVR-LIPSVIY 459 (518)
Q Consensus 438 Is~e~i~~Mr~~l~~-v~~~f~Y 459 (518)
.++...+|+++.++ +...|-|
T Consensus 364 -~~~~~~~~~~~a~~~~~~~~s~ 385 (392)
T cd03805 364 -DPDLADRMGAAGRKRVKEKFST 385 (392)
T ss_pred -ChHHHHHHHHHHHHHHHHhcCH
Confidence 24567788777655 3455544
No 50
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=73.22 E-value=9.8 Score=39.55 Aligned_cols=93 Identities=11% Similarity=0.043 Sum_probs=54.5
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCc-cccccccHHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRD-VKDWRVNVNETL 435 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~d-v~~~~~~l~~iL 435 (518)
....+.++.+..++.|.........+.|||.+| +|||.++..... ++-.|. ...+.++..+ +.. .|.++|
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~----~~i~~~-~~g~~~~~~~~~a~---~i~~ll 335 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP----LQIEDG-ETGFLVDTVEEAAV---RILYLL 335 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch----hhcccC-CceEEeCCcHHHHH---HHHHHH
Confidence 455677888999888875444446799999999 699998753111 110122 2222333222 221 244555
Q ss_pred ccCCHHHHHHHHHHHHhh-cceeEEe
Q 046652 436 VGISEDRILALREQVVRL-IPSVIYA 460 (518)
Q Consensus 436 ~~Is~e~i~~Mr~~l~~v-~~~f~Y~ 460 (518)
. .++...+|.++.++. ..+|-|.
T Consensus 336 ~--~~~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 336 R--DPELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred c--CHHHHHHHHHHHHHHHHHHcCHH
Confidence 4 367778888887663 4455543
No 51
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=72.61 E-value=4.6 Score=40.50 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=31.3
Q ss_pred ccccccccceEEEccCC-CCCCCchHHHHHHhCceeEEecCC
Q 046652 358 NVMKMFQNSVFCLQPPG-DSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~G-ds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
+..+.|+.+.+++.|.- .......++|||.+|+ |||.+|.
T Consensus 236 ~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~ 276 (335)
T cd03802 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRR 276 (335)
T ss_pred HHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCC
Confidence 34677899999999864 2223467999999997 9999886
No 52
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=71.35 E-value=17 Score=36.67 Aligned_cols=93 Identities=12% Similarity=0.116 Sum_probs=56.0
Q ss_pred cccccccccceEEEccC---CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHH
Q 046652 357 VNVMKMFQNSVFCLQPP---GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNE 433 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~---Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~ 433 (518)
.++.+.++.+..++.|. +.+. ...+.|||.+| +|||.++....... + -+.......++..|..+ +.+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~-g~~~~Ea~~~g-~Pvi~~~~~~~~~~-i---~~~~~~g~~~~~~d~~~----~~~ 324 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAF-GIVLLEAMAFG-KPVISTEIGTGGSY-V---NLHGVTGLVVPPGDPAA----LAE 324 (357)
T ss_pred HHHHHHHHhCCEEEeCCccccccc-chHHHHHHHcC-CCEEecCCCCchhH-H---hhCCCceEEeCCCCHHH----HHH
Confidence 34677888899999885 2333 34699999997 57777765311110 0 02245566666666554 334
Q ss_pred HHccC--CHHHHHHHHHHHHhh-cceeEE
Q 046652 434 TLVGI--SEDRILALREQVVRL-IPSVIY 459 (518)
Q Consensus 434 iL~~I--s~e~i~~Mr~~l~~v-~~~f~Y 459 (518)
.+..+ .+++..+|+++.++. .++|-+
T Consensus 325 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 325 AIRRLLEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHhcch
Confidence 33332 467888898888764 344433
No 53
>PHA02819 hypothetical protein; Provisional
Probab=71.14 E-value=3.8 Score=33.15 Aligned_cols=30 Identities=7% Similarity=-0.005 Sum_probs=24.0
Q ss_pred CcccccccchhhHHHHHHHHHHHHHhhccc
Q 046652 2 AGINCWSQQLGFAILISFVLCFVLLCFDYS 31 (518)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 31 (518)
++..++.+.-|+.|.+.++.|.++|||.|=
T Consensus 38 ~~~~~~~~~~~~ii~l~~~~~~~~~~flYL 67 (71)
T PHA02819 38 KKTKKSFLRYYLIIGLVTIVFVIIFIIFYL 67 (71)
T ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777888999999999999884
No 54
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=68.44 E-value=19 Score=38.82 Aligned_cols=84 Identities=11% Similarity=0.132 Sum_probs=50.0
Q ss_pred cccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCC-----eeEEEEeCCccccccccHHH
Q 046652 359 VMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYS-----SYSLYIPVRDVKDWRVNVNE 433 (518)
Q Consensus 359 y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~-----~fSV~Ipe~dv~~~~~~l~~ 433 (518)
..+.++.+.+.+.|.-..+......|||.+||.||.-.-+. . -+.-.|.. .-.+.++..+... +.+
T Consensus 364 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg-~----~e~v~~~~~~~~~~~G~~~~~~~~~~----l~~ 434 (476)
T cd03791 364 AHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGG-L----ADTVIDYNEDTGEGTGFVFEGYNADA----LLA 434 (476)
T ss_pred HHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCC-c----cceEeCCcCCCCCCCeEEeCCCCHHH----HHH
Confidence 34677889999999766666677999999999987644331 0 01111322 1355566655443 333
Q ss_pred HHccC-----CHHHHHHHHHHHH
Q 046652 434 TLVGI-----SEDRILALREQVV 451 (518)
Q Consensus 434 iL~~I-----s~e~i~~Mr~~l~ 451 (518)
.|..+ .++++.+|.++..
T Consensus 435 ~i~~~l~~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 435 ALRRALALYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHh
Confidence 33322 2566777776653
No 55
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=66.48 E-value=6.9 Score=41.27 Aligned_cols=92 Identities=14% Similarity=0.226 Sum_probs=53.5
Q ss_pred ccccccccceEEEccC--CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHH
Q 046652 358 NVMKMFQNSVFCLQPP--GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETL 435 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~--Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL 435 (518)
+....++.+..++.|. |.+. ...+.|||.+|| |||.++... -.+.-. ..-.+.++ .+..+-.-.|.++|
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~~-----~~i~~~-~~~g~lv~-~~~~~la~ai~~ll 360 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEAA-----EGIDAL-PGAELLVA-ADPADFAAAILALL 360 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCccc-----cccccc-CCcceEeC-CCHHHHHHHHHHHH
Confidence 4566788888888884 4443 356999999998 999987421 011111 12344555 44443001233444
Q ss_pred ccCCHHHHHHHHHHHHh-hcceeEEe
Q 046652 436 VGISEDRILALREQVVR-LIPSVIYA 460 (518)
Q Consensus 436 ~~Is~e~i~~Mr~~l~~-v~~~f~Y~ 460 (518)
. .++...+|.++.++ +..+|-|.
T Consensus 361 ~--~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 361 A--NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred c--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 3 35667888888765 34556554
No 56
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=66.22 E-value=10 Score=37.14 Aligned_cols=63 Identities=11% Similarity=0.095 Sum_probs=39.8
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcccc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKD 426 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~ 426 (518)
+..+.+..+.++++|.-.......+.|||.+||. ||.++..... ++ ..-....+.++.++...
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~~~~----e~-i~~~~~g~~~~~~~~~~ 318 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCPGPR----EI-LEDGENGLLVPVGDEAA 318 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCCChH----HH-hcCCCceEEECCCCHHH
Confidence 4567899999999987544445679999999985 5666542110 11 12234555666666554
No 57
>PHA03054 IMV membrane protein; Provisional
Probab=66.01 E-value=5.2 Score=32.36 Aligned_cols=28 Identities=21% Similarity=0.206 Sum_probs=22.8
Q ss_pred cccccccchhhHHHHHHHHHHHHHhhcc
Q 046652 3 GINCWSQQLGFAILISFVLCFVLLCFDY 30 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 30 (518)
+..++.+.-|+.|.+.++.|.++|||.|
T Consensus 41 ~~~~~~~~~~~ii~l~~v~~~~l~~flY 68 (72)
T PHA03054 41 NNTGCWGWYWLIIIFFIVLILLLLIYLY 68 (72)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777777788889999999999987
No 58
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=65.80 E-value=11 Score=39.24 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=28.2
Q ss_pred cccccccceEEEccCCCCCCCchHHHHHHhCceeEEecC
Q 046652 359 VMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHP 397 (518)
Q Consensus 359 y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd 397 (518)
+.+.++.+..++.|.........+.|||.+| +|||.++
T Consensus 251 ~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~ 288 (359)
T PRK09922 251 VQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSD 288 (359)
T ss_pred HHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeC
Confidence 4555667788888765444457799999999 6888887
No 59
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=64.37 E-value=14 Score=39.04 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=30.0
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.+..+.|..+..++.|.-.......+.|||.+|| |||.++.
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~ 301 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRV 301 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCC
Confidence 4667788888888887643333367999999997 5666664
No 60
>PHA01630 putative group 1 glycosyl transferase
Probab=64.04 E-value=6 Score=41.33 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=29.3
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.+..+.++.+..++.|.-......-+.|||.+|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 3456678899999888644333456999999997 5666654
No 61
>PHA02975 hypothetical protein; Provisional
Probab=60.36 E-value=7.2 Score=31.40 Aligned_cols=26 Identities=27% Similarity=0.460 Sum_probs=20.5
Q ss_pred ccccchhhHHHHHHHHHHHHHhhccc
Q 046652 6 CWSQQLGFAILISFVLCFVLLCFDYS 31 (518)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 31 (518)
++.+.-|+.|.+.|+.|.++|+|.|=
T Consensus 40 ~~~~~~~~ii~i~~v~~~~~~~flYL 65 (69)
T PHA02975 40 KSSLSIILIIFIIFITCIAVFTFLYL 65 (69)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555677788999999999999884
No 62
>PRK10307 putative glycosyl transferase; Provisional
Probab=60.02 E-value=26 Score=36.95 Aligned_cols=92 Identities=8% Similarity=0.014 Sum_probs=56.4
Q ss_pred cccccccccceEEEccCCCCC----CCchHHHHHHhCceeEEecCCCccccceeecC--CCCCeeEEEEeCCcccccccc
Q 046652 357 VNVMKMFQNSVFCLQPPGDSY----TRKSVFDTILAGCIPVFFHPGTAYAQYLWHLP--KNYSSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~----~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LP--fDw~~fSV~Ipe~dv~~~~~~ 430 (518)
.+..+.|+.+..++.|.=.+. ....++|||.+| +|||.++... ..++ .. .-.+.++..|+.+
T Consensus 295 ~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g-----~~~~~~i~--~~G~~~~~~d~~~---- 362 (412)
T PRK10307 295 DRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPG-----TELGQLVE--GIGVCVEPESVEA---- 362 (412)
T ss_pred HHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCC-----chHHHHHh--CCcEEeCCCCHHH----
Confidence 456678888888888742221 123589999999 6888876421 0111 12 3466667777665
Q ss_pred HHHHHccC--CHHHHHHHHHHHHh-hcceeEEe
Q 046652 431 VNETLVGI--SEDRILALREQVVR-LIPSVIYA 460 (518)
Q Consensus 431 l~~iL~~I--s~e~i~~Mr~~l~~-v~~~f~Y~ 460 (518)
+.+.|..+ .++...+|+++.++ +..+|-|.
T Consensus 363 la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 363 LVAAIAALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 55555544 35677888888765 33455554
No 63
>PHA02650 hypothetical protein; Provisional
Probab=59.53 E-value=7.8 Score=32.06 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=25.1
Q ss_pred cccccccchhhHHHHHHHHHHHHHhhcccccccCc
Q 046652 3 GINCWSQQLGFAILISFVLCFVLLCFDYSALTSTT 37 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 37 (518)
+..++.+.-|+.|.|.++.|.+||||.|=-+..-+
T Consensus 42 ~~~~~~~~~~~ii~i~~v~i~~l~~flYLK~~~r~ 76 (81)
T PHA02650 42 KSVSWFNGQNFIFLIFSLIIVALFSFFVFKGYTRN 76 (81)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44566666677777888888888899986555443
No 64
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=56.78 E-value=9.5 Score=41.08 Aligned_cols=94 Identities=9% Similarity=0.130 Sum_probs=50.3
Q ss_pred cccccccc----eEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHH
Q 046652 359 VMKMFQNS----VFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNET 434 (518)
Q Consensus 359 y~~~m~~S----~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~i 434 (518)
..+.|+.+ ...+.|.-......-+.|||.+|| |||.++..... ++ .+-.+-.+.++..|...-.-.|.++
T Consensus 330 ~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg~~----ei-v~~~~~G~lv~~~d~~~la~~i~~l 403 (439)
T TIGR02472 330 VPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGGPR----DI-IANCRNGLLVDVLDLEAIASALEDA 403 (439)
T ss_pred HHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCCcH----HH-hcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 34445544 333444322333456999999999 99999853111 10 1223445667776655411123334
Q ss_pred HccCCHHHHHHHHHHHHh-hcceeEEe
Q 046652 435 LVGISEDRILALREQVVR-LIPSVIYA 460 (518)
Q Consensus 435 L~~Is~e~i~~Mr~~l~~-v~~~f~Y~ 460 (518)
|. .+++..+|.++.++ +..+|-|.
T Consensus 404 l~--~~~~~~~~~~~a~~~~~~~fsw~ 428 (439)
T TIGR02472 404 LS--DSSQWQLWSRNGIEGVRRHYSWD 428 (439)
T ss_pred Hh--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 43 35666777776654 44555543
No 65
>PHA02692 hypothetical protein; Provisional
Probab=56.62 E-value=11 Score=30.43 Aligned_cols=28 Identities=29% Similarity=0.217 Sum_probs=18.1
Q ss_pred ccccccchh-hHHHHHHHHHHHHHhhccc
Q 046652 4 INCWSQQLG-FAILISFVLCFVLLCFDYS 31 (518)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~~ 31 (518)
..++.+..+ +++.+.++.|.++|||.|=
T Consensus 39 ~~~~~~~~~~ii~~~~~~~~~vll~flYL 67 (70)
T PHA02692 39 RSKGVPWTTVFLIGLIAAAIGVLLCFHYL 67 (70)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444 4444788889999999873
No 66
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=55.67 E-value=8.6 Score=43.41 Aligned_cols=105 Identities=12% Similarity=0.163 Sum_probs=60.3
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCcc---ccccccHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDV---KDWRVNVNE 433 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv---~~~~~~l~~ 433 (518)
.+|.+.++.+.-++.|.-..+...-..|||.+| +|||.++......+.-+.--+..+..|.|...+- .+..-.|.+
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 468899999999999976666566799999999 6999998742211100111133356777763221 110001333
Q ss_pred HHcc---CCHHHHHHHHHHHHhhcceeEEeCC
Q 046652 434 TLVG---ISEDRILALREQVVRLIPSVIYADP 462 (518)
Q Consensus 434 iL~~---Is~e~i~~Mr~~l~~v~~~f~Y~~p 462 (518)
.|.. -+..+....|....+....|.|..-
T Consensus 545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~ 576 (590)
T cd03793 545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRNL 576 (590)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHH
Confidence 3332 3444444444444477788887653
No 67
>PLN02939 transferase, transferring glycosyl groups
Probab=53.86 E-value=21 Score=42.68 Aligned_cols=94 Identities=7% Similarity=0.056 Sum_probs=54.1
Q ss_pred cccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCC--------eeEEEEeCCccccccccHH
Q 046652 361 KMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYS--------SYSLYIPVRDVKDWRVNVN 432 (518)
Q Consensus 361 ~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~--------~fSV~Ipe~dv~~~~~~l~ 432 (518)
..++.|.+++.|.=..+.---..+||.+||+||+..-+.. -+.-.|++ .-.+.++..|...-.-.|.
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL-----~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~ 926 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL-----NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALE 926 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC-----cceeecCCccccccCCCceEEecCCCHHHHHHHHH
Confidence 5789999999997666666779999999999998654421 11112221 2344555555543000122
Q ss_pred HHHccC--CHHHHHHHHHHHHhhcceeEEeC
Q 046652 433 ETLVGI--SEDRILALREQVVRLIPSVIYAD 461 (518)
Q Consensus 433 ~iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~ 461 (518)
..|..+ .++.+.+|+++. +...|-|..
T Consensus 927 rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 927 RAFNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 333322 467788887654 234454433
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=46.80 E-value=47 Score=35.39 Aligned_cols=86 Identities=15% Similarity=0.217 Sum_probs=45.1
Q ss_pred cccccccc---eEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeC-CccccccccHHHH
Q 046652 359 VMKMFQNS---VFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPV-RDVKDWRVNVNET 434 (518)
Q Consensus 359 y~~~m~~S---~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe-~dv~~~~~~l~~i 434 (518)
..+.++.+ .|++.....+ ....+.|||.+|+ |||.++-..- -++--|- .-.+.++. .+..+-.-.|.++
T Consensus 302 ~~~~~~~~~~~v~v~~S~~Eg-~p~~llEAma~G~-PVIas~vgg~----~e~i~~~-~~G~l~~~~~~~~~la~~I~~l 374 (407)
T cd04946 302 VYKLYKENPVDVFVNLSESEG-LPVSIMEAMSFGI-PVIATNVGGT----PEIVDNG-GNGLLLSKDPTPNELVSSLSKF 374 (407)
T ss_pred HHHHHhhcCCCEEEeCCcccc-ccHHHHHHHHcCC-CEEeCCCCCc----HHHhcCC-CcEEEeCCCCCHHHHHHHHHHH
Confidence 34555442 2333333334 3467999999995 9998875211 1111122 23344443 2443311124444
Q ss_pred HccCCHHHHHHHHHHHHhh
Q 046652 435 LVGISEDRILALREQVVRL 453 (518)
Q Consensus 435 L~~Is~e~i~~Mr~~l~~v 453 (518)
+. .+++..+|+++.++.
T Consensus 375 l~--~~~~~~~m~~~ar~~ 391 (407)
T cd04946 375 ID--NEEEYQTMREKAREK 391 (407)
T ss_pred Hh--CHHHHHHHHHHHHHH
Confidence 44 578889998887663
No 69
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=42.22 E-value=2.4e+02 Score=28.47 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=58.5
Q ss_pred cccCCceEEEeccCCCCCCChhHHHHHHHHHhhCCCcE--EEee-cCCCCCcCCC-------CcccccccccceEEEccC
Q 046652 304 RKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLC--RLID-CNYGATNCDN-------PVNVMKMFQNSVFCLQPP 373 (518)
Q Consensus 304 ~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~--~~~~-c~~g~~~c~~-------~~~y~~~m~~S~FCL~P~ 373 (518)
+-+.|.-.++|+|+... +..|+.|++...+.++.+ .+.. |.. ..|.. ...-++...+-||=+..-
T Consensus 79 pW~~K~~~a~WRG~~~~---~~~R~~Lv~~~~~~p~~~da~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~yKyli~~d 153 (256)
T smart00672 79 KWSDKNAYAYWRGNPTV---ASERLDLIKCNQSSPELVNARITIQDWP--GKCDGEEDAPGFKKSPLEEQCKHKYKINIE 153 (256)
T ss_pred CccccCcCccccCCCCC---CcchHHHHHHhcCCcccceeEEEEecCC--CCChHHhcccCcCCCCHHHHhhcceEEecC
Confidence 34567788999997632 228999998877765422 3332 221 13311 112244556788999999
Q ss_pred CCCCCCchHHHHHHhCceeEEecCC
Q 046652 374 GDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 374 Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
|.+. |-|+.=-|.+++|++.....
T Consensus 154 G~~~-S~rl~~~l~~~Svvl~~~~~ 177 (256)
T smart00672 154 GVAW-SVRLKYILACDSVVLKVKPE 177 (256)
T ss_pred Cccc-hhhHHHHHhcCceEEEeCCc
Confidence 9886 57899899999998887753
No 70
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=39.99 E-value=21 Score=32.06 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=12.6
Q ss_pred hhhHHHHHHHHHH-HHHhhccccccc
Q 046652 11 LGFAILISFVLCF-VLLCFDYSALTS 35 (518)
Q Consensus 11 ~~~~~~~~~~~~~-~~l~~~~~~~~~ 35 (518)
||++|++.|+++| ++.|++......
T Consensus 4 l~~iii~~i~l~~~~~~~~~rRR~r~ 29 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLFYCHNRRRRRR 29 (130)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444444333333 334477777765
No 71
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=38.79 E-value=64 Score=36.55 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=30.8
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
+..+.|..+..++.|.=.......+.|||.+|| |||.++.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdv 504 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPA 504 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCC
Confidence 456678888887777544445578999999999 9998875
No 72
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=37.18 E-value=1.2e+02 Score=30.37 Aligned_cols=42 Identities=12% Similarity=0.011 Sum_probs=32.4
Q ss_pred CcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 356 PVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
..+..+.+..+.++++|.-.......+.|||.+||-. |.++.
T Consensus 257 ~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~~ 298 (358)
T cd03812 257 RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSDT 298 (358)
T ss_pred cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEcC
Confidence 3456788999999999976555667899999999855 45553
No 73
>PHA01633 putative glycosyl transferase group 1
Probab=36.50 E-value=24 Score=37.21 Aligned_cols=40 Identities=18% Similarity=0.351 Sum_probs=31.3
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
+..+.++.+.+.+.|.-......-+.|||.+|| |||.++-
T Consensus 216 dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 216 YIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 456778888888888654444567999999999 9999875
No 74
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=35.56 E-value=70 Score=38.85 Aligned_cols=92 Identities=11% Similarity=0.209 Sum_probs=53.3
Q ss_pred cccccccc-----eEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHH
Q 046652 359 VMKMFQNS-----VFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNE 433 (518)
Q Consensus 359 y~~~m~~S-----~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~ 433 (518)
..+.++.+ .|++-..-.+. -.-+.|||.+| +|||.++...- -++ ..-..-.+.|+..|... |.+
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgF-GLvlLEAMAcG-lPVVASdvGG~----~EI-I~~g~nGlLVdP~D~ea----LA~ 629 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPF-GLTLIEAAAHG-LPMVATKNGGP----VDI-HRVLDNGLLVDPHDQQA----IAD 629 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCC-CHHHHHHHHhC-CCEEEeCCCCc----HHH-hccCCcEEEECCCCHHH----HHH
Confidence 34455544 45443333333 36699999999 59999875211 011 12234566777777654 444
Q ss_pred HHccC--CHHHHHHHHHHHHhhcceeEEeC
Q 046652 434 TLVGI--SEDRILALREQVVRLIPSVIYAD 461 (518)
Q Consensus 434 iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~ 461 (518)
.|..+ .++...+|.++.++..++|-|..
T Consensus 630 AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 630 ALLKLVADKQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHCCHHH
Confidence 33332 46778889988877666665543
No 75
>PHA02691 hypothetical protein; Provisional
Probab=35.34 E-value=34 Score=30.12 Aligned_cols=53 Identities=4% Similarity=0.063 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHHHHHhhcccccccCccccccC--CCCCCccccccccCC--Ccccccc
Q 046652 12 GFAILISFVLCFVLLCFDYSALTSTTTTTSHS--GHSTPLVNNFANANA--NAHAIIT 65 (518)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~ 65 (518)
|+ +=+.|+..||+||.=++..+..-..-+|. +.+++..-|..|+.+ ..+.+++
T Consensus 3 ~l-~~l~fFi~FL~l~Y~~ny~PTNKlqlaV~~l~~e~~~~k~~d~~~p~~l~s~iF~ 59 (110)
T PHA02691 3 WA-LEVALFAAFLAAAYVLTFLPTNKMQLAVRELADARAWRQRTDAQLDGVSESVLFP 59 (110)
T ss_pred hH-HHHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhhhHHhhccccCcceeeEEEec
Confidence 66 55666667777775555566655544444 666777666655543 2334444
No 76
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=34.34 E-value=3.1e+02 Score=29.52 Aligned_cols=108 Identities=9% Similarity=0.151 Sum_probs=63.3
Q ss_pred ccCCceEEEeccCCCCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCC---------CCcccccccccceEEEccCCC
Q 046652 305 KRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCD---------NPVNVMKMFQNSVFCLQPPGD 375 (518)
Q Consensus 305 ~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~---------~~~~y~~~m~~S~FCL~P~Gd 375 (518)
...|+.+.+-.|+.... ..+=+.+.+.|.+.+..+.+.. ......+. +.....+.+.+|.=-.+..|.
T Consensus 234 ~~d~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~-~~~~~~~~~~p~n~~v~~~~p~~~~l~~ad~vI~hGG~ 310 (406)
T COG1819 234 PADRPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSL-GGARDTLVNVPDNVIVADYVPQLELLPRADAVIHHGGA 310 (406)
T ss_pred cCCCCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEec-cccccccccCCCceEEecCCCHHHHhhhcCEEEecCCc
Confidence 56788888878865322 3344455666666643322211 11111111 123445678888877777765
Q ss_pred CCCCchHHHHHHhCceeEEecCCCccccceeecCC-----CCCeeEEEEeCCcccc
Q 046652 376 SYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPK-----NYSSYSLYIPVRDVKD 426 (518)
Q Consensus 376 s~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPf-----Dw~~fSV~Ipe~dv~~ 426 (518)
+ .+.+||.+| ||+|+-+.. ++.|. .+..+-+.++-+.+..
T Consensus 311 g----tt~eaL~~g-vP~vv~P~~------~DQ~~nA~rve~~G~G~~l~~~~l~~ 355 (406)
T COG1819 311 G----TTSEALYAG-VPLVVIPDG------ADQPLNAERVEELGAGIALPFEELTE 355 (406)
T ss_pred c----hHHHHHHcC-CCEEEecCC------cchhHHHHHHHHcCCceecCcccCCH
Confidence 5 388999888 898887763 55554 4566777777655554
No 77
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=32.63 E-value=1.9e+02 Score=31.03 Aligned_cols=90 Identities=12% Similarity=0.167 Sum_probs=49.9
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeC-CccccccccHHHHHc
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPV-RDVKDWRVNVNETLV 436 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe-~dv~~~~~~l~~iL~ 436 (518)
+..+++.++.+-+.-.=+..---.+.|+|++|-|||.=..+-- -.-++.|.|-+.-...-+. .|..+ .+.+|+.
T Consensus 349 ~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP--~lDIV~~~~G~~tGFla~t~~EYaE---~iLkIv~ 423 (465)
T KOG1387|consen 349 KLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGP--LLDIVTPWDGETTGFLAPTDEEYAE---AILKIVK 423 (465)
T ss_pred HHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCC--ceeeeeccCCccceeecCChHHHHH---HHHHHHH
Confidence 4577888888888866554444679999999999987654410 0113344333222211111 11111 2444444
Q ss_pred cCCHHHHHHHHHHHHhh
Q 046652 437 GISEDRILALREQVVRL 453 (518)
Q Consensus 437 ~Is~e~i~~Mr~~l~~v 453 (518)
- ..++...||++-+.-
T Consensus 424 ~-~~~~r~~~r~~AR~s 439 (465)
T KOG1387|consen 424 L-NYDERNMMRRNARKS 439 (465)
T ss_pred c-CHHHHHHHHHHHHHH
Confidence 3 455577787776543
No 78
>PLN02316 synthase/transferase
Probab=30.57 E-value=52 Score=39.86 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=32.2
Q ss_pred cccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 361 KMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 361 ~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
..++.+.+.+.|.=..+......+||.+||+||+-.-+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC
Confidence 57899999999976677778899999999999996544
No 79
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=30.44 E-value=1.4e+02 Score=31.70 Aligned_cols=87 Identities=9% Similarity=0.106 Sum_probs=47.5
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCCccccceeecCC-CCCeeEEEEeC-CccccccccHHHHH
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPK-NYSSYSLYIPV-RDVKDWRVNVNETL 435 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPf-Dw~~fSV~Ipe-~dv~~~~~~l~~iL 435 (518)
+..+.|+.|.+++..+|. ..+.||+.+|+ |||+.+... .|...-.-+ .-..+.+.+.. +++.+ .|.++|
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~p-gqe~~N~~~~~~~G~g~~~~~~~~l~~---~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPAP-GQELENALYFEEKGFGKIADTPEEAIK---IVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCCC-CcchhHHHHHHhCCcEEEeCCHHHHHH---HHHHHh
Confidence 455788999998885552 24899999984 888875310 000000000 11234444321 12221 133444
Q ss_pred ccCCHHHHHHHHHHHHhhcc
Q 046652 436 VGISEDRILALREQVVRLIP 455 (518)
Q Consensus 436 ~~Is~e~i~~Mr~~l~~v~~ 455 (518)
. .++++.+|+++..+..+
T Consensus 337 ~--~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 337 N--GNEQLTNMISTMEQDKI 354 (391)
T ss_pred c--CHHHHHHHHHHHHHhcC
Confidence 3 46888999999866544
No 80
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=30.38 E-value=1.2e+02 Score=33.59 Aligned_cols=94 Identities=11% Similarity=0.200 Sum_probs=48.5
Q ss_pred ccccccccceEEEccC-CCCCCCchHHHHHHhCceeEEecCCCccccceeecCCC-CCeeEEEEe--CC---c-cccccc
Q 046652 358 NVMKMFQNSVFCLQPP-GDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKN-YSSYSLYIP--VR---D-VKDWRV 429 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~-Gds~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfD-w~~fSV~Ip--e~---d-v~~~~~ 429 (518)
+..+.+..+.-++.|. ..+. ...+.|||.+|| |||.+|-. |- +-++--| -+-+-|-.+ +. + +..-.-
T Consensus 385 ~~~~~~~~adv~v~pS~~Egf-gl~~lEAma~G~-PVI~~dv~-~G--~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~ 459 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGF-GLTLMEAVGSGL-GMIGFDVN-YG--NPTFIEDNKNGYLIPIDEEEDDEDQIITALAE 459 (500)
T ss_pred CHHHHHHhCCEEEEcCccccc-cHHHHHHHHhCC-CEEEecCC-CC--CHHHccCCCCEEEEeCCccccchhHHHHHHHH
Confidence 4456666666666654 3343 467999999996 77776631 00 0011112 233433322 11 2 221000
Q ss_pred cHHHHHccCCHHHHHHHHHHHHhhcceeEE
Q 046652 430 NVNETLVGISEDRILALREQVVRLIPSVIY 459 (518)
Q Consensus 430 ~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y 459 (518)
.|..+| .++.+.+|.++..+....|-+
T Consensus 460 ~I~~ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 460 KIVEYF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHHh---ChHHHHHHHHHHHHHHHhcCH
Confidence 133444 356788898888777665544
No 81
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=29.83 E-value=42 Score=30.85 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=30.8
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
..+...+..|..++.|......+..++|||.+|| |||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 3445555569999999887777889999999986 5555654
No 82
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=28.93 E-value=27 Score=38.10 Aligned_cols=89 Identities=8% Similarity=0.049 Sum_probs=52.8
Q ss_pred cccccccccceEEEccCC-CCCCCchHHHHHHhCce---eEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHH
Q 046652 357 VNVMKMFQNSVFCLQPPG-DSYTRKSVFDTILAGCI---PVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVN 432 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~G-ds~~s~Rl~DAi~aGCI---PViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~ 432 (518)
.+..+.++.+.-++.|.- ++. ..-..|||.+||= |||+++...- .+. ..-.+.|+..|+.+-.-.|.
T Consensus 352 ~el~~~y~~aDv~v~pS~~Eg~-~lv~lEAma~g~p~~g~vV~S~~~G~----~~~----~~~g~lv~p~d~~~la~ai~ 422 (460)
T cd03788 352 EELAALYRAADVALVTPLRDGM-NLVAKEYVACQDDDPGVLILSEFAGA----AEE----LSGALLVNPYDIDEVADAIH 422 (460)
T ss_pred HHHHHHHHhccEEEeCcccccc-CcccceeEEEecCCCceEEEeccccc----hhh----cCCCEEECCCCHHHHHHHHH
Confidence 456677888887777653 443 3558899999996 6999875211 111 23356777766654111232
Q ss_pred HHHccCCHHHHHHHHHHHHhhcc
Q 046652 433 ETLVGISEDRILALREQVVRLIP 455 (518)
Q Consensus 433 ~iL~~Is~e~i~~Mr~~l~~v~~ 455 (518)
++|. .++++.++|.++.++...
T Consensus 423 ~~l~-~~~~e~~~~~~~~~~~v~ 444 (460)
T cd03788 423 RALT-MPLEERRERHRKLREYVR 444 (460)
T ss_pred HHHc-CCHHHHHHHHHHHHHHHH
Confidence 3333 366777777666655443
No 83
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=28.71 E-value=29 Score=30.04 Aligned_cols=41 Identities=10% Similarity=0.130 Sum_probs=26.9
Q ss_pred cccccccccceEEEccCC-CCCCCchHHHHHHhCceeEEecCC
Q 046652 357 VNVMKMFQNSVFCLQPPG-DSYTRKSVFDTILAGCIPVFFHPG 398 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~G-ds~~s~Rl~DAi~aGCIPViisd~ 398 (518)
.++.+.++++.+++.|.- +...+..++|++.+||-+| .++.
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi-~~~~ 103 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVI-ASDN 103 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EE-EEHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEE-ECCc
Confidence 468899999999999863 2234578999999998554 4543
No 84
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=27.03 E-value=64 Score=27.72 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=22.1
Q ss_pred cchhhhhHHHHHhhccCc-cccCCCCCceEEEEe
Q 046652 155 TNQFLLEVIFHNKMKNYR-CLTNDSSIASAIYVP 187 (518)
Q Consensus 155 t~~y~lE~ifh~rLl~s~-~rT~DPeeAdlFyVP 187 (518)
.+++-+|.+ -..|.+.. -.|.+|++||++.|=
T Consensus 11 ~N~~Dse~i-~~~l~~~G~~~~~~~e~AD~iiiN 43 (98)
T PF00919_consen 11 MNQYDSERI-ASILQAAGYEIVDDPEEADVIIIN 43 (98)
T ss_pred ccHHHHHHH-HHHHHhcCCeeecccccCCEEEEE
Confidence 456666665 34455554 489999999999664
No 85
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=25.93 E-value=1.6e+02 Score=30.16 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=47.2
Q ss_pred cccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCCC--ccccceeecCCCCCeeEEEEeCCccccccc--cHH
Q 046652 357 VNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGT--AYAQYLWHLPKNYSSYSLYIPVRDVKDWRV--NVN 432 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~~--ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~--~l~ 432 (518)
.++.+.|..+..++...| ..-++|||.+|+--|++.... ...|...---.--....+.++.+++....+ .|.
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~ 319 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL 319 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH
Confidence 356788889999998776 245999999997544443210 000100000011134566677666321110 133
Q ss_pred HHHccCCHHHHHHHHHHHH
Q 046652 433 ETLVGISEDRILALREQVV 451 (518)
Q Consensus 433 ~iL~~Is~e~i~~Mr~~l~ 451 (518)
++|.. ++...+|+++.+
T Consensus 320 ~ll~~--~~~~~~~~~~~~ 336 (357)
T PRK00726 320 ELLSD--PERLEAMAEAAR 336 (357)
T ss_pred HHHcC--HHHHHHHHHHHH
Confidence 33433 667778888753
No 86
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=23.85 E-value=82 Score=33.12 Aligned_cols=35 Identities=11% Similarity=0.339 Sum_probs=27.1
Q ss_pred ccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecC
Q 046652 358 NVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHP 397 (518)
Q Consensus 358 ~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd 397 (518)
+..+.|..|...+.++|- . -+.|||.+|+ |||+.+
T Consensus 275 ~~~~l~~aaDv~V~~~g~--~--ti~EAma~g~-PvI~~~ 309 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP--G--TIAEALIRGL-PIILNG 309 (382)
T ss_pred cHHHHHHhCCEEEECCCc--c--hHHHHHHcCC-CEEEec
Confidence 467888999988887762 2 4899999996 777765
No 87
>PLN03194 putative disease resistance protein; Provisional
Probab=23.21 E-value=7e+02 Score=24.23 Aligned_cols=148 Identities=10% Similarity=0.078 Sum_probs=78.6
Q ss_pred CCceEEEeccCCCCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCC--CcccccccccceEEEccCCCCC----CC-
Q 046652 307 KRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDN--PVNVMKMFQNSVFCLQPPGDSY----TR- 379 (518)
Q Consensus 307 ~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~--~~~y~~~m~~S~FCL~P~Gds~----~s- 379 (518)
+=+.+++|+|.- ....+=..|.+.+... +.-.+++-.. ..... .....+.+..|++|++.-...+ +-
T Consensus 26 ~yDVFISFrG~D---tR~~FvshL~~aL~~~-GI~vF~D~~e--l~~G~~i~~~L~~AIeeSri~IvVfS~~Ya~S~WCL 99 (187)
T PLN03194 26 PCDVFINHRGID---TKRTIATLLYDHLSRL-NLRPFLDNKN--MKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCL 99 (187)
T ss_pred CCcEEEeCCCcc---ccccHHHHHHHHHHHC-CCEEEEcCcc--ccCCCcHHHHHHHHHHhCeEEEEEECCCcccchhHH
Confidence 346788899852 1223445566666655 3322332110 01001 1245567788888887533322 21
Q ss_pred chHHHHHHhC--ceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHHhhccee
Q 046652 380 KSVFDTILAG--CIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSV 457 (518)
Q Consensus 380 ~Rl~DAi~aG--CIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f 457 (518)
.-|..++.++ -|||+.. |+..||... .=..-+.+++.+-|++|.++...-
T Consensus 100 dEL~~I~e~~~~ViPIFY~----------------------VdPsdVr~q------~~~~~~~e~v~~Wr~AL~~va~l~ 151 (187)
T PLN03194 100 HELALIMESKKRVIPIFCD----------------------VKPSQLRVV------DNGTCPDEEIRRFNWALEEAKYTV 151 (187)
T ss_pred HHHHHHHHcCCEEEEEEec----------------------CCHHHhhcc------ccCCCCHHHHHHHHHHHHHHhccc
Confidence 2233333333 3565532 222333320 001235789999999999988776
Q ss_pred EEeCCCCCcCCcccHHHHHHHHHHHHHHHHHH
Q 046652 458 IYADPRSKLETLEDAFDLAVKGILERIEQVRS 489 (518)
Q Consensus 458 ~Y~~p~~~~~~~~DAfd~il~~l~~R~~~~r~ 489 (518)
-|......+ ...+-++.|.+.+.+++-.+-+
T Consensus 152 G~~~~~~~~-~e~e~i~~iv~~v~k~l~~~~~ 182 (187)
T PLN03194 152 GLTFDSLKG-NWSEVVTMASDAVIKNLIELEE 182 (187)
T ss_pred cccCCCCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence 665433211 2257788999999988877643
No 88
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=22.27 E-value=97 Score=33.97 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=51.6
Q ss_pred CcccccccccceEEEccC-CCCCCCchHHHHHHhCcee----EEecCCCccccceeecCCCCCeeEEEEeCCcccccccc
Q 046652 356 PVNVMKMFQNSVFCLQPP-GDSYTRKSVFDTILAGCIP----VFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVN 430 (518)
Q Consensus 356 ~~~y~~~m~~S~FCL~P~-Gds~~s~Rl~DAi~aGCIP----Viisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~ 430 (518)
..+....++.+.-|+.|. .++. ..-..|||.+|+ | ||+++..--. -++. -++.|+..|...-.-.
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~-~Lv~lEamA~g~-P~~g~vVlS~~~G~~---~~l~-----~gllVnP~d~~~lA~a 415 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGM-NLVAKEYVAAQD-PKDGVLILSEFAGAA---QELN-----GALLVNPYDIDGMADA 415 (456)
T ss_pred HHHHHHHHHhCcEEEECcccccc-CccHHHHHHhcC-CCCceEEEeCCCCCh---HHhC-----CcEEECCCCHHHHHHH
Confidence 356677888888888865 4454 356999999996 8 8998742110 1221 3677777776651112
Q ss_pred HHHHHccCCHHHHHHHHHHHHh
Q 046652 431 VNETLVGISEDRILALREQVVR 452 (518)
Q Consensus 431 l~~iL~~Is~e~i~~Mr~~l~~ 452 (518)
|.++|. .|+++..++.+++++
T Consensus 416 I~~aL~-~~~~er~~r~~~~~~ 436 (456)
T TIGR02400 416 IARALT-MPLEEREERHRAMMD 436 (456)
T ss_pred HHHHHc-CCHHHHHHHHHHHHH
Confidence 333333 466665555555544
No 89
>PHA00350 putative assembly protein
Probab=22.13 E-value=2.7e+02 Score=30.22 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=19.1
Q ss_pred Ccccccccchh--hHHHHHHHHHHHHHhhccccc
Q 046652 2 AGINCWSQQLG--FAILISFVLCFVLLCFDYSAL 33 (518)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 33 (518)
+|=|+|.|..| ++.++.+++||.-+..-+..+
T Consensus 217 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (399)
T PHA00350 217 EAKALDINPKWKSLVALLLGILSFGYYFYALSGK 250 (399)
T ss_pred ccccchhchHHHHHHHHHHHHhhhhhhhhecccC
Confidence 56788888888 555555555555444333333
No 90
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=20.71 E-value=72 Score=33.93 Aligned_cols=108 Identities=14% Similarity=0.093 Sum_probs=54.5
Q ss_pred cccccccccceEEEccCCC-CCCCchHHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCccccccccHHHHH
Q 046652 357 VNVMKMFQNSVFCLQPPGD-SYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETL 435 (518)
Q Consensus 357 ~~y~~~m~~S~FCL~P~Gd-s~~s~Rl~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL 435 (518)
++..+.++.+..+++++.. ...-.-+.|||.+|| |||.++...-.....+. ..-..+.+. ..|..+-.-.|..+|
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~~~~e~~~~-~~~~g~~~~--~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTFNFKEIFER-LLQAGAAIQ--VEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCccCHHHHHHH-HHHCCCeEE--ECCHHHHHHHHHHHh
Confidence 3567778888877665321 011234999999995 88887642000000000 011233333 333332000233333
Q ss_pred ccCCHHHHHHHHHHHHhhcceeEEeCCCCCcCCcccHHHHHHHHHHH
Q 046652 436 VGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILE 482 (518)
Q Consensus 436 ~~Is~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAfd~il~~l~~ 482 (518)
. .++...+|.++.++..... .+|.+.+++.+..
T Consensus 387 ~--~~~~~~~m~~~a~~~~~~~------------~~~~~~~~~~l~~ 419 (425)
T PRK05749 387 T--DPDARQAYGEAGVAFLKQN------------QGALQRTLQLLEP 419 (425)
T ss_pred c--CHHHHHHHHHHHHHHHHhC------------ccHHHHHHHHHHH
Confidence 3 4677788888776554321 2566666666553
No 91
>PLN02275 transferase, transferring glycosyl groups
Probab=20.29 E-value=2.2e+02 Score=29.78 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=46.1
Q ss_pred ceEEEeccCCCCCCChhHHHHHHHHHhhCC-CcEEEeecCCCCCcCCCCcccccccccceEEEccC----CCCCCCchHH
Q 046652 309 QYLFSFAGAPRPDLKGSIRGKIIDQCLASG-SLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPP----GDSYTRKSVF 383 (518)
Q Consensus 309 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~-~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~----Gds~~s~Rl~ 383 (518)
.+-+.+.|. |..|+.|.+..++.. +.+.++. ......++.+.|+.+..++.|. |.+. ...++
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~------~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~-p~~ll 327 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRT------MWLEAEDYPLLLGSADLGVSLHTSSSGLDL-PMKVV 327 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEc------CCCCHHHHHHHHHhCCEEEEeccccccccc-cHHHH
Confidence 467888884 345666666655431 1133321 1112456778888888887653 2222 35699
Q ss_pred HHHHhCceeEEecCC
Q 046652 384 DTILAGCIPVFFHPG 398 (518)
Q Consensus 384 DAi~aGCIPViisd~ 398 (518)
|||.+|+ |||.++.
T Consensus 328 EAmA~G~-PVVa~~~ 341 (371)
T PLN02275 328 DMFGCGL-PVCAVSY 341 (371)
T ss_pred HHHHCCC-CEEEecC
Confidence 9999985 8888764
Done!