BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046654
MEIISVPQLSQINPPKTPKWRSNPLQRQRQRQRQRRSLLLLLGMSFSLLTTFCESYIPNP
TTVNSQIQYSKHCNHIVPEPLLDRTNFPASPSSLRFTTAFFAGGDPLFISHQTIWPNSVA
FVPHIDGKTVNSTVFKLEARLSLMISPKDDANIRFRRLRMVKFRGPRIPLRRGSASFWLS
GFWSEADGKLCMVGSGSNRINSGKSNNLNVVLKLNYSRKFNLSVFDSLVSGVLESLDFEG
SESYFKPVSILGVAKLEERSYEFTLIDKGNESDFEDGLDRDKSLSVSDADQGVCSVFGFG
NFKFELAFNSACYSGGNVSCSPVTENVDYLPSALLLRKIRCVEKQKMVMLLGFLNSSIIR
ATFPFDPKTTLIAEGVWDDEKNQLHGVACRILNFTQIITNAYVGDCSVRFNLRFPTVFSV
RNRSTILGQIWSNKSEHDPGYFDKIGFQSSQEVLMGLSGFKYRYTLVDVARKSCAIKNNV
KHKGKTYPDVNSVDMRFSMYVKNSNGQISHGFASPLFVGDHLYQHPLSGHLHLPPLQRYT
VFAFKPNNQHNMQNISYKMSIVPPSGFMFGGSEISEAIEISAEGVYDRDTGVLCMRGCRN
LRPSHQQMKLAKNDSLDCEIDVNFQFRALNEEDSENVKGTIESTRQKSDSLYFGRLELFS
SSIYTSQAKESVWRMDLEITMALILNTVACFFVGLQLFYVKKHPGVLPFISVVMLIILTL
GYMIPLLLNFEALFKANHNQQNLFLGSGGWLEANEIIVRMVTMVAFLLQFRLLQLTWSAR
QGNGSQNETWISERKVLYATLPLYIAGGLSAWVVYRSRNSYHGPYIVHRHIQPLHPRRVR
LNWQHSLWADLKSYGGLILDGFLLPQILFNMFNNSTEKTMAAPFYIGTTVVRLLPHAYDL
YRANTSSWYPDWSYIYANPKMDFYSTAWDIIIPCGGLLFAALIYLQQQNGGRCILPRRFR
EIVAYEKIPVVSNVELQGEPVDKNIYT

High Scoring Gene Products

Symbol, full name Information P value
AT4G21700 protein from Arabidopsis thaliana 1.1e-165
AT1G52780 protein from Arabidopsis thaliana 7.7e-36

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046654
        (987 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119078 - symbol:AT4G21700 "AT4G21700" species...  1612  1.1e-165  1
TAIR|locus:2011566 - symbol:AT1G52780 "AT1G52780" species...   381  7.7e-36   2


>TAIR|locus:2119078 [details] [associations]
            symbol:AT4G21700 "AT4G21700" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] GO:GO:0005794
            GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005768
            GO:GO:0005802 EMBL:AL161555 EMBL:AL035527 InterPro:IPR021319
            Pfam:PF11145 IPI:IPI00548541 PIR:T05845 RefSeq:NP_193901.1
            UniGene:At.54462 PRIDE:Q9SVS7 EnsemblPlants:AT4G21700.1
            GeneID:828257 KEGG:ath:AT4G21700 TAIR:At4g21700 eggNOG:NOG246009
            HOGENOM:HOG000238166 InParanoid:Q9SVS7 OMA:YSTAWDI PhylomeDB:Q9SVS7
            ProtClustDB:CLSN2915923 ArrayExpress:Q9SVS7 Genevestigator:Q9SVS7
            Uniprot:Q9SVS7
        Length = 962

 Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
 Identities = 343/736 (46%), Positives = 468/736 (63%)

Query:   260 SYEFTLIDKGNESDFEDGLDRDKSLSVSDADQGVCSVFGFGNFKFELAFNSACYSGGNVS 319
             +YE+ L++   +S  + G++  +SLS+ +   G+C VF   +  F L + + C  G + S
Sbjct:   250 NYEYKLLE---QSKLDCGVNGGESLSLENVLGGMCKVFEGRSHVFGLMYRNDC--GVDHS 304

Query:   320 CSPVTENVDYLPSALLLRKIRCVEKQKMVMLLGFLNSSIIRATFPFDPKTTLIAEGVWDD 379
             CSP   +V+Y P  + +    C + +KM MLL F N S   + FPFDP+T+L+AEG WD 
Sbjct:   305 CSPFGSDVEYTPGFMSMLSFLC-DGEKMRMLLSFSNMSGYSSLFPFDPRTSLVAEGSWDV 363

Query:   380 EKNQLHGVACRILNFTQIITNAYVGDCSVRFNLRFPTVFSVRNRSTILGQIWSNKSEHDP 439
             E+N+  GVACRILNF+  ++NA V DCS+R +LRFP + S+++ + ++G++WS ++E DP
Sbjct:   364 ERNRFCGVACRILNFSDSLSNAVVDDCSLRLSLRFPAILSIKSMAPVVGELWSAQAESDP 423

Query:   440 GYFDKIGFQSSQEVLMGLSGFKYRYTLVDVARKSC-AIKNNVKHKGKTYPDVNSVDMRFS 498
              YF +I F S  + L      +Y YT  +   K C A K+  K KG  YPD  + DMRF 
Sbjct:   424 SYFRRIEFSSLNDQLWRFPSLRYEYTESERVGKLCGAGKSRPKRKGNHYPDAQTSDMRFV 483

Query:   499 MYVKNSN-GQISH-GFASPLFVGDHLYQXXXXXXXXXXXXQRYTVFAFKPNN-QHNMQNI 555
             M VK S  G +     ASP FVGD LY+               T      N+   +  NI
Sbjct:   484 MSVKYSGEGNVLRTARASPYFVGDRLYRDLLVRGQGVGL----TGIPMNVNSVTKSFTNI 539

Query:   556 SYKMSIVPPSGFMFXXXXXXXXXXXXXXXVYDRDTGVLCMRGCRNLRPSHQQMKLAKNDS 615
             +Y++  + P+                    YDRDTG LCM GC+++R  +      +N++
Sbjct:   540 TYRIRSLNPNS--------ESRGDIYAEGTYDRDTGELCMVGCQSVRLKNTVA--IQNET 589

Query:   616 LDCEIDVNFQFRALNEEDSENVKGTIESTRQKSDSLYFGRLELFSSSIYTSQAKESVWRM 675
             +DC + +   F  ++    + +KGTI+STR+K+D LY GR+E+ S SIY  QAKESVWRM
Sbjct:   590 VDCSLAIKINFSPIDSRSDDRLKGTIKSTREKTDPLYVGRMEVLSRSIYVHQAKESVWRM 649

Query:   676 DLEITMALILNTVACFFVGLQLFYVKKHPGVLPFISVVMLIILTLGYMIPLLLNFEALFK 735
             DLE+ M L+ NT++C F+G+QL+++K+H   LPFISV MLI++TLG+MIPLLLNFE LFK
Sbjct:   650 DLEVAMVLVSNTLSCLFLGMQLYHMKQHQEALPFISVAMLILITLGHMIPLLLNFEELFK 709

Query:   736 ANHNQQNLFLGSGGWLEANEIIVRMVTMVAFLLQFRLLQLTWSARQ-GNGSQNE-TWISE 793
              +HNQ+NLF  +  WLEA EI+VR+VT++AFLL+ RLLQL W+AR+ G+    E  W +E
Sbjct:   710 GSHNQRNLFFENDRWLEAKEIVVRIVTLIAFLLECRLLQLAWTARKTGDHHHREDVWKAE 769

Query:   794 RKVLYATLPLYIAGGLSAWVVYRSRNSYHGPYIVHRHIQPLHPRRVRL--NWQHS-LWAD 850
             +KV Y  LPLYI GGL AW+V R+R      YI     + L  R V L  ++Q   LW D
Sbjct:   770 KKVSYVCLPLYITGGLIAWLVNRNRTPKRIVYIGKPQARNLLYRPVNLKRSFQRPPLWKD 829

Query:   851 LKSYGGLILDGFLLPQILFNMFNNSTEKTMAAPFYIGTTVVRLLPHAYDLYRANTSSWYP 910
             LKSYGGL+LD FLLPQILFN F+NS  K +AA FY+G + VRLLPHAYDLYR+++     
Sbjct:   830 LKSYGGLMLDAFLLPQILFNGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRSHSYGKIL 889

Query:   911 DWSYIYANPKMDFYSTAWDIIIPCGGLLFAALIYLQQQNGGRCILPRRFREIVAYEKIPV 970
             DWS+IYAN KMD+YSTAWDIII C G LFA LI+LQQ+ GGRC +P+RFRE V YEK+  
Sbjct:   890 DWSFIYANHKMDYYSTAWDIIILCIGFLFAFLIFLQQRFGGRCFIPKRFREYVGYEKV-- 947

Query:   971 VSNVELQ--GEPVDKN 984
                VELQ  GE  + N
Sbjct:   948 ---VELQQAGEQHNTN 960

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 189/488 (38%), Positives = 274/488 (56%)

Query:    50 TTFCESYIPNPTT-VNSQIQYSKHCNHIVPEPLLDRTNFPA-SPSSLRFTTAFFAGGDPL 107
             T+   + + NP + +  +I YS HCNHIVPE  +D +     S +SL F  +FF+GGD  
Sbjct:    37 TSLTVASLVNPHSFIAPRIPYSDHCNHIVPESPIDPSPSAVFSHASLAFDVSFFSGGDLF 96

Query:   108 F--ISHQTIWPNSVAFVPHIDGKTV-NSTVFKLEARLSLMISPKDDANIRFRR--LRMVK 162
             F     Q     S  F P    KT+ +  ++K+EA+L+L IS K  A+  +        K
Sbjct:    97 FNRFQSQNGDVKSARFRPKSIRKTLGDGKIYKVEAKLTLQIS-KTSASSSYYGGDFGQKK 155

Query:   163 FRGPRIPLRR--GSASFWLSGFWSEADGKLCMVGSGSN-RINSGKSXXXXXXXXXXYSRK 219
              +  +I  R   G ASF   GFWSE+ G++CMVGS     +   +           YS++
Sbjct:   156 LQVMQIDGRSSWGGASFDFYGFWSESTGQVCMVGSTQVLSVEGTRLKIFDARLMLNYSKE 215

Query:   220 FNLSVFDSLVSGVLESLDFEGSESYFKPVSILGVAKLEERSYEFTLIDKGNESDFEDGLD 279
              N  ++ SLV GVLES+D   S S FK V ILG A+    +YE+ L++   +S  + G++
Sbjct:   216 SN--IYGSLVKGVLESVD---SLSEFKTVLILG-ARNTPLNYEYKLLE---QSKLDCGVN 266

Query:   280 RDKSLSVSDADQGVCSVFGFGNFKFELAFNSACYSGGNVSCSPVTENVDYLPSALLLRKI 339
               +SLS+ +   G+C VF   +  F L + + C  G + SCSP   +V+Y P  + +   
Sbjct:   267 GGESLSLENVLGGMCKVFEGRSHVFGLMYRNDC--GVDHSCSPFGSDVEYTPGFMSMLSF 324

Query:   340 RCVEKQKMVMLLGFLNSSIIRATFPFDPKTTLIAEGVWDDEKNQLHGVACRILNFTQIIT 399
              C + +KM MLL F N S   + FPFDP+T+L+AEG WD E+N+  GVACRILNF+  ++
Sbjct:   325 LC-DGEKMRMLLSFSNMSGYSSLFPFDPRTSLVAEGSWDVERNRFCGVACRILNFSDSLS 383

Query:   400 NAYVGDCSVRFNLRFPTVFSVRNRSTILGQIWSNKSEHDPGYFDKIGFQSSQEVLMGLSG 459
             NA V DCS+R +LRFP + S+++ + ++G++WS ++E DP YF +I F S  + L     
Sbjct:   384 NAVVDDCSLRLSLRFPAILSIKSMAPVVGELWSAQAESDPSYFRRIEFSSLNDQLWRFPS 443

Query:   460 FKYRYTLVDVARKSC-AIKNNVKHKGKTYPDVNSVDMRFSMYVKNSN-GQISH-GFASPL 516
              +Y YT  +   K C A K+  K KG  YPD  + DMRF M VK S  G +     ASP 
Sbjct:   444 LRYEYTESERVGKLCGAGKSRPKRKGNHYPDAQTSDMRFVMSVKYSGEGNVLRTARASPY 503

Query:   517 FVGDHLYQ 524
             FVGD LY+
Sbjct:   504 FVGDRLYR 511


>TAIR|locus:2011566 [details] [associations]
            symbol:AT1G52780 "AT1G52780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
            evidence=IDA] EMBL:CP002684 GO:GO:0005794 GO:GO:0016020
            GO:GO:0005768 GO:GO:0005802 IPI:IPI00545810 RefSeq:NP_175687.2
            UniGene:At.28086 PRIDE:F4IEK8 EnsemblPlants:AT1G52780.1
            GeneID:841711 KEGG:ath:AT1G52780 OMA:YRRQRED InterPro:IPR021319
            Pfam:PF11145 Uniprot:F4IEK8
        Length = 1059

 Score = 381 (139.2 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
 Identities = 111/382 (29%), Positives = 184/382 (48%)

Query:   585 VYDRDTGVLCMRGCRNLRPSHQQMKLAKN--DSLDCEIDVNFQFRALNEE--DSENVKGT 640
             +YD   G + + GCR++R S + +  + +    LDC IDV   +  +          K +
Sbjct:   643 LYDEHVGKMYLVGCRDVRASWKILFESPDLEAGLDCLIDVVVSYPPIKSRWLADPTAKVS 702

Query:   641 IESTRQKSDSLYFGRLELFSSSIYTSQAKESVW-RMDLEITMALILNTVACFFVGLQLFY 699
             I S R + D LYF  ++L ++ I+  + +E +  R  +E  + ++  T +   +   LFY
Sbjct:   703 ISSNRPEDDPLYFKPIKLKTTPIFYRRQREDILSRAGVEGILRVLTLTFSIGCITSLLFY 762

Query:   700 VKKHPGVLPFISVVMLIILTLGYMIPLLLNFEALFK------ANHNQQNLFLGSGGWLEA 753
             V  +   LPF+S+VML +  LGY +PL+   EALFK        +   +  L    W   
Sbjct:   763 VSSNTDSLPFVSLVMLGVQALGYSLPLITGAEALFKRKAASATTYETPSYDLQRSQWFNV 822

Query:   754 NEIIVRMVTMVAFLLQFRLLQLTWSARQG---NGSQNETWI-SERKVLYATLPLYIAGGL 809
              +  V+++ MV FLL  RL Q  W +R        Q    + S+R+VL   L L+  G +
Sbjct:   823 IDYTVKLLVMVCFLLTLRLCQKVWKSRARLLTRTPQEPHKVPSDRRVLLVVLILHALGYI 882

Query:   810 SAWVVYRSRNSYHGPYIVHRHIQPLHPRRVRLNWQHSLW-ADLKSYGGLILDGFLLPQIL 868
              A + + +R          R +   +      NW    W  + + Y GL+ D FLLPQ++
Sbjct:   883 VALIRHPAR--------ADRLVGGSYGSNAS-NW----WQTETEEYIGLVQDFFLLPQVI 929

Query:   869 FN-MFNNSTEKTMAAPFYIGTTVVRLLPHAYDLYRANTSS-WYPDWSYIYANPKMDFYST 926
              N M+   + + +   +Y G T+VRL PHAYD    +    ++    + + NP  DF+S 
Sbjct:   930 ANAMWQIDSRQPLRKLYYFGITLVRLFPHAYDYIVGSVPDPYFIGEEHEFVNPNFDFFSK 989

Query:   927 AWDIIIPCGGLLFAALIYLQQQ 948
               DI IP   +L A ++++QQ+
Sbjct:   990 FGDIAIPVTAILLAVIVFVQQR 1011

 Score = 94 (38.1 bits), Expect = 7.7e-36, Sum P(2) = 7.7e-36
 Identities = 27/85 (31%), Positives = 38/85 (44%)

Query:   370 TLIAEGVWDDEKNQLHGVACRILNFTQIITNAYVGDCSVRFNLRFPTVFSVRNRSTILGQ 429
             T+ AEG+W     QL  V CR            V  C+ R  L  PT FS+R RS ++G 
Sbjct:   418 TVTAEGIWKPSSGQLCMVGCR---------RGQVDGCNARICLYIPTTFSIRQRSILVGT 468

Query:   430 IWSNKSEHD--PGYFDKIGFQSSQE 452
                  +E +  P +F  + F+   E
Sbjct:   469 FSCLNTEKNLTPSFFP-LSFEKLVE 492

 Score = 53 (23.7 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   181 GFWSEADGKLCMVGSGSNRIN 201
             G W  + G+LCMVG    +++
Sbjct:   423 GIWKPSSGQLCMVGCRRGQVD 443

 Score = 42 (19.8 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:   585 VYDRDTGVLCMRGCR 599
             ++   +G LCM GCR
Sbjct:   424 IWKPSSGQLCMVGCR 438

 Score = 37 (18.1 bits), Expect = 7.2e-30, Sum P(2) = 7.2e-30
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query:   178 WLSGFWSEADGKLCMVG 194
             +L G + E  GK+ +VG
Sbjct:   639 YLEGLYDEHVGKMYLVG 655

 Score = 37 (18.1 bits), Expect = 7.2e-30, Sum P(2) = 7.2e-30
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query:   587 DRDTGVLCMRGCRNLRPSHQQ 607
             D D  VLCM G   + PS  +
Sbjct:   189 DDDERVLCMLG-ETMLPSRDE 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      987       932   0.00092  122 3  11 22  0.50    33
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  482 KB (2224 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  77.33u 0.13s 77.46t   Elapsed:  00:00:04
  Total cpu time:  77.33u 0.13s 77.46t   Elapsed:  00:00:04
  Start:  Thu May  9 17:03:29 2013   End:  Thu May  9 17:03:33 2013

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