Query 046654
Match_columns 987
No_of_seqs 132 out of 141
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 04:46:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046654.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046654hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bwqa1 b.7.1.2 (A:729-853) Re 23.0 65 0.0047 27.3 6.2 42 578-629 3-46 (125)
2 d1dqva1 b.7.1.2 (A:295-424) Sy 22.7 49 0.0035 28.5 5.3 66 577-658 6-74 (130)
3 d2gtlo1 b.61.7.1 (O:101-222) E 12.3 2E+02 0.014 25.4 6.7 72 117-219 21-95 (122)
4 d1dqva2 b.7.1.2 (A:425-569) Sy 12.2 85 0.0062 27.2 4.2 67 578-658 9-78 (145)
5 d2cm5a1 b.7.1.2 (A:541-677) C2 9.9 2E+02 0.014 24.1 5.8 63 585-658 9-73 (137)
6 d1rsya_ b.7.1.2 (A:) Synaptoga 7.7 3.8E+02 0.028 22.6 6.9 66 577-658 22-90 (143)
7 d1y0ja1 g.39.1.1 (A:200-238) E 6.1 63 0.0046 23.5 0.4 12 14-25 10-21 (39)
8 d1w15a_ b.7.1.2 (A:) Synaptota 5.3 2.9E+02 0.021 23.2 4.6 18 585-602 9-28 (138)
9 d2gtln1 b.61.7.1 (N:102-229) E 4.9 2.9E+02 0.021 24.4 4.3 56 117-193 23-81 (128)
10 d2gtlm1 b.61.7.1 (M:102-225) H 4.2 4.7E+02 0.034 22.9 5.1 55 117-193 23-80 (124)
No 1
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.97 E-value=65 Score=27.29 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=29.6
Q ss_pred eEEEEeeeecCCCCeEEE--EeccccCccccccccccCCCCCceEEEEEEeecc
Q 046654 578 IEISAEGVYDRDTGVLCM--RGCRNLRPSHQQMKLAKNDSLDCEIDVNFQFRAL 629 (987)
Q Consensus 578 ~~isAEGVYd~~tG~LcM--VGCR~v~~~~~~~~~~~~~~~DC~I~V~vq~pp~ 629 (987)
..|+++ ||+.+++|.. +.||++.. .+.+..|+--|+|.+-|-
T Consensus 3 l~l~l~--y~~~~~~L~V~V~~a~~L~~--------~~~~~~~dpyVkv~l~~~ 46 (125)
T d2bwqa1 3 LSIKLW--FDKVGHQLIVTILGAKDLPS--------REDGRPRNPYVKIYFLPD 46 (125)
T ss_dssp EEEEEE--EETTTTEEEEEEEEEESCCC--------CTTSCCBCEEEEEEEESS
T ss_pred EEEEEE--EECCCCEEEEEEEEeECCCC--------cCCCCCCCEEEEEEEeCC
Confidence 456666 9999999976 89999852 234556666777777553
No 2
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.67 E-value=49 Score=28.46 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=37.6
Q ss_pred ceEEEEeeeecCCCCeE--EEEeccccCccccccccccCCCCCceEEEEEEeeccccCCCceEEEEEEeccCCC-CCCcc
Q 046654 577 AIEISAEGVYDRDTGVL--CMRGCRNLRPSHQQMKLAKNDSLDCEIDVNFQFRALNEEDSENVKGTIESTRQKS-DSLYF 653 (987)
Q Consensus 577 ~~~isAEGVYd~~tG~L--cMVGCR~v~~~~~~~~~~~~~~~DC~I~V~vq~pp~~~~~~~~~~G~I~S~R~~~-DPL~F 653 (987)
...++++ ||+.+|+| .++.|+++... +..+..||- |+|.+-+...+ +-+ |++..++ +|.+=
T Consensus 6 ~l~~sl~--y~~~~~~L~V~V~~a~~L~~~------~~~g~~dpy--v~v~l~~~~~~-----~~k-T~v~~~t~~P~wn 69 (130)
T d1dqva1 6 RISFALR--YLYGSDQLVVRILQALDLPAK------DSNGFSDPY--VKIYLLPDRKK-----KFQ-TKVHRKTLNPIFN 69 (130)
T ss_dssp EEEEEEE--CCSSSCEEEEEEEEEECCCCC------STTSCCCEE--EEEECTTSTTS-----CEE-CCCCCSCSSCEEE
T ss_pred EEEEEEE--EECCCCEEEEEEEeeeCCccc------cCCCCcceE--EEEEEccCCCc-----eEe-ceeEcCCCCeeee
Confidence 4677776 99999999 67889888521 223344554 44445332211 111 3333334 78876
Q ss_pred cceee
Q 046654 654 GRLEL 658 (987)
Q Consensus 654 ~~l~l 658 (987)
+...+
T Consensus 70 e~f~f 74 (130)
T d1dqva1 70 ETFQF 74 (130)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66554
No 3
>d2gtlo1 b.61.7.1 (O:101-222) Extracellular hemoglobin linker l3 subunit {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=12.31 E-value=2e+02 Score=25.40 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=44.9
Q ss_pred Cceeeeee--eeec-ccCCcEEEEEEEEEEeecCCCchhhhhhhccceeccCCCCCCCCceEEEEEeeeeecCCCeeEEe
Q 046654 117 NSVAFVPH--IDGK-TVNSTVFKLEARLSLMISPKDDANIRFRRLRMVKFRGPRIPLRRGSASFWLSGFWSEADGKLCMV 193 (987)
Q Consensus 117 ~~rsfs~~--~v~r-T~~~~v~~v~atL~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lsfvleG~wsessg~LCMV 193 (987)
.|.-+.++ ++-| -.=|+..+|.|+|.++-.+. --.++.++.++|||+-.+-+|=+.
T Consensus 21 ~p~~m~i~Its~~r~~~F~s~~~v~a~v~~~~~~~---------------------g~~~~~s~~~~G~Y~~g~~~L~l~ 79 (122)
T d2gtlo1 21 RPEHMTLAFESSSIAAFFTPIADLHVHIEIESETD---------------------EDESEVSMPADGEYSFADHRLTIH 79 (122)
T ss_dssp CCSEEEEEEEEEEECTTCTTEEEEEEEEEEECCCS---------------------SCCCEEEEEEEEEEETTTTEEEEC
T ss_pred CCCeEEEEEEecccccccCccceEEEEEEEEEecC---------------------CceEEEEeeeeEEEeccceEEEEc
Confidence 44455553 3222 23357899999999996642 134568999999999877776655
Q ss_pred eecCCccccCCccccceEEEEEeccc
Q 046654 194 GSGSNRINSGKSNNLNVVLKLNYSRK 219 (987)
Q Consensus 194 GsgS~~~~~~~v~d~~I~L~LrfP~~ 219 (987)
.- ++.++.|+=.|...
T Consensus 80 pp----------~~dgLg~vC~F~g~ 95 (122)
T d2gtlo1 80 PP----------EEDGLGLVGEFDGY 95 (122)
T ss_dssp CS----------STTTEEEEEEECSS
T ss_pred CC----------CCCcEEEEEEEcCC
Confidence 42 13355555555544
No 4
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=12.22 E-value=85 Score=27.18 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=35.9
Q ss_pred eEEEEeeeecCCCCeEEE--EeccccCccccccccccCCCCCceEEEEEEeeccccCCCceEEEEEEeccCC-CCCCccc
Q 046654 578 IEISAEGVYDRDTGVLCM--RGCRNLRPSHQQMKLAKNDSLDCEIDVNFQFRALNEEDSENVKGTIESTRQK-SDSLYFG 654 (987)
Q Consensus 578 ~~isAEGVYd~~tG~LcM--VGCR~v~~~~~~~~~~~~~~~DC~I~V~vq~pp~~~~~~~~~~G~I~S~R~~-~DPL~F~ 654 (987)
..+++ -|+|.+|+|+. +.|+++.. .+....|+.-|+|++-+...+. ..-| +.+.++ .+|.+=+
T Consensus 9 l~~sl--~Y~~~~~~L~V~V~~a~nL~~--------~~~~~~~dpyv~v~l~~~~~~~-~~~k---T~~~~~t~~P~wne 74 (145)
T d1dqva2 9 LNFSL--CYLPTAGLLTVTIIKASNLKA--------MDLTGFSDPYVKASLISEGRRL-KKRK---TSIKKNTLNPTYNE 74 (145)
T ss_dssp EEEEE--EEETTTTEEEEEEEEEESCCC--------CSSSSCCCEEEEECCCTTCCTT-SCEE---CCCCCSCSSCEEEE
T ss_pred EEEEE--EEcCCCCEEEEEEEEEeCCCC--------cCCCCCcCceEEEEEccCCccc-eeec---CEEEeCCCCceecc
Confidence 34444 59999999987 89998852 1223345555666654433221 1111 222233 3787666
Q ss_pred ceee
Q 046654 655 RLEL 658 (987)
Q Consensus 655 ~l~l 658 (987)
.+.+
T Consensus 75 ~f~F 78 (145)
T d1dqva2 75 ALVF 78 (145)
T ss_dssp CCCC
T ss_pred eEEE
Confidence 5543
No 5
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.90 E-value=2e+02 Score=24.10 Aligned_cols=63 Identities=11% Similarity=0.138 Sum_probs=32.4
Q ss_pred eecCCCCeEEE--EeccccCccccccccccCCCCCceEEEEEEeeccccCCCceEEEEEEeccCCCCCCcccceee
Q 046654 585 VYDRDTGVLCM--RGCRNLRPSHQQMKLAKNDSLDCEIDVNFQFRALNEEDSENVKGTIESTRQKSDSLYFGRLEL 658 (987)
Q Consensus 585 VYd~~tG~LcM--VGCR~v~~~~~~~~~~~~~~~DC~I~V~vq~pp~~~~~~~~~~G~I~S~R~~~DPL~F~~l~l 658 (987)
-|+|.+|+|.. +.|+++.. .+.+..|+.-|+|.+-+.+.+. .+-+=+..++..+|.+=+.+.+
T Consensus 9 ~Y~~~~~~L~V~v~~a~nL~~--------~~~~~~~dpyv~v~l~~~~~~~---~~~kT~v~~~t~~P~wne~f~f 73 (137)
T d2cm5a1 9 MYSTQQGGLIVGIIRCVHLAA--------MDANGYSDPFVKLWLKPDMGKK---AKHKTQIKKKTLNPEFNEEFFY 73 (137)
T ss_dssp EEETTTTEEEEEEEEEESCCC--------CSTTSCCCEEEEEEEETC---C---CEEECCCCCSCSSCEEEEEEEE
T ss_pred EEECCCCEEEEEEEEEECCCC--------CCCCCCcCeEEEEEEEcCCccc---eeecCEeEcCCCCCccceEEEE
Confidence 48899998865 78888742 1223344555555554432211 1112122233347887666654
No 6
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.68 E-value=3.8e+02 Score=22.57 Aligned_cols=66 Identities=11% Similarity=0.156 Sum_probs=36.5
Q ss_pred ceEEEEeeeecCCCCeEEE--EeccccCccccccccccCCCCCceEEEEEEeeccccCCCceEEEEEEec-cCCCCCCcc
Q 046654 577 AIEISAEGVYDRDTGVLCM--RGCRNLRPSHQQMKLAKNDSLDCEIDVNFQFRALNEEDSENVKGTIEST-RQKSDSLYF 653 (987)
Q Consensus 577 ~~~isAEGVYd~~tG~LcM--VGCR~v~~~~~~~~~~~~~~~DC~I~V~vq~pp~~~~~~~~~~G~I~S~-R~~~DPL~F 653 (987)
...++++ ||+.+++|.. +.|+++.. .+.+..|+--|+|++.+...+ ..+ +++ ++..+|.+=
T Consensus 22 ~l~~sl~--y~~~~~~L~V~V~~a~~L~~--------~~~~g~~dpyV~v~l~~~~~~---~~k---T~~~~~t~~P~wn 85 (143)
T d1rsya_ 22 KLQYSLD--YDFQNNQLLVGIIQAAELPA--------LDMGGTSDPYVKVFLLPDKKK---KFE---TKVHRKTLNPVFN 85 (143)
T ss_dssp EEEEEEE--EETTTTEEEEEEEEEESCCC--------CSTTSCCCEEEEEEEETTCCS---CEE---CCCCTTCSSCEEE
T ss_pred EEEEEEE--EeCCCCEEEEEEEEccCCCC--------CCCCCCCCeEEEEEEcCCCCe---eEE---EEEeccccCccee
Confidence 3456665 8999998864 89998842 122233455566666554321 111 333 333478765
Q ss_pred cceee
Q 046654 654 GRLEL 658 (987)
Q Consensus 654 ~~l~l 658 (987)
+.+.+
T Consensus 86 e~f~f 90 (143)
T d1rsya_ 86 EQFTF 90 (143)
T ss_dssp EEEEE
T ss_pred eeeEE
Confidence 55543
No 7
>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.14 E-value=63 Score=23.52 Aligned_cols=12 Identities=33% Similarity=0.742 Sum_probs=9.4
Q ss_pred CCCCCCCCCChh
Q 046654 14 PPKTPKWRSNPL 25 (987)
Q Consensus 14 ~~~~~~~~~~~~ 25 (987)
-..||.||.+|-
T Consensus 10 tt~Tp~WR~gp~ 21 (39)
T d1y0ja1 10 ATATPLWRRDRT 21 (39)
T ss_dssp CCCCSCCEECTT
T ss_pred CCCCcccccCCC
Confidence 457899998884
No 8
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.26 E-value=2.9e+02 Score=23.22 Aligned_cols=18 Identities=28% Similarity=0.422 Sum_probs=14.5
Q ss_pred eecCCCCeEEE--EeccccC
Q 046654 585 VYDRDTGVLCM--RGCRNLR 602 (987)
Q Consensus 585 VYd~~tG~LcM--VGCR~v~ 602 (987)
-|+|.+|+|+. +.|+++.
T Consensus 9 ~Y~~~~~~L~V~v~~a~~L~ 28 (138)
T d1w15a_ 9 CYQSTTNTLTVVVLKARHLP 28 (138)
T ss_dssp EEETTTTEEEEEEEEEESCC
T ss_pred EEcCCCCEEEEEEEEeECCC
Confidence 48999998875 7888874
No 9
>d2gtln1 b.61.7.1 (N:102-229) Extracellular hemoglobin linker l2 subunit {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=4.95 E-value=2.9e+02 Score=24.45 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=35.7
Q ss_pred Cceeeeee--eeecc-cCCcEEEEEEEEEEeecCCCchhhhhhhccceeccCCCCCCCCceEEEEEeeeeecCCCeeEEe
Q 046654 117 NSVAFVPH--IDGKT-VNSTVFKLEARLSLMISPKDDANIRFRRLRMVKFRGPRIPLRRGSASFWLSGFWSEADGKLCMV 193 (987)
Q Consensus 117 ~~rsfs~~--~v~rT-~~~~v~~v~atL~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lsfvleG~wsessg~LCMV 193 (987)
.|.-+.++ ++-|- -=|...+|.|++.+.-.+.+ -.++.++.++|||+-.+-+|=|.
T Consensus 23 ~p~~~~v~Its~~~~~~F~s~~~vka~v~~~~~~~g---------------------~~~~~sl~~~G~Y~fg~~~L~l~ 81 (128)
T d2gtln1 23 EDHVTRITITASKRRKFFTARIWLRALVESELERHG---------------------ENVTSSFNAKGYYNFASRRLILL 81 (128)
T ss_dssp CSEEEEEEEEEEECCTTCTTCEEEEEEEECEEECSS---------------------SEEECCEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEEEeccccccccccccEEEEEEEEEEcCC---------------------ceEEEeeeeEEEEeccceEEEEe
Confidence 45555553 33222 22467899999998876421 23567899999999776666543
No 10
>d2gtlm1 b.61.7.1 (M:102-225) Hemoglobin linker chain l1 {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=4.23 E-value=4.7e+02 Score=22.90 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=34.1
Q ss_pred Cceeeeee--eeecc-cCCcEEEEEEEEEEeecCCCchhhhhhhccceeccCCCCCCCCceEEEEEeeeeecCCCeeEEe
Q 046654 117 NSVAFVPH--IDGKT-VNSTVFKLEARLSLMISPKDDANIRFRRLRMVKFRGPRIPLRRGSASFWLSGFWSEADGKLCMV 193 (987)
Q Consensus 117 ~~rsfs~~--~v~rT-~~~~v~~v~atL~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lsfvleG~wsessg~LCMV 193 (987)
.|.-+.++ ++-|- .=|+..+|.|++.+.-.+ -+.+..+..++|||+-.+-+|=+.
T Consensus 23 ~p~~m~i~Its~~r~~~F~s~~~v~a~v~~~~~~----------------------~~~~~~s~~~~G~Y~fg~~~L~l~ 80 (124)
T d2gtlm1 23 NPDHAIVTITAAHRKSFFPNRVWLRATLSYELDE----------------------HDHTVSTTQLRGFYNFGKRELLLA 80 (124)
T ss_dssp CSEEEEEEEEEECCCTTCTTBCCEEEEEEEESCT----------------------TTCCEEEEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEEEeceeccccCccceEEEEEEEEEcc----------------------CCeEEEeeeeeEEEeccccEEEEc
Confidence 45555553 33222 234678999999986431 123445679999999776666554
Done!