Query 046656
Match_columns 1326
No_of_seqs 763 out of 5566
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:08:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046656.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046656hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-234 2E-239 2147.2 92.1 1229 31-1326 12-1288(1391)
2 PLN03140 ABC transporter G fam 100.0 4E-211 9E-216 2083.0 129.8 1297 18-1326 24-1380(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 5E-172 1E-176 1718.5 125.4 1192 66-1326 3-1269(1394)
4 TIGR00955 3a01204 The Eye Pigm 100.0 7.8E-79 1.7E-83 765.7 58.8 570 133-746 34-612 (617)
5 PLN03211 ABC transporter G-25; 100.0 3.8E-78 8.3E-83 757.5 63.8 608 87-747 36-658 (659)
6 KOG0061 Transporter, ABC super 100.0 5.1E-79 1.1E-83 757.2 54.8 582 87-747 22-608 (613)
7 KOG0061 Transporter, ABC super 100.0 1.7E-79 3.6E-84 761.5 45.5 485 807-1326 23-522 (613)
8 PLN03211 ABC transporter G-25; 100.0 2.8E-78 6E-83 758.7 52.8 491 807-1324 37-569 (659)
9 PLN03140 ABC transporter G fam 100.0 2.5E-76 5.5E-81 789.0 61.9 594 85-749 862-1468(1470)
10 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-76 3.4E-81 744.8 48.7 471 833-1325 36-524 (617)
11 KOG0054 Multidrug resistance-a 100.0 1.3E-74 2.8E-79 740.3 49.3 766 137-1047 534-1357(1381)
12 KOG0055 Multidrug/pheromone ex 100.0 2.7E-74 5.8E-79 719.3 50.0 777 135-1047 364-1208(1228)
13 TIGR01257 rim_protein retinal- 100.0 3E-71 6.5E-76 738.2 67.2 223 809-1058 1937-2161(2272)
14 KOG0065 Pleiotropic drug resis 100.0 3.3E-73 7.1E-78 706.8 35.6 563 133-748 800-1384(1391)
15 TIGR00956 3a01205 Pleiotropic 100.0 5E-70 1.1E-74 732.8 61.7 559 136-746 775-1389(1394)
16 PLN03130 ABC transporter C fam 100.0 7.5E-68 1.6E-72 718.3 54.3 211 809-1048 1237-1457(1622)
17 COG1123 ATPase components of v 100.0 1.4E-66 3E-71 612.3 50.8 474 137-1047 22-514 (539)
18 PLN03232 ABC transporter C fam 100.0 2.4E-67 5.3E-72 714.3 50.6 210 809-1047 1234-1453(1495)
19 TIGR00957 MRP_assoc_pro multi 100.0 3.4E-66 7.3E-71 704.1 53.5 210 809-1047 1284-1503(1522)
20 PRK13549 xylose transporter AT 100.0 5.2E-65 1.1E-69 629.8 50.3 464 134-1050 15-492 (506)
21 PTZ00265 multidrug resistance 100.0 7E-65 1.5E-69 683.1 55.5 216 809-1047 1165-1447(1466)
22 PRK10762 D-ribose transporter 100.0 1.1E-64 2.5E-69 626.0 49.3 454 134-1050 14-482 (501)
23 PRK09700 D-allose transporter 100.0 7.8E-65 1.7E-69 629.3 47.6 461 134-1047 15-493 (510)
24 PTZ00243 ABC transporter; Prov 100.0 5.2E-64 1.1E-68 680.2 59.3 210 809-1047 1308-1528(1560)
25 TIGR01271 CFTR_protein cystic 100.0 6.1E-64 1.3E-68 679.8 57.6 209 809-1047 1217-1435(1490)
26 PRK10261 glutathione transport 100.0 6.4E-64 1.4E-68 631.2 50.7 490 137-1047 29-548 (623)
27 PRK15439 autoinducer 2 ABC tra 100.0 5.7E-64 1.2E-68 620.0 48.3 457 134-1049 21-489 (510)
28 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-63 2.6E-68 617.7 49.7 465 133-1048 10-488 (500)
29 TIGR03269 met_CoM_red_A2 methy 100.0 8.3E-64 1.8E-68 621.6 47.5 449 133-1047 9-512 (520)
30 PRK11288 araG L-arabinose tran 100.0 1.4E-63 3E-68 616.3 48.1 455 135-1051 15-484 (501)
31 PRK15134 microcin C ABC transp 100.0 1.9E-63 4.2E-68 619.1 48.5 466 137-1047 22-510 (529)
32 PRK10982 galactose/methyl gala 100.0 1.6E-62 3.6E-67 605.7 48.2 456 132-1049 6-477 (491)
33 PRK10938 putative molybdenum t 100.0 4.7E-61 1E-65 593.1 41.9 451 133-1044 12-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 6.4E-59 1.4E-63 512.0 44.2 470 135-1047 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.9E-58 4.2E-63 576.0 51.1 201 809-1046 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 1E-58 2.2E-63 576.9 47.3 198 809-1047 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.7E-58 3.6E-63 576.7 47.8 201 809-1046 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.2E-55 4.7E-60 554.0 50.5 197 809-1047 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 3.3E-56 7.1E-61 552.8 40.5 198 809-1048 340-538 (590)
40 PRK11147 ABC transporter ATPas 100.0 4.3E-55 9.4E-60 552.9 50.8 202 809-1047 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 6.6E-55 1.4E-59 510.6 45.3 465 128-1053 12-491 (500)
42 PLN03073 ABC transporter F fam 100.0 8.6E-53 1.9E-57 530.6 46.0 200 809-1047 508-709 (718)
43 COG0488 Uup ATPase components 100.0 1.4E-51 3.1E-56 497.0 42.6 226 130-385 9-239 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.4E-51 5.1E-56 468.8 40.8 466 129-1051 9-491 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 7.2E-45 1.6E-49 374.8 22.9 214 810-1047 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 3.8E-45 8.3E-50 376.9 19.6 229 128-407 6-238 (240)
47 KOG0927 Predicted transporter 100.0 2.6E-42 5.7E-47 394.8 28.0 201 808-1047 388-591 (614)
48 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.9E-42 4E-47 375.2 23.2 218 809-1050 4-225 (254)
49 COG1135 AbcC ABC-type metal io 100.0 1.5E-42 3.4E-47 375.2 21.6 218 810-1047 2-226 (339)
50 COG1131 CcmA ABC-type multidru 100.0 6.9E-42 1.5E-46 390.6 24.6 223 809-1059 4-229 (293)
51 COG1127 Ttg2A ABC-type transpo 100.0 4.9E-42 1.1E-46 359.4 21.2 217 809-1049 8-232 (263)
52 COG1120 FepC ABC-type cobalami 100.0 3.9E-42 8.5E-47 374.9 21.0 229 809-1059 2-236 (258)
53 COG1125 OpuBA ABC-type proline 100.0 2.1E-42 4.6E-47 362.5 18.0 214 810-1048 2-221 (309)
54 COG1125 OpuBA ABC-type proline 100.0 4.7E-42 1E-46 360.0 19.5 217 129-386 6-225 (309)
55 COG1135 AbcC ABC-type metal io 100.0 4.6E-42 1E-46 371.6 19.8 223 136-409 18-246 (339)
56 COG1116 TauB ABC-type nitrate/ 100.0 9.1E-42 2E-46 364.0 21.8 204 809-1038 3-207 (248)
57 COG3839 MalK ABC-type sugar tr 100.0 5.2E-42 1.1E-46 387.9 20.4 226 129-405 8-234 (338)
58 COG3638 ABC-type phosphate/pho 100.0 6.8E-42 1.5E-46 357.4 19.6 230 809-1059 3-244 (258)
59 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-41 2.3E-46 367.5 19.7 228 131-407 9-240 (345)
60 COG3842 PotA ABC-type spermidi 100.0 7.5E-42 1.6E-46 388.7 19.4 230 129-408 10-240 (352)
61 COG4555 NatA ABC-type Na+ tran 100.0 5.1E-42 1.1E-46 347.9 15.9 200 836-1047 16-217 (245)
62 COG1136 SalX ABC-type antimicr 100.0 4.2E-41 9E-46 359.9 23.2 193 835-1039 18-219 (226)
63 COG1127 Ttg2A ABC-type transpo 100.0 9E-41 2E-45 349.9 20.4 217 129-386 13-235 (263)
64 COG1116 TauB ABC-type nitrate/ 100.0 1E-40 2.2E-45 356.0 20.5 200 132-376 11-212 (248)
65 COG1118 CysA ABC-type sulfate/ 100.0 6.1E-41 1.3E-45 361.6 18.9 205 834-1048 14-223 (345)
66 COG3839 MalK ABC-type sugar tr 100.0 9.1E-41 2E-45 377.8 20.8 216 809-1049 3-220 (338)
67 COG1131 CcmA ABC-type multidru 100.0 1.7E-40 3.7E-45 379.2 23.3 219 128-389 8-229 (293)
68 COG2884 FtsE Predicted ATPase 100.0 2.1E-40 4.6E-45 333.7 19.6 214 810-1047 2-221 (223)
69 COG1117 PstB ABC-type phosphat 100.0 2.5E-40 5.4E-45 339.1 19.8 217 809-1047 7-232 (253)
70 COG3842 PotA ABC-type spermidi 100.0 1.3E-40 2.9E-45 378.4 19.2 217 809-1049 5-223 (352)
71 COG1120 FepC ABC-type cobalami 100.0 1.3E-40 2.8E-45 363.1 17.9 215 131-385 9-227 (258)
72 PRK13537 nodulation ABC transp 100.0 3.1E-39 6.7E-44 372.6 26.0 214 809-1047 7-222 (306)
73 COG4555 NatA ABC-type Na+ tran 100.0 7.5E-40 1.6E-44 332.2 16.5 212 131-386 8-222 (245)
74 COG1117 PstB ABC-type phosphat 100.0 1.1E-39 2.4E-44 334.4 17.7 225 133-405 16-248 (253)
75 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.7E-39 8E-44 349.5 20.9 206 138-385 18-226 (254)
76 COG1136 SalX ABC-type antimicr 100.0 6.4E-39 1.4E-43 343.1 21.5 196 137-375 18-220 (226)
77 TIGR02314 ABC_MetN D-methionin 100.0 1.5E-38 3.2E-43 369.5 26.1 217 810-1047 2-225 (343)
78 COG3638 ABC-type phosphate/pho 100.0 4.4E-39 9.6E-44 336.3 19.1 217 135-386 15-237 (258)
79 cd03261 ABC_Org_Solvent_Resist 100.0 2.8E-38 6E-43 353.0 24.5 213 811-1047 2-221 (235)
80 PRK11650 ugpC glycerol-3-phosp 100.0 2.7E-38 5.9E-43 370.4 25.3 215 810-1048 4-220 (356)
81 TIGR03265 PhnT2 putative 2-ami 100.0 3E-38 6.4E-43 369.7 25.4 215 809-1048 4-220 (353)
82 PRK13536 nodulation factor exp 100.0 5E-38 1.1E-42 366.0 26.7 215 808-1047 40-256 (340)
83 PRK11432 fbpC ferric transport 100.0 3.5E-38 7.7E-43 368.4 25.5 215 809-1048 6-222 (351)
84 PRK11650 ugpC glycerol-3-phosp 100.0 2.1E-38 4.5E-43 371.5 23.5 208 135-385 15-223 (356)
85 PRK11432 fbpC ferric transport 100.0 3E-38 6.5E-43 369.0 23.8 209 134-385 16-225 (351)
86 TIGR03265 PhnT2 putative 2-ami 100.0 3E-38 6.5E-43 369.7 23.7 209 134-385 14-223 (353)
87 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-38 6.6E-43 370.0 23.7 212 132-385 13-227 (362)
88 TIGR03258 PhnT 2-aminoethylpho 100.0 5.4E-38 1.2E-42 367.8 25.5 215 809-1048 5-224 (362)
89 TIGR01257 rim_protein retinal- 100.0 7.3E-36 1.6E-40 400.1 48.2 216 808-1047 927-1144(2272)
90 COG1122 CbiO ABC-type cobalt t 100.0 2.8E-38 6.1E-43 345.6 20.6 214 810-1047 4-223 (235)
91 COG1137 YhbG ABC-type (unclass 100.0 8.2E-39 1.8E-43 324.2 14.9 206 833-1048 15-224 (243)
92 cd03259 ABC_Carb_Solutes_like 100.0 8.2E-38 1.8E-42 343.9 23.8 210 811-1045 2-213 (213)
93 COG1124 DppF ABC-type dipeptid 100.0 4E-38 8.8E-43 332.2 20.2 217 809-1048 3-227 (252)
94 COG4152 ABC-type uncharacteriz 100.0 4.2E-38 9.2E-43 328.0 19.6 241 809-1079 2-246 (300)
95 TIGR01188 drrA daunorubicin re 100.0 7.6E-38 1.6E-42 361.5 23.8 202 834-1047 5-208 (302)
96 PRK10851 sulfate/thiosulfate t 100.0 1.1E-37 2.5E-42 364.8 25.3 216 810-1047 3-221 (353)
97 COG1122 CbiO ABC-type cobalt t 100.0 4.4E-38 9.5E-43 344.2 20.0 207 137-386 17-228 (235)
98 COG3840 ThiQ ABC-type thiamine 100.0 3.1E-38 6.8E-43 314.9 17.0 196 840-1047 17-214 (231)
99 PRK09452 potA putrescine/sperm 100.0 8.6E-38 1.9E-42 367.3 23.9 219 136-405 26-245 (375)
100 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.9E-37 4.1E-42 342.7 25.2 200 835-1047 17-218 (220)
101 TIGR02314 ABC_MetN D-methionin 100.0 1.1E-37 2.3E-42 362.3 24.3 206 137-385 18-229 (343)
102 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-37 2.5E-42 343.5 23.3 207 810-1038 2-214 (216)
103 PRK09452 potA putrescine/sperm 100.0 1.9E-37 4.1E-42 364.5 26.0 214 809-1047 14-229 (375)
104 COG2274 SunT ABC-type bacterio 100.0 1.2E-36 2.6E-41 379.0 34.7 213 807-1047 469-691 (709)
105 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-37 3.5E-42 343.2 23.7 212 811-1047 2-216 (220)
106 TIGR01288 nodI ATP-binding ABC 100.0 2.1E-37 4.5E-42 358.1 25.6 214 809-1047 4-219 (303)
107 PRK13537 nodulation ABC transp 100.0 1.3E-37 2.8E-42 359.2 23.4 211 132-386 15-227 (306)
108 PRK11607 potG putrescine trans 100.0 3.5E-37 7.5E-42 363.0 27.3 214 809-1047 19-234 (377)
109 cd03269 ABC_putative_ATPase Th 100.0 2.1E-37 4.5E-42 340.0 23.6 209 811-1045 2-210 (210)
110 cd03301 ABC_MalK_N The N-termi 100.0 2.5E-37 5.5E-42 340.1 24.3 210 811-1045 2-213 (213)
111 TIGR01186 proV glycine betaine 100.0 2E-37 4.4E-42 361.7 24.8 209 134-385 3-218 (363)
112 COG2884 FtsE Predicted ATPase 100.0 1.1E-37 2.3E-42 314.2 19.2 200 137-380 15-220 (223)
113 TIGR01186 proV glycine betaine 100.0 2.8E-37 6E-42 360.6 25.1 204 833-1048 4-215 (363)
114 PRK11153 metN DL-methionine tr 100.0 3.1E-37 6.6E-42 361.3 25.6 217 810-1047 2-225 (343)
115 cd03219 ABC_Mj1267_LivG_branch 100.0 3.6E-37 7.7E-42 344.5 24.9 215 811-1047 2-227 (236)
116 PRK11000 maltose/maltodextrin 100.0 3.2E-37 6.9E-42 364.0 25.6 214 809-1047 3-218 (369)
117 COG3840 ThiQ ABC-type thiamine 100.0 9E-38 2E-42 311.6 17.3 201 142-385 17-218 (231)
118 cd03266 ABC_NatA_sodium_export 100.0 2.9E-37 6.3E-42 340.9 23.1 215 810-1045 2-218 (218)
119 cd03296 ABC_CysA_sulfate_impor 100.0 5.6E-37 1.2E-41 343.2 25.4 217 809-1047 2-221 (239)
120 PRK09536 btuD corrinoid ABC tr 100.0 3.1E-37 6.7E-42 364.4 24.4 218 809-1048 3-224 (402)
121 PRK10851 sulfate/thiosulfate t 100.0 2.7E-37 5.9E-42 361.6 23.6 213 134-385 12-225 (353)
122 TIGR03522 GldA_ABC_ATP gliding 100.0 4.5E-37 9.7E-42 354.7 25.1 213 809-1047 2-216 (301)
123 cd03218 ABC_YhbG The ABC trans 100.0 4.9E-37 1.1E-41 342.5 24.3 212 811-1047 2-217 (232)
124 PRK11607 potG putrescine trans 100.0 3.3E-37 7.1E-42 363.2 24.0 208 135-385 30-238 (377)
125 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.4E-37 9.5E-42 339.5 22.8 207 811-1038 2-216 (218)
126 KOG0058 Peptide exporter, ABC 100.0 5.9E-38 1.3E-42 374.0 16.9 213 808-1047 464-686 (716)
127 cd03268 ABC_BcrA_bacitracin_re 100.0 4.1E-37 8.9E-42 337.1 22.3 206 811-1045 2-208 (208)
128 cd03260 ABC_PstB_phosphate_tra 100.0 4.6E-37 1E-41 341.4 22.7 213 811-1047 2-224 (227)
129 cd03258 ABC_MetN_methionine_tr 100.0 7.3E-37 1.6E-41 341.2 24.0 217 810-1047 2-225 (233)
130 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9E-37 2E-41 346.9 24.6 203 833-1047 35-245 (269)
131 TIGR02673 FtsE cell division A 100.0 7.6E-37 1.6E-41 336.6 23.3 206 810-1038 2-213 (214)
132 COG1124 DppF ABC-type dipeptid 100.0 3.1E-37 6.8E-42 325.5 19.1 205 138-386 21-231 (252)
133 cd03256 ABC_PhnC_transporter A 100.0 6.2E-37 1.3E-41 343.7 22.9 204 835-1047 14-229 (241)
134 COG0411 LivG ABC-type branched 100.0 2.1E-37 4.6E-42 327.2 17.7 226 129-385 9-238 (250)
135 PRK09493 glnQ glutamine ABC tr 100.0 1.2E-36 2.7E-41 340.8 25.0 214 810-1047 2-220 (240)
136 cd03261 ABC_Org_Solvent_Resist 100.0 7.5E-37 1.6E-41 341.5 23.1 209 134-384 10-224 (235)
137 cd03234 ABCG_White The White s 100.0 1.4E-36 3.1E-41 337.0 25.1 221 810-1045 4-226 (226)
138 cd03226 ABC_cobalt_CbiO_domain 100.0 4.3E-37 9.4E-42 336.0 20.7 192 835-1042 13-205 (205)
139 PRK13637 cbiO cobalt transport 100.0 1.1E-36 2.5E-41 348.9 24.6 218 810-1047 3-229 (287)
140 PRK11264 putative amino-acid A 100.0 1.7E-36 3.6E-41 342.0 25.4 214 810-1047 4-228 (250)
141 PRK11000 maltose/maltodextrin 100.0 9.1E-37 2E-41 360.1 24.0 209 134-385 13-222 (369)
142 TIGR01188 drrA daunorubicin re 100.0 8.6E-37 1.9E-41 352.7 23.3 208 135-386 4-213 (302)
143 cd03263 ABC_subfamily_A The AB 100.0 1.1E-36 2.4E-41 336.8 23.1 213 811-1047 2-216 (220)
144 PRK11248 tauB taurine transpor 100.0 1.9E-36 4.2E-41 341.2 25.5 212 810-1047 2-215 (255)
145 PRK11629 lolD lipoprotein tran 100.0 2.5E-36 5.3E-41 336.7 25.9 217 809-1047 5-229 (233)
146 TIGR02315 ABC_phnC phosphonate 100.0 6.5E-37 1.4E-41 343.9 21.4 218 810-1048 2-231 (243)
147 cd03292 ABC_FtsE_transporter F 100.0 1.2E-36 2.6E-41 335.0 23.1 193 835-1038 14-212 (214)
148 PRK13536 nodulation factor exp 100.0 1.1E-36 2.4E-41 354.8 23.7 214 129-386 46-261 (340)
149 PRK13647 cbiO cobalt transport 100.0 1.6E-36 3.5E-41 345.6 24.2 215 809-1047 4-222 (274)
150 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.6E-36 3.5E-41 340.2 23.8 201 835-1047 14-220 (242)
151 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-36 2.8E-41 336.7 22.7 210 811-1047 2-216 (222)
152 PRK11831 putative ABC transpor 100.0 2.5E-36 5.5E-41 343.4 25.5 215 809-1047 7-228 (269)
153 COG1137 YhbG ABC-type (unclass 100.0 1.5E-37 3.3E-42 315.0 13.6 215 129-385 9-227 (243)
154 COG0410 LivF ABC-type branched 100.0 8.1E-37 1.7E-41 320.4 19.4 213 810-1048 4-222 (237)
155 COG0410 LivF ABC-type branched 100.0 9.3E-37 2E-41 319.9 19.7 212 130-385 9-225 (237)
156 PRK13634 cbiO cobalt transport 100.0 1.9E-36 4.2E-41 347.6 23.5 218 810-1047 3-230 (290)
157 cd03264 ABC_drug_resistance_li 100.0 2E-36 4.4E-41 332.4 22.5 208 811-1045 2-211 (211)
158 PRK13651 cobalt transporter AT 100.0 2.3E-36 5E-41 347.9 23.9 218 810-1047 3-249 (305)
159 PRK10908 cell division protein 100.0 3.3E-36 7.2E-41 333.3 24.2 208 810-1041 2-215 (222)
160 cd03235 ABC_Metallic_Cations A 100.0 1.3E-36 2.9E-41 334.3 20.9 199 835-1045 12-213 (213)
161 PRK13631 cbiO cobalt transport 100.0 3.6E-36 7.8E-41 348.3 24.8 218 809-1047 21-260 (320)
162 COG0411 LivG ABC-type branched 100.0 8.9E-37 1.9E-41 322.5 17.9 207 833-1048 15-235 (250)
163 cd03262 ABC_HisP_GlnQ_permease 100.0 2.7E-36 5.8E-41 332.0 22.5 205 811-1038 2-211 (213)
164 PRK13636 cbiO cobalt transport 100.0 3.6E-36 7.9E-41 344.3 24.4 215 809-1047 5-226 (283)
165 PRK10895 lipopolysaccharide AB 100.0 3.8E-36 8.3E-41 337.1 24.2 214 810-1047 4-221 (241)
166 PRK10619 histidine/lysine/argi 100.0 5.6E-36 1.2E-40 338.8 25.5 215 809-1047 5-236 (257)
167 COG4559 ABC-type hemin transpo 100.0 1.6E-36 3.4E-41 310.4 18.7 208 136-385 13-229 (259)
168 TIGR00972 3a0107s01c2 phosphat 100.0 5.2E-36 1.1E-40 337.1 24.9 214 810-1047 2-227 (247)
169 COG4559 ABC-type hemin transpo 100.0 1.2E-36 2.7E-41 311.1 17.8 227 810-1059 2-238 (259)
170 cd03257 ABC_NikE_OppD_transpor 100.0 4E-36 8.7E-41 334.3 23.7 217 810-1045 2-228 (228)
171 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-36 4.7E-41 332.2 21.3 193 835-1038 14-210 (211)
172 PRK13643 cbiO cobalt transport 100.0 3.9E-36 8.4E-41 344.7 24.1 217 810-1047 2-228 (288)
173 PRK11247 ssuB aliphatic sulfon 100.0 4E-36 8.6E-41 338.1 23.4 206 809-1047 12-218 (257)
174 PRK13650 cbiO cobalt transport 100.0 3.4E-36 7.4E-41 343.8 23.3 216 809-1047 4-224 (279)
175 cd03259 ABC_Carb_Solutes_like 100.0 3E-36 6.5E-41 331.5 21.9 203 134-379 10-213 (213)
176 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.4E-36 1.6E-40 333.5 25.2 212 810-1047 2-216 (236)
177 PRK15079 oligopeptide ABC tran 100.0 9.2E-36 2E-40 346.1 26.9 229 809-1047 8-246 (331)
178 PRK13646 cbiO cobalt transport 100.0 4.2E-36 9.2E-41 344.3 23.8 218 809-1047 2-230 (286)
179 cd03265 ABC_DrrA DrrA is the A 100.0 3.7E-36 8E-41 332.4 22.4 209 133-384 9-219 (220)
180 TIGR02211 LolD_lipo_ex lipopro 100.0 6.3E-36 1.4E-40 331.0 24.1 211 810-1042 2-220 (221)
181 PRK13641 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 343.7 24.2 219 809-1047 2-229 (287)
182 TIGR03740 galliderm_ABC gallid 100.0 7.9E-36 1.7E-40 330.5 24.7 197 835-1048 13-209 (223)
183 PRK11153 metN DL-methionine tr 100.0 4.5E-36 9.7E-41 351.5 23.9 207 136-385 17-229 (343)
184 TIGR01288 nodI ATP-binding ABC 100.0 4.4E-36 9.5E-41 347.0 23.5 209 134-386 14-224 (303)
185 PRK13644 cbiO cobalt transport 100.0 5.6E-36 1.2E-40 341.1 23.4 213 810-1047 2-219 (274)
186 COG4988 CydD ABC-type transpor 100.0 1.7E-35 3.7E-40 347.4 27.9 214 807-1049 318-540 (559)
187 PRK11614 livF leucine/isoleuci 100.0 5.8E-36 1.3E-40 334.8 23.0 212 809-1047 5-221 (237)
188 KOG0058 Peptide exporter, ABC 100.0 1.4E-36 3E-41 362.3 19.0 211 134-386 478-691 (716)
189 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.6E-36 1.6E-40 339.3 24.3 214 129-385 29-249 (269)
190 PRK11300 livG leucine/isoleuci 100.0 7.8E-36 1.7E-40 337.6 24.2 217 809-1047 5-238 (255)
191 PRK10070 glycine betaine trans 100.0 8.9E-36 1.9E-40 351.8 25.4 203 833-1047 39-249 (400)
192 PRK11124 artP arginine transpo 100.0 9E-36 1.9E-40 334.3 24.2 213 810-1047 3-225 (242)
193 COG4175 ProV ABC-type proline/ 100.0 2.5E-36 5.4E-41 325.6 18.6 224 134-408 38-268 (386)
194 TIGR03005 ectoine_ehuA ectoine 100.0 1E-35 2.3E-40 335.7 24.7 213 811-1047 2-231 (252)
195 PRK13637 cbiO cobalt transport 100.0 8.8E-36 1.9E-40 341.6 24.2 218 137-397 20-248 (287)
196 TIGR01978 sufC FeS assembly AT 100.0 1.3E-35 2.9E-40 333.4 25.2 218 811-1047 2-229 (243)
197 PRK13652 cbiO cobalt transport 100.0 1E-35 2.2E-40 339.8 24.5 214 810-1047 4-222 (277)
198 KOG0055 Multidrug/pheromone ex 100.0 1E-34 2.2E-39 364.7 35.7 215 807-1048 348-572 (1228)
199 PRK14268 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 335.4 25.5 214 809-1047 12-237 (258)
200 cd03296 ABC_CysA_sulfate_impor 100.0 7.6E-36 1.7E-40 334.1 22.9 211 135-384 13-224 (239)
201 PRK13548 hmuV hemin importer A 100.0 9.8E-36 2.1E-40 336.5 24.0 213 810-1047 3-225 (258)
202 cd03219 ABC_Mj1267_LivG_branch 100.0 8E-36 1.7E-40 333.6 23.0 217 134-384 10-230 (236)
203 COG4525 TauB ABC-type taurine 100.0 5.4E-36 1.2E-40 301.7 19.1 200 835-1047 18-219 (259)
204 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-35 2.9E-40 333.0 24.6 215 810-1047 3-226 (242)
205 cd03218 ABC_YhbG The ABC trans 100.0 8.7E-36 1.9E-40 332.4 22.8 209 132-384 8-220 (232)
206 PRK14247 phosphate ABC transpo 100.0 1.7E-35 3.6E-40 333.7 25.2 217 809-1047 3-229 (250)
207 PRK14267 phosphate ABC transpo 100.0 1.6E-35 3.4E-40 334.6 24.9 217 809-1047 4-232 (253)
208 TIGR03522 GldA_ABC_ATP gliding 100.0 7.4E-36 1.6E-40 344.5 22.6 210 132-386 10-221 (301)
209 PRK13635 cbiO cobalt transport 100.0 9.7E-36 2.1E-40 339.8 23.3 215 809-1047 5-224 (279)
210 PRK14273 phosphate ABC transpo 100.0 1.8E-35 3.9E-40 334.2 25.2 215 809-1047 7-233 (254)
211 PRK13638 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 338.6 23.7 213 810-1047 2-220 (271)
212 cd03260 ABC_PstB_phosphate_tra 100.0 6.1E-36 1.3E-40 332.4 20.8 207 134-383 10-226 (227)
213 cd03301 ABC_MalK_N The N-termi 100.0 1E-35 2.2E-40 327.4 22.3 202 135-379 11-213 (213)
214 cd03258 ABC_MetN_methionine_tr 100.0 1.1E-35 2.4E-40 331.7 22.9 204 138-384 19-228 (233)
215 PRK11231 fecE iron-dicitrate t 100.0 1.1E-35 2.5E-40 335.9 23.3 217 810-1048 3-223 (255)
216 COG2274 SunT ABC-type bacterio 100.0 3.7E-36 8E-41 374.7 20.9 207 138-386 487-696 (709)
217 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.2E-35 2.5E-40 326.3 22.4 194 840-1045 16-211 (211)
218 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.5E-35 3.2E-40 327.6 22.9 201 137-382 17-219 (220)
219 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-35 2.9E-40 330.4 22.6 211 811-1049 2-218 (230)
220 PRK09984 phosphonate/organopho 100.0 1.6E-35 3.5E-40 336.0 23.7 220 809-1048 4-238 (262)
221 PRK10575 iron-hydroxamate tran 100.0 1.5E-35 3.4E-40 336.4 23.6 217 809-1047 11-232 (265)
222 TIGR02769 nickel_nikE nickel i 100.0 2.6E-35 5.7E-40 334.5 25.3 223 810-1047 3-235 (265)
223 PRK13639 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 336.1 25.0 214 810-1047 2-221 (275)
224 PRK10584 putative ABC transpor 100.0 3.4E-35 7.3E-40 326.7 25.2 213 809-1043 6-226 (228)
225 PRK14241 phosphate transporter 100.0 2.9E-35 6.4E-40 333.1 25.2 217 809-1047 4-237 (258)
226 TIGR03415 ABC_choXWV_ATP choli 100.0 2.1E-35 4.6E-40 346.0 24.6 204 833-1048 35-250 (382)
227 cd03269 ABC_putative_ATPase Th 100.0 1.2E-35 2.6E-40 326.0 21.1 200 135-379 11-210 (210)
228 PRK13649 cbiO cobalt transport 100.0 2.4E-35 5.1E-40 337.9 24.4 217 810-1047 3-229 (280)
229 COG4181 Predicted ABC-type tra 100.0 1.1E-35 2.4E-40 293.4 18.5 212 809-1042 6-225 (228)
230 cd03263 ABC_subfamily_A The AB 100.0 1.3E-35 2.8E-40 328.3 21.3 203 137-384 15-219 (220)
231 PRK14242 phosphate transporter 100.0 3.7E-35 8.1E-40 331.5 25.5 216 808-1047 5-232 (253)
232 PRK10253 iron-enterobactin tra 100.0 1.8E-35 4E-40 335.8 23.1 217 809-1047 7-228 (265)
233 PRK13634 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 340.0 22.6 218 137-397 20-249 (290)
234 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-35 4.2E-40 334.2 23.1 216 810-1047 2-221 (256)
235 cd03224 ABC_TM1139_LivF_branch 100.0 1.6E-35 3.6E-40 327.9 22.0 207 133-385 9-220 (222)
236 PRK13643 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 337.9 24.3 223 138-404 20-254 (288)
237 PRK10070 glycine betaine trans 100.0 2.3E-35 5E-40 348.2 24.3 210 133-385 37-253 (400)
238 PRK10744 pstB phosphate transp 100.0 3.5E-35 7.6E-40 332.8 24.9 217 807-1047 11-239 (260)
239 PRK11022 dppD dipeptide transp 100.0 5.6E-35 1.2E-39 339.6 26.9 220 810-1047 4-238 (326)
240 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-35 2.4E-40 327.7 20.0 195 137-375 16-216 (216)
241 cd03256 ABC_PhnC_transporter A 100.0 2.4E-35 5.3E-40 330.8 22.9 213 137-384 14-232 (241)
242 PRK14245 phosphate ABC transpo 100.0 4.9E-35 1.1E-39 329.8 25.5 215 809-1047 3-229 (250)
243 TIGR01184 ntrCD nitrate transp 100.0 2.3E-35 5E-40 327.8 22.5 198 838-1047 1-199 (230)
244 cd03300 ABC_PotA_N PotA is an 100.0 4.5E-35 9.8E-40 326.2 24.8 212 811-1047 2-215 (232)
245 PRK11308 dppF dipeptide transp 100.0 5.7E-35 1.2E-39 339.3 26.5 225 809-1047 5-239 (327)
246 PRK09536 btuD corrinoid ABC tr 100.0 1.7E-35 3.8E-40 349.5 22.4 213 133-385 12-227 (402)
247 COG4525 TauB ABC-type taurine 100.0 2.5E-35 5.3E-40 297.0 20.1 206 137-387 18-225 (259)
248 PRK13632 cbiO cobalt transport 100.0 3.5E-35 7.6E-40 334.5 24.1 215 809-1047 7-226 (271)
249 TIGR03415 ABC_choXWV_ATP choli 100.0 2.8E-35 6E-40 345.0 23.9 211 132-385 32-253 (382)
250 PRK13549 xylose transporter AT 100.0 2.9E-35 6.2E-40 364.6 25.4 222 809-1050 5-230 (506)
251 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.8E-35 6.1E-40 330.2 23.0 206 137-385 14-224 (242)
252 COG4175 ProV ABC-type proline/ 100.0 1.1E-35 2.3E-40 320.7 18.7 203 835-1049 41-251 (386)
253 KOG0057 Mitochondrial Fe/S clu 100.0 8.4E-36 1.8E-40 343.4 19.0 210 808-1047 350-569 (591)
254 cd03232 ABC_PDR_domain2 The pl 100.0 3.4E-35 7.3E-40 317.2 22.4 190 809-1045 3-192 (192)
255 PRK13633 cobalt transporter AT 100.0 3.3E-35 7.2E-40 336.1 23.5 219 809-1047 4-228 (280)
256 KOG0062 ATPase component of AB 100.0 3.4E-35 7.4E-40 334.9 23.3 204 807-1047 360-564 (582)
257 TIGR01277 thiQ thiamine ABC tr 100.0 4.3E-35 9.3E-40 322.1 23.4 198 837-1046 13-212 (213)
258 PRK09473 oppD oligopeptide tra 100.0 6.4E-35 1.4E-39 339.3 26.1 224 809-1047 12-246 (330)
259 PRK13647 cbiO cobalt transport 100.0 4E-35 8.6E-40 334.1 23.9 204 137-384 18-225 (274)
260 cd03233 ABC_PDR_domain1 The pl 100.0 5.4E-35 1.2E-39 318.1 23.7 196 809-1045 3-202 (202)
261 PRK14235 phosphate transporter 100.0 5.9E-35 1.3E-39 331.8 25.1 216 809-1047 19-246 (267)
262 cd03267 ABC_NatA_like Similar 100.0 5.1E-35 1.1E-39 326.4 24.1 201 833-1045 32-236 (236)
263 PRK13547 hmuV hemin importer A 100.0 3.3E-35 7.2E-40 333.4 22.9 219 810-1048 2-240 (272)
264 PRK13651 cobalt transporter AT 100.0 2.7E-35 5.8E-40 339.1 22.3 205 137-385 20-253 (305)
265 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-35 4.6E-40 323.5 20.5 198 134-379 10-208 (208)
266 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.9E-34 1.3E-38 365.8 37.2 208 809-1047 451-668 (686)
267 TIGR00968 3a0106s01 sulfate AB 100.0 5.9E-35 1.3E-39 326.3 24.3 201 835-1047 13-215 (237)
268 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2E-35 4.2E-40 326.3 20.2 195 137-375 17-218 (218)
269 PRK11831 putative ABC transpor 100.0 3.9E-35 8.5E-40 333.7 23.3 208 136-385 19-232 (269)
270 cd03226 ABC_cobalt_CbiO_domain 100.0 1.9E-35 4.2E-40 323.0 19.9 192 137-376 13-205 (205)
271 PRK13648 cbiO cobalt transport 100.0 6.2E-35 1.4E-39 332.2 24.5 215 809-1047 7-226 (269)
272 PRK14269 phosphate ABC transpo 100.0 6.2E-35 1.3E-39 328.1 24.2 215 810-1047 3-225 (246)
273 PRK13645 cbiO cobalt transport 100.0 4.7E-35 1E-39 336.6 23.6 219 809-1047 6-235 (289)
274 PRK14250 phosphate ABC transpo 100.0 4.2E-35 9.1E-40 328.3 22.6 209 809-1047 3-216 (241)
275 TIGR03608 L_ocin_972_ABC putat 100.0 3.9E-35 8.5E-40 321.0 21.8 189 835-1035 11-206 (206)
276 cd03266 ABC_NatA_sodium_export 100.0 3E-35 6.5E-40 324.8 20.7 198 138-379 19-218 (218)
277 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6E-35 1.3E-39 326.3 23.4 207 135-385 12-220 (236)
278 TIGR02315 ABC_phnC phosphonate 100.0 3.1E-35 6.8E-40 330.3 21.1 214 136-384 14-233 (243)
279 PRK13640 cbiO cobalt transport 100.0 5.9E-35 1.3E-39 334.2 23.6 217 809-1047 5-227 (282)
280 COG0444 DppD ABC-type dipeptid 100.0 1.1E-34 2.4E-39 320.2 24.8 224 810-1048 2-239 (316)
281 PRK14256 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 327.3 25.5 216 809-1047 4-231 (252)
282 cd03299 ABC_ModC_like Archeal 100.0 9E-35 1.9E-39 324.4 24.4 199 837-1047 14-214 (235)
283 PRK14259 phosphate ABC transpo 100.0 6.9E-35 1.5E-39 331.5 23.9 214 809-1047 13-248 (269)
284 PRK13631 cbiO cobalt transport 100.0 6.1E-35 1.3E-39 338.0 23.8 216 137-397 39-279 (320)
285 PRK15093 antimicrobial peptide 100.0 1.1E-34 2.4E-39 338.3 26.1 223 809-1047 3-243 (330)
286 PRK13650 cbiO cobalt transport 100.0 6.3E-35 1.4E-39 333.4 23.5 216 137-396 20-242 (279)
287 PRK09493 glnQ glutamine ABC tr 100.0 5.4E-35 1.2E-39 327.5 22.6 207 135-385 12-224 (240)
288 PRK14237 phosphate transporter 100.0 1.3E-34 2.8E-39 329.1 25.9 222 806-1047 17-246 (267)
289 cd03297 ABC_ModC_molybdenum_tr 100.0 7.4E-35 1.6E-39 320.6 23.2 191 840-1045 16-214 (214)
290 PRK11264 putative amino-acid A 100.0 6.6E-35 1.4E-39 329.0 23.3 206 136-385 15-232 (250)
291 PRK10771 thiQ thiamine transpo 100.0 6.5E-35 1.4E-39 325.1 22.8 211 810-1047 2-214 (232)
292 PRK15079 oligopeptide ABC tran 100.0 9.3E-35 2E-39 337.7 24.5 209 136-385 33-250 (331)
293 cd03264 ABC_drug_resistance_li 100.0 4.1E-35 8.9E-40 322.0 20.3 199 135-379 11-211 (211)
294 PRK11144 modC molybdate transp 100.0 7.9E-35 1.7E-39 342.2 24.0 190 840-1047 16-213 (352)
295 PRK15112 antimicrobial peptide 100.0 9.7E-35 2.1E-39 330.1 23.8 224 809-1047 4-234 (267)
296 PRK10762 D-ribose transporter 100.0 8.6E-35 1.9E-39 359.9 25.4 219 810-1050 5-228 (501)
297 PRK11629 lolD lipoprotein tran 100.0 9E-35 1.9E-39 324.2 23.0 201 137-381 22-229 (233)
298 TIGR02142 modC_ABC molybdenum 100.0 8.6E-35 1.9E-39 342.5 24.1 194 840-1047 15-216 (354)
299 KOG0057 Mitochondrial Fe/S clu 100.0 4.7E-35 1E-39 337.2 21.2 207 137-386 365-574 (591)
300 PRK14257 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 335.7 25.5 220 809-1047 80-308 (329)
301 PRK14270 phosphate ABC transpo 100.0 1.5E-34 3.4E-39 326.0 24.9 215 809-1047 4-230 (251)
302 PRK00349 uvrA excinuclease ABC 100.0 1.9E-33 4.2E-38 359.1 37.9 122 910-1047 792-922 (943)
303 PRK00635 excinuclease ABC subu 100.0 3.9E-33 8.4E-38 368.4 41.8 135 906-1048 759-902 (1809)
304 COG0444 DppD ABC-type dipeptid 100.0 1.5E-34 3.3E-39 319.1 24.0 232 136-410 17-259 (316)
305 PRK14240 phosphate transporter 100.0 1.7E-34 3.8E-39 325.5 25.1 215 809-1047 3-229 (250)
306 PRK10895 lipopolysaccharide AB 100.0 7.8E-35 1.7E-39 326.5 22.1 209 134-385 13-225 (241)
307 PRK14239 phosphate transporter 100.0 1.6E-34 3.5E-39 326.3 24.8 215 809-1047 5-231 (252)
308 PRK14244 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 326.2 24.4 219 810-1047 6-232 (251)
309 PRK14274 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 327.4 24.6 215 809-1047 12-238 (259)
310 PRK14260 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 326.8 24.8 216 809-1047 7-238 (259)
311 cd03213 ABCG_EPDR ABCG transpo 100.0 1.3E-34 2.9E-39 313.0 22.7 190 809-1045 3-194 (194)
312 PRK11144 modC molybdate transp 100.0 7.7E-35 1.7E-39 342.3 22.4 195 142-385 16-217 (352)
313 PRK13642 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 330.6 23.7 216 809-1047 4-224 (277)
314 COG1245 Predicted ATPase, RNas 100.0 1.1E-33 2.4E-38 316.9 30.5 199 838-1064 357-559 (591)
315 TIGR02770 nickel_nikD nickel i 100.0 1.2E-34 2.6E-39 322.5 22.7 201 837-1047 1-210 (230)
316 PRK11248 tauB taurine transpor 100.0 1.2E-34 2.7E-39 326.6 22.7 203 135-382 12-216 (255)
317 PRK11701 phnK phosphonate C-P 100.0 2.4E-34 5.1E-39 325.7 24.9 215 809-1047 6-236 (258)
318 PRK09700 D-allose transporter 100.0 1.2E-34 2.6E-39 359.7 24.4 219 809-1049 5-231 (510)
319 PRK14262 phosphate ABC transpo 100.0 2.7E-34 5.9E-39 323.9 25.1 214 810-1047 4-229 (250)
320 cd03233 ABC_PDR_domain1 The pl 100.0 1.8E-34 3.9E-39 314.0 22.7 180 135-379 18-202 (202)
321 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.6E-33 3.4E-38 363.6 35.5 209 809-1047 477-695 (710)
322 PRK13635 cbiO cobalt transport 100.0 1.5E-34 3.4E-39 329.9 23.1 216 137-396 20-242 (279)
323 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-34 2.5E-39 322.9 21.5 205 134-384 10-219 (230)
324 PRK10418 nikD nickel transport 100.0 2.5E-34 5.3E-39 324.7 24.5 214 808-1047 3-225 (254)
325 PRK14272 phosphate ABC transpo 100.0 3.5E-34 7.5E-39 323.6 25.6 216 809-1047 4-231 (252)
326 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.4E-34 5.2E-39 318.2 23.7 192 833-1045 33-224 (224)
327 PRK09473 oppD oligopeptide tra 100.0 2.3E-34 4.9E-39 334.7 24.5 213 137-385 29-250 (330)
328 cd03292 ABC_FtsE_transporter F 100.0 1E-34 2.3E-39 319.6 20.6 195 137-375 14-214 (214)
329 TIGR02673 FtsE cell division A 100.0 1.2E-34 2.5E-39 319.2 20.9 194 137-374 15-214 (214)
330 PRK13543 cytochrome c biogenes 100.0 2.1E-34 4.5E-39 316.7 22.8 201 809-1036 11-211 (214)
331 PRK11614 livF leucine/isoleuci 100.0 1.2E-34 2.7E-39 324.0 21.4 204 136-385 17-225 (237)
332 COG4988 CydD ABC-type transpor 100.0 1.3E-34 2.9E-39 339.9 22.6 205 138-385 335-542 (559)
333 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-34 4.1E-39 324.5 23.0 209 135-385 12-231 (247)
334 PRK11174 cysteine/glutathione 100.0 4.8E-35 1E-39 370.2 20.3 209 809-1047 349-567 (588)
335 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-34 2.4E-39 326.3 21.0 195 137-382 25-219 (257)
336 PRK13636 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 330.8 22.6 206 137-385 19-230 (283)
337 PRK14253 phosphate ABC transpo 100.0 3.2E-34 6.8E-39 323.2 24.7 215 809-1047 3-228 (249)
338 COG4604 CeuD ABC-type enteroch 100.0 1.5E-35 3.3E-40 299.3 12.5 230 810-1062 2-236 (252)
339 PRK13646 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 331.2 22.6 206 137-385 20-234 (286)
340 PRK14258 phosphate ABC transpo 100.0 3.7E-34 8E-39 324.4 25.3 221 809-1047 7-240 (261)
341 TIGR01193 bacteriocin_ABC ABC- 100.0 1.8E-33 3.9E-38 362.6 34.9 210 809-1047 473-692 (708)
342 PRK13641 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 331.6 22.2 205 137-385 20-233 (287)
343 PRK14236 phosphate transporter 100.0 4.7E-34 1E-38 325.3 25.9 215 809-1047 25-251 (272)
344 TIGR03005 ectoine_ehuA ectoine 100.0 1.9E-34 4.2E-39 325.4 22.2 208 135-385 11-235 (252)
345 cd03267 ABC_NatA_like Similar 100.0 3.4E-34 7.3E-39 319.8 23.8 205 132-379 29-236 (236)
346 TIGR03411 urea_trans_UrtD urea 100.0 2.6E-34 5.6E-39 322.6 23.0 213 135-384 13-229 (242)
347 TIGR02982 heterocyst_DevA ABC 100.0 2.9E-34 6.3E-39 317.2 23.0 211 810-1041 2-219 (220)
348 PRK15056 manganese/iron transp 100.0 2E-34 4.4E-39 328.4 22.4 218 809-1048 6-226 (272)
349 PRK11022 dppD dipeptide transp 100.0 2.8E-34 6E-39 333.8 23.9 213 137-385 20-242 (326)
350 TIGR02142 modC_ABC molybdenum 100.0 2.3E-34 4.9E-39 338.9 23.5 206 133-385 8-220 (354)
351 PRK14275 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 326.8 25.8 215 809-1047 39-265 (286)
352 PRK13548 hmuV hemin importer A 100.0 2.4E-34 5.3E-39 325.1 22.8 209 134-385 12-229 (258)
353 cd03257 ABC_NikE_OppD_transpor 100.0 2.4E-34 5.1E-39 320.1 22.3 201 138-379 19-228 (228)
354 PRK13644 cbiO cobalt transport 100.0 2.2E-34 4.7E-39 328.1 22.4 204 137-385 15-223 (274)
355 PRK14248 phosphate ABC transpo 100.0 3.8E-34 8.2E-39 325.8 24.3 215 809-1047 21-247 (268)
356 PRK13538 cytochrome c biogenes 100.0 2.2E-34 4.7E-39 314.3 21.1 199 810-1035 2-202 (204)
357 PRK10619 histidine/lysine/argi 100.0 2.7E-34 5.8E-39 325.1 22.6 208 135-385 16-240 (257)
358 TIGR03375 type_I_sec_LssB type 100.0 5E-33 1.1E-37 357.7 37.4 211 809-1047 463-683 (694)
359 TIGR02633 xylG D-xylose ABC tr 100.0 3.8E-34 8.2E-39 354.6 26.0 221 810-1050 2-228 (500)
360 PRK14273 phosphate ABC transpo 100.0 2.3E-34 5E-39 325.2 22.0 207 137-385 20-237 (254)
361 PRK14261 phosphate ABC transpo 100.0 5E-34 1.1E-38 322.3 24.7 215 809-1047 6-232 (253)
362 TIGR03740 galliderm_ABC gallid 100.0 2.6E-34 5.7E-39 318.3 22.0 200 134-382 10-209 (223)
363 PRK10908 cell division protein 100.0 2.4E-34 5.1E-39 318.5 21.6 197 136-376 14-216 (222)
364 PRK14268 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 324.6 23.0 210 136-384 24-240 (258)
365 PRK10419 nikE nickel transport 100.0 4.5E-34 9.9E-39 324.6 24.4 224 810-1048 4-237 (268)
366 PRK13638 cbiO cobalt transport 100.0 3.6E-34 7.8E-39 326.4 23.6 207 135-385 12-224 (271)
367 PRK14242 phosphate transporter 100.0 4E-34 8.7E-39 323.1 23.8 211 137-385 19-236 (253)
368 PRK14251 phosphate ABC transpo 100.0 5.5E-34 1.2E-38 321.6 24.8 215 809-1047 4-230 (251)
369 PRK14247 phosphate ABC transpo 100.0 3.4E-34 7.3E-39 323.1 23.1 214 136-385 15-233 (250)
370 PRK11308 dppF dipeptide transp 100.0 4.6E-34 1E-38 331.7 24.8 207 137-385 28-243 (327)
371 PRK14249 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 321.4 24.9 215 809-1047 4-230 (251)
372 COG1132 MdlB ABC-type multidru 100.0 6E-35 1.3E-39 367.3 18.8 211 808-1047 327-547 (567)
373 cd03231 ABC_CcmA_heme_exporter 100.0 2E-34 4.4E-39 313.7 20.4 184 835-1035 13-198 (201)
374 PRK11300 livG leucine/isoleuci 100.0 3.2E-34 6.8E-39 324.5 22.6 223 135-385 16-242 (255)
375 PRK10247 putative ABC transpor 100.0 2.8E-34 6E-39 318.2 21.6 210 809-1046 7-221 (225)
376 cd03234 ABCG_White The White s 100.0 3.5E-34 7.6E-39 317.9 22.3 203 136-379 19-226 (226)
377 PRK14271 phosphate ABC transpo 100.0 6.4E-34 1.4E-38 324.3 25.0 219 809-1047 21-246 (276)
378 PRK13632 cbiO cobalt transport 100.0 5.7E-34 1.2E-38 324.5 24.6 205 137-385 22-230 (271)
379 cd03225 ABC_cobalt_CbiO_domain 100.0 2.5E-34 5.4E-39 315.8 20.9 194 137-374 14-211 (211)
380 PRK13652 cbiO cobalt transport 100.0 3.4E-34 7.5E-39 327.2 22.8 206 137-385 17-226 (277)
381 PRK15439 autoinducer 2 ABC tra 100.0 3.3E-34 7.1E-39 354.9 24.4 212 809-1049 11-226 (510)
382 PRK14263 phosphate ABC transpo 100.0 7.3E-34 1.6E-38 321.4 25.2 219 808-1047 7-240 (261)
383 TIGR02211 LolD_lipo_ex lipopro 100.0 3E-34 6.4E-39 317.6 21.5 196 137-376 18-220 (221)
384 cd03252 ABCC_Hemolysin The ABC 100.0 1E-34 2.2E-39 324.9 17.4 209 811-1047 2-220 (237)
385 cd03235 ABC_Metallic_Cations A 100.0 2.4E-34 5.1E-39 316.5 20.1 205 132-379 7-213 (213)
386 PRK14255 phosphate ABC transpo 100.0 9.5E-34 2.1E-38 319.9 25.3 215 809-1047 5-231 (252)
387 cd03300 ABC_PotA_N PotA is an 100.0 6E-34 1.3E-38 317.2 23.3 208 135-385 11-219 (232)
388 PRK14254 phosphate ABC transpo 100.0 8E-34 1.7E-38 324.8 24.9 213 809-1047 39-264 (285)
389 COG4152 ABC-type uncharacteriz 100.0 1.6E-34 3.6E-39 301.3 17.3 216 128-388 6-221 (300)
390 PRK11288 araG L-arabinose tran 100.0 4.9E-34 1.1E-38 353.2 24.9 216 809-1046 4-223 (501)
391 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.2E-34 4.8E-39 326.0 20.0 211 809-1048 2-221 (275)
392 PRK13639 cbiO cobalt transport 100.0 7.4E-34 1.6E-38 324.1 24.4 205 137-385 15-225 (275)
393 PRK11124 artP arginine transpo 100.0 3.3E-34 7.2E-39 321.6 21.2 205 136-384 14-228 (242)
394 PRK14257 phosphate ABC transpo 100.0 4.7E-34 1E-38 331.5 23.1 211 137-385 95-312 (329)
395 COG1129 MglA ABC-type sugar tr 100.0 6.2E-34 1.3E-38 334.3 24.1 228 809-1058 8-242 (500)
396 CHL00131 ycf16 sulfate ABC tra 100.0 1.2E-33 2.6E-38 319.1 25.7 220 809-1047 7-236 (252)
397 PRK14250 phosphate ABC transpo 100.0 4.2E-34 9.1E-39 320.2 21.6 202 136-385 15-220 (241)
398 TIGR01846 type_I_sec_HlyB type 100.0 8.3E-33 1.8E-37 355.4 36.7 212 808-1047 454-675 (694)
399 PRK14238 phosphate transporter 100.0 7.3E-34 1.6E-38 323.4 23.8 215 809-1047 24-250 (271)
400 PRK13648 cbiO cobalt transport 100.0 6.8E-34 1.5E-38 323.7 23.5 205 137-385 22-230 (269)
401 PRK13649 cbiO cobalt transport 100.0 8.6E-34 1.9E-38 325.0 24.4 205 137-385 20-233 (280)
402 PRK13633 cobalt transporter AT 100.0 5.5E-34 1.2E-38 326.0 22.7 205 137-385 23-232 (280)
403 PRK14265 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 322.1 25.3 215 808-1047 19-253 (274)
404 PRK14267 phosphate ABC transpo 100.0 6E-34 1.3E-38 321.7 22.5 214 136-385 16-236 (253)
405 cd03298 ABC_ThiQ_thiamine_tran 100.0 5E-34 1.1E-38 313.4 21.2 195 142-379 16-211 (211)
406 TIGR01978 sufC FeS assembly AT 100.0 6.7E-34 1.4E-38 319.6 22.6 217 133-385 9-233 (243)
407 TIGR02769 nickel_nikE nickel i 100.0 7.6E-34 1.6E-38 322.6 23.2 207 136-385 23-239 (265)
408 PRK14245 phosphate ABC transpo 100.0 7E-34 1.5E-38 320.5 22.8 212 135-385 14-233 (250)
409 TIGR02770 nickel_nikD nickel i 100.0 6.8E-34 1.5E-38 316.3 22.4 207 139-385 1-214 (230)
410 TIGR02323 CP_lyasePhnK phospho 100.0 1.2E-33 2.5E-38 319.4 24.6 215 809-1047 3-233 (253)
411 PRK10253 iron-enterobactin tra 100.0 5.6E-34 1.2E-38 323.7 22.0 212 134-385 17-232 (265)
412 PRK10982 galactose/methyl gala 100.0 5.9E-34 1.3E-38 351.8 24.1 207 835-1050 11-221 (491)
413 PRK14256 phosphate ABC transpo 100.0 9E-34 2E-38 320.0 23.5 214 135-385 15-235 (252)
414 TIGR01184 ntrCD nitrate transp 100.0 5.7E-34 1.2E-38 316.7 21.5 202 140-384 1-202 (230)
415 TIGR01166 cbiO cobalt transpor 100.0 4.9E-34 1.1E-38 308.0 20.4 178 835-1022 5-188 (190)
416 PRK14235 phosphate transporter 100.0 6.8E-34 1.5E-38 323.2 22.4 212 137-385 32-250 (267)
417 PRK10575 iron-hydroxamate tran 100.0 5.9E-34 1.3E-38 323.5 21.8 211 136-385 23-236 (265)
418 PRK14239 phosphate transporter 100.0 9.7E-34 2.1E-38 319.9 23.4 212 136-385 17-235 (252)
419 PRK09984 phosphonate/organopho 100.0 5.3E-34 1.1E-38 323.6 21.3 218 135-384 15-240 (262)
420 COG4987 CydC ABC-type transpor 100.0 9.6E-35 2.1E-39 334.7 15.2 212 809-1048 336-557 (573)
421 cd03230 ABC_DR_subfamily_A Thi 100.0 6.1E-34 1.3E-38 302.3 20.2 157 835-1038 13-171 (173)
422 PRK14270 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 319.1 23.5 211 136-385 16-234 (251)
423 PRK14243 phosphate transporter 100.0 1.1E-33 2.4E-38 320.8 23.7 214 809-1047 10-243 (264)
424 PRK11231 fecE iron-dicitrate t 100.0 5.5E-34 1.2E-38 322.1 21.0 212 134-385 12-226 (255)
425 PRK03695 vitamin B12-transport 100.0 9.5E-34 2.1E-38 318.4 22.7 197 837-1047 11-217 (248)
426 cd03299 ABC_ModC_like Archeal 100.0 1.2E-33 2.5E-38 315.4 23.3 204 139-385 14-218 (235)
427 PRK11174 cysteine/glutathione 100.0 4.4E-34 9.5E-39 361.5 22.4 207 137-386 363-572 (588)
428 PRK13640 cbiO cobalt transport 100.0 1E-33 2.2E-38 323.9 23.3 208 137-385 20-231 (282)
429 cd03262 ABC_HisP_GlnQ_permease 100.0 4E-34 8.6E-39 314.8 19.2 198 134-375 10-213 (213)
430 PRK13539 cytochrome c biogenes 100.0 6.5E-34 1.4E-38 311.1 20.7 197 810-1036 3-199 (207)
431 PRK10790 putative multidrug tr 100.0 3.5E-34 7.5E-39 362.4 21.2 209 809-1047 340-558 (592)
432 PRK11176 lipid transporter ATP 100.0 4.1E-34 8.8E-39 361.5 21.7 212 809-1047 341-562 (582)
433 PRK10584 putative ABC transpor 100.0 1.1E-33 2.4E-38 314.5 22.5 197 138-378 24-227 (228)
434 PRK14269 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 317.8 22.8 215 134-385 12-229 (246)
435 PRK14237 phosphate transporter 100.0 1.4E-33 3.1E-38 320.6 23.7 211 137-385 33-250 (267)
436 PRK13546 teichoic acids export 100.0 2.9E-33 6.2E-38 315.9 25.8 194 833-1048 35-228 (264)
437 PRK14241 phosphate transporter 100.0 1.1E-33 2.4E-38 320.3 22.4 214 135-385 15-241 (258)
438 TIGR00968 3a0106s01 sulfate AB 100.0 1.3E-33 2.9E-38 315.3 22.8 208 135-385 11-219 (237)
439 PRK14266 phosphate ABC transpo 100.0 1.8E-33 3.8E-38 317.3 24.0 219 809-1047 3-229 (250)
440 TIGR03873 F420-0_ABC_ATP propo 100.0 9.7E-34 2.1E-38 320.3 21.9 209 135-384 12-224 (256)
441 PRK14246 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 317.5 24.0 216 809-1047 10-236 (257)
442 TIGR00630 uvra excinuclease AB 100.0 1.6E-32 3.5E-37 350.0 35.5 123 909-1047 789-920 (924)
443 PRK14274 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 320.1 22.7 212 136-385 24-242 (259)
444 cd03245 ABCC_bacteriocin_expor 100.0 4.1E-34 8.8E-39 316.3 18.2 209 810-1045 3-220 (220)
445 PRK10771 thiQ thiamine transpo 100.0 1.4E-33 3E-38 314.4 22.5 202 141-385 16-218 (232)
446 PRK09580 sufC cysteine desulfu 100.0 2.3E-33 4.9E-38 316.2 24.4 219 810-1047 2-230 (248)
447 PRK13645 cbiO cobalt transport 100.0 8.8E-34 1.9E-38 326.0 21.4 205 138-385 25-239 (289)
448 PRK15093 antimicrobial peptide 100.0 1.3E-33 2.9E-38 329.3 22.9 218 136-385 19-247 (330)
449 COG4181 Predicted ABC-type tra 100.0 1.1E-33 2.3E-38 279.4 18.5 203 131-377 17-226 (228)
450 cd03229 ABC_Class3 This class 100.0 7.2E-34 1.6E-38 303.2 18.8 159 835-1038 13-177 (178)
451 PRK14240 phosphate transporter 100.0 1.4E-33 3.1E-38 318.0 22.2 212 136-385 15-233 (250)
452 TIGR01189 ccmA heme ABC export 100.0 1.1E-33 2.5E-38 307.2 20.5 183 835-1034 13-197 (198)
453 cd03251 ABCC_MsbA MsbA is an e 100.0 3.5E-34 7.5E-39 319.9 16.8 195 836-1047 16-220 (234)
454 PRK11160 cysteine/glutathione 100.0 5.5E-34 1.2E-38 357.9 20.6 211 809-1047 338-557 (574)
455 PRK10744 pstB phosphate transp 100.0 1.6E-33 3.4E-38 319.3 22.3 210 137-385 26-243 (260)
456 PRK14244 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 317.5 22.5 214 135-385 16-236 (251)
457 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-33 4.1E-38 309.4 22.2 202 130-379 6-214 (214)
458 COG4148 ModC ABC-type molybdat 100.0 2.3E-34 4.9E-39 305.2 14.2 195 142-385 16-217 (352)
459 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-33 4.1E-38 309.1 22.2 199 139-380 13-212 (213)
460 PRK14271 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 320.0 23.4 216 132-385 29-250 (276)
461 PRK14262 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 317.2 22.4 212 136-385 15-233 (250)
462 PRK14252 phosphate ABC transpo 100.0 4.5E-33 9.7E-38 316.5 25.6 214 809-1047 16-244 (265)
463 PRK15112 antimicrobial peptide 100.0 2E-33 4.4E-38 319.3 22.6 207 137-385 26-238 (267)
464 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5E-34 1.1E-38 319.4 17.3 196 835-1047 16-221 (238)
465 TIGR02324 CP_lyasePhnL phospho 100.0 2.6E-33 5.7E-38 310.6 22.7 210 810-1036 2-223 (224)
466 PRK11701 phnK phosphonate C-P 100.0 2.7E-33 5.9E-38 317.1 23.2 208 136-385 18-240 (258)
467 PRK14249 phosphate ABC transpo 100.0 3E-33 6.6E-38 315.5 23.5 212 136-385 16-234 (251)
468 cd03254 ABCC_Glucan_exporter_l 100.0 5.3E-34 1.1E-38 317.4 17.1 211 809-1047 2-221 (229)
469 TIGR00958 3a01208 Conjugate Tr 100.0 5.1E-34 1.1E-38 366.1 19.1 210 809-1047 478-697 (711)
470 COG1132 MdlB ABC-type multidru 100.0 1.7E-33 3.7E-38 354.1 23.3 209 136-386 341-552 (567)
471 PRK09544 znuC high-affinity zi 100.0 2.6E-33 5.7E-38 314.6 22.2 198 809-1047 4-204 (251)
472 TIGR03269 met_CoM_red_A2 methy 100.0 3E-33 6.4E-38 348.1 24.5 214 811-1047 2-253 (520)
473 PRK13545 tagH teichoic acids e 100.0 4.5E-33 9.7E-38 330.4 24.6 191 835-1047 37-227 (549)
474 PRK14259 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 319.7 20.6 210 136-385 25-252 (269)
475 PRK14253 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 315.4 21.9 212 135-384 14-231 (249)
476 KOG0066 eIF2-interacting prote 100.0 3.4E-33 7.5E-38 308.6 21.8 201 807-1047 584-786 (807)
477 PRK10418 nikD nickel transport 100.0 4.7E-33 1E-37 314.3 23.4 210 137-385 16-229 (254)
478 cd03215 ABC_Carb_Monos_II This 100.0 2.5E-33 5.5E-38 300.1 20.2 159 837-1038 15-180 (182)
479 PRK14263 phosphate ABC transpo 100.0 3.2E-33 6.8E-38 316.3 22.0 214 132-385 16-244 (261)
480 PRK14272 phosphate ABC transpo 100.0 4.4E-33 9.5E-38 314.6 23.1 214 135-385 15-235 (252)
481 PRK14248 phosphate ABC transpo 100.0 4.4E-33 9.5E-38 317.1 23.1 208 137-385 34-251 (268)
482 PRK14236 phosphate transporter 100.0 4.4E-33 9.5E-38 317.4 23.1 212 136-385 37-255 (272)
483 PRK14264 phosphate ABC transpo 100.0 6.4E-33 1.4E-37 320.5 24.7 217 809-1047 45-284 (305)
484 PRK13547 hmuV hemin importer A 100.0 3.3E-33 7.1E-38 317.1 21.8 216 134-385 11-243 (272)
485 PRK13540 cytochrome c biogenes 100.0 2.9E-33 6.3E-38 304.4 20.4 194 810-1033 2-197 (200)
486 PRK14251 phosphate ABC transpo 100.0 4.2E-33 9.1E-38 314.4 22.3 212 136-385 16-234 (251)
487 PRK14261 phosphate ABC transpo 100.0 4.7E-33 1E-37 314.3 22.6 212 136-385 18-236 (253)
488 PRK15134 microcin C ABC transp 100.0 6.2E-33 1.3E-37 345.7 25.4 221 809-1047 5-241 (529)
489 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-33 4.3E-38 361.0 21.5 205 137-386 466-673 (686)
490 PRK14258 phosphate ABC transpo 100.0 7.1E-33 1.5E-37 313.9 23.4 213 137-385 20-244 (261)
491 PRK14255 phosphate ABC transpo 100.0 8.4E-33 1.8E-37 312.2 23.9 212 136-385 17-235 (252)
492 PRK13642 cbiO cobalt transport 100.0 7.7E-33 1.7E-37 316.1 23.8 205 137-385 20-228 (277)
493 COG4604 CeuD ABC-type enteroch 100.0 5.7E-34 1.2E-38 287.9 12.5 217 128-385 5-224 (252)
494 PRK14275 phosphate ABC transpo 100.0 5.9E-33 1.3E-37 318.1 22.5 210 135-385 50-269 (286)
495 COG4598 HisP ABC-type histidin 100.0 1.3E-33 2.9E-38 280.3 14.6 204 833-1047 17-236 (256)
496 PRK14238 phosphate transporter 100.0 7.9E-33 1.7E-37 315.0 23.3 215 133-385 33-254 (271)
497 cd03253 ABCC_ATM1_transporter 100.0 1.7E-33 3.7E-38 314.8 17.5 196 835-1047 14-219 (236)
498 COG3845 ABC-type uncharacteriz 100.0 1.2E-32 2.7E-37 315.6 24.7 253 809-1094 4-262 (501)
499 TIGR03771 anch_rpt_ABC anchore 100.0 5.8E-33 1.2E-37 307.1 21.4 194 843-1048 1-197 (223)
500 COG4618 ArpD ABC-type protease 100.0 4E-33 8.8E-38 317.9 20.5 212 136-388 348-562 (580)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-234 Score=2147.23 Aligned_cols=1229 Identities=53% Similarity=0.905 Sum_probs=1146.3
Q ss_pred cchHHhhhHHHHhhCCC------------------CChHHhHHHHHHhhhcccccHHHHHHHHHHHhhhcCCCCCcceEE
Q 046656 31 DDEKEALKWAAHEKLPS------------------LGLQERQRLIDKLVKVTDVDNEKFMLKLRYRFDRVGIELPKVEVR 92 (1326)
Q Consensus 31 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~v~ 92 (1326)
+||||+++|||+||||| +++.+++.++++..+..++||++++.++++|++++ ++|.++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p~~~~~ 89 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDRSLLRSIFESEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELPTIEVR 89 (1391)
T ss_pred chhHHHHHHHHHhcCccccchhhhhhccCcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCCceEEE
Confidence 34999999999999999 66778999999999999999999999999999998 89999999
Q ss_pred EeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhc
Q 046656 93 YEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAG 172 (1326)
Q Consensus 93 ~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G 172 (1326)
++++.+++++..+ ||+.|...+.++.+....+.. ++.+.+||+|+||.++||+|++++|||||||||||++|+|
T Consensus 90 ~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g 163 (1391)
T KOG0065|consen 90 FSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAG 163 (1391)
T ss_pred eeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhC
Confidence 9999999998765 999999988888776554433 4456789999999999999999999999999999999999
Q ss_pred ccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchh
Q 046656 173 QLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLF 252 (1326)
Q Consensus 173 ~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~ 252 (1326)
.++...+..|+|+|||++.+++.+++.++|++|+|+|+|+|||||+|+|+++|++++.|++ +..|+|+.+
T Consensus 164 ~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~------- 233 (1391)
T KOG0065|consen 164 KLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA------- 233 (1391)
T ss_pred CCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-------
Confidence 9988777789999999999999999999999999999999999999999999999999987 566666542
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHH
Q 046656 253 IDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTF 332 (1326)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~ 332 (1326)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||++|+.
T Consensus 234 ----------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLDSsTal 297 (1391)
T KOG0065|consen 234 ----------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLDSSTAF 297 (1391)
T ss_pred ----------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccccHHHHH
Confidence 2689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCcc
Q 046656 333 HIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRK 412 (1326)
Q Consensus 333 ~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~ 412 (1326)
++++.||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++++++++
T Consensus 298 ~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~vts~k 377 (1391)
T KOG0065|consen 298 QIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTEVTSKK 377 (1391)
T ss_pred HHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcCh
Q 046656 413 DQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNS 492 (1326)
Q Consensus 413 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~ 492 (1326)
++.++|..+..|+.+.+++|+.+.|.+++.++++..+++.+.++.+.++.++..+.|.++.|+|++.|..|++++++||.
T Consensus 378 ~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l~k~n~ 457 (1391)
T KOG0065|consen 378 DQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLLMKRNY 457 (1391)
T ss_pred cccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHH
Q 046656 493 FVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAY 572 (1326)
Q Consensus 493 ~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay 572 (1326)
++++++.++.+++|+++|++|+++.+ ++..++..+.|++||++++.++++++++.++++++|||+|||+..||++|++
T Consensus 458 ~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY~p~A~ 535 (1391)
T KOG0065|consen 458 FYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFYPPWAE 535 (1391)
T ss_pred eEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccccChHHH
Confidence 99999999999999999999999985 4556678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Q 046656 573 ALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFA 652 (1326)
Q Consensus 573 ~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l 652 (1326)
.++.+++++|++++++++|.+|+||++||.+++++||.+++++++.+++++++|++++++++++.+|+++|++.++++.+
T Consensus 536 al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~L~i~m 615 (1391)
T KOG0065|consen 536 ALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILLLVLFM 615 (1391)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCccccccCC---------------CcchhhHHhhccCcc--
Q 046656 653 FGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSWRKFTTNS---------------TESLGVQVLKSRGFF-- 715 (1326)
Q Consensus 653 ~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~---------------~~~~g~~~L~~~~~~-- 715 (1326)
++||+++..+||+||+|++|+||+.|+++++++|||++++|.|.+.++ ..+.|.+++..+++.
T Consensus 616 ~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~~~l~~ 695 (1391)
T KOG0065|consen 616 YGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGRDYLKV 695 (1391)
T ss_pred HcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEeccccccc
Confidence 999999999999999999999999999999999999999999973221 356788999988887
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccccccCCcccccccCCCCCCCCCCCccc
Q 046656 716 ---PHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRIGGTIQLSTYGSNSSHSKNSGVVR 792 (1326)
Q Consensus 716 ---~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1326)
...+|+|+++|+++||+++|+++++++++|+++..+.+.....+...++........ .........
T Consensus 696 ~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 764 (1391)
T KOG0065|consen 696 QYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGS-----------SSEIEKLDD 764 (1391)
T ss_pred ccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccc-----------ccccccccc
Confidence 677899999999999999999999999999999988887766543322211000000 000000001
Q ss_pred cCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCC
Q 046656 793 ATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK 872 (1326)
Q Consensus 793 ~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~ 872 (1326)
....+++++..|+.+..++++||.|.+++|.+++.+| +++++|+|||+.++||.++||||+||||||||||+|+||+
T Consensus 765 s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~ 841 (1391)
T KOG0065|consen 765 SSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRK 841 (1391)
T ss_pred ccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCc
Confidence 1111355778888889999999999999998888776 5678999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccc
Q 046656 873 TGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQS 952 (1326)
Q Consensus 873 ~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~ 952 (1326)
++|.++|+|+|||+|+++..|+|.+|||.|+|.|.+.+||||.|.|+|+||++.+++.+++.++||++++.+||++++|.
T Consensus 842 t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~da 921 (1391)
T KOG0065|consen 842 TGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADA 921 (1391)
T ss_pred ccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhh
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhce
Q 046656 953 LVGLPGESGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDE 1031 (1326)
Q Consensus 953 ~vg~~~~~~LSgGqrqrl~ia~aL~~~p-~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1031 (1326)
+||.|| +|||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++++.||+
T Consensus 922 iVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~ 1000 (1391)
T KOG0065|consen 922 LVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDE 1000 (1391)
T ss_pred hccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhH
Confidence 999999 899999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcEEEEEcCCCCChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCccceEEEeccchhhhhccCCHHHHhhc
Q 046656 1032 LFLMKRGGQEIYVGPLGSNSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNPATWMLEVTSTTKELALGIDFTNIYKH 1111 (1326)
Q Consensus 1032 v~~l~~gg~~~~~G~~~~~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~ 1111 (1326)
+++|++||++||+||+|++++++++||+ +++|++ |++..|||||||||++++.+...+.||++.|++
T Consensus 1001 LLLLkrGGqtVY~G~lG~~s~~li~YFe------------s~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~ 1067 (1391)
T KOG0065|consen 1001 LLLLKRGGQTVYFGPLGENSSKLIEYFE------------SIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKN 1067 (1391)
T ss_pred HHHHhcCCeEEEecCcccccHHHHHHHH------------hcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhc
Confidence 9999999999999999999999999999 777875 666669999999999999988888999999999
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCCCCCCcccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046656 1112 SDLYRRNKALIEELSKPAPD-SQDIYFPTWYSRSFFMQFLACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGT 1190 (1326)
Q Consensus 1112 s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~~~~r~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~ 1190 (1326)
|+++++++++++++++++++ +.+.+++++|++|++.|++.|+||++++|||+|+|+++|++++++.||++|++||+.|+
T Consensus 1068 S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~ 1147 (1391)
T KOG0065|consen 1068 SEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH 1147 (1391)
T ss_pred cHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC
Confidence 99999999999999999998 78888999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCHHhHHHHHHHHHHHHHHHHHhhhhhcccchHHhHHHHHhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 046656 1191 KTKQNQDLFNAMGSMYTAVFFIGAQLCSSVQPVVAVERTVYYREKGAGMYSGMSYAFAQVMIEIPYVLVLSVVYGVIVYA 1270 (1326)
Q Consensus 1191 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~ 1270 (1326)
++||++|.+|++|+++++.+..++..++|.+..||.++||||++|||||.+|++||+++|+||+++++.+|++|+|+
T Consensus 1148 ---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~ 1224 (1391)
T KOG0065|consen 1148 ---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYY 1224 (1391)
T ss_pred ---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeee
Confidence 68999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred cccccccHHHHH--------HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCC
Q 046656 1271 MIGFEWTAAKFF--------CLLYFTFYGMMTVAMTPNHNIAAIVSILFFGLWNVFSGFVIPRP 1326 (1326)
Q Consensus 1271 ~~g~~~~~~~f~--------~~~~~~~~g~~~~~~~p~~~~a~~~~~~~~~~~~lf~G~~i~~~ 1326 (1326)
|+||++++.+|+ +++|++++|||+++++||.++|+++++++++++++||||++|++
T Consensus 1225 ~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~ 1288 (1391)
T KOG0065|consen 1225 PIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRS 1288 (1391)
T ss_pred eccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccc
Confidence 999999998765 34677889999999999999999999999999999999999985
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.1e-211 Score=2082.97 Aligned_cols=1297 Identities=61% Similarity=1.040 Sum_probs=1152.0
Q ss_pred CCCCCCCC----CCCCccchHHhhhHHHHhhCCC--------C-----------------------ChHHhHHHHHHhhh
Q 046656 18 EGAFPRSP----REEEEDDEKEALKWAAHEKLPS--------L-----------------------GLQERQRLIDKLVK 62 (1326)
Q Consensus 18 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--------~-----------------------~~~~~~~~~~~~~~ 62 (1326)
+++|++.+ +.++.|||||+|+|||+||||| | +.++++.+++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1470)
T PLN03140 24 EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFK 103 (1470)
T ss_pred hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhc
Confidence 68886531 1124678999999999999999 1 22678999999999
Q ss_pred cccccHHHHHHHHHHHhhhcCCCCCcceEEEeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecc
Q 046656 63 VTDVDNEKFMLKLRYRFDRVGIELPKVEVRYEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKD 142 (1326)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~g~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 142 (1326)
+.++|+++|+.++++|.+++|+++|++||||+||+|++++.++++.+||+.|.+.+.++.+.+.++...+++.+++||+|
T Consensus 104 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~ 183 (1470)
T PLN03140 104 VAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKD 183 (1470)
T ss_pred ccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccC
Confidence 99999999999999999999999999999999999999999999999999999988877766544332234456889999
Q ss_pred eeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhh
Q 046656 143 VSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETLAFS 222 (1326)
Q Consensus 143 vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~ 222 (1326)
+|+.++|||+++|+||||||||||||+|+|+++|+.+++|+|.|||+++++..+++.++||+|+|.|++++||+|||.|+
T Consensus 184 vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~ 263 (1470)
T PLN03140 184 ASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFS 263 (1470)
T ss_pred CeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999887778999999999988776678899999999999999999999999
Q ss_pred hhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhH
Q 046656 223 ARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKK 302 (1326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkq 302 (1326)
++|++.+.++++..+..+++++.++.|+.++|.+|++...++++.+..++++++.+||++|+||.||++++++|||||||
T Consensus 264 a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerk 343 (1470)
T PLN03140 264 ARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKK 343 (1470)
T ss_pred HHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccce
Confidence 99998777776666777888888888888889999988888888888899999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcChh
Q 046656 303 RLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCE 382 (1326)
Q Consensus 303 Rvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~ 382 (1326)
||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||++
T Consensus 344 RVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~ 423 (1470)
T PLN03140 344 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRD 423 (1470)
T ss_pred eeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHH
Confidence 99999999999999999999999999999999999999987667899999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCcCCCCCCCCc
Q 046656 383 LVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTPLDKSKSHPA 462 (1326)
Q Consensus 383 ~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 462 (1326)
++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++++.++++.|.++.+.++.
T Consensus 424 ~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 503 (1470)
T PLN03140 424 HILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKA 503 (1470)
T ss_pred HHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999999999999999999999999888788877667878889999999999999998888887777666555666
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHH
Q 046656 463 ALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTF 542 (1326)
Q Consensus 463 ~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~ 542 (1326)
....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++.+.....++..+.|++||++++.++
T Consensus 504 ~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~ 583 (1470)
T PLN03140 504 ALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMF 583 (1470)
T ss_pred cccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 56667899999999999999999999999999999999999999999999999987665555667889999999999999
Q ss_pred hhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHH
Q 046656 543 NGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMA 622 (1326)
Q Consensus 543 ~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~ 622 (1326)
++++++..++.++|+|+|||+..||++|+|+++++++++|+.++++++|++|+|||+||.+++++||.++++++++++++
T Consensus 584 ~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~ 663 (1470)
T PLN03140 584 NGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMA 663 (1470)
T ss_pred HHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCcccc-ccCCC
Q 046656 623 SALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSWRKF-TTNST 701 (1326)
Q Consensus 623 ~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~~~~-~~~~~ 701 (1326)
+++|++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|+++|+++|||.+..|.+. +....
T Consensus 664 ~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~ 743 (1470)
T PLN03140 664 AGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNS 743 (1470)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888643 22234
Q ss_pred cchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccccccC-----Cccccc
Q 046656 702 ESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRIG-----GTIQLS 776 (1326)
Q Consensus 702 ~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 776 (1326)
.+.|.++|..+++...+.|+|++++++++++++|+++++++++|+++..........+........... ......
T Consensus 744 ~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1470)
T PLN03140 744 TRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGN 823 (1470)
T ss_pred cccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccc
Confidence 578999999999998889999999999999999999999999999876655444321110000000000 000000
Q ss_pred c--cCC---CCCCCC-----CCC-ccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEE
Q 046656 777 T--YGS---NSSHSK-----NSG-VVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAF 845 (1326)
Q Consensus 777 ~--~~~---~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i 845 (1326)
. ... ...... ... ........++++.+|+.|..++|+||+|.++++.+.+..+..++++.+|+|||+++
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i 903 (1470)
T PLN03140 824 NTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAF 903 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEE
Confidence 0 000 000000 000 00001123345677888999999999999998876555555555678999999999
Q ss_pred eCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc
Q 046656 846 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR 925 (1326)
Q Consensus 846 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~ 925 (1326)
+||+++||+|||||||||||++|+|+.+++..+|+|.+||.+.+...+++.+|||+|+|.+++.+||+|+|.|++.+|.+
T Consensus 904 ~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~ 983 (1470)
T PLN03140 904 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLP 983 (1470)
T ss_pred ECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCC
Confidence 99999999999999999999999999876678999999998876555677899999999999999999999999988876
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHH
Q 046656 926 TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVK 1005 (1326)
Q Consensus 926 ~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~ 1005 (1326)
.+.+.++++++++++++.++|.+++|+.+|.++.++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+
T Consensus 984 ~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~ 1063 (1470)
T PLN03140 984 KEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1063 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 66666677788999999999999999999988878999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCc
Q 046656 1006 NTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSNSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNP 1085 (1326)
Q Consensus 1006 ~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~np 1085 (1326)
+++++|+||||++|||+.++++.||++++|++||+++|+|+.+++++++++||+ +++|+++||+++||
T Consensus 1064 ~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~------------~~~g~~~~p~~~NP 1131 (1470)
T PLN03140 1064 NTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFE------------AIPGVPKIKEKYNP 1131 (1470)
T ss_pred HHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHH------------hcCCCCCCCCCCCc
Confidence 999889999999999997789999999999988999999999998899999999 67788889999999
Q ss_pred cceEEEeccchhhhhccCCHHHHhhccHHHHHHHHHHHHhcCCCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHhhcChh
Q 046656 1086 ATWMLEVTSTTKELALGIDFTNIYKHSDLYRRNKALIEELSKPAPDSQDIYFPTWYSRSFFMQFLACLWKQHWSYWRNPP 1165 (1326)
Q Consensus 1086 a~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~r~~~~~~R~~~ 1165 (1326)
||||||+++.+.+...+.||++.|++|++++++++.+++++.+.++..+..++++|++|+++|+++|+||+++++||||.
T Consensus 1132 Ad~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~ 1211 (1470)
T PLN03140 1132 ATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPD 1211 (1470)
T ss_pred hhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHh
Confidence 99999999877665556799999999999999988888888777666666667889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhhhhcccchHHhHHHHHhhcCCCCCChHHH
Q 046656 1166 YNAVRFLFTTAIALTFGTMFWDMGTKTKQNQDLFNAMGSMYTAVFFIGAQLCSSVQPVVAVERTVYYREKGAGMYSGMSY 1245 (1326)
Q Consensus 1166 ~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~er~vf~rE~~~~~Y~~~~y 1245 (1326)
|+++|+++++++|+++|++||++|++..+++|+++++|++|++++|+++.++++++|.+..||+||+|||++|||++.+|
T Consensus 1212 ~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y 1291 (1470)
T PLN03140 1212 YNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPY 1291 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHH
Confidence 99999999999999999999999998778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHH--------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 046656 1246 AFAQVMIEIPYVLVLSVVYGVIVYAMIGFEWTAAKFFCL--------LYFTFYGMMTVAMTPNHNIAAIVSILFFGLWNV 1317 (1326)
Q Consensus 1246 ~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~--------~~~~~~g~~~~~~~p~~~~a~~~~~~~~~~~~l 1317 (1326)
++|++++|+||.++++++|++|+|||+||++++++||.| ++++++|+++++++||.++|++++++++++|++
T Consensus 1292 ~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~l 1371 (1470)
T PLN03140 1292 AIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNL 1371 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988733 344678999999999999999999999999999
Q ss_pred hcccccCCC
Q 046656 1318 FSGFVIPRP 1326 (1326)
Q Consensus 1318 f~G~~i~~~ 1326 (1326)
||||++|++
T Consensus 1372 f~Gf~i~~~ 1380 (1470)
T PLN03140 1372 FSGFFIPRP 1380 (1470)
T ss_pred HeeeccChH
Confidence 999999974
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.8e-172 Score=1718.47 Aligned_cols=1192 Identities=32% Similarity=0.551 Sum_probs=976.9
Q ss_pred ccHHHHHHHHHHHhhhcCCCCC--cceEEEeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecce
Q 046656 66 VDNEKFMLKLRYRFDRVGIELP--KVEVRYEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKDV 143 (1326)
Q Consensus 66 ~~~~~~~~~~~~~~~~~g~~~p--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 143 (1326)
-|++++++.+.++.++.+...| +++|+|+||+|++. ..+....||+.|.+.+........+. ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 3566777665555555555555 99999999999993 34556689999887775553332221 12334567899999
Q ss_pred eEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC-ceeeEEEECCccCCCCC--ccceEEEEccCCCCCCCCCHHHHHH
Q 046656 144 SGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL-KVSGRVTYNGHDMNEFV--PQRTAAYISQHDVHIGEMTVRETLA 220 (1326)
Q Consensus 144 s~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 220 (1326)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||.++++.. .++.++||+|+|.|++++||+||+.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974321 25999999998875432 2456999999999999999999999
Q ss_pred hhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhh
Q 046656 221 FSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQ 300 (1326)
Q Consensus 221 f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 300 (1326)
|+++++.+..+.+ ...+.+ ..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9988764321110 000110 01123567899999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcC
Q 046656 301 KKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 380 (1326)
Q Consensus 301 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 380 (1326)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++||+.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999875577888888999999999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCcCCCC---
Q 046656 381 CELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTPLDKS--- 457 (1326)
Q Consensus 381 ~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 457 (1326)
++++.+||+++||.||++.++|||+.+++++.++ +++...+. ....+.++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999887542 22211111 122568899999999887776666554321110
Q ss_pred ------------CCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCC
Q 046656 458 ------------KSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSD 525 (1326)
Q Consensus 458 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~ 525 (1326)
+..+.....++|..++++|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 001112234568899999999999999999999999999999999999999999999987543 34
Q ss_pred cchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccH
Q 046656 526 GGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNI 605 (1326)
Q Consensus 526 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~ 605 (1326)
.+.+.|++||++++.++.++.++...+.++|+|+|||..++|++++|++++.+.++|+.++.+++|++|+|||+||.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 46689999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHH
Q 046656 606 GRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVA 685 (1326)
Q Consensus 606 ~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~ 685 (1326)
++||.+++++++...++.+++++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|+++|++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcccc---ccC---------------------CCcchhhHHhhc-cCcccccchhHHHHHHHHHHHHHHHHHHH
Q 046656 686 NEFFGHSWRKF---TTN---------------------STESLGVQVLKS-RGFFPHAFWYWIGLGAMIGFVLLFNIGFT 740 (1326)
Q Consensus 686 nef~~~~~~~~---~~~---------------------~~~~~g~~~L~~-~~~~~~~~~~w~~~~~lig~~~~f~i~~~ 740 (1326)
|||.+..+.|. +.+ .....|.++|.. +++. ..|+|++++++++++++|.++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~--~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYY--NSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcc--cchhhHHHHHHHHHHHHHHHHHH
Confidence 99999888774 110 013478888884 4544 45899999999999999999999
Q ss_pred HHHHhccccCCCceeeecccccc-ccc-------cccCCcccccccCCCCCCCCCCCccccCCCccC-CcccCCCCceEE
Q 046656 741 LSLTFLNQFEKPQAVILEESESN-YLD-------NRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKR-GMVLPFEPYSLT 811 (1326)
Q Consensus 741 l~l~~l~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 811 (1326)
++++|.++......+........ ... +....+.+..++...... ......... ....+.....++
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLT------DESDDVNDEKDMEKESGEDIFH 761 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccc------cccccccccccccccCCCceEE
Confidence 99999886544433322111000 000 000000000000000000 000000000 000001123578
Q ss_pred EecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcCccCCc
Q 046656 812 FDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISGYPKKQ 890 (1326)
Q Consensus 812 ~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~ 890 (1326)
|+||+|.++.+ .+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ +.+|+|.+||++...
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999887421 13467999999999999999999999999999999999997643 457999999998753
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 046656 891 ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRL 970 (1326)
Q Consensus 891 ~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl 970 (1326)
.+++.+|||+|+|.+++.+||+|++.|++.++.+...++++++++++++++.++|.+++|+.+|.++. +|||||||||
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHH
Confidence 46778999999999999999999999999888766566677778899999999999999999987654 7999999999
Q ss_pred HHHHHHhhCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCC
Q 046656 971 TIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGS 1049 (1326)
Q Consensus 971 ~ia~aL~~~p~-illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~ 1049 (1326)
+||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 99999999999999999999999999888999999999999767889999999999889999999998
Q ss_pred ChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCccceEEEeccchhhhhccCCHHHHhhccHHHHHHHHHHHHhcCCC
Q 046656 1050 NSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNPATWMLEVTSTTKELALGIDFTNIYKHSDLYRRNKALIEELSKPA 1129 (1326)
Q Consensus 1050 ~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 1129 (1326)
+++++++||+ + .|.++||+++|||||+||+++.+.+.....+|.+.|++|++++++.+.++++..+.
T Consensus 991 ~~~~~~~yf~------------~-~G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 1057 (1394)
T TIGR00956 991 NSHTIINYFE------------K-HGAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAEL 1057 (1394)
T ss_pred ccchHHHHHH------------h-cCCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhccc
Confidence 8899999999 3 37667999999999999999875544344689999999999888776666554432
Q ss_pred CCCC---CCCCCCcccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHH
Q 046656 1130 PDSQ---DIYFPTWYSRSFFMQFLACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKTKQNQDLFNAMGSMY 1206 (1326)
Q Consensus 1130 ~~~~---~~~~~~~~~~~~~~q~~~~~~r~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~ 1206 (1326)
.... +....++|++|+++|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|
T Consensus 1058 ~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f 1134 (1394)
T TIGR00956 1058 SKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVF 1134 (1394)
T ss_pred ccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHH
Confidence 2111 111224699999999999999999999999999999999999999999999999997 4789999999999
Q ss_pred HHHHHHHHhhhhhcccchHHhHHHH-HhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHH-----
Q 046656 1207 TAVFFIGAQLCSSVQPVVAVERTVY-YREKGAGMYSGMSYAFAQVMIEIPYVLVLSVVYGVIVYAMIGFEWTAAK----- 1280 (1326)
Q Consensus 1207 ~~~~~~~~~~~~~v~~~~~~er~vf-~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~----- 1280 (1326)
+++++.++.+ ++++|.|..||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++..
T Consensus 1135 ~~~~~~~~~~-~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~ 1213 (1394)
T TIGR00956 1135 MATVLFNPLI-QQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVH 1213 (1394)
T ss_pred HHHHHHHHHH-HHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCccccccccc
Confidence 9988877763 45668888888875 9999999999999999999999999999999999999999999987654
Q ss_pred --HHHH--------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCC
Q 046656 1281 --FFCL--------LYFTFYGMMTVAMTPNHNIAAIVSILFFGLWNVFSGFVIPRP 1326 (1326)
Q Consensus 1281 --f~~~--------~~~~~~g~~~~~~~p~~~~a~~~~~~~~~~~~lf~G~~i~~~ 1326 (1326)
|+.| ++.+++|+++++++||.++|+.+++++++++++||||++|++
T Consensus 1214 ~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~ 1269 (1394)
T TIGR00956 1214 ERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPS 1269 (1394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChh
Confidence 4421 234568999999999999999999999999999999999863
No 4
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.8e-79 Score=765.70 Aligned_cols=570 Identities=26% Similarity=0.431 Sum_probs=479.8
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 212 (1326)
+++++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.++++
T Consensus 34 ~~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 34 ERPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred ccCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCcc
Confidence 34467899999999999999999999999999999999999887545689999999987654456789999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+|||.|+++++.+... .+ ++....++++++.+||++++||.||++.
T Consensus 114 lTV~e~l~f~~~~~~~~~~-------~~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~ 162 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRRV-------TK------------------------KEKRERVDEVLQALGLRKCANTRIGVPG 162 (617)
T ss_pred CcHHHHHHHHHhcCCCCCC-------CH------------------------HHHHHHHHHHHHHcCchhcCcCccCCCC
Confidence 9999999999887643210 00 1122357889999999999999999864
Q ss_pred -ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 293 -VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 293 -~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|+
T Consensus 163 ~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~ 241 (617)
T TIGR00955 163 RVKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMA 241 (617)
T ss_pred CCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEee
Confidence 789999999999999999999999999999999999999999999999876 478888999999899999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhc
Q 046656 372 DGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELR 451 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~ 451 (1326)
+|+++|+|+++++.+||+++|++||++.+++||+.++.+.....+. . ...+.+++.+.++.+..+++..+...
T Consensus 242 ~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~ 314 (617)
T TIGR00955 242 EGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTN 314 (617)
T ss_pred CCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhh
Confidence 9999999999999999999999999999999999998765322110 0 00123455566666555444433322
Q ss_pred CcCCCCC---CCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcch
Q 046656 452 TPLDKSK---SHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGI 528 (1326)
Q Consensus 452 ~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~ 528 (1326)
....... ..........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~ 391 (617)
T TIGR00955 315 LWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQN 391 (617)
T ss_pred hhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHH
Confidence 1111000 00011122456789999999999999999999999999999999999999999999986543 23455
Q ss_pred hhHHHHHHHHHHHHhhhHH-HHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHH
Q 046656 529 YIGAMFFAVIMTTFNGMSD-ISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGR 607 (1326)
Q Consensus 529 ~~g~lff~~~~~~~~~~~~-~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ 607 (1326)
..|++|+.++...+.++.. +.....++++|+||+..++|++++|++++.+.++|+.++.+++|++++|||+|+.+++++
T Consensus 392 ~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~ 471 (617)
T TIGR00955 392 INGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATH 471 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHH
Confidence 6888999988887776544 455557999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHH
Q 046656 608 LFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANE 687 (1326)
Q Consensus 608 ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~ne 687 (1326)
||.+++++++...++.+++.++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++.||
T Consensus 472 f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~ne 551 (617)
T TIGR00955 472 FLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQ 551 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCc-cccccCC---CcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 046656 688 FFGHSW-RKFTTNS---TESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFL 746 (1326)
Q Consensus 688 f~~~~~-~~~~~~~---~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l 746 (1326)
|.+..+ .|...+. +...|..+++.+++... ++|.+++++++++++|.++.+++|++.
T Consensus 552 f~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 552 WSDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred hCCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998775 3432111 23458899999988654 459999999999999999999999863
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.8e-78 Score=757.47 Aligned_cols=608 Identities=22% Similarity=0.353 Sum_probs=469.3
Q ss_pred CcceEEEeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecceeEEEeCceEEEEecCCCCChhHH
Q 046656 87 PKVEVRYEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTL 166 (1326)
Q Consensus 87 p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTL 166 (1326)
+.++++|.|+++.+.......+... +.+.+.. ......++++++++++|+|+|+.++|||+++|+||||||||||
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~-~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTL 110 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSN----IKRILGH-KPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTL 110 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccc----ccccccc-ccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHH
Confidence 5789999999999753310111110 1110000 0011223344556789999999999999999999999999999
Q ss_pred HHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhC
Q 046656 167 LLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAG 246 (1326)
Q Consensus 167 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1326)
|++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..+
T Consensus 111 L~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~------ 175 (659)
T PLN03211 111 LNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTK------ 175 (659)
T ss_pred HHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCH------
Confidence 99999998774 3589999999887532 23569999999999999999999999876542110 000
Q ss_pred CCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCC
Q 046656 247 IKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGL 326 (1326)
Q Consensus 247 i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgL 326 (1326)
++....++++++.+||++++||.+|++..++|||||||||+||++|+.+|+|++|||||+||
T Consensus 176 ------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgL 237 (659)
T PLN03211 176 ------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGL 237 (659)
T ss_pred ------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCc
Confidence 11223467889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHH
Q 046656 327 DSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQ 406 (1326)
Q Consensus 327 D~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~ 406 (1326)
|+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||.||++.|||||+.
T Consensus 238 D~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~l 316 (659)
T PLN03211 238 DATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFLL 316 (659)
T ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence 99999999999999876 46788888888877899999999999999999999999999999999999999999999999
Q ss_pred HhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcC---cCCCCC-----CCCc-cccCCCCCCcHHHHH
Q 046656 407 EVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRT---PLDKSK-----SHPA-ALTTKGYGVGMKELF 477 (1326)
Q Consensus 407 ~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~~ 477 (1326)
++.+...+.+.......+ ...+.+.+.|++.. .++..+.... +....+ ..+. ......+..+++.|+
T Consensus 317 dv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~ 392 (659)
T PLN03211 317 DLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQF 392 (659)
T ss_pred HHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHH
Confidence 998754321100000111 01123333443211 1111111000 000000 0000 001122456899999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHH-hhhHHHHHHhhcch
Q 046656 478 KANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTF-NGMSDISMTVAKLP 556 (1326)
Q Consensus 478 ~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~~~~~~~~~~ 556 (1326)
..+++|.++. +|+......|+++.+++|+++|++||+.+ ..+.+.+.|++||.+++..+ ..+..+.....+++
T Consensus 393 ~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~ 466 (659)
T PLN03211 393 SILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERA 466 (659)
T ss_pred HHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 9999999888 78887788999999999999999999874 23356678999999877655 44566677778999
Q ss_pred hhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH
Q 046656 557 IFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNM 636 (1326)
Q Consensus 557 vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~ 636 (1326)
+|+||+..++|++++|++++.+.++|+.++.+++|++++|||+|+.+++++||.+++++++...++++++.+++++++++
T Consensus 467 v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~ 546 (659)
T PLN03211 467 IFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDA 546 (659)
T ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCc-----cccccCCCcchhhHHhhc
Q 046656 637 IVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSW-----RKFTTNSTESLGVQVLKS 711 (1326)
Q Consensus 637 ~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~L~~ 711 (1326)
.+|+.+++++++++++|+||+++ +||+||+|++|+||+.|++++++.|||.+.+. .|.........+..++..
T Consensus 547 ~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~~ 624 (659)
T PLN03211 547 KKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVEE 624 (659)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccchh
Confidence 99999999999999999999996 79999999999999999999999999976432 332111000011112222
Q ss_pred cCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 046656 712 RGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLN 747 (1326)
Q Consensus 712 ~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~ 747 (1326)
..+. ....|.+++++++++++|.++.+++|++.+
T Consensus 625 ~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 625 DVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222 235788999999999999999999987654
No 6
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-79 Score=757.20 Aligned_cols=582 Identities=32% Similarity=0.525 Sum_probs=490.3
Q ss_pred CcceEEEeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecceeEEEeCceEEEEecCCCCChhHH
Q 046656 87 PKVEVRYEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTL 166 (1326)
Q Consensus 87 p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTL 166 (1326)
..++++|+|+++++... ..+.+++|+||||.++|||++||+||+|||||||
T Consensus 22 ~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTL 72 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTTL 72 (613)
T ss_pred ccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHHH
Confidence 46788999999986432 0145789999999999999999999999999999
Q ss_pred HHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhC
Q 046656 167 LLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAG 246 (1326)
Q Consensus 167 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1326)
|++|+|+..+..+++|+|++||++.+....++.+|||.|+|.++|++||+|++.|+|.++.+.+ +.
T Consensus 73 L~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~------- 138 (613)
T KOG0061|consen 73 LNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LS------- 138 (613)
T ss_pred HHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CC-------
Confidence 9999999987667899999999887776778899999999999999999999999999875432 11
Q ss_pred CCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCC
Q 046656 247 IKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGL 326 (1326)
Q Consensus 247 i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgL 326 (1326)
.++...++|.+++.|||++|+||++|+...||+||||||||+||..|+.+|+||+||||||||
T Consensus 139 -----------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSGL 201 (613)
T KOG0061|consen 139 -----------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSGL 201 (613)
T ss_pred -----------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCCc
Confidence 123456789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHH
Q 046656 327 DSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQ 406 (1326)
Q Consensus 327 D~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~ 406 (1326)
|+.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||++.|++||+..||+||+.
T Consensus 202 DS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l 280 (613)
T KOG0061|consen 202 DSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFLL 280 (613)
T ss_pred chhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHHH
Confidence 999999999999999986 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcc--ccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHH
Q 046656 407 EVTSRK--DQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISRE 484 (1326)
Q Consensus 407 ~~~s~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~ 484 (1326)
++.+.. .+..... .......+.++..+...+............+ ........++|.|+..+.+|.
T Consensus 281 ~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~q~~~L~~R~ 347 (613)
T KOG0061|consen 281 DLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLSTSK-----KVEIGTSPSWWTQFKILLKRS 347 (613)
T ss_pred HHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhccccc-----ccccccCCcHHHHHHHHHHHH
Confidence 987742 1110000 0000001111100000000000000000000 000111678999999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHHhhhH-HHHHHhhcchhhHhhhc
Q 046656 485 FLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTFNGMS-DISMTVAKLPIFYKQRG 563 (1326)
Q Consensus 485 ~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~k~r~ 563 (1326)
+..++|++.++..|+++.+.+++++|.+||+.+.+.. ....+.|++||.+.+..+..+. .+.....++++|.||+.
T Consensus 348 ~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~ 424 (613)
T KOG0061|consen 348 LKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETS 424 (613)
T ss_pred hHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999854433 2235788888888888776666 46777889999999999
Q ss_pred cCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Q 046656 564 LRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFG 643 (1326)
Q Consensus 564 ~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~ 643 (1326)
.+.|+.++|++++.+.++|+.++.+++|..++|||+|+.++..+|+.+++..++...++.++..+++++.++...|.+++
T Consensus 425 ~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~ 504 (613)
T KOG0061|consen 425 SGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLG 504 (613)
T ss_pred cCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCcccccc--CCCcchhhHHhhccCcccccchh
Q 046656 644 SFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSWRKFTT--NSTESLGVQVLKSRGFFPHAFWY 721 (1326)
Q Consensus 644 ~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~~ 721 (1326)
+++++.+++++||+++.+.+|.||.|+.|+|+..|++|+++.|||.+....|... ..+...|.+++...++... ..
T Consensus 505 ~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 582 (613)
T KOG0061|consen 505 PVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--SF 582 (613)
T ss_pred HHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--cc
Confidence 9999999999999999999999999999999999999999999999744444433 2345678889998888655 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Q 046656 722 WIGLGAMIGFVLLFNIGFTLSLTFLN 747 (1326)
Q Consensus 722 w~~~~~lig~~~~f~i~~~l~l~~l~ 747 (1326)
|.++.++.++.++|.++.++++++..
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999988743
No 7
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-79 Score=761.52 Aligned_cols=485 Identities=34% Similarity=0.609 Sum_probs=417.3
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcC
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISG 885 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g 885 (1326)
+..+.|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 457899999988754321 3478999999999999999999999999999999999998764 6899999999
Q ss_pred ccCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 886 YPKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 886 ~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
++.....+++.+|||.|+|.+.|.+||+|++.|+|.+|.+...++++++++|+++++.++|.+++|+++|.++.+|+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88877888999999999999999999999999999999999889999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||||+||.+|+.||+||||||||||||+.++..++++|++++++|+|||||+|||+.++++.||++++|.+ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred CCCCChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCccceEEEeccch---hhhhc-cC--CHHHHhhccHHHHHHH
Q 046656 1046 PLGSNSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNPATWMLEVTSTT---KELAL-GI--DFTNIYKHSDLYRRNK 1119 (1326)
Q Consensus 1046 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~v~~~~---~~~~~-~~--~~~~~~~~s~~~~~~~ 1119 (1326)
+. +++.+||.++ |.| ||+++|||||++|+++.. ++... .. ...+.++..+...+..
T Consensus 254 ~~----~~~~~ff~~~-------------G~~-~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (613)
T KOG0061|consen 254 SP----RELLEFFSSL-------------GFP-CPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTL 315 (613)
T ss_pred CH----HHHHHHHHhC-------------CCC-CCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhH
Confidence 96 7899999943 654 999999999999998842 11100 00 0111111011111111
Q ss_pred HHHHHhcCCCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHH
Q 046656 1120 ALIEELSKPAPDSQDIYFPTWYSRSFFMQFLACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKTKQNQDLF 1199 (1326)
Q Consensus 1120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~r~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1199 (1326)
. ...+......+ .+.....+||.|+..+++|.+++.+|+|.+...|+++.+++|+++|++||+.+++ ..+++
T Consensus 316 ~---~~~~~~~~~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~ 387 (613)
T KOG0061|consen 316 E---ALEKSLSTSKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQ 387 (613)
T ss_pred H---HHhhhcccccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHH
Confidence 0 11111111111 1112278999999999999999999999999999999999999999999999874 45666
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchHHhHHHHHhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHH
Q 046656 1200 NAMGSMYTAVFFIGAQLCSSVQPVVAVERTVYYREKGAGMYSGMSYAFAQVMIEIPYVLVLSVVYGVIVYAMIGFEWTAA 1279 (1326)
Q Consensus 1200 ~~~g~~~~~~~~~~~~~~~~v~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~ 1279 (1326)
++.|.+|+.+.++.+..+...++.|+.||++|.||+.+|+|+..+|++|++++++|+.++.+++|++|+|||+|++++..
T Consensus 388 ~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~ 467 (613)
T KOG0061|consen 388 NRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLS 467 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchH
Confidence 99999999998888888887789999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHH--------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCC
Q 046656 1280 KFFCLLY--------FTFYGMMTVAMTPNHNIAAIVSILFFGLWNVFSGFVIPRP 1326 (1326)
Q Consensus 1280 ~f~~~~~--------~~~~g~~~~~~~p~~~~a~~~~~~~~~~~~lf~G~~i~~~ 1326 (1326)
.|+.|+. ...+|++++++.||...|..+++++...+++|+||+++.+
T Consensus 468 ~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~ 522 (613)
T KOG0061|consen 468 RFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFD 522 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcc
Confidence 8774432 2357899999999999999999999999999999999853
No 8
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.8e-78 Score=758.74 Aligned_cols=491 Identities=27% Similarity=0.449 Sum_probs=405.2
Q ss_pred CceEEEecccceeccchhh--------------hcc--ccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcC
Q 046656 807 PYSLTFDDVTYSADMPKEM--------------KLK--GVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 870 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~--------------~~~--~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g 870 (1326)
++.+.|.|++|.++..... +.. ....+++.+|+|||+++++||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5789999999988654210 001 112345789999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccc
Q 046656 871 RKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLR 950 (1326)
Q Consensus 871 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~ 950 (1326)
+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876544689999999886432 3456899999999999999999999988776554555666677899999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhc
Q 046656 951 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFD 1030 (1326)
Q Consensus 951 ~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1030 (1326)
|+.+|....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99998776788999999999999999999999999999999999999999999999988899999999999877899999
Q ss_pred eeeEEecCcEEEEEcCCCCChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCccceEEEeccchhhhh-----cc---
Q 046656 1031 ELFLMKRGGQEIYVGPLGSNSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNPATWMLEVTSTTKELA-----LG--- 1102 (1326)
Q Consensus 1031 ~v~~l~~gg~~~~~G~~~~~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~v~~~~~~~~-----~~--- 1102 (1326)
++++|++ |+++|.|+. +++++||+ ++ |. +||+++|||||++|+++...+.. ..
T Consensus 276 ~iilL~~-G~iv~~G~~----~~~~~~f~------------~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~ 336 (659)
T PLN03211 276 SVLVLSE-GRCLFFGKG----SDAMAYFE------------SV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNV 336 (659)
T ss_pred eEEEecC-CcEEEECCH----HHHHHHHH------------HC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchH
Confidence 9999985 799999996 68999999 44 54 59999999999999987532100 00
Q ss_pred -CCHHHHhhccHHHHHHHHHHHHh--cCCCCC-----CCCCC--CCCcccCcHHHHHHHHHHHHHHHhhcChhHHHHHHH
Q 046656 1103 -IDFTNIYKHSDLYRRNKALIEEL--SKPAPD-----SQDIY--FPTWYSRSFFMQFLACLWKQHWSYWRNPPYNAVRFL 1172 (1326)
Q Consensus 1103 -~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~-----~~~~~--~~~~~~~~~~~q~~~~~~r~~~~~~R~~~~~~~r~~ 1172 (1326)
....+.|+++. .++..+.++.. ...... ..+.. ..+.+..+|++|+.+|++|++++ ||++.+..+|++
T Consensus 337 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~ 414 (659)
T PLN03211 337 KQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVF 414 (659)
T ss_pred HHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHH
Confidence 11234453211 11111111111 110000 00000 11235678999999999999988 999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhhhhcccchHHhHHHHHhhcCCCCCChHHHHHHHHHH
Q 046656 1173 FTTAIALTFGTMFWDMGTKTKQNQDLFNAMGSMYTAVFFIGAQLCSSVQPVVAVERTVYYREKGAGMYSGMSYAFAQVMI 1252 (1326)
Q Consensus 1173 ~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~~~ 1252 (1326)
+++++|+++|++||+++ ..+++++.|++|++++++++.+++.++|.|+.||+||+||+.+|+|++.+|++|++++
T Consensus 415 ~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~ 489 (659)
T PLN03211 415 QVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVG 489 (659)
T ss_pred HHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHH
Confidence 99999999999999985 4678999999999998988888778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccccccHHHHHHHH--------HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccC
Q 046656 1253 EIPYVLVLSVVYGVIVYAMIGFEWTAAKFFCLL--------YFTFYGMMTVAMTPNHNIAAIVSILFFGLWNVFSGFVIP 1324 (1326)
Q Consensus 1253 e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~--------~~~~~g~~~~~~~p~~~~a~~~~~~~~~~~~lf~G~~i~ 1324 (1326)
|+|+.++.+++|++|+|||+|+++++.+||.|+ ....+|+++++++||..+|+.++++++.++++|+||+|+
T Consensus 490 elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~ 569 (659)
T PLN03211 490 DLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH 569 (659)
T ss_pred HHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh
Confidence 999999999999999999999999999988442 224578999999999999999999999999999999985
No 9
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.5e-76 Score=789.00 Aligned_cols=594 Identities=23% Similarity=0.410 Sum_probs=494.2
Q ss_pred CCCcceEEEeccEEEEEEecCcCcCCCchhhHHHHHHHHhhhhhhcccccccceeecceeEEEeCceEEEEecCCCCChh
Q 046656 85 ELPKVEVRYEHLNIEAEAFLASKALPTFTSFFTNIIEAFFNSIHILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKT 164 (1326)
Q Consensus 85 ~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKS 164 (1326)
+...+.+.|+|+++.++..... +....+++++++|+|||+.++||++++|+||||||||
T Consensus 862 ~~~~~~~~~~~v~y~v~~~~~~---------------------~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKT 920 (1470)
T PLN03140 862 PFTPLAMSFDDVNYFVDMPAEM---------------------KEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKT 920 (1470)
T ss_pred CCCcceEEEEEEEEEEccCccc---------------------cccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHH
Confidence 4445678999999997543110 0011223456799999999999999999999999999
Q ss_pred HHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHH
Q 046656 165 TLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKE 244 (1326)
Q Consensus 165 TLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 244 (1326)
|||++|+|+.++. ..+|+|.+||++..+...++.+|||+|+|.|++.+||+|||.|++.++.+.. ..+
T Consensus 921 TLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~-------~~~---- 988 (1470)
T PLN03140 921 TLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKE-------VSK---- 988 (1470)
T ss_pred HHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCC-------CCH----
Confidence 9999999997642 4589999999887543345679999999999999999999999876542111 000
Q ss_pred hCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCC
Q 046656 245 AGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISN 324 (1326)
Q Consensus 245 ~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEpts 324 (1326)
.+....++++++.+||++++|+.+|+..+++|||||||||+||++|+.+|++|||||||+
T Consensus 989 --------------------~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTs 1048 (1470)
T PLN03140 989 --------------------EEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1048 (1470)
T ss_pred --------------------HHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Confidence 111234788999999999999999988888999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC-CeEEEEcCh----hhHHHHHHhc-CC-CCCC
Q 046656 325 GLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD-GQIVYQGPC----ELVLDFFESM-GF-KCPE 397 (1326)
Q Consensus 325 gLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~-G~iv~~G~~----~~~~~~F~~l-G~-~~p~ 397 (1326)
|||+.++..+++.|+++++ .+.|+|+++||+..+++++||++++|++ |+++|+|+. +++.+||+++ |+ +||+
T Consensus 1049 gLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~ 1127 (1470)
T PLN03140 1049 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKE 1127 (1470)
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCC
Confidence 9999999999999999876 4778888888888789999999999996 899999996 6899999998 66 4999
Q ss_pred CCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhc---CcCCCCCCCCccccCCCCCCcHH
Q 046656 398 RKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELR---TPLDKSKSHPAALTTKGYGVGMK 474 (1326)
Q Consensus 398 ~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~s~~ 474 (1326)
..|||||+.++++..... ....++.+.|+.++.+++..+.++ .+.... +.......|..+++
T Consensus 1128 ~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~ 1192 (1470)
T PLN03140 1128 KYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGA---SDLYFATQYSQSTW 1192 (1470)
T ss_pred CCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCc---cccccCccccCCHH
Confidence 999999999987643211 112357778888776665544332 221111 11112356889999
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHHhhhHH-HHHHhh
Q 046656 475 ELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTFNGMSD-ISMTVA 553 (1326)
Q Consensus 475 ~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~-~~~~~~ 553 (1326)
.|++.|++|+++.++|++.....|+++.+++|+++|++||+.+.+..+..+.+...|++|+++++..++.... ++....
T Consensus 1193 ~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~ 1272 (1470)
T PLN03140 1193 GQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAV 1272 (1470)
T ss_pred HHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998665555565667899999888877765544 345556
Q ss_pred cchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 046656 554 KLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAG 633 (1326)
Q Consensus 554 ~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~ 633 (1326)
+|++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+||.++++.||.+++++++...++.+++.++++++
T Consensus 1273 eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~ 1352 (1470)
T PLN03140 1273 ERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLT 1352 (1470)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCccccccCC-CcchhhHH-hhc
Q 046656 634 RNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSWRKFTTNS-TESLGVQV-LKS 711 (1326)
Q Consensus 634 ~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-L~~ 711 (1326)
++..+|..++++++.++++|+||+++.++||+||+|+||+||+.|++++++.|||.+....|.+++. ....+.++ +..
T Consensus 1353 p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1432 (1470)
T PLN03140 1353 PNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDH 1432 (1470)
T ss_pred CcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999987765544321 12234455 567
Q ss_pred cCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 046656 712 RGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQF 749 (1326)
Q Consensus 712 ~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~ 749 (1326)
+|+... |.|.+++++++++++|.+++++++++++..
T Consensus 1433 ~g~~~~--~~~~~~~il~~~~~~f~~~~~~~~~~~~~q 1468 (1470)
T PLN03140 1433 YGYDPD--FMGPVAAVLVGFTVFFAFIFAFCIRTLNFQ 1468 (1470)
T ss_pred cCcCcc--cccchhhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 788644 679999999999999999999999998753
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-76 Score=744.80 Aligned_cols=471 Identities=31% Similarity=0.514 Sum_probs=410.1
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcCccCCcccccceEEEeecCCCCCCCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISGYPKKQETFTRISGYCEQNDIHSPLVT 911 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~T 911 (1326)
+++.+|+|+|++++|||+++|+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987643 358999999998765567788999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPG-ESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 990 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~-~~~LSgGqrqrl~ia~aL~~~p~illLDEPts 990 (1326)
|+||+.|++.++.+.....++++++++++++.++|.+++|+.+|.++ .++||||||||++||+||+.+|++|||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988877766777778889999999999999999999754 56899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCChhhHHHHHhhcCcchhhHHh
Q 046656 991 GLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSNSSDLISYLQLMPMHVTFIFM 1070 (1326)
Q Consensus 991 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~~~~~~~~f~~~~~~~~~~~~ 1070 (1326)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+|+. +++.+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~---------- 260 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSD---------- 260 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHH----------
Confidence 99999999999999999888999999999998889999999999984 799999996 678999993
Q ss_pred hhccCcccccCCCCccceEEEeccchhhhhc-----cCCHHHHhhccHHHHHHHHHHHHhcCCCCC---CCCCCCCCccc
Q 046656 1071 KAISGVEKIKDGYNPATWMLEVTSTTKELAL-----GIDFTNIYKHSDLYRRNKALIEELSKPAPD---SQDIYFPTWYS 1142 (1326)
Q Consensus 1071 ~~~~g~~~~~~~~npa~~~l~v~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 1142 (1326)
+ |. +||++.|||||++|+++...+... ..++.+.|++|+.+++..+.+.....+.++ ..+....++|.
T Consensus 261 --~-g~-~~p~~~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (617)
T TIGR00955 261 --L-GH-PCPENYNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYN 336 (617)
T ss_pred --c-CC-CCCCCCChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccC
Confidence 3 54 599999999999999875432211 124667787777766554443322211111 11111235688
Q ss_pred CcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhhhhccc
Q 046656 1143 RSFFMQFLACLWKQHWSYWRNPPYNAVRFLFTTAIALTFGTMFWDMGTKTKQNQDLFNAMGSMYTAVFFIGAQLCSSVQP 1222 (1326)
Q Consensus 1143 ~~~~~q~~~~~~r~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 1222 (1326)
.+++.|+..|++|+++++||||.+...|+++.+++|+++|++||+++++ +++++++.|++|++++++++.++..+.+
T Consensus 337 ~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~~g~lf~~~~~~~f~~~~~~~~ 413 (617)
T TIGR00955 337 ASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNINGALFLFLTNMTFQNVFPVIN 413 (617)
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999874 6788999999999998888887777789
Q ss_pred chHHhHHHHHhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHH--------HHHHHHHH
Q 046656 1223 VVAVERTVYYREKGAGMYSGMSYAFAQVMIEIPYVLVLSVVYGVIVYAMIGFEWTAAKFFCLLY--------FTFYGMMT 1294 (1326)
Q Consensus 1223 ~~~~er~vf~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~--------~~~~g~~~ 1294 (1326)
.++.||.+|+||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++..||.|++ ...+|+++
T Consensus 414 ~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i 493 (617)
T TIGR00955 414 VFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLI 493 (617)
T ss_pred HHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998874422 23578999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHhhcccccCC
Q 046656 1295 VAMTPNHNIAAIVSILFFGLWNVFSGFVIPR 1325 (1326)
Q Consensus 1295 ~~~~p~~~~a~~~~~~~~~~~~lf~G~~i~~ 1325 (1326)
++++||..+|..++++++.++++|+||++|+
T Consensus 494 ~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~ 524 (617)
T TIGR00955 494 SCAFSSTSMALTVGPPFVIPFLLFGGFFINS 524 (617)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHhhcccCh
Confidence 9999999999999999999999999999986
No 11
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-74 Score=740.27 Aligned_cols=766 Identities=21% Similarity=0.279 Sum_probs=437.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVR 216 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 216 (1326)
.+.|+|||+++++|++++|+||.||||||||.+|.|+++.. +|+|.++| .+|||+|++|.+ +.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~-ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQ-NGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhh-CCcHH
Confidence 34899999999999999999999999999999999999865 99999999 589999998855 78999
Q ss_pred HHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCC
Q 046656 217 ETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGI 296 (1326)
Q Consensus 217 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 296 (1326)
|||.|+..+. .+||+.+.+.|..+++..+ |+.+..|.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~--------------------------------Lp~GD~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEI--------------------------------LPFGDLTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhh--------------------------------cCCCCcceecCCcc-CC
Confidence 9999997764 4677777777766655433 45577899997655 79
Q ss_pred ChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEE
Q 046656 297 SGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIV 376 (1326)
Q Consensus 297 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 376 (1326)
|||||||+++|||+++++||++||+|.|++|+++..+|++.+... .++++|+|.++| .-+..+.+|.|++|++|+|.
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~--~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRG--LLRGKTVILVTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHh--hhcCCEEEEEeC-chhhhhhCCEEEEecCCeEe
Confidence 999999999999999999999999999999999999999877632 345566666677 55788999999999999999
Q ss_pred EEcChhhHHH---HHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCc
Q 046656 377 YQGPCELVLD---FFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTP 453 (1326)
Q Consensus 377 ~~G~~~~~~~---~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~ 453 (1326)
..|+++|+.+ .|+++ ...... ..+.. .....+.......+. +. +.........+.
T Consensus 722 ~~Gty~el~~~~~~~~~l-~~~~~~------------~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~---- 779 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-AHEEES------------EQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK---- 779 (1381)
T ss_pred cccCHHHHHhcchhHHHH-hhccch------------hhccc---cccccccccccccch-hh-hhhhhhcccccc----
Confidence 9999999973 23332 000000 00000 000000000000000 00 000000000000
Q ss_pred CCCCCCCCcccc---CCCCCCcHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHH-HHHHHhhhhccccCCCCc--c---
Q 046656 454 LDKSKSHPAALT---TKGYGVGMKELFKANISREFLLIKRNSFVYI-FKLIQLST-MALVSSTLFFRANMNKDS--V--- 523 (1326)
Q Consensus 454 ~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~-~~~~~~~~-~ali~g~~f~~~~~~~~~--~--- 523 (1326)
....+....... ....+.-.|...+ .+........... +-+.+... ...+.+..|+..|.+... .
T Consensus 780 ~~~~~~~~~~~~~~ee~~~G~v~~~vY~-----~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 780 SKDEKEEEDKLVQEEERETGKVSWSVYK-----KYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred cccccchhhHHHHHHHHhcCEeeHHHHH-----HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 000000000000 0001111111111 1111101111111 11112222 233445556555543321 1
Q ss_pred CCcchhhHHH----HHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeecc
Q 046656 524 SDGGIYIGAM----FFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAI 599 (1326)
Q Consensus 524 ~~~~~~~g~l----ff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~ 599 (1326)
.+...|.+.. +...++.++.++......+ ...+..+..+.+.+++.|++|++++
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l------------~aS~~Lh~~ml~~Ilrapm~FFdtT---------- 912 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGL------------KASRKLHDKLLNSILRAPMSFFDTT---------- 912 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHhCcchhcCCC----------
Confidence 1222333322 2222222222221111111 1122234557788999999998765
Q ss_pred CccccHHHHHHHHH---------HHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHHHHhccccCccchhhH
Q 046656 600 GFDPNIGRLFKQLL---------LLLFINQMASALFRFIAAA----GRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNG 666 (1326)
Q Consensus 600 gl~~~~~~ff~~~l---------~~~l~~~~~~~lf~~i~~~----~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~ 666 (1326)
..||+++++. +.+.+..+...+..+++.+ ..++.....+.++.++.+++..-|.-..+++.+
T Consensus 913 ----P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR- 987 (1381)
T KOG0054|consen 913 ----PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR- 987 (1381)
T ss_pred ----CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-
Confidence 4677777762 2222222222222222221 222222222222222222222222222222211
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCCccccccCCCcchhhHHhh--ccC-cccccchhHHHHH--HHHHHHHHHHHHHHH
Q 046656 667 WIWGYWCSPMMYAQNAIVANEFFGHSWRKFTTNSTESLGVQVLK--SRG-FFPHAFWYWIGLG--AMIGFVLLFNIGFTL 741 (1326)
Q Consensus 667 ~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~--~~~-~~~~~~~~w~~~~--~lig~~~~f~i~~~l 741 (1326)
.-....||++-.+..-+..--.-+.+...... ...-...++ ... |.......|.++- .+...++++..++.+
T Consensus 988 -LesitRSPi~sh~~Etl~GlsTIRAf~~~~rf--~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~v 1064 (1381)
T KOG0054|consen 988 -LESITRSPIYSHFSETLQGLSTIRAFGKEERF--IQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAV 1064 (1381)
T ss_pred -hhhcccchHHHhHHHHhcCcceeeeccccHHH--HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112355544443221110000000000000 000000000 000 0000111244432 121121111111111
Q ss_pred HHHhccccCCCceeeeccc--------------cccccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCC
Q 046656 742 SLTFLNQFEKPQAVILEES--------------ESNYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEP 807 (1326)
Q Consensus 742 ~l~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1326)
+..-.. ..+..+....+ .....++.+.+++|..+|.....+.+..... .+++..+|..
T Consensus 1065 -l~~~~~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~-----~~pp~~WP~~- 1136 (1381)
T KOG0054|consen 1065 -LLPSGL-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEE-----SRPPPSWPSK- 1136 (1381)
T ss_pred -HccCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcC-----CCCCCCCCCC-
Confidence 111000 01111111111 0112234445555666555433321111000 0011123322
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
-.|+|+|++..|.. +...||||||++|+|||++||||++|||||||+++|.+... +.+|+|.|||.+
T Consensus 1137 G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvd 1203 (1381)
T KOG0054|consen 1137 GEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVD 1203 (1381)
T ss_pred CeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCee
Confidence 26899998766631 23569999999999999999999999999999999999876 468999999999
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccccccccc------CCC
Q 046656 888 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVG------LPG 958 (1326)
Q Consensus 888 ~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg------~~~ 958 (1326)
+.+ .++|++++.+||++.++.. |+|+|| |+..+..++.++++||..+|.+...+..+ .++
T Consensus 1204 I~~igL~dLRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~eg 1272 (1381)
T KOG0054|consen 1204 ISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEG 1272 (1381)
T ss_pred cccccHHHHHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCC
Confidence 875 3578889999999987753 666665 56666777889999999999765433221 135
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+..+ +||||+++|+.+. ...+|||+||++
T Consensus 1273 G~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T--Vmd~DrVlVld~- 1348 (1381)
T KOG0054|consen 1273 GENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT--VMDSDRVLVLDA- 1348 (1381)
T ss_pred CccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch--hhhcCeEEEeeC-
Confidence 568999999999999999999999999999999999999999999999775 7999999999873 456899999996
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++.+|++
T Consensus 1349 G~v~EfdsP 1357 (1381)
T KOG0054|consen 1349 GRVVEFDSP 1357 (1381)
T ss_pred CeEeecCCh
Confidence 799999987
No 12
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-74 Score=719.35 Aligned_cols=777 Identities=22% Similarity=0.280 Sum_probs=420.6
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIG 211 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 211 (1326)
++..||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|.++|.++.++.. +.++|.|.|+|.+|
T Consensus 364 pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF- 439 (1228)
T KOG0055|consen 364 PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLF- 439 (1228)
T ss_pred CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhh-
Confidence 3567999999999999999999999999999999999999998 9999999999987754 46899999999765
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
..||+|||.|+... ...+...+++.. .+..--+..|++..||.||++
T Consensus 440 ~~tI~eNI~~G~~d-------------------------at~~~i~~a~k~--------ana~~fi~~lp~g~~T~vge~ 486 (1228)
T KOG0055|consen 440 ATTIRENIRYGKPD-------------------------ATREEIEEAAKA--------ANAHDFILKLPDGYDTLVGER 486 (1228)
T ss_pred cccHHHHHhcCCCc-------------------------ccHHHHHHHHHH--------ccHHHHHHhhHHhhcccccCC
Confidence 67999999996421 111111111111 111122334788999999987
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+ .|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|.+.. .++|+|+ +.|....+.+ +|+|++|+
T Consensus 487 g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~ 561 (1228)
T KOG0055|consen 487 GV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVME 561 (1228)
T ss_pred CC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEE
Confidence 66 499999999999999999999999999999999999999999998864 3667766 6777766666 99999999
Q ss_pred CCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHH--HHhcCccccchhhhccCCCcccCCHHHHHHHHHhch----hhhh
Q 046656 372 DGQIVYQGPCELVLDFFESMGFKCPERKSVADFL--QEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFH----VGQK 445 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l--~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~----~~~~ 445 (1326)
+|+|++.|+++|+... ....++.+ |+.....+. ..+..+.. ++.....+.+. ....
T Consensus 562 ~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~~~-------~~~~~s~~~s~~~~~~~~~ 623 (1228)
T KOG0055|consen 562 EGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEESLK-------EERSRSLKSSSSSPSLSRG 623 (1228)
T ss_pred CCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccchh-------hhhhhccccccccccccCC
Confidence 9999999999999752 01112221 222111110 00000000 00000000000 0000
Q ss_pred -HHHhhc-CcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhh---ccccCCC
Q 046656 446 -LTDELR-TPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLF---FRANMNK 520 (1326)
Q Consensus 446 -~~~~l~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f---~~~~~~~ 520 (1326)
...... ...+.+...... .......++++.++.+.. +|....-......++-....+.+++.+.++ +..+.+
T Consensus 624 ~~~~~~~~~~~~~e~~~~~~-~~~~~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~- 700 (1228)
T KOG0055|consen 624 SNRSNLLSVKPEGEDPEEPV-SEEDEKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDD- 700 (1228)
T ss_pred cccccccccccccccccccc-ccccccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChH-
Confidence 000000 000000000000 111123445555443322 222211111111122222233344444332 211111
Q ss_pred CccCCcchhhHHHHHHHHHHHH--hhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeec
Q 046656 521 DSVSDGGIYIGAMFFAVIMTTF--NGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYA 598 (1326)
Q Consensus 521 ~~~~~~~~~~g~lff~~~~~~~--~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~ 598 (1326)
..........++|.++....+ +.+......+..-.+-.|-| ..+.+.+++.++.+++-
T Consensus 701 -~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R---------~~~F~~ll~qd~~wFD~---------- 760 (1228)
T KOG0055|consen 701 -ELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLR---------SMMFRALLRQEVGWFDD---------- 760 (1228)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHcCCCcccCC----------
Confidence 011111112222222211111 00000000000000000000 11122233333333221
Q ss_pred cCccccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH------HHHhccccCccchhhHH
Q 046656 599 IGFDPNIGRLFKQLLL-----LLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVF------FAFGGFVLSQDDINNGW 667 (1326)
Q Consensus 599 ~gl~~~~~~ff~~~l~-----~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~------~l~~Gf~i~~~~i~~~~ 667 (1326)
-..+ ++...++.. -.++..-...+...++++...+.+|..+++=+.++. +.++++...
T Consensus 761 --~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~-------- 829 (1228)
T KOG0055|consen 761 --PENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQK-------- 829 (1228)
T ss_pred --Cccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 1122 444444421 111222222333333344444444544444322222 222222110
Q ss_pred HHHHhhCH---HHHHHHHHHHHHhcCCCccccccCCCcchhhHHhhccCc---cc----ccchhHHHHHHHHHHHHH---
Q 046656 668 IWGYWCSP---MMYAQNAIVANEFFGHSWRKFTTNSTESLGVQVLKSRGF---FP----HAFWYWIGLGAMIGFVLL--- 734 (1326)
Q Consensus 668 ~w~~~isp---~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~---~~----~~~~~w~~~~~lig~~~~--- 734 (1326)
.++.-.+. -.|.-.+-+.+|-...- .++.. .+....+++.+.- .+ .....|.+++.-+...++
T Consensus 830 ~~~~~~~~~~~~~~~ea~~iA~eai~NI-rTV~a---l~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~ 905 (1228)
T KOG0055|consen 830 KFLKGFSKDDKKAYEEASKIAIEAVSNI-RTVAA---LCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFV 905 (1228)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhH-HHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00111111111111000 00000 0000001100000 00 011234443333322222
Q ss_pred HHHHHHHHHHhccccC-CCceeeec---c--------------ccccccccccCCcccccccCCCCCCCCCCCccccCCC
Q 046656 735 FNIGFTLSLTFLNQFE-KPQAVILE---E--------------SESNYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQP 796 (1326)
Q Consensus 735 f~i~~~l~l~~l~~~~-~~~~~~~~---~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1326)
+.+.++.+...+.... .+..+... . ++..+.......+...-+. ++.. +..
T Consensus 906 ~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr---~~~i--------~~~ 974 (1228)
T KOG0055|consen 906 YALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDR---KPTI--------DPD 974 (1228)
T ss_pred HHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcC---CCCC--------CCC
Confidence 2233333333222110 00000000 0 0000000000000000000 0000 000
Q ss_pred ccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCe
Q 046656 797 KKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY 876 (1326)
Q Consensus 797 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~ 876 (1326)
.+.+...|...-.++|+||++.||..+ ..+||+|+|++|++|+.+||||||||||||.+.+|-+.+. +
T Consensus 975 ~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p 1042 (1228)
T KOG0055|consen 975 STSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--P 1042 (1228)
T ss_pred CCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--C
Confidence 011111222233699999999998643 4679999999999999999999999999999999998776 5
Q ss_pred eEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHc-------CC
Q 046656 877 ISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELV-------EL 946 (1326)
Q Consensus 877 ~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-------~l 946 (1326)
..|.|.|||++++. ..+|+++|.|.|+|.++. -|++||+.|+. . +.+.+ .+.++++.. +|
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~----eIi~Aak~ANaH~FI~sL 1112 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEE----EIIEAAKLANAHNFISSL 1112 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHH----HHHHHHHHhhhHHHHhcC
Confidence 69999999998865 346789999999999886 59999999971 1 13332 244555544 34
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHH
Q 046656 947 KPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIF 1026 (1326)
Q Consensus 947 ~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1026 (1326)
.+-.|+.+|..|. .||||||||++||||+++||+||||||+||.||+++.+.|+++|.+.. .|||.|+++|++| ..
T Consensus 1113 P~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TI 1188 (1228)
T KOG0055|consen 1113 PQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TI 1188 (1228)
T ss_pred cCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hh
Confidence 5557888887655 699999999999999999999999999999999999999999999965 5899999999987 46
Q ss_pred HHhceeeEEecCcEEEEEcCC
Q 046656 1027 EAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1027 ~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
+.+|.|.++++ |+++..|+.
T Consensus 1189 qnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1189 QNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred hcCCEEEEEEC-CEEEecccH
Confidence 88999999995 799999985
No 13
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3e-71 Score=738.19 Aligned_cols=223 Identities=28% Similarity=0.414 Sum_probs=192.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++. +++.+|+|||+.|++||++||+|+||||||||+++|+|... +.+|+|.++|+++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4788999877631 12569999999999999999999999999999999999887 4589999999886
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+++|+.++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 42 2245679999999999999999999998776653 3344445678899999999998888875 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999995 79999998
Q ss_pred CCCChhhHHHHH
Q 046656 1047 LGSNSSDLISYL 1058 (1326)
Q Consensus 1047 ~~~~~~~~~~~f 1058 (1326)
. +++.+.|
T Consensus 2154 ~----q~Lk~~~ 2161 (2272)
T TIGR01257 2154 I----QHLKSKF 2161 (2272)
T ss_pred H----HHHHHHh
Confidence 6 4554444
No 14
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-73 Score=706.84 Aligned_cols=563 Identities=25% Similarity=0.392 Sum_probs=468.9
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 212 (1326)
+.+++++|+||+|.++||.+|||||+|||||||||++|+|+.... -++|+|.+||++.++...+|.+|||.|+|.|.++
T Consensus 800 qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G-~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 800 QGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGG-YIEGDILISGFPKDQETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccc-eEEeEEEECCeeCchhhhccccceeecccccCcc
Confidence 346788999999999999999999999999999999999997643 6899999999999876778999999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||||.|.|+|.++.+.+ +.. ++..+.+|++++.|+|++++|.+||+..
T Consensus 879 ~TVrESL~fSA~LRlp~~-------v~~------------------------~ek~~yVe~Vi~lleL~~~~daiVG~~G 927 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKE-------VSD------------------------EEKYEYVEEVIELLELKEYADALVGLPG 927 (1391)
T ss_pred cchHHHHHHHHHHcCCCc-------CCH------------------------HHHHHHHHHHHHHhCchhhhhhhccCCC
Confidence 999999999998875422 111 2233568999999999999999999877
Q ss_pred ccCCChhhhHHHHHHHHhhcCC-ccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 293 VRGISGGQKKRLTTGEMMVGPA-LALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~-~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.|||..||||++||-.|+.+| .||||||||||||+.++..|++.+|++++ .|.+++|+||||+.++++.||++++|+
T Consensus 928 -~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLk 1005 (1391)
T KOG0065|consen 928 -SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLK 1005 (1391)
T ss_pred -CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHh
Confidence 999999999999999999999 99999999999999999999999999998 689999999999999999999999996
Q ss_pred -CCeEEEEcCh----hhHHHHHHhcC-CCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhh
Q 046656 372 -DGQIVYQGPC----ELVLDFFESMG-FKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQK 445 (1326)
Q Consensus 372 -~G~iv~~G~~----~~~~~~F~~lG-~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 445 (1326)
+|++||.||. +.+++|||+.| .+||...|||||..|+.+...+.+ ...++++.|+++..+++
T Consensus 1006 rGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~ 1073 (1391)
T KOG0065|consen 1006 RGGQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKR 1073 (1391)
T ss_pred cCCeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHH
Confidence 6899999986 44667999987 999999999999999987643321 12378899999988877
Q ss_pred HHHhhc---CcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCc
Q 046656 446 LTDELR---TPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDS 522 (1326)
Q Consensus 446 ~~~~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~ 522 (1326)
..++++ .+... ..........|..|++.|++.|++|++...||++.....|++..++.++++|..||+.+.+
T Consensus 1074 ~~e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~~--- 1148 (1391)
T KOG0065|consen 1074 NKELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGHN--- 1148 (1391)
T ss_pred HHHHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCCc---
Confidence 766543 33332 1223334556899999999999999999999999999999999999999999999999843
Q ss_pred cCCcchhhHHHHHHHHHHHHhhhH-HHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCc
Q 046656 523 VSDGGIYIGAMFFAVIMTTFNGMS-DISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGF 601 (1326)
Q Consensus 523 ~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl 601 (1326)
.++.++.+|++|.++++...+-.. .....-.++-+++|||..+.|+..+|.++..++++|+.++.+++|.+++|+++||
T Consensus 1149 ~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF 1228 (1391)
T KOG0065|consen 1149 VQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGF 1228 (1391)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccc
Confidence 455566788888777665443322 3334445788999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHH
Q 046656 602 DPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQN 681 (1326)
Q Consensus 602 ~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~ 681 (1326)
..++.+++.+++..++.......++.++.+++|+..+|..+.++++.++.+|+|++++++.||.||+|+||+||+.|..+
T Consensus 1229 ~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~ 1308 (1391)
T KOG0065|consen 1229 YWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLE 1308 (1391)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccC-------CCcchhhHHhhccC----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 046656 682 AIVANEFFGHSWRKFTTN-------STESLGVQVLKSRG----FFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQ 748 (1326)
Q Consensus 682 al~~nef~~~~~~~~~~~-------~~~~~g~~~L~~~~----~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~ 748 (1326)
+++...+.+..-.|...+ ...+.|......++ +..+... ....+.+++.+.+..++.+..+|.+.
T Consensus 1309 gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~~~ 1384 (1391)
T KOG0065|consen 1309 GLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYLNF 1384 (1391)
T ss_pred HHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHHHH
Confidence 999999987766554322 22344544443344 3222110 00112233455556666666666543
No 15
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5e-70 Score=732.79 Aligned_cols=559 Identities=26% Similarity=0.374 Sum_probs=455.8
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCH
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTV 215 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 215 (1326)
++++|+|||+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.+|||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 4679999999999999999999999999999999999987422237999999998753 346789999999999999999
Q ss_pred HHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccC
Q 046656 216 RETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRG 295 (1326)
Q Consensus 216 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 295 (1326)
+||+.|+++++.+.. ..+ .+....++++++.+||++++|+.+|+.. .+
T Consensus 854 ~E~L~~~a~l~~~~~-------~~~------------------------~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKS-------VSK------------------------SEKMEYVEEVIKLLEMESYADAVVGVPG-EG 901 (1394)
T ss_pred HHHHHHHHHhCCCCC-------CCH------------------------HHHHHHHHHHHHHcCChhhCCCeeCCCC-CC
Confidence 999999887653211 000 1122346889999999999999999643 48
Q ss_pred CChhhhHHHHHHHHhhcCCc-cceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC-
Q 046656 296 ISGGQKKRLTTGEMMVGPAL-ALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG- 373 (1326)
Q Consensus 296 LSGGqkqRvsia~al~~~~~-illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G- 373 (1326)
|||||||||+||++|+.+|+ +|||||||+|||+.++..+++.|+++++ .+.|+|+++||+...+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999875 46788888888887788999999999987
Q ss_pred eEEEEcCh----hhHHHHHHhcCC-CCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHH
Q 046656 374 QIVYQGPC----ELVLDFFESMGF-KCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTD 448 (1326)
Q Consensus 374 ~iv~~G~~----~~~~~~F~~lG~-~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 448 (1326)
+++|+|+. +++.+||++.|+ +||+..|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 01234555665554444333
Q ss_pred hhc---CcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCC
Q 046656 449 ELR---TPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSD 525 (1326)
Q Consensus 449 ~l~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~ 525 (1326)
+++ .+...............|..+++.|++.+++|.++..+|++.....|+++.+++|+++|++||+.+.+. .+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~---~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSL---QG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCH---HH
Confidence 221 111111000011122468899999999999999999999999999999999999999999999987543 34
Q ss_pred cchhhHHHHHHHHHHHHhhhHHHHHHhhcchh-hHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCcccc
Q 046656 526 GGIYIGAMFFAVIMTTFNGMSDISMTVAKLPI-FYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPN 604 (1326)
Q Consensus 526 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~v-f~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~ 604 (1326)
.+.+.|++|+.+++..+.....++..+.++++ ++|||..++|+.++|++++.+.++|+.++.+++|.+++|||+||.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 56678888887766554433444455566666 48999999999999999999999999999999999999999999887
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHH
Q 046656 605 IGR-------LFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMM 677 (1326)
Q Consensus 605 ~~~-------ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ 677 (1326)
+.. |+.++++.++...++.+++.++++++++..+|..++++++.++++|+||+++.++||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 755 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcccccc-------------------------------CC---C----cchhhHHhhccCcccccc
Q 046656 678 YAQNAIVANEFFGHSWRKFTT-------------------------------NS---T----ESLGVQVLKSRGFFPHAF 719 (1326)
Q Consensus 678 y~~~al~~nef~~~~~~~~~~-------------------------------~~---~----~~~g~~~L~~~~~~~~~~ 719 (1326)
|++++++.|||.+....|... +. + ...|.++|..+++...
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~-- 1363 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYS-- 1363 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCccc--
Confidence 999999999999887655321 00 0 2367788887776544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 046656 720 WYWIGLGAMIGFVLLFNIGFTLSLTFL 746 (1326)
Q Consensus 720 ~~w~~~~~lig~~~~f~i~~~l~l~~l 746 (1326)
..|.++++++++++++ ++.++.+.|.
T Consensus 1364 ~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1364 GRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred ccccchhhhhHHHHHH-HHHHHhhheE
Confidence 3599999999998888 5556666654
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.5e-68 Score=718.29 Aligned_cols=211 Identities=22% Similarity=0.309 Sum_probs=178.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+++|+. +.+++|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 6999999998841 22369999999999999999999999999999999999877 4689999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+|+.++||||++.++.. |+||||.+.. ..+ ++.++++++..++.+. .|+.+|..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 64 4567889999999998865 9999997531 112 3457888888887643 34555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999975 4899999999986 4567999999995
Q ss_pred cEEEEEcCCC
Q 046656 1039 GQEIYVGPLG 1048 (1326)
Q Consensus 1039 g~~~~~G~~~ 1048 (1326)
|+++..|+..
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 7999999863
No 17
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-66 Score=612.28 Aligned_cols=474 Identities=27% Similarity=0.356 Sum_probs=364.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC-CceeeEEEECCccCCCCCc-------cceEEEEccCC-
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS-LKVSGRVTYNGHDMNEFVP-------QRTAAYISQHD- 207 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 207 (1326)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 3468999999987644332 26799999994
Q ss_pred -CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 208 -VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 208 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
.+-|-+||.+.+.=..+.++... ..+....+.++|+.+||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 45566899888876554443211 12234456788999999987654
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
+.+++.|||||||||.||+||+.+|++|++||||++||+.++.+|++.|+++.+. .++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 6789999999999999999999999999999999999999999999999999764 578888899999999999999
Q ss_pred EEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhH
Q 046656 367 IILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKL 446 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 446 (1326)
|+||.+|++++.|+++++.. .|.+ ||. +.+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~--------~p~h-------------------------pYT-----------------~~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILS--------NPQH-------------------------PYT-----------------RGL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHh--------ccCC-------------------------ccc-----------------HHH
Confidence 99999999999999998853 1111 110 000
Q ss_pred HHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCc
Q 046656 447 TDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDG 526 (1326)
Q Consensus 447 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 526 (1326)
.+
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHH
Q 046656 527 GIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIG 606 (1326)
Q Consensus 527 ~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 606 (1326)
..|.....+
T Consensus 257 ---------------------------a~p~~~~~~-------------------------------------------- 265 (539)
T COG1123 257 ---------------------------AVPRLGDEK-------------------------------------------- 265 (539)
T ss_pred ---------------------------hCCCccccc--------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHH
Q 046656 607 RLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVAN 686 (1326)
Q Consensus 607 ~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~n 686 (1326)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccc
Q 046656 687 EFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLD 766 (1326)
Q Consensus 687 ef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 766 (1326)
.
T Consensus 266 --------~----------------------------------------------------------------------- 266 (539)
T COG1123 266 --------I----------------------------------------------------------------------- 266 (539)
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred cccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEe
Q 046656 767 NRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFR 846 (1326)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~ 846 (1326)
. .. . ... + .+ ...-++++|++..+..+..+. +...+...+++||||+++
T Consensus 267 -----~-~~-------~--------~~~-~------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~ 315 (539)
T COG1123 267 -----I-RL-------P--------RRG-P------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLR 315 (539)
T ss_pred -----c-cc-------c--------ccc-c------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEec
Confidence 0 00 0 000 0 00 011345666655554322110 000134579999999999
Q ss_pred CCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC--C---cccccceEEEeecCC--CCCCCCCHHHHHHHH
Q 046656 847 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK--K---QETFTRISGYCEQND--IHSPLVTVYESLLYS 919 (1326)
Q Consensus 847 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~ 919 (1326)
+||++||+|+||||||||.++|+|+.++ .+|.|.++|.+. + ....++.+-+++|++ .+.|.+||++.+.-.
T Consensus 316 ~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~ep 393 (539)
T COG1123 316 EGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEP 393 (539)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhH
Confidence 9999999999999999999999999874 689999999762 1 123455677888876 567999999999876
Q ss_pred HHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 046656 920 AWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 998 (1326)
Q Consensus 920 ~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~ 998 (1326)
...... ....++++++.++++.++|.+ +.++.. .+||||||||++|||||+.+|++|++|||||.||+..+.
T Consensus 394 L~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ryP-----~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa 466 (539)
T COG1123 394 LRIHGG--GSGAERRARVAELLELVGLPPEFLDRYP-----HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQA 466 (539)
T ss_pred Hhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcCc-----hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHH
Confidence 543322 224566678999999999986 455554 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 999 IVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 999 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
.|.++|+++.++ |.|.|++|||.+ -+.+.||||++|.+ |++|..||.
T Consensus 467 ~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 467 QVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999865 999999999986 46778999999995 799999974
No 18
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.4e-67 Score=714.34 Aligned_cols=210 Identities=21% Similarity=0.291 Sum_probs=177.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+++|+. +.+++|+|+|++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5899999998841 22469999999999999999999999999999999999887 4689999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
.+ ..+|+.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 54 4567889999999998874 9999996531 122 3447888888888654 34555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 4899999999985 4567999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 799999986
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.4e-66 Score=704.13 Aligned_cols=210 Identities=18% Similarity=0.227 Sum_probs=178.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 6999999998852 12359999999999999999999999999999999999877 4689999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+|+.++||||++.++.. |+||||.... +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 64 3567889999999999875 9999995211 122 3447888888888654 35555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 4899999999975 4667899999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 799999986
No 20
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-65 Score=629.76 Aligned_cols=464 Identities=20% Similarity=0.287 Sum_probs=352.1
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|.++..... ++.++||+|++.+
T Consensus 15 ~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (506)
T PRK13549 15 FGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELAL 93 (506)
T ss_pred eCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEecccc
Confidence 34457999999999999999999999999999999999999861 128999999998754332 3569999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.|+......+. .+ . .+....++++++.+||++..+..
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~-~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 140 (506)
T PRK13549 94 VKELSVLENIFLGNEITPGGI-MD------Y------------------------DAMYLRAQKLLAQLKLDINPATP-- 140 (506)
T ss_pred CCCCcHHHHhhhcccccccCC-cC------H------------------------HHHHHHHHHHHHHcCCCCCcccc--
Confidence 999999999998653211000 00 0 00112356789999998766644
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.++||+|++
T Consensus 141 ---~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvi~~tH~~~~~~~~~d~v~~ 215 (506)
T PRK13549 141 ---VGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA--HGIACIYISHKLNEVKAISDTICV 215 (506)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHHhcCEEEE
Confidence 457999999999999999999999999999999999999999999999854 355677789999999999999999
Q ss_pred ecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHh
Q 046656 370 LSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDE 449 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 449 (1326)
|++|++++.|+.+++.. .+..+.+
T Consensus 216 l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------------ 239 (506)
T PRK13549 216 IRDGRHIGTRPAAGMTE--------------------------------------------DDIITMM------------ 239 (506)
T ss_pred EECCEEeeecccccCCH--------------------------------------------HHHHHHh------------
Confidence 99999998886542200 0000000
Q ss_pred hcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchh
Q 046656 450 LRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIY 529 (1326)
Q Consensus 450 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 529 (1326)
. +
T Consensus 240 ----------------------------------------------------------------~--~------------ 241 (506)
T PRK13549 240 ----------------------------------------------------------------V--G------------ 241 (506)
T ss_pred ----------------------------------------------------------------h--C------------
Confidence 0 0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHH
Q 046656 530 IGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLF 609 (1326)
Q Consensus 530 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 609 (1326)
.+
T Consensus 242 -------------------------~~----------------------------------------------------- 243 (506)
T PRK13549 242 -------------------------RE----------------------------------------------------- 243 (506)
T ss_pred -------------------------cC-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhc
Q 046656 610 KQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFF 689 (1326)
Q Consensus 610 ~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~ 689 (1326)
.+.
T Consensus 244 -----------------------------------------------------~~~------------------------ 246 (506)
T PRK13549 244 -----------------------------------------------------LTA------------------------ 246 (506)
T ss_pred -----------------------------------------------------ccc------------------------
Confidence 000
Q ss_pred CCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccccccccccc
Q 046656 690 GHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRI 769 (1326)
Q Consensus 690 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 769 (1326)
. .
T Consensus 247 -------------------------------------------------------~---~-------------------- 248 (506)
T PRK13549 247 -------------------------------------------------------L---Y-------------------- 248 (506)
T ss_pred -------------------------------------------------------c---c--------------------
Confidence 0 0
Q ss_pred CCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCe
Q 046656 770 GGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGV 849 (1326)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge 849 (1326)
. .. .. ... ...++++|+++.++.. +++.+|+|+||+|++||
T Consensus 249 ----~--------~~--------~~-~~~--------~~~l~~~~l~~~~~~~----------~~~~vl~~vsl~i~~Ge 289 (506)
T PRK13549 249 ----P--------RE--------PH-TIG--------EVILEVRNLTAWDPVN----------PHIKRVDDVSFSLRRGE 289 (506)
T ss_pred ----c--------cc--------cc-CCC--------CceEEEecCccccccc----------cccccccceeeEEcCCc
Confidence 0 00 00 000 0136677777655210 12359999999999999
Q ss_pred EEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHHHHh
Q 046656 850 LTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQND---IHSPLVTVYESLLYSAWL 922 (1326)
Q Consensus 850 ~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~~~l 922 (1326)
++||+|+||||||||+++|+|..++ +.+|+|.++|.++... ..++.+||++|+. .+++.+||.||+.+....
T Consensus 290 ~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~ 368 (506)
T PRK13549 290 ILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALD 368 (506)
T ss_pred EEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhh
Confidence 9999999999999999999998752 2589999999875321 1234689999985 467789999999875321
Q ss_pred hccC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 046656 923 RLRT--EVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 999 (1326)
Q Consensus 923 r~~~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~ 999 (1326)
.... ..+....++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|++|||||||+|||+.++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~ 443 (506)
T PRK13549 369 RFTGGSRIDDAAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYE 443 (506)
T ss_pred hhccCcccChHHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHH
Confidence 1110 012333445689999999996 56677664 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCC
Q 046656 1000 VMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSN 1050 (1326)
Q Consensus 1000 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~ 1050 (1326)
+++.|++++++|+|||++|||++ ++.+.||++++|++ |+++..|+..+.
T Consensus 444 l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 444 IYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred HHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 99999999888999999999986 67788999999986 789999987543
No 21
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-65 Score=683.10 Aligned_cols=216 Identities=19% Similarity=0.319 Sum_probs=179.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-------------
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------- 875 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------------- 875 (1326)
.++|+||+|+|+.. ++.++|+|+||+|+||+++||+|+||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 69999999998531 1246999999999999999999999999999999999987641
Q ss_pred ---------------------------------------eeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHH
Q 046656 876 ---------------------------------------YISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVTVY 913 (1326)
Q Consensus 876 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~ 913 (1326)
+.+|+|++||.++.. ..+++.+|||+|++.++. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998754 457889999999998874 7999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 046656 914 ESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-------LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 986 (1326)
Q Consensus 914 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 986 (1326)
|||.|+. .+.+. +.++++++..++.+ -.|+.+|..| ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 12222 34677777777654 3467777543 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHHhceeeEEecC---cE-EEEEcCC
Q 046656 987 EPTSGLDARAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGPL 1047 (1326)
Q Consensus 987 EPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g---g~-~~~~G~~ 1047 (1326)
||||+||+++++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 35899999999975 56789999999973 66 5578885
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.1e-64 Score=625.99 Aligned_cols=454 Identities=20% Similarity=0.311 Sum_probs=348.8
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 14 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (501)
T PRK10762 14 FPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNL 90 (501)
T ss_pred eCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhc
Confidence 33457999999999999999999999999999999999999987 9999999988753221 3469999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.|+..........+ . .+....++++++.+||++..+..
T Consensus 91 ~~~~tv~e~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 138 (501)
T PRK10762 91 IPQLTIAENIFLGREFVNRFGRID------W------------------------KKMYAEADKLLARLNLRFSSDKL-- 138 (501)
T ss_pred cCCCcHHHHhhhccccccccCccC------H------------------------HHHHHHHHHHHHHcCCCCCccCc--
Confidence 999999999998643211000000 0 00112356779999998766644
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.++||+|++
T Consensus 139 ---~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~ 213 (501)
T PRK10762 139 ---VGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTV 213 (501)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 456999999999999999999999999999999999999999999999854 3 55677789999999999999999
Q ss_pred ecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHh
Q 046656 370 LSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDE 449 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 449 (1326)
|++|+++..|+.+++.. ++..+.+
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------------ 237 (501)
T PRK10762 214 FRDGQFIAEREVADLTE--------------------------------------------DSLIEMM------------ 237 (501)
T ss_pred EeCCEEEEecCcCcCCH--------------------------------------------HHHHHHh------------
Confidence 99999998776542200 0000000
Q ss_pred hcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchh
Q 046656 450 LRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIY 529 (1326)
Q Consensus 450 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 529 (1326)
+
T Consensus 238 ----------------------------------------------------------------~--------------- 238 (501)
T PRK10762 238 ----------------------------------------------------------------V--------------- 238 (501)
T ss_pred ----------------------------------------------------------------c---------------
Confidence 0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHH
Q 046656 530 IGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLF 609 (1326)
Q Consensus 530 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 609 (1326)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK10762 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhc
Q 046656 610 KQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFF 689 (1326)
Q Consensus 610 ~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~ 689 (1326)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK10762 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccccccccccc
Q 046656 690 GHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRI 769 (1326)
Q Consensus 690 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 769 (1326)
+.....
T Consensus 239 ~~~~~~-------------------------------------------------------------------------- 244 (501)
T PRK10762 239 GRKLED-------------------------------------------------------------------------- 244 (501)
T ss_pred CCCccc--------------------------------------------------------------------------
Confidence 000000
Q ss_pred CCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCe
Q 046656 770 GGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGV 849 (1326)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge 849 (1326)
. . .. . .. +. .+..++++|++. .+|+|+||+|++||
T Consensus 245 -~--~--------~~-----~--~~-~~--------~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge 279 (501)
T PRK10762 245 -Q--Y--------PR-----L--DK-AP--------GEVRLKVDNLSG------------------PGVNDVSFTLRKGE 279 (501)
T ss_pred -c--c--------cc-----c--cc-CC--------CCcEEEEeCccc------------------CCcccceEEEcCCc
Confidence 0 0 00 0 00 00 011356677652 26999999999999
Q ss_pred EEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHHHHh
Q 046656 850 LTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQND---IHSPLVTVYESLLYSAWL 922 (1326)
Q Consensus 850 ~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~~~l 922 (1326)
+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++ .+++.+||.|++.+....
T Consensus 280 ~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~ 357 (501)
T PRK10762 280 ILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALR 357 (501)
T ss_pred EEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhh
Confidence 999999999999999999999876 4589999999876421 1345689999995 467889999999875321
Q ss_pred hcc---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 046656 923 RLR---TEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 998 (1326)
Q Consensus 923 r~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~ 998 (1326)
... ........++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|++|||||||+|||+.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~ 432 (501)
T PRK10762 358 YFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKK 432 (501)
T ss_pred hhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHH
Confidence 110 0122233345688999999995 56777664 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCC
Q 046656 999 IVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSN 1050 (1326)
Q Consensus 999 ~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~ 1050 (1326)
.+.+.|++++++|+|||++||++. ++.+.||++++|++ |++++.|+..+.
T Consensus 433 ~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 482 (501)
T PRK10762 433 EIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQA 482 (501)
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccccC
Confidence 999999999878999999999986 67788999999985 789999987543
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-65 Score=629.30 Aligned_cols=461 Identities=21% Similarity=0.276 Sum_probs=349.5
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++.+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+
T Consensus 15 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~ 91 (510)
T PRK09700 15 FGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSV 91 (510)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccc
Confidence 34457999999999999999999999999999999999999887 9999999988765432 2469999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++..... ..+.. .... ..+....++.+++.+||++..+..
T Consensus 92 ~~~~tv~e~l~~~~~~~~--~~~~~-~~~~------------------------~~~~~~~~~~~l~~~gl~~~~~~~-- 142 (510)
T PRK09700 92 IDELTVLENLYIGRHLTK--KVCGV-NIID------------------------WREMRVRAAMMLLRVGLKVDLDEK-- 142 (510)
T ss_pred cCCCcHHHHhhhcccccc--ccccc-cccC------------------------HHHHHHHHHHHHHHcCCCCCcccc--
Confidence 999999999987542100 00000 0000 001122356789999998766644
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++
T Consensus 143 ---~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~ 217 (510)
T PRK09700 143 ---VANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTV 217 (510)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 457999999999999999999999999999999999999999999999865 3 55677789999999999999999
Q ss_pred ecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHh
Q 046656 370 LSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDE 449 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 449 (1326)
|++|++++.|+++++.. . +..+.
T Consensus 218 l~~G~i~~~g~~~~~~~---------------~-----------------------------~~~~~------------- 240 (510)
T PRK09700 218 MKDGSSVCSGMVSDVSN---------------D-----------------------------DIVRL------------- 240 (510)
T ss_pred EECCEEeeecchhhCCH---------------H-----------------------------HHHHH-------------
Confidence 99999999887653310 0 00000
Q ss_pred hcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchh
Q 046656 450 LRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIY 529 (1326)
Q Consensus 450 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 529 (1326)
. . +... .
T Consensus 241 ~---------------------------------------------------------------~--~~~~---~----- 247 (510)
T PRK09700 241 M---------------------------------------------------------------V--GREL---Q----- 247 (510)
T ss_pred h---------------------------------------------------------------c--CCCc---c-----
Confidence 0 0 0000 0
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHH
Q 046656 530 IGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLF 609 (1326)
Q Consensus 530 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 609 (1326)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhc
Q 046656 610 KQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFF 689 (1326)
Q Consensus 610 ~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~ 689 (1326)
+
T Consensus 248 -------------------------------------------------~------------------------------ 248 (510)
T PRK09700 248 -------------------------------------------------N------------------------------ 248 (510)
T ss_pred -------------------------------------------------c------------------------------
Confidence 0
Q ss_pred CCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccccccccccc
Q 046656 690 GHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRI 769 (1326)
Q Consensus 690 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 769 (1326)
.. . .
T Consensus 249 --~~---~-------------------~---------------------------------------------------- 252 (510)
T PRK09700 249 --RF---N-------------------A---------------------------------------------------- 252 (510)
T ss_pred --cc---c-------------------c----------------------------------------------------
Confidence 00 0 0
Q ss_pred CCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCe
Q 046656 770 GGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGV 849 (1326)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge 849 (1326)
. . . . ... .. .+..++++|+++.+ ..+|+|+||+|++||
T Consensus 253 --~-~--------~---~----~~~-~~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge 290 (510)
T PRK09700 253 --M-K--------E---N----VSN-LA--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGE 290 (510)
T ss_pred --c-c--------c---c----ccc-CC--------CCcEEEEeCccccC---------------CCcccceeEEEcCCc
Confidence 0 0 0 0 000 00 01136778877532 128999999999999
Q ss_pred EEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecC---CCCCCCCCHHHHHHHHHHh
Q 046656 850 LTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQN---DIHSPLVTVYESLLYSAWL 922 (1326)
Q Consensus 850 ~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~~Tv~E~l~f~~~l 922 (1326)
+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+ ..+++.+||+|++.+....
T Consensus 291 ~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~ 368 (510)
T PRK09700 291 ILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSL 368 (510)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccc
Confidence 999999999999999999999876 4589999999875321 224568999998 4577889999999875321
Q ss_pred h---ccC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 046656 923 R---LRT--E-VDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 995 (1326)
Q Consensus 923 r---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~ 995 (1326)
+ ... . ......++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|+||||||||+|||+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~ 443 (510)
T PRK09700 369 KDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVG 443 (510)
T ss_pred ccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHH
Confidence 1 000 1 11222335678999999996 67777764 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 996 AAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 996 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |+++..++.
T Consensus 444 ~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 444 AKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999878999999999986 67788999999986 688888865
No 24
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.2e-64 Score=680.25 Aligned_cols=210 Identities=24% Similarity=0.279 Sum_probs=178.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.|+|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 6999999998842 22459999999999999999999999999999999999887 4689999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
.. ..+++.+|||||++.++.. |++|||... .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~- 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG- 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC-
Confidence 54 4578899999999988864 999999531 1222 3458899999988754 35556653
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~-p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
+.+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMDH 1519 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEEC
Confidence 457999999999999999996 89999999999999999999999999865 4799999999975 5678999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 1520 -G~VvE~Gt~ 1528 (1560)
T PTZ00243 1520 -GAVAEMGSP 1528 (1560)
T ss_pred -CEEEEECCH
Confidence 799999986
No 25
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.1e-64 Score=679.79 Aligned_cols=209 Identities=20% Similarity=0.261 Sum_probs=177.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 6999999998852 23469999999999999999999999999999999999874 489999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
.. ..+++.++||||++.+++. |+||||.... .. .++.++++++.++|.+. .|+.+|. +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 64 3467889999999999874 9999994311 11 23458899999988653 3555554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||+||||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999875 4799999999975 5567999999986
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 799999985
No 26
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-64 Score=631.24 Aligned_cols=490 Identities=20% Similarity=0.226 Sum_probs=354.0
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCC----------CCC------c-cce
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMN----------EFV------P-QRT 199 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 199 (1326)
.++|+|||+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|..++ ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999986431 111 1 136
Q ss_pred EEEEccCC--CCCCCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHH
Q 046656 200 AAYISQHD--VHIGEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLK 276 (1326)
Q Consensus 200 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (1326)
+|||+|++ .+++.+||+||+.++.+.. +.. + .+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------R------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 99999987 5788899999999976532 110 0 011234567899
Q ss_pred HcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecC
Q 046656 277 VLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQP 356 (1326)
Q Consensus 277 ~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~ 356 (1326)
.+||.+..+ .-+..+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.++++.+. .+++|+.++|+
T Consensus 152 ~~gL~~~~~--~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~-~g~tvi~itHd 228 (623)
T PRK10261 152 QVRIPEAQT--ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKE-MSMGVIFITHD 228 (623)
T ss_pred HCCCCChhh--HHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHh-cCCEEEEEcCC
Confidence 999964210 113456789999999999999999999999999999999999999999999998653 35567779999
Q ss_pred hhhHHhhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHH
Q 046656 357 APETYDLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEA 436 (1326)
Q Consensus 357 ~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~ 436 (1326)
..++.++||+|++|++|++++.|+++++.. .|.+....+++
T Consensus 229 l~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~------------------------------- 269 (623)
T PRK10261 229 MGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALL------------------------------- 269 (623)
T ss_pred HHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhh-------------------------------
Confidence 999999999999999999999998876521 01000000000
Q ss_pred HHhchhhhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccc
Q 046656 437 FQSFHVGQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRA 516 (1326)
Q Consensus 437 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~ 516 (1326)
... + +.
T Consensus 270 -----------~~~--~-------------------------------------------------------------~~ 275 (623)
T PRK10261 270 -----------AAV--P-------------------------------------------------------------QL 275 (623)
T ss_pred -----------hcc--C-------------------------------------------------------------cc
Confidence 000 0 00
Q ss_pred cCCCCccCCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeee
Q 046656 517 NMNKDSVSDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTY 596 (1326)
Q Consensus 517 ~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y 596 (1326)
. . .... .. |
T Consensus 276 ~--~--~~~~---------------------------~~--------------------------~-------------- 284 (623)
T PRK10261 276 G--A--MKGL---------------------------DY--------------------------P-------------- 284 (623)
T ss_pred c--c--cccc---------------------------cC--------------------------C--------------
Confidence 0 0 0000 00 0
Q ss_pred eccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHH
Q 046656 597 YAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPM 676 (1326)
Q Consensus 597 ~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~ 676 (1326)
...+.
T Consensus 285 ----------------------------------------------------------------~~~~~----------- 289 (623)
T PRK10261 285 ----------------------------------------------------------------RRFPL----------- 289 (623)
T ss_pred ----------------------------------------------------------------ccccc-----------
Confidence 00000
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceee
Q 046656 677 MYAQNAIVANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVI 756 (1326)
Q Consensus 677 ~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~ 756 (1326)
. ..
T Consensus 290 -------------------~--------------------------------------------------------~~-- 292 (623)
T PRK10261 290 -------------------I--------------------------------------------------------SL-- 292 (623)
T ss_pred -------------------c--------------------------------------------------------cc--
Confidence 0 00
Q ss_pred eccccccccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceE
Q 046656 757 LEESESNYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLV 836 (1326)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 836 (1326)
.. . .. ..... .. . .. +....-++++|+++.++..... ... ....+.
T Consensus 293 -~~----------~---~~-------~~~~~---~~-~-~~------~~~~~~L~~~~l~~~y~~~~~~-~~~-~~~~~~ 338 (623)
T PRK10261 293 -EH----------P---AK-------QEPPI---EQ-D-TV------VDGEPILQVRNLVTRFPLRSGL-LNR-VTREVH 338 (623)
T ss_pred -cc----------c---cc-------cCccc---cc-c-cc------cCCCceEEEeeeEEEEcCCCcc-ccc-cCCceE
Confidence 00 0 00 00000 00 0 00 0001147888988776421000 000 001246
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCC--CCCC
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------TFTRISGYCEQND--IHSP 908 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~ 908 (1326)
+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++ .+++
T Consensus 339 ~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~ 416 (623)
T PRK10261 339 AVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDP 416 (623)
T ss_pred EEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCC
Confidence 9999999999999999999999999999999999876 4589999999876321 2356799999996 5788
Q ss_pred CCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 046656 909 LVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 987 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 987 (1326)
.+||.|++.+...... ....++.++++.++|+.++|. +..++.++ .|||||||||+|||||+.+|+||||||
T Consensus 417 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~-----~LSgGqrQRv~iAraL~~~p~llllDE 489 (623)
T PRK10261 417 RQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYPH-----EFSGGQRQRICIARALALNPKVIIADE 489 (623)
T ss_pred CCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 8999999987643321 112334456789999999996 56666653 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 988 PTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 988 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||+|||+.++..++++|++++++ |.|||++|||++ .+.+.+|++++|++ |++++.|+.
T Consensus 490 Pts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 490 AVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999765 899999999986 57788999999986 799999975
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.7e-64 Score=619.97 Aligned_cols=457 Identities=20% Similarity=0.268 Sum_probs=346.6
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 21 ~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (510)
T PRK15439 21 YSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLL 97 (510)
T ss_pred eCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCcc
Confidence 34456999999999999999999999999999999999999987 9999999988754322 2459999999989
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.|+.... . +....++++++.+||++..+..
T Consensus 98 ~~~~tv~e~l~~~~~~~-------------~-------------------------~~~~~~~~~l~~~~l~~~~~~~-- 137 (510)
T PRK15439 98 FPNLSVKENILFGLPKR-------------Q-------------------------ASMQKMKQLLAALGCQLDLDSS-- 137 (510)
T ss_pred CCCCcHHHHhhcccccc-------------h-------------------------HHHHHHHHHHHHcCCCccccCC--
Confidence 99999999998853210 0 0012346678999998766644
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ . +.+|+.++|+..++.++||+|++
T Consensus 138 ---~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~ 212 (510)
T PRK15439 138 ---AGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISV 212 (510)
T ss_pred ---hhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 457999999999999999999999999999999999999999999999865 3 56677789999999999999999
Q ss_pred ecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHh
Q 046656 370 LSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDE 449 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 449 (1326)
|++|++++.|+++++... +.+ +.+..
T Consensus 213 l~~G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~---------- 238 (510)
T PRK15439 213 MRDGTIALSGKTADLSTD---------------DII-----------------------------QAITP---------- 238 (510)
T ss_pred EECCEEEEecChHHcCHH---------------HHH-----------------------------HHHhC----------
Confidence 999999999887654210 000 00000
Q ss_pred hcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchh
Q 046656 450 LRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIY 529 (1326)
Q Consensus 450 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 529 (1326)
. ..... ...
T Consensus 239 -------~-----------------------------------------------------------~~~~~-~~~---- 247 (510)
T PRK15439 239 -------A-----------------------------------------------------------AREKS-LSA---- 247 (510)
T ss_pred -------c-----------------------------------------------------------ccccc-ccc----
Confidence 0 00000 000
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHH
Q 046656 530 IGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLF 609 (1326)
Q Consensus 530 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 609 (1326)
.
T Consensus 248 -------------------------~------------------------------------------------------ 248 (510)
T PRK15439 248 -------------------------S------------------------------------------------------ 248 (510)
T ss_pred -------------------------c------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhc
Q 046656 610 KQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFF 689 (1326)
Q Consensus 610 ~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~ 689 (1326)
..
T Consensus 249 ------------------------------------------------------~~------------------------ 250 (510)
T PRK15439 249 ------------------------------------------------------QK------------------------ 250 (510)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred CCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccccccccccc
Q 046656 690 GHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRI 769 (1326)
Q Consensus 690 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 769 (1326)
.. ..+
T Consensus 251 ---~~-----------------~~~------------------------------------------------------- 255 (510)
T PRK15439 251 ---LW-----------------LEL------------------------------------------------------- 255 (510)
T ss_pred ---cc-----------------ccc-------------------------------------------------------
Confidence 00 000
Q ss_pred CCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCe
Q 046656 770 GGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGV 849 (1326)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge 849 (1326)
. .. ....+. .+.-++++|++. .+|+|||++|++||
T Consensus 256 ----~--------~~-------~~~~~~--------~~~~l~~~~l~~------------------~~l~~isl~i~~Ge 290 (510)
T PRK15439 256 ----P--------GN-------RRQQAA--------GAPVLTVEDLTG------------------EGFRNISLEVRAGE 290 (510)
T ss_pred ----c--------cc-------ccccCC--------CCceEEEeCCCC------------------CCccceeEEEcCCc
Confidence 0 00 000000 011366777752 15899999999999
Q ss_pred EEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHHHHh
Q 046656 850 LTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQND---IHSPLVTVYESLLYSAWL 922 (1326)
Q Consensus 850 ~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~~~l 922 (1326)
++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.|++......
T Consensus 291 ~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~ 368 (510)
T PRK15439 291 ILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHN 368 (510)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhh
Confidence 999999999999999999999876 4589999999876431 1234689999984 477888999998642111
Q ss_pred hccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHH
Q 046656 923 RLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1001 (1326)
Q Consensus 923 r~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~ 1001 (1326)
+..........++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|+||||||||+|||+.++..++
T Consensus 369 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~ 443 (510)
T PRK15439 369 RRGFWIKPARENAVLERYRRALNIKFNHAEQAAR-----TLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIY 443 (510)
T ss_pred hhccccChHHHHHHHHHHHHHcCCCCCCccCccc-----cCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHH
Confidence 1110011222335688999999997 66777764 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCC
Q 046656 1002 RTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGS 1049 (1326)
Q Consensus 1002 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~ 1049 (1326)
+.|++++++|.|||++|||++ ++.+.||++++|++ |++++.|..++
T Consensus 444 ~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 444 QLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred HHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 999999878999999999987 67788999999985 79999887654
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-63 Score=617.68 Aligned_cols=465 Identities=20% Similarity=0.272 Sum_probs=348.8
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDV 208 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~ 208 (1326)
+++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|. ..+|+|.++|.++..... ++.++||+|++.
T Consensus 10 ~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 88 (500)
T TIGR02633 10 TFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELT 88 (500)
T ss_pred EeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccc
Confidence 334457999999999999999999999999999999999998761 128999999988764332 246999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++.+||+||+.++......+...+ . .+....++++++.+||++..+
T Consensus 89 ~~~~~tv~~~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~--- 135 (500)
T TIGR02633 89 LVPELSVAENIFLGNEITLPGGRMA------Y------------------------NAMYLRAKNLLRELQLDADNV--- 135 (500)
T ss_pred cCCCCcHHHHHHhhccccccccccC------H------------------------HHHHHHHHHHHHHcCCCCCcc---
Confidence 8999999999998643210000000 0 001123567899999976542
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. .+++|+.++|+..++.++||+|+
T Consensus 136 -~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~~~~~~d~i~ 212 (500)
T TIGR02633 136 -TRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNEVKAVCDTIC 212 (500)
T ss_pred -cCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHHHHHhCCEEE
Confidence 133557999999999999999999999999999999999999999999999864 35667778999999999999999
Q ss_pred EecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHH
Q 046656 369 LLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTD 448 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 448 (1326)
+|++|++++.|+.+++.. .+.
T Consensus 213 ~l~~G~i~~~~~~~~~~~--------------------------------------------~~~--------------- 233 (500)
T TIGR02633 213 VIRDGQHVATKDMSTMSE--------------------------------------------DDI--------------- 233 (500)
T ss_pred EEeCCeEeeecCcccCCH--------------------------------------------HHH---------------
Confidence 999999987664321100 000
Q ss_pred hhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcch
Q 046656 449 ELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGI 528 (1326)
Q Consensus 449 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~ 528 (1326)
...
T Consensus 234 ---------------------------------------------------~~~-------------------------- 236 (500)
T TIGR02633 234 ---------------------------------------------------ITM-------------------------- 236 (500)
T ss_pred ---------------------------------------------------HHH--------------------------
Confidence 000
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHH
Q 046656 529 YIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRL 608 (1326)
Q Consensus 529 ~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 608 (1326)
+ . ..+
T Consensus 237 ------------~----------~-~~~---------------------------------------------------- 241 (500)
T TIGR02633 237 ------------M----------V-GRE---------------------------------------------------- 241 (500)
T ss_pred ------------H----------h-Ccc----------------------------------------------------
Confidence 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHh
Q 046656 609 FKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEF 688 (1326)
Q Consensus 609 f~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef 688 (1326)
.+.
T Consensus 242 ------------------------------------------------------~~~----------------------- 244 (500)
T TIGR02633 242 ------------------------------------------------------ITS----------------------- 244 (500)
T ss_pred ------------------------------------------------------ccc-----------------------
Confidence 000
Q ss_pred cCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccccc
Q 046656 689 FGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNR 768 (1326)
Q Consensus 689 ~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~ 768 (1326)
. .
T Consensus 245 ----------~-------------------------------------------------~------------------- 246 (500)
T TIGR02633 245 ----------L-------------------------------------------------Y------------------- 246 (500)
T ss_pred ----------c-------------------------------------------------c-------------------
Confidence 0 0
Q ss_pred cCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCC
Q 046656 769 IGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPG 848 (1326)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~G 848 (1326)
. .. .. .. .+.-++++|+++.++. .+++.+|+|+||+|++|
T Consensus 247 -----~--------~~--------~~-~~--------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~G 286 (500)
T TIGR02633 247 -----P--------HE--------PH-EI--------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRG 286 (500)
T ss_pred -----c--------cc--------cc-CC--------CCceEEEeCCcccccc----------cccccccccceeEEeCC
Confidence 0 00 00 00 0013667777765420 01235899999999999
Q ss_pred eEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCC---CCCCCCCHHHHHHHHHH
Q 046656 849 VLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ----ETFTRISGYCEQND---IHSPLVTVYESLLYSAW 921 (1326)
Q Consensus 849 e~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~~~ 921 (1326)
|+++|+||||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.++..
T Consensus 287 e~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~ 365 (500)
T TIGR02633 287 EILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVL 365 (500)
T ss_pred cEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhh
Confidence 99999999999999999999998752 248999999987642 12345689999995 47888999999987532
Q ss_pred hhcc--CCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 046656 922 LRLR--TEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 998 (1326)
Q Consensus 922 lr~~--~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~ 998 (1326)
-... ........++.++++++.+++.+ ..++.++ .||||||||++|||+|+.+|++|||||||+|||+.++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~ 440 (500)
T TIGR02633 366 KSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKY 440 (500)
T ss_pred hhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHH
Confidence 1110 11222334456889999999964 5666654 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 999 IVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 999 ~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
.+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 441 ~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 441 EIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999999888999999999986 67788999999986 6888877654
No 29
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.3e-64 Score=621.58 Aligned_cols=449 Identities=23% Similarity=0.311 Sum_probs=344.1
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhccc--CCCCceeeEEEECC----------------------
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQL--DSSLKVSGRVTYNG---------------------- 188 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G---------------------- 188 (1326)
+++++.+|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++|
T Consensus 9 ~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (520)
T TIGR03269 9 KFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVC 85 (520)
T ss_pred EECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccc
Confidence 334457999999999999999999999999999999999996 576 89999972
Q ss_pred -ccCC-------CC------CccceEEEEccC-CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhH
Q 046656 189 -HDMN-------EF------VPQRTAAYISQH-DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFI 253 (1326)
Q Consensus 189 -~~~~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~ 253 (1326)
.++. .. ..++.++||+|+ +.+++.+||+||+.|+....+.. .
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~------------- 142 (520)
T TIGR03269 86 GGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------G------------- 142 (520)
T ss_pred cccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------H-------------
Confidence 2210 00 013468999997 67888899999999865432210 0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHH
Q 046656 254 DVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFH 333 (1326)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~ 333 (1326)
.+....++++++.+||++..+. .+..|||||||||+||+||+.+|++|||||||+|||+.++..
T Consensus 143 -----------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~ 206 (520)
T TIGR03269 143 -----------KEAVGRAVDLIEMVQLSHRITH-----IARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKL 206 (520)
T ss_pred -----------HHHHHHHHHHHHHcCChhhhhc-----CcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHH
Confidence 0112235678999999876553 456799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccc
Q 046656 334 IVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKD 413 (1326)
Q Consensus 334 i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~ 413 (1326)
+.+.|+++++.. +++|++++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 207 l~~~l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~------------------------ 261 (520)
T TIGR03269 207 VHNALEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM------------------------ 261 (520)
T ss_pred HHHHHHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH------------------------
Confidence 999999986533 5667778999999999999999999999998876543310000
Q ss_pred cchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChH
Q 046656 414 QRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSF 493 (1326)
Q Consensus 414 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~ 493 (1326)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHH
Q 046656 494 VYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYA 573 (1326)
Q Consensus 494 ~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~ 573 (1326)
.. .
T Consensus 262 ------------------------------~~-------------------~---------------------------- 264 (520)
T TIGR03269 262 ------------------------------EG-------------------V---------------------------- 264 (520)
T ss_pred ------------------------------hh-------------------c----------------------------
Confidence 00 0
Q ss_pred HHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Q 046656 574 LPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAF 653 (1326)
Q Consensus 574 la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~ 653 (1326)
T Consensus 265 -------------------------------------------------------------------------------- 264 (520)
T TIGR03269 265 -------------------------------------------------------------------------------- 264 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHH
Q 046656 654 GGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVL 733 (1326)
Q Consensus 654 ~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~ 733 (1326)
. .+.
T Consensus 265 -----~--~~~--------------------------------------------------------------------- 268 (520)
T TIGR03269 265 -----S--EVE--------------------------------------------------------------------- 268 (520)
T ss_pred -----h--hhc---------------------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHhccccCCCceeeeccccccccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEe
Q 046656 734 LFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFD 813 (1326)
Q Consensus 734 ~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 813 (1326)
.. . . . +. ...-++++
T Consensus 269 -----------------~~---------------------~--------~------~-----~~--------~~~~l~~~ 283 (520)
T TIGR03269 269 -----------------KE---------------------C--------E------V-----EV--------GEPIIKVR 283 (520)
T ss_pred -----------------cc---------------------c--------c------c-----CC--------CCceEEEe
Confidence 00 0 0 0 00 00136677
Q ss_pred cccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEc-Ccc---CC
Q 046656 814 DVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITIS-GYP---KK 889 (1326)
Q Consensus 814 ~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~ 889 (1326)
|+++.++.. ..+.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ ..
T Consensus 284 ~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~ 353 (520)
T TIGR03269 284 NVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMT 353 (520)
T ss_pred ccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcccccc
Confidence 887766310 0122469999999999999999999999999999999999876 458999996 532 11
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCC
Q 046656 890 Q------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-----LRQSLVGLPG 958 (1326)
Q Consensus 890 ~------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~vg~~~ 958 (1326)
. ...++.+||++|++.+++.+||.|++.+...+. .+.+..++.++++++.++|.+ ..++.+
T Consensus 354 ~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---- 425 (520)
T TIGR03269 354 KPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP---- 425 (520)
T ss_pred ccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh----
Confidence 1 112456899999988888999999998754221 223333456889999999975 345554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||++. .+.+.+|++++|++
T Consensus 426 -~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~ 503 (520)
T TIGR03269 426 -DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD 503 (520)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 369999999999999999999999999999999999999999999999764 899999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 504 -G~i~~~g~~ 512 (520)
T TIGR03269 504 -GKIVKIGDP 512 (520)
T ss_pred -CEEEEECCH
Confidence 788888874
No 30
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-63 Score=616.31 Aligned_cols=455 Identities=21% Similarity=0.294 Sum_probs=346.0
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC----ccceEEEEccCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV----PQRTAAYISQHDVHI 210 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 210 (1326)
+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.++
T Consensus 15 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~ 91 (501)
T PRK11288 15 PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLV 91 (501)
T ss_pred CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhcc
Confidence 3456999999999999999999999999999999999999887 999999998875322 135799999998889
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++......+. . .. .+....++.+++.+||++..+.
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~-~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~---- 136 (501)
T PRK11288 92 PEMTVAENLYLGQLPHKGGI-V------NR------------------------RLLNYEAREQLEHLGVDIDPDT---- 136 (501)
T ss_pred CCCCHHHHHHhcccccccCC-C------CH------------------------HHHHHHHHHHHHHcCCCCCcCC----
Confidence 99999999998532100000 0 00 0111235667899999765554
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. .+++|+.++|+..++.++||+|++|
T Consensus 137 -~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiiitHd~~~~~~~~d~i~~l 213 (501)
T PRK11288 137 -PLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA--EGRVILYVSHRMEEIFALCDAITVF 213 (501)
T ss_pred -chhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999999854 3566777899999999999999999
Q ss_pred cCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhHHHhh
Q 046656 371 SDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKLTDEL 450 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l 450 (1326)
++|+++..++..+. .+.++..+.
T Consensus 214 ~~G~i~~~~~~~~~-------------------------------------------~~~~~~~~~-------------- 236 (501)
T PRK11288 214 KDGRYVATFDDMAQ-------------------------------------------VDRDQLVQA-------------- 236 (501)
T ss_pred ECCEEEeecCcccc-------------------------------------------CCHHHHHHH--------------
Confidence 99999864421000 000000000
Q ss_pred cCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCcchhh
Q 046656 451 RTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDGGIYI 530 (1326)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~ 530 (1326)
+.
T Consensus 237 --------------------------------------------------------------~~---------------- 238 (501)
T PRK11288 237 --------------------------------------------------------------MV---------------- 238 (501)
T ss_pred --------------------------------------------------------------hc----------------
Confidence 00
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHHHHHH
Q 046656 531 GAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIGRLFK 610 (1326)
Q Consensus 531 g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 610 (1326)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK11288 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHHHhcC
Q 046656 611 QLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVANEFFG 690 (1326)
Q Consensus 611 ~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~nef~~ 690 (1326)
+
T Consensus 239 -------------------------------------------------------------------------------~ 239 (501)
T PRK11288 239 -------------------------------------------------------------------------------G 239 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccccccC
Q 046656 691 HSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLDNRIG 770 (1326)
Q Consensus 691 ~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 770 (1326)
.... . . .
T Consensus 240 ~~~~----~-----------------~-----------------------------~----------------------- 246 (501)
T PRK11288 240 REIG----D-----------------I-----------------------------Y----------------------- 246 (501)
T ss_pred CCcc----c-----------------c-----------------------------c-----------------------
Confidence 0000 0 0 0
Q ss_pred CcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeE
Q 046656 771 GTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVL 850 (1326)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~ 850 (1326)
. .. +... .+..++++|+++. .+++|+|++|++||+
T Consensus 247 ---~--------~~---------~~~~--------~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~ 281 (501)
T PRK11288 247 ---G--------YR---------PRPL--------GEVRLRLDGLKGP-----------------GLREPISFSVRAGEI 281 (501)
T ss_pred ---c--------cc---------ccCC--------CCcEEEEeccccC-----------------CcccceeEEEeCCcE
Confidence 0 00 0000 0113567777521 389999999999999
Q ss_pred EEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCCCCHHHHHHHHHHhh
Q 046656 851 TALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQND---IHSPLVTVYESLLYSAWLR 923 (1326)
Q Consensus 851 ~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~~~lr 923 (1326)
++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++.+.....
T Consensus 282 ~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~ 359 (501)
T PRK11288 282 VGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRH 359 (501)
T ss_pred EEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchh
Confidence 99999999999999999999876 4689999999875321 1235689999985 4788899999998753211
Q ss_pred ccC-C--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 046656 924 LRT-E--VDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 999 (1326)
Q Consensus 924 ~~~-~--~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~ 999 (1326)
... . ......++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~ 434 (501)
T PRK11288 360 HLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHE 434 (501)
T ss_pred hcccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHH
Confidence 100 0 11223345688999999994 66777764 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCCh
Q 046656 1000 VMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSNS 1051 (1326)
Q Consensus 1000 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~~ 1051 (1326)
+++.|++++++|.|||++|||++ ++.+.+|++++|++ |++++.|+.++.+
T Consensus 435 l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 435 IYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred HHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 99999999888999999999986 67788999999985 7899999876543
No 31
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-63 Score=619.06 Aligned_cols=466 Identities=22% Similarity=0.281 Sum_probs=346.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCCCc-------cceEEEEccCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEFVP-------QRTAAYISQHD 207 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 207 (1326)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998620 138999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 208 V--HIGEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 208 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
. +++.+||+|++.+..... +.. + .+....++++++.+||++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988643221 100 0 01123356789999997521
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+ .-++.+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+.+||+++|+..++.++|
T Consensus 148 ~--~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~ 224 (529)
T PRK15134 148 K--RLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVRKLA 224 (529)
T ss_pred H--HHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHHHhc
Confidence 0 012455679999999999999999999999999999999999999999999998653 3456777899999999999
Q ss_pred CeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhh
Q 046656 365 DDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQ 444 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 444 (1326)
|+|++|++|++++.|+++++... |.. ...
T Consensus 225 dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~---------- 253 (529)
T PRK15134 225 DRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT---------- 253 (529)
T ss_pred CEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH----------
Confidence 99999999999999887654210 000 000
Q ss_pred hHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccC
Q 046656 445 KLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVS 524 (1326)
Q Consensus 445 ~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~ 524 (1326)
+.+
T Consensus 254 --------------------------------------~~~--------------------------------------- 256 (529)
T PRK15134 254 --------------------------------------QKL--------------------------------------- 256 (529)
T ss_pred --------------------------------------HHH---------------------------------------
Confidence 000
Q ss_pred CcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCcccc
Q 046656 525 DGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPN 604 (1326)
Q Consensus 525 ~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~ 604 (1326)
+. ..+
T Consensus 257 -----------------~~----------~~~------------------------------------------------ 261 (529)
T PRK15134 257 -----------------LN----------SEP------------------------------------------------ 261 (529)
T ss_pred -----------------HH----------hCc------------------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHH
Q 046656 605 IGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIV 684 (1326)
Q Consensus 605 ~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~ 684 (1326)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccc
Q 046656 685 ANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNY 764 (1326)
Q Consensus 685 ~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~ 764 (1326)
. . .
T Consensus 262 -------~------~-----------------------------------------------~----------------- 264 (529)
T PRK15134 262 -------S------G-----------------------------------------------D----------------- 264 (529)
T ss_pred -------c------c-----------------------------------------------c-----------------
Confidence 0 0 0
Q ss_pred cccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchh-hhccccccCceEeeeccee
Q 046656 765 LDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKE-MKLKGVHEDKLVLLNGVSG 843 (1326)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~-~~~~~~~~~~~~vL~~vs~ 843 (1326)
.. .. . .. .+.-++++|+++.++.... .+ + ..+.+.+|+|+||
T Consensus 265 ------~~----------~~---------~-~~--------~~~~l~~~~l~~~~~~~~~~~~--~-~~~~~~il~~isl 307 (529)
T PRK15134 265 ------PV----------PL---------P-EP--------ASPLLDVEQLQVAFPIRKGILK--R-TVDHNVVVKNISF 307 (529)
T ss_pred ------cc----------cc---------C-CC--------CCCcccccCcEEEeecCccccc--c-ccccceeeeccee
Confidence 00 00 0 00 0002456666665521000 00 0 0012469999999
Q ss_pred EEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCC--CCCCCCCHHHH
Q 046656 844 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------TFTRISGYCEQND--IHSPLVTVYES 915 (1326)
Q Consensus 844 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~~~Tv~E~ 915 (1326)
+|++||+++|+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|+. .+++.+||.|+
T Consensus 308 ~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~ 384 (529)
T PRK15134 308 TLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQI 384 (529)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHH
Confidence 999999999999999999999999999863 489999999875321 1245689999996 46788999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 916 LLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 916 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
+.+....+.. ..+..+.++.++++++.++|. +..++.++ .|||||||||+|||+|+.+|++|||||||+|||+
T Consensus 385 l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~ 458 (529)
T PRK15134 385 IEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYPA-----EFSGGQRQRIAIARALILKPSLIILDEPTSSLDK 458 (529)
T ss_pred HHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCCc-----cCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCH
Confidence 9886432211 123334456788999999997 45666653 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 995 RAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
.++..+++.|++++++ |+|||++||++. ++.+.||++++|++ |+++..|+.
T Consensus 459 ~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 459 TVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999865 899999999986 57788999999986 688988874
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-62 Score=605.74 Aligned_cols=456 Identities=18% Similarity=0.265 Sum_probs=344.8
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHD 207 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d 207 (1326)
.+++++++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++
T Consensus 6 ~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~ 82 (491)
T PRK10982 6 KSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQEL 82 (491)
T ss_pred EEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccc
Confidence 3344567999999999999999999999999999999999999987 9999999988754321 35699999998
Q ss_pred CCCCCCCHHHHHHhhhh-hccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 208 VHIGEMTVRETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
.+++.+||+||+.++.. ..+.. . .. .+....++.+++.+|+++..+.
T Consensus 83 ~~~~~~tv~~~l~~~~~~~~~~~--~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~ 130 (491)
T PRK10982 83 NLVLQRSVMDNMWLGRYPTKGMF--V------DQ------------------------DKMYRDTKAIFDELDIDIDPRA 130 (491)
T ss_pred ccccCCCHHHHhhcccccccccc--c------CH------------------------HHHHHHHHHHHHHcCCCCCccC
Confidence 88899999999988532 11100 0 00 0011235677899999876654
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
. +..|||||||||+||++|+.+|++|||||||+|||+.++.++.+.|+++++ .+.+|+.++|+.+++.++||+
T Consensus 131 ~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~d~ 203 (491)
T PRK10982 131 K-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLCDE 203 (491)
T ss_pred c-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCE
Confidence 4 457999999999999999999999999999999999999999999999864 355667789999999999999
Q ss_pred EEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhhhH
Q 046656 367 IILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQKL 446 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 446 (1326)
|++|++|+++..|+++++.. .+..+.+
T Consensus 204 i~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------- 230 (491)
T PRK10982 204 ITILRDGQWIATQPLAGLTM--------------------------------------------DKIIAMM--------- 230 (491)
T ss_pred EEEEECCEEEeecChhhCCH--------------------------------------------HHHHHHH---------
Confidence 99999999998776532100 0000000
Q ss_pred HHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccCCc
Q 046656 447 TDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVSDG 526 (1326)
Q Consensus 447 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 526 (1326)
.
T Consensus 231 -------------------------------------------------------------------~------------ 231 (491)
T PRK10982 231 -------------------------------------------------------------------V------------ 231 (491)
T ss_pred -------------------------------------------------------------------h------------
Confidence 0
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccccHH
Q 046656 527 GIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPNIG 606 (1326)
Q Consensus 527 ~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 606 (1326)
T Consensus 232 -------------------------------------------------------------------------------- 231 (491)
T PRK10982 232 -------------------------------------------------------------------------------- 231 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHHHH
Q 046656 607 RLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIVAN 686 (1326)
Q Consensus 607 ~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~~n 686 (1326)
T Consensus 232 -------------------------------------------------------------------------------- 231 (491)
T PRK10982 232 -------------------------------------------------------------------------------- 231 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccccc
Q 046656 687 EFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNYLD 766 (1326)
Q Consensus 687 ef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 766 (1326)
+... .
T Consensus 232 ---~~~~---~--------------------------------------------------------------------- 236 (491)
T PRK10982 232 ---GRSL---T--------------------------------------------------------------------- 236 (491)
T ss_pred ---CCCc---c---------------------------------------------------------------------
Confidence 0000 0
Q ss_pred cccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeEEe
Q 046656 767 NRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFR 846 (1326)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~ 846 (1326)
. .. . .. . . .. .+..++++|+++.. +.+|+|+|++|+
T Consensus 237 ~---~~-~--------~~--~------~-~~--------~~~~i~~~~l~~~~---------------~~~l~~vsl~i~ 272 (491)
T PRK10982 237 Q---RF-P--------DK--E------N-KP--------GEVILEVRNLTSLR---------------QPSIRDVSFDLH 272 (491)
T ss_pred c---cc-c--------cc--c------C-CC--------CCcEEEEeCccccc---------------CcccceeeEEEe
Confidence 0 00 0 00 0 0 00 01146778887641 248999999999
Q ss_pred CCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCccc----ccceEEEeecCC---CCCCCCCHHHHHHHH
Q 046656 847 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQET----FTRISGYCEQND---IHSPLVTVYESLLYS 919 (1326)
Q Consensus 847 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~---~~~~~~Tv~E~l~f~ 919 (1326)
+||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.... .++.+||++|+. .+++.+|+.++..+.
T Consensus 273 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~ 350 (491)
T PRK10982 273 KGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLIS 350 (491)
T ss_pred CCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehh
Confidence 999999999999999999999999876 45899999998764321 234589999985 357778887774332
Q ss_pred HH--hhccCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 046656 920 AW--LRLRTE-VDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 995 (1326)
Q Consensus 920 ~~--lr~~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~ 995 (1326)
.. ...... ......++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|+||||||||+|||+.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~ 425 (491)
T PRK10982 351 NIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIG-----SLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVG 425 (491)
T ss_pred hhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccc-----cCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChh
Confidence 10 000001 12223345678899999995 45566654 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCC
Q 046656 996 AAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGS 1049 (1326)
Q Consensus 996 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~ 1049 (1326)
++..+++.|+++.++|+|||++|||++ ++.+.||++++|++ |+++..++.+.
T Consensus 426 ~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~~ 477 (491)
T PRK10982 426 AKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTKT 477 (491)
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 999999999999888999999999986 57788999999986 68888776543
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.7e-61 Score=593.06 Aligned_cols=451 Identities=18% Similarity=0.253 Sum_probs=330.5
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVH 209 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 209 (1326)
+++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..
T Consensus 12 ~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 88 (490)
T PRK10938 12 RLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNT 88 (490)
T ss_pred EcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcch
Confidence 334456999999999999999999999999999999999999987 9999999976643221 2458999997532
Q ss_pred --C------CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc
Q 046656 210 --I------GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD 281 (1326)
Q Consensus 210 --~------~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 281 (1326)
+ ..+||+|++.+.. +....++.+++.+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~ 126 (490)
T PRK10938 89 DMLSPGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGIT 126 (490)
T ss_pred hhcccchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCH
Confidence 1 1457777664310 0012245678999998
Q ss_pred ccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHH
Q 046656 282 VCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETY 361 (1326)
Q Consensus 282 ~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 361 (1326)
+..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ . +.+|+.++|+..++.
T Consensus 127 ~~~~~-----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~ 199 (490)
T PRK10938 127 ALLDR-----RFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIP 199 (490)
T ss_pred hhhhC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHH
Confidence 76664 4457999999999999999999999999999999999999999999999865 3 556667889999999
Q ss_pred hhCCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhch
Q 046656 362 DLFDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFH 441 (1326)
Q Consensus 362 ~~~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 441 (1326)
++||+|++|++|+++.+|+++++.. . +.+.. +
T Consensus 200 ~~~d~v~~l~~G~i~~~~~~~~~~~-----------~----~~~~~-------------------------~-------- 231 (490)
T PRK10938 200 DFVQFAGVLADCTLAETGEREEILQ-----------Q----ALVAQ-------------------------L-------- 231 (490)
T ss_pred hhCCEEEEEECCEEEEeCCHHHHhc-----------c----hhhhh-------------------------h--------
Confidence 9999999999999999887665420 0 00000 0
Q ss_pred hhhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCC
Q 046656 442 VGQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKD 521 (1326)
Q Consensus 442 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~ 521 (1326)
. .+ + .
T Consensus 232 ---------~------------------------------~~------~-----------------------------~- 236 (490)
T PRK10938 232 ---------A------------------------------HS------E-----------------------------Q- 236 (490)
T ss_pred ---------h------------------------------hh------h-----------------------------c-
Confidence 0 00 0 0
Q ss_pred ccCCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCc
Q 046656 522 SVSDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGF 601 (1326)
Q Consensus 522 ~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl 601 (1326)
... .
T Consensus 237 -~~~-----------------------------~---------------------------------------------- 240 (490)
T PRK10938 237 -LEG-----------------------------V---------------------------------------------- 240 (490)
T ss_pred -cCc-----------------------------c----------------------------------------------
Confidence 000 0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHH
Q 046656 602 DPNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQN 681 (1326)
Q Consensus 602 ~~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~ 681 (1326)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccc
Q 046656 682 AIVANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESE 761 (1326)
Q Consensus 682 al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~ 761 (1326)
. .+..
T Consensus 241 ------------~-~~~~-------------------------------------------------------------- 245 (490)
T PRK10938 241 ------------Q-LPEP-------------------------------------------------------------- 245 (490)
T ss_pred ------------c-cCcc--------------------------------------------------------------
Confidence 0 0000
Q ss_pred ccccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecc
Q 046656 762 SNYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGV 841 (1326)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~v 841 (1326)
. . ... . . .. .. ....++++|+++.++ ++.+|+|+
T Consensus 246 ----------~-~--------~~~-~--~--~~-~~--------~~~~l~~~~l~~~~~-------------~~~il~~v 279 (490)
T PRK10938 246 ----------D-E--------PSA-R--H--AL-PA--------NEPRIVLNNGVVSYN-------------DRPILHNL 279 (490)
T ss_pred ----------c-c--------ccc-c--c--cc-CC--------CCceEEEeceEEEEC-------------CeeEEeec
Confidence 0 0 000 0 0 00 00 011478888887663 24599999
Q ss_pred eeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc----ccccceEEEeecCCCCCC--CCCHHHH
Q 046656 842 SGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ----ETFTRISGYCEQNDIHSP--LVTVYES 915 (1326)
Q Consensus 842 s~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~~Tv~E~ 915 (1326)
||+|++||+++|+||||||||||+++|+|..++ ..+|+|.++|.+... ...++.+||++|++.+.+ ..|++|+
T Consensus 280 sl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~ 358 (490)
T PRK10938 280 SWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNV 358 (490)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHH
Confidence 999999999999999999999999999997531 148999999976421 123456899999875543 2467776
Q ss_pred HHHHHHh--hccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 916 LLYSAWL--RLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 916 l~f~~~l--r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+.+...- ....... ...++.++++++.++|.+ ..++.++ .|||||||||+||++|+.+|++|||||||+||
T Consensus 359 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~lllLDEPt~gL 432 (490)
T PRK10938 359 ILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPFH-----SLSWGQQRLALIVRALVKHPTLLILDEPLQGL 432 (490)
T ss_pred HHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 6543210 1111112 223456889999999987 7777654 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcC-CEEEEEecCCcHHHHH-HhceeeEEecCcEEEEE
Q 046656 993 DARAAAIVMRTVKNTVETG-RTVVCTIHQPSIDIFE-AFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~D~v~~l~~gg~~~~~ 1044 (1326)
|+.++..+++.|++++++| .|||++||+++ ++.+ .+|++++|++ |++++.
T Consensus 433 D~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 433 DPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999999999999998765 47999999986 4655 4899999986 565554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=6.4e-59 Score=512.04 Aligned_cols=470 Identities=24% Similarity=0.322 Sum_probs=363.2
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCC--CCceeeEEEECCccCCCCCcc-------ceEEEEcc
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDS--SLKVSGRVTYNGHDMNEFVPQ-------RTAAYISQ 205 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 205 (1326)
+...++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999975 234689999999987443321 36999999
Q ss_pred CC--CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 206 HD--VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 206 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
++ .+-|-.|+...+.-..+++.. ....+++.++-++|+.+|+.+.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 95 445666777776655544311 1112234456778999999876
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
...+ +.++..|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++-.. -+..++.|+|+..-+..+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5543 5789999999999999999999999999999999999999999999999998665 467788899999999999
Q ss_pred CCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhh
Q 046656 364 FDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVG 443 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 443 (1326)
+|+|+||.+|+++++|+.+++. ..|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF--------~~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLF--------AAPQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHh--------hCCCC-------------------------hHH-----------------
Confidence 9999999999999999987663 11211 000
Q ss_pred hhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCcc
Q 046656 444 QKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSV 523 (1326)
Q Consensus 444 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~ 523 (1326)
+.+.+. .|
T Consensus 255 r~Ll~a--eP---------------------------------------------------------------------- 262 (534)
T COG4172 255 RKLLAA--EP---------------------------------------------------------------------- 262 (534)
T ss_pred HHHHhc--CC----------------------------------------------------------------------
Confidence 000000 00
Q ss_pred CCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCccc
Q 046656 524 SDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDP 603 (1326)
Q Consensus 524 ~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~ 603 (1326)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHH
Q 046656 604 NIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAI 683 (1326)
Q Consensus 604 ~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al 683 (1326)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeecccccc
Q 046656 684 VANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESN 763 (1326)
Q Consensus 684 ~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~ 763 (1326)
.+
T Consensus 263 --------------~g---------------------------------------------------------------- 264 (534)
T COG4172 263 --------------SG---------------------------------------------------------------- 264 (534)
T ss_pred --------------CC----------------------------------------------------------------
Confidence 00
Q ss_pred ccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeeccee
Q 046656 764 YLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSG 843 (1326)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~ 843 (1326)
.+.+.+ +..++.++.+|+...++.+..+-.. ..+...++++||+
T Consensus 265 ---------------------------~~~p~~-------~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl 308 (534)
T COG4172 265 ---------------------------DPPPLP-------EDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISL 308 (534)
T ss_pred ---------------------------CCCCCC-------CCCCceEEecceEEEEecCCccccc--cchheEEecccee
Confidence 000000 0012234555554444433211000 1123569999999
Q ss_pred EEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc------ccccceEEEeecCC--CCCCCCCHHHH
Q 046656 844 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ------ETFTRISGYCEQND--IHSPLVTVYES 915 (1326)
Q Consensus 844 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~~~~Tv~E~ 915 (1326)
+.++||.+||+|.||||||||=.+|.++..+ +|+|.++|.++.. ...++.+-.|+||+ .+.|.+||.+-
T Consensus 309 ~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qI 385 (534)
T COG4172 309 TLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQI 385 (534)
T ss_pred EecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHH
Confidence 9999999999999999999999999998763 5999999998753 23567789999997 46799999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 916 LLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 916 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
+.-+.....+ ..+..++++++.++|+.+||.+- +++. +.++|||||||++||||++.+|++++||||||.||.
T Consensus 386 I~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~ 459 (534)
T COG4172 386 IEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDR 459 (534)
T ss_pred hhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhH
Confidence 8877655443 46788899999999999999863 3333 246999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 995 RAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
.-+.+|.++|+++.+ .|.+-++++||+. -+-.+||++++|++ |++|..||.
T Consensus 460 SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 460 SVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999974 4999999999986 46667999999985 799999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.9e-58 Score=576.03 Aligned_cols=201 Identities=23% Similarity=0.318 Sum_probs=165.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|..+ +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 478899987663 3469999999999999999999999999999999999876 4589999854 2
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 046656 889 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~-~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGq 966 (1326)
..+||++|+. .+++.+||+|++.+...... .... ...++++++.+++.+ ..++.++ .|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKVG-----VLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 67788999999987642221 1111 123457899999964 4566654 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE-EEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~G 1045 (1326)
|||++||++|+.+|++|||||||+|||+.++..+++.|+++. | |||++||++. .+...||++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999862 4 8999999986 5778899999998767776 555
Q ss_pred C
Q 046656 1046 P 1046 (1326)
Q Consensus 1046 ~ 1046 (1326)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 5
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-58 Score=576.92 Aligned_cols=198 Identities=18% Similarity=0.255 Sum_probs=164.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 588999988763 2459999999999999999999999999999999999876 45899999873
Q ss_pred CcccccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 046656 889 KQETFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgG 965 (1326)
+.+||++|+.. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+..++ .||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSVK-----VLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCccc-----ccCHH
Confidence 35899999864 456789999986421 11 1 1134578899999994 56676654 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE-EE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1044 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~ 1044 (1326)
||||++||++|+.+|+||||||||+|||+.+...+++.|+++ +.|||++|||+. .+.+.+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999876 459999999986 57778999999997 5665 87
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.7e-58 Score=576.68 Aligned_cols=201 Identities=20% Similarity=0.295 Sum_probs=164.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 478899887663 2469999999999999999999999999999999999876 4589999854 1
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 046656 889 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~-~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGq 966 (1326)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+ ..++.++ .|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKVG-----QLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 47788999999987642211 1111 123567899999964 4566653 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE-EEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~G 1045 (1326)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++|||+. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5777899999998767766 555
Q ss_pred C
Q 046656 1046 P 1046 (1326)
Q Consensus 1046 ~ 1046 (1326)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 5
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-55 Score=553.96 Aligned_cols=197 Identities=22% Similarity=0.341 Sum_probs=161.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+.++|+++.++ ++.+|+|+|++|++|+++||+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899987763 3569999999999999999999999999999999999876 45899999741
Q ss_pred CcccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 046656 889 KQETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgG 965 (1326)
..+||++|+. .+.+..|+.+++.- . . .......+.++|+.+++.. ..++.++ .||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~----~~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--A----PQELEQKLRDYLGGFGFQGDKVTEETR-----RFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--C----chhhHHHHHHHHHHcCCChhHhcCchh-----hCCHH
Confidence 2589999974 34455677776531 1 1 1112345789999999963 5666664 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE-EE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1044 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~ 1044 (1326)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 57788999999986 5765 88
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.3e-56 Score=552.82 Aligned_cols=198 Identities=23% Similarity=0.247 Sum_probs=167.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ + ..|+++|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 477888886652 1 24899999999999999999999999999999999876 458999885
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.++ .|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNVK-----DLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCcc-----cCCHHHHH
Confidence 1489999998888889999999874211 111 1246889999999988887764 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++|||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 5777899999996 3 77777764
Q ss_pred C
Q 046656 1048 G 1048 (1326)
Q Consensus 1048 ~ 1048 (1326)
.
T Consensus 538 ~ 538 (590)
T PRK13409 538 S 538 (590)
T ss_pred C
Confidence 3
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.3e-55 Score=552.93 Aligned_cols=202 Identities=24% Similarity=0.336 Sum_probs=164.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+.++|+++.++ ++.+|+|+|++|++|+++||+||||||||||+++|+|..+ +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478899987763 3469999999999999999999999999999999999876 45899998 4321
Q ss_pred CcccccceEEEeecCC-CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 046656 889 KQETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~-~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSgGq 966 (1326)
.+||++|+. .+.+.+||.|++.+.... ..... ....+.++++.+++. +..++.++ .|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~---~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE---VMVNG--RPRHVLGYLQDFLFHPKRAMTPVK-----ALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc---ccccc--hHHHHHHHHHhcCCCHHHHhChhh-----hCCHHH
Confidence 489999975 577889999999874321 01111 123478889999985 45666654 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe-cCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-~gg~~~~~G 1045 (1326)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...||++++|. +|.-+.|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999875 459999999976 5777899999997 565556777
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 64
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-55 Score=510.63 Aligned_cols=465 Identities=21% Similarity=0.338 Sum_probs=359.3
Q ss_pred hhcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc----ceEEEE
Q 046656 128 HILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ----RTAAYI 203 (1326)
Q Consensus 128 ~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv 203 (1326)
+++++.++..++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|.+..-..++ .-|+.|
T Consensus 12 ~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V 88 (500)
T COG1129 12 RGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATV 88 (500)
T ss_pred ecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEE
Confidence 35567778889999999999999999999999999999999999999998 99999999988655543 458999
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 204 SQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 204 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
.|+..++|++||.|||.++...... ...+ +..+....+..+|+.+|++..
T Consensus 89 ~QEl~L~p~LsVaeNifLgre~~~~---~g~i---------------------------d~~~m~~~A~~~l~~lg~~~~ 138 (500)
T COG1129 89 HQELSLVPNLSVAENIFLGREPTRR---FGLI---------------------------DRKAMRRRARELLARLGLDID 138 (500)
T ss_pred eechhccCCccHHHHhhcccccccC---CCcc---------------------------CHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999887543221 0000 011123345678999999755
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
.++.|+ +||+||||-|.||+|+..++++++|||||++|+...+..+++.++++.. +|..+|.|+|..+|++++
T Consensus 139 ~~~~v~-----~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i 211 (500)
T COG1129 139 PDTLVG-----DLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEI 211 (500)
T ss_pred hhhhhh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHh
Confidence 777776 4999999999999999999999999999999999999999999999854 588889999999999999
Q ss_pred CCeEEEecCCeEEEEcCh-hhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchh
Q 046656 364 FDDIILLSDGQIVYQGPC-ELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHV 442 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~-~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 442 (1326)
||+|.||.||+++..++. .+. +.+++.
T Consensus 212 ~DritVlRDG~~v~~~~~~~~~--------------------------------------------~~~~lv-------- 239 (500)
T COG1129 212 ADRITVLRDGRVVGTRPTAAET--------------------------------------------SEDELV-------- 239 (500)
T ss_pred cCEEEEEeCCEEeeecccccCC--------------------------------------------CHHHHH--------
Confidence 999999999999876652 211 000000
Q ss_pred hhhHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCc
Q 046656 443 GQKLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDS 522 (1326)
Q Consensus 443 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~ 522 (1326)
+
T Consensus 240 -----------------------------------~-------------------------------------------- 240 (500)
T COG1129 240 -----------------------------------R-------------------------------------------- 240 (500)
T ss_pred -----------------------------------H--------------------------------------------
Confidence 0
Q ss_pred cCCcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCcc
Q 046656 523 VSDGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFD 602 (1326)
Q Consensus 523 ~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~ 602 (1326)
. |+|
T Consensus 241 -----------------~---------------------------------------------------------MvG-- 244 (500)
T COG1129 241 -----------------L---------------------------------------------------------MVG-- 244 (500)
T ss_pred -----------------H---------------------------------------------------------hhC--
Confidence 0 000
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHH
Q 046656 603 PNIGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNA 682 (1326)
Q Consensus 603 ~~~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~a 682 (1326)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccc
Q 046656 683 IVANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESES 762 (1326)
Q Consensus 683 l~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~ 762 (1326)
...+.
T Consensus 245 --------r~~~~------------------------------------------------------------------- 249 (500)
T COG1129 245 --------RELED------------------------------------------------------------------- 249 (500)
T ss_pred --------cchhh-------------------------------------------------------------------
Confidence 00000
Q ss_pred cccccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecce
Q 046656 763 NYLDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVS 842 (1326)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs 842 (1326)
. + .. .... ...+..+++++++.. ..++|+|
T Consensus 250 -----------~---~----~~---------~~~~------~~~~~~l~v~~l~~~-----------------~~~~dvS 279 (500)
T COG1129 250 -----------L---F----PE---------PPEE------GIGEPVLEVRNLSGG-----------------GKVRDVS 279 (500)
T ss_pred -----------h---c----cc---------cccc------CCCCcEEEEecCCCC-----------------CceeCce
Confidence 0 0 00 0000 001224566666521 1588999
Q ss_pred eEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecC---CCCCCCCCHHHH
Q 046656 843 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQN---DIHSPLVTVYES 915 (1326)
Q Consensus 843 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~~Tv~E~ 915 (1326)
|++++||++||-|-=|||+|-|+++|.|..+ ..+|+|.+||.+.... ..+.-++|||.| +-++..++|.||
T Consensus 280 f~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~N 357 (500)
T COG1129 280 FTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAEN 357 (500)
T ss_pred eEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHh
Confidence 9999999999999999999999999999654 4589999999986532 234568999986 456788999999
Q ss_pred HHHHHHhhcc-C-CCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 916 LLYSAWLRLR-T-EVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 916 l~f~~~lr~~-~-~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+.++...+.. . -++.....+.+++..+.+++..- .+..+ ..||||++|||.|||.|..+|+||||||||.|+
T Consensus 358 i~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGI 432 (500)
T COG1129 358 ITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGI 432 (500)
T ss_pred eehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCc
Confidence 9887332221 1 24555556678999999998642 23444 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCChhh
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSNSSD 1053 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~~~~ 1053 (1326)
|..+...|.++|++++++|++||++|-+.. |+...||||++|.+ |+++-.=+.++.+++
T Consensus 433 DVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~~~~tee 491 (500)
T COG1129 433 DVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDREEATEE 491 (500)
T ss_pred ccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEeccccCCHH
Confidence 999999999999999999999999999985 89999999999995 788764444433333
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8.6e-53 Score=530.62 Aligned_cols=200 Identities=20% Similarity=0.269 Sum_probs=158.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 578999988763 12359999999999999999999999999999999999876 45899998652
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgGqr 967 (1326)
..+||++|+. ...+++.++..+... +...... .+.++++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~-~~~~~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMM-RCFPGVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHH-HhcCCCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 3589999975 234556665432211 1111111 245788999999974 555554 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE-EEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~G~ 1046 (1326)
|||+||++|+.+|++|||||||+|||+.+...+.+.|++. . .|||++|||+. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 3 49999999986 57778999999986 6776 7776
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.4e-51 Score=496.96 Aligned_cols=226 Identities=25% Similarity=0.295 Sum_probs=173.0
Q ss_pred cccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCC
Q 046656 130 LTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVH 209 (1326)
Q Consensus 130 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 209 (1326)
++..++.+++|+|+|+.+.+|+.++|+|+|||||||||++|+|.+.|+ +|+|...+ .-+++|++|+...
T Consensus 9 ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~ 77 (530)
T COG0488 9 LSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPL 77 (530)
T ss_pred eEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCc
Confidence 344556788999999999999999999999999999999999999998 99998765 2379999999998
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchh---HHHH-HHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLF---IDVF-MKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~---~~~~-~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
.+..||++.+.-+..- .++...+...... ..+|.+ .+.+ .......+.+.+..++.++..||++.. +
T Consensus 78 ~~~~tv~~~v~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~ 148 (530)
T COG0488 78 DPEKTVLDYVIEGFGE-----LRELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-D 148 (530)
T ss_pred CCCccHHHHHHhhhHH-----HHHHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-c
Confidence 8899999999875431 1111111111111 111110 0111 111222334445678888999999876 5
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
+.+ .+||||||.||++|++|..+|++|+|||||++||..+..++-+.|++. .+ ++|+++|+..-.-+.|+
T Consensus 149 ~~~-----~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t 218 (530)
T COG0488 149 RPV-----SSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVAT 218 (530)
T ss_pred Cch-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhh
Confidence 544 469999999999999999999999999999999999999999999863 35 66678999999999999
Q ss_pred eEEEecCCeEE-EEcChhhHH
Q 046656 366 DIILLSDGQIV-YQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv-~~G~~~~~~ 385 (1326)
+|+-++.|++. |.|.++...
T Consensus 219 ~I~~ld~g~l~~y~Gny~~~~ 239 (530)
T COG0488 219 HILELDRGKLTPYKGNYSSYL 239 (530)
T ss_pred heEEecCCceeEecCCHHHHH
Confidence 99999999775 777776543
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.4e-51 Score=468.84 Aligned_cols=466 Identities=22% Similarity=0.322 Sum_probs=361.9
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc----ceEEEEc
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ----RTAAYIS 204 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 204 (1326)
..++.++...+++|||+.+++||+++|+|.||||||||+++|.|.++|+ +|+|.++|+++.-..|+ .-||.|.
T Consensus 9 ~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVh 85 (501)
T COG3845 9 GITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVH 85 (501)
T ss_pred ccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEe
Confidence 3456667788999999999999999999999999999999999999998 99999999998655553 3589999
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
||..+++++||.||+..+..-.. ..+.+ ..+....++++.+.+||+---
T Consensus 86 QHF~Lv~~lTV~ENiiLg~e~~~-~~~~~------------------------------~~~~~~~i~~l~~~yGl~vdp 134 (501)
T COG3845 86 QHFMLVPTLTVAENIILGLEPSK-GGLID------------------------------RRQARARIKELSERYGLPVDP 134 (501)
T ss_pred eccccccccchhhhhhhcCcccc-ccccC------------------------------HHHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999998764321 00000 011234467788999999888
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
|.+|++ ||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|++++. .|.+||.|+|-..|+.+.|
T Consensus 135 ~~~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~ia 207 (501)
T COG3845 135 DAKVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIA 207 (501)
T ss_pred cceeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhh
Confidence 877764 999999999999999999999999999999999999999999999875 4677778999999999999
Q ss_pred CeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcCccccchhhhccCCCcccCCHHHHHHHHHhchhhh
Q 046656 365 DDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTSRKDQRQYWVHREMPYRFITVQEFSEAFQSFHVGQ 444 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 444 (1326)
|++.||..|+++-.-++ . .. .+.+++++
T Consensus 208 DrvTVLR~Gkvvgt~~~--~------------~~-----------------------------~t~~ela~--------- 235 (501)
T COG3845 208 DRVTVLRRGKVVGTVDP--V------------AE-----------------------------TTEEELAE--------- 235 (501)
T ss_pred CeeEEEeCCeEEeeecC--C------------CC-----------------------------CCHHHHHH---------
Confidence 99999999998643211 0 00 00000000
Q ss_pred hHHHhhcCcCCCCCCCCccccCCCCCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhhhccccCCCCccC
Q 046656 445 KLTDELRTPLDKSKSHPAALTTKGYGVGMKELFKANISREFLLIKRNSFVYIFKLIQLSTMALVSSTLFFRANMNKDSVS 524 (1326)
Q Consensus 445 ~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~ 524 (1326)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhHHHHHHHHHHHHhhhHHHHHHhhcchhhHhhhccCccchHHHHHHHHHHHhhHHHHHHHhhheeeeeccCcccc
Q 046656 525 DGGIYIGAMFFAVIMTTFNGMSDISMTVAKLPIFYKQRGLRFYPAWAYALPAWILKIPISFLEVSIWVFLTYYAIGFDPN 604 (1326)
Q Consensus 525 ~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~ 604 (1326)
+ |+|
T Consensus 236 ---------------l---------------------------------------------------------MvG---- 239 (501)
T COG3845 236 ---------------L---------------------------------------------------------MVG---- 239 (501)
T ss_pred ---------------H---------------------------------------------------------hcC----
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHHhhCHHHHHHHHHH
Q 046656 605 IGRLFKQLLLLLFINQMASALFRFIAAAGRNMIVAMSFGSFALVVFFAFGGFVLSQDDINNGWIWGYWCSPMMYAQNAIV 684 (1326)
Q Consensus 605 ~~~ff~~~l~~~l~~~~~~~lf~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~i~~~~~w~~~isp~~y~~~al~ 684 (1326)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCccccccCCCcchhhHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeeccccccc
Q 046656 685 ANEFFGHSWRKFTTNSTESLGVQVLKSRGFFPHAFWYWIGLGAMIGFVLLFNIGFTLSLTFLNQFEKPQAVILEESESNY 764 (1326)
Q Consensus 685 ~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~lig~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~ 764 (1326)
+.. ..
T Consensus 240 ------~~v--------------------------------------------------------------~~------- 244 (501)
T COG3845 240 ------REV--------------------------------------------------------------VL------- 244 (501)
T ss_pred ------Ccc--------------------------------------------------------------cc-------
Confidence 000 00
Q ss_pred cccccCCcccccccCCCCCCCCCCCccccCCCccCCcccCCCCceEEEecccceeccchhhhccccccCceEeeecceeE
Q 046656 765 LDNRIGGTIQLSTYGSNSSHSKNSGVVRATQPKKRGMVLPFEPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGA 844 (1326)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~ 844 (1326)
. . . ..+..+ .+..++++|++..... +...+++|||+
T Consensus 245 ---------~--------~------~---~~~~~p------g~~vL~V~~L~v~~~~------------~~~~v~~vs~~ 280 (501)
T COG3845 245 ---------R--------V------V---KPPSTP------GEVVLEVEDLSVKDRR------------GVTAVKDVSFE 280 (501)
T ss_pred ---------c--------c------c---cCCCCC------CCeEEEEeeeEeecCC------------CCceeeeeeeE
Confidence 0 0 0 000000 0235677777654321 23579999999
Q ss_pred EeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC-Cc----ccccceEEEeecCCC---CCCCCCHHHHH
Q 046656 845 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK-KQ----ETFTRISGYCEQNDI---HSPLVTVYESL 916 (1326)
Q Consensus 845 i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~~----~~~~~~~gyv~Q~~~---~~~~~Tv~E~l 916 (1326)
+++||++||.|..|-|-+.|+.+|+|..++ ..|+|.++|.+. .. ...+.-+||||.|.. +.+.+|+.||+
T Consensus 281 Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~ 358 (501)
T COG3845 281 VRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENL 358 (501)
T ss_pred EecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHh
Confidence 999999999999999999999999998753 459999999986 21 122346899999863 46789999999
Q ss_pred HHHHHhh----ccCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 046656 917 LYSAWLR----LRTEVDSETRKMFIEEIMELVELKPLR-QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 991 (1326)
Q Consensus 917 ~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsg 991 (1326)
.+...-+ ...-++.....++..++++.++..... +.. .+.||||++||+-+||+|.++|++|+..+||-|
T Consensus 359 vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~~-----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrG 433 (501)
T COG3845 359 VLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDAP-----ARSLSGGNQQKLILARELARRPDLLIAAQPTRG 433 (501)
T ss_pred hhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCcc-----hhhcCCcceehhhhhhhhccCCCEEEEcCCCcc
Confidence 8764321 111345566778899999999987321 222 246999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCCh
Q 046656 992 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSNS 1051 (1326)
Q Consensus 992 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~~ 1051 (1326)
||..+.+.|.+.|.+.++.|+.|++++-+++ ++++.+|||.+|.+ |+++...+..+.+
T Consensus 434 LDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~~t 491 (501)
T COG3845 434 LDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEEAT 491 (501)
T ss_pred ccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-CceecccccccCC
Confidence 9999999999999999999999999999997 89999999999995 7999888876543
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-45 Score=374.83 Aligned_cols=214 Identities=27% Similarity=0.372 Sum_probs=189.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
|+++|+++++ +...+|+|||++|++||+++|+|||||||||||++|.|+.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6778887766 45689999999999999999999999999999999999887 56999999997553
Q ss_pred ----cccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 890 ----QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 890 ----~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
-...|+.+|+|+|+..+||++||.||+..+...- ...++++.++...++|+.+||.+.+|.... .||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYPA-----QLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----ccCcH
Confidence 2346788999999999999999999999865322 345677788889999999999999998854 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||||+|||||+.+|+++++|||||.|||+....+.+.+++++++|.|+||+||.... .-+.+|||++|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999863 5677899999985 7999988
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-45 Score=376.89 Aligned_cols=229 Identities=24% Similarity=0.365 Sum_probs=196.4
Q ss_pred hhcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC----CccceEEEE
Q 046656 128 HILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF----VPQRTAAYI 203 (1326)
Q Consensus 128 ~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv 203 (1326)
+++.+.++...+|+|||+.+++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..|+.+|+|
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmV 82 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMV 82 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCee
Confidence 34556778889999999999999999999999999999999999999998 99999999765321 235789999
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 204 SQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 204 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
+|+..+||++||.||+..+...-. .....+++....++|+.+||.+.
T Consensus 83 FQ~fnLFPHlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL~~k 129 (240)
T COG1126 83 FQQFNLFPHLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGLADK 129 (240)
T ss_pred cccccccccchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCchhh
Confidence 999999999999999998653210 01122344556778999999998
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
+| .++..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++ .+.|++.++|.+.-+.+.
T Consensus 130 a~-----~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~V 202 (240)
T COG1126 130 AD-----AYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREV 202 (240)
T ss_pred hh-----hCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHh
Confidence 87 56778999999999999999999999999999999999999999999999987 467777799999999999
Q ss_pred CCeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHH
Q 046656 364 FDDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQE 407 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~ 407 (1326)
+|||+.|++|+++.+|+++++ |..|.+....+|+..
T Consensus 203 adrviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 203 ADRVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred hheEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 999999999999999999887 566776667777654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.6e-42 Score=394.79 Aligned_cols=201 Identities=19% Similarity=0.237 Sum_probs=156.6
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
..+.++|+++.++. +..++++++|-|.+++.+|+|||||+|||||||++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 36789999987752 2258999999999999999999999999999999999877 457877543221
Q ss_pred CCcccccceEEEeecC--CCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCH
Q 046656 888 KKQETFTRISGYCEQN--DIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLST 964 (1326)
Q Consensus 888 ~~~~~~~~~~gyv~Q~--~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSg 964 (1326)
.+++..|+ +.+.-..++-|+++=. ..+..+.+.+..++..+||... .+..+ +.||+
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p~-----~~LS~ 512 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVPM-----SQLSD 512 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccch-----hhccc
Confidence 12333343 2233345666665421 1112345568899999999843 44444 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||+||.+|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++||.. -+-+.++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999988888765 458999999986 477889999999999999999
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 985
No 48
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-42 Score=375.18 Aligned_cols=218 Identities=27% Similarity=0.425 Sum_probs=187.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.|+ .+ ++|+|||++|++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 578999998874 12 59999999999999999999999999999999999877 5699999999886
Q ss_pred CcccccceEEEeecCCCC--CCCCCHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQETFTRISGYCEQNDIH--SPLVTVYESLLYSAWLRLR--TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~--~~~~Tv~E~l~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
....-+..+|||||...+ ...+||+|-+..+...+.. ....++ .++.++++|+.+|+.+++|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~-d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKK-DKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHH-HHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 554435679999996532 3347999999886433321 122233 35779999999999999999997 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||+||+.|||||+++|++|+|||||+|+|+.++..++++|++++++|+|||+++||++ .+.+.||++++|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 6889999999997 589999
Q ss_pred cCCCCC
Q 046656 1045 GPLGSN 1050 (1326)
Q Consensus 1045 G~~~~~ 1050 (1326)
|++++.
T Consensus 220 G~~~~~ 225 (254)
T COG1121 220 GPPEEV 225 (254)
T ss_pred cChhhc
Confidence 998653
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=375.24 Aligned_cols=218 Identities=24% Similarity=0.332 Sum_probs=191.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++.. |.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5677877555321 1134579999999999999999999999999999999999887 56999999997754
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 Q------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
. ..+|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+.++... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 2467889999999999999999999999877653 678889999999999999999888875 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
|||||||+|||||+.+|+||++|||||.|||++.+.|.++|+++.++ |.||+++||+++ -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999755 999999999976 36668999999985 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.9e-42 Score=390.64 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=193.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|++..++ .++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeC
Confidence 356677776652 14679999999999999999999999999999999999987 4699999999886
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.... ...+++++++++.++|.+..++.+ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 54 3567789999999999999999999999998886543 344567999999999998666665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcC-CEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999997 78888999999985 7999999
Q ss_pred CCCCChhhHHHHHh
Q 046656 1046 PLGSNSSDLISYLQ 1059 (1326)
Q Consensus 1046 ~~~~~~~~~~~~f~ 1059 (1326)
+. .++...+.
T Consensus 220 ~~----~~l~~~~~ 229 (293)
T COG1131 220 TP----EELKEKFG 229 (293)
T ss_pred CH----HHHHHhhc
Confidence 75 34444443
No 51
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.9e-42 Score=359.38 Aligned_cols=217 Identities=27% Similarity=0.386 Sum_probs=193.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+++++|+.++ +.+.|++|||++|++||+++|||+||+||||||+.|.|+.+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 68889988765 45789999999999999999999999999999999999988 4699999999986
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 046656 889 KQ------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~ 961 (1326)
.+ ...++++|+++|+-.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 135678999999999999999999999864 455567788888888888999999876 5554 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||++||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+||+++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999987 68999999999996 79
Q ss_pred EEEEcCCCC
Q 046656 1041 EIYVGPLGS 1049 (1326)
Q Consensus 1041 ~~~~G~~~~ 1049 (1326)
++..|+.++
T Consensus 224 v~~~Gt~~e 232 (263)
T COG1127 224 VIAEGTPEE 232 (263)
T ss_pred EEEeCCHHH
Confidence 999999743
No 52
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.9e-42 Score=374.92 Aligned_cols=229 Identities=27% Similarity=0.384 Sum_probs=194.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++.+|+++.|+ ++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367888888774 4679999999999999999999999999999999999887 4589999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRT-EVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ..+.+.+||+||.....+.+||+|.+.++..-.... ....++.++.++++|+.+++.+++++.+. .|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccCh
Confidence 54 457789999999998888999999999875422211 11223334469999999999999999875 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||+.|||||+++|+||+||||||+||...+..++++++++. ++|+|||+++||++. ...+||++++|++ |++++
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 99999999999999999999999999999999999999999998 459999999999984 7789999999995 79999
Q ss_pred EcCCCC-ChhhHHHHHh
Q 046656 1044 VGPLGS-NSSDLISYLQ 1059 (1326)
Q Consensus 1044 ~G~~~~-~~~~~~~~f~ 1059 (1326)
.|++.+ .+++.++--+
T Consensus 220 ~G~p~evlT~e~l~~Vy 236 (258)
T COG1120 220 QGTPEEVLTEENLREVY 236 (258)
T ss_pred ecCcchhcCHHHHHHHh
Confidence 998643 4555554333
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-42 Score=362.54 Aligned_cols=214 Identities=27% Similarity=0.367 Sum_probs=191.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++|+||+..+. ++.+++|+|++|++||++.++|||||||||+|++|.++.. +.+|+|+|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 57888887653 4679999999999999999999999999999999999987 56999999999876
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP--LRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~vg~~~~~~LSg 964 (1326)
. ..+||.+|||-|.-.++|++||.||+.+-..+. ..++++.+++++|+|++++|.+ +.++.. .+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRYP-----HELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----hhcCc
Confidence 5 357889999999999999999999998865543 4567888889999999999975 677664 56999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||+|||.+||||+.+|+||+||||++.|||-++..+++.++++.++ |+|||++|||.+ |.+.++|||.+|+ +|+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999998765 999999999987 7889999999998 579998
Q ss_pred EcCCC
Q 046656 1044 VGPLG 1048 (1326)
Q Consensus 1044 ~G~~~ 1048 (1326)
.+++.
T Consensus 217 ~~~P~ 221 (309)
T COG1125 217 YDTPD 221 (309)
T ss_pred eCCHH
Confidence 88764
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-42 Score=359.95 Aligned_cols=217 Identities=25% Similarity=0.396 Sum_probs=191.7
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEcc
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQ 205 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 205 (1326)
++++++.++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+.+. ||.+|||-|
T Consensus 6 nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQ 82 (309)
T COG1125 6 NVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQ 82 (309)
T ss_pred eeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhh
Confidence 4556677888999999999999999999999999999999999999998 9999999999877654 689999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
+-.+||++||.||+.+-..+++..+ ++.+.+++++|+.+||+...
T Consensus 83 qigLFPh~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~~- 127 (309)
T COG1125 83 QIGLFPHLTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPSE- 127 (309)
T ss_pred hcccCCCccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHHH-
Confidence 9999999999999999777665421 22345678999999998521
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
..+++++.|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+.. ++|||.++|+.+|++.++|
T Consensus 128 --~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLad 204 (309)
T COG1125 128 --YADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLAD 204 (309)
T ss_pred --HhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhc
Confidence 2357899999999999999999999999999999999999999999999999886655 5666779999999999999
Q ss_pred eEEEecCCeEEEEcChhhHHH
Q 046656 366 DIILLSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~~ 386 (1326)
||++|++|+++..+++++++.
T Consensus 205 ri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 205 RIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred eEEEecCCeEEEeCCHHHHHh
Confidence 999999999999999999863
No 55
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-42 Score=371.56 Aligned_cols=223 Identities=27% Similarity=0.373 Sum_probs=196.0
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHDVH 209 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 209 (1326)
..++|+|||+.|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..... |+.+|+++|+..+
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnL 94 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNL 94 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccc
Confidence 467999999999999999999999999999999999999998 9999999988765532 4789999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
+...||.||++|..+..+.. ..+.+.++.++|+.+||++.+|
T Consensus 95 LssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~---- 136 (339)
T COG1135 95 LSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKAD---- 136 (339)
T ss_pred cccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc----
Confidence 99999999999998876532 1223456788999999998776
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|.+.|+++.+.. +.||+.++|-++-+.+.||||.+
T Consensus 137 -~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVav 214 (339)
T COG1135 137 -RYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVAV 214 (339)
T ss_pred -cCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhheE
Confidence 5677899999999999999999999999999999999999999999999987755 66777799999999999999999
Q ss_pred ecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhc
Q 046656 370 LSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVT 409 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~ 409 (1326)
|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 215 m~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 215 LDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred eeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 999999999999988 45676666666766554
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-42 Score=364.02 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=180.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+.++++++.+. ...+|+|||++|++||+++|+||||||||||||+|+|+.+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 466778877663 3579999999999999999999999999999999999987 4699999999987
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
.. ....+|||+|++.++|..||+||+.|+...+. .+++++.++++++|+.+||.+..|+.. ..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 32 34568999999999999999999999876653 455666778999999999999999875 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
||+|||||+.+|+||+||||++.||+.++..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999864 5899999999987 677889999999975
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-42 Score=387.93 Aligned_cols=226 Identities=28% Similarity=0.417 Sum_probs=198.8
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc-ceEEEEccCC
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ-RTAAYISQHD 207 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d 207 (1326)
++.+.++...+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+.
T Consensus 8 ~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~y 84 (338)
T COG3839 8 NVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNY 84 (338)
T ss_pred eeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCc
Confidence 3444455444999999999999999999999999999999999999998 99999999999998775 8899999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.++|+|||+||+.|+.+.++... .+...+++++.+.|+|++..|
T Consensus 85 ALyPhmtV~~Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~-- 128 (338)
T COG3839 85 ALYPHMTVYENIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLN-- 128 (338)
T ss_pred cccCCCcHHHHhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHh--
Confidence 99999999999999998765421 123455788899999999887
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
+.+++|||||||||++||||+.+|++++||||+|.||+..+.++...++++-+. -++|+|.++|+..|+..++|||
T Consensus 129 ---r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~-l~~T~IYVTHDq~EAmtladri 204 (338)
T COG3839 129 ---RKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHER-LGTTTIYVTHDQVEAMTLADRI 204 (338)
T ss_pred ---cCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHh-cCCcEEEEcCCHHHHHhhCCEE
Confidence 457789999999999999999999999999999999999999999999997544 4667777999999999999999
Q ss_pred EEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHH
Q 046656 368 ILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFL 405 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l 405 (1326)
.+|++|++...|++.++ |..|...-+|.|+
T Consensus 205 ~Vm~~G~i~Q~g~p~el--------y~~P~n~fVA~Fi 234 (338)
T COG3839 205 VVMNDGRIQQVGTPLEL--------YERPANLFVAGFI 234 (338)
T ss_pred EEEeCCeeeecCChHHH--------hhCccchhhhhhc
Confidence 99999999999999998 4577777777775
No 58
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-42 Score=357.37 Aligned_cols=230 Identities=26% Similarity=0.337 Sum_probs=194.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+..|+ +++++|+|||+.|++||++||+|+|||||||||++|.|+.. +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478889887764 35689999999999999999999999999999999999766 5689999999765
Q ss_pred Cc------ccccceEEEeecCCCCCCCCCHHHHHHHHHH-----hhccCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 046656 889 KQ------ETFTRISGYCEQNDIHSPLVTVYESLLYSAW-----LRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLP 957 (1326)
Q Consensus 889 ~~------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~-----lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 957 (1326)
.. ..+++.+||++|+..+.+.++|.||++.+.. .+.......++.+..+-++|+.+|+.+.+-+..+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 2457889999999999999999999987542 2222234444555668899999999998887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
.|||||+|||+|||||+++|+||+.|||+++|||.++..||+.|+++.+ .|.|||++.||.+. ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 5999999999999999999999999999999999999999999999975 49999999999874 667899999998
Q ss_pred cCcEEEEEcCCCCChhhHHHHHh
Q 046656 1037 RGGQEIYVGPLGSNSSDLISYLQ 1059 (1326)
Q Consensus 1037 ~gg~~~~~G~~~~~~~~~~~~f~ 1059 (1326)
+ |+++|.||..+.+++.++..+
T Consensus 223 ~-G~ivfDg~~~el~~~~~~~iY 244 (258)
T COG3638 223 A-GRIVFDGPASELTDEALDEIY 244 (258)
T ss_pred C-CcEEEeCChhhhhHHHHHHHh
Confidence 5 799999998766655554433
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=367.54 Aligned_cols=228 Identities=29% Similarity=0.452 Sum_probs=192.2
Q ss_pred ccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCc---cCCCCCc-cceEEEEccC
Q 046656 131 TTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGH---DMNEFVP-QRTAAYISQH 206 (1326)
Q Consensus 131 ~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~ 206 (1326)
++..+...+++|||+.|+.||+++++|||||||||||++|+|+..|+ .|.|.+||. +...... .|.+|||+|+
T Consensus 9 ~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~ 85 (345)
T COG1118 9 KKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQH 85 (345)
T ss_pred hhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEec
Confidence 34455677999999999999999999999999999999999999998 999999999 5555333 4889999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
..+|++|||.+||+|+.+++.. + |+ ..+.+.+++++|+.+.|++.++
T Consensus 86 YALF~HmtVa~NIAFGl~~~~~--~-----------------p~-------------~~~~r~rv~elL~lvqL~~la~- 132 (345)
T COG1118 86 YALFPHMTVADNIAFGLKVRKE--R-----------------PS-------------EAEIRARVEELLRLVQLEGLAD- 132 (345)
T ss_pred hhhcccchHHhhhhhccccccc--C-----------------CC-------------hhhHHHHHHHHHHHhcccchhh-
Confidence 9999999999999999877521 1 10 1123345677899999987665
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
+++..|||||||||++||||+..|++|+||||+++||.+.+.++-+.|+++....+ .+.+.++|+..|++++||+
T Consensus 133 ----ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladr 207 (345)
T COG1118 133 ----RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADR 207 (345)
T ss_pred ----cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcce
Confidence 78889999999999999999999999999999999999999999999999866544 5555689999999999999
Q ss_pred EEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHH
Q 046656 367 IILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQE 407 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~ 407 (1326)
|++|++|+|...||++++ |..|...-...|+-+
T Consensus 208 vvvl~~G~Ieqvg~p~ev--------~~~P~s~fV~~f~G~ 240 (345)
T COG1118 208 VVVLNQGRIEQVGPPDEV--------YDHPASRFVARFLGE 240 (345)
T ss_pred EEEecCCeeeeeCCHHHH--------hcCCCccceeccccc
Confidence 999999999999999998 445655555555443
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-42 Score=388.67 Aligned_cols=230 Identities=29% Similarity=0.422 Sum_probs=203.1
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCC
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHD 207 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d 207 (1326)
++++.++...+|+|+|+.|++||++.++|||||||||||++|||+..|+ +|+|.++|.+++...+ +|.+++|+|+.
T Consensus 10 ~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~Y 86 (352)
T COG3842 10 NVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSY 86 (352)
T ss_pred eeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCc
Confidence 3456667788999999999999999999999999999999999999998 9999999999988766 48899999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+||+|||+||+.|+.+.++... ..+...+++++|+.++|++.++
T Consensus 87 ALFPHltV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-- 131 (352)
T COG3842 87 ALFPHMTVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-- 131 (352)
T ss_pred ccCCCCcHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh--
Confidence 99999999999999987432111 1123456788999999998665
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
+++..|||||||||++||||+.+|++||||||.|+||..-+.++..-++++.+.. +.+.|.++|+..|++.++|||
T Consensus 132 ---R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI 207 (352)
T COG3842 132 ---RKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRI 207 (352)
T ss_pred ---hChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccce
Confidence 6677899999999999999999999999999999999999999999999987765 666777999999999999999
Q ss_pred EEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHh
Q 046656 368 ILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEV 408 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~ 408 (1326)
.+|++|+|...|+++++ |..|...-+|+|+-+.
T Consensus 208 ~Vm~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 208 AVMNDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred EEccCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 99999999999999999 5678888888887653
No 61
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-42 Score=347.90 Aligned_cols=200 Identities=30% Similarity=0.384 Sum_probs=184.0
Q ss_pred EeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC--cccccceEEEeecCCCCCCCCCHH
Q 046656 836 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK--QETFTRISGYCEQNDIHSPLVTVY 913 (1326)
Q Consensus 836 ~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~~Tv~ 913 (1326)
++++||||+++.||++||+|+|||||||+|++|+++.. |.+|.|++||.+.. +...++.+|.++.+..++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999987 46999999999863 345678899999888899999999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 046656 914 ESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 993 (1326)
Q Consensus 914 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD 993 (1326)
|||.|.+.+. ++...+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999998876 45566778889999999999999999986 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 994 ARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 994 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
..+.+.+.+.++++.++|++||++||..+ ++.++||++++|++ |++++.|+.
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 99999999999999988999999999986 78889999999996 799999986
No 62
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-41 Score=359.88 Aligned_cols=193 Identities=30% Similarity=0.432 Sum_probs=168.2
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------c-ccceEEEeecCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------T-FTRISGYCEQNDIHS 907 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 907 (1326)
..+|++||++|++||+++|+|||||||||||++|.|...+ .+|.|.++|.+.... . .++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998874 689999999876421 2 245799999999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 046656 908 PLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQ-SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 986 (1326)
Q Consensus 908 ~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 986 (1326)
|.+||.||+.+...+... ....+++.++++++.+||.+..+ +.+ ..|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~p-----~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKKP-----SELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCCc-----hhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22255667899999999986665 544 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 987 EPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 987 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
|||.+||+++...|+++++++.++ |+|||++|||+ ++...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999865 99999999997 5788999999999764
No 63
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9e-41 Score=349.89 Aligned_cols=217 Identities=26% Similarity=0.359 Sum_probs=185.5
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEE
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAY 202 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~y 202 (1326)
.++++.+.+.||+|||+.+++||+++|+|||||||||||+.|.|+++|+ +|+|.++|.++..... ++++|+
T Consensus 13 ~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~Gv 89 (263)
T COG1127 13 GVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGV 89 (263)
T ss_pred eeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeE
Confidence 3445567888999999999999999999999999999999999999998 9999999999865432 467999
Q ss_pred EccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc
Q 046656 203 ISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV 282 (1326)
Q Consensus 203 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 282 (1326)
++|+-.+|..+||+||+.|..+-..- + |+ ...+..+..-|+.+||..
T Consensus 90 lFQ~gALFssltV~eNVafplre~~~---------l----------p~--------------~~i~~lv~~KL~~VGL~~ 136 (263)
T COG1127 90 LFQQGALFSSLTVFENVAFPLREHTK---------L----------PE--------------SLIRELVLMKLELVGLRG 136 (263)
T ss_pred EeeccccccccchhHhhheehHhhcc---------C----------CH--------------HHHHHHHHHHHHhcCCCh
Confidence 99999999999999999997653211 1 11 112233455588899986
Q ss_pred cccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHh
Q 046656 283 CADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYD 362 (1326)
Q Consensus 283 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 362 (1326)
. +++.++..||||+|||+++|||++.+|+++|+||||+||||.++..+.+.++++.+..+ .|+++++|+.++++.
T Consensus 137 ~----~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~ 211 (263)
T COG1127 137 A----AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLT 211 (263)
T ss_pred h----hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHh
Confidence 4 23478899999999999999999999999999999999999999999999999887665 555568999999999
Q ss_pred hCCeEEEecCCeEEEEcChhhHHH
Q 046656 363 LFDDIILLSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 363 ~~D~vilL~~G~iv~~G~~~~~~~ 386 (1326)
.||+|++|.+|+|+.+|+++++.+
T Consensus 212 i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 212 IADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred hhceEEEEeCCEEEEeCCHHHHHh
Confidence 999999999999999999999863
No 64
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=356.00 Aligned_cols=200 Identities=25% Similarity=0.372 Sum_probs=175.3
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIG 211 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~ 211 (1326)
+.+....+|+|+|+.+.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.+++ .+...++||+|++.++|
T Consensus 11 ~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlP 85 (248)
T COG1116 11 KSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLP 85 (248)
T ss_pred EEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccc
Confidence 3344578999999999999999999999999999999999999998 999999999883 35678999999999999
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
-+||+||+.|+....+... .+...+++++|+.+||....| .
T Consensus 86 W~Tv~~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~ 126 (248)
T COG1116 86 WLTVLDNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----K 126 (248)
T ss_pred hhhHHhhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----c
Confidence 9999999999987765211 111225678899999998876 6
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
+++.|||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.|++.++|+.+|+..++|||++|+
T Consensus 127 ~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~ 205 (248)
T COG1116 127 YPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLS 205 (248)
T ss_pred CccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEec
Confidence 788999999999999999999999999999999999999999999999987754 5667779999999999999999999
Q ss_pred C--CeEE
Q 046656 372 D--GQIV 376 (1326)
Q Consensus 372 ~--G~iv 376 (1326)
+ |+|.
T Consensus 206 ~~P~~i~ 212 (248)
T COG1116 206 NRPGRIG 212 (248)
T ss_pred CCCccee
Confidence 8 4553
No 65
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-41 Score=361.62 Aligned_cols=205 Identities=28% Similarity=0.445 Sum_probs=185.6
Q ss_pred ceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc---cCCc-ccccceEEEeecCCCCCCC
Q 046656 834 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY---PKKQ-ETFTRISGYCEQNDIHSPL 909 (1326)
Q Consensus 834 ~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 909 (1326)
...+++|||+.|+.||++||+|||||||||||++|+|+.+ +..|.|.+||. +.++ ....|.+|||+|+..++++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999988 46999999999 5544 3345789999999999999
Q ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 046656 910 VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 989 (1326)
Q Consensus 910 ~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPt 989 (1326)
+||.+|+.|+...+ ....++.+.+.+++++|+.++|.++.+... ..||||||||+++||||+..|++|+||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 344566777889999999999999998875 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 990 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 990 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
++||+.-+..+.+.|+++.++ |.|+|++|||+. +..+.+|||++|++ |+|.-.||..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999866 999999999986 89999999999996 7999999864
No 66
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-41 Score=377.82 Aligned_cols=216 Identities=29% Similarity=0.395 Sum_probs=193.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|++..++ +..+|+|+|++|++||+++|+|||||||||||++|||+.. +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 477888877663 2229999999999999999999999999999999999987 5699999999988
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
+. ....|.+++|+|+..++|++||+||+.|+..++ ..++++.+++|+++.+.|+|.++.|+.. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 66 445688999999999999999999999998766 3467778889999999999999999885 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+++|++++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. |...++||+.+|+ +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999974 8889999999999 589999998
Q ss_pred CCC
Q 046656 1047 LGS 1049 (1326)
Q Consensus 1047 ~~~ 1049 (1326)
+.+
T Consensus 218 p~e 220 (338)
T COG3839 218 PLE 220 (338)
T ss_pred hHH
Confidence 743
No 67
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-40 Score=379.23 Aligned_cols=219 Identities=34% Similarity=0.459 Sum_probs=190.6
Q ss_pred hhcccccc-cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--CccceEEEEc
Q 046656 128 HILTTKKK-HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--VPQRTAAYIS 204 (1326)
Q Consensus 128 ~~~~~~~~-~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~ 204 (1326)
.+++++++ .+.+|+|||+.+++|++++++||||||||||+|+|+|++.|+ +|+|.++|.+.... ..++.+||++
T Consensus 8 ~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~ 84 (293)
T COG1131 8 RNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVP 84 (293)
T ss_pred cceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEc
Confidence 35566777 689999999999999999999999999999999999999997 99999999887652 3357899999
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|++.+++.+||+|||.|.+++.+.... .....++++++.+||++.+
T Consensus 85 ~~~~~~~~lT~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~ 130 (293)
T COG1131 85 QEPSLYPELTVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKA 130 (293)
T ss_pred cCCCCCccccHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhh
Confidence 999999999999999999988764310 1123467889999999844
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+ ..+++||+||||||+||.||+++|+++||||||+|||+.++.++++.|++++.. ++++|+..+|...++..+|
T Consensus 131 ~-----~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~ 204 (293)
T COG1131 131 N-----KKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELC 204 (293)
T ss_pred C-----cchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhC
Confidence 3 456689999999999999999999999999999999999999999999999864 4466777899999999999
Q ss_pred CeEEEecCCeEEEEcChhhHHHHHH
Q 046656 365 DDIILLSDGQIVYQGPCELVLDFFE 389 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~~~F~ 389 (1326)
|+|++|++|++++.|+.+++...+.
T Consensus 205 d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 205 DRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred CEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 9999999999999999998876544
No 68
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.1e-40 Score=333.70 Aligned_cols=214 Identities=25% Similarity=0.325 Sum_probs=185.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
|.|+||+..|+. ++.+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 578899877753 3569999999999999999999999999999999999877 46899999999864
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 Q------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
. .-++|.+|+|+||..+.+..||+||+.|..... ..+..+.+++|.++|+.+||.+.++... ..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALP-----SQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCc-----cccC
Confidence 3 235789999999999999999999999987654 3455667788999999999999888764 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||+||++||||++.+|++|+.||||.+|||..+..||+++.++.+.|.|||+.|||.+ -+...-.|++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~-lv~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE-LVNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH-HHHhccCcEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999999999999999864 24444568888986 68887
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
....
T Consensus 218 d~~~ 221 (223)
T COG2884 218 DESR 221 (223)
T ss_pred cccc
Confidence 6543
No 69
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=339.09 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=186.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCC---CCCeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 885 (1326)
.++.+|++.+|+ .+.+|+|||+.|++++++||+|||||||||||++|.+.. ++-..+|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 577888887763 467999999999999999999999999999999999853 3346799999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGE 959 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~ 959 (1326)
.++.. ..+|+.+|.|+|.+..+| +|++||+.|+.++....+ ++.++.|++.|+...|++- .|++-.. .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 88643 347889999999999999 999999999987764433 6677889999999999864 3443222 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.+|||||+|||||||||+-+|+||+||||||+|||.+...|-++|.+++ +.-|||++||.+. ......|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 4699999999999999999999999999999999999999999999998 4799999999876 56778899999996 6
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
+++.+|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999986
No 70
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=378.43 Aligned_cols=217 Identities=28% Similarity=0.387 Sum_probs=194.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+..+. +..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888887663 4679999999999999999999999999999999999987 4699999999998
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ...+|.+|+|+|+..+||++||+||+.|+..++ ....+++.+++|+++++.++|.++.++.+ ..|||||+
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 65 345788999999999999999999999987633 33455667789999999999999998876 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+||||.|+||..-+..++.-++++.++ |.|.|++|||.. +...+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998754 999999999976 78889999999985 79999998
Q ss_pred CCC
Q 046656 1047 LGS 1049 (1326)
Q Consensus 1047 ~~~ 1049 (1326)
+.+
T Consensus 221 P~e 223 (352)
T COG3842 221 PEE 223 (352)
T ss_pred HHH
Confidence 753
No 71
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-40 Score=363.06 Aligned_cols=215 Identities=32% Similarity=0.438 Sum_probs=184.4
Q ss_pred ccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc---ceEEEEccCC
Q 046656 131 TTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ---RTAAYISQHD 207 (1326)
Q Consensus 131 ~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d 207 (1326)
+..++++++|+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+...+ |.+|||||..
T Consensus 9 s~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~ 85 (258)
T COG1120 9 SFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSP 85 (258)
T ss_pred EEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCC
Confidence 34456778999999999999999999999999999999999999998 99999999999876553 7899999998
Q ss_pred CCCCCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 208 VHIGEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
...+.+||+|-+.++..-. +.-.. . ..+....++..|+.+|+.+.++.
T Consensus 86 ~~~~~~tV~d~V~~GR~p~~~~~~~------~-------------------------~~~D~~~v~~aL~~~~~~~la~r 134 (258)
T COG1120 86 SAPFGLTVYELVLLGRYPHLGLFGR------P-------------------------SKEDEEIVEEALELLGLEHLADR 134 (258)
T ss_pred CCCCCcEEeehHhhcCCcccccccC------C-------------------------CHhHHHHHHHHHHHhCcHHHhcC
Confidence 8888999999999975321 11000 0 01122357888999999999885
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
. +..|||||||||.||+||+.+|++|+||||||+||...+.++++.++++++. .+.++|+++|+...+..+||+
T Consensus 135 ~-----~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~ 208 (258)
T COG1120 135 P-----VDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADH 208 (258)
T ss_pred c-----ccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCE
Confidence 4 4569999999999999999999999999999999999999999999999865 456667789999999999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
+++|++|+++.+|++++++
T Consensus 209 ~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 209 LILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred EEEEECCeEEeecCcchhc
Confidence 9999999999999998875
No 72
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-39 Score=372.57 Aligned_cols=214 Identities=27% Similarity=0.427 Sum_probs=187.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 578899987763 3569999999999999999999999999999999999887 4689999999986
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
.. ...++.+|||+|+..+++.+||+||+.|.+.++ ..+..+..++++++++.++|.+..++.++ +||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYF---GLSAAAARALVPPLLEFAKLENKADAKVG-----ELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHHH
Confidence 43 234678999999999999999999999866543 22334445568899999999988888774 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 68888999999986 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 73
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-40 Score=332.16 Aligned_cols=212 Identities=30% Similarity=0.344 Sum_probs=185.4
Q ss_pred ccccccce-eecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--CccceEEEEccCC
Q 046656 131 TTKKKHLT-ILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--VPQRTAAYISQHD 207 (1326)
Q Consensus 131 ~~~~~~~~-iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d 207 (1326)
+++++.++ +++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+.... ..++.+|.++.+.
T Consensus 8 ~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~ 84 (245)
T COG4555 8 TKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGER 84 (245)
T ss_pred hhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCc
Confidence 34444444 899999999999999999999999999999999999998 99999999887432 2367899999888
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.++..||++|||.|.+++.+.. + .+.+.+++.+.+.|+|..|.|+.
T Consensus 85 glY~RlT~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rR 130 (245)
T COG4555 85 GLYARLTARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRR 130 (245)
T ss_pred ChhhhhhHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHH
Confidence 8899999999999998876532 1 12344578889999999999998
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
+| ++|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++.. .+.+|+..+|.++|+..+||+|
T Consensus 131 v~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrv 203 (245)
T COG4555 131 VG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRV 203 (245)
T ss_pred Hh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheE
Confidence 88 5999999999999999999999999999999999999999999998743 3667777899999999999999
Q ss_pred EEecCCeEEEEcChhhHHH
Q 046656 368 ILLSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~~ 386 (1326)
++|.+|++++.|+.+++..
T Consensus 204 ivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 204 IVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEecCcEEEcCCHHHHHH
Confidence 9999999999999988753
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=334.36 Aligned_cols=225 Identities=24% Similarity=0.369 Sum_probs=183.4
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCCC-----ccceEEEEcc
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEFV-----PQRTAAYISQ 205 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q 205 (1326)
.++++.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+.. .|+++|.|+|
T Consensus 16 yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQ 95 (253)
T COG1117 16 YYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQ 95 (253)
T ss_pred EECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeecc
Confidence 3456789999999999999999999999999999999988754 45678999999999986542 3688999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc-cc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV-CA 284 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~ 284 (1326)
.+.-|| +|++||+.|+.+.+|... +.+. .+++..|+.-.|.+ ..
T Consensus 96 kPnPFp-~SIydNVayG~r~~g~~~--~~ld--------------------------------eiVe~sLk~AaLWdEVK 140 (253)
T COG1117 96 KPNPFP-MSIYDNVAYGLRLHGIKD--KELD--------------------------------EIVESSLKKAALWDEVK 140 (253)
T ss_pred CCCCCC-chHHHHHHHhHHhhccch--HHHH--------------------------------HHHHHHHHHhHhHHHhH
Confidence 999998 999999999999987643 1111 11222222222221 12
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
|.+ ++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+.+.++.+ .-+|+.++|++.++.+..
T Consensus 141 DrL--~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvS 215 (253)
T COG1117 141 DRL--HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVS 215 (253)
T ss_pred HHh--hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHh
Confidence 211 234567999999999999999999999999999999999999999999999853 556777899999999999
Q ss_pred CeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHH
Q 046656 365 DDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFL 405 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l 405 (1326)
|+...+..|++++.|+.+++ |..|.++...||+
T Consensus 216 D~taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 216 DYTAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred HhhhhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999999988 5677777777765
No 75
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-39 Score=349.52 Aligned_cols=206 Identities=27% Similarity=0.426 Sum_probs=175.2
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccC---CCCCCCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQH---DVHIGEMT 214 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 214 (1326)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..+|||||. |+-| .+|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~f-P~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSF-PIT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCC-CcC
Confidence 5999999999999999999999999999999999999998 99999999988776666789999995 4444 479
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+|.+..+..-+. ..+ ....+ +.+..++++|+.+||.+.+|..+|
T Consensus 94 V~d~V~~g~~~~~--g~~---~~~~~-------------------------~d~~~v~~aL~~Vgm~~~~~r~i~----- 138 (254)
T COG1121 94 VKDVVLLGRYGKK--GWF---RRLNK-------------------------KDKEKVDEALERVGMEDLRDRQIG----- 138 (254)
T ss_pred HHHHHHccCcccc--ccc---ccccH-------------------------HHHHHHHHHHHHcCchhhhCCccc-----
Confidence 9999998732211 001 11111 113457889999999999987666
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||+|||-|||||+.+|++|+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.++||+|+.|++ +
T Consensus 139 ~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~ 215 (254)
T COG1121 139 ELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-H 215 (254)
T ss_pred ccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-e
Confidence 59999999999999999999999999999999999999999999999764 67777799999999999999999965 6
Q ss_pred EEEEcChhhHH
Q 046656 375 IVYQGPCELVL 385 (1326)
Q Consensus 375 iv~~G~~~~~~ 385 (1326)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 88999998875
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.4e-39 Score=343.05 Aligned_cols=196 Identities=28% Similarity=0.413 Sum_probs=168.2
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 209 (1326)
.++|+++|+.|++||+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999997 9999999988875542 3579999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
+|++||+||+.+++.+.+...+ +.....+.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999987766543210 11233567889999986655
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+.++..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++. .++++++++|+. ++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEEE
Confidence 2456689999999999999999999999999999999999999999999999764 456666678875 67789999999
Q ss_pred ecCCeE
Q 046656 370 LSDGQI 375 (1326)
Q Consensus 370 L~~G~i 375 (1326)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 77
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.5e-38 Score=369.46 Aligned_cols=217 Identities=24% Similarity=0.303 Sum_probs=186.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.+ ...+.+|+||||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788888776311 012469999999999999999999999999999999999887 46899999999864
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. ..++.+||++|+..+++..||+||+.|..... ..++.+.++++.++++.++|.+..|...+ .||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~~-----~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYPS-----NLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCC
Confidence 31 13567999999999999999999999875432 23455566778999999999988887753 699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 57788999999985 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 78
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-39 Score=336.33 Aligned_cols=217 Identities=26% Similarity=0.344 Sum_probs=180.1
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHDV 208 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 208 (1326)
..+++|+|||+.|++|||++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 5678999999999999999999999999999999999999988 9999999988765432 468999999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+.+.+||.+|+..+..-+. +.+..+ .++.+. +.+..+-..|+.+|+.+.+.++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~sl---------fglfsk---------------~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSL---------FGLFSK---------------EDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHH---------hCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998754221 111110 111111 11223455789999999888766
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+ .|||||+|||+|||||+.+|+++|-|||+++|||.++.++++.|++.+...+.|+| ..+|..+-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi-~nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVI-VNLHQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEE-EEechHHHHHHHHhhhe
Confidence 5 59999999999999999999999999999999999999999999999876555554 46777889999999999
Q ss_pred EecCCeEEEEcChhhHHH
Q 046656 369 LLSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~~ 386 (1326)
-|++|+|+|+||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988643
No 79
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-38 Score=352.98 Aligned_cols=213 Identities=25% Similarity=0.356 Sum_probs=180.5
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4667776652 2469999999999999999999999999999999999876 458999999987643
Q ss_pred ------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 891 ------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 891 ------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
..+++.++|++|++.+++.+||+||+.+...... ..+.++..+.++++++.++|.+..++.++ .|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYPA-----ELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 1245679999999988999999999988643221 22344445678899999999887777654 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57778999999985 78999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8874
No 80
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=370.44 Aligned_cols=215 Identities=26% Similarity=0.363 Sum_probs=187.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888877652 12469999999999999999999999999999999999877 46899999998864
Q ss_pred c-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 890 Q-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 890 ~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
. ...++.+|||+|+..++|.+||+||+.|+...+ ..++.+.+++++++++.++|.++.++.++ .|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKPR-----ELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHH
Confidence 3 223578999999999999999999999976432 23455556779999999999998888764 69999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++|||+. ++.+.+|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999986 68889999999985 799999986
Q ss_pred C
Q 046656 1048 G 1048 (1326)
Q Consensus 1048 ~ 1048 (1326)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 3
No 81
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3e-38 Score=369.74 Aligned_cols=215 Identities=25% Similarity=0.367 Sum_probs=188.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 477888887663 3469999999999999999999999999999999999877 4689999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.+++++++++.++|.++.++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 234578999999999999999999999986533 2345566678999999999999888775 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999986 78889999999996 79999998
Q ss_pred CC
Q 046656 1047 LG 1048 (1326)
Q Consensus 1047 ~~ 1048 (1326)
..
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 82
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5e-38 Score=365.99 Aligned_cols=215 Identities=26% Similarity=0.382 Sum_probs=187.3
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
..++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3588999987763 3569999999999999999999999999999999999887 458999999998
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 888 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 888 ~~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
... ...++.+||++|+..+++.+||+|++.|.+.+.. .+..+..+.++++++.++|.+..++.++ +||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHH
Confidence 643 2345679999999999999999999987654432 2333344567889999999988888774 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999986 68889999999986 7999999
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 83
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=368.36 Aligned_cols=215 Identities=24% Similarity=0.379 Sum_probs=189.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478889887763 3469999999999999999999999999999999999987 4689999999887
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
... ..+|.+|||+|+..++|.+||+||+.|+...+ ..++.+.+++++++++.++|.++.++.. ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 23578999999999999999999999986543 2345566778999999999999888775 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |+|+|++|||++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68889999999996 79999998
Q ss_pred CC
Q 046656 1047 LG 1048 (1326)
Q Consensus 1047 ~~ 1048 (1326)
..
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 84
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=371.45 Aligned_cols=208 Identities=24% Similarity=0.359 Sum_probs=179.9
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 213 (1326)
+.+.+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.+|||+|++.++|++
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~ 91 (356)
T PRK11650 15 GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHM 91 (356)
T ss_pred CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCC
Confidence 3457999999999999999999999999999999999999987 9999999998865443 47899999999999999
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||+||+.|+.+..+.. + .+....++++++.+||++..+ +.+
T Consensus 92 tv~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~-----~~~ 132 (356)
T PRK11650 92 SVRENMAYGLKIRGMP----------K------------------------AEIEERVAEAARILELEPLLD-----RKP 132 (356)
T ss_pred CHHHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhh-----CCh
Confidence 9999999986543210 0 011234677899999987766 455
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
+.|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|
T Consensus 133 ~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G 211 (356)
T PRK11650 133 RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGG 211 (356)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 689999999999999999999999999999999999999999999998653 3566777899999999999999999999
Q ss_pred eEEEEcChhhHH
Q 046656 374 QIVYQGPCELVL 385 (1326)
Q Consensus 374 ~iv~~G~~~~~~ 385 (1326)
+++..|+++++.
T Consensus 212 ~i~~~g~~~~~~ 223 (356)
T PRK11650 212 VAEQIGTPVEVY 223 (356)
T ss_pred EEEEECCHHHHH
Confidence 999999999874
No 85
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=368.98 Aligned_cols=209 Identities=23% Similarity=0.362 Sum_probs=181.0
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 212 (1326)
++.+.+|+|+|+.+++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||+
T Consensus 16 ~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ 92 (351)
T PRK11432 16 FGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPH 92 (351)
T ss_pred ECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCC
Confidence 34456899999999999999999999999999999999999998 9999999998876544 3789999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.|+.+.++... .+....++++++.+||.+..+ +.
T Consensus 93 ~tv~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~-----r~ 133 (351)
T PRK11432 93 MSLGENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFED-----RY 133 (351)
T ss_pred CCHHHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhc-----CC
Confidence 999999999865432210 012234677899999987665 45
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
++.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++
T Consensus 134 ~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~ 212 (351)
T PRK11432 134 VDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNK 212 (351)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 66899999999999999999999999999999999999999999999986533 55667789999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|+++..|+++++.
T Consensus 213 G~i~~~g~~~~~~ 225 (351)
T PRK11432 213 GKIMQIGSPQELY 225 (351)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999873
No 86
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3e-38 Score=369.68 Aligned_cols=209 Identities=27% Similarity=0.417 Sum_probs=180.8
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 212 (1326)
++.+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||+
T Consensus 14 ~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~ 90 (353)
T TIGR03265 14 FGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPN 90 (353)
T ss_pred eCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCC
Confidence 34456999999999999999999999999999999999999988 9999999998865443 4789999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.|+.+.++.. + .+....++++++.+||++..| +.
T Consensus 91 ~tv~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~L~~~~~-----~~ 131 (353)
T TIGR03265 91 LTVADNIAYGLKNRGMG----------R------------------------AEVAERVAELLDLVGLPGSER-----KY 131 (353)
T ss_pred CcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCCchhh-----CC
Confidence 99999999986533211 0 011234678899999998776 45
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++
T Consensus 132 ~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~ 210 (353)
T TIGR03265 132 PGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNH 210 (353)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 66899999999999999999999999999999999999999999999986533 55667789999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+++++.
T Consensus 211 G~i~~~g~~~~~~ 223 (353)
T TIGR03265 211 GVIEQVGTPQEIY 223 (353)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999884
No 87
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-38 Score=369.95 Aligned_cols=212 Identities=23% Similarity=0.345 Sum_probs=182.0
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCcee--eEEEECCccCCCCCc-cceEEEEccCCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVS--GRVTYNGHDMNEFVP-QRTAAYISQHDV 208 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~ 208 (1326)
++++.+.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ + |+|.++|.++....+ ++.++||+|+..
T Consensus 13 ~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~ 89 (362)
T TIGR03258 13 VAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYA 89 (362)
T ss_pred EEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcc
Confidence 3334456999999999999999999999999999999999999987 7 999999998865443 467999999999
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
++|.+||+||+.|+.+..+... .+....++++++.+||++..|.
T Consensus 90 l~p~~tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~-- 133 (362)
T TIGR03258 90 LFPHLKVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAH-- 133 (362)
T ss_pred cCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhC--
Confidence 9999999999999865432110 0112346778999999887764
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
.++.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|+
T Consensus 134 ---~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~ 210 (362)
T TIGR03258 134 ---LPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAG 210 (362)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEE
Confidence 45679999999999999999999999999999999999999999999998654325677778999999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+++++.
T Consensus 211 vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 211 IMKDGRLAAHGEPQALY 227 (362)
T ss_pred EEECCEEEEEcCHHHHH
Confidence 99999999999999884
No 88
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.4e-38 Score=367.84 Aligned_cols=215 Identities=25% Similarity=0.327 Sum_probs=188.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeE--EEEEEcCc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIS--GNITISGY 886 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 886 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 477888887763 2469999999999999999999999999999999999877 457 99999998
Q ss_pred cCCc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 887 PKKQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 887 ~~~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
+... ...++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.++.++ .||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~~-----~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLPA-----QLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCChh-----hCCHH
Confidence 7643 223567999999999999999999999976433 24455566779999999999998888764 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc--CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999998876 799999999986 67889999999985 79999
Q ss_pred EcCCC
Q 046656 1044 VGPLG 1048 (1326)
Q Consensus 1044 ~G~~~ 1048 (1326)
.|+..
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 89
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.3e-36 Score=400.14 Aligned_cols=216 Identities=23% Similarity=0.345 Sum_probs=187.2
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
..++++|+++.++. +++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|++
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46888998877631 23569999999999999999999999999999999999987 468999999988
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 888 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 888 ~~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++.++.++++++.++|.+..++.++ .||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHH
Confidence 743 2345679999999999999999999999776542 2334445678999999999988888764 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||||+||+||+.+|+||||||||+|||+.+++.+++.|++++ +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 5999999999986 57778999999996 7999999
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 85
No 90
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-38 Score=345.65 Aligned_cols=214 Identities=25% Similarity=0.338 Sum_probs=188.3
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+.++|++|.++. +..+|+|+|++|++||.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 578888888741 2579999999999999999999999999999999999987 45899999999854
Q ss_pred ----cccccceEEEeecCCCC-CCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 890 ----QETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ----~~~~~~~~gyv~Q~~~~-~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
...+++.+|||+|++.. +..-||.|.+.|+..- ...+.++.+++++++++.+++.+++++.. ..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRPP-----FNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCCc-----cccCC
Confidence 34567889999999755 4556999999998643 35566678889999999999999988775 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |.|||++|||.+ .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 799999999986 57788999999996 79999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 91
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.2e-39 Score=324.23 Aligned_cols=206 Identities=27% Similarity=0.362 Sum_probs=183.0
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCccc----ccceEEEeecCCCCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQET----FTRISGYCEQNDIHSP 908 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 908 (1326)
++++++++||+.|++||+|||+|||||||||.+.++.|+.. +.+|+|.+||.++.... .+.-+||+||+...|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45789999999999999999999999999999999999987 45999999999886533 2335899999999999
Q ss_pred CCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 046656 909 LVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 988 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 988 (1326)
.+||+||++-....+.. +....+++++++++|+.+++.+++++... .||||||+|+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999876655532 23344666778999999999999998753 5999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 989 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 989 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
++|+||-+...|++.++.+++.|.-|++|-|... |....|||.+++.+ |+++..|+++
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999987 78899999999996 7999999874
No 92
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-38 Score=343.93 Aligned_cols=210 Identities=29% Similarity=0.403 Sum_probs=176.6
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4667776652 2469999999999999999999999999999999999876 468999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 891 E-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 891 ~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
. ..++.++|++|++.+++.+|++||+.+..... .......++.++++++.+++.+..++.++ .||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYPH-----ELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHH
Confidence 2 23457899999998888899999998764322 12333445568899999999887777653 599999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999986 57788999999986 6777654
No 93
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-38 Score=332.24 Aligned_cols=217 Identities=28% Similarity=0.348 Sum_probs=179.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++.+|++..++... ....+|+||||+|.+||++||+|+||||||||.++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 467888877664321 11259999999999999999999999999999999999987 4699999999775
Q ss_pred Ccc----cccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 046656 889 KQE----TFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~~----~~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~ 961 (1326)
... .+++.+.+|+||+. +.|..||++.|.-.... ...++.++ ++.++++.+||.+- .++.. .+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~P-----~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRRP-----HE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcCc-----hh
Confidence 432 36788999999974 56889999988755432 23333333 38999999999753 34432 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||||||+||||||+.+|++|+||||||+||+..++.|+++|.++.++ |.|+|++|||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999865 889999999987 47778999999996 79
Q ss_pred EEEEcCCC
Q 046656 1041 EIYVGPLG 1048 (1326)
Q Consensus 1041 ~~~~G~~~ 1048 (1326)
++..++.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999864
No 94
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=328.05 Aligned_cols=241 Identities=25% Similarity=0.384 Sum_probs=206.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+++++|+.++ +++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|+|.++|.+.
T Consensus 2 ~L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~ 66 (300)
T COG4152 2 ALEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPL 66 (300)
T ss_pred ceEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcch
Confidence 35677777655 45789999999999999999999999999999999999987 5699999999998
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
++. .+.++||.|.+..+++.+||.|.|.|.|.+. .++.++.+..++.+|+.+++.......+. .||.|++|
T Consensus 67 ~~~-~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kIk-----~LSKGnqQ 137 (300)
T COG4152 67 SQE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKIK-----ELSKGNQQ 137 (300)
T ss_pred hhh-hhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchHH-----HhhhhhhH
Confidence 754 3457899999999999999999999999887 56778888889999999999998888874 69999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
++.+-.+++++|++++||||+|||||.+.+.+.+.+.+++++|.|||+++|++. .+.++||++++|++ |+.|.+|+.
T Consensus 138 KIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v- 214 (300)
T COG4152 138 KIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV- 214 (300)
T ss_pred HHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH-
Confidence 999999999999999999999999999999999999999999999999999986 78899999999986 688888987
Q ss_pred CChhhHHHHHhhcC----cchhhHHhhhccCcccc
Q 046656 1049 SNSSDLISYLQLMP----MHVTFIFMKAISGVEKI 1079 (1326)
Q Consensus 1049 ~~~~~~~~~f~~~~----~~~~~~~~~~~~g~~~~ 1079 (1326)
.++..-|..-. .....+.+..+||+.+.
T Consensus 215 ---~~ir~~~Gkk~~~ies~~s~eeL~~ipgi~~~ 246 (300)
T COG4152 215 ---EDIRRSFGKKRLVIESDLSLEELANIPGILKI 246 (300)
T ss_pred ---HHHHHhcCCceEEEeccCchHHHhcCCCceee
Confidence 34433232211 22233455677777544
No 95
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.6e-38 Score=361.51 Aligned_cols=202 Identities=28% Similarity=0.395 Sum_probs=177.4
Q ss_pred ceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCC
Q 046656 834 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ--ETFTRISGYCEQNDIHSPLVT 911 (1326)
Q Consensus 834 ~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~~T 911 (1326)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3579999999999999999999999999999999999877 458999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 991 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsg 991 (1326)
|+||+.+.+.++ ..+....++.++++++.++|.+..++.++ .||||||||++||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLY---GLPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 999999876543 22334445578999999999988887764 5999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 992 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 992 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 67788999999985 799999985
No 96
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=364.78 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=186.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66788877653 2469999999999999999999999999999999999877 45899999998864
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 890 QE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 890 ~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ..++.+|||+|+..++|.+||+||+.|....+.. ...+.++.+++++++++.++|.++.++.+. .||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHH
Confidence 32 2346799999999999999999999997643211 123445556789999999999988887763 6999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998865 899999999986 68889999999985 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 97
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-38 Score=344.16 Aligned_cols=207 Identities=28% Similarity=0.397 Sum_probs=182.2
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCC----CCCccceEEEEccC-CCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMN----EFVPQRTAAYISQH-DVHIG 211 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~-d~~~~ 211 (1326)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.++|. +|+|.++|.+.. ....++.+|||+|+ |..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999998865 22346789999999 56678
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
.-||.|.++|+.++.+... ++...+++.+++.+||.+..+ +
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLD-----R 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----C
Confidence 8899999999988776431 113345788899999998866 5
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+..|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++.. .++.++|.++|+.+.+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 6778999999999999999999999999999999999999999999999865 345677779999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 046656 372 DGQIVYQGPCELVLD 386 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~~ 386 (1326)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887753
No 98
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.1e-38 Score=314.90 Aligned_cols=196 Identities=27% Similarity=0.345 Sum_probs=172.6
Q ss_pred cceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHHHHH
Q 046656 840 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-ETFTRISGYCEQNDIHSPLVTVYESLLY 918 (1326)
Q Consensus 840 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f 918 (1326)
..+++|++||++||+||||||||||+|+|+|... +.+|+|.|||.+... ....|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 5677899999999999999999999999999887 459999999998654 3456778999999999999999999987
Q ss_pred HHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 046656 919 SAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 998 (1326)
Q Consensus 919 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~ 998 (1326)
+..-.+ ... .+.+++++.++..+||..+.+++.+ .||||||||+++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643222 222 3345679999999999999998865 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 999 IVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 999 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
.+..++.++.+ ++.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999874 5899999999998 88899999999996 799999986
No 99
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8.6e-38 Score=367.35 Aligned_cols=219 Identities=26% Similarity=0.378 Sum_probs=185.1
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 214 (1326)
.+++|+|+|+.+++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ +|.++||+|++.+||++|
T Consensus 26 ~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 102 (375)
T PRK09452 26 GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMT 102 (375)
T ss_pred CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCC
Confidence 456899999999999999999999999999999999999987 9999999998865443 477999999999999999
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.|+.+.++... .+....++++++.+||++..+. ++.
T Consensus 103 v~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~-----~p~ 143 (375)
T PRK09452 103 VFENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQR-----KPH 143 (375)
T ss_pred HHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhC-----Chh
Confidence 9999999865332110 0112245778999999877664 556
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+
T Consensus 144 ~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 144 QLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 899999999999999999999999999999999999999999999987643 5666778999999999999999999999
Q ss_pred EEEEcChhhHHHHHHhcCCCCCCCCChHHHH
Q 046656 375 IVYQGPCELVLDFFESMGFKCPERKSVADFL 405 (1326)
Q Consensus 375 iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l 405 (1326)
++..|+++++. ..|.....++|+
T Consensus 223 i~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 223 IEQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEEcCHHHHH--------hCcccHHHHHhc
Confidence 99999998873 345544445544
No 100
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-37 Score=342.67 Aligned_cols=200 Identities=27% Similarity=0.392 Sum_probs=173.0
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYE 914 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E 914 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999876 458999999987642 3567899999998888899999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 915 SLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 915 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
|+.+....+ ........+.++++++.+++.+..++.++ .||||||||++|||||+.+|++|||||||+|||+
T Consensus 93 ~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYPH-----QLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 998865433 12333445678899999999887777653 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEec-CcEEEEEcCC
Q 046656 995 RAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1047 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gg~~~~~G~~ 1047 (1326)
.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999864 4899999999986 57788999999985 4899888764
No 101
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.1e-37 Score=362.27 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=177.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 210 (1326)
+++|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998865432 45799999999999
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.|+....+... .+....+.++++.+||++..|
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~----- 135 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHD----- 135 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhh-----
Confidence 99999999998765432110 011223567899999988766
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
..+..|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|+++.+.. +.+|+.++|..+.+.++||+|++|
T Consensus 136 ~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 136 SYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4456799999999999999999999999999999999999999999999987643 456666899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998873
No 102
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-37 Score=343.49 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=174.8
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++. +.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 467888776631 12469999999999999999999999999999999999876 45899999998753
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. .+++.++|++|++.+++.+||.||+.+....+ ....+..++.++++++.+++.+..++.++ .||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALPM-----QLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCC
Confidence 21 13567999999998888999999998865432 12333445678999999999887777653 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999998777999999999986 566789999999864
No 103
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.9e-37 Score=364.50 Aligned_cols=214 Identities=23% Similarity=0.327 Sum_probs=187.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899987763 2469999999999999999999999999999999999887 4689999999886
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.++.++.+. .||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHH
Confidence 43 223577999999999999999999999975433 23445556678999999999998888763 6999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999986 68889999999985 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 104
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-36 Score=378.98 Aligned_cols=213 Identities=27% Similarity=0.419 Sum_probs=178.4
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY 886 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 886 (1326)
+-.++|+||+|.|+. ++..+|+|+|++|+|||.+||+|+||||||||+|+|.|+.+ +..|+|++||+
T Consensus 469 ~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg~ 535 (709)
T COG2274 469 QGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDGV 535 (709)
T ss_pred CceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 447999999998853 22469999999999999999999999999999999999987 56999999999
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-------cccccccC
Q 046656 887 PKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-------LRQSLVGL 956 (1326)
Q Consensus 887 ~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~vg~ 956 (1326)
++++ ..+|+.+|||+|++.++. -|++||+.++. .+.+. +.+.++++..+..+ -.|+.+|.
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATD----EEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCH----HHHHHHHHHhCcHHHHHhccccccccccc
Confidence 8754 567899999999988765 59999998753 22232 23445555555433 24566665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
. +.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.+.. +|+|+|+++|+++ ..+.+|+|++|+
T Consensus 606 ~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl~ 681 (709)
T COG2274 606 G-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVLD 681 (709)
T ss_pred C-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEcc
Confidence 4 45899999999999999999999999999999999999999999999976 4899999999985 678999999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 682 ~-Gkiv~~gs~ 691 (709)
T COG2274 682 Q-GKIVEQGSH 691 (709)
T ss_pred C-CceeccCCH
Confidence 5 799999996
No 105
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=343.22 Aligned_cols=212 Identities=29% Similarity=0.381 Sum_probs=179.8
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 4667776552 3469999999999999999999999999999999999876 458999999987532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 891 --ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 891 --~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
...++.++|++|+..+++.+||+|++.+....+ ..+.++.++.++++++.++|.+..++.++ .|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLVK-----TYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCChh-----hCCHHHHH
Confidence 223457899999998889999999998865433 12333345568999999999887777654 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999998876 899999999986 57778999999986 788888764
No 106
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.1e-37 Score=358.06 Aligned_cols=214 Identities=27% Similarity=0.382 Sum_probs=183.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 477888887763 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
.. ...++.+||++|+..+++.+||+|++.+.+... ..+.....+.++++++.++|.+..++.++ .|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHH
Confidence 32 224567999999998888999999998755432 12333444567889999999888777764 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 79999997
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 107
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.3e-37 Score=359.17 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=180.2
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVH 209 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 209 (1326)
++++.+.+|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++.+
T Consensus 15 k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~ 91 (306)
T PRK13537 15 KRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNL 91 (306)
T ss_pred EEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcC
Confidence 3344567999999999999999999999999999999999999998 999999999875432 24679999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.|.++..+... .+....++++++.+||.+..++.+
T Consensus 92 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 136 (306)
T PRK13537 92 DPDFTVRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKV- 136 (306)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCch-
Confidence 999999999998665433210 001123567889999988877655
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
++|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++.. .+++|+.++|..+++.++||+|++
T Consensus 137 ----~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~i 210 (306)
T PRK13537 137 ----GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCV 210 (306)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEE
Confidence 46999999999999999999999999999999999999999999999854 356777789999999999999999
Q ss_pred ecCCeEEEEcChhhHHH
Q 046656 370 LSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~ 386 (1326)
|++|++++.|+++++..
T Consensus 211 l~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 211 IEEGRKIAEGAPHALIE 227 (306)
T ss_pred EECCEEEEECCHHHHHh
Confidence 99999999999998754
No 108
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=362.96 Aligned_cols=214 Identities=25% Similarity=0.363 Sum_probs=187.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588899987663 2469999999999999999999999999999999999987 4589999999876
Q ss_pred Cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQ-ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ...+|.+|||+|+..++|.+||.||+.|+...+ ..+..+.+++++++++.++|.++.++.+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999975433 2345556677999999999998888775 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ .|.|+|++|||+. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 78899999999985 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 109
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-37 Score=339.97 Aligned_cols=209 Identities=25% Similarity=0.428 Sum_probs=176.9
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4667766552 2469999999999999999999999999999999999876 468999999987643
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 046656 891 ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRL 970 (1326)
Q Consensus 891 ~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl 970 (1326)
..++.++|++|+..+++.+|++||+.+....+ .......++.++++++.+++.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLK---GLKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHc---CCChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 34567899999998888899999998865433 1233344556889999999988777665 36999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 971 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 971 ~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 56778999999986 6777654
No 110
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.5e-37 Score=340.09 Aligned_cols=210 Identities=27% Similarity=0.394 Sum_probs=177.4
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 4677776653 2469999999999999999999999999999999999876 468999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 891 E-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 891 ~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..++ .||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKPK-----QLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCChh-----hCCHHHHHH
Confidence 2 22457999999998888899999998864332 12334445568899999999887777654 599999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999986 57778999999986 6888765
No 111
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2e-37 Score=361.68 Aligned_cols=209 Identities=20% Similarity=0.290 Sum_probs=180.4
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQH 206 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 206 (1326)
++.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+
T Consensus 3 ~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~ 79 (363)
T TIGR01186 3 TGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQ 79 (363)
T ss_pred cCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECC
Confidence 34567999999999999999999999999999999999999997 9999999999876543 4679999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
+.+++++||+||+.|+.+..+... .+....+.++++.+||+...+.
T Consensus 80 ~~l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~ 125 (363)
T TIGR01186 80 FALFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHR 125 (363)
T ss_pred CcCCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhC
Confidence 999999999999999765443210 0112245678999999876664
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.+..|||||||||+|||||+.+|+++||||||+|||+.++.++.+.++++.+. .+.+|+.++|+..++..++|+
T Consensus 126 -----~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~dr 199 (363)
T TIGR01186 126 -----YPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDR 199 (363)
T ss_pred -----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 45579999999999999999999999999999999999999999999988553 355677789999999999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|++|+++..|+++++.
T Consensus 200 I~vl~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 200 IVIMKAGEIVQVGTPDEIL 218 (363)
T ss_pred EEEEeCCEEEeeCCHHHHH
Confidence 9999999999999999875
No 112
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.1e-37 Score=314.16 Aligned_cols=200 Identities=26% Similarity=0.381 Sum_probs=177.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 210 (1326)
..+|+|||+.|++||++.|+||||||||||||.|.+...|+ .|+|.+||+++.... .+|++|+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 55999999999999999999999999999999999999998 999999999986543 258899999999999
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
++.||.||++|+.+..|... .+.+..+.++|+.+||.+.++
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~----- 132 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKAR----- 132 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhh-----
Confidence 99999999999988765422 123445778899999998876
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
..+..|||||||||+||||++.+|++|+-||||..||+..+.+|++.+.++.. .||+|++.+|+..-+..+-.+++.|
T Consensus 133 ~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 133 ALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred cCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 45678999999999999999999999999999999999999999999999854 4788888899998888888999999
Q ss_pred cCCeEEEEcC
Q 046656 371 SDGQIVYQGP 380 (1326)
Q Consensus 371 ~~G~iv~~G~ 380 (1326)
++|+++.+..
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 113
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.8e-37 Score=360.56 Aligned_cols=204 Identities=25% Similarity=0.300 Sum_probs=179.4
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc---cc----cceEEEeecCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE---TF----TRISGYCEQNDI 905 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~ 905 (1326)
+.+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34569999999999999999999999999999999999987 4699999999887532 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 046656 906 HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 985 (1326)
Q Consensus 906 ~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illL 985 (1326)
+++.+||+||+.|...+. ..+.++..+++.++++.++|.+..++.++ .|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 23455666789999999999888887764 5999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 986 DEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 986 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
||||++||+.++..+++.++++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999998754 899999999986 57888999999985 7999999753
No 114
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=361.33 Aligned_cols=217 Identities=24% Similarity=0.302 Sum_probs=184.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|++++++.. ..++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678888776411 013569999999999999999999999999999999999887 46899999998864
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. ..++.+||++|+..+++.+||+||+.+....+ ..+..+.++.++++++.++|.+..++.++ .||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYPA-----QLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCC
Confidence 31 13567999999999999999999999875433 23344445678999999999888777653 699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999986 57788999999985 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99975
No 115
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.6e-37 Score=344.47 Aligned_cols=215 Identities=28% Similarity=0.368 Sum_probs=179.3
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4567766552 2469999999999999999999999999999999999876 458999999987643
Q ss_pred cc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046656 891 ET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTE-------VDSETRKMFIEEIMELVELKPLRQSLVGLPGE 959 (1326)
Q Consensus 891 ~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 959 (1326)
.. .++.++|++|++.+++.+||+|++.+......... .......+.++++++.+++.+..++.++
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 142 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAG---- 142 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChh----
Confidence 21 23458999999999999999999988654321110 1123345568899999999887776653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 -~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 143 -ELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 59999999999999999999999999999999999999999999998877999999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888874
No 116
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-37 Score=363.97 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=185.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887663 3469999999999999999999999999999999999877 4589999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
... ..++.+||++|+..+++.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.++ .||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~~-----~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKPK-----ALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHH
Confidence 432 23467999999999999999999999876433 22344555678999999999988887764 5999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++|||++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67888999999995 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 117
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9e-38 Score=311.64 Aligned_cols=201 Identities=22% Similarity=0.356 Sum_probs=172.8
Q ss_pred ceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 046656 142 DVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEMTVRETLA 220 (1326)
Q Consensus 142 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 220 (1326)
.+++.+++||+++|+|||||||||||+.|+|...|. +|+|.+||.+.....| +|.++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478889999999999999999999999999999998 9999999999876555 578999999999999999999999
Q ss_pred hhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhh
Q 046656 221 FSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQ 300 (1326)
Q Consensus 221 f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 300 (1326)
++.. ++-+ +.. +..+.++.++..+||..+.+. .+..|||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~R-----LP~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKR-----LPGELSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhh-----CccccCchH
Confidence 8743 1111 111 112346778999999988774 456799999
Q ss_pred hHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEcC
Q 046656 301 KKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 380 (1326)
Q Consensus 301 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 380 (1326)
||||++||+|+++.+|++||||+|+|||.-+.+....+.+++...+ .|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~-~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERK-MTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 9999999999999999999999999999999999999999987654 555557777789999999999999999999999
Q ss_pred hhhHH
Q 046656 381 CELVL 385 (1326)
Q Consensus 381 ~~~~~ 385 (1326)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 118
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.9e-37 Score=340.88 Aligned_cols=215 Identities=28% Similarity=0.433 Sum_probs=179.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4677887766311 011269999999999999999999999999999999999876 45899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 890 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 890 ~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..++.++ .||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRVG-----GFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhhh-----hcCHHHH
Confidence 3 234567999999998888899999998765432 22344445678999999999887777654 5999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6777644
No 119
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-37 Score=343.24 Aligned_cols=217 Identities=27% Similarity=0.391 Sum_probs=181.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887663 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
... ..++.++|++|++.+++.+||.||+.+....+.. .........+.++++++.++|.+..++.++ .|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPA-----QLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHH
Confidence 432 2245689999999888889999999886543211 001223334568899999999877777653 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999998765 899999999986 57788999999985 7899988
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 120
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.1e-37 Score=364.36 Aligned_cols=218 Identities=26% Similarity=0.358 Sum_probs=185.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 367888887663 3579999999999999999999999999999999999877 4689999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.+||++|+..+++.+||+|++.++..... .........++.++++++.+++.+..++.+. .|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~-----~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVT-----SLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 43 2356779999999999899999999988542111 0111122344678999999999988888764 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||+.|||||+++|++|||||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 67789999999985 799999
Q ss_pred cCCC
Q 046656 1045 GPLG 1048 (1326)
Q Consensus 1045 G~~~ 1048 (1326)
|+.+
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9864
No 121
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=361.63 Aligned_cols=213 Identities=27% Similarity=0.363 Sum_probs=179.6
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 212 (1326)
++.+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.++++
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~ 88 (353)
T PRK10851 12 FGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRH 88 (353)
T ss_pred eCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCC
Confidence 33456999999999999999999999999999999999999987 9999999998865433 3679999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.|+.+....... ..+ .+....++++++.+||++..| ++
T Consensus 89 ~tv~eni~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~L~~~~~-----~~ 133 (353)
T PRK10851 89 MTVFDNIAFGLTVLPRRER------PNA------------------------AAIKAKVTQLLEMVQLAHLAD-----RY 133 (353)
T ss_pred CcHHHHHHhhhhhcccccC------CCH------------------------HHHHHHHHHHHHHcCCchhhh-----CC
Confidence 9999999997653210000 000 011234677899999987665 45
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+. .+.+++.++|+..++..++|+|++|++
T Consensus 134 ~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~ 212 (353)
T PRK10851 134 PAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQ 212 (353)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6689999999999999999999999999999999999999999999998653 356677789999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+++++.
T Consensus 213 G~i~~~g~~~~i~ 225 (353)
T PRK10851 213 GNIEQAGTPDQVW 225 (353)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999884
No 122
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.5e-37 Score=354.66 Aligned_cols=213 Identities=26% Similarity=0.392 Sum_probs=184.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~ 66 (301)
T TIGR03522 2 SIRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDV 66 (301)
T ss_pred EEEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 367788877663 3569999999999999999999999999999999999876 4689999999876
Q ss_pred Cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
.. ...++.+||++|++.+++.+||.||+.|.+.++ ..+.++..+.++++++.++|.+..++.++ .|||||
T Consensus 67 ~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~ 138 (301)
T TIGR03522 67 LQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIY---GMKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGY 138 (301)
T ss_pred ccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHH
Confidence 43 234567999999999999999999999876543 22334445568999999999988887764 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||++||+||+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~ 215 (301)
T TIGR03522 139 RQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKK 215 (301)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999865 799999999986 68889999999985 79999998
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 216 ~ 216 (301)
T TIGR03522 216 L 216 (301)
T ss_pred H
Confidence 6
No 123
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.9e-37 Score=342.46 Aligned_cols=212 Identities=27% Similarity=0.375 Sum_probs=179.2
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4667776552 3469999999999999999999999999999999999876 468999999987542
Q ss_pred c---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 891 E---T-FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 891 ~---~-~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
. . .++.++|++|++.+++.+|++||+.+....+ ........+.++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIR---GLSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 2346899999999999999999998764332 1223344456889999999988777665 3699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999998877999999999986 68888999999985 78888887
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 124
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-37 Score=363.20 Aligned_cols=208 Identities=23% Similarity=0.335 Sum_probs=179.4
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 213 (1326)
+.+.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.+|||+|++.+||++
T Consensus 30 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~l 106 (377)
T PRK11607 30 DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHM 106 (377)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCC
Confidence 3456999999999999999999999999999999999999988 9999999998865433 47899999999999999
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||+||+.|+.+.++.. + .+....++++++.+||.+..+ ..+
T Consensus 107 tv~eNi~~~l~~~~~~----------~------------------------~~~~~~v~~~l~~l~L~~~~~-----~~~ 147 (377)
T PRK11607 107 TVEQNIAFGLKQDKLP----------K------------------------AEIASRVNEMLGLVHMQEFAK-----RKP 147 (377)
T ss_pred CHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhc-----CCh
Confidence 9999999976543211 0 011234677899999987665 456
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
.+|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|
T Consensus 148 ~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G 226 (377)
T PRK11607 148 HQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRG 226 (377)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCC
Confidence 6899999999999999999999999999999999999999999999886544 466677899999999999999999999
Q ss_pred eEEEEcChhhHH
Q 046656 374 QIVYQGPCELVL 385 (1326)
Q Consensus 374 ~iv~~G~~~~~~ 385 (1326)
+++..|+++++.
T Consensus 227 ~i~~~g~~~~~~ 238 (377)
T PRK11607 227 KFVQIGEPEEIY 238 (377)
T ss_pred EEEEEcCHHHHH
Confidence 999999999874
No 125
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.4e-37 Score=339.46 Aligned_cols=207 Identities=29% Similarity=0.397 Sum_probs=172.1
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++.. ...+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 567777665310 011569999999999999999999999999999999999876 468999999987643
Q ss_pred cc-------ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 891 ET-------FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 891 ~~-------~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.++|.+..++.++ .||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYPS-----ELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcChh-----hcC
Confidence 11 23579999999999999999999998654331 2233344568899999999887776653 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++ +.+|++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999976 5899999999986 34 489999999864
No 126
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.9e-38 Score=373.97 Aligned_cols=213 Identities=28% Similarity=0.448 Sum_probs=181.2
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
-.|+|+||+++|+.. ++.++|+|+||+|+|||.||||||||+||||+.++|.+.+. |.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 379999999999864 34679999999999999999999999999999999999877 569999999999
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH-------cCCcccccccccCC
Q 046656 888 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMEL-------VELKPLRQSLVGLP 957 (1326)
Q Consensus 888 ~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~-------l~l~~~~~~~vg~~ 957 (1326)
+++ ..+++++|+|.|++.++. -||+|||.|+.. +.+.++ ++++.++ .++.+-.|+.+|..
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVGEK 601 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccCCc
Confidence 764 456789999999999986 599999999753 333332 2222222 24556678889876
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
|. .||||||||++|||||++||+||||||+||.||+++...|+++|.+..+ ++|||+++|+.+ ..+.+|+|+++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 54 6999999999999999999999999999999999999999999998875 699999999976 5688999999986
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|..
T Consensus 678 -G~V~E~G~h 686 (716)
T KOG0058|consen 678 -GRVVEMGTH 686 (716)
T ss_pred -CeEEecccH
Confidence 799999975
No 127
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.1e-37 Score=337.07 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=174.7
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4667766552 2469999999999999999999999999999999999876 468999999987643
Q ss_pred -ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 891 -ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 891 -~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
...++.++|++|++.+++..||+||+.+....+. . .++.++++++.+++.+..++.++ .||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKVK-----GFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhHh-----hCCHHHHHH
Confidence 2335678999999988889999999988654321 1 13457889999999887777653 599999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877899999999986 56678999999986 6887754
No 128
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.6e-37 Score=341.38 Aligned_cols=213 Identities=24% Similarity=0.294 Sum_probs=176.2
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCC-----CCCeeEEEEEEcC
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYISGNITISG 885 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g 885 (1326)
+++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4667766552 246999999999999999999999999999999999987 5 4689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGES 960 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 960 (1326)
.++.. ..+++.+||++|++.++ .+||+||+.+....+. .......+++++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 22456799999998877 7899999988654331 11122234568899999999876665420 24
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||+++ ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 69999999999999999999999999999999999999999999999876 99999999986 57778999999986 78
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9998875
No 129
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-37 Score=341.20 Aligned_cols=217 Identities=24% Similarity=0.318 Sum_probs=181.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677887765310 001269999999999999999999999999999999999877 46899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999989999999988654331 233344556889999999988777765 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 56778999999985 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 130
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-37 Score=346.92 Aligned_cols=203 Identities=26% Similarity=0.307 Sum_probs=173.8
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc---c----ccceEEEeecCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE---T----FTRISGYCEQNDI 905 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 905 (1326)
+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 45679999999999999999999999999999999999876 4589999999876421 1 1356899999998
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 046656 906 HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 985 (1326)
Q Consensus 906 ~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illL 985 (1326)
+++.+||+||+.+..... ........+.++++++.++|.+..++.++ .||||||||++|||||+.+|+||||
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888999999998865332 12233445568899999999888777764 5999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 986 DEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 986 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 57788999999985 788998875
No 131
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=7.6e-37 Score=336.57 Aligned_cols=206 Identities=26% Similarity=0.349 Sum_probs=173.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46777777652 12469999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. .+++.++|++|++.+++.+|++||+.+....+ .......++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 23567899999998888899999998865432 1223344567889999999987766665 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 677789999999864
No 132
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=325.52 Aligned_cols=205 Identities=26% Similarity=0.309 Sum_probs=177.4
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC----ccceEEEEccCC--CCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV----PQRTAAYISQHD--VHIG 211 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 211 (1326)
++|+|||+++.+||.++|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+|++ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999998 999999998776542 346799999985 4678
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
..||++.|.-+.+..+.++ ....+.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----hc
Confidence 8999999987665433211 1112567899999986443 46
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+..|||||||||+|||||+.+|++|++|||||+||++.+.+|++.|.++.+. .+.+++.++|+..-+..+||||+||+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeee
Confidence 78899999999999999999999999999999999999999999999998764 56778889999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 046656 372 DGQIVYQGPCELVLD 386 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~~ 386 (1326)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998853
No 133
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-37 Score=343.71 Aligned_cols=204 Identities=29% Similarity=0.336 Sum_probs=171.1
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------TFTRISGYCEQNDIHSP 908 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~ 908 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999876 4589999999876421 23567899999998888
Q ss_pred CCCHHHHHHHHHHhh-----ccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEE
Q 046656 909 LVTVYESLLYSAWLR-----LRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSII 983 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~il 983 (1326)
.+||+||+.+..... ...........+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 899999998753210 0001111233456888999999987776655 369999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 984 FMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 984 lLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999998764 899999999987 57778999999985 789998875
No 134
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=327.20 Aligned_cols=226 Identities=28% Similarity=0.368 Sum_probs=191.9
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc----ceEEEEc
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ----RTAAYIS 204 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 204 (1326)
.++++.+...+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|.+++...+. .-++--+
T Consensus 9 ~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTF 85 (250)
T COG0411 9 GLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTF 85 (250)
T ss_pred cceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeec
Confidence 4567778889999999999999999999999999999999999999998 99999999999877654 3467889
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|...+|++|||.||+..++..+.. +.......+ ...+..+....+..+|+.+||.+.+
T Consensus 86 Q~~rlF~~lTVlENv~va~~~~~~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a 143 (250)
T COG0411 86 QITRLFPGLTVLENVAVGAHARLG---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELA 143 (250)
T ss_pred ccccccCCCcHHHHHHHHhhhhhh---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhh
Confidence 999999999999999998764421 000000000 0001123345577899999999999
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
|+..| +||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ .++.+|+.|-|+++-+..+|
T Consensus 144 ~~~A~-----~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~ 217 (250)
T COG0411 144 DRPAG-----NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLA 217 (250)
T ss_pred cchhh-----cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhc
Confidence 98777 4999999999999999999999999999999999999999999999865 35678888999999999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|||+||+.|+++.+|+++++.
T Consensus 218 dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 218 DRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred cEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999986
No 135
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-36 Score=340.85 Aligned_cols=214 Identities=22% Similarity=0.341 Sum_probs=180.7
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46777776652 2469999999999999999999999999999999999876 46899999998764
Q ss_pred c-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 890 Q-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
. ...++.++|++|+..+++.+||+||+.+..... .........+.+.++++.+++.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV--RGASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 123567899999998888899999998754211 12233444566889999999987777665 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999998877999999999986 56778999999985 799999
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 136
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-37 Score=341.47 Aligned_cols=209 Identities=28% Similarity=0.357 Sum_probs=173.9
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHD 207 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d 207 (1326)
++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~ 86 (235)
T cd03261 10 FGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSG 86 (235)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCc
Confidence 34457999999999999999999999999999999999999987 999999998875432 245799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++.+||+||+.++........ . .+....++.+++.+||++..++
T Consensus 87 ~~~~~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~- 132 (235)
T cd03261 87 ALFDSLTVFENVAFPLREHTRLS---------E------------------------EEIREIVLEKLEAVGLRGAEDL- 132 (235)
T ss_pred ccCCCCcHHHHHHHHHhhccCCC---------H------------------------HHHHHHHHHHHHHcCCchhhcC-
Confidence 88999999999998643210000 0 0011235667899999776654
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+.+++.++||+|
T Consensus 133 ----~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v 207 (235)
T cd03261 133 ----YPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRI 207 (235)
T ss_pred ----ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEE
Confidence 44579999999999999999999999999999999999999999999998653 3456677889999999999999
Q ss_pred EEecCCeEEEEcChhhH
Q 046656 368 ILLSDGQIVYQGPCELV 384 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~ 384 (1326)
++|++|++++.|+++++
T Consensus 208 ~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 208 AVLYDGKIVAEGTPEEL 224 (235)
T ss_pred EEEECCeEEEecCHHHH
Confidence 99999999999998765
No 137
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.4e-36 Score=337.05 Aligned_cols=221 Identities=38% Similarity=0.622 Sum_probs=180.5
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC-CeeEEEEEEcCccC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYISGNITISGYPK 888 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 888 (1326)
+.|+|+++.++.. +..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577887766311 0135799999999999999999999999999999999998651 13589999999877
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEE-IMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.....++.++|++|++.+++.+||+||+.|..................+++ .++.+++.++.++.+ ..||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544456779999999999999999999998754432222122222334555 899999987776655 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999984468889999999986 7888765
No 138
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.3e-37 Score=336.01 Aligned_cols=192 Identities=29% Similarity=0.387 Sum_probs=163.6
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCC-CCCCCCHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDI-HSPLVTVY 913 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~~Tv~ 913 (1326)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999876 468999999987644344567999999974 34467999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 046656 914 ESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 993 (1326)
Q Consensus 914 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD 993 (1326)
||+.+..... . . ..+.++++++.+++.+..++.++ .||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 12457899999999988777653 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 994 ARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 994 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999998777999999999986 56678999999986 5653
No 139
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.93 Aligned_cols=218 Identities=22% Similarity=0.311 Sum_probs=180.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... ...+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67888887764110 012469999999999999999999999999999999999877 46899999998864
Q ss_pred cc-----cccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 046656 890 QE-----TFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK--PLRQSLVGLPGESG 961 (1326)
Q Consensus 890 ~~-----~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~vg~~~~~~ 961 (1326)
.. ..++.+||++|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..++.+ ..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 31 34567999999863 334579999999865322 344555566789999999997 5566654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 56778999999986 79
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999975
No 140
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.7e-36 Score=341.99 Aligned_cols=214 Identities=26% Similarity=0.354 Sum_probs=180.5
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887663 2469999999999999999999999999999999999876 45899999998753
Q ss_pred c-----------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046656 890 Q-----------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPG 958 (1326)
Q Consensus 890 ~-----------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 958 (1326)
. ...++.++|++|++.+++..|++||+.+...... ........+.++++++.+++.+..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1234578999999988888999999987542111 2233344566889999999987776655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 369999999999999999999999999999999999999999999998877999999999986 57788999999986
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789998874
No 141
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-37 Score=360.12 Aligned_cols=209 Identities=25% Similarity=0.390 Sum_probs=178.0
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 212 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.
T Consensus 13 ~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~ 89 (369)
T PRK11000 13 YGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPH 89 (369)
T ss_pred eCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCC
Confidence 33456999999999999999999999999999999999999987 9999999998765433 4679999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.|+.+..+.. + .+....++++++.+||++..+. .
T Consensus 90 ~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~lgL~~~~~~-----~ 130 (369)
T PRK11000 90 LSVAENMSFGLKLAGAK----------K------------------------EEINQRVNQVAEVLQLAHLLDR-----K 130 (369)
T ss_pred CCHHHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcC-----C
Confidence 99999999976533210 0 0112235678999999876664 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..+||+|++|++
T Consensus 131 ~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~ 209 (369)
T PRK11000 131 PKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDA 209 (369)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999986533 55667789999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|+++..|+++++.
T Consensus 210 G~i~~~g~~~~i~ 222 (369)
T PRK11000 210 GRVAQVGKPLELY 222 (369)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999998874
No 142
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.6e-37 Score=352.73 Aligned_cols=208 Identities=26% Similarity=0.351 Sum_probs=177.5
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 212 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 3457999999999999999999999999999999999999988 999999998875321 23579999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.|.++..+... .+....++++++.+||++..++.+
T Consensus 81 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 122 (302)
T TIGR01188 81 LTGRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPV---- 122 (302)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCch----
Confidence 999999998765433110 001123567899999987777554
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++.+ .+++|+.++|..+++.++||+|++|++
T Consensus 123 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 123 -GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE--EGVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 56999999999999999999999999999999999999999999999864 256677789999999999999999999
Q ss_pred CeEEEEcChhhHHH
Q 046656 373 GQIVYQGPCELVLD 386 (1326)
Q Consensus 373 G~iv~~G~~~~~~~ 386 (1326)
|++++.|+++++.+
T Consensus 200 G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 200 GRIIAEGTPEELKR 213 (302)
T ss_pred CEEEEECCHHHHHH
Confidence 99999999988754
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.1e-36 Score=336.80 Aligned_cols=213 Identities=26% Similarity=0.394 Sum_probs=178.5
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 46677766531 11469999999999999999999999999999999999876 468999999987643
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 891 --ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 891 --~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
...++.++|++|+..+++..|++||+.+....+. .+.....+.++++++.++|.+..++.++ .||+||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRAR-----TLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChhh-----hCCHHHHH
Confidence 2345679999999988889999999988654331 2333344568899999999877776653 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 699999999986 56678999999985 788888874
No 144
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=341.23 Aligned_cols=212 Identities=27% Similarity=0.363 Sum_probs=178.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 45677776652 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 890 QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 890 ~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
. ..+.+||++|+..+++..||.||+.+....+ .....+..+.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998764332 2233444556899999999987777654 3699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEec-CcEEEEEcCC
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1047 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gg~~~~~G~~ 1047 (1326)
++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999985 5899888764
No 145
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=336.75 Aligned_cols=217 Identities=25% Similarity=0.323 Sum_probs=179.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++.. ...+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37888998876311 011469999999999999999999999999999999999876 4689999999876
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046656 889 KQET------F-TRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~~~------~-~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 961 (1326)
.... . ++.++|++|+..+++.+|++||+.+....+ ....++.+++++++++.++|.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 1 256899999998888899999998865432 1233344567899999999988777665 36
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999986 34 45689999985 79
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998875
No 146
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.5e-37 Score=343.89 Aligned_cols=218 Identities=26% Similarity=0.284 Sum_probs=178.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45677776552 12459999999999999999999999999999999999876 46899999998754
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhh-----ccCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLR-----LRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPG 958 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 958 (1326)
.. .+++.+||++|+..+++.+||+||+.+..... ..........+++++++++.+++.+..++.+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 21 23567999999998888899999997642110 0001112233456889999999987777665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 369999999999999999999999999999999999999999999998754 899999999986 56778999999985
Q ss_pred CcEEEEEcCCC
Q 046656 1038 GGQEIYVGPLG 1048 (1326)
Q Consensus 1038 gg~~~~~G~~~ 1048 (1326)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 7889888753
No 147
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-36 Score=334.99 Aligned_cols=193 Identities=27% Similarity=0.375 Sum_probs=166.4
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------cccceEEEeecCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------TFTRISGYCEQNDIHSP 908 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~ 908 (1326)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999876 4689999999876421 24567999999999999
Q ss_pred CCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 046656 909 LVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 988 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 988 (1326)
.+|++||+.+....+. ...+..++.++++++.+++.+..++.+ .+||||||||++|||+|+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654321 233444556889999999988777665 36999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 989 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 989 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
|+|||+.++..+.+.|+++.++|+|||++||++. .+.+.+|++++|++|
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999998777999999999986 566789999999864
No 148
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.1e-36 Score=354.76 Aligned_cols=214 Identities=25% Similarity=0.349 Sum_probs=180.7
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccC
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQH 206 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~ 206 (1326)
+++++++++.+|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+||++|+
T Consensus 46 nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~ 122 (340)
T PRK13536 46 GVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQF 122 (340)
T ss_pred EEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCC
Confidence 3344445567999999999999999999999999999999999999998 999999999875432 24679999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
+.+++.+||+||+.|.....+... .+....++.+++.+||++..++
T Consensus 123 ~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~ 168 (340)
T PRK13536 123 DNLDLEFTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADA 168 (340)
T ss_pred ccCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCC
Confidence 999999999999997554432100 0011234567889999887776
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.++ +|||||||||+||+||+.+|++++|||||+|||+.++.++++.|+++.. .+++|+.++|..+++.++||+
T Consensus 169 ~~~-----~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~ 241 (340)
T PRK13536 169 RVS-----DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDR 241 (340)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCE
Confidence 554 6999999999999999999999999999999999999999999999864 356677789999999999999
Q ss_pred EEEecCCeEEEEcChhhHHH
Q 046656 367 IILLSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~~ 386 (1326)
|++|++|+++++|+++++..
T Consensus 242 i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 242 LCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999998864
No 149
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=345.59 Aligned_cols=215 Identities=26% Similarity=0.343 Sum_probs=180.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ +++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 367888887763 12359999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc---cccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQE---TFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~---~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
... ..++.+||++|++. .++..||.||+.|..... ..+.....+.++++++.++|.+..++.+. .|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPPY-----HLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCChh-----hCCH
Confidence 432 23457999999863 445679999998864321 23344445668999999999888777754 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 56688999999985 789999
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 150
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=340.22 Aligned_cols=201 Identities=28% Similarity=0.386 Sum_probs=172.5
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVT 911 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~T 911 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 459999999999999999999999999999999999876 458999999987542 233567899999999998999
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP--LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 989 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPt 989 (1326)
++||+.+...++ ..+.....+.++++++.+++.+ ..++.+ ..||||||||++|||+|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999998865432 2233444566889999999985 566654 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 990 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 990 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999998764 899999999986 57788999999985 788888874
No 151
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-36 Score=336.72 Aligned_cols=210 Identities=28% Similarity=0.421 Sum_probs=174.7
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 4667766542 2469999999999999999999999999999999999876 468999999987643
Q ss_pred cc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHH
Q 046656 891 ET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELV-ELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 891 ~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~vg~~~~~~LSgG 965 (1326)
.. .++.++|++|++.+++.+|++||+.+...... .....+.+.++++.+ ++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHH
Confidence 21 24568999999999999999999988654321 122334567788887 4666666654 359999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999998877899999999986 57788999999985 7888888
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 74
No 152
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.5e-36 Score=343.43 Aligned_cols=215 Identities=20% Similarity=0.311 Sum_probs=181.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478899987663 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046656 889 KQE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGL 962 (1326)
Q Consensus 889 ~~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~L 962 (1326)
... ..++.++|++|+..+++.+|+.||+.+..... ...+....++.+.++++.+++.+..++.++ .|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREH--TQLPAPLLHSTVMMKLEAVGLRGAAKLMPS-----EL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHcCChhhhhCChh-----hC
Confidence 421 13456899999998888899999998754221 112333344567889999999887777653 59
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 963 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 963 SgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
|||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 799
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 153
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=315.03 Aligned_cols=215 Identities=21% Similarity=0.349 Sum_probs=185.0
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc----ceEEEEc
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ----RTAAYIS 204 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 204 (1326)
++.++++++++++|||+.+++||+++++|||||||||...++.|+.+|+ +|+|.++|.+++..... .-+||+|
T Consensus 9 ~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 9 NLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCccccc
Confidence 4456778889999999999999999999999999999999999999998 99999999999876442 3589999
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|++..|..+||+|||.-..+.+.... ...+.+...+.+|+.+.|.+++
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr 133 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLR 133 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHh
Confidence 99999999999999987654431100 0012233467889999999998
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+.. ...||||||||+-|||||+.+|+.++||||++|+||-+..+|-+.++.+.. ++.-|+..-|+..|+...|
T Consensus 134 ~~~-----a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~ 206 (243)
T COG1137 134 DSK-----AYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDIC 206 (243)
T ss_pred cCc-----ccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhh
Confidence 854 447999999999999999999999999999999999999999999999865 3556666789999999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
||.+++.+|++..+|+++++.
T Consensus 207 dRaYIi~~G~vla~G~p~ei~ 227 (243)
T COG1137 207 DRAYIISDGKVLAEGSPEEIV 227 (243)
T ss_pred heEEEEecCeEEecCCHHHHh
Confidence 999999999999999999886
No 154
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-37 Score=320.41 Aligned_cols=213 Identities=28% Similarity=0.401 Sum_probs=178.8
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5667776554 45689999999999999999999999999999999999887 45899999999975
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 046656 890 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVE-LKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ..++-++||||....||.+||+|||..++..+.. ++.....++++.+.+- |.+.+++..| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456789999999999999999999987654422 1111222677887774 6666777765 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||||.++|||||+.+|++|+|||||.||-|.-...|.+.|+++.++ |.||+++-+... ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779999988765 46778999999995 79999
Q ss_pred EcCCC
Q 046656 1044 VGPLG 1048 (1326)
Q Consensus 1044 ~G~~~ 1048 (1326)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99863
No 155
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-37 Score=319.94 Aligned_cols=212 Identities=24% Similarity=0.365 Sum_probs=174.3
Q ss_pred cccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc----ceEEEEcc
Q 046656 130 LTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ----RTAAYISQ 205 (1326)
Q Consensus 130 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q 205 (1326)
+...+++.++|++||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+. +-++||||
T Consensus 9 l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPe 85 (237)
T COG0410 9 LSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPE 85 (237)
T ss_pred EeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcc
Confidence 344567788999999999999999999999999999999999999987 99999999999876553 56899999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcC-Ccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLG-LDVCA 284 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~ 284 (1326)
....|++|||+|||..++...... +. .+ .. .|++.+.+= |..-.
T Consensus 86 gR~iF~~LTVeENL~~g~~~~~~~-~~------~~------~~----------------------~e~v~~lFP~Lker~ 130 (237)
T COG0410 86 GRRIFPRLTVEENLLLGAYARRDK-EA------QE------RD----------------------LEEVYELFPRLKERR 130 (237)
T ss_pred cccchhhCcHHHHHhhhhhccccc-cc------cc------cc----------------------HHHHHHHChhHHHHh
Confidence 999999999999999876543210 00 00 00 111222221 22223
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+.. ...|||||||-++|||||+++|++|+|||||.||-|.-..+|++.++++.+. .+.+|+.+.|+...+.+++
T Consensus 131 ~~~-----aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~ia 204 (237)
T COG0410 131 NQR-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIA 204 (237)
T ss_pred cCc-----ccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhh
Confidence 333 3369999999999999999999999999999999999999999999998754 4578888999999999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
||.++|.+|+|++.|+.+++.
T Consensus 205 Dr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 205 DRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred CEEEEEeCCEEEEecCHHHHh
Confidence 999999999999999999885
No 156
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=347.56 Aligned_cols=218 Identities=26% Similarity=0.304 Sum_probs=179.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|+++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889988774210 012459999999999999999999999999999999999876 45899999998763
Q ss_pred c-------ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046656 890 Q-------ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~-------~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 960 (1326)
. ...++.+|||+|++. .+...||+||+.|+.... ..+.++..++++++++.++|. +..++.+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 134567999999862 233479999999865322 234444456789999999996 5666654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+||+++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999765 899999999986 67788999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 157
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=332.35 Aligned_cols=208 Identities=34% Similarity=0.500 Sum_probs=174.6
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 4667766552 246999999999999 999999999999999999999876 468999999987643
Q ss_pred c--cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 891 E--TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 891 ~--~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
. ..++.++|++|++.+++.+||.||+.+....+ ..+..+..+.++++++.+++.+..++.++ .|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLK---GIPSKEVKARVDEVLELVNLGDRAKKKIG-----SLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHCCCHHHHhCchh-----hCCHHHHH
Confidence 2 23567899999999888899999998865443 12233334568899999999887776653 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||++. .+.+.+|++++|++ |+++..|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999876 599999999986 46678999999986 6877654
No 158
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=347.88 Aligned_cols=218 Identities=23% Similarity=0.300 Sum_probs=180.3
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... .....+|+|||++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67888888774210 011359999999999999999999999999999999999877 45899999986531
Q ss_pred ---------------------------cccccceEEEeecCC-CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Q 046656 890 ---------------------------QETFTRISGYCEQND-IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIM 941 (1326)
Q Consensus 890 ---------------------------~~~~~~~~gyv~Q~~-~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l 941 (1326)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356799999985 3344579999999865432 344555566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Q 046656 942 ELVELK-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQ 1020 (1326)
Q Consensus 942 ~~l~l~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1020 (1326)
+.++|. ++.++.+ ..||||||||++||++|+.+|++|||||||+|||+.++..+++.|+++.+.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 6677665 3699999999999999999999999999999999999999999999998779999999999
Q ss_pred CcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 1021 PSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1021 ~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
++ ++.+.+||+++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 76 57788999999985 799999985
No 159
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.3e-36 Score=333.28 Aligned_cols=208 Identities=24% Similarity=0.317 Sum_probs=174.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 46778877652 12469999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. .+++.++|++|++.+++..|++||+.+....+ ....++..+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888899999998865432 2233444456789999999988777665 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999998777899999999986 56778999999986 564
No 160
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-36 Score=334.34 Aligned_cols=199 Identities=27% Similarity=0.425 Sum_probs=164.8
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCC--CCCCH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHS--PLVTV 912 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~~Tv 912 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. +..||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999876 45899999998653 2456799999997663 34799
Q ss_pred HHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 046656 913 YESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 991 (1326)
Q Consensus 913 ~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsg 991 (1326)
+||+.+....... .....+...+.++++++.+++.+..++.++ .||||||||++|||||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIG-----ELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 001122334568899999999877776653 5999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 992 LDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 992 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998877999999999986 57788999999975 4 55544
No 161
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=348.25 Aligned_cols=218 Identities=24% Similarity=0.335 Sum_probs=180.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999998874210 012359999999999999999999999999999999999887 4589999999775
Q ss_pred Cc-------------------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc
Q 046656 889 KQ-------------------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK 947 (1326)
Q Consensus 889 ~~-------------------~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 947 (1326)
.. ...++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3444 59999998864321 234444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHH
Q 046656 948 -PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIF 1026 (1326)
Q Consensus 948 -~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1026 (1326)
+..++.+ ..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 4555543 469999999999999999999999999999999999999999999998777999999999986 567
Q ss_pred HHhceeeEEecCcEEEEEcCC
Q 046656 1027 EAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1027 ~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999985
No 162
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-37 Score=322.49 Aligned_cols=207 Identities=27% Similarity=0.362 Sum_probs=180.4
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCccc----ccceEEEeecCCCCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQET----FTRISGYCEQNDIHSP 908 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 908 (1326)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++.... .+.-++--+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 46789999999999999999999999999999999999988 46899999999875432 2345677899999999
Q ss_pred CCCHHHHHHHHHHhhc--------cC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 046656 909 LVTVYESLLYSAWLRL--------RT-EVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVAN 979 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~--------~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~ 979 (1326)
.+||.||+..++..+. +. ....++..+++.++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999988754331 11 11234456778999999999999999986 5999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 980 PSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 980 p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-||.+ -++.+||||++|+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 799999999998 58999999999985 7999999874
No 163
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.7e-36 Score=332.02 Aligned_cols=205 Identities=26% Similarity=0.346 Sum_probs=172.8
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4667776653 2469999999999999999999999999999999999876 458999999987632
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 891 -----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 891 -----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
...++.++|++|++.+++.+|++||+.+...... ..+.++..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2245679999999988888999999987642111 2233344556889999999988777765 369999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877899999999986 577789999999864
No 164
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=344.29 Aligned_cols=215 Identities=26% Similarity=0.390 Sum_probs=181.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ +++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 578999988763 12459999999999999999999999999999999999876 4689999999876
Q ss_pred Cc-----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046656 889 KQ-----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGL 962 (1326)
Q Consensus 889 ~~-----~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~L 962 (1326)
.. ..+++.+||++|++. .....|++||+.+..... ..+.++..+.++++++.++|.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPTH-----CL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCcc-----cC
Confidence 31 234567999999864 234579999998864322 23444445678999999999888777653 69
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 963 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 963 SgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
|||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999986 46678999999986 699
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999985
No 165
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-36 Score=337.05 Aligned_cols=214 Identities=27% Similarity=0.379 Sum_probs=180.7
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788877653 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 890 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 890 ~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
.. ..++.++|++|++.+++.+|+.||+.+...++. ..+.++.+..++++++.+++.+..+..+ ..||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 31 134579999999988888999999987543221 2233344567889999999987766655 369999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 67788999999985 7899988
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 166
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=338.78 Aligned_cols=215 Identities=21% Similarity=0.255 Sum_probs=180.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 477888887763 2469999999999999999999999999999999999876 4589999999865
Q ss_pred Cc----------------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 046656 889 KQ----------------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLR-Q 951 (1326)
Q Consensus 889 ~~----------------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~ 951 (1326)
.. ..+++.++|++|++.+++.+|++||+.+..... . ........+++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~-~-~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV-L-GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHh-C-CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 123567899999999998899999998754211 1 123444456788999999997753 5
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhce
Q 046656 952 SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDE 1031 (1326)
Q Consensus 952 ~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1031 (1326)
..+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+
T Consensus 148 ~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KYP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 443 469999999999999999999999999999999999999999999999877999999999986 56678999
Q ss_pred eeEEecCcEEEEEcCC
Q 046656 1032 LFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1032 v~~l~~gg~~~~~G~~ 1047 (1326)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 788998875
No 167
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=310.38 Aligned_cols=208 Identities=30% Similarity=0.444 Sum_probs=176.8
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc---ceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ---RTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 212 (1326)
.+.+|++||++++||||++|+||||||||||||+|+|++.|+ +|++.+||.+.+++.+. +.-|..+|+..+-+.
T Consensus 13 Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 13 GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 356899999999999999999999999999999999999998 99999999999887653 567899999888778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+|-+.++..-.+.+.. | .+...+++.+|...++.+.+. +.
T Consensus 90 Ftv~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~-----R~ 132 (259)
T COG4559 90 FTVQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAG-----RD 132 (259)
T ss_pred eEHHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhc-----cc
Confidence 8999999998754432211 0 112234667788888877665 45
Q ss_pred ccCCChhhhHHHHHHHHhhc------CCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 293 VRGISGGQKKRLTTGEMMVG------PALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~------~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.+.|||||||||.+||.|+. ++++||||||||+||.....++++..|++++. +..|+.+.|+..-+..+||+
T Consensus 133 y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDr 210 (259)
T COG4559 133 YRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADR 210 (259)
T ss_pred hhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhe
Confidence 66899999999999999974 44589999999999999999999999999874 45666789999999999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|.+||++..|++++++
T Consensus 211 ivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 211 IVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeeCCeEeecCCHHHhc
Confidence 9999999999999999885
No 168
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.2e-36 Score=337.13 Aligned_cols=214 Identities=24% Similarity=0.321 Sum_probs=177.3
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcCc
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISGY 886 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 886 (1326)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 46778876653 245999999999999999999999999999999999987632 12899999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 046656 887 PKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVGLP 957 (1326)
Q Consensus 887 ~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~~ 957 (1326)
+... ...++.++|++|+..+++ .|++||+.+....+. ..+..+..+.++++++.+++. +..++.+
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 142 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA--- 142 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc---
Confidence 7642 123567999999988888 999999988654331 122344456688999999997 5555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|++
T Consensus 143 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 143 --LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999876 489999999986 57788999999996
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 688998875
No 169
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=311.14 Aligned_cols=227 Identities=25% Similarity=0.369 Sum_probs=187.5
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
|+.+|++|+. .++.+|++||++++|||++||+|||||||||||++|+|... +.+|++.++|.+.+
T Consensus 2 i~a~nls~~~-------------~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSL-------------AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEe-------------ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 4567888876 34679999999999999999999999999999999999877 45899999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
. ....+..+.+||+..+....||+|-+.++..-... .-...+..+.++++|...++.+++.+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 23456779999999988888999999987532211 1111233445789999999999887765 3699999
Q ss_pred HHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 967 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 967 rqrl~ia~aL~~------~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+++-||.+. ...++|||++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 456999999999999999999999999999999999999999985 6678999999985 79
Q ss_pred EEEEcCCCC-ChhhHHHHHh
Q 046656 1041 EIYVGPLGS-NSSDLISYLQ 1059 (1326)
Q Consensus 1041 ~~~~G~~~~-~~~~~~~~f~ 1059 (1326)
++..|++.+ .+.+.++-.+
T Consensus 219 v~a~g~p~~vlt~Etl~~vy 238 (259)
T COG4559 219 VIASGSPQDVLTDETLERVY 238 (259)
T ss_pred EeecCCHHHhcCHHHHHHHh
Confidence 999998743 3445555444
No 170
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4e-36 Score=334.27 Aligned_cols=217 Identities=25% Similarity=0.295 Sum_probs=172.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677887765310 001369999999999999999999999999999999999876 46899999998764
Q ss_pred c------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046656 890 Q------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~------~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 960 (1326)
. ..+++.++|++|++ .+.+.+||+||+.+....... ..........++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 23456799999998 456789999999876433211 111111122235889999995 4556554 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 59999999999999999999999999999999999999999999998765 899999999986 56668999999985 6
Q ss_pred EEEEEc
Q 046656 1040 QEIYVG 1045 (1326)
Q Consensus 1040 ~~~~~G 1045 (1326)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 877654
No 171
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-36 Score=332.19 Aligned_cols=193 Identities=27% Similarity=0.382 Sum_probs=163.8
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCC-CCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDI-HSPLV 910 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~~ 910 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. .++..
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999876 468999999987642 234567899999974 35678
Q ss_pred CHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 046656 911 TVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 990 (1326)
Q Consensus 911 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPts 990 (1326)
|++||+.+..... .......++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764322 1223333456889999999987777665 3599999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 991 GLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 991 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
|||+.++..+.+.|++++++|+|||++||++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 566779999999864
No 172
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=344.71 Aligned_cols=217 Identities=25% Similarity=0.349 Sum_probs=179.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... ...+.+|+|||++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 57888888774110 011359999999999999999999999999999999999877 46899999998863
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046656 890 Q-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGE 959 (1326)
Q Consensus 890 ~-------~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 959 (1326)
. ..+++.+||++|++ .+++ .||.|++.|+.... ..+..+.++++.++++.++|. ++.++.+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 12456799999986 3444 69999999875322 234455566789999999996 4556554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 469999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999985
No 173
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=338.09 Aligned_cols=206 Identities=22% Similarity=0.275 Sum_probs=176.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 588999988763 2459999999999999999999999999999999999876 4589999999765
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235678999999988888999999987421 0 12345788999999988777665 369999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999864 4899999999986 56778999999985 788888764
No 174
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=343.79 Aligned_cols=216 Identities=25% Similarity=0.311 Sum_probs=182.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37888998877411 12359999999999999999999999999999999999877 4689999999886
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.+||++|++. .++..||+||+.|+.... ..+.++.+++++++++.++|.+..+..++ .|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREPA-----RLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCH
Confidence 43 234567999999973 567789999999864322 23455555678999999999988777653 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 44 57999999985 79999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9885
No 175
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=331.48 Aligned_cols=203 Identities=28% Similarity=0.425 Sum_probs=168.8
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 212 (1326)
++.+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 10 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~ 86 (213)
T cd03259 10 YGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPH 86 (213)
T ss_pred eCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccC
Confidence 33457999999999999999999999999999999999999987 9999999988754322 3579999999888889
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.++....+.. . .+....++.+++.+||++..+..
T Consensus 87 ~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 127 (213)
T cd03259 87 LTVAENIAFGLKLRGVP----------K------------------------AEIRARVRELLELVGLEGLLNRY----- 127 (213)
T ss_pred CcHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhcC-----
Confidence 99999998864322110 0 00112345678899998766644
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.++||+|++|++
T Consensus 128 ~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~ 206 (213)
T cd03259 128 PHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNE 206 (213)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998653 355677789999899999999999999
Q ss_pred CeEEEEc
Q 046656 373 GQIVYQG 379 (1326)
Q Consensus 373 G~iv~~G 379 (1326)
|++++.|
T Consensus 207 G~i~~~g 213 (213)
T cd03259 207 GRIVQVG 213 (213)
T ss_pred CEEEecC
Confidence 9998765
No 176
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.4e-36 Score=333.55 Aligned_cols=212 Identities=27% Similarity=0.397 Sum_probs=177.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45677776652 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cc--cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 890 QE--TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 890 ~~--~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
.. ...+.++|++|++.+++..|++||+.+....+ ........+.++++++.+++.+..++.++ .||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKVR-----ELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHH
Confidence 21 22356899999988888899999998765432 22333345568899999999887776654 5999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999874 5899999999986 34 45999999985 78888887
Q ss_pred C
Q 046656 1047 L 1047 (1326)
Q Consensus 1047 ~ 1047 (1326)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 177
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.2e-36 Score=346.12 Aligned_cols=229 Identities=21% Similarity=0.232 Sum_probs=184.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++............+...+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 57889998777532100000001123579999999999999999999999999999999999886 4589999999886
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046656 889 KQE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGE 959 (1326)
Q Consensus 889 ~~~------~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 959 (1326)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..++..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p----- 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRYP----- 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCCc-----
Confidence 431 2356799999997 57889999999988643321 1234555667789999999995 3555554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
..||||||||++|||||+.+|++||+||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999764 999999999986 56678999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 178
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=344.28 Aligned_cols=218 Identities=22% Similarity=0.328 Sum_probs=180.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367888888774210 012459999999999999999999999999999999999877 4589999999876
Q ss_pred Cc-------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 046656 889 KQ-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPG 958 (1326)
Q Consensus 889 ~~-------~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~ 958 (1326)
.. ...++.+|||+|++ .+++ .||.||+.|..... ..+..+..++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 143 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSP---- 143 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 32 13456799999986 3444 59999999864322 234455566789999999996 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 144 -~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 144 -FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred -ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999875 4899999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 799999975
No 179
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-36 Score=332.41 Aligned_cols=209 Identities=30% Similarity=0.378 Sum_probs=174.0
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVHI 210 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~ 210 (1326)
+++.+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 9 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~ 85 (220)
T cd03265 9 KYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVD 85 (220)
T ss_pred EECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCcccc
Confidence 334457999999999999999999999999999999999999887 999999998764321 235799999999889
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.+.....+... .+....++++++.+||++..++.
T Consensus 86 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 128 (220)
T cd03265 86 DELTGWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRL--- 128 (220)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCC---
Confidence 99999999998654322100 00112356789999998766654
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+++|++++|
T Consensus 129 --~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l 205 (220)
T cd03265 129 --VKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAII 205 (220)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4579999999999999999999999999999999999999999999998653 2556777899999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 046656 371 SDGQIVYQGPCELV 384 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~ 384 (1326)
++|+++..|+++++
T Consensus 206 ~~G~i~~~~~~~~~ 219 (220)
T cd03265 206 DHGRIIAEGTPEEL 219 (220)
T ss_pred eCCEEEEeCChHHc
Confidence 99999999987653
No 180
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.3e-36 Score=330.98 Aligned_cols=211 Identities=25% Similarity=0.334 Sum_probs=172.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4677887766311 012469999999999999999999999999999999999876 46899999998764
Q ss_pred cc---c---cc-ceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 046656 890 QE---T---FT-RISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGL 962 (1326)
Q Consensus 890 ~~---~---~~-~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~L 962 (1326)
.. . ++ +.++|++|++.+++.+|++||+.+....+ .....+..+.+.++++.+++.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIG---KKSVKEAKERAYEMLEKVGLEHRINHRPS-----EL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hC
Confidence 21 1 12 56899999998888899999998865432 12233334567899999999887776653 59
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 963 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 963 SgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
|||||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998754 899999999986 34 55799999986 565
Q ss_pred E
Q 046656 1042 I 1042 (1326)
Q Consensus 1042 ~ 1042 (1326)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 181
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=343.73 Aligned_cols=219 Identities=25% Similarity=0.303 Sum_probs=179.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367788887763110 001459999999999999999999999999999999999877 4689999999876
Q ss_pred Cc-------ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046656 889 KQ-------ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGE 959 (1326)
Q Consensus 889 ~~-------~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 959 (1326)
.. ...++.+||++|++. .+..+||.||+.|..... ....++..++++++++.++|. +..++.++
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~---- 144 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSPF---- 144 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCcc----
Confidence 32 123457899999863 233579999998764322 233445556789999999997 56677654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++ |
T Consensus 145 -~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 145 -ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999777999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 99999875
No 182
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.9e-36 Score=330.49 Aligned_cols=197 Identities=25% Similarity=0.350 Sum_probs=171.1
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYE 914 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E 914 (1326)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999876 46899999998764322 256899999998888899999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 915 SLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 915 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
|+.+....+. .+ +..+.++++.+++.+..+..++ .||||||||++|||+|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKAK-----QFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhHh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654321 11 2347889999999887777653 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 995 RAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
.++..+++.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|+..
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999777999999999986 57788999999985 7999999864
No 183
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=351.52 Aligned_cols=207 Identities=25% Similarity=0.356 Sum_probs=176.3
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHDVH 209 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 209 (1326)
.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l 93 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNL 93 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCcc
Confidence 357999999999999999999999999999999999999987 9999999998765322 3579999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++....+... .+....++.+++.+||++..++
T Consensus 94 ~~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~--- 136 (343)
T PRK11153 94 LSSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADR--- 136 (343)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhC---
Confidence 999999999998754432100 0011235677899999876664
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++
T Consensus 137 --~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~ 213 (343)
T PRK11153 137 --YPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAV 213 (343)
T ss_pred --ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEE
Confidence 45579999999999999999999999999999999999999999999998653 356677789999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 214 IDAGRLVEQGTVSEVF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999998774
No 184
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.4e-36 Score=347.01 Aligned_cols=209 Identities=27% Similarity=0.371 Sum_probs=175.5
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVHIG 211 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~ 211 (1326)
++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (303)
T TIGR01288 14 YGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDP 90 (303)
T ss_pred eCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCc
Confidence 34456999999999999999999999999999999999999987 999999998864321 2467999999998889
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
.+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 91 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~--- 133 (303)
T TIGR01288 91 EFTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRV--- 133 (303)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCch---
Confidence 9999999987543321100 001122456788999988777554
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++. .+++|+.++|+.+++.++||+|++|+
T Consensus 134 --~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~ 209 (303)
T TIGR01288 134 --ALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLE 209 (303)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 35667778999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 046656 372 DGQIVYQGPCELVLD 386 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~~ 386 (1326)
+|++++.|+++++..
T Consensus 210 ~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 210 SGRKIAEGRPHALID 224 (303)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999988753
No 185
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=341.10 Aligned_cols=213 Identities=23% Similarity=0.320 Sum_probs=178.7
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ +++.+|+||||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 45777776652 12359999999999999999999999999999999999876 46899999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 890 Q----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ~----~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
. ...++.+||++|++. .+...|+.||+.|..... ..+....++.++++++.++|.+..++.++ .||+
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSPK-----TLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCcc-----cCCH
Confidence 2 223567999999975 356689999998865322 23444445678899999999888777653 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999998877999999999986 45 66999999986 789999
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 186
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-35 Score=347.40 Aligned_cols=214 Identities=25% Similarity=0.431 Sum_probs=180.9
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY 886 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 886 (1326)
+..+..+|+++.++ +++++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCc
Confidence 45666779998875 23479999999999999999999999999999999999987 46899999998
Q ss_pred cCC---cccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccc------cccCC
Q 046656 887 PKK---QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQS------LVGLP 957 (1326)
Q Consensus 887 ~~~---~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~------~vg~~ 957 (1326)
+.. ...++++++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+. .+|.
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige- 452 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE- 452 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc-
Confidence 764 4568899999999998876 49999998752 1222 3447888888888776544 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
++++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++|+|++||++. ....+|+|++|++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld~ 529 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLDN 529 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEecC
Confidence 4568999999999999999999999999999999999999999999999986 599999999974 5677899999985
Q ss_pred CcEEEEEcCCCC
Q 046656 1038 GGQEIYVGPLGS 1049 (1326)
Q Consensus 1038 gg~~~~~G~~~~ 1049 (1326)
|+++..|...+
T Consensus 530 -G~l~~~g~~~~ 540 (559)
T COG4988 530 -GRLVEQGTHEE 540 (559)
T ss_pred -CceeccCCHHH
Confidence 79999998643
No 187
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=334.75 Aligned_cols=212 Identities=23% Similarity=0.340 Sum_probs=177.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 477888887663 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 046656 889 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELV-ELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 889 ~~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~vg~~~~~~LS 963 (1326)
... ..++.++|++|+..+++..||.||+.+..... ......+.++++++.+ ++.+..+..+ ..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 432 13457999999998888899999998754211 1122234567778887 4766555543 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999986 67889999999986 79999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9985
No 188
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-36 Score=362.27 Aligned_cols=211 Identities=24% Similarity=0.447 Sum_probs=174.1
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHI 210 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 210 (1326)
+++.+||+|+|++|+|||.+||+|||||||||+.+.|..+++|+ +|+|.+||+|+.+.++ ++.+|+|.|+|.+|
T Consensus 478 Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLF 554 (716)
T KOG0058|consen 478 RPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLF 554 (716)
T ss_pred CCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceee
Confidence 34567999999999999999999999999999999999999998 9999999999988776 47899999999987
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
. -||+|||.|+... . . .+..+.++... . ..|. +.++++..||.||+
T Consensus 555 s-~sI~eNI~YG~~~--~-t----------------------~e~i~~AAk~A-N----ah~F---I~~~p~gY~T~VGE 600 (716)
T KOG0058|consen 555 S-GSIRENIAYGLDN--A-T----------------------DEEIEAAAKMA-N----AHEF---ITNFPDGYNTVVGE 600 (716)
T ss_pred c-ccHHHHHhcCCCC--C-C----------------------HHHHHHHHHHh-C----hHHH---HHhCccccccccCC
Confidence 5 5999999998641 1 0 01111111110 0 0122 33589999999996
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+. ..||||||||++|||||+.+|+||||||.||+||+.+...+-+.|.+..+ +.|+++|.|.. .+.+.+|+|+++
T Consensus 601 kG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRL-STV~~Ad~Ivvi 675 (716)
T KOG0058|consen 601 KG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRL-STVRHADQIVVI 675 (716)
T ss_pred cc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhh-hHhhhccEEEEE
Confidence 54 47999999999999999999999999999999999999999999988643 35555577766 577889999999
Q ss_pred cCCeEEEEcChhhHHH
Q 046656 371 SDGQIVYQGPCELVLD 386 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~~ 386 (1326)
++|++++.|+++|+++
T Consensus 676 ~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 676 DKGRVVEMGTHDELLS 691 (716)
T ss_pred cCCeEEecccHHHHhh
Confidence 9999999999999864
No 189
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=339.33 Aligned_cols=214 Identities=24% Similarity=0.323 Sum_probs=178.8
Q ss_pred hcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEE
Q 046656 129 ILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAA 201 (1326)
Q Consensus 129 ~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~ 201 (1326)
++.++++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.+... ++.++
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEE
Confidence 4455667788999999999999999999999999999999999999987 9999999988754321 24699
Q ss_pred EEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc
Q 046656 202 YISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD 281 (1326)
Q Consensus 202 yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 281 (1326)
|++|++.+++.+||+||+.++....+... .+....++++++.+||+
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~ 151 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLE 151 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCH
Confidence 99999988989999999998654321100 00112346678999998
Q ss_pred ccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHH
Q 046656 282 VCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETY 361 (1326)
Q Consensus 282 ~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 361 (1326)
+..++. ++.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.++++++. .+.+|+.++|+.+++.
T Consensus 152 ~~~~~~-----~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~ 225 (269)
T cd03294 152 GWEHKY-----PDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEAL 225 (269)
T ss_pred hHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH
Confidence 766654 4579999999999999999999999999999999999999999999998653 3556777889998999
Q ss_pred hhCCeEEEecCCeEEEEcChhhHH
Q 046656 362 DLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 362 ~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
+++|++++|++|++++.|+++++.
T Consensus 226 ~~~d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 226 RLGDRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999988764
No 190
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-36 Score=337.56 Aligned_cols=217 Identities=23% Similarity=0.266 Sum_probs=179.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 477888887652 3469999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-------C-----CCCHHHHHHHHHHHHHHcCCcccccc
Q 046656 889 KQE---T-FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-------T-----EVDSETRKMFIEEIMELVELKPLRQS 952 (1326)
Q Consensus 889 ~~~---~-~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-------~-----~~~~~~~~~~v~~~l~~l~l~~~~~~ 952 (1326)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+++.+..++
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 432 1 233489999999999999999999985431100 0 00111233567889999999877777
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhce
Q 046656 953 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDE 1031 (1326)
Q Consensus 953 ~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~ 1031 (1326)
.++ .||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|+
T Consensus 150 ~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QAG-----NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 654 59999999999999999999999999999999999999999999998765 899999999986 67788999
Q ss_pred eeEEecCcEEEEEcCC
Q 046656 1032 LFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1032 v~~l~~gg~~~~~G~~ 1047 (1326)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 789999885
No 191
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-36 Score=351.77 Aligned_cols=203 Identities=24% Similarity=0.296 Sum_probs=175.6
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc---c----ccceEEEeecCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE---T----FTRISGYCEQNDI 905 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 905 (1326)
+...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.+||++|+..
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 33568999999999999999999999999999999999887 4589999999886431 1 1357999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 046656 906 HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 985 (1326)
Q Consensus 906 ~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illL 985 (1326)
+++.+||+||+.|....+ ..+.++..++++++++.++|.+..++.+. .||||||||++|||||+.+|++|||
T Consensus 117 l~~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~~~~~~-----~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYAHSYPD-----ELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhhhcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876443 22344455678899999999988877753 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 986 DEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 986 DEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999875 4899999999986 67788999999985 799998875
No 192
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-36 Score=334.29 Aligned_cols=213 Identities=24% Similarity=0.330 Sum_probs=179.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67788877663 2469999999999999999999999999999999999876 46899999998752
Q ss_pred ------c---ccccceEEEeecCCCCCCCCCHHHHHHHHH-HhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046656 890 ------Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSA-WLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGE 959 (1326)
Q Consensus 890 ------~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~-~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 959 (1326)
. ...++.++|++|++.+++.+|+.||+.+.. ... .....+..+.+.++++.+++.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 0 123457899999999999999999997532 211 1223334456889999999988777765
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 369999999999999999999999999999999999999999999998777999999999986 56678999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99998875
No 193
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-36 Score=325.58 Aligned_cols=224 Identities=25% Similarity=0.355 Sum_probs=195.4
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQH 206 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 206 (1326)
.+...-++|+|+.++.||+..|||-||||||||+++|.++.+|+ .|+|.++|.++..... ++.++.|+|+
T Consensus 38 tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~ 114 (386)
T COG4175 38 TGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQS 114 (386)
T ss_pred hCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhh
Confidence 34456799999999999999999999999999999999999998 9999999999866543 3679999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
..++|+.||.||+.|+.+.+|+... +.+.+..+.|+.+||+..++
T Consensus 115 FaLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~- 159 (386)
T COG4175 115 FALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYAD- 159 (386)
T ss_pred hccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhh-
Confidence 9999999999999999999886421 12334577899999998887
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.++..||||+||||.+||||+.+|+||+||||+|+|||--+.++.+.|.++-...+ .||+.++|+.+|++++.||
T Consensus 160 ----~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 160 ----KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDR 234 (386)
T ss_pred ----cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccce
Confidence 46678999999999999999999999999999999999999999999988866554 5566799999999999999
Q ss_pred EEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHh
Q 046656 367 IILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEV 408 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~ 408 (1326)
|.+|.+|+|+..|+++|++ ..|...-+++|.+++
T Consensus 235 IaimkdG~ivQ~Gtp~eIl--------~~PAndYV~~Fv~~v 268 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEIL--------LNPANDYVRDFVRNV 268 (386)
T ss_pred EEEecCCeEEEeCCHHHHH--------cCccHHHHHHHHhcC
Confidence 9999999999999999996 356666667776654
No 194
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-35 Score=335.71 Aligned_cols=213 Identities=23% Similarity=0.307 Sum_probs=179.3
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677777653 2469999999999999999999999999999999999876 458999999987532
Q ss_pred ----------------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 046656 891 ----------------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLV 954 (1326)
Q Consensus 891 ----------------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v 954 (1326)
...++.++|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 144 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMP 144 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcCh
Confidence 123567999999998898999999998753211 12233444566889999999988777654
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceee
Q 046656 955 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELF 1033 (1326)
Q Consensus 955 g~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1033 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||++. ++...+|+++
T Consensus 145 -----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T TIGR03005 145 -----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVC 218 (252)
T ss_pred -----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 469999999999999999999999999999999999999999999998764 899999999986 5777899999
Q ss_pred EEecCcEEEEEcCC
Q 046656 1034 LMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1034 ~l~~gg~~~~~G~~ 1047 (1326)
+|++ |++++.|+.
T Consensus 219 ~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 219 FFDK-GRIVEQGKP 231 (252)
T ss_pred EEEC-CEEEEeCCH
Confidence 9986 789988874
No 195
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-36 Score=341.59 Aligned_cols=218 Identities=26% Similarity=0.390 Sum_probs=178.1
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-----ccceEEEEccCCC-CC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-----PQRTAAYISQHDV-HI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 210 (1326)
+++|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999876432 2467999999853 44
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc--ccccccc
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD--VCADTLV 288 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 288 (1326)
...||+||+.|+....+.. + .+....++++++.+||+ +..|
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~--- 139 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------E------------------------EEIENRVKRAMNIVGLDYEDYKD--- 139 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhcc---
Confidence 5689999999865432210 0 11122456789999996 4444
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
..++.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|++++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 140 --KSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred --CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 456689999999999999999999999999999999999999999999998653 35677778999999999999999
Q ss_pred EecCCeEEEEcChhhHHH---HHHhcCCCCCC
Q 046656 369 LLSDGQIVYQGPCELVLD---FFESMGFKCPE 397 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~~---~F~~lG~~~p~ 397 (1326)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23345655544
No 196
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-35 Score=333.37 Aligned_cols=218 Identities=23% Similarity=0.255 Sum_probs=175.6
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5677776653 346999999999999999999999999999999999984211468999999987643
Q ss_pred c---cc-cceEEEeecCCCCCCCCCHHHHHHHHHHhhccC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCC
Q 046656 891 E---TF-TRISGYCEQNDIHSPLVTVYESLLYSAWLRLRT----EVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESG 961 (1326)
Q Consensus 891 ~---~~-~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~ 961 (1326)
. .. +..++|++|++.+++.+|++|++.+........ ..+..+..+.++++++.++|. ++.+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 11 234899999999999999999998764322110 112233345688999999997 45555442 24
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHH-hceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEA-FDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gg~ 1040 (1326)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877899999999986 46666 799999985 78
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 8998874
No 197
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=339.83 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=180.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ +.+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67788887763 12359999999999999999999999999999999999876 46899999998764
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 890 Q---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
. ...++.+||++|++. .+...||.||+.+..... ..+.+...+.++++++.++|.+..++.++ .||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVPH-----HLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCCHH
Confidence 3 234567899999964 334579999998765322 23444445678999999999887777653 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999998765 899999999986 57789999999986 689999
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 975
No 198
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-34 Score=364.68 Aligned_cols=215 Identities=30% Similarity=0.416 Sum_probs=179.4
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY 886 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 886 (1326)
...++|+||+++|+..+ +..+|+|+|+.|++|+.+||+|+|||||||++++|.+... |.+|+|+|||.
T Consensus 348 ~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG~ 415 (1228)
T KOG0055|consen 348 KGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDGE 415 (1228)
T ss_pred ccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcCc
Confidence 44799999999997543 3569999999999999999999999999999999999887 56999999999
Q ss_pred cCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcC-------CcccccccccC
Q 046656 887 PKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVE-------LKPLRQSLVGL 956 (1326)
Q Consensus 887 ~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-------l~~~~~~~vg~ 956 (1326)
++.. ..++..+|.|.|+|.++ ..|++||+.|+- .+.+. +.++++.++.+ |.+-.|+.+|.
T Consensus 416 di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~----~~i~~a~k~ana~~fi~~lp~g~~T~vge 485 (1228)
T KOG0055|consen 416 DIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATR----EEIEEAAKAANAHDFILKLPDGYDTLVGE 485 (1228)
T ss_pred cchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccH----HHHHHHHHHccHHHHHHhhHHhhcccccC
Confidence 8754 45678899999999766 479999999852 22222 22445554443 33446777887
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
.|. .||||||||++|||||+++|+|||||||||+||+++.+.|+++|++.. .|+|.|+++|++| ..+.+|++++|+
T Consensus 486 ~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I~v~~ 561 (1228)
T KOG0055|consen 486 RGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKIAVME 561 (1228)
T ss_pred CCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEEEEEE
Confidence 665 499999999999999999999999999999999999999999998865 5999999999987 345699999999
Q ss_pred cCcEEEEEcCCC
Q 046656 1037 RGGQEIYVGPLG 1048 (1326)
Q Consensus 1037 ~gg~~~~~G~~~ 1048 (1326)
+ |+++..|..+
T Consensus 562 ~-G~IvE~G~h~ 572 (1228)
T KOG0055|consen 562 E-GKIVEQGTHD 572 (1228)
T ss_pred C-CEEEEecCHH
Confidence 6 7999999863
No 199
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=335.43 Aligned_cols=214 Identities=24% Similarity=0.298 Sum_probs=176.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578899887653 246999999999999999999999999999999999987531 3589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~ 956 (1326)
.++.. ..+++.+||++|+..+++ .|++||+.|....+ ..+.+..++.++++++.+++. +..++.+
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 152 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPA-- 152 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh--
Confidence 87532 124567999999988777 89999999865332 223333445688899999884 2334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ |+|||++||++. ++.+.+|++++|+
T Consensus 153 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 153 ---LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 899999999986 5678899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 200
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=334.11 Aligned_cols=211 Identities=27% Similarity=0.380 Sum_probs=173.4
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 213 (1326)
+.+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 13 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~ 89 (239)
T cd03296 13 GDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHM 89 (239)
T ss_pred CCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCC
Confidence 3456999999999999999999999999999999999999887 9999999988754332 35799999998888899
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||+||+.++....+...+.+ . .+....++.+++.+||++..+. .+
T Consensus 90 tv~e~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~ 134 (239)
T cd03296 90 TVFDNVAFGLRVKPRSERPP------E------------------------AEIRAKVHELLKLVQLDWLADR-----YP 134 (239)
T ss_pred CHHHHHhhhhhhccccccCC------H------------------------HHHHHHHHHHHHHcCChhhhhc-----Ch
Confidence 99999998654321100000 0 0011234667889999766554 34
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+++|+|++|++|
T Consensus 135 ~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G 213 (239)
T cd03296 135 AQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKG 213 (239)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999998653 2456666888888899999999999999
Q ss_pred eEEEEcChhhH
Q 046656 374 QIVYQGPCELV 384 (1326)
Q Consensus 374 ~iv~~G~~~~~ 384 (1326)
++++.|+++++
T Consensus 214 ~i~~~~~~~~~ 224 (239)
T cd03296 214 RIEQVGTPDEV 224 (239)
T ss_pred eEEEecCHHHH
Confidence 99999998776
No 201
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-36 Score=336.52 Aligned_cols=213 Identities=25% Similarity=0.352 Sum_probs=178.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788877653 2469999999999999999999999999999999999876 46899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+++.+..++.++ .|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDYP-----QLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHH
Confidence 2 223457899999988878899999998754221 11222334568899999999887777654 599999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 967 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 967 rqrl~ia~aL~------~~p~illLDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|+|||++||++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 66899999999986 57778999999985 6
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 202
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8e-36 Score=333.56 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=174.9
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l 86 (236)
T cd03219 10 FGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRL 86 (236)
T ss_pred ECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEeccccc
Confidence 33456999999999999999999999999999999999999887 9999999988765432 2459999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++....+... . .+. . ..+ ...+....++++++.+||++..++
T Consensus 87 ~~~~tv~~~l~~~~~~~~~~~-~------~~~---~-~~~-------------~~~~~~~~~~~~l~~~~l~~~~~~--- 139 (236)
T cd03219 87 FPELTVLENVMVAAQARTGSG-L------LLA---R-ARR-------------EEREARERAEELLERVGLADLADR--- 139 (236)
T ss_pred ccCCCHHHHHHHHHhhccccc-c------ccc---c-ccc-------------cHHHHHHHHHHHHHHcCccchhhC---
Confidence 999999999998654321100 0 000 0 000 000112345678899999876554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. . +.+|+.++|+..++.++||+|++
T Consensus 140 --~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~ 215 (236)
T cd03219 140 --PAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTV 215 (236)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEE
Confidence 4557999999999999999999999999999999999999999999999865 3 45667788999999999999999
Q ss_pred ecCCeEEEEcChhhH
Q 046656 370 LSDGQIVYQGPCELV 384 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~ 384 (1326)
|++|++++.|+++++
T Consensus 216 l~~G~i~~~~~~~~~ 230 (236)
T cd03219 216 LDQGRVIAEGTPDEV 230 (236)
T ss_pred EeCCEEEeecCHHHh
Confidence 999999999998876
No 203
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-36 Score=301.73 Aligned_cols=200 Identities=27% Similarity=0.398 Sum_probs=177.4
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYE 914 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E 914 (1326)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||.++....- ..|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 359999999999999999999999999999999999987 568999999998865432 2489999999999999999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 915 SLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 915 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
|+.|+..++ .+++.++.+.+.+.+..+||.+..++.+- .||||||||+.|||||..+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~-----qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYIW-----QLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccceE-----eecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998877 56788999999999999999998887763 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHHhceeeEEecC-cEEEEEcCC
Q 046656 995 RAAAIVMRTVKNTV-ETGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPL 1047 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g-g~~~~~G~~ 1047 (1326)
-+++.++++|-++. .+|+.++++||+.. +..-+++++++|+.| |+++..-++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 99999999999986 45999999999976 444467999999853 677776665
No 204
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-35 Score=332.95 Aligned_cols=215 Identities=26% Similarity=0.317 Sum_probs=178.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56778876652 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046656 890 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-----TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 960 (1326)
.. ..++.++|++|++.+++.+||+||+.+....... .....+..++.++++++.+++.+..+..++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAG----- 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChh-----
Confidence 31 1234699999999999999999999885431100 001122334568999999999887776654
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 5999999999999999999999999999999999999999999999875 799999999986 57778999999986 78
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888875
No 205
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.7e-36 Score=332.37 Aligned_cols=209 Identities=21% Similarity=0.354 Sum_probs=174.1
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHD 207 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d 207 (1326)
.+++.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~ 84 (232)
T cd03218 8 KRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEA 84 (232)
T ss_pred EEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCc
Confidence 3344557999999999999999999999999999999999999987 9999999988754322 24699999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++.+||+||+.+.....+.. . .+....++.+++.+||++..++
T Consensus 85 ~~~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~- 129 (232)
T cd03218 85 SIFRKLTVEENILAVLEIRGLS----------K------------------------KEREEKLEELLEEFHITHLRKS- 129 (232)
T ss_pred cccccCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhC-
Confidence 8999999999998864322110 0 0011235677889999876654
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
.++.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+++++.++|+.+++.+++|+|
T Consensus 130 ----~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i 203 (232)
T cd03218 130 ----KASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRA 203 (232)
T ss_pred ----ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4457999999999999999999999999999999999999999999998864 3556777889988999999999
Q ss_pred EEecCCeEEEEcChhhH
Q 046656 368 ILLSDGQIVYQGPCELV 384 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~ 384 (1326)
++|++|++++.|+.+++
T Consensus 204 ~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 204 YIIYEGKVLAEGTPEEI 220 (232)
T ss_pred EEEECCeEEEEeCHHHh
Confidence 99999999999998765
No 206
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.74 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=178.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 367888877653 246999999999999999999999999999999999987531 3689999999
Q ss_pred ccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 046656 886 YPKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGLPG 958 (1326)
Q Consensus 886 ~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~~~ 958 (1326)
.++.. ..+++.+||++|++.+++.+||.||+.+....+.. .....+..+.++++++.++|.+ ..++.+
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---- 144 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAPA---- 144 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc----
Confidence 87642 23456799999999888899999999886533211 1122334456889999999864 234433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++
T Consensus 145 -~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 145 -GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 46999999999999999999999999999999999999999999999864 899999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 788998875
No 207
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=334.61 Aligned_cols=217 Identities=24% Similarity=0.265 Sum_probs=178.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999987642 3589999999
Q ss_pred ccCC--c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKK--Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~--~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++. . ..+++.++|++|++.+++.+|+.||+.+....+.. ..+.+...+.++++++.+++.+ ..+..+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 147 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDYP-- 147 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccCh--
Confidence 8764 1 23456799999999999899999999886543211 1123334456788999999853 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|++++|+
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 148 ---SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 208
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.4e-36 Score=344.53 Aligned_cols=210 Identities=24% Similarity=0.339 Sum_probs=178.5
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVH 209 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 209 (1326)
++++++.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.+||++|++.+
T Consensus 10 ~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l 86 (301)
T TIGR03522 10 KLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPL 86 (301)
T ss_pred EEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCC
Confidence 3344567999999999999999999999999999999999999988 999999998875422 23579999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.|.++..+... .+....++.+++.+||++..+..+
T Consensus 87 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 131 (301)
T TIGR03522 87 YLDMYVREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKI- 131 (301)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCch-
Confidence 999999999998765433110 001123567899999998777554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+.|||||||||+||+||+++|++++|||||+|||+.++..+++.++++.. +++|+.++|..+++.++||+|++
T Consensus 132 ----~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiii~sH~l~~~~~~~d~i~~ 204 (301)
T TIGR03522 132 ----GQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK---DKTIILSTHIMQEVEAICDRVII 204 (301)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEcCCHHHHHHhCCEEEE
Confidence 46999999999999999999999999999999999999999999998742 36677789999999999999999
Q ss_pred ecCCeEEEEcChhhHHH
Q 046656 370 LSDGQIVYQGPCELVLD 386 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~~ 386 (1326)
|++|++++.|+.+++..
T Consensus 205 l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 205 INKGKIVADKKLDELSA 221 (301)
T ss_pred EECCEEEEeCCHHHHHH
Confidence 99999999999998754
No 209
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=339.83 Aligned_cols=215 Identities=26% Similarity=0.314 Sum_probs=181.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++. ..+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3778888877631 12459999999999999999999999999999999999877 4589999999876
Q ss_pred Ccc---cccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQE---TFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~---~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
... ..++.+||++|++. .++..||.||+.+..... ..+.++.++.++++++.++|.+..++.++ .|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPH-----RLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCH
Confidence 432 23567999999973 566789999998865332 23344445678999999999988877764 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++ +.+|++++|++ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999986 34 45999999985 78999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 210
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=334.18 Aligned_cols=215 Identities=22% Similarity=0.246 Sum_probs=176.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578999987763 235999999999999999999999999999999999987632 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .||+||+.+...... .......++.++++++.+++. +..++.+
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 148 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTNA-- 148 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCCc--
Confidence 87531 134567999999987774 899999988653321 112233345688889998873 3334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 149 ---~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 149 ---LSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999986 4799999999986 5678899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799998874
No 211
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=338.58 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=177.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 45778877653 2459999999999999999999999999999999999876 46899999998763
Q ss_pred c-----ccccceEEEeecCCCC-CCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 Q-----ETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~-----~~~~~~~gyv~Q~~~~-~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
. ...++.+||++|++.. ....|+.||+.+..... .....+..+.++++++.+++.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234679999998753 34568999998764322 2233444456889999999988777665 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998877999999999986 56778999999986 78999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 212
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.1e-36 Score=332.43 Aligned_cols=207 Identities=24% Similarity=0.335 Sum_probs=170.5
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhccc-----CCCCceeeEEEECCccCCCCC-----ccceEEEE
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQL-----DSSLKVSGRVTYNGHDMNEFV-----PQRTAAYI 203 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv 203 (1326)
++.+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|.++.... .++.++|+
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~ 86 (227)
T cd03260 10 YGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMV 86 (227)
T ss_pred cCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEE
Confidence 34457999999999999999999999999999999999999 776 999999998875432 23579999
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 204 SQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 204 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
+|++.++ .+||+||+.++.+..+... . .+....++++++.+||++.
T Consensus 87 ~q~~~~~-~~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~ 132 (227)
T cd03260 87 FQKPNPF-PGSIYDNVAYGLRLHGIKL---------K------------------------EELDERVEEALRKAALWDE 132 (227)
T ss_pred ecCchhc-cccHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCChH
Confidence 9998877 8999999998654321100 0 0011234667889999866
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
.+..+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.++
T Consensus 133 ~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~ 206 (227)
T cd03260 133 VKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARV 206 (227)
T ss_pred HhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHh
Confidence 554320 467999999999999999999999999999999999999999999999854 3 6677788999999999
Q ss_pred CCeEEEecCCeEEEEcChhh
Q 046656 364 FDDIILLSDGQIVYQGPCEL 383 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~~~ 383 (1326)
||+|++|++|++++.|++++
T Consensus 207 ~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 207 ADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred CCEEEEEeCCEEEEecCccc
Confidence 99999999999999998764
No 213
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-35 Score=327.39 Aligned_cols=202 Identities=29% Similarity=0.435 Sum_probs=169.1
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 213 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (213)
T cd03301 11 GNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHM 87 (213)
T ss_pred CCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCC
Confidence 3456999999999999999999999999999999999999887 9999999988754322 35799999998888899
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||+||+.++.+..+... .+....++.+++.+||++..+.. +
T Consensus 88 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 128 (213)
T cd03301 88 TVYDNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRK-----P 128 (213)
T ss_pred CHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCC-----h
Confidence 99999988654321100 00112356678999998766644 4
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++... +.+|++++|+.+++.+++|+|++|++|
T Consensus 129 ~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g 207 (213)
T cd03301 129 KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDG 207 (213)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECC
Confidence 5799999999999999999999999999999999999999999999986533 456666889888999999999999999
Q ss_pred eEEEEc
Q 046656 374 QIVYQG 379 (1326)
Q Consensus 374 ~iv~~G 379 (1326)
++++.|
T Consensus 208 ~~~~~g 213 (213)
T cd03301 208 QIQQIG 213 (213)
T ss_pred EEEecC
Confidence 999876
No 214
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=331.70 Aligned_cols=204 Identities=28% Similarity=0.371 Sum_probs=172.3
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCCCCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHDVHIG 211 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 211 (1326)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 7999999999999999999999999999999999999987 9999999998754321 357999999999899
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
.+|++||+.+.....+... ......++.+++.+||++..+.
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~----- 136 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADA----- 136 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhc-----
Confidence 9999999988654321100 0011234667899999876654
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.+++++.. ++++|+.++|+.+++.+++|++++|+
T Consensus 137 ~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 137 YPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45579999999999999999999999999999999999999999999987653 35567778888889999999999999
Q ss_pred CCeEEEEcChhhH
Q 046656 372 DGQIVYQGPCELV 384 (1326)
Q Consensus 372 ~G~iv~~G~~~~~ 384 (1326)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999998766
No 215
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=335.86 Aligned_cols=217 Identities=25% Similarity=0.331 Sum_probs=179.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56778877653 3569999999999999999999999999999999999876 46899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
. ...++.++|++|+..+++.+|+.|++.++..... ..........+.++++++.+++.+..++.++ .||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLT-----DLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcc-----cCCHH
Confidence 2 2334568999999888888999999987521100 0011112334568899999999887777653 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999986 67889999999986 6888988
Q ss_pred CCC
Q 046656 1046 PLG 1048 (1326)
Q Consensus 1046 ~~~ 1048 (1326)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 753
No 216
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.7e-36 Score=374.66 Aligned_cols=207 Identities=30% Similarity=0.443 Sum_probs=170.9
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 214 (1326)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||.++++.++ |+.++||+|++.+| +-|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCc
Confidence 5899999999999999999999999999999999999998 9999999999987765 58899999987755 679
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.++... ...+..++++...+. .| .+..++...||.||+ +..
T Consensus 563 I~eNi~l~~p~-------------------------~~~e~i~~A~~~ag~-----~~---fI~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGNPE-------------------------ATDEEIIEAAQLAGA-----HE---FIENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhCc-----HH---HHHhccccccccccc-CCC
Confidence 99999986421 111122222222111 11 233478899999995 667
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++.+ ++|+|+ ++|.. .+.+.||+|+||++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~-IaHRl-~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVII-IAHRL-STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEE-EEccc-hHhhhccEEEEccCCc
Confidence 8999999999999999999999999999999999999999999999743 455555 55543 5788999999999999
Q ss_pred EEEEcChhhHHH
Q 046656 375 IVYQGPCELVLD 386 (1326)
Q Consensus 375 iv~~G~~~~~~~ 386 (1326)
|+.+|+.+++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999975
No 217
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=326.32 Aligned_cols=194 Identities=26% Similarity=0.337 Sum_probs=164.4
Q ss_pred cceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc-cccceEEEeecCCCCCCCCCHHHHHHH
Q 046656 840 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE-TFTRISGYCEQNDIHSPLVTVYESLLY 918 (1326)
Q Consensus 840 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f 918 (1326)
|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 4589999999876431 234679999999998888999999987
Q ss_pred HHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 046656 919 SAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 998 (1326)
Q Consensus 919 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~ 998 (1326)
....+. .. .+..++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 542111 11 1233456889999999988777765 369999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 999 IVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 999 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
.+++.|++++++ |+|||++||++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999986 57778999999986 6777643
No 218
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=327.59 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=168.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVR 216 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 216 (1326)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 57999999999999999999999999999999999999887 9999999988753 246799999998888889999
Q ss_pred HHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCC
Q 046656 217 ETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGI 296 (1326)
Q Consensus 217 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 296 (1326)
||+.++....+... .+....++.+++.+||++..+.. +..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAY-----PHQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC-----cccC
Confidence 99998654322100 00112356678999998766543 4579
Q ss_pred ChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec--CCe
Q 046656 297 SGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DGQ 374 (1326)
Q Consensus 297 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 374 (1326)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.++||++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987543 34566668888888999999999999 799
Q ss_pred EEEEcChh
Q 046656 375 IVYQGPCE 382 (1326)
Q Consensus 375 iv~~G~~~ 382 (1326)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99888753
No 219
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-35 Score=330.41 Aligned_cols=211 Identities=26% Similarity=0.320 Sum_probs=174.0
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4677776552 2469999999999999999999999999999999999876 468999999987643
Q ss_pred c----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHH
Q 046656 891 E----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVE-LKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 891 ~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~vg~~~~~~LSgG 965 (1326)
. ..++.++|++|+..+++.+|+.||+.+....+. .. ..+.++++++.++ +.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCHH
Confidence 1 124568999999998898999999987643321 11 1233577788776 555556654 369999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998764 899999999986 56678999999985 799999
Q ss_pred cCCCC
Q 046656 1045 GPLGS 1049 (1326)
Q Consensus 1045 G~~~~ 1049 (1326)
|+.++
T Consensus 214 ~~~~~ 218 (230)
T TIGR03410 214 GAGDE 218 (230)
T ss_pred CCHHH
Confidence 98643
No 220
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=336.02 Aligned_cols=220 Identities=25% Similarity=0.339 Sum_probs=181.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcCcc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISGYP 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 887 (1326)
-++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 467888887653 346999999999999999999999999999999999987643 236999999987
Q ss_pred CCc--------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 046656 888 KKQ--------ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-----TEVDSETRKMFIEEIMELVELKPLRQSLV 954 (1326)
Q Consensus 888 ~~~--------~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~v 954 (1326)
+.. ...++.++|++|++.+++.+|++||+.+......+ ......+.+++++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999888989999999875321000 01112333457899999999987777765
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceee
Q 046656 955 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELF 1033 (1326)
Q Consensus 955 g~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1033 (1326)
+ .||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ .+.+.+|+++
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 4 59999999999999999999999999999999999999999999999754 899999999986 5778899999
Q ss_pred EEecCcEEEEEcCCC
Q 046656 1034 LMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 1034 ~l~~gg~~~~~G~~~ 1048 (1326)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 6889999864
No 221
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=336.43 Aligned_cols=217 Identities=27% Similarity=0.374 Sum_probs=180.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478889887663 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ..+++.++|++|+..+++.+|+.||+.+....... .........+.++++++.+++.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----SLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCH
Confidence 32 23456799999998888889999999875321100 011112234568899999999877777654 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||+|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 57788999999985 78899
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 222
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.6e-35 Score=334.54 Aligned_cols=223 Identities=25% Similarity=0.313 Sum_probs=179.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.....+ ..+++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 57788887763210000 0113579999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046656 890 QE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 960 (1326)
.. ..++.++|++|++ .+.+.+||+|++.+..... ........++.++++++.+++. ...+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 31 1345799999986 4567899999997654211 1223334455688999999996 5666654 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999986 56678999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 223
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=336.09 Aligned_cols=214 Identities=29% Similarity=0.360 Sum_probs=178.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+.++|+++.++ +.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 46778877653 12359999999999999999999999999999999999876 45899999998763
Q ss_pred c-----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 Q-----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~-----~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.++.++.++ .||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPPH-----HLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCChh-----hCC
Confidence 1 123567999999963 334579999998754221 23344445678899999999988887754 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||++. ++.+.||++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 56778999999986 79999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 224
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.4e-35 Score=326.69 Aligned_cols=213 Identities=25% Similarity=0.351 Sum_probs=175.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++.. .....+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47889998776411 011359999999999999999999999999999999999876 4689999999876
Q ss_pred Cccc------c-cceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046656 889 KQET------F-TRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~~~------~-~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 961 (1326)
.... . ++.++|++|++.+++.+|+.||+.+....+ .....+..++++++++.+++.+..++.++ .
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLPA-----Q 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCChh-----h
Confidence 4311 1 246999999998888899999998765332 12333445678999999999877776653 5
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999986 34 56999999986 67
Q ss_pred EEE
Q 046656 1041 EIY 1043 (1326)
Q Consensus 1041 ~~~ 1043 (1326)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 654
No 225
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=333.12 Aligned_cols=217 Identities=19% Similarity=0.255 Sum_probs=178.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887763 246999999999999999999999999999999999987532 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|+..+++.+||+||+.+....+. ..+.+..++.++++++.+++.+ ..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKPG-- 146 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87631 2345679999999988999999999987654321 1123344556889999999842 333333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 147 ---GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999864 689999999986 5778899999997
Q ss_pred c-----CcEEEEEcCC
Q 046656 1037 R-----GGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~-----gg~~~~~G~~ 1047 (1326)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 3 4899999875
No 226
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.1e-35 Score=346.04 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=176.6
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc----cCCc---cc---c-cceEEEee
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY----PKKQ---ET---F-TRISGYCE 901 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 901 (1326)
+...+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|. ++.. .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999887 46899999996 2221 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCc
Q 046656 902 QNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPS 981 (1326)
Q Consensus 902 Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~ 981 (1326)
|+..+++.+||+||+.|+...+ ..+..+++++++++++.++|.+..+..++ .||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875433 23455566778999999999988887764 599999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 982 IIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 982 illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999998765 899999999987 67789999999986 7999999863
No 227
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=326.01 Aligned_cols=200 Identities=26% Similarity=0.381 Sum_probs=168.2
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 214 (1326)
.++.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+|
T Consensus 11 ~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~t 86 (210)
T cd03269 11 GRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMK 86 (210)
T ss_pred CCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCc
Confidence 3456999999999999999999999999999999999999887 9999999987754 23467999999998888999
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.+.....+... .+....++++++.+||++..++. +.
T Consensus 87 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~ 127 (210)
T cd03269 87 VIDQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKR-----VE 127 (210)
T ss_pred HHHHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCc-----Hh
Confidence 9999988654322100 00112356678899998766643 45
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||||||+||++++.+|++++|||||+|||+.++..+.+.++++.+ . +.+|+.++|+.+++.+++|++++|++|+
T Consensus 128 ~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~ 205 (210)
T cd03269 128 ELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGR 205 (210)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCE
Confidence 7999999999999999999999999999999999999999999998764 2 4567778999999999999999999999
Q ss_pred EEEEc
Q 046656 375 IVYQG 379 (1326)
Q Consensus 375 iv~~G 379 (1326)
+++.|
T Consensus 206 i~~~~ 210 (210)
T cd03269 206 AVLYG 210 (210)
T ss_pred EEecC
Confidence 98764
No 228
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=337.86 Aligned_cols=217 Identities=24% Similarity=0.332 Sum_probs=176.7
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888887764110 001359999999999999999999999999999999999876 46899999998754
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046656 890 Q-------ETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGE 959 (1326)
Q Consensus 890 ~-------~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 959 (1326)
. ...++.++|++|++ .+++ .||+||+.|..... ..+.++..+.++++++.++|. ...++.+
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP----- 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----
Confidence 2 12456789999986 3444 69999998764322 223344455688999999997 3556554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 369999999999999999999999999999999999999999999998777999999999986 57778999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888875
No 229
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-35 Score=293.40 Aligned_cols=212 Identities=25% Similarity=0.361 Sum_probs=177.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.|+.++++..+... .+...||++|++.|++||-+||+|||||||||||-+|+|+.. +.+|+|.+.|++.
T Consensus 6 ii~~~~l~ktvg~~---------~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L 74 (228)
T COG4181 6 IIEVHHLSKTVGQG---------EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPL 74 (228)
T ss_pred eeehhhhhhhhcCC---------CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcch
Confidence 35566666555322 245789999999999999999999999999999999999887 4699999999986
Q ss_pred Ccc------c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046656 889 KQE------T-FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~~------~-~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 961 (1326)
... . ..+.+|+|+|...+.|++|..||+.....++..... .......+.|+.+||.+-.+...+ .
T Consensus 75 ~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~HyP~-----q 146 (228)
T COG4181 75 HKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHYPA-----Q 146 (228)
T ss_pred hhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccCcc-----c
Confidence 431 1 346899999999999999999999998887753222 223447789999999887666543 5
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
|||||+|||+||||++..|+|||-||||-+||..+...|.+++-.+.+ .|.|.|++||||. +...|||++-|.. |+
T Consensus 147 LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~ 223 (228)
T COG4181 147 LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GR 223 (228)
T ss_pred cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ce
Confidence 999999999999999999999999999999999999999999998864 5999999999985 6788999999986 67
Q ss_pred EE
Q 046656 1041 EI 1042 (1326)
Q Consensus 1041 ~~ 1042 (1326)
++
T Consensus 224 l~ 225 (228)
T COG4181 224 LV 225 (228)
T ss_pred ec
Confidence 65
No 230
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-35 Score=328.29 Aligned_cols=203 Identities=30% Similarity=0.426 Sum_probs=171.0
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--CccceEEEEccCCCCCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--VPQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 214 (1326)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 56999999999999999999999999999999999999887 99999999887532 12356999999988888999
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.+..+..+... . +....++++++.+||.+..++. +.
T Consensus 92 v~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------S------------------------EIKEEVELLLRVLGLTDKANKR-----AR 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCHHHHhCh-----hh
Confidence 9999998654332100 0 0112346678889998766654 45
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998753 3 667778899889999999999999999
Q ss_pred EEEEcChhhH
Q 046656 375 IVYQGPCELV 384 (1326)
Q Consensus 375 iv~~G~~~~~ 384 (1326)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988754
No 231
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=331.54 Aligned_cols=216 Identities=24% Similarity=0.317 Sum_probs=176.1
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC---CCeeEEEEEEc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYISGNITIS 884 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 884 (1326)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3688999988763 2459999999999999999999999999999999999743 11358999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc----cccccc
Q 046656 885 GYPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL----RQSLVG 955 (1326)
Q Consensus 885 g~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~vg 955 (1326)
|.++.. ...++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+. .+..+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHESA- 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc-
Confidence 987642 123567999999988877 599999988653321 11223334568889999998542 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 956 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 956 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|
T Consensus 148 ----~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l 221 (253)
T PRK14242 148 ----LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFF 221 (253)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999854 799999999986 577889999999
Q ss_pred ecCcEEEEEcCC
Q 046656 1036 KRGGQEIYVGPL 1047 (1326)
Q Consensus 1036 ~~gg~~~~~G~~ 1047 (1326)
++ |+++..|+.
T Consensus 222 ~~-G~i~~~g~~ 232 (253)
T PRK14242 222 YM-GKLIEVGPT 232 (253)
T ss_pred EC-CEEEEeCCH
Confidence 86 788888874
No 232
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=335.80 Aligned_cols=217 Identities=22% Similarity=0.279 Sum_probs=181.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578899988763 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.++|++|++.+++..|++|++.+....... .....+..++.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 32 22345689999999888889999999875211100 00011233456889999999988777765 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 58889999999985 78999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 225 ~g~~ 228 (265)
T PRK10253 225 QGAP 228 (265)
T ss_pred eCCH
Confidence 9885
No 233
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=340.05 Aligned_cols=218 Identities=23% Similarity=0.334 Sum_probs=176.2
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------CccceEEEEccCC-C
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------VPQRTAAYISQHD-V 208 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 208 (1326)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 99999999987531 1135799999985 2
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-cccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 287 (1326)
.+...||+||+.|+....+.. . .+....++.+++.+||. ...+
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-- 140 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------E------------------------EDAKQKAREMIELVGLPEELLA-- 140 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCChhhhh--
Confidence 344679999999875432210 0 01112357789999996 4455
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
..++.|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|++++.. .+++|++++|+.+++.++||+|
T Consensus 141 ---~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 141 ---RSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred ---CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 345679999999999999999999999999999999999999999999998653 3566777899999999999999
Q ss_pred EEecCCeEEEEcChhhHHH---HHHhcCCCCCC
Q 046656 368 ILLSDGQIVYQGPCELVLD---FFESMGFKCPE 397 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~~---~F~~lG~~~p~ 397 (1326)
++|++|+++++|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999888742 23344554443
No 234
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-35 Score=334.19 Aligned_cols=216 Identities=27% Similarity=0.400 Sum_probs=178.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45677776552 3569999999999999999999999999999999999876 45899999998764
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHH-hhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAW-LRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
. ...++.++|++|+...++..||+||+.+... .+........+..+.++++++.+++.+..++.++ .||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMS-----TLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHH
Confidence 3 1234568999999877788999999987531 1100011112234568899999999887777654 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57788999999986 6889988
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 75
No 235
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.6e-35 Score=327.93 Aligned_cols=207 Identities=24% Similarity=0.387 Sum_probs=169.6
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDV 208 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~ 208 (1326)
+++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 9 ~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 85 (222)
T cd03224 9 GYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRR 85 (222)
T ss_pred ecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccc
Confidence 334457999999999999999999999999999999999999987 9999999988754332 356999999998
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHc-CCccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVL-GLDVCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~ 287 (1326)
+++.+||+||+.++....+ . .+ ....++.+++.+ ++++..++
T Consensus 86 ~~~~~t~~~~l~~~~~~~~--~-----~~-----------------------------~~~~~~~~l~~~~~l~~~~~~- 128 (222)
T cd03224 86 IFPELTVEENLLLGAYARR--R-----AK-----------------------------RKARLERVYELFPRLKERRKQ- 128 (222)
T ss_pred cCCCCcHHHHHHHHhhhcC--c-----hh-----------------------------HHHHHHHHHHHHHhhhhhhhC-
Confidence 9999999999988653221 0 00 001123445555 45544443
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. .+++|++++|+..++.+++|+|
T Consensus 129 ----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i 202 (222)
T cd03224 129 ----LAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRA 202 (222)
T ss_pred ----chhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEE
Confidence 4557999999999999999999999999999999999999999999999864 3566777889999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+.+++.
T Consensus 203 ~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 203 YVLERGRVVLEGTAAELL 220 (222)
T ss_pred EEeeCCeEEEeCCHHHHh
Confidence 999999999999987653
No 236
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=337.86 Aligned_cols=223 Identities=25% Similarity=0.360 Sum_probs=180.5
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------CccceEEEEccCC-CC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------VPQRTAAYISQHD-VH 209 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 209 (1326)
.+|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+++.. ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987521 1235799999985 24
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-ccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTLV 288 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 288 (1326)
+...||.||+.|+....+... .+....++++++.+||. ...+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~--- 139 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWE--- 139 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhcc---
Confidence 445799999999765432110 01122356778899995 3444
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.+|++++|+.+++.++||+|+
T Consensus 140 --~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 140 --KSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred --CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEE
Confidence 45668999999999999999999999999999999999999999999998754 35667778999999999999999
Q ss_pred EecCCeEEEEcChhhHH---HHHHhcCCCCCCCCChHHH
Q 046656 369 LLSDGQIVYQGPCELVL---DFFESMGFKCPERKSVADF 404 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~---~~F~~lG~~~p~~~~~ad~ 404 (1326)
+|++|+++++|+++++. +.++..|+.+|.....++.
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 254 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQ 254 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHH
Confidence 99999999999999875 3355667777665444433
No 237
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=348.22 Aligned_cols=210 Identities=22% Similarity=0.315 Sum_probs=177.8
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEcc
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQ 205 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 205 (1326)
.++...+|+|+|+.+++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|
T Consensus 37 ~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q 113 (400)
T PRK10070 37 KTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQ 113 (400)
T ss_pred hcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEEC
Confidence 344556899999999999999999999999999999999999987 9999999998765432 247999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
+..+++++||+||+.|+....+... .+....++++++.+||++..+
T Consensus 114 ~~~l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~ 159 (400)
T PRK10070 114 SFALMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAH 159 (400)
T ss_pred CCcCCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhh
Confidence 9999999999999999765432110 001123567899999987665
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
. .++.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+++|
T Consensus 160 ~-----~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~D 233 (400)
T PRK10070 160 S-----YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGD 233 (400)
T ss_pred c-----CcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCC
Confidence 4 45679999999999999999999999999999999999999999999987653 35566778999999999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++|++++.|+++++.
T Consensus 234 ri~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 234 RIAIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEEEEECCEEEecCCHHHHH
Confidence 99999999999999988774
No 238
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-35 Score=332.75 Aligned_cols=217 Identities=21% Similarity=0.264 Sum_probs=177.7
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--C-CeeEEEEEE
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGNITI 883 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i 883 (1326)
...++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34688999988763 2369999999999999999999999999999999999864 2 135899999
Q ss_pred cCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 046656 884 SGYPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLV 954 (1326)
Q Consensus 884 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v 954 (1326)
+|.++.. ..+++.++|++|+..+++ .|++||+.+...... ..+.+..+++++++++.+++.+ ..+..+
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 154 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQSG 154 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcCC
Confidence 9987632 134567999999988777 899999987643221 2233444456889999999843 334333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeE
Q 046656 955 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFL 1034 (1326)
Q Consensus 955 g~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1034 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|++++
T Consensus 155 -----~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~ 227 (260)
T PRK10744 155 -----YSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAF 227 (260)
T ss_pred -----CCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986 4789999999986 56778999999
Q ss_pred EecCcEEEEEcCC
Q 046656 1035 MKRGGQEIYVGPL 1047 (1326)
Q Consensus 1035 l~~gg~~~~~G~~ 1047 (1326)
|++ |+++..|+.
T Consensus 228 l~~-G~i~~~g~~ 239 (260)
T PRK10744 228 MYL-GELIEFGNT 239 (260)
T ss_pred EEC-CEEEEeCCH
Confidence 985 799998875
No 239
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-35 Score=339.57 Aligned_cols=220 Identities=18% Similarity=0.237 Sum_probs=179.6
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC-C-eeEEEEEEcCcc
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YISGNITISGYP 887 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 887 (1326)
++++|+++.++.. .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776421 1124699999999999999999999999999999999998652 1 368999999988
Q ss_pred CCcc---cc----cceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc---cccccc
Q 046656 888 KKQE---TF----TRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL---RQSLVG 955 (1326)
Q Consensus 888 ~~~~---~~----~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~vg 955 (1326)
+... .. ++.++|++|++ .+.|.+|+.+++....... .....++.++++.++++.++|.+. .+...
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~--~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p- 151 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVH--QGGNKKTRRQRAIDLLNQVGIPDPASRLDVYP- 151 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhCCc-
Confidence 6431 11 23699999997 4788899998887654322 123445556778999999999753 33333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeE
Q 046656 956 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFL 1034 (1326)
Q Consensus 956 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~ 1034 (1326)
..||||||||++|||||+.+|++||+||||+|||+.++..+++.|+++.+ .|.|+|++|||++ .+.+.+|++++
T Consensus 152 ----~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 152 ----HQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 46999999999999999999999999999999999999999999999976 4999999999986 46678999999
Q ss_pred EecCcEEEEEcCC
Q 046656 1035 MKRGGQEIYVGPL 1047 (1326)
Q Consensus 1035 l~~gg~~~~~G~~ 1047 (1326)
|.+ |+++..|+.
T Consensus 227 m~~-G~ive~g~~ 238 (326)
T PRK11022 227 MYA-GQVVETGKA 238 (326)
T ss_pred EEC-CEEEEECCH
Confidence 985 799999985
No 240
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-35 Score=327.73 Aligned_cols=195 Identities=24% Similarity=0.364 Sum_probs=163.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 210 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999998875432 235799999999889
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++.+..+... .+....++++++.+||++..+.
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~---- 134 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHA---- 134 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhC----
Confidence 99999999998754322100 0011235667899999876654
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.++||+|++|
T Consensus 135 -~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 135 -LPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 3457999999999999999999999999999999999999999999998754 3 556777899998999999999999
Q ss_pred cCCeE
Q 046656 371 SDGQI 375 (1326)
Q Consensus 371 ~~G~i 375 (1326)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 241
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-35 Score=330.81 Aligned_cols=213 Identities=29% Similarity=0.407 Sum_probs=172.2
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 210 (1326)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 56999999999999999999999999999999999999887 999999998876432 135799999998889
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++..... ... .... +..+ .+....++.+++.+||.+..+.
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~---~~~~------~~~~---------------~~~~~~~~~~l~~~~l~~~~~~---- 140 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STW---RSLF------GLFP---------------KEEKQRALAALERVGLLDKAYQ---- 140 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhh---hhhc------ccCc---------------HHHHHHHHHHHHHcCChhhhCC----
Confidence 99999999987542110 000 0000 0000 0011235667889999765554
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|++++|+.+++.+++|+|++|
T Consensus 141 -~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 141 -RADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 45679999999999999999999999999999999999999999999998653 3456777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 046656 371 SDGQIVYQGPCELV 384 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~ 384 (1326)
++|++++.|+++++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998875
No 242
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-35 Score=329.84 Aligned_cols=215 Identities=22% Similarity=0.300 Sum_probs=174.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCC---CCCeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 885 (1326)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887653 246999999999999999999999999999999999962 2212489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL----RQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. ....+...+.++++++.+++.+. .+..+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 144 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKESA-- 144 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhCCc--
Confidence 87642 134567999999988776 599999987654321 11222334568899999998642 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 145 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14245 145 ---FALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY 219 (250)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999985 4899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 220 ~-G~~~~~~~~ 229 (250)
T PRK14245 220 M-GEMVEYDDT 229 (250)
T ss_pred C-CEEEEECCH
Confidence 5 799999975
No 243
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.3e-35 Score=327.83 Aligned_cols=198 Identities=25% Similarity=0.373 Sum_probs=167.7
Q ss_pred eecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHH
Q 046656 838 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYESLL 917 (1326)
Q Consensus 838 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~ 917 (1326)
|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 46899999998764322 12489999999999899999998
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 046656 918 YSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 997 (1326)
Q Consensus 918 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~ 997 (1326)
+...... ...+..+.++.++++++.+++.+..++.++ .||||||||++|||+|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRPG-----QLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7532111 123334445568899999999887777653 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 998 AIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 998 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999986 788888764
No 244
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-35 Score=326.23 Aligned_cols=212 Identities=28% Similarity=0.402 Sum_probs=179.1
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
.++|+++.++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4667776652 2469999999999999999999999999999999999877 458999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 891 E-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 891 ~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
. ..++.++|++|+...++.+|+.||+.+....+ ..+.....+.++++++.+++.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 12467899999998888899999998765433 1223334456889999999988777765 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 57788999999985 788888864
No 245
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=339.31 Aligned_cols=225 Identities=25% Similarity=0.273 Sum_probs=183.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478899987774211000 00123569999999999999999999999999999999999876 4589999999886
Q ss_pred Ccc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 046656 889 KQE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGE 959 (1326)
Q Consensus 889 ~~~------~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~ 959 (1326)
... .+++.++||+|++ .+.|.+|+.+++.+..... ......+.++++.++++.++|.+ ..++.+
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p----- 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRYP----- 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCCC-----
Confidence 431 2456799999997 5788899999987654322 12345556677999999999963 455554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
..||||||||++|||||+.+|++||+||||++||..++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999998764 999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 246
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.7e-35 Score=349.53 Aligned_cols=213 Identities=25% Similarity=0.398 Sum_probs=177.9
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVH 209 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 209 (1326)
+++.+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|.++..... ++.++||+|+..+
T Consensus 12 ~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l 88 (402)
T PRK09536 12 EFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSL 88 (402)
T ss_pred EECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCC
Confidence 344567999999999999999999999999999999999999987 9999999998765432 3679999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++..... .++.. . ..+....++++++.+||.+..+.
T Consensus 89 ~~~~tv~e~v~~~~~~~~--~~~~~---~-------------------------~~~~~~~v~~~le~vgl~~~~~~--- 135 (402)
T PRK09536 89 SFEFDVRQVVEMGRTPHR--SRFDT---W-------------------------TETDRAAVERAMERTGVAQFADR--- 135 (402)
T ss_pred CCCCCHHHHHHhccchhc--ccccC---C-------------------------CHHHHHHHHHHHHHcCCchhhcC---
Confidence 899999999998642110 00000 0 00112346778999999877764
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++
T Consensus 136 --~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~ 211 (402)
T PRK09536 136 --PVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVL 211 (402)
T ss_pred --ChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEE
Confidence 4557999999999999999999999999999999999999999999999875 3 45677789999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+++++.
T Consensus 212 l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 212 LADGRVRAAGPPADVL 227 (402)
T ss_pred EECCEEEEecCHHHHh
Confidence 9999999999998864
No 247
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=296.99 Aligned_cols=206 Identities=24% Similarity=0.379 Sum_probs=178.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVR 216 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 216 (1326)
..+|+|||+.|.+||.++++||||||||||||+++|..+|+ .|+|.+||+++.-. -..-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 45999999999999999999999999999999999999998 99999999987643 33458999999999999999
Q ss_pred HHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCC
Q 046656 217 ETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGI 296 (1326)
Q Consensus 217 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 296 (1326)
||++|+.++.|+.+. .| ..++.+.+..+||+...+ +++-.|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~-----~~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEH-----KYIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccc-----cceEee
Confidence 999999999887532 11 224567789999998776 456679
Q ss_pred ChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec--CCe
Q 046656 297 SGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DGQ 374 (1326)
Q Consensus 297 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 374 (1326)
||||||||.|||||+.+|+.|+||||+++||.-++.++.+.|-++.+.. +.-+..++|+.+|+.-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999999988765 4555668999999999999999998 589
Q ss_pred EEEEcChhhHHHH
Q 046656 375 IVYQGPCELVLDF 387 (1326)
Q Consensus 375 iv~~G~~~~~~~~ 387 (1326)
|+..-+++-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777654443
No 248
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=334.46 Aligned_cols=215 Identities=24% Similarity=0.323 Sum_probs=179.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788999877631 12469999999999999999999999999999999999876 4589999999886
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ..+++.+||++|++. .++.+|++||+.+..... ..+.++..+.++++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764321 2233444556899999999988777765 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||++||+++ ++ ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 599999999986 34 47999999985 78888
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 249
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.8e-35 Score=345.02 Aligned_cols=211 Identities=24% Similarity=0.299 Sum_probs=178.3
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCc----cCCCCCc-------cceE
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGH----DMNEFVP-------QRTA 200 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~ 200 (1326)
++++...+|+|+|+.+++||+++|+||||||||||+++|+|+++|+ +|+|.++|. ++..... ++.+
T Consensus 32 ~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 32 DETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred HhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 4556778999999999999999999999999999999999999987 999999996 3332211 2469
Q ss_pred EEEccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCC
Q 046656 201 AYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGL 280 (1326)
Q Consensus 201 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 280 (1326)
+||+|++.+++.+||+||+.|+....+... .+....++++++.+||
T Consensus 109 ~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL 154 (382)
T TIGR03415 109 SMVFQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGL 154 (382)
T ss_pred EEEECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 999999999999999999999765432210 0112235678999999
Q ss_pred cccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhH
Q 046656 281 DVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPET 360 (1326)
Q Consensus 281 ~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 360 (1326)
++..|. .+..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.... +++|+.++|+.+++
T Consensus 155 ~~~~~~-----~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~ 228 (382)
T TIGR03415 155 AQWADK-----KPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEA 228 (382)
T ss_pred chhhcC-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHH
Confidence 876664 445799999999999999999999999999999999999999999999986533 56677789999999
Q ss_pred HhhCCeEEEecCCeEEEEcChhhHH
Q 046656 361 YDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 361 ~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
.+++|+|++|++|+++..|+++++.
T Consensus 229 ~~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 229 LKIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999998874
No 250
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=364.62 Aligned_cols=222 Identities=21% Similarity=0.307 Sum_probs=186.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|..++++.+|+|.++|.++
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378889887763 3469999999999999999999999999999999999876433689999999876
Q ss_pred Cccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.... .++.+||++|++.+++.+||+||+.+....+.....+.+...+.++++++.+++.+..++.++ .|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVG-----NLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchh-----hCCH
Confidence 4321 235699999999888999999999886432211112233344568999999999887777764 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++|||+|+.+|+||||||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999986 57778999999985 789999
Q ss_pred cCCCCC
Q 046656 1045 GPLGSN 1050 (1326)
Q Consensus 1045 G~~~~~ 1050 (1326)
|+..+.
T Consensus 225 ~~~~~~ 230 (506)
T PRK13549 225 RPAAGM 230 (506)
T ss_pred cccccC
Confidence 987654
No 251
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-35 Score=330.17 Aligned_cols=206 Identities=26% Similarity=0.399 Sum_probs=172.4
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 213 (1326)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 56999999999999999999999999999999999999987 9999999988754322 35789999999999999
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc--cccccccCc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV--CADTLVGDE 291 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 291 (1326)
||+||+.++.+..+... .+....++++++.+||+. ..+ +
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~-----~ 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFAD-----R 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHh-----c
Confidence 99999998654321100 001123466788999975 334 4
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.++.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+..++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 55679999999999999999999999999999999999999999999998653 35667778888888999999999999
Q ss_pred CCeEEEEcChhhHH
Q 046656 372 DGQIVYQGPCELVL 385 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~ 385 (1326)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987663
No 252
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=320.67 Aligned_cols=203 Identities=25% Similarity=0.296 Sum_probs=183.6
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc------c-ccceEEEeecCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE------T-FTRISGYCEQNDIHS 907 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 907 (1326)
..-++|+|++|+.||++.|||-||||||||+++|.++.. +..|+|.++|.++... . .++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 457899999999999999999999999999999999887 5699999999986431 1 345789999999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 046656 908 PLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 987 (1326)
Q Consensus 908 ~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 987 (1326)
|+.||.||..|+..++ .++++++++++.+.|+.+||.++.++.+. +||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp~-----eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYPN-----ELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCcc-----cccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998766 57789999999999999999999998864 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCC
Q 046656 988 PTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGS 1049 (1326)
Q Consensus 988 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~ 1049 (1326)
|+|.|||--+..+++-|.++.++ ++|||++|||.+ |.+..-|||.+|+ +|+++..|++++
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 99999999999999999988654 899999999997 7888999999998 589999998743
No 253
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.4e-36 Score=343.41 Aligned_cols=210 Identities=28% Similarity=0.431 Sum_probs=176.7
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
-.|+|+||++++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|+|||.+
T Consensus 350 ~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~d 414 (591)
T KOG0057|consen 350 GSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQD 414 (591)
T ss_pred CcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCee
Confidence 3599999999885 23569999999999999999999999999999999999765 48999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046656 888 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLP 957 (1326)
Q Consensus 888 ~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~ 957 (1326)
++. ..+|+.+|||||+..++. -||.+|+.|+. .+.+. ++|-++.+..++.+. .++.+|+.
T Consensus 415 ik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGer 484 (591)
T KOG0057|consen 415 IKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASD----EEVVEACKRAGLHDVISRLPDGYQTLVGER 484 (591)
T ss_pred HhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCH----HHHHHHHHHcCcHHHHHhccccchhhHhhc
Confidence 754 567889999999887765 59999999863 23333 336667777777553 33456654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
|. .|||||||||+||||++.+|+|+++|||||.||.++.+.+++.+++. ..|+|+|++.|+. +..+.||+|++|++
T Consensus 485 G~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~n 560 (591)
T KOG0057|consen 485 GL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLDN 560 (591)
T ss_pred cc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEEC
Confidence 43 59999999999999999999999999999999999999999999994 4589999999986 46789999999997
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|++...|+.
T Consensus 561 -G~v~e~gth 569 (591)
T KOG0057|consen 561 -GTVKEYGTH 569 (591)
T ss_pred -CeeEEeccH
Confidence 688888985
No 254
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-35 Score=317.24 Aligned_cols=190 Identities=57% Similarity=0.934 Sum_probs=161.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++.+ .+++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46788888776421 012469999999999999999999999999999999999753224689999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
. ...++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 4 33456799999999888989999999874210 0 39999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|++|||||+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998644678899999998657998865
No 255
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=336.05 Aligned_cols=219 Identities=21% Similarity=0.294 Sum_probs=180.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 377889988774210 0012469999999999999999999999999999999999876 4689999999876
Q ss_pred Cc----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 889 KQ----ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 889 ~~----~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+.++.++++++.++|.+..++.++ .||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAPH-----LLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCC
Confidence 43 224567999999974 233468999998865322 23344555678999999999988887764 699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 999999999987 444 4999999986 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99875
No 256
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-35 Score=334.88 Aligned_cols=204 Identities=21% Similarity=0.206 Sum_probs=152.1
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY 886 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 886 (1326)
+..+.+.+|++.++.. .-+++.+++..++.-...+++|+||+||||+++++.|... +..|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc-
Confidence 3467888888766421 1168899999999999999999999999999999999665 3467776654
Q ss_pred cCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 046656 887 PKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 887 ~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~LSgG 965 (1326)
+..++|-.|...-+-.+.|.+- .+....+ +... .+.+++-+..+||.. ++... ..+||||
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSGG 486 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKT----EEEIRRHLGSFGLSGELALQS-----IASLSGG 486 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCC----HHHHHHHHHhcCCCchhhhcc-----ccccCCc
Confidence 3467898887554444444332 2222222 2222 233677889999974 23222 3469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +.-||++||+.+ -+-..|+.+.+.++|.-.-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999998875 346999999965 4666799999999866555666
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
..
T Consensus 563 ~~ 564 (582)
T KOG0062|consen 563 GI 564 (582)
T ss_pred cH
Confidence 53
No 257
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.3e-35 Score=322.14 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=167.8
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-ccccceEEEeecCCCCCCCCCHHHH
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-ETFTRISGYCEQNDIHSPLVTVYES 915 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~~Tv~E~ 915 (1326)
+++|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 4679999999999999999999999999999999877 458999999987643 2345679999999998888999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 046656 916 LLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 995 (1326)
Q Consensus 916 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~ 995 (1326)
+.+...... ... ...++.++++++.+++.+..++.+ ..||+|||||++|||+|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532111 111 222446788999999988777765 369999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC
Q 046656 996 AAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1046 (1326)
Q Consensus 996 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~ 1046 (1326)
++..+.+.|+++.++ |+|||++||++. ++.+.+|++++|++ |+++..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 56778999999985 79888875
No 258
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.4e-35 Score=339.30 Aligned_cols=224 Identities=20% Similarity=0.286 Sum_probs=181.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcCcc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISGYP 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 887 (1326)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 57899998776421 12356999999999999999999999999999999999987632 238999999988
Q ss_pred CCcc---c---cc-ceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 046656 888 KKQE---T---FT-RISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPG 958 (1326)
Q Consensus 888 ~~~~---~---~~-~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 958 (1326)
+... . ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+..-. .
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~~--~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMKM--Y 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhcC--C
Confidence 6431 1 12 4799999997 67889999999977543321 23445556678999999999753322111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
+.+||||||||++|||||+.+|++||+||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 3569999999999999999999999999999999999999999999999765 899999999986 46678999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999985
No 259
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=334.14 Aligned_cols=204 Identities=26% Similarity=0.311 Sum_probs=170.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 212 (1326)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 45999999999999999999999999999999999999987 9999999988764322 356999999852 4567
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+||+.|+....+.. + .+....++.+++.+||.+..+. .
T Consensus 95 ~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~-----~ 135 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD----------K------------------------DEVERRVEEALKAVRMWDFRDK-----P 135 (274)
T ss_pred CcHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcC-----C
Confidence 89999999864422110 0 0111235678899999876664 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.++||+|++|++
T Consensus 136 ~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 136 PYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKE 213 (274)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 557999999999999999999999999999999999999999999999864 3 56677789999999999999999999
Q ss_pred CeEEEEcChhhH
Q 046656 373 GQIVYQGPCELV 384 (1326)
Q Consensus 373 G~iv~~G~~~~~ 384 (1326)
|+++++|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 260
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-35 Score=318.13 Aligned_cols=196 Identities=29% Similarity=0.581 Sum_probs=163.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-eeEEEEEEcCcc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGNITISGYP 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 887 (1326)
.+.|+|++|.++.+ .+++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999988643 13457999999999999999999999999999999999987632 568999999987
Q ss_pred CCc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 888 KKQ--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 888 ~~~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
... ...++.++|++|++.+++.+||+||+.+..... .+..+ ..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~~-----~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEFV-----RGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccch-----hhCCHH
Confidence 643 234567999999999999999999998753211 22222 359999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 678777766543467888999999996 688775
Q ss_pred c
Q 046656 1045 G 1045 (1326)
Q Consensus 1045 G 1045 (1326)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 261
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=331.84 Aligned_cols=216 Identities=24% Similarity=0.279 Sum_probs=177.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999998653 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ..+++.++|++|++.+++. |+.||+.+....+.. ........+.++++++.+++.+ ..+..+
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 161 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEPG-- 161 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCCc--
Confidence 87642 1245678999999887774 999999986543311 1122333456889999999964 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+
T Consensus 162 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 162 ---TGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 789999999986 5677899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 799998874
No 262
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.1e-35 Score=326.41 Aligned_cols=201 Identities=30% Similarity=0.411 Sum_probs=169.5
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEee-cCCCCCCC
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ--ETFTRISGYCE-QNDIHSPL 909 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 909 (1326)
+.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 44679999999999999999999999999999999999876 468999999986432 23456789997 55667788
Q ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 046656 910 VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 989 (1326)
Q Consensus 910 ~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPt 989 (1326)
+|++|++.+...++ ....++..+.++++++.+++.+..++.++ .||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765432 22334445567889999999887777653 59999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 990 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 990 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 57788999999985 6887654
No 263
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=333.37 Aligned_cols=219 Identities=25% Similarity=0.361 Sum_probs=177.3
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC------eeEEEEEE
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YISGNITI 883 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i 883 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 46777776652 346999999999999999999999999999999999987632 12799999
Q ss_pred cCccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046656 884 SGYPKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGE 959 (1326)
Q Consensus 884 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 959 (1326)
+|.+... ..+++.++|++|++..++.+|++||+.+...... .......+.++.++++++.+++.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987642 2344568999999876667899999987532111 011111233456889999999988777665
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHh
Q 046656 960 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAF 1029 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~---------~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 1029 (1326)
..||||||||++|||+|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 369999999999999999 599999999999999999999999999998765 899999999986 577789
Q ss_pred ceeeEEecCcEEEEEcCCC
Q 046656 1030 DELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 1030 D~v~~l~~gg~~~~~G~~~ 1048 (1326)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7999998853
No 264
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=339.08 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=170.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCC-----------------------
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNE----------------------- 193 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 193 (1326)
..+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 8999999875421
Q ss_pred ----CCccceEEEEccCC-CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHH
Q 046656 194 ----FVPQRTAAYISQHD-VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEAN 268 (1326)
Q Consensus 194 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~ 268 (1326)
...++.+|||+|++ ..+...||+||+.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 01135799999984 34556899999998754432110 0112
Q ss_pred HHHHHHHHHcCCc-ccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 046656 269 VLTDYYLKVLGLD-VCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNG 347 (1326)
Q Consensus 269 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~ 347 (1326)
..++++++.+||+ +..+ +.+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+
T Consensus 143 ~~~~~~l~~~gL~~~~~~-----~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQ-----RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QG 215 (305)
T ss_pred HHHHHHHHHcCCChhhhh-----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CC
Confidence 2356789999996 4444 45668999999999999999999999999999999999999999999999863 35
Q ss_pred EEEEEEecChhhHHhhCCeEEEecCCeEEEEcChhhHH
Q 046656 348 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 348 t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
.+|++++|+.+++.++||+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 66777899999999999999999999999999998875
No 265
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-35 Score=323.50 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=166.7
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-CccceEEEEccCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-VPQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~ 212 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.
T Consensus 10 ~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (208)
T cd03268 10 YGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPN 86 (208)
T ss_pred ECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCcc
Confidence 34457999999999999999999999999999999999999887 99999999876532 123579999999888999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.+.....+. ....++++++.+||++..+..
T Consensus 87 ~tv~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~----- 123 (208)
T cd03268 87 LTARENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKK----- 123 (208)
T ss_pred CcHHHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhh-----
Confidence 9999999886432110 001245678888998766643
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+++.++|+.+++.+++|++++|++
T Consensus 124 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~ 201 (208)
T cd03268 124 VKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINK 201 (208)
T ss_pred HhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998764 3 45666688999899999999999999
Q ss_pred CeEEEEc
Q 046656 373 GQIVYQG 379 (1326)
Q Consensus 373 G~iv~~G 379 (1326)
|++++.|
T Consensus 202 g~i~~~g 208 (208)
T cd03268 202 GKLIEEG 208 (208)
T ss_pred CEEEecC
Confidence 9998765
No 266
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.9e-34 Score=365.80 Aligned_cols=208 Identities=28% Similarity=0.378 Sum_probs=177.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+|+|+. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 6899999998842 22469999999999999999999999999999999999987 4699999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLR-------QSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~~ 958 (1326)
++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 54 456788999999998876 59999998742 1 22 23477888888887543 4556543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|++||+++ ..+.+|+|++|++
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999876 689999999985 5677999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 799999985
No 267
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.9e-35 Score=326.27 Aligned_cols=201 Identities=27% Similarity=0.402 Sum_probs=172.9
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc-cccceEEEeecCCCCCCCCCHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE-TFTRISGYCEQNDIHSPLVTVY 913 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~~Tv~ 913 (1326)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +..|+|.++|.++... ..++.++|++|++.+++..|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999876 4589999999876432 2345799999999888889999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 046656 914 ESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 993 (1326)
Q Consensus 914 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD 993 (1326)
||+.+....+ ........+.++++++.+++.+..++..+ .||+||+||++|||+|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYPN-----QLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765432 12233334567899999999887777653 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 994 ARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 994 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999998765 899999999986 57788999999985 788998885
No 268
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2e-35 Score=326.32 Aligned_cols=195 Identities=27% Similarity=0.387 Sum_probs=162.4
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-------ccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-------PQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 209 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 57999999999999999999999999999999999999987 999999998876432 13579999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++....+... .+....++.+++.+||++..+.
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~--- 136 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNH--- 136 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhc---
Confidence 999999999998654322100 0011235667899999876654
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++. .||++++
T Consensus 137 --~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 137 --YPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred --ChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 44579999999999999999999999999999999999999999999998652 2456666788887776 9999999
Q ss_pred ecCCeE
Q 046656 370 LSDGQI 375 (1326)
Q Consensus 370 L~~G~i 375 (1326)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 269
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.9e-35 Score=333.68 Aligned_cols=208 Identities=21% Similarity=0.330 Sum_probs=172.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVH 209 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 209 (1326)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+..+
T Consensus 19 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 95 (269)
T PRK11831 19 NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGAL 95 (269)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEeccccc
Confidence 456999999999999999999999999999999999999887 999999998875432 13569999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++...... .+ .. +....++.+++.+||++..+..
T Consensus 96 ~~~~tv~enl~~~~~~~~~---~~------~~------------------------~~~~~~~~~l~~~gl~~~~~~~-- 140 (269)
T PRK11831 96 FTDMNVFDNVAYPLREHTQ---LP------AP------------------------LLHSTVMMKLEAVGLRGAAKLM-- 140 (269)
T ss_pred CCCCCHHHHHHHHHHHccC---CC------HH------------------------HHHHHHHHHHHHcCChhhhhCC--
Confidence 8999999999885422100 00 00 0112345678899998766654
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.++||+|++
T Consensus 141 ---~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~ 216 (269)
T PRK11831 141 ---PSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYI 216 (269)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEE
Confidence 4579999999999999999999999999999999999999999999998653 356677788999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+++++.
T Consensus 217 l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 217 VADKKIVAHGSAQALQ 232 (269)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 270
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-35 Score=322.97 Aligned_cols=192 Identities=29% Similarity=0.367 Sum_probs=161.2
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCC-CCCCCCH
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDV-HIGEMTV 215 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 215 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 57999999999999999999999999999999999999987 9999999988754333467999999863 3457899
Q ss_pred HHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccC
Q 046656 216 RETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRG 295 (1326)
Q Consensus 216 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 295 (1326)
+||+.++....+ . ....++++++.+||++..++. +..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERH-----PLS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCC-----chh
Confidence 999987543210 0 001245678999998766644 457
Q ss_pred CChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeE
Q 046656 296 ISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQI 375 (1326)
Q Consensus 296 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 375 (1326)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA--QGKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 355667788998899999999999999997
Q ss_pred E
Q 046656 376 V 376 (1326)
Q Consensus 376 v 376 (1326)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 271
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=332.22 Aligned_cols=215 Identities=24% Similarity=0.297 Sum_probs=179.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788999887631 11358999999999999999999999999999999999876 4689999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.++|++|++. +++..|+.+|+.|..... ....+...+.++++++.+++.+..+..+ ..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999974 677789999998864322 2233444556889999999988777665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 454 4999999985 79999
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 9885
No 272
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=328.07 Aligned_cols=215 Identities=21% Similarity=0.279 Sum_probs=175.1
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC-CeeEEEEEEcCccC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYISGNITISGYPK 888 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 888 (1326)
++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778877663 24699999999999999999999999999999999997642 24689999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL----RQSLVGLPGESG 961 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~vg~~~~~~ 961 (1326)
.. ...++.++|++|++.+++ .|++||+.+....+.... .....+++++++++.+++.+. .+.. ...
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 43 234567999999988887 699999988654331111 122334567889999999532 3332 246
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999986 57788999999985 799
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
+..|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 998874
No 273
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=336.58 Aligned_cols=219 Identities=19% Similarity=0.311 Sum_probs=177.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++... .....+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478899988764210 001359999999999999999999999999999999999876 4589999999875
Q ss_pred Cc--------ccccceEEEeecCCCC-CCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 046656 889 KQ--------ETFTRISGYCEQNDIH-SPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPG 958 (1326)
Q Consensus 889 ~~--------~~~~~~~gyv~Q~~~~-~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~ 958 (1326)
.. ...++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 31 2345679999999632 23469999998864321 223344445688899999994 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 369999999999999999999999999999999999999999999998754 899999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 789988874
No 274
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=328.29 Aligned_cols=209 Identities=25% Similarity=0.352 Sum_probs=174.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888887653 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.++|++|++.+++ .|++||+.+....+ . . ..+.++++++.+++. +..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRDV-----KNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCCc-----ccCCH
Confidence 32 234567999999988776 69999998753321 1 1 124578899999996 4555544 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57778999999986 68888
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 275
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.9e-35 Score=321.02 Aligned_cols=189 Identities=23% Similarity=0.356 Sum_probs=162.2
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-------ETFTRISGYCEQNDIHS 907 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~ 907 (1326)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 468999999987431 12346799999999888
Q ss_pred CCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 046656 908 PLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 987 (1326)
Q Consensus 908 ~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 987 (1326)
+..|++||+.+..... ........+.++++++.+++.+..++.+. .||+|||||++|||+|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKIY-----ELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999999865432 22334445678899999999887777653 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 988 PTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 988 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
||+|||+.++..+.+.|+++.++|.|||++||++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999975 34679999875
No 276
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3e-35 Score=324.84 Aligned_cols=198 Identities=29% Similarity=0.426 Sum_probs=166.6
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--CccceEEEEccCCCCCCCCCH
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--VPQRTAAYISQHDVHIGEMTV 215 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 215 (1326)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 99999999887532 123579999999988898999
Q ss_pred HHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccC
Q 046656 216 RETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRG 295 (1326)
Q Consensus 216 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 295 (1326)
+||+.+.....+.. . .+....++++++.+||++..+. .+..
T Consensus 96 ~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------G------------------------DELTARLEELADRLGMEELLDR-----RVGG 136 (218)
T ss_pred HHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhh-----hhhh
Confidence 99998754332110 0 0112235678899999876664 4457
Q ss_pred CChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeE
Q 046656 296 ISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQI 375 (1326)
Q Consensus 296 LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 375 (1326)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+.+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 355677788998899999999999999999
Q ss_pred EEEc
Q 046656 376 VYQG 379 (1326)
Q Consensus 376 v~~G 379 (1326)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8754
No 277
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6e-35 Score=326.25 Aligned_cols=207 Identities=27% Similarity=0.389 Sum_probs=170.9
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc--cceEEEEccCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP--QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~ 212 (1326)
+++++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~ 88 (236)
T TIGR03864 12 GARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLD 88 (236)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCccc
Confidence 3457999999999999999999999999999999999999987 9999999987754322 2579999999888889
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.+.....+.. . .+....++++++.+||+...++.
T Consensus 89 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~----- 129 (236)
T TIGR03864 89 LSVRQNLRYHAALHGLS----------R------------------------AEARERIAALLARLGLAERADDK----- 129 (236)
T ss_pred CcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCC-----
Confidence 99999998754332110 0 00112346678889998766644
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+.++++++|+.+++. .+|++++|++
T Consensus 130 ~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~i~~l~~ 207 (236)
T TIGR03864 130 VRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIE-ADDRLVVLHR 207 (236)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHh-hCCEEEEEeC
Confidence 4579999999999999999999999999999999999999999999998643 3456666888888876 4999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (236)
T TIGR03864 208 GRVLADGAAAELR 220 (236)
T ss_pred CeEEEeCCHHHHH
Confidence 9999999988764
No 278
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.1e-35 Score=330.28 Aligned_cols=214 Identities=25% Similarity=0.339 Sum_probs=172.0
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVH 209 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 209 (1326)
++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNL 90 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcc
Confidence 456999999999999999999999999999999999999887 999999998875432 24569999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++..... ..+. ... +..+ .+....++++++.+||++..+.
T Consensus 91 ~~~~tv~~~l~~~~~~~~--~~~~---~~~------~~~~---------------~~~~~~~~~~l~~~~l~~~~~~--- 141 (243)
T TIGR02315 91 IERLTVLENVLHGRLGYK--PTWR---SLL------GRFS---------------EEDKERALSALERVGLADKAYQ--- 141 (243)
T ss_pred cccccHHHHHhhcccccc--cchh---hhh------cccc---------------HHHHHHHHHHHHHcCcHhhhcC---
Confidence 999999999987532110 0000 000 0000 0011235667889999765554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||+|++
T Consensus 142 --~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~ 218 (243)
T TIGR02315 142 --RADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVG 218 (243)
T ss_pred --CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEE
Confidence 45679999999999999999999999999999999999999999999998653 355677788999899999999999
Q ss_pred ecCCeEEEEcChhhH
Q 046656 370 LSDGQIVYQGPCELV 384 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~ 384 (1326)
|++|++++.|+++++
T Consensus 219 l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 219 LKAGEIVFDGAPSEL 233 (243)
T ss_pred EECCEEEecCCHHHh
Confidence 999999999988765
No 279
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=334.16 Aligned_cols=217 Identities=23% Similarity=0.302 Sum_probs=180.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCe-eEEEEEEcCcc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ISGNITISGYP 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 887 (1326)
.++++|+++.++. ..+.+|+|+|++|++||+++|+|+||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788888877631 12359999999999999999999999999999999999876321 13999999988
Q ss_pred CCcc---cccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 888 KKQE---TFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 888 ~~~~---~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.... ..++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 6432 23567899999974 566789999998764322 2344555567899999999998777765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1042 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1042 (1326)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999986 34 57999999985 7999
Q ss_pred EEcCC
Q 046656 1043 YVGPL 1047 (1326)
Q Consensus 1043 ~~G~~ 1047 (1326)
..|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99975
No 280
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=320.16 Aligned_cols=224 Identities=23% Similarity=0.335 Sum_probs=180.3
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC-C--CeeEEEEEEcCc
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYISGNITISGY 886 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~--~~~~G~i~i~g~ 886 (1326)
++.+|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|+.+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4567776655432 123579999999999999999999999999999999999875 2 256789999998
Q ss_pred cCCc---c---c-ccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCC-CHHHHHHHHHHHHHHcCCcccccccccC
Q 046656 887 PKKQ---E---T-FTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEV-DSETRKMFIEEIMELVELKPLRQSLVGL 956 (1326)
Q Consensus 887 ~~~~---~---~-~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~-~~~~~~~~v~~~l~~l~l~~~~~~~vg~ 956 (1326)
++-. . . .-+.+++++|++ .+.|.+||.+.+.-...... .. .+++..+++.++|+.+++.+-....-..
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRLKSY 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHHhhC
Confidence 6522 1 1 224789999996 46788999887765443321 12 3455677899999999998643222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
| .+|||||||||.||.||+.+|++||.||||++||...+++|+++|+++.+ .|.|+|++|||+. -+.+.+|||+||
T Consensus 151 P--helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VM 227 (316)
T COG0444 151 P--HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVM 227 (316)
T ss_pred C--cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEE
Confidence 2 46999999999999999999999999999999999999999999999986 5999999999997 488899999999
Q ss_pred ecCcEEEEEcCCC
Q 046656 1036 KRGGQEIYVGPLG 1048 (1326)
Q Consensus 1036 ~~gg~~~~~G~~~ 1048 (1326)
. .|++|..|+..
T Consensus 228 Y-aG~iVE~g~~~ 239 (316)
T COG0444 228 Y-AGRIVEEGPVE 239 (316)
T ss_pred E-CcEEEEeCCHH
Confidence 9 58999999963
No 281
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.32 Aligned_cols=216 Identities=22% Similarity=0.288 Sum_probs=177.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--CC-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 467888887763 2469999999999999999999999999999999999864 21 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ..+++.++|++|+..+++.+|++||+.+...... ..+..+.++.++++++.+++.. ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKSN--- 145 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2346679999999988998999999987543221 1223333456788999999854 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.||++++|.
T Consensus 146 --~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14256 146 --AMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY 221 (252)
T ss_pred --cCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE
Confidence 246999999999999999999999999999999999999999999999875 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14256 222 M-GDLVECGET 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 282
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-35 Score=324.35 Aligned_cols=199 Identities=30% Similarity=0.396 Sum_probs=171.6
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc-cccceEEEeecCCCCCCCCCHHHH
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE-TFTRISGYCEQNDIHSPLVTVYES 915 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~~Tv~E~ 915 (1326)
+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 4689999999876431 234578999999988989999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 046656 916 LLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 995 (1326)
Q Consensus 916 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~ 995 (1326)
+.+..... .....+..+.+.++++.++|.+..++.+. .||||||||++|||||+++|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKPE-----TLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764322 12333444567889999999887777753 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 996 AAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 996 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
++..+.+.|+++..+ |+|||++||++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999986 57778999999985 788988874
No 283
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-35 Score=331.47 Aligned_cols=214 Identities=22% Similarity=0.266 Sum_probs=175.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.+.++|+++.++ .+.+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999987763 24699999999999999999999999999999999998642 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..+
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 152 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNESG-- 152 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCCc--
Confidence 87531 234567999999988887 499999988654321 112 22345778888888742 334333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.||++++|+
T Consensus 153 ---~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 153 ---YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 46999999999999999999999999999999999999999999999854 799999999986 6788999999998
Q ss_pred c----------CcEEEEEcCC
Q 046656 1037 R----------GGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~----------gg~~~~~G~~ 1047 (1326)
+ +|++++.|+.
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 6 3678999875
No 284
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=338.04 Aligned_cols=216 Identities=22% Similarity=0.404 Sum_probs=174.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------------------Ccc
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------------------VPQ 197 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 197 (1326)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35899999999999999999999999999999999999987 99999999886532 113
Q ss_pred ceEEEEccCC--CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHH
Q 046656 198 RTAAYISQHD--VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYL 275 (1326)
Q Consensus 198 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l 275 (1326)
+.++||+|++ .++ ..||+||+.|+....+.. . .+....+++++
T Consensus 116 ~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVK----------K------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhccc-cchHHHHHHhhHHhcCCC----------H------------------------HHHHHHHHHHH
Confidence 6799999985 344 469999999865322110 0 01112356678
Q ss_pred HHcCCc-ccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEe
Q 046656 276 KVLGLD-VCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLL 354 (1326)
Q Consensus 276 ~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~ 354 (1326)
+.+||+ ...+ +.+..|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|+++.. .+++|++++
T Consensus 161 ~~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVIT 233 (320)
T ss_pred HHcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEe
Confidence 999996 3343 45668999999999999999999999999999999999999999999998754 356677789
Q ss_pred cChhhHHhhCCeEEEecCCeEEEEcChhhHH---HHHHhcCCCCCC
Q 046656 355 QPAPETYDLFDDIILLSDGQIVYQGPCELVL---DFFESMGFKCPE 397 (1326)
Q Consensus 355 q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~F~~lG~~~p~ 397 (1326)
|+.+++.++||+|++|++|++++.|+++++. +.++..|+.+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9998899999999999999999999998874 234455665554
No 285
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=338.33 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=178.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC--CeeEEEEEEcCc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYISGNITISGY 886 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~ 886 (1326)
-+.++|+++.++.. .+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 36788888776421 1235699999999999999999999999999999999998652 246899999998
Q ss_pred cCCcc---c----ccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCC---CCHHHHHHHHHHHHHHcCCccc---cc
Q 046656 887 PKKQE---T----FTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTE---VDSETRKMFIEEIMELVELKPL---RQ 951 (1326)
Q Consensus 887 ~~~~~---~----~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~---~~ 951 (1326)
++... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.++|.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76431 1 1246999999975 5688999999976422110000 1122345578899999999753 33
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhc
Q 046656 952 SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFD 1030 (1326)
Q Consensus 952 ~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D 1030 (1326)
+.. ..||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|
T Consensus 154 ~~p-----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SFP-----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CCc-----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 433 469999999999999999999999999999999999999999999999864 999999999986 5778899
Q ss_pred eeeEEecCcEEEEEcCC
Q 046656 1031 ELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1031 ~v~~l~~gg~~~~~G~~ 1047 (1326)
++++|.+ |+++..|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999985 799999985
No 286
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=333.37 Aligned_cols=216 Identities=21% Similarity=0.324 Sum_probs=175.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCC-CCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHD-VHIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 212 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998764322 35799999986 36778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+||+.|+.+..+... .+....++++++.+||++..+. .
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~-----~ 137 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKER-----E 137 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhC-----C
Confidence 899999998654322100 0112235678999999876654 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++++++. .+++|++++|+.+++ ..||+|++|++
T Consensus 138 ~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 138 PARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 5679999999999999999999999999999999999999999999998653 356666678888887 58999999999
Q ss_pred CeEEEEcChhhHHH---HHHhcCCCCC
Q 046656 373 GQIVYQGPCELVLD---FFESMGFKCP 396 (1326)
Q Consensus 373 G~iv~~G~~~~~~~---~F~~lG~~~p 396 (1326)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999987752 2334455433
No 287
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.4e-35 Score=327.53 Aligned_cols=207 Identities=20% Similarity=0.328 Sum_probs=172.3
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-----ccceEEEEccCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-----PQRTAAYISQHDVH 209 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 209 (1326)
+++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 88 (240)
T PRK09493 12 GPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYL 88 (240)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEeccccc
Confidence 3456999999999999999999999999999999999999887 999999998875421 13579999999888
Q ss_pred CCCCCHHHHHHhhhhh-ccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 210 IGEMTVRETLAFSARC-QGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
++.+||+||+.|+... .+.. . .+....++++++.+||+...+.
T Consensus 89 ~~~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~-- 132 (240)
T PRK09493 89 FPHLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHH-- 132 (240)
T ss_pred CCCCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhc--
Confidence 8899999999885421 1100 0 0011234677889999765554
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
.++.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+.+++.++||+++
T Consensus 133 ---~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~ 207 (240)
T PRK09493 133 ---YPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLI 207 (240)
T ss_pred ---ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4567999999999999999999999999999999999999999999998754 2 5567778899999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++++.|+.+++.
T Consensus 208 ~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 208 FIDKGRIAEDGDPQVLI 224 (240)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999988764
No 288
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=329.06 Aligned_cols=222 Identities=22% Similarity=0.258 Sum_probs=178.9
Q ss_pred CCceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEE
Q 046656 806 EPYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNIT 882 (1326)
Q Consensus 806 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~ 882 (1326)
.+..+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344689999988763 24699999999999999999999999999999999998653 14689999
Q ss_pred EcCccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 046656 883 ISGYPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLP 957 (1326)
Q Consensus 883 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 957 (1326)
++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+.....
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~- 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK- 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-
Confidence 99987632 123567999999988777 59999998864321 1112334456688899999985322111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
....||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|++
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~ 237 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL 237 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC
Confidence 134699999999999999999999999999999999999999999999985 4799999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 238 -G~i~~~g~~ 246 (267)
T PRK14237 238 -GDLIEYDKT 246 (267)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 289
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-35 Score=320.60 Aligned_cols=191 Identities=25% Similarity=0.379 Sum_probs=163.2
Q ss_pred cceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 046656 840 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 840 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
|+|++|++ |+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999876 458999999987531 1235679999999988888999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+||+.+..... .....++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764221 22233456889999999987766655 369999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 993 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 56778999999986 6877654
No 290
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.6e-35 Score=328.99 Aligned_cols=206 Identities=23% Similarity=0.338 Sum_probs=171.5
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-----------CccceEEEEc
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-----------VPQRTAAYIS 204 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~ 204 (1326)
.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~ 91 (250)
T PRK11264 15 GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVF 91 (250)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEe
Confidence 456999999999999999999999999999999999999887 99999999887532 1235799999
Q ss_pred cCCCCCCCCCHHHHHHhhhhh-ccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 205 QHDVHIGEMTVRETLAFSARC-QGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
|++.+++.+||+||+.++... .+.. . .+....++.+++.+||+..
T Consensus 92 q~~~~~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~ 137 (250)
T PRK11264 92 QNFNLFPHRTVLENIIEGPVIVKGEP----------K------------------------EEATARARELLAKVGLAGK 137 (250)
T ss_pred cCcccCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCcch
Confidence 998888899999999885321 1100 0 0011234667888999876
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
.|+ .++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.++
T Consensus 138 ~~~-----~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~ 210 (250)
T PRK11264 138 ETS-----YPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDV 210 (250)
T ss_pred hhC-----ChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHh
Confidence 554 4567999999999999999999999999999999999999999999998864 2 45667789999999999
Q ss_pred CCeEEEecCCeEEEEcChhhHH
Q 046656 364 FDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
+|+|++|++|++++.|+.+++.
T Consensus 211 ~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 211 ADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred cCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999988763
No 291
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=325.06 Aligned_cols=211 Identities=24% Similarity=0.305 Sum_probs=175.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++. + ..|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 467788877631 1 238999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 890 QE-TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 890 ~~-~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..++.+. .|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLPG-----QLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHHHH
Confidence 32 12456899999999899899999998753211 111 12334568999999999888887764 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999986 57788999999985 799999875
No 292
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.3e-35 Score=337.72 Aligned_cols=209 Identities=22% Similarity=0.261 Sum_probs=175.0
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCC--
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHD-- 207 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 207 (1326)
...+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 356999999999999999999999999999999999999987 9999999998865432 35799999996
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-ccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADT 286 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 286 (1326)
.++|.+||.||+.+..+..... ..+ .+....++++++.+||. ...
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~------------------------~~~~~~~~~~l~~vgl~~~~~-- 155 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSR------------------------QEVKDRVKAMMLKVGLLPNLI-- 155 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCH------------------------HHHHHHHHHHHHHcCCChHHh--
Confidence 5788999999999865432100 000 01122356778999994 333
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
+..+..|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 156 ---~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 156 ---NRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred ---cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCE
Confidence 3566789999999999999999999999999999999999999999999998653 356777799999999999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998874
No 293
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-35 Score=321.99 Aligned_cols=199 Identities=30% Similarity=0.420 Sum_probs=166.8
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--ccceEEEEccCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 212 (1326)
..+++|+|+|+.+++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 11 ~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (211)
T cd03264 11 GKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPN 86 (211)
T ss_pred CCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCccccc
Confidence 3456999999999999 99999999999999999999999987 999999998875432 24679999999988999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.+.....+... .+....++.+++.+||++..++.
T Consensus 87 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 127 (211)
T cd03264 87 FTVREFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKK----- 127 (211)
T ss_pred CCHHHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCc-----
Confidence 999999998654321100 00112356778899998766654
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. + ++++.++|+.+++.+++|++++|++
T Consensus 128 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03264 128 IGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNK 204 (211)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998753 3 5677788999999999999999999
Q ss_pred CeEEEEc
Q 046656 373 GQIVYQG 379 (1326)
Q Consensus 373 G~iv~~G 379 (1326)
|++++.|
T Consensus 205 g~i~~~g 211 (211)
T cd03264 205 GKLVFEG 211 (211)
T ss_pred CEEEecC
Confidence 9998765
No 294
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=342.18 Aligned_cols=190 Identities=25% Similarity=0.394 Sum_probs=167.5
Q ss_pred cceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 046656 840 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 840 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 458999999987532 1245679999999999999999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+||+.|+.. ...++.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 1123458899999999888877753 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 993 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999986 67888999999985 799999985
No 295
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.7e-35 Score=330.09 Aligned_cols=224 Identities=21% Similarity=0.266 Sum_probs=179.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++.+.. +...+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3788999887742100 000012469999999999999999999999999999999999877 4689999999876
Q ss_pred Ccc---cccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCC
Q 046656 889 KQE---TFTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGL 962 (1326)
Q Consensus 889 ~~~---~~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~L 962 (1326)
... ..++.++|++|++. +.+.+|+.|++.+..... .........+.++++++.+++. +..+..+ ..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN--TDLEPEQREKQIIETLRQVGLLPDHASYYP-----HML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhc
Confidence 421 22356899999874 567789999998765432 1223334445688999999994 5555554 369
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 963 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 963 SgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
|||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++...||++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999986 57778999999985 788
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
++.|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888874
No 296
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=359.92 Aligned_cols=219 Identities=26% Similarity=0.342 Sum_probs=184.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|++++++ ++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67888887763 3469999999999999999999999999999999999876 45899999998764
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 890 QE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLR-TEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 890 ~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ..++.+||++|++.+++.+||+|++.|+...+.. ...+..+.++.++++++.++|.+..++.++ .|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCH
Confidence 21 1235689999999888999999999886432211 112233344568899999999988777764 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|.|||++|||++ ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 799999
Q ss_pred cCCCCC
Q 046656 1045 GPLGSN 1050 (1326)
Q Consensus 1045 G~~~~~ 1050 (1326)
|+..+.
T Consensus 223 ~~~~~~ 228 (501)
T PRK10762 223 REVADL 228 (501)
T ss_pred cCcCcC
Confidence 987654
No 297
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=324.17 Aligned_cols=201 Identities=24% Similarity=0.330 Sum_probs=166.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 209 (1326)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.+.....+... .+....++++++.+||++..+.
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~--- 141 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANH--- 141 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhC---
Confidence 899999999998654321100 0011235677899999876654
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.+..|||||||||+||++++.+|+++||||||+|||+.++..+.+.|+++... ++++|+.++|+.+++.. +|++++
T Consensus 142 --~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 142 --RPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 34579999999999999999999999999999999999999999999987543 35566668888887766 589999
Q ss_pred ecCCeEEEEcCh
Q 046656 370 LSDGQIVYQGPC 381 (1326)
Q Consensus 370 L~~G~iv~~G~~ 381 (1326)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 298
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8.6e-35 Score=342.47 Aligned_cols=194 Identities=25% Similarity=0.390 Sum_probs=169.3
Q ss_pred cceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-------ccccceEEEeecCCCCCCCCCH
Q 046656 840 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 840 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 458999999987632 1235679999999999999999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+||+.|+.... ...+.++.++++++.++|.+..++.++ .||||||||++|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLPG-----RLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 123334568999999999988887753 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 993 DARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999986 67788999999986 799999875
No 299
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-35 Score=337.24 Aligned_cols=207 Identities=28% Similarity=0.422 Sum_probs=169.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 213 (1326)
++||+++||+|++||-+||+|+|||||||+|++|.+..+ . +|+|.+||.++.+... |+.+|||||+..+| +.
T Consensus 365 ~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-nd 439 (591)
T KOG0057|consen 365 RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-ND 439 (591)
T ss_pred CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-ch
Confidence 459999999999999999999999999999999999998 4 8999999999876654 57899999976655 67
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||.+||.++..- ..++.+.+.|++ +++ .|. ...|++..+|.||+++.
T Consensus 440 TIl~NI~YGn~s----as~eeV~e~~k~---a~~-----------------------hd~---i~~l~~GY~T~VGerG~ 486 (591)
T KOG0057|consen 440 TILYNIKYGNPS----ASDEEVVEACKR---AGL-----------------------HDV---ISRLPDGYQTLVGERGL 486 (591)
T ss_pred hHHHHhhcCCCC----cCHHHHHHHHHH---cCc-----------------------HHH---HHhccccchhhHhhccc
Confidence 999999997432 122223333332 211 111 22478899999997654
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
-|||||||||++|||++.+|+|+++|||||.||+.|..++++.+.+. .++.|+|.+.|+. .+...||+|++|++|
T Consensus 487 -~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l-~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 487 -MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRL-DLLKDFDKIIVLDNG 561 (591)
T ss_pred -ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecc-hhHhcCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999984 3455566677776 467789999999999
Q ss_pred eEEEEcChhhHHH
Q 046656 374 QIVYQGPCELVLD 386 (1326)
Q Consensus 374 ~iv~~G~~~~~~~ 386 (1326)
++...|+.++++.
T Consensus 562 ~v~e~gth~ell~ 574 (591)
T KOG0057|consen 562 TVKEYGTHSELLA 574 (591)
T ss_pred eeEEeccHHHHhh
Confidence 9999999999875
No 300
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=335.65 Aligned_cols=220 Identities=19% Similarity=0.243 Sum_probs=178.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.++++|+++.+.. +.+.+|+|+|++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5889999887741 124699999999999999999999999999999999997642 24589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCC-HHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVD-SETRKMFIEEIMELVELKPLRQSLVGLPGE 959 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~-~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 959 (1326)
.++.. ...++.++||+|++.++. .|++||+.|+.... ... .+...+.++++++.++|.+-.+..++.. +
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 98742 234667999999988774 79999999864321 122 2222345778899988754333333332 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 47999999999999999999999999999999999999999999999875 799999999986 56677999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 301
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=325.99 Aligned_cols=215 Identities=21% Similarity=0.246 Sum_probs=175.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
-+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887653 246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|++||+.|...... .....+..++++++++.+++.+ ..+..+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKSA-- 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87632 123567999999988887 899999988653321 1123334456788999998753 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||+|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 146 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 146 ---LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999999876 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 789999875
No 302
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.9e-33 Score=359.05 Aligned_cols=122 Identities=23% Similarity=0.296 Sum_probs=102.1
Q ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---cEEEE
Q 046656 910 VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLSTEQRKRLTIAVELVANP---SIIFM 985 (1326)
Q Consensus 910 ~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p---~illL 985 (1326)
+|+.|++.|...+. . .....+.++.++|..+ .++.+ ..||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~------~---i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP------K---IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch------h---hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 68899988865332 1 1124678999999763 45554 369999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe-----cCcEEEEEcCC
Q 046656 986 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1047 (1326)
Q Consensus 986 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~G~~ 1047 (1326)
||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999975 446799999994 57999999985
No 303
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.9e-33 Score=368.38 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=108.5
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCc
Q 046656 906 HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLSTEQRKRLTIAVELV---ANPS 981 (1326)
Q Consensus 906 ~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~---~~p~ 981 (1326)
.+...||.|+|.++..-......+.++..+.+ ++|+.++|.++ .++.+ ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999886542222122233344456 58899999876 56654 369999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe-----cCcEEEEEcCCC
Q 046656 982 IIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPLG 1048 (1326)
Q Consensus 982 illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~G~~~ 1048 (1326)
++||||||+|||+.+...+++.|++++++|.|||+++|++. .+ +.+|++++|. +||+++..|+.+
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8899999995 368999999863
No 304
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=319.08 Aligned_cols=232 Identities=24% Similarity=0.326 Sum_probs=189.2
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC-C-CCceeeEEEECCccCCCCCc-------cceEEEEccC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD-S-SLKVSGRVTYNGHDMNEFVP-------QRTAAYISQH 206 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 206 (1326)
...+++|||+.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 33468999999998654432 2579999999
Q ss_pred --CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 207 --DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 207 --d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
..+-|.+||.+.+.-..+.+.... ...+....+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 567788999988876544321100 0112334567789999998643
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
. +.+.++..|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..+++++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 34578999999999999999999999999999999999999999999999999977 46788888999999999999
Q ss_pred CeEEEecCCeEEEEcChhhHHHHHHhcCCCCCCCCChHHHHHHhcC
Q 046656 365 DDIILLSDGQIVYQGPCELVLDFFESMGFKCPERKSVADFLQEVTS 410 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~~~F~~lG~~~p~~~~~ad~l~~~~s 410 (1326)
|||+||..|+||+.|+.+++ |..|.+.-+...+..+..
T Consensus 222 Dri~VMYaG~iVE~g~~~~i--------~~~P~HPYT~~Ll~s~P~ 259 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEI--------FKNPKHPYTRGLLNSLPR 259 (316)
T ss_pred ceEEEEECcEEEEeCCHHHH--------hcCCCChHHHHHHHhCcc
Confidence 99999999999999999988 355666555555544433
No 305
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.48 Aligned_cols=215 Identities=22% Similarity=0.301 Sum_probs=174.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887663 235999999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+ ..++.+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 144 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKSA-- 144 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcCC--
Confidence 87642 124567899999988777 8999999986533211 122334556888899988753 234433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|++++|+
T Consensus 145 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 145 ---LGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred ---CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999854 899999999976 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 306
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=326.49 Aligned_cols=209 Identities=19% Similarity=0.335 Sum_probs=172.7
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++.+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 13 ~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 89 (241)
T PRK10895 13 YKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASI 89 (241)
T ss_pred eCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcc
Confidence 33457999999999999999999999999999999999999887 9999999988754332 3569999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.+..+.... . .. .+....++.+++.+||++..+
T Consensus 90 ~~~~tv~enl~~~~~~~~~---~------~~------------------------~~~~~~~~~~l~~~~l~~~~~---- 132 (241)
T PRK10895 90 FRRLSVYDNLMAVLQIRDD---L------SA------------------------EQREDRANELMEEFHIEHLRD---- 132 (241)
T ss_pred cccCcHHHHHhhhhhcccc---c------CH------------------------HHHHHHHHHHHHHcCCHHHhh----
Confidence 8889999999875432110 0 00 001123566788899976554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
..++.|||||||||+||++++.+|++++|||||+|||+.++..+.+.++++.. .+.+++.++|+..++.+++|++++
T Consensus 133 -~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~ 209 (241)
T PRK10895 133 -SMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYI 209 (241)
T ss_pred -cchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEE
Confidence 34567999999999999999999999999999999999999999999998754 345666688888899999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+++++.
T Consensus 210 l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 210 VSQGHLIAHGTPTEIL 225 (241)
T ss_pred EeCCeEEeeCCHHHHh
Confidence 9999999999988763
No 307
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=326.26 Aligned_cols=215 Identities=26% Similarity=0.308 Sum_probs=174.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--CC-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 885 (1326)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 477889887763 2469999999999999999999999999999999999742 21 2489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.+... ..+++.++|++|+..+++ .|++||+.+....+. .......++.++++++.+++.+ ..+..+
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDSA-- 146 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcCc--
Confidence 87632 124567999999988777 899999987643321 1122333456788899998753 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 147 ---LGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 308
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.16 Aligned_cols=219 Identities=19% Similarity=0.256 Sum_probs=173.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--CC-eeEEEEEEcCc
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGNITISGY 886 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~ 886 (1326)
-+++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35677776552 2469999999999999999999999999999999999864 11 35899999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046656 887 PKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESG 961 (1326)
Q Consensus 887 ~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 961 (1326)
++.. ...++.++|++|++.+++. |+.||+.+....+. ........++.++++++.+++.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999888775 99999987643321 1112233445678899999986521111111 1246
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++. +|+|||++||++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999986 689
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 988874
No 309
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=327.44 Aligned_cols=215 Identities=20% Similarity=0.265 Sum_probs=175.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC--C-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 885 (1326)
-+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478899987663 24699999999999999999999999999999999997642 1 1489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL----RQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~vg~ 956 (1326)
.++.. ...++.+||++|+..+++. |++||+.|...... ....++..+.++++++.+++.+. .+..+
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~-- 153 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQA-- 153 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCCc--
Confidence 87632 1335679999999888775 99999987643321 11233344567888999998542 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 154 ---~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 154 ---LSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 799999875
No 310
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=326.81 Aligned_cols=216 Identities=22% Similarity=0.294 Sum_probs=177.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC-e--eEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478889887763 246999999999999999999999999999999999986532 2 489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+....++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87632 224557999999988887 899999987654331 1223333456788899998843 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 246999999999999999999999999999999999999999999999865 699999999987 6788899999998
Q ss_pred c----CcEEEEEcCC
Q 046656 1037 R----GGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~----gg~~~~~G~~ 1047 (1326)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999985
No 311
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.3e-34 Score=312.98 Aligned_cols=190 Identities=49% Similarity=0.843 Sum_probs=161.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCC--CCCeeEEEEEEcCc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYISGNITISGY 886 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 886 (1326)
.++++|+++.++... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 578889988774210 001246999999999999999999999999999999999987 5 56899999999
Q ss_pred cCCcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 887 PKKQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 887 ~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
+......++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999998888899999997642100 399999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986557788999999986 6887754
No 312
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=342.31 Aligned_cols=195 Identities=23% Similarity=0.347 Sum_probs=168.9
Q ss_pred ceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------CccceEEEEccCCCCCCCCC
Q 046656 142 DVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------VPQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 142 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 214 (1326)
|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999886431 12467999999999999999
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.|+.+.. ....++++++.+||++..+. .++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~-----~~~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDR-----YPG 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhC-----Ccc
Confidence 999999853200 01124667899999876664 456
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 79999999999999999999999999999999999999999999998653 35667778999999999999999999999
Q ss_pred EEEEcChhhHH
Q 046656 375 IVYQGPCELVL 385 (1326)
Q Consensus 375 iv~~G~~~~~~ 385 (1326)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 313
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.62 Aligned_cols=216 Identities=23% Similarity=0.304 Sum_probs=179.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++.. ..+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47889998876410 12359999999999999999999999999999999999887 4689999999876
Q ss_pred Cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDI-HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~-~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764321 2233444456889999999988777765 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++ ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 34 46999999996 68888
Q ss_pred EcCC
Q 046656 1044 VGPL 1047 (1326)
Q Consensus 1044 ~G~~ 1047 (1326)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 314
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=316.95 Aligned_cols=199 Identities=24% Similarity=0.275 Sum_probs=148.8
Q ss_pred eecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHHHHH
Q 046656 838 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYESLL 917 (1326)
Q Consensus 838 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~ 917 (1326)
|.-=.++|..||+++++||||-||||+.++|+|..++ .+|. ..+ -.++|=||--.-....||++.+.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~~-------~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EED-------LKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Ccc-------ceEeecceeecCCCCCcHHHHHH
Confidence 4444577899999999999999999999999998874 4665 111 13678888765556789999775
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 046656 918 YSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 997 (1326)
Q Consensus 918 f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~ 997 (1326)
-...-+.. + .-+..++++-|+|.++.++.+. +|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~---~----s~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG---S----SYFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc---c----chhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 43221111 1 1234678899999999998874 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcC---CCCChhhHHHHHhhcCcc
Q 046656 998 AIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP---LGSNSSDLISYLQLMPMH 1064 (1326)
Q Consensus 998 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~---~~~~~~~~~~~f~~~~~~ 1064 (1326)
..+-+.||+..+. ++|.+++-||.-+ +--..||+++.. |+---+|. +..+-+.+-.|.++++.+
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~--GePg~~g~a~~P~~mr~GMN~FLk~l~vT 559 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE--GEPGKHGHASPPMSMREGMNRFLKNLGVT 559 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe--cCCCccCcCCCCccHHHHHHHHHHHcCcE
Confidence 9999999998754 8899999999753 444579999886 33333331 112333455566655544
No 315
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.2e-34 Score=322.46 Aligned_cols=201 Identities=25% Similarity=0.314 Sum_probs=166.8
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC--eeEEEEEEcCccCCcccc-cceEEEeecCCC--CCCCCC
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YISGNITISGYPKKQETF-TRISGYCEQNDI--HSPLVT 911 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~~T 911 (1326)
+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999987631 158999999988654322 357899999974 556789
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK---PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 988 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~---~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 988 (1326)
+.|++.+...... ......++.++++++.+++. +..+..+ ..||||||||++|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233345689999999997 3455554 35999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 989 TSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 989 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 67778999999985 799988874
No 316
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=326.59 Aligned_cols=203 Identities=24% Similarity=0.356 Sum_probs=169.0
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 214 (1326)
+.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+|
T Consensus 12 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~t 86 (255)
T PRK11248 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRN 86 (255)
T ss_pred CCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCc
Confidence 3456999999999999999999999999999999999999887 99999999887542 345899999988888899
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+||+.++....+.. . .+....++++++.+||++..+. .+.
T Consensus 87 v~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~ 127 (255)
T PRK11248 87 VQDNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKR-----YIW 127 (255)
T ss_pred HHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhC-----Chh
Confidence 999998864322110 0 0011235677899999876554 455
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec--C
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--D 372 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~ 372 (1326)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.++||+|++|+ +
T Consensus 128 ~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~ 206 (255)
T PRK11248 128 QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGP 206 (255)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 79999999999999999999999999999999999999999999987543 35566778899999999999999998 5
Q ss_pred CeEEEEcChh
Q 046656 373 GQIVYQGPCE 382 (1326)
Q Consensus 373 G~iv~~G~~~ 382 (1326)
|+++..++.+
T Consensus 207 G~i~~~~~~~ 216 (255)
T PRK11248 207 GRVVERLPLN 216 (255)
T ss_pred cEEEEEecCC
Confidence 9999988754
No 317
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.4e-34 Score=325.73 Aligned_cols=215 Identities=24% Similarity=0.262 Sum_probs=175.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc-
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP- 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 887 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478889887763 2469999999999999999999999999999999999876 458999999987
Q ss_pred ----CCcc---c----ccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 046656 888 ----KKQE---T----FTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSL 953 (1326)
Q Consensus 888 ----~~~~---~----~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 953 (1326)
+... . .++.++|++|+.. +.+.+|+.||+.+...... .....+..+.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999976432111 1122234456789999999963 55555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhcee
Q 046656 954 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDEL 1032 (1326)
Q Consensus 954 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1032 (1326)
+ ..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++||++. .+.+.+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 469999999999999999999999999999999999999999999998764 899999999986 566789999
Q ss_pred eEEecCcEEEEEcCC
Q 046656 1033 FLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1033 ~~l~~gg~~~~~G~~ 1047 (1326)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999875
No 318
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=359.68 Aligned_cols=219 Identities=26% Similarity=0.313 Sum_probs=183.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378889887763 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Cccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhc-cCC---CCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046656 889 KQET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRL-RTE---VDSETRKMFIEEIMELVELKPLRQSLVGLPGES 960 (1326)
Q Consensus 889 ~~~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~-~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 960 (1326)
.... .++.+||++|++.+++.+||+||+.++..... ... .+..+.+++++++++.++|.+..++.++
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~----- 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA----- 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----
Confidence 4321 23468999999988899999999987532110 001 1223344568899999999887777764
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||||||||++|||+|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ .+...+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 59999999999999999999999999999999999999999999999878999999999986 57778999999985 78
Q ss_pred EEEEcCCCC
Q 046656 1041 EIYVGPLGS 1049 (1326)
Q Consensus 1041 ~~~~G~~~~ 1049 (1326)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999998754
No 319
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.90 Aligned_cols=214 Identities=23% Similarity=0.325 Sum_probs=174.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcCc
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISGY 886 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 886 (1326)
++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887653 246999999999999999999999999999999999986521 25899999998
Q ss_pred cCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc----ccccccCC
Q 046656 887 PKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL----RQSLVGLP 957 (1326)
Q Consensus 887 ~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~vg~~ 957 (1326)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 144 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKPG--- 144 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCCh---
Confidence 7642 123567999999988877 899999988643221 11223334557888999988642 33333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
.+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++
T Consensus 145 --~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 145 --TRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred --hhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999865 799999999986 57788999999986
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 221 -G~i~~~g~~ 229 (250)
T PRK14262 221 -GELIEYGPT 229 (250)
T ss_pred -CEEEEecCH
Confidence 688888874
No 320
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=314.02 Aligned_cols=180 Identities=46% Similarity=0.781 Sum_probs=155.8
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC---CCCceeeEEEECCccCCCCC--ccceEEEEccCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD---SSLKVSGRVTYNGHDMNEFV--PQRTAAYISQHDVH 209 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 209 (1326)
.++.+|+|+|+.+++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 35679999999999999999999999999999999999998 55 999999999876432 24679999999999
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.++++.. .
T Consensus 95 ~~~~tv~~~l~~~~~~~--------------------------------------------------------------~ 112 (202)
T cd03233 95 FPTLTVRETLDFALRCK--------------------------------------------------------------G 112 (202)
T ss_pred CCCCcHHHHHhhhhhhc--------------------------------------------------------------c
Confidence 99999999998753210 1
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.++++....+.++++++||+.+++.+++|++++
T Consensus 113 ~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 113 NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 23445799999999999999999999999999999999999999999999986543456777778888899999999999
Q ss_pred ecCCeEEEEc
Q 046656 370 LSDGQIVYQG 379 (1326)
Q Consensus 370 L~~G~iv~~G 379 (1326)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 321
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.6e-33 Score=363.56 Aligned_cols=209 Identities=26% Similarity=0.381 Sum_probs=176.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+|+|+. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 6899999998852 12469999999999999999999999999999999999887 4689999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.+|||+|++.++. .|++||+.++. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~- 612 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG- 612 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC-
Confidence 43 456889999999998875 59999997641 1222 2346778888877653 34556543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|++||+++ ....+|++++|++
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~- 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER- 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 357999999999999999999999999999999999999999999986 4899999999985 4577999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 799999985
No 322
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.93 Aligned_cols=216 Identities=26% Similarity=0.376 Sum_probs=175.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCC-CCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHD-VHIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 212 (1326)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 45899999999999999999999999999999999999987 9999999998765332 35799999986 36778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+||+.++.+..+.. . .+....++++++.+||++..++.
T Consensus 97 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~----- 137 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------R------------------------EEMVERVDQALRQVGMEDFLNRE----- 137 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC-----
Confidence 89999999865432110 0 01122357788999998766654
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+++.|++++.. .+++|++++|+.+++. .||+|++|++
T Consensus 138 ~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 138 PHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998653 3566666788888776 5999999999
Q ss_pred CeEEEEcChhhHHH---HHHhcCCCCC
Q 046656 373 GQIVYQGPCELVLD---FFESMGFKCP 396 (1326)
Q Consensus 373 G~iv~~G~~~~~~~---~F~~lG~~~p 396 (1326)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887753 3444455443
No 323
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-34 Score=322.89 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.3
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVH 209 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 209 (1326)
++++++|+|+|+.+++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (230)
T TIGR03410 10 YGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREI 86 (230)
T ss_pred eCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcc
Confidence 34457999999999999999999999999999999999999987 9999999988754322 3569999999988
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcC-Ccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLG-LDVCADTLV 288 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~v 288 (1326)
++.+||+||+.++....+.. . ....+++++.++ +....+
T Consensus 87 ~~~~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~--- 126 (230)
T TIGR03410 87 FPRLTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLG--- 126 (230)
T ss_pred cCCCcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhh---
Confidence 99999999998865322100 0 001233455554 343333
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
..++.|||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++++. .+++++.++|+.+++.+++|+|+
T Consensus 127 --~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~ 203 (230)
T TIGR03410 127 --RRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYY 203 (230)
T ss_pred --CChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEE
Confidence 445679999999999999999999999999999999999999999999987653 35667778899999999999999
Q ss_pred EecCCeEEEEcChhhH
Q 046656 369 LLSDGQIVYQGPCELV 384 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~ 384 (1326)
+|++|++++.|+.+++
T Consensus 204 ~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 204 VMERGRVVASGAGDEL 219 (230)
T ss_pred EEECCEEEEECCHHHc
Confidence 9999999999998766
No 324
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.5e-34 Score=324.67 Aligned_cols=214 Identities=22% Similarity=0.288 Sum_probs=174.6
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC--eeEEEEEEcC
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YISGNITISG 885 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g 885 (1326)
..++++|+++.++ +.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578899987651 25899999999999999999999999999999999987631 1689999999
Q ss_pred ccCCcccc-cceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 046656 886 YPKKQETF-TRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP---LRQSLVGLPGE 959 (1326)
Q Consensus 886 ~~~~~~~~-~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~vg~~~~ 959 (1326)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... ..+.++++++.+++.+ ..++.+
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~~----- 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLYP----- 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcCC-----
Confidence 87653322 356999999974 4466799999876432211 111 2256889999999976 344443
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999998764 899999999986 56778999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 789998875
No 325
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=323.56 Aligned_cols=216 Identities=24% Similarity=0.285 Sum_probs=174.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCe---eEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 885 (1326)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788887653 2469999999999999999999999999999999999875422 379999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ..+++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.+++.+ ..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 146 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTPA-- 146 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCCc--
Confidence 87642 1345679999999998888999999987543221 1122333455677777777642 334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 147 ---TGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 799999999986 5777899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 689998875
No 326
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.4e-34 Score=318.25 Aligned_cols=192 Identities=27% Similarity=0.352 Sum_probs=160.3
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
+++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 45679999999999999999999999999999999999876 468999999976421 1112234567899
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+||+.+..... ..+....++.++++++.+++.+..++.++ .||||||||++|||+|+.+|++|||||||+||
T Consensus 102 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPVK-----TYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99998765432 12333444568889999999888777664 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 56778999999985 6887754
No 327
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-34 Score=334.72 Aligned_cols=213 Identities=20% Similarity=0.233 Sum_probs=176.1
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccCC--
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQHD-- 207 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 207 (1326)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742248999999998865432 14799999997
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+.+.+||.+++.+.....+.. .+ .+....+.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~---------~~------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGM---------SK------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCC---------CH------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 6789999999998754332100 00 0112235667889999754332
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
-+..++.|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 -~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 -MKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred -hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 24678899999999999999999999999999999999999999999999998653 3567778999999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999999884
No 328
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1e-34 Score=319.64 Aligned_cols=195 Identities=26% Similarity=0.378 Sum_probs=163.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 210 (1326)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 999999998875432 235799999999999
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.+.....+... .+....++++++.+||++..++.
T Consensus 91 ~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 133 (214)
T cd03292 91 PDRNVYENVAFALEVTGVPP----------------------------------REIRKRVPAALELVGLSHKHRAL--- 133 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCC---
Confidence 99999999998654322100 00112346678889998766644
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.++++.+ . ++++++++|+.+++.++||++++|
T Consensus 134 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 134 --PAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred --hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999754 2 556777889888999999999999
Q ss_pred cCCeE
Q 046656 371 SDGQI 375 (1326)
Q Consensus 371 ~~G~i 375 (1326)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 329
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.2e-34 Score=319.24 Aligned_cols=194 Identities=29% Similarity=0.410 Sum_probs=162.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVHI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 210 (1326)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999887 999999999876432 235799999998888
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++....+... ......++++++.+||++..++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~---- 133 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADA---- 133 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhC----
Confidence 89999999998654321100 0011235667889999765554
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.. . +.+++.++|+.+++.++||++++|
T Consensus 134 -~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 134 -FPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred -ChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 3457999999999999999999999999999999999999999999999754 3 456777889999999999999999
Q ss_pred cCCe
Q 046656 371 SDGQ 374 (1326)
Q Consensus 371 ~~G~ 374 (1326)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 330
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-34 Score=316.73 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=172.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+++|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478899987653 2469999999999999999999999999999999999876 4589999999876
Q ss_pred CcccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRK 968 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrq 968 (1326)
.....++.++|++|++.+++.+|++||+.+....+. .. ..+.++++++.++|.+..++.++ .||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLVR-----QLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCChh-----hCCHHHHH
Confidence 543344568999999888888999999987653321 11 22356789999999887777653 59999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 969 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 969 rl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
|++|||+++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999987 6888999999986
No 331
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.03 Aligned_cols=204 Identities=25% Similarity=0.393 Sum_probs=166.6
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVHIG 211 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 211 (1326)
.+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (237)
T PRK11614 17 KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFS 93 (237)
T ss_pred CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCC
Confidence 356999999999999999999999999999999999999987 9999999988765432 356999999988898
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHc-CCcccccccccC
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVL-GLDVCADTLVGD 290 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~ 290 (1326)
.+||+||+.++.... .. .+ ....++.+++.+ ++.+..+.
T Consensus 94 ~~tv~~~l~~~~~~~---~~----~~-----------------------------~~~~~~~~l~~~~~l~~~~~~---- 133 (237)
T PRK11614 94 RMTVEENLAMGGFFA---ER----DQ-----------------------------FQERIKWVYELFPRLHERRIQ---- 133 (237)
T ss_pred CCcHHHHHHHhhhcc---Ch----hH-----------------------------HHHHHHHHHHHHHHHHHHHhC----
Confidence 899999998853211 00 00 001123344555 35443332
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.++||++++|
T Consensus 134 -~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (237)
T PRK11614 134 -RAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVL 210 (237)
T ss_pred -chhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998754 3 456666889989999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 211 ENGHVVLEDTGDALL 225 (237)
T ss_pred eCCEEEeeCCHHHHh
Confidence 999999999988773
No 332
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-34 Score=339.88 Aligned_cols=205 Identities=28% Similarity=0.411 Sum_probs=165.9
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCCCCCCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 214 (1326)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+.. .+++++||+|++.++ ..|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-ccc
Confidence 7999999999999999999999999999999999999987 999999999987765 468999999998766 569
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
+||||.++.... + ..++..-.+. ..+.+.+.-+...||.+|+ ..+
T Consensus 411 ireNi~l~~~~~---s----~e~i~~al~~---------------------------a~l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPDA---S----DEEIIAALDQ---------------------------AGLLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCcC---C----HHHHHHHHHH---------------------------hcHHHhhcCCCcccchhcc-CCC
Confidence 999999964211 0 0011110000 0112222224577899995 577
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
+|||||+|||++|||++.+++++++||||++||.++...|.+.|.++++ + +++++++|.. +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~-ktvl~itHrl-~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--Q-KTVLVITHRL-EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--C-CeEEEEEcCh-HHHhcCCEEEEecCCc
Confidence 9999999999999999999999999999999999999999999999865 3 4455567765 4556689999999999
Q ss_pred EEEEcChhhHH
Q 046656 375 IVYQGPCELVL 385 (1326)
Q Consensus 375 iv~~G~~~~~~ 385 (1326)
++++|.++++.
T Consensus 532 l~~~g~~~~L~ 542 (559)
T COG4988 532 LVEQGTHEELS 542 (559)
T ss_pred eeccCCHHHHh
Confidence 99999999885
No 333
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-34 Score=324.45 Aligned_cols=209 Identities=23% Similarity=0.379 Sum_probs=170.7
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHD 207 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 207 (1326)
+...+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 91 (247)
T TIGR00972 12 GEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKP 91 (247)
T ss_pred CCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCc
Confidence 3446999999999999999999999999999999999999763 12389999999987542 1235799999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc----cc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD----VC 283 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 283 (1326)
.+++ +||+||+.+..+..+... . .+....++.+++.+||. +.
T Consensus 92 ~~~~-~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 137 (247)
T TIGR00972 92 NPFP-MSIYDNIAYGPRLHGIKD---------K------------------------KELDEIVEESLKKAALWDEVKDR 137 (247)
T ss_pred ccCC-CCHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCcchhhH
Confidence 8888 999999998654322100 0 00112356678899997 44
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
.+ ..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.++
T Consensus 138 ~~-----~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~ 209 (247)
T TIGR00972 138 LH-----DSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARI 209 (247)
T ss_pred hh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHh
Confidence 44 34567999999999999999999999999999999999999999999998754 3 5677788999999999
Q ss_pred CCeEEEecCCeEEEEcChhhHH
Q 046656 364 FDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 364 ~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
+|+|++|++|+++++|+++++.
T Consensus 210 ~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 210 SDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988763
No 334
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.8e-35 Score=370.20 Aligned_cols=209 Identities=24% Similarity=0.399 Sum_probs=175.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||++.+. +++++|+|+|++|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 589999986542 1246999999999999999999999999999999999987 4 489999999887
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.++||+|++.++. .|++||+.++. .+.++ +.++++++..++.+. .|+.+|..|
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 54 456788999999998876 59999998852 12332 346777777776543 356677644
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
.+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|++||+++ ..+.+|+|++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999875 5899999999985 5677999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 799999985
No 335
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=326.34 Aligned_cols=195 Identities=21% Similarity=0.289 Sum_probs=165.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHH
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVR 216 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 216 (1326)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 25 ~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~ 99 (257)
T PRK11247 25 RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVI 99 (257)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHH
Confidence 45899999999999999999999999999999999999987 9999999976543 246799999998888889999
Q ss_pred HHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCC
Q 046656 217 ETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGI 296 (1326)
Q Consensus 217 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 296 (1326)
||+.++... . ....++.+++.+||.+..+. .+..|
T Consensus 100 enl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~-----~~~~L 134 (257)
T PRK11247 100 DNVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANE-----WPAAL 134 (257)
T ss_pred HHHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcC-----ChhhC
Confidence 999874210 0 00123567888999866554 45679
Q ss_pred ChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEE
Q 046656 297 SGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIV 376 (1326)
Q Consensus 297 SGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 376 (1326)
||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++... .+.+|++++|+..++.++||+|++|++|+++
T Consensus 135 SgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 213 (257)
T PRK11247 135 SGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIG 213 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987553 3456666889988899999999999999999
Q ss_pred EEcChh
Q 046656 377 YQGPCE 382 (1326)
Q Consensus 377 ~~G~~~ 382 (1326)
++|+.+
T Consensus 214 ~~~~~~ 219 (257)
T PRK11247 214 LDLTVD 219 (257)
T ss_pred eecccc
Confidence 988754
No 336
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.85 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=171.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCC--C---CccceEEEEccCCC-CC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNE--F---VPQRTAAYISQHDV-HI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 210 (1326)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 46999999999999999999999999999999999999987 9999999988741 1 12357999999863 34
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
...||+||+.++....+.. . .+....++++++.+||.+..++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~---- 137 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDK---- 137 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhC----
Confidence 5689999998864322110 0 0111235678899999876654
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.++||+|++|
T Consensus 138 -~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 138 -PTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred -CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 45679999999999999999999999999999999999999999999998653 2556777899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 216 ~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 216 KEGRVILQGNPKEVF 230 (283)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998875
No 337
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=323.19 Aligned_cols=215 Identities=23% Similarity=0.268 Sum_probs=174.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888887653 246999999999999999999999999999999999986532 3589999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 046656 886 YPKKQ----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGLP 957 (1326)
Q Consensus 886 ~~~~~----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~~ 957 (1326)
.++.. ...++.++|++|++.+++ .|+.||+.+...... ........+.+.++++.+++.+ ..+..+
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--- 143 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSHA--- 143 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcCc---
Confidence 87631 234567999999988887 899999987643221 1112333456778888888753 233332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||++. ++.+.+|++++|++
T Consensus 144 --~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 144 --FGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999875 689999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 799998874
No 338
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=299.26 Aligned_cols=230 Identities=23% Similarity=0.371 Sum_probs=192.8
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++.+||++++ +.+.+|+++|+.|++|.+++|+|||||||||||.+++++.+ ..+|+|.++|.++.
T Consensus 2 I~i~nv~K~y-------------~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~ 66 (252)
T COG4604 2 ITIENVSKSY-------------GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELT 66 (252)
T ss_pred eeehhhhHhh-------------CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecc
Confidence 3456776655 45789999999999999999999999999999999999876 46999999999874
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
. ..+++.++..-|+......+||+|-+.|+..-.....+. .+.+..++++++.++|.++.|+... +|||||
T Consensus 67 ~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt-~eD~~~I~~aieyl~L~~l~dryLd-----~LSGGQ 140 (252)
T COG4604 67 STPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPYSQGRLT-KEDRRIINEAIEYLHLEDLSDRYLD-----ELSGGQ 140 (252)
T ss_pred cCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcccCCCCc-hHHHHHHHHHHHHhcccchHHHhHH-----hcccch
Confidence 3 346677888999988888999999999975433333333 3445679999999999999999874 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||.-||+.++++.+.++||||.++||-..+..+|+.|++++++ |+||+++.||.+. .-.+.|+|+-|++ |+++..|
T Consensus 141 rQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G 218 (252)
T COG4604 141 RQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQG 218 (252)
T ss_pred hhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecC
Confidence 99999999999999999999999999999999999999999876 9999999999874 4456799999996 7999999
Q ss_pred CCCC-ChhhHHHHHhhcC
Q 046656 1046 PLGS-NSSDLISYLQLMP 1062 (1326)
Q Consensus 1046 ~~~~-~~~~~~~~f~~~~ 1062 (1326)
++++ ...+.++-.++++
T Consensus 219 ~~~eii~~~~L~eiydm~ 236 (252)
T COG4604 219 SPDEIIQPEILSEIYDMD 236 (252)
T ss_pred CHHHhcCHHHHHHHhcCC
Confidence 9865 3345555555443
No 339
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=331.19 Aligned_cols=206 Identities=19% Similarity=0.290 Sum_probs=170.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-------ccceEEEEccCC-C
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-------PQRTAAYISQHD-V 208 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 208 (1326)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 999999999875321 245799999985 2
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-cccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 287 (1326)
.+...||+||+.|+....+.. . .+....++++++.+||+ ...+
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-- 140 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMS-- 140 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh--
Confidence 333469999999865332110 0 01112356778999996 4555
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++... .+++|++++|+.+++.+++|+|
T Consensus 141 ---~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 141 ---QSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred ---CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 345679999999999999999999999999999999999999999999998643 4567777899999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999988764
No 340
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=324.40 Aligned_cols=221 Identities=22% Similarity=0.275 Sum_probs=177.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ...+|+|+||++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478899988763 235999999999999999999999999999999999987632 2479999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGES 960 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 960 (1326)
.++.. ...++.++|++|+..+++ .|+.||+.+....... .+..+..+.+.++++.+++.+..+...+. ...
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988887 8999999876432210 12233345678899999985422111111 124
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecC-
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1038 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g- 1038 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 6999999999999999999999999999999999999999999999865 4899999999986 678899999999964
Q ss_pred ---cEEEEEcCC
Q 046656 1039 ---GQEIYVGPL 1047 (1326)
Q Consensus 1039 ---g~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 799999986
No 341
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.8e-33 Score=362.61 Aligned_cols=210 Identities=26% Similarity=0.390 Sum_probs=176.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+|+|+. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 6899999998841 2359999999999999999999999999999999999887 4689999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.+|||+|++.+++. |++||+.++. ..+.++ +.++++++..++.+. .|+.+|..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~----~~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGA----KENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccC----CCCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 43 4567889999999988764 9999998752 112222 346777777777543 35566653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|++||+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999985 4899999999985 5678999999986
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999985
No 342
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.57 Aligned_cols=205 Identities=23% Similarity=0.330 Sum_probs=169.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-------ccceEEEEccCCC-
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-------PQRTAAYISQHDV- 208 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 208 (1326)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999997 999999998875321 1356999999852
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-cccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 287 (1326)
.+..+||+||+.|+....+.. . .+....++++++.+||+ ...++
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~- 141 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLISK- 141 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhC-
Confidence 344689999999865322110 0 01112356788999996 44454
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|
T Consensus 142 ----~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 142 ----SPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4557999999999999999999999999999999999999999999998753 3667777899999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 343
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=325.34 Aligned_cols=215 Identities=23% Similarity=0.266 Sum_probs=176.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.+... ..+++.++|++|+..+++. |++||+.+...... .......++.++++++.+++.+ ..+..+
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 166 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHENA-- 166 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCCc--
Confidence 87642 1345679999999888875 99999987643321 1112233456888999998863 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|+
T Consensus 167 ---~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 167 ---FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred ---ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999875 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 242 ~-G~i~~~g~~ 251 (272)
T PRK14236 242 M-GKLVEYGDT 251 (272)
T ss_pred C-CEEEecCCH
Confidence 6 799998875
No 344
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.9e-34 Score=325.39 Aligned_cols=208 Identities=22% Similarity=0.309 Sum_probs=172.8
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC----------------ccc
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV----------------PQR 198 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~ 198 (1326)
+.+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (252)
T TIGR03005 11 GILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRN 87 (252)
T ss_pred CCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhh
Confidence 3456999999999999999999999999999999999999987 999999998775321 145
Q ss_pred eEEEEccCCCCCCCCCHHHHHHhhhhh-ccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 046656 199 TAAYISQHDVHIGEMTVRETLAFSARC-QGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKV 277 (1326)
Q Consensus 199 ~~~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (1326)
.++|++|++.+++..||+||+.++... .+.. . .+....++.+++.
T Consensus 88 ~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~ 133 (252)
T TIGR03005 88 KIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R------------------------AEAEKRAMELLDM 133 (252)
T ss_pred CeEEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHH
Confidence 799999999889999999999875321 1100 0 0011234567889
Q ss_pred cCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCh
Q 046656 278 LGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPA 357 (1326)
Q Consensus 278 lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~ 357 (1326)
+|+++..+. .+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++++.++|+.
T Consensus 134 ~gl~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~ 207 (252)
T TIGR03005 134 VGLADKADH-----MPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEM 207 (252)
T ss_pred cCChhHhhc-----ChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCH
Confidence 999766553 45679999999999999999999999999999999999999999999987653 356777788999
Q ss_pred hhHHhhCCeEEEecCCeEEEEcChhhHH
Q 046656 358 PETYDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 358 ~~~~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
+++.+++|++++|++|++++.|+.+++.
T Consensus 208 ~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 208 GFAREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999987763
No 345
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.4e-34 Score=319.78 Aligned_cols=205 Identities=25% Similarity=0.306 Sum_probs=168.6
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--CccceEEEEc-cCCC
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--VPQRTAAYIS-QHDV 208 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~ 208 (1326)
++++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~ 105 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQ 105 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccc
Confidence 4455678999999999999999999999999999999999999987 99999999875332 1235799998 5567
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++.+||+|++.+.....+... ++....++.+++.+||++..|+.+
T Consensus 106 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~ 151 (236)
T cd03267 106 LWWDLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPV 151 (236)
T ss_pred cCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCCh
Confidence 7789999999988654322100 001123456788899988777654
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. ++.+|+.++|+.+++.+++|+++
T Consensus 152 -----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~ 225 (236)
T cd03267 152 -----RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVL 225 (236)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998653 34566668888888999999999
Q ss_pred EecCCeEEEEc
Q 046656 369 LLSDGQIVYQG 379 (1326)
Q Consensus 369 lL~~G~iv~~G 379 (1326)
+|++|++++.|
T Consensus 226 ~l~~G~i~~~g 236 (236)
T cd03267 226 VIDKGRLLYDG 236 (236)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 346
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-34 Score=322.56 Aligned_cols=213 Identities=23% Similarity=0.333 Sum_probs=172.6
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVHI 210 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 210 (1326)
+.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 13 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (242)
T TIGR03411 13 DGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVF 89 (242)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccC
Confidence 3456999999999999999999999999999999999999887 9999999988754322 24699999999999
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++..... ..+....... ..+....++++++.+|+++..+..
T Consensus 90 ~~~tv~~nl~~~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~--- 140 (242)
T TIGR03411 90 ENLTVFENLELALPRDK--SVFASLFFRL------------------------SAEEKDRIEEVLETIGLADEADRL--- 140 (242)
T ss_pred CCCCHHHHHHHhhhccc--cccccccccc------------------------HHHHHHHHHHHHHHcCCchhhcCC---
Confidence 99999999998643110 0000000000 001122356788999998766644
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
++.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+.+++.++||+|++|
T Consensus 141 --~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 215 (242)
T TIGR03411 141 --AGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVL 215 (242)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999753 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 046656 371 SDGQIVYQGPCELV 384 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~ 384 (1326)
++|+++++|+.+++
T Consensus 216 ~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 216 HQGSVLAEGSLDQV 229 (242)
T ss_pred ECCeEEeeCCHHHH
Confidence 99999999998776
No 347
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.9e-34 Score=317.22 Aligned_cols=211 Identities=22% Similarity=0.337 Sum_probs=175.0
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++.. .+.+.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5677887765310 112579999999999999999999999999999999999876 46899999998763
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 890 QE------TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
.. ..++.++|++|++.+++..|+.||+.+...... .....+..+.+.++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 235679999999988888999999998654321 1234444567899999999987777665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999975 4578999999986 453
No 348
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=328.41 Aligned_cols=218 Identities=24% Similarity=0.405 Sum_probs=175.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578889887763 12469999999999999999999999999999999999876 4689999999876
Q ss_pred CcccccceEEEeecCCCCC--CCCCHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 046656 889 KQETFTRISGYCEQNDIHS--PLVTVYESLLYSAWLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTE 965 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~--~~~Tv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgG 965 (1326)
.....++.++|++|++.+. ...+++|++.+...... .........++.++++++.++|.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234689999997653 23478888865321000 0011112234457889999999887777664 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 966 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 966 qrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999776 4 7999999
Q ss_pred CCC
Q 046656 1046 PLG 1048 (1326)
Q Consensus 1046 ~~~ 1048 (1326)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 349
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=333.78 Aligned_cols=213 Identities=20% Similarity=0.233 Sum_probs=173.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC-ceeeEEEECCccCCCCCc-------cceEEEEccCC-
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL-KVSGRVTYNGHDMNEFVP-------QRTAAYISQHD- 207 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 207 (1326)
.++|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 138999999998765432 13699999987
Q ss_pred -CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 208 -VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 208 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
.+.|.+||.+++.......... . ..+....++++++.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------~------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------N------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------C------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 4788999999987654321000 0 0111234567899999975321
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
+-+..++.|||||||||+||+||+.+|++|++||||+|||+.++.++++.|+++... .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 123567789999999999999999999999999999999999999999999998653 356777799999999999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 350
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.3e-34 Score=338.89 Aligned_cols=206 Identities=23% Similarity=0.390 Sum_probs=172.4
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------CccceEEEEcc
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------VPQRTAAYISQ 205 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q 205 (1326)
+++++. + |+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|
T Consensus 8 ~~~~~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q 82 (354)
T TIGR02142 8 RLGDFS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQ 82 (354)
T ss_pred EECCEE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEec
Confidence 333344 4 999999999999999999999999999999999987 99999999887432 12467999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
++.+++.+||+||+.|+.+... . . +....++++++.+||++..+
T Consensus 83 ~~~l~~~~tv~enl~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~gL~~~~~ 126 (354)
T TIGR02142 83 EARLFPHLSVRGNLRYGMKRAR--P----------S------------------------ERRISFERVIELLGIGHLLG 126 (354)
T ss_pred CCccCCCCcHHHHHHHHhhccC--h----------h------------------------HHHHHHHHHHHHcCChhHhc
Confidence 9999999999999998643210 0 0 01123567789999987666
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
. .+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+.+++..++|
T Consensus 127 ~-----~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d 200 (354)
T TIGR02142 127 R-----LPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLAD 200 (354)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCC
Confidence 4 45579999999999999999999999999999999999999999999998653 35567778999999999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++|++++.|+++++.
T Consensus 201 ~i~~l~~G~i~~~g~~~~~~ 220 (354)
T TIGR02142 201 RVVVLEDGRVAAAGPIAEVW 220 (354)
T ss_pred EEEEEeCCEEEEECCHHHHh
Confidence 99999999999999988774
No 351
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=326.76 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=174.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--C-CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 885 (1326)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899987763 2459999999999999999999999999999999999743 1 02589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..+..+
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 180 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKNA-- 180 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCCh--
Confidence 87532 1245679999999888774 999999986433211 12223345677888888874 2334333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 181 ---~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 181 ---LGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 689999999986 5677899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 352
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=325.13 Aligned_cols=209 Identities=33% Similarity=0.484 Sum_probs=172.2
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHI 210 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 210 (1326)
++.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (258)
T PRK13548 12 LGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLS 88 (258)
T ss_pred eCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCC
Confidence 33456999999999999999999999999999999999999887 9999999987654322 35689999998887
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++....+. . . .+....++.+++.+||++..++.
T Consensus 89 ~~~tv~e~l~~~~~~~~~-~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 131 (258)
T PRK13548 89 FPFTVEEVVAMGRAPHGL-S---------R------------------------AEDDALVAAALAQVDLAHLAGRD--- 131 (258)
T ss_pred CCCCHHHHHHhhhcccCC-C---------c------------------------HHHHHHHHHHHHHcCCHhHhcCC---
Confidence 889999999885432110 0 0 00112346678899998766654
Q ss_pred ccccCCChhhhHHHHHHHHhh------cCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 291 EMVRGISGGQKKRLTTGEMMV------GPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~------~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+..|||||||||+||++|+ .+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+..++.++|
T Consensus 132 --~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~ 208 (258)
T PRK13548 132 --YPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYA 208 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhc
Confidence 4579999999999999999 5999999999999999999999999999986333 456777889998999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|+|++|++|++++.|+++++.
T Consensus 209 d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 209 DRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred CEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999987764
No 353
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.4e-34 Score=320.07 Aligned_cols=201 Identities=25% Similarity=0.337 Sum_probs=162.9
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCC--CC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHD--VH 209 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 209 (1326)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999876533 235799999997 45
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-ccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTLV 288 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 288 (1326)
++.+||+||+.+.....+.... + .......+.+++.+||. ...+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~----------~----------------------~~~~~~~~~~l~~~~l~~~~~~--- 140 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK----------K----------------------EARKEAVLLLLVGVGLPEEVLN--- 140 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH----------H----------------------HHHHHHHHHHHHHCCCChhHhh---
Confidence 6789999999886543211000 0 00011124567888884 3444
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+.+|+.++|+.+++.++||+|+
T Consensus 141 --~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 141 --RYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred --CCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEE
Confidence 345679999999999999999999999999999999999999999999998653 24566668888889999999999
Q ss_pred EecCCeEEEEc
Q 046656 369 LLSDGQIVYQG 379 (1326)
Q Consensus 369 lL~~G~iv~~G 379 (1326)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 354
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=328.06 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=169.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCC-CCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDV-HIG 211 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 211 (1326)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 45999999999999999999999999999999999999987 9999999998754321 357999999864 467
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
..||+||+.|+....+.. + .+....++++++.+||++..++.
T Consensus 92 ~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~---- 133 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------P------------------------IEIRKRVDRALAEIGLEKYRHRS---- 133 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCC----
Confidence 789999999865432110 0 01112356678899998766654
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
+..|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.. .+++|++++|+..++ ..+|+|++|+
T Consensus 134 -~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 134 -PKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999998754 356677788888887 5699999999
Q ss_pred CCeEEEEcChhhHH
Q 046656 372 DGQIVYQGPCELVL 385 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~ 385 (1326)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 355
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=325.79 Aligned_cols=215 Identities=21% Similarity=0.264 Sum_probs=174.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--C-CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 885 (1326)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899988763 2469999999999999999999999999999999999642 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++. |++||+.+..... ........++.++++++.+++.+ ..++.+
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 162 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSSA-- 162 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCc--
Confidence 87642 1245679999999888774 9999998764321 11112223455788888888852 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 163 ---~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 163 ---LSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 799998874
No 356
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.2e-34 Score=314.30 Aligned_cols=199 Identities=23% Similarity=0.303 Sum_probs=164.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677776552 3469999999999999999999999999999999999877 45899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 890 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 890 ~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
. ..+++.++|++|++.+++.+|+.||+.+...... . ..++.++++++.+++.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999988888999999988653321 1 12345889999999987777665 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999976 454433566555
No 357
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=325.10 Aligned_cols=208 Identities=24% Similarity=0.318 Sum_probs=171.4
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC----------------Cccc
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF----------------VPQR 198 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~ 198 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (257)
T PRK10619 16 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRT 92 (257)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhh
Confidence 3456999999999999999999999999999999999999887 89999999876421 1135
Q ss_pred eEEEEccCCCCCCCCCHHHHHHhhhh-hccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 046656 199 TAAYISQHDVHIGEMTVRETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKV 277 (1326)
Q Consensus 199 ~~~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (1326)
.++|++|++.+++.+||+||+.++.. ..+.. . .+....++++++.
T Consensus 93 ~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~ 138 (257)
T PRK10619 93 RLTMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------K------------------------QEARERAVKYLAK 138 (257)
T ss_pred ceEEEecCcccCCCCcHHHHHHHHHHHhCCCC----------H------------------------HHHHHHHHHHHHH
Confidence 79999999998999999999987532 11100 0 0011234667899
Q ss_pred cCCcccccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCh
Q 046656 278 LGLDVCADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPA 357 (1326)
Q Consensus 278 lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~ 357 (1326)
+||.+... +..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+.+|+.++|+.
T Consensus 139 ~gl~~~~~----~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~ 212 (257)
T PRK10619 139 VGIDERAQ----GKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEM 212 (257)
T ss_pred cCCChhhh----hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCH
Confidence 99976431 234568999999999999999999999999999999999999999999999854 356667788999
Q ss_pred hhHHhhCCeEEEecCCeEEEEcChhhHH
Q 046656 358 PETYDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 358 ~~~~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
.++.++||+|++|++|++++.|+++++.
T Consensus 213 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 213 GFARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 9999999999999999999999988763
No 358
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5e-33 Score=357.66 Aligned_cols=211 Identities=27% Similarity=0.426 Sum_probs=178.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+|+|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6899999998842 22469999999999999999999999999999999999987 4689999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.++||+|++.++. .|++||+.++. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~- 598 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER- 598 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecCC-
Confidence 54 456788999999998876 59999998742 1222 2346777787777543 35556653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|++||+++ ..+.+|+|++|++
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 35799999999999999999999999999999999999999999999876 4899999999986 4678999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 799999985
No 359
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.8e-34 Score=354.60 Aligned_cols=221 Identities=21% Similarity=0.325 Sum_probs=181.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 46778877653 34699999999999999999999999999999999998764235899999998764
Q ss_pred ccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 046656 890 QET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRT-EVDSETRKMFIEEIMELVELKPLR-QSLVGLPGESGLS 963 (1326)
Q Consensus 890 ~~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~vg~~~~~~LS 963 (1326)
... .++.+||++|++.+++.+||.|++.+....+... ....+..+++++++++.+++.+.. +..+ ..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 321 2356899999998889999999998864322111 122333445688999999997654 4444 3599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||||+|||+|+.+|++|||||||+|||+.+...+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57778999999986 68899
Q ss_pred EcCCCCC
Q 046656 1044 VGPLGSN 1050 (1326)
Q Consensus 1044 ~G~~~~~ 1050 (1326)
.|+..+.
T Consensus 222 ~~~~~~~ 228 (500)
T TIGR02633 222 TKDMSTM 228 (500)
T ss_pred ecCcccC
Confidence 8887543
No 360
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=325.20 Aligned_cols=207 Identities=20% Similarity=0.285 Sum_probs=166.0
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 458999999999999999999999999999999999998631 1389999999876421 124579999999877
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc----cccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD----VCAD 285 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 285 (1326)
+ .+||+||+.|+....+.... .+....++.+++.+|+. +..+
T Consensus 100 ~-~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 145 (254)
T PRK14273 100 F-LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLN 145 (254)
T ss_pred c-cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHh
Confidence 7 48999999986543211000 00112245567777763 2233
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|
T Consensus 146 -----~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~sH~~~~~~~~~d 217 (254)
T PRK14273 146 -----TNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIIIVTHNMQQAGRISD 217 (254)
T ss_pred -----CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCC
Confidence 34567999999999999999999999999999999999999999999999842 3566778899989999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++|+++.+|+++++.
T Consensus 218 ~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 218 RTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988774
No 361
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=322.26 Aligned_cols=215 Identities=25% Similarity=0.278 Sum_probs=175.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478889887663 246999999999999999999999999999999999975421 2489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++. ||+||+.|....+. .......++.+.++++.+++.+ ..++.+
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 147 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLHDSA-- 147 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhhcCh--
Confidence 87642 2335678999999888874 99999998754331 1122333456788899888753 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||++. ++.+.+|++++|+
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 148 ---LSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999875 689999999986 5677899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 6 789988875
No 362
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.6e-34 Score=318.32 Aligned_cols=200 Identities=25% Similarity=0.329 Sum_probs=168.9
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 213 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~ 85 (223)
T TIGR03740 10 FGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENL 85 (223)
T ss_pred ECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccC
Confidence 33457999999999999999999999999999999999999887 999999998765322 35799999998888899
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
||+||+.+.....+.. ...++.+++.+||++..|. .+
T Consensus 86 t~~~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~-----~~ 122 (223)
T TIGR03740 86 TARENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKK-----KA 122 (223)
T ss_pred CHHHHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhh-----hH
Confidence 9999998764322100 0123556888999876654 34
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
..||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+.+|+|++|++|
T Consensus 123 ~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g 200 (223)
T TIGR03740 123 KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEG 200 (223)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999999754 2 456666888888899999999999999
Q ss_pred eEEEEcChh
Q 046656 374 QIVYQGPCE 382 (1326)
Q Consensus 374 ~iv~~G~~~ 382 (1326)
++++.|++.
T Consensus 201 ~i~~~~~~~ 209 (223)
T TIGR03740 201 VLGYQGKIN 209 (223)
T ss_pred EEEEecChh
Confidence 999999864
No 363
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.4e-34 Score=318.48 Aligned_cols=197 Identities=23% Similarity=0.318 Sum_probs=164.5
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHDVH 209 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 209 (1326)
.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~ 90 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHL 90 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccc
Confidence 356999999999999999999999999999999999999887 999999998875432 13579999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.+.....+... ++....++.+++.+||.+..+.
T Consensus 91 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~--- 133 (222)
T PRK10908 91 LMDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKN--- 133 (222)
T ss_pred cccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhC---
Confidence 889999999998654322100 0011124567888998765554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.+..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .++++++++|+.+++...+|+|++
T Consensus 134 --~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~ 209 (222)
T PRK10908 134 --FPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLT 209 (222)
T ss_pred --CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEE
Confidence 4567999999999999999999999999999999999999999999998754 256677789999999999999999
Q ss_pred ecCCeEE
Q 046656 370 LSDGQIV 376 (1326)
Q Consensus 370 L~~G~iv 376 (1326)
|++|+++
T Consensus 210 l~~G~i~ 216 (222)
T PRK10908 210 LSDGHLH 216 (222)
T ss_pred EECCEEc
Confidence 9999985
No 364
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=324.62 Aligned_cols=210 Identities=20% Similarity=0.283 Sum_probs=167.3
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 103 (258)
T PRK14268 24 EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPN 103 (258)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCc
Confidence 3569999999999999999999999999999999999987410 1389999999886432 12356999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ +||+||+.|+.+..+.. .. +....++++++.+|+.......
T Consensus 104 ~~~-~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~- 147 (258)
T PRK14268 104 PFP-MSIYDNVAYGPRIHGAN----------KK------------------------DLDGVVENALRSAALWDETSDR- 147 (258)
T ss_pred cCc-ccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCCcchhhh-
Confidence 777 89999999865432210 00 0112245678888874211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+.+++.++||+|+
T Consensus 148 ~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~i~ 224 (258)
T PRK14268 148 LKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDYTG 224 (258)
T ss_pred hcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCEEE
Confidence 1244567999999999999999999999999999999999999999999998742 4667778899999999999999
Q ss_pred EecCCeEEEEcChhhH
Q 046656 369 LLSDGQIVYQGPCELV 384 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~ 384 (1326)
+|++|++++.|+++++
T Consensus 225 ~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 225 FFLMGELIEFGQTRQI 240 (258)
T ss_pred EEECCEEEEeCCHHHH
Confidence 9999999999998876
No 365
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.5e-34 Score=324.59 Aligned_cols=224 Identities=26% Similarity=0.337 Sum_probs=179.0
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++... ..+. ..++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888887763100 0000 013569999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046656 890 QE------TFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~~------~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 960 (1326)
.. ..++.++|++|+. .+.+..|+.|++.+..... ......+....++++++.+++. ...+..+ .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 31 2356799999997 3567789999987643211 1223344455689999999996 4566554 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
.||+|||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999986 57778999999985 7
Q ss_pred EEEEEcCCC
Q 046656 1040 QEIYVGPLG 1048 (1326)
Q Consensus 1040 ~~~~~G~~~ 1048 (1326)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 366
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=326.35 Aligned_cols=207 Identities=26% Similarity=0.340 Sum_probs=169.8
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCC--C---CccceEEEEccCCC-
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNE--F---VPQRTAAYISQHDV- 208 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~- 208 (1326)
+.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 12 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 88 (271)
T PRK13638 12 QDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQ 88 (271)
T ss_pred CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhh
Confidence 3456999999999999999999999999999999999999987 9999999988742 1 11356999999864
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
.+...|+.||+.+.....+... .+....++.+++.+||++..++
T Consensus 89 ~~~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~-- 132 (271)
T PRK13638 89 QIFYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQ-- 132 (271)
T ss_pred ccccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcC--
Confidence 3456789999988643221100 0011234667888999876654
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
.+..||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+++
T Consensus 133 ---~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~ 207 (271)
T PRK13638 133 ---PIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVY 207 (271)
T ss_pred ---CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEE
Confidence 3457999999999999999999999999999999999999999999999764 3 4567778899999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++++.|+++++.
T Consensus 208 ~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 208 VLRQGQILTHGAPGEVF 224 (271)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 367
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=323.11 Aligned_cols=211 Identities=22% Similarity=0.315 Sum_probs=166.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
+.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 98 (253)
T PRK14242 19 FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNP 98 (253)
T ss_pred eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCC
Confidence 469999999999999999999999999999999999864 1001289999999887531 113579999999887
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++ .||+||+.++....+...+ .+....++.+++.+||.+......
T Consensus 99 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14242 99 FP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL- 143 (253)
T ss_pred Cc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 77 5999999986543221000 001122455677788754221111
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~tH~~~~~~~~~d~v~~ 220 (253)
T PRK14242 144 HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA---RYTIIIVTHNMQQAARVSDVTAF 220 (253)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCeEEEEEecHHHHHHhCCEEEE
Confidence 345678999999999999999999999999999999999999999999998732 35667788999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|+++..|+++++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 221 FYMGKLIEVGPTEQIF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 368
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=321.60 Aligned_cols=215 Identities=25% Similarity=0.327 Sum_probs=174.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC--C-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 885 (1326)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 477889887763 24699999999999999999999999999999999998642 1 3589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.. ..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 145 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRNA-- 145 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccCh--
Confidence 87532 124567999999988776 799999987543221 1122233456788999999852 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 146 ---~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 146 ---QAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999999854 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 369
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=323.14 Aligned_cols=214 Identities=23% Similarity=0.290 Sum_probs=171.0
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCCC---ccceEEEEccCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEFV---PQRTAAYISQHDVHI 210 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 210 (1326)
++++|+|+|+.+++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~ 94 (250)
T PRK14247 15 QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPI 94 (250)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccC
Confidence 456999999999999999999999999999999999998741 113899999998875432 235799999998888
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++.+..+.... . .+....++++++.+||.+..+.. -+
T Consensus 95 ~~~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14247 95 PNLSIFENVALGLKLNRLVKS--------K------------------------KELQERVRWALEKAQLWDEVKDR-LD 141 (250)
T ss_pred CCCcHHHHHHHHHHhccccCC--------H------------------------HHHHHHHHHHHHHcCCCcchhhh-hc
Confidence 999999999986543211000 0 00112346678888986421111 13
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. +++++.++|+..++.+++|+|++|
T Consensus 142 ~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14247 142 APAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFL 218 (250)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEE
Confidence 45668999999999999999999999999999999999999999999998742 456777889988899999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 219 YKGQIVEWGPTREVF 233 (250)
T ss_pred ECCeEEEECCHHHHH
Confidence 999999999988763
No 370
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=331.69 Aligned_cols=207 Identities=18% Similarity=0.206 Sum_probs=174.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC------ccceEEEEccCC--C
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV------PQRTAAYISQHD--V 208 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 208 (1326)
..+|+|||+.|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999886 899999999876542 235799999996 5
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc-ccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV-CADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 287 (1326)
+.+.+||.+++.+..+..... .+ .+....++++++.+||+. ..+
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~---------~~------------------------~~~~~~~~~~l~~~gL~~~~~~-- 149 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSL---------SA------------------------AERREKALAMMAKVGLRPEHYD-- 149 (327)
T ss_pred cCCccCHHHHHHHHHHHccCC---------CH------------------------HHHHHHHHHHHHHCCCChHHhc--
Confidence 788999999998754432100 00 011234577899999963 344
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
..++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 150 ---~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 150 ---RYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ---CCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 456789999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998884
No 371
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=321.36 Aligned_cols=215 Identities=20% Similarity=0.249 Sum_probs=173.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 467888887653 245999999999999999999999999999999999987632 2369999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 144 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHKS--- 144 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhCC---
Confidence 87532 1345679999999988875 999999986543211 112223345777888888753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14249 145 --GLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe
Confidence 34699999999999999999999999999999999999999999999985 5899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14249 221 T-GDLVEYGRT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 788998875
No 372
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6e-35 Score=367.27 Aligned_cols=211 Identities=29% Similarity=0.432 Sum_probs=178.0
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
..++|+||+|.++. ++++|+|+|++++|||++||+||||||||||++.|.|... +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 35999999999852 3569999999999999999999999999999999999887 468999999988
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 046656 888 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-------PLRQSLVGLP 957 (1326)
Q Consensus 888 ~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~vg~~ 957 (1326)
+++ ..+++.++||+|+..++. -|++||+.++. .+.++ +.++++++..++. +-.|+.+|.
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge- 461 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATD----EEIEEALKLANAHEFIANLPDGYDTIVGE- 461 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCH----HHHHHHHHHhChHHHHHhCcccccceecC-
Confidence 754 457788999999998887 79999999863 12232 2355555555443 346788874
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
++.+||||||||++||||++++|+||+||||||+||+.+...|++.++++. +|+|+|+++|+++ ..+.+|+|++|++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999877 5789999999986 3455999999996
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 689999986
No 373
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2e-34 Score=313.65 Aligned_cols=184 Identities=26% Similarity=0.329 Sum_probs=159.8
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ--ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++..|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 469999999999999999999999999999999999876 458999999987532 2345679999999888888999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
+||+.+.... . .+++++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999874311 0 1345789999999988777665 369999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
|+.++..+++.|+++.++|+|+|++||++. ++...+|+++.+
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998777999999999986 677788998877
No 374
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=324.47 Aligned_cols=223 Identities=21% Similarity=0.272 Sum_probs=173.9
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc----cceEEEEccCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQHDVHI 210 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 210 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (255)
T PRK11300 16 GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLF 92 (255)
T ss_pred CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccC
Confidence 3456999999999999999999999999999999999999987 9999999988754321 23589999999999
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++....... +........ ....+ ...+....++.+++.+||+...+.
T Consensus 93 ~~~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~-------------~~~~~~~~~~~~l~~~gl~~~~~~---- 149 (255)
T PRK11300 93 REMTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRR-------------AESEALDRAATWLERVGLLEHANR---- 149 (255)
T ss_pred CCCcHHHHHHHhhhccccc---hhhhhhccc---ccccc-------------chhHHHHHHHHHHHhCChhhhhhC----
Confidence 9999999999864311000 000000000 00000 000112335677889999765554
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||++++|
T Consensus 150 -~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l 227 (255)
T PRK11300 150 -QAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVV 227 (255)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 45579999999999999999999999999999999999999999999987653 3566777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 228 ~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 228 NQGTPLANGTPEEIR 242 (255)
T ss_pred ECCeEEecCCHHHHh
Confidence 999999999988763
No 375
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.8e-34 Score=318.22 Aligned_cols=210 Identities=23% Similarity=0.366 Sum_probs=170.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899987763 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~LSg 964 (1326)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...++.+ ..||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 42 124567899999988776 4999999875433211 11 124578899999995 4556554 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998754 899999999986 34 56999999964444454
Q ss_pred EcC
Q 046656 1044 VGP 1046 (1326)
Q Consensus 1044 ~G~ 1046 (1326)
.|.
T Consensus 219 ~~~ 221 (225)
T PRK10247 219 EAR 221 (225)
T ss_pred hhh
Confidence 443
No 376
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.5e-34 Score=317.90 Aligned_cols=203 Identities=34% Similarity=0.538 Sum_probs=163.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC---CCCceeeEEEECCccCCCCCccceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD---SSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 212 (1326)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|.++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3579999999999999999999999999999999999998 66 99999999887543345679999999999999
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHH-HHHHcCCcccccccccCc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDY-YLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 291 (1326)
+||+||+.|+....+..... ... .....+. .++.+++++..+ .
T Consensus 96 ~tv~enl~~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~l~~~~l~~~~~-----~ 139 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS---DAI----------------------------RKKRVEDVLLRDLALTRIGG-----N 139 (226)
T ss_pred CcHHHHHHHHHHhhcccccc---hHH----------------------------HHHHHHHHHHHhhcchhhhc-----c
Confidence 99999999875432211000 000 0011233 677888876554 4
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCh-hhHHhhCCeEEEe
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPA-PETYDLFDDIILL 370 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~vilL 370 (1326)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ .+ .+++.++|.. .++.++||++++|
T Consensus 140 ~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 140 LVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred cccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEE
Confidence 4567999999999999999999999999999999999999999999998754 34 4555566665 6899999999999
Q ss_pred cCCeEEEEc
Q 046656 371 SDGQIVYQG 379 (1326)
Q Consensus 371 ~~G~iv~~G 379 (1326)
++|+++++|
T Consensus 218 ~~G~i~~~g 226 (226)
T cd03234 218 SSGEIVYSG 226 (226)
T ss_pred eCCEEEecC
Confidence 999999875
No 377
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=324.35 Aligned_cols=219 Identities=23% Similarity=0.289 Sum_probs=177.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578899988763 356999999999999999999999999999999999986531 3689999999
Q ss_pred ccCCc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 046656 886 YPKKQ----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESG 961 (1326)
Q Consensus 886 ~~~~~----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 961 (1326)
.++.. ...++.++|++|++.+++ .|++||+.+..... ...+.++..+.+.++++.+++.+..+.... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 134567899999988887 79999998764322 112333444557788999998643211111 11346
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEE
Q 046656 962 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1041 (1326)
Q Consensus 962 LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1041 (1326)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57788999999985 799
Q ss_pred EEEcCC
Q 046656 1042 IYVGPL 1047 (1326)
Q Consensus 1042 ~~~G~~ 1047 (1326)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999875
No 378
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=324.49 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 212 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 45899999999999999999999999999999999999987 999999999875432 2457999999963 5778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.++....+.. . .+....++++++.+||++..++.
T Consensus 99 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 139 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------P------------------------KKMKDIIDDLAKKVGMEDYLDKE----- 139 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhCC-----
Confidence 99999998864321110 0 01112356788999998766654
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
++.||||||||++||+||+.+|++++|||||+|||+.++..+++.|+++... +++++++++|+.+++. .+|+|++|++
T Consensus 140 ~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 140 PQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998653 3356666777777774 7999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987764
No 379
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.5e-34 Score=315.85 Aligned_cols=194 Identities=29% Similarity=0.425 Sum_probs=160.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 212 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 57999999999999999999999999999999999999987 999999998875432 1357999999864 4678
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||+||+.++....+.. . .+....++++++.+||++..+. .
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 131 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E------------------------EEIEERVEEALELVGLEGLRDR-----S 131 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCcHhhhcC-----C
Confidence 99999998864322110 0 0011234667888999765554 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. +++|+.++|+.+++..+||+|++|++
T Consensus 132 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 132 PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 5579999999999999999999999999999999999999999999998652 56677789999999999999999999
Q ss_pred Ce
Q 046656 373 GQ 374 (1326)
Q Consensus 373 G~ 374 (1326)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 380
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=327.17 Aligned_cols=206 Identities=24% Similarity=0.331 Sum_probs=171.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 212 (1326)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+..
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 93 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFS 93 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCccccccc
Confidence 35999999999999999999999999999999999999987 9999999988754221 356899999863 3456
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+||+.++....+... .+....++++++.+||.+..++.
T Consensus 94 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (277)
T PRK13652 94 PTVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRV----- 134 (277)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCC-----
Confidence 899999987654321100 01112356789999998766654
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
++.||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++... .+++|+.++|+.+++.+.||+|++|++
T Consensus 135 ~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 135 PHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998653 356677789999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+++++.
T Consensus 214 G~i~~~g~~~~~~ 226 (277)
T PRK13652 214 GRIVAYGTVEEIF 226 (277)
T ss_pred CeEEEECCHHHHh
Confidence 9999999998874
No 381
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.3e-34 Score=354.93 Aligned_cols=212 Identities=22% Similarity=0.324 Sum_probs=181.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Cccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.... .++.+||++|++.+++.+||+|++.|... . ....++.++++++.++|.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSAG-----SLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCChh-----hCCH
Confidence 4311 12458999999999999999999987531 0 12234568899999999887777764 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||||||+|||+|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 789999
Q ss_pred cCCCC
Q 046656 1045 GPLGS 1049 (1326)
Q Consensus 1045 G~~~~ 1049 (1326)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 98754
No 382
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=321.42 Aligned_cols=219 Identities=18% Similarity=0.217 Sum_probs=176.1
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITIS 884 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 884 (1326)
..+..+++++.+ +++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 356666666554 2357999999999999999999999999999999999987531 258999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 046656 885 GYPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGE 959 (1326)
Q Consensus 885 g~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 959 (1326)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . .....+.++++++.+++.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987632 13456799999998777 5899999988754331 1 122345688999999986432222111 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe---
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK--- 1036 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~--- 1036 (1326)
..||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 4699999999999999999999999999999999999999999999985 4799999999986 5778899999997
Q ss_pred ----cCcEEEEEcCC
Q 046656 1037 ----RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ----~gg~~~~~G~~ 1047 (1326)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999985
No 383
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3e-34 Score=317.62 Aligned_cols=196 Identities=23% Similarity=0.351 Sum_probs=160.8
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 209 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999988754322 1469999999888
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++.+||+||+.+........ .. +....++++++.+||++..+.
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 137 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK------------------------EAKERAYEMLEKVGLEHRINH--- 137 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhC---
Confidence 88999999999864321110 00 011224567889999765554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++. .+|+|++
T Consensus 138 --~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 138 --RPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred --ChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEE
Confidence 445799999999999999999999999999999999999999999999886533 455666788877775 4799999
Q ss_pred ecCCeEE
Q 046656 370 LSDGQIV 376 (1326)
Q Consensus 370 L~~G~iv 376 (1326)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 384
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1e-34 Score=324.86 Aligned_cols=209 Identities=25% Similarity=0.395 Sum_probs=161.6
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ 890 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 890 (1326)
+++|+++.++. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 46777765531 12459999999999999999999999999999999999876 458999999987532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 046656 891 ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRK-----MFIEEIMELV--ELKPLRQSLVGLPGES 960 (1326)
Q Consensus 891 ---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~vg~~~~~ 960 (1326)
..+++.++|++|++.+++ .||.||+.+... ........ ...+++++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987764 699999987421 11111100 0112333333 333333332 24
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 6999999999999999999999999999999999999999999999864 899999999986 44 56999999985 79
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9998874
No 385
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.4e-34 Score=316.47 Aligned_cols=205 Identities=26% Similarity=0.402 Sum_probs=163.0
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCC-
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHI- 210 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~- 210 (1326)
.+++.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+.
T Consensus 7 ~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~ 81 (213)
T cd03235 7 VSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDR 81 (213)
T ss_pred eEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEecccccccc
Confidence 3334457999999999999999999999999999999999999987 9999999987642 346799999987653
Q ss_pred -CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 211 -GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 211 -~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
+.+||+||+.++..... ..+.... .+....++.+++.+||++..++
T Consensus 82 ~~~~tv~e~l~~~~~~~~--~~~~~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~--- 128 (213)
T cd03235 82 DFPISVRDVVLMGLYGHK--GLFRRLS----------------------------KADKAKVDEALERVGLSELADR--- 128 (213)
T ss_pred CCCCcHHHHHHhcccccc--ccccCCC----------------------------HHHHHHHHHHHHHcCCHHHHhC---
Confidence 34899999988543210 0000000 0011235677889999865554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++++.++|+.+++.+++|+|++
T Consensus 129 --~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~ 204 (213)
T cd03235 129 --QIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLL 204 (213)
T ss_pred --CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEE
Confidence 3457999999999999999999999999999999999999999999999865 356677789999999999999999
Q ss_pred ecCCeEEEEc
Q 046656 370 LSDGQIVYQG 379 (1326)
Q Consensus 370 L~~G~iv~~G 379 (1326)
|++| +++.|
T Consensus 205 l~~~-~~~~g 213 (213)
T cd03235 205 LNRT-VVASG 213 (213)
T ss_pred EcCc-EeecC
Confidence 9886 55554
No 386
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-34 Score=319.88 Aligned_cols=215 Identities=24% Similarity=0.316 Sum_probs=172.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--CC-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 885 (1326)
-+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 367888887663 2469999999999999999999999999999999999753 21 2489999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..+
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~-- 146 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHESA-- 146 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcCc--
Confidence 87632 134567999999988887 6999999886433211 112222345677888887642 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 147 ---~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 147 ---LSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 589999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 387
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-34 Score=317.19 Aligned_cols=208 Identities=26% Similarity=0.338 Sum_probs=173.6
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-ccceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-PQRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~l 213 (1326)
+.+++|+|+|+.++||++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+.. .++.++|++|++..++.+
T Consensus 11 ~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (232)
T cd03300 11 GGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHL 87 (232)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCC
Confidence 3457999999999999999999999999999999999999987 899999998876432 246799999999888899
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
|++||+.+.....+... ......++.+++.+||++..++. +
T Consensus 88 t~~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 128 (232)
T cd03300 88 TVFENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRK-----P 128 (232)
T ss_pred cHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----h
Confidence 99999988654321100 00112346778899998766643 4
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
..|||||||||+||++++.+|++++|||||+|||+.++..+.+.++++... .+.+|+.++|...++.+++|++++|++|
T Consensus 129 ~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~~d~i~~l~~G 207 (232)
T cd03300 129 SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTMSDRIAVMNKG 207 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 579999999999999999999999999999999999999999999998653 2456666788888899999999999999
Q ss_pred eEEEEcChhhHH
Q 046656 374 QIVYQGPCELVL 385 (1326)
Q Consensus 374 ~iv~~G~~~~~~ 385 (1326)
++++.|+.+++.
T Consensus 208 ~~~~~~~~~~~~ 219 (232)
T cd03300 208 KIQQIGTPEEIY 219 (232)
T ss_pred EEEecCCHHHHH
Confidence 999999887663
No 388
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=324.84 Aligned_cols=213 Identities=24% Similarity=0.296 Sum_probs=173.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578899987763 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|+..+++. |+.||+.+....+. ... ...+.++++++.+++.+ ..+..+
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~-- 178 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSSG-- 178 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCCc--
Confidence 87532 2345679999999887775 99999987654321 122 23456889999999853 334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceee-EE
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELF-LM 1035 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~-~l 1035 (1326)
..||||||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||++||++. ++.+.+|+++ +|
T Consensus 179 ---~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 179 ---LDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 46999999999999999999999999999999999999999999999976 489999999986 5677899976 45
Q ss_pred ecCcEEEEEcCC
Q 046656 1036 KRGGQEIYVGPL 1047 (1326)
Q Consensus 1036 ~~gg~~~~~G~~ 1047 (1326)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4789988874
No 389
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=301.30 Aligned_cols=216 Identities=22% Similarity=0.334 Sum_probs=191.3
Q ss_pred hhcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCC
Q 046656 128 HILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHD 207 (1326)
Q Consensus 128 ~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d 207 (1326)
..++++.+++++++|+|+.++||+|.+++|||||||||.+++|+|.++|+ +|+|+++|.+++... +.+|||.|.+-
T Consensus 6 e~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEER 81 (300)
T COG4152 6 EGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEER 81 (300)
T ss_pred ecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhh
Confidence 34567778899999999999999999999999999999999999999998 999999999886542 45799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
-+++.+||.|.|.|-|+++|... ++.....+.+|+.+++.....
T Consensus 82 GLy~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~-- 125 (300)
T COG4152 82 GLYPKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKT-- 125 (300)
T ss_pred ccCccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhcccccccc--
Confidence 99999999999999999988632 123344678899999887665
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
+.+..||-|.+|++.+-.+++.+|++++||||+|||||..+..+-+.++++.. .|++|+..+|.+..+.++||++
T Consensus 126 ---~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~l 200 (300)
T COG4152 126 ---KKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRL 200 (300)
T ss_pred ---chHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhh
Confidence 44667999999999999999999999999999999999999999999999854 4777888899999999999999
Q ss_pred EEecCCeEEEEcChhhHHHHH
Q 046656 368 ILLSDGQIVYQGPCELVLDFF 388 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~~~F 388 (1326)
++|++|+.|.+|+.++++..|
T Consensus 201 lmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 201 LMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred heecCCceEEeccHHHHHHhc
Confidence 999999999999999998754
No 390
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=353.19 Aligned_cols=216 Identities=27% Similarity=0.327 Sum_probs=180.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
... .+++.+||++|++.+++.+||.||+.+..........+..+.++.++++++.++|.+..+..++ .|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLK-----YLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchh-----hCCH
Confidence 421 2346799999999888999999999885321111112233445678899999999877666653 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||++. ++...||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 688776
Q ss_pred cC
Q 046656 1045 GP 1046 (1326)
Q Consensus 1045 G~ 1046 (1326)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 391
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-34 Score=325.98 Aligned_cols=211 Identities=20% Similarity=0.296 Sum_probs=173.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++. +...+|+|+|++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678999887741 12359999999999999999999999999999999999875 379999999876
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGL------PGE 959 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~------~~~ 959 (1326)
.. ...++.++|++|++.+++ .|++||+.... ... ++.++++++.++|.+..+...+. .+.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999998887 49999995321 111 23467888999998766554421 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||+|||||++|||||+.+|+||+|||||++||+.+...+++.|++.. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999985 34 45999999985 7
Q ss_pred EEEEEcCCC
Q 046656 1040 QEIYVGPLG 1048 (1326)
Q Consensus 1040 ~~~~~G~~~ 1048 (1326)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 999999863
No 392
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-34 Score=324.07 Aligned_cols=205 Identities=26% Similarity=0.360 Sum_probs=169.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC--C---ccceEEEEccCCC-CC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF--V---PQRTAAYISQHDV-HI 210 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 210 (1326)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... . .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 45999999999999999999999999999999999999987 99999999887421 1 1357999999852 34
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
...||+||+.++....+.. + .+....+.++++.+||++..++.
T Consensus 92 ~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~--- 134 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGLS----------K------------------------EEVEKRVKEALKAVGMEGFENKP--- 134 (275)
T ss_pred ccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCchhhcCC---
Confidence 4679999998753221100 0 00112356678999998766654
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
++.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||++++|
T Consensus 135 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 135 --PHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999864 2 566777899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998874
No 393
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=321.57 Aligned_cols=205 Identities=23% Similarity=0.312 Sum_probs=169.1
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCC------C---CccceEEEEccC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNE------F---VPQRTAAYISQH 206 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~ 206 (1326)
.+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|+
T Consensus 14 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 90 (242)
T PRK11124 14 AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQ 90 (242)
T ss_pred CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecC
Confidence 346999999999999999999999999999999999999887 9999999987631 0 113579999999
Q ss_pred CCCCCCCCHHHHHHhhh-hhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 207 DVHIGEMTVRETLAFSA-RCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
+.+++.+||+||+.+.. ...+.. . .+....++.+++.+||+...+
T Consensus 91 ~~~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~ 136 (242)
T PRK11124 91 YNLWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYAD 136 (242)
T ss_pred ccccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhh
Confidence 98999999999997532 111110 0 001123567788999986665
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
. .+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.++++.. .+++++.++|+..++.+++|
T Consensus 137 ~-----~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d 209 (242)
T PRK11124 137 R-----FPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTAS 209 (242)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcC
Confidence 4 4457999999999999999999999999999999999999999999998753 35667778899889999999
Q ss_pred eEEEecCCeEEEEcChhhH
Q 046656 366 DIILLSDGQIVYQGPCELV 384 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~ 384 (1326)
++++|++|+++++|+++++
T Consensus 210 ~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 210 RVVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEEECCEEEEeCCHHHh
Confidence 9999999999999988754
No 394
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=331.55 Aligned_cols=211 Identities=21% Similarity=0.292 Sum_probs=169.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
.++|+|+|+.|++|++++|+|||||||||||++|+|+.++. ...+|+|.++|.++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 45899999999999999999999999999999999998631 01389999999988532 235679999999887
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
+ +.||+||+.|+....+... ++ .....++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~----------~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND----------RK-----------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh----------HH-----------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 7 5899999998653321100 00 001123455677777544445554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+.+..|||||||||+||||++.+|+||+|||||+|||+.+...+.+.|+++.+ +.++++++|....+.+.||+|++
T Consensus 221 -~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 -KAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred -CCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 45678999999999999999999999999999999999999999999998743 36677789999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999884
No 395
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-34 Score=334.31 Aligned_cols=228 Identities=25% Similarity=0.378 Sum_probs=195.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++.+|++.+++ ..++|+||||++++||++||+|.||||||||+|+|+|..+ +.+|+|.++|.+.
T Consensus 8 ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 577888887763 4579999999999999999999999999999999999887 5699999999876
Q ss_pred Ccc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 046656 889 KQE----TFTRISGYCEQNDIHSPLVTVYESLLYSAWLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLS 963 (1326)
Q Consensus 889 ~~~----~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LS 963 (1326)
... ....-++.|.|+..+.|++||.||+.++...+. ..-++.+...+...++|+.+++....++.++ +||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCC
Confidence 422 234568999999999999999999988765544 2345667777789999999999644777775 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEE
Q 046656 964 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1043 (1326)
Q Consensus 964 gGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1043 (1326)
.||||.|.|||||..+++||+||||||.|+......+.+.+++++++|.+||++||.++ ++++.|||+.+|.+ |+++-
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999997 89999999999997 68888
Q ss_pred EcC-CCCC-hhhHHHHH
Q 046656 1044 VGP-LGSN-SSDLISYL 1058 (1326)
Q Consensus 1044 ~G~-~~~~-~~~~~~~f 1058 (1326)
.++ .++. .+++++..
T Consensus 226 ~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 226 TRPTAAETSEDELVRLM 242 (500)
T ss_pred ecccccCCCHHHHHHHh
Confidence 888 3443 34555543
No 396
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.2e-33 Score=319.11 Aligned_cols=220 Identities=23% Similarity=0.280 Sum_probs=175.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ ++.+|+|||++|++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478888887663 2469999999999999999999999999999999999731124689999999876
Q ss_pred Ccc---cccc-eEEEeecCCCCCCCCCHHHHHHHHHHhhcc----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 046656 889 KQE---TFTR-ISGYCEQNDIHSPLVTVYESLLYSAWLRLR----TEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGE 959 (1326)
Q Consensus 889 ~~~---~~~~-~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 959 (1326)
... ..++ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. ...++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 1222 478999999999999999998775332110 1112223345678899999997 35555442
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHH-hceeeEEecC
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1038 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~g 1038 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999998877999999999976 34444 799999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999986
No 397
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=320.22 Aligned_cols=202 Identities=23% Similarity=0.362 Sum_probs=167.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 212 (1326)
.+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~- 90 (241)
T PRK14250 15 GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE- 90 (241)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-
Confidence 346999999999999999999999999999999999999987 999999998875432 2457999999987776
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-ccccccccCc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTLVGDE 291 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~ 291 (1326)
.||+||+.++....+ . ....++.+++.+||+ +..+ .
T Consensus 91 ~tv~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~-----~ 127 (241)
T PRK14250 91 GTVKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYAT-----R 127 (241)
T ss_pred hhHHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhh-----C
Confidence 699999987532110 0 001235568888996 3344 3
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.++||+|++|+
T Consensus 128 ~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~ 206 (241)
T PRK14250 128 DVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLN 206 (241)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEe
Confidence 45679999999999999999999999999999999999999999999987653 24567778999999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 046656 372 DGQIVYQGPCELVL 385 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~ 385 (1326)
+|+++..|+++++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (241)
T PRK14250 207 KGILVEYAKTYDFF 220 (241)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988763
No 398
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.3e-33 Score=355.37 Aligned_cols=212 Identities=26% Similarity=0.397 Sum_probs=176.8
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP 887 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 887 (1326)
..++++||+|.|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 36899999998742 22459999999999999999999999999999999999887 458999999998
Q ss_pred CCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 046656 888 KKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLP 957 (1326)
Q Consensus 888 ~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~ 957 (1326)
+++ ..+++.++||+|++.+++ .|++||+.++. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 754 356788999999988776 59999997632 1222 2346677777776543 35556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +|+|+|++||+++ ..+.+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 45799999999999999999999999999999999999999999999885 5899999999986 4567999999986
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 399
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=323.45 Aligned_cols=215 Identities=21% Similarity=0.224 Sum_probs=172.8
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--C-CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 885 (1326)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 478999988763 2359999999999999999999999999999999999764 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~ 956 (1326)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-- 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDNA-- 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcCc--
Confidence 87632 134567999999988777 499999988643221 112222234567777777543 2233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 166 ---~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 166 ---YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 799999999986 5677899999998
Q ss_pred cCcEEEEEcCC
Q 046656 1037 RGGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~gg~~~~~G~~ 1047 (1326)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 6 789998874
No 400
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-34 Score=323.71 Aligned_cols=205 Identities=22% Similarity=0.297 Sum_probs=168.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 212 (1326)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++.
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVG 98 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhccc
Confidence 35899999999999999999999999999999999999987 999999998875432 2357999999974 6788
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.|+++|+.|.....+... .+....++.+++.+|+.+..+. .
T Consensus 99 ~~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 139 (269)
T PRK13648 99 SIVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADY-----E 139 (269)
T ss_pred ccHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhC-----C
Confidence 899999988654321100 0011234667899999876654 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
++.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.. +|+|++|++
T Consensus 140 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~ 217 (269)
T PRK13648 140 PNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNK 217 (269)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEEC
Confidence 5679999999999999999999999999999999999999999999987542 34566667888777765 999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+++++.
T Consensus 218 G~i~~~g~~~~~~ 230 (269)
T PRK13648 218 GTVYKEGTPTEIF 230 (269)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 401
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-34 Score=324.96 Aligned_cols=205 Identities=22% Similarity=0.312 Sum_probs=167.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-------ccceEEEEccCCC-
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-------PQRTAAYISQHDV- 208 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 208 (1326)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999987 999999998875421 1356999999852
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc-ccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV-CADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 287 (1326)
.+...||+||+.|.....+.. . .+....++.+++.+||.. ..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-- 140 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFE-- 140 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh--
Confidence 333579999998864322110 0 001123466788899963 334
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
..++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++
T Consensus 141 ---~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 141 ---KNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred ---CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 34567999999999999999999999999999999999999999999998854 3 556777889888999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 402
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=326.03 Aligned_cols=205 Identities=25% Similarity=0.344 Sum_probs=169.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC----ccceEEEEccCCC-CCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV----PQRTAAYISQHDV-HIG 211 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 211 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999998875421 2467999999863 344
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
..||.|++.|+....+... .+....++++++.+||+...++.
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 141 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHA---- 141 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCC----
Confidence 5799999998754322100 01122356789999998776654
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.. +|++++|+
T Consensus 142 -~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 142 -PHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 4579999999999999999999999999999999999999999999998653 35566667888888765 99999999
Q ss_pred CCeEEEEcChhhHH
Q 046656 372 DGQIVYQGPCELVL 385 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~ 385 (1326)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 403
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.08 Aligned_cols=215 Identities=20% Similarity=0.236 Sum_probs=174.3
Q ss_pred ceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEc
Q 046656 808 YSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITIS 884 (1326)
Q Consensus 808 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 884 (1326)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3588999988763 246999999999999999999999999999999999976421 248999999
Q ss_pred CccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc----cccccccc
Q 046656 885 GYPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK----PLRQSLVG 955 (1326)
Q Consensus 885 g~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg 955 (1326)
|.++.. ..+++.++|++|+..+++. |+.||+.+....+. ... ..++.++++++.+++. +..+..+
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~- 159 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YKG-NLDELVEDSLRRAAIWEEVKDKLKEKG- 159 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---chH-HHHHHHHHHHHHcccchhhHHHhcCCc-
Confidence 987632 2345679999999887764 99999987643221 111 2234467788888874 2233332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEE
Q 046656 956 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLM 1035 (1326)
Q Consensus 956 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1035 (1326)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|
T Consensus 160 ----~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 160 ----TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ----ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999865 799999999986 677889999999
Q ss_pred e--------cCcEEEEEcCC
Q 046656 1036 K--------RGGQEIYVGPL 1047 (1326)
Q Consensus 1036 ~--------~gg~~~~~G~~ 1047 (1326)
+ +.|++++.|+.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred ecccccccccCceEEEeCCH
Confidence 7 25899999986
No 404
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=321.68 Aligned_cols=214 Identities=21% Similarity=0.300 Sum_probs=170.0
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCC--CC---CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMN--EF---VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~---~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++. .. ..++.++|++|++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (253)
T PRK14267 16 SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPN 95 (253)
T ss_pred CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCc
Confidence 356999999999999999999999999999999999998762 113899999998875 21 12357999999998
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++.+||+||+.++....+.... . .+....++++++.+||.......
T Consensus 96 ~~~~~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~- 142 (253)
T PRK14267 96 PFPHLTIYDNVAIGVKLNGLVKS--------K------------------------KELDERVEWALKKAALWDEVKDR- 142 (253)
T ss_pred cCCCCcHHHHHHHHHHhcCccCC--------H------------------------HHHHHHHHHHHHHcCCccchhhh-
Confidence 89999999999986542211000 0 00111245667888874321111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+.+++..+||+|+
T Consensus 143 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~ 219 (253)
T PRK14267 143 LNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVA 219 (253)
T ss_pred hccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEE
Confidence 1345668999999999999999999999999999999999999999999999753 3 567778899989999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++++.|+++++.
T Consensus 220 ~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 220 FLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 405
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-34 Score=313.38 Aligned_cols=195 Identities=24% Similarity=0.345 Sum_probs=163.0
Q ss_pred ceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHHH
Q 046656 142 DVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEMTVRETLA 220 (1326)
Q Consensus 142 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 220 (1326)
|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999988754332 357999999998899999999998
Q ss_pred hhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChhh
Q 046656 221 FSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGGQ 300 (1326)
Q Consensus 221 f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 300 (1326)
++..... .. .+ +....++++++.+||++..++. +..|||||
T Consensus 93 ~~~~~~~-~~--------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KL--------TA-------------------------EDRQAIEVALARVGLAGLEKRL-----PGELSGGE 133 (211)
T ss_pred ccccccc-Cc--------cH-------------------------HHHHHHHHHHHHcCCHHHHhCC-----cccCCHHH
Confidence 7542110 00 00 0112356778999998766643 45799999
Q ss_pred hHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEc
Q 046656 301 KKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 379 (1326)
Q Consensus 301 kqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 379 (1326)
|||++||++++.+|++++|||||+|||+.++..+.+.|+++... .+.+|+.++|+..++.++||++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999988643 3556666899999999999999999999998754
No 406
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.7e-34 Score=319.58 Aligned_cols=217 Identities=25% Similarity=0.316 Sum_probs=170.6
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhccc--CCCCceeeEEEECCccCCCCCc----cceEEEEccC
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQL--DSSLKVSGRVTYNGHDMNEFVP----QRTAAYISQH 206 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~ 206 (1326)
+++.+++|+|+|+.+++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|+
T Consensus 9 ~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~ 85 (243)
T TIGR01978 9 SVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQY 85 (243)
T ss_pred EECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecc
Confidence 334457999999999999999999999999999999999995 565 8999999988754322 2348999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc-ccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV-CAD 285 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~d 285 (1326)
+.+++.+|++|++.+............ .. ...+....++.+++.+||+. ..+
T Consensus 86 ~~~~~~~t~~~~~~~~~~~~~~~~~~~---~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~ 138 (243)
T TIGR01978 86 PEEIPGVSNLEFLRSALNARRSARGEE---PL------------------------DLLDFLKLLKAKLALLGMDEEFLN 138 (243)
T ss_pred ccccCCcCHHHHHHHHHHHhhcccccc---cc------------------------cHHHHHHHHHHHHHHcCCchhhcc
Confidence 999999999999988643211000000 00 00011223567889999973 444
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh-C
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL-F 364 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~ 364 (1326)
..++ ..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.+|+.++|+.+++... +
T Consensus 139 ~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~ 212 (243)
T TIGR01978 139 RSVN----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKP 212 (243)
T ss_pred cccc----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcC
Confidence 3322 24999999999999999999999999999999999999999999999854 345667788888888888 8
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|++++|++|++++.|+++++.
T Consensus 213 d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 213 DYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred CeEEEEeCCEEEEecCHHHhc
Confidence 999999999999999987653
No 407
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.6e-34 Score=322.58 Aligned_cols=207 Identities=25% Similarity=0.333 Sum_probs=170.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc------cceEEEEccCC--
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP------QRTAAYISQHD-- 207 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 207 (1326)
.+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 9999999988764321 35699999985
Q ss_pred CCCCCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-cccc
Q 046656 208 VHIGEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCAD 285 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~d 285 (1326)
.+.+.+||+||+.+..... +.. . .+....++++++.+||+ ...+
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~ 145 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTSLD----------E------------------------SEQKARIAELLDMVGLRSEDAD 145 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh
Confidence 4567899999998754311 000 0 00112356678999995 4444
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
. .++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+...+.+++|
T Consensus 146 ~-----~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d 219 (265)
T TIGR02769 146 K-----LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQ 219 (265)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhc
Confidence 3 45679999999999999999999999999999999999999999999998653 35667778999999999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 220 RVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEEeCCEEEEECCHHHHc
Confidence 99999999999999998774
No 408
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-34 Score=320.49 Aligned_cols=212 Identities=18% Similarity=0.261 Sum_probs=168.4
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcc---cCCCCceeeEEEECCccCCCCC-----ccceEEEEccC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQ---LDSSLKVSGRVTYNGHDMNEFV-----PQRTAAYISQH 206 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 206 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|. .++. ..+|+|.++|.++.... .++.++|++|+
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~ 92 (250)
T PRK14245 14 GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQR 92 (250)
T ss_pred CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecC
Confidence 345699999999999999999999999999999999997 3331 13899999998875421 23569999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
+.+++ .||+||+.++.+..+.... ......++++++.+||.+...+
T Consensus 93 ~~~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 138 (250)
T PRK14245 93 PNPFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKD 138 (250)
T ss_pred CccCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhh
Confidence 88776 6999999886543211000 0011234667888888643222
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.. +..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+..++.++||+
T Consensus 139 ~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~ 214 (250)
T PRK14245 139 KL-KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--K-DYTIVIVTHNMQQAARVSDK 214 (250)
T ss_pred hh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhCCE
Confidence 11 24566899999999999999999999999999999999999999999999973 2 35667788999899999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|++|++++.|+++++.
T Consensus 215 v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 215 TAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 409
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.8e-34 Score=316.33 Aligned_cols=207 Identities=23% Similarity=0.292 Sum_probs=168.4
Q ss_pred eecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCC----CCceeeEEEECCccCCCCCcc-ceEEEEccCCC--CCC
Q 046656 139 ILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDS----SLKVSGRVTYNGHDMNEFVPQ-RTAAYISQHDV--HIG 211 (1326)
Q Consensus 139 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 211 (1326)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 89999999887544322 57999999974 556
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCc
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDE 291 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 291 (1326)
.+|++|++.+.....+.. . .+....++++++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 789999998754321110 0 00112356788999997421 11234
Q ss_pred cccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEec
Q 046656 292 MVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLS 371 (1326)
Q Consensus 292 ~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 371 (1326)
.+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 56679999999999999999999999999999999999999999999987652 35667778899999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 046656 372 DGQIVYQGPCELVL 385 (1326)
Q Consensus 372 ~G~iv~~G~~~~~~ 385 (1326)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988774
No 410
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-33 Score=319.36 Aligned_cols=215 Identities=25% Similarity=0.275 Sum_probs=172.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCcc-
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYP- 887 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 887 (1326)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 367888887663 2358999999999999999999999999999999999876 458999999976
Q ss_pred ----CCccc-------ccceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCc-cccccc
Q 046656 888 ----KKQET-------FTRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELK-PLRQSL 953 (1326)
Q Consensus 888 ----~~~~~-------~~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~ 953 (1326)
+.... .++.++|++|++. ..+..|+.|++.+..... . ........+.++++++.+++. ...++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 32211 1346899999874 345678999987542211 1 111123345688999999996 355655
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhcee
Q 046656 954 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDEL 1032 (1326)
Q Consensus 954 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1032 (1326)
+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++
T Consensus 146 ~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 P-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4 469999999999999999999999999999999999999999999998654 899999999986 566789999
Q ss_pred eEEecCcEEEEEcCC
Q 046656 1033 FLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1033 ~~l~~gg~~~~~G~~ 1047 (1326)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 799998874
No 411
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=323.68 Aligned_cols=212 Identities=23% Similarity=0.361 Sum_probs=173.4
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHI 210 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 210 (1326)
++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 17 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~ 93 (265)
T PRK10253 17 YGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTP 93 (265)
T ss_pred ECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCC
Confidence 34457999999999999999999999999999999999999887 9999999988754322 35699999999888
Q ss_pred CCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 211 GEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
+.+||+||+.++..-. ...... + ......++.+++.+||++..++
T Consensus 94 ~~~tv~~~~~~~~~~~~~~~~~~----------------~---------------~~~~~~~~~~l~~~~l~~~~~~--- 139 (265)
T PRK10253 94 GDITVQELVARGRYPHQPLFTRW----------------R---------------KEDEEAVTKAMQATGITHLADQ--- 139 (265)
T ss_pred CCCcHHHHHHhCcccccccccCC----------------C---------------HHHHHHHHHHHHHcCCHHHhcC---
Confidence 8999999998753110 000000 0 0011235677889999865554
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
.++.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+++|+|++
T Consensus 140 --~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~ 216 (265)
T PRK10253 140 --SVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIA 216 (265)
T ss_pred --CcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEE
Confidence 45679999999999999999999999999999999999999999999998653 355677788999999999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+++++.
T Consensus 217 l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 217 LREGKIVAQGAPKEIV 232 (265)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 412
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=351.83 Aligned_cols=207 Identities=26% Similarity=0.322 Sum_probs=174.7
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCCCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQNDIHSPLV 910 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~~ 910 (1326)
+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 569999999999999999999999999999999999876 4589999999876421 2345689999998888899
Q ss_pred CHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 046656 911 TVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 990 (1326)
Q Consensus 911 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPts 990 (1326)
||+||+.+..........+..+..+.++++++.+++.+..++.++ .|||||||||+|||+|+.+|++|||||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVA-----TLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 999999875321111111233334568899999999877777654 599999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCCCC
Q 046656 991 GLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGSN 1050 (1326)
Q Consensus 991 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~~~ 1050 (1326)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..+.
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 221 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAGL 221 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhhC
Confidence 99999999999999999878999999999986 57788999999986 799999987543
No 413
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=319.96 Aligned_cols=214 Identities=21% Similarity=0.283 Sum_probs=169.9
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHD 207 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 207 (1326)
+.+.+|+|+|+.|++||+++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|+.
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14256 15 GKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKP 94 (252)
T ss_pred CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCC
Confidence 34569999999999999999999999999999999999985 3111389999999887432 1245799999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++.+||+||+.++.+..+... . .+....++++++.+|+.......
T Consensus 95 ~~~~~~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 141 (252)
T PRK14256 95 NPFPAMSIYDNVIAGYKLNGRVN---------R------------------------SEADEIVESSLKRVALWDEVKDR 141 (252)
T ss_pred CCCCcCcHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 88999999999987643221000 0 00112345678888885421111
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
. +..+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. + ++|+.++|+.+++.++||++
T Consensus 142 ~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i 217 (252)
T PRK14256 142 L-KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYT 217 (252)
T ss_pred h-hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEE
Confidence 1 234667999999999999999999999999999999999999999999999853 3 56677889999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|+++..|+.+++.
T Consensus 218 ~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 218 AFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 414
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.7e-34 Score=316.66 Aligned_cols=202 Identities=25% Similarity=0.324 Sum_probs=166.1
Q ss_pred ecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCccceEEEEccCCCCCCCCCHHHHH
Q 046656 140 LKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQRTAAYISQHDVHIGEMTVRETL 219 (1326)
Q Consensus 140 L~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 219 (1326)
|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999999987 9999999988765332 348999999889999999999
Q ss_pred HhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChh
Q 046656 220 AFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGG 299 (1326)
Q Consensus 220 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 299 (1326)
.++....... . .. .+....++++++.+||++..++. +..||||
T Consensus 76 ~~~~~~~~~~--~------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--L------SK------------------------SERRAIVEEHIALVGLTEAADKR-----PGQLSGG 118 (230)
T ss_pred HHHHHhcccC--C------CH------------------------HHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHH
Confidence 8853210000 0 00 00112346678899998766644 4579999
Q ss_pred hhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEc
Q 046656 300 QKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 379 (1326)
Q Consensus 300 qkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 379 (1326)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999987653 3456677889999999999999999999999988
Q ss_pred ChhhH
Q 046656 380 PCELV 384 (1326)
Q Consensus 380 ~~~~~ 384 (1326)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 76543
No 415
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4.9e-34 Score=308.05 Aligned_cols=178 Identities=26% Similarity=0.329 Sum_probs=150.8
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-----ccccceEEEeecCCC-CCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-----ETFTRISGYCEQNDI-HSP 908 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 908 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999876 458999999987631 123567899999973 233
Q ss_pred CCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 046656 909 LVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 988 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 988 (1326)
..|++||+.+..... ..+..+..+.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPTH-----CLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998864322 22334444568899999999887777653 5999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Q 046656 989 TSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPS 1022 (1326)
Q Consensus 989 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1022 (1326)
|+|||+.++..+.+.|+++.++|+|||++||++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999875
No 416
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=323.16 Aligned_cols=212 Identities=22% Similarity=0.319 Sum_probs=167.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 46999999999999999999999999999999999998741 01389999999887531 124579999999887
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++. ||+||+.|+....+.... + .+....++++++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 999999986543221000 0 001123466788888864211111
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEE
Confidence 245668999999999999999999999999999999999999999999998743 3 5667788998899999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 417
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=323.51 Aligned_cols=211 Identities=24% Similarity=0.332 Sum_probs=171.4
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 212 (1326)
.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (265)
T PRK10575 23 GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEG 99 (265)
T ss_pred CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCC
Confidence 356999999999999999999999999999999999999887 9999999987653322 3569999999888889
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
+||.||+.++.... .. .... .+ ......++.+++.+||++..++.
T Consensus 100 ~tv~e~l~~~~~~~-~~-~~~~-------------~~---------------~~~~~~~~~~l~~~~l~~~~~~~----- 144 (265)
T PRK10575 100 MTVRELVAIGRYPW-HG-ALGR-------------FG---------------AADREKVEEAISLVGLKPLAHRL----- 144 (265)
T ss_pred ccHHHHHHhCcccc-cc-cccC-------------CC---------------HHHHHHHHHHHHHcCCHHHhcCC-----
Confidence 99999998753210 00 0000 00 00112356778899997655544
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|++++.. .+++|+.++|+.+++.+++|+|++|++
T Consensus 145 ~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~ 223 (265)
T PRK10575 145 VDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRG 223 (265)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998653 245667788999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|+++..|+.+++.
T Consensus 224 G~i~~~~~~~~~~ 236 (265)
T PRK10575 224 GEMIAQGTPAELM 236 (265)
T ss_pred CeEEEecCHHHhc
Confidence 9999999987663
No 418
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=319.89 Aligned_cols=212 Identities=20% Similarity=0.313 Sum_probs=166.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.
T Consensus 17 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 96 (252)
T PRK14239 17 KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPN 96 (252)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCc
Confidence 3469999999999999999999999999999999999853 4212389999999887421 12457999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ +||+||+.++....+.... ......++.+++.+|+.....+.
T Consensus 97 ~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~- 141 (252)
T PRK14239 97 PFP-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDR- 141 (252)
T ss_pred cCc-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHH-
Confidence 776 8999999986543221000 00112235567777764321111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.+.||+|+
T Consensus 142 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~ 218 (252)
T PRK14239 142 LHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTG 218 (252)
T ss_pred HhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEE
Confidence 1345668999999999999999999999999999999999999999999998743 3 567778899889999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++++.|+.+++.
T Consensus 219 ~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 219 FFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999998773
No 419
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=323.64 Aligned_cols=218 Identities=23% Similarity=0.318 Sum_probs=173.0
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC--------ccceEEEEccC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV--------PQRTAAYISQH 206 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~ 206 (1326)
+.+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 3456999999999999999999999999999999999999875223699999998764321 13468999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
+.+++.+||+||+.++..... . . ..... ... ..+....++.+++.+||++..|.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~--~-~------~~~~~--~~~---------------~~~~~~~~~~~l~~~~l~~~~~~ 148 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGST--P-F------WRTCF--SWF---------------TREQKQRALQALTRVGMVHFAHQ 148 (262)
T ss_pred cccccCCcHHHHHHhhhcccc--c-c------hhhhc--ccc---------------cHHHHHHHHHHHHHcCCHHHHhC
Confidence 888999999999987542100 0 0 00000 000 00112345678999999876664
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
.+..|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++. ++++|+.++|+.+++.+++|+
T Consensus 149 -----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~ 222 (262)
T PRK09984 149 -----RVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCER 222 (262)
T ss_pred -----CccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 44579999999999999999999999999999999999999999999998653 356777788999899999999
Q ss_pred EEEecCCeEEEEcChhhH
Q 046656 367 IILLSDGQIVYQGPCELV 384 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~ 384 (1326)
|++|++|++++.|+++++
T Consensus 223 i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 223 IVALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 420
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.6e-35 Score=334.67 Aligned_cols=212 Identities=25% Similarity=0.362 Sum_probs=179.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+++|+.+ ..++|+|+|+++++||.+||+|+||||||||++.|+|... +.+|+|.++|.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998643 3469999999999999999999999999999999999876 5699999999886
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQS-------LVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~vg~~~ 958 (1326)
.. ..+++.+++++|...++. -|+++||.... .+.+ ++.++++++.+||.++... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 335678899999876654 59999998642 2222 3458899999999876443 4554 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+..||||||||++|||+|++|.++++|||||.|||+.+.++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999998765 899999999975 4688999999985
Q ss_pred cEEEEEcCCC
Q 046656 1039 GQEIYVGPLG 1048 (1326)
Q Consensus 1039 g~~~~~G~~~ 1048 (1326)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 7999999864
No 421
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-34 Score=302.27 Aligned_cols=157 Identities=29% Similarity=0.444 Sum_probs=141.9
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ--ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++..|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 359999999999999999999999999999999999876 458999999987643 2345679999999988888899
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
.||+. ||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99863 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
|+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++|
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999877899999999986 577789999999875
No 422
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=319.11 Aligned_cols=211 Identities=20% Similarity=0.308 Sum_probs=167.8
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCCC-----ccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEFV-----PQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 208 (1326)
.+.+|+|+|+.+++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14270 16 EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPN 95 (251)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCC
Confidence 456999999999999999999999999999999999998651 113899999998875321 2456999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc-cccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC-ADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 287 (1326)
+++ +|++||+.|.....+.... .+....++.+++.+||... .+ .
T Consensus 96 ~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~-~ 140 (251)
T PRK14270 96 PFP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKD-D 140 (251)
T ss_pred cCC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhh-H
Confidence 776 8999999986543221000 0011224556778877421 11 1
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
-+..+..|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++.. + .+++.++|+..++.++||+|
T Consensus 141 -~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v 216 (251)
T PRK14270 141 -LKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYT 216 (251)
T ss_pred -hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEE
Confidence 1245668999999999999999999999999999999999999999999998754 3 56666888888999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+.+++.
T Consensus 217 ~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 217 AFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999998874
No 423
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.85 Aligned_cols=214 Identities=21% Similarity=0.259 Sum_probs=173.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC--C-eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 885 (1326)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899987763 24699999999999999999999999999999999997542 1 2589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGL 956 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 956 (1326)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 87531 234567999999988777 499999988653221 11 122345677788888743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 957 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 957 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
...||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 246999999999999999999999999999999999999999999999875 589999999986 6888999999998
Q ss_pred c--------CcEEEEEcCC
Q 046656 1037 R--------GGQEIYVGPL 1047 (1326)
Q Consensus 1037 ~--------gg~~~~~G~~ 1047 (1326)
+ .|+++..|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4799999875
No 424
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=322.15 Aligned_cols=212 Identities=25% Similarity=0.375 Sum_probs=172.0
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDVHI 210 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 210 (1326)
++++++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|+..++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (255)
T PRK11231 12 YGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTP 88 (255)
T ss_pred ECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCC
Confidence 33457999999999999999999999999999999999999887 999999998765432 135699999998888
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.++..-.. ..+... + .+....++++++.+||++..++.
T Consensus 89 ~~~tv~~~i~~~~~~~~--~~~~~~-------------~---------------~~~~~~~~~~l~~~~l~~~~~~~--- 135 (255)
T PRK11231 89 EGITVRELVAYGRSPWL--SLWGRL-------------S---------------AEDNARVNQAMEQTRINHLADRR--- 135 (255)
T ss_pred CCccHHHHHHhccchhh--hhccCC-------------C---------------HHHHHHHHHHHHHcCCHHHHcCC---
Confidence 88999999988532000 000000 0 00112346678889998766644
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+++++.++|+.+++.+++|++++|
T Consensus 136 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l 211 (255)
T PRK11231 136 --LTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVL 211 (255)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999998754 2556777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|+++..|+.+++.
T Consensus 212 ~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 212 ANGHVMAQGTPEEVM 226 (255)
T ss_pred ECCeEEEEcCHHHhc
Confidence 999999999987763
No 425
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=9.5e-34 Score=318.41 Aligned_cols=197 Identities=25% Similarity=0.365 Sum_probs=168.1
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCHH
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVTVY 913 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~ 913 (1326)
+|+|+||++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.++.. ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999864 38999999987643 12345689999998888889999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 046656 914 ESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVA-------NPSIIFMD 986 (1326)
Q Consensus 914 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~-------~p~illLD 986 (1326)
||+.+.... ..+.....+.++++++.++|.+..++.++ .||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSVN-----QLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 11223334568899999999877776653 599999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 987 EPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 987 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 57788999999985 799998875
No 426
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=315.40 Aligned_cols=204 Identities=26% Similarity=0.433 Sum_probs=171.3
Q ss_pred eecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHH
Q 046656 139 ILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEMTVRE 217 (1326)
Q Consensus 139 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 217 (1326)
+|+|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 9999999988765322 457999999998899999999
Q ss_pred HHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCC
Q 046656 218 TLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGIS 297 (1326)
Q Consensus 218 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 297 (1326)
|+.++....+... .+....++++++.+||.+..++. ++.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRK-----PETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9988643221100 00111245678889998766654 45799
Q ss_pred hhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEE
Q 046656 298 GGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVY 377 (1326)
Q Consensus 298 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 377 (1326)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++... +++++.++|..+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986532 4566668888889999999999999999999
Q ss_pred EcChhhHH
Q 046656 378 QGPCELVL 385 (1326)
Q Consensus 378 ~G~~~~~~ 385 (1326)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 427
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.4e-34 Score=361.45 Aligned_cols=207 Identities=27% Similarity=0.390 Sum_probs=165.3
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 213 (1326)
+++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||.++.+... ++.++||+|++.+| +.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HG 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-Cc
Confidence 56999999999999999999999999999999999999 76 8999999999877654 46899999998866 56
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
|++|||.++... . . . .++ .+++...+ .+..++ .|++..||.||+. .
T Consensus 438 TI~eNI~~g~~~--~-~-~---eei------------------~~al~~a~------l~~~i~--~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNPD--A-S-D---EQL------------------QQALENAW------VSEFLP--LLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCCC--C-C-H---HHH------------------HHHHHHhC------HHHHHH--hcccccccccccC-C
Confidence 999999986310 0 0 0 011 11110000 111222 3677889999975 5
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
..||||||||++||||++++|+|++||||||+||+.++..|.+.|+++. .++|+ +.++|.. +....||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~Tv-IiItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTT-LMVTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEE-EEEecCh-HHHHhCCEEEEEeCC
Confidence 6799999999999999999999999999999999999999999998863 23454 4466665 456779999999999
Q ss_pred eEEEEcChhhHHH
Q 046656 374 QIVYQGPCELVLD 386 (1326)
Q Consensus 374 ~iv~~G~~~~~~~ 386 (1326)
+++++|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998863
No 428
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=323.91 Aligned_cols=208 Identities=24% Similarity=0.321 Sum_probs=169.9
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 212 (1326)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999886212399999999875432 2357999999964 6778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+||+.|..+..+.. . .+....++.+++.+||++..+. .
T Consensus 100 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~-----~ 140 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------R------------------------PEMIKIVRDVLADVGMLDYIDS-----E 140 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcC-----C
Confidence 99999998864322110 0 0112235677899999876554 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+.+++ ..||++++|++
T Consensus 141 ~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 141 PANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999988653 355666678888777 57999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998874
No 429
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4e-34 Score=314.77 Aligned_cols=198 Identities=21% Similarity=0.350 Sum_probs=163.3
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
++.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 10 ~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (213)
T cd03262 10 FGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFN 86 (213)
T ss_pred ECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccc
Confidence 33456999999999999999999999999999999999999887 99999999877421 12357999999998
Q ss_pred CCCCCCHHHHHHhhhh-hccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 209 HIGEMTVRETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
+++.+||+||+.++.. .++.. . .+....++.+++.+||++..+.
T Consensus 87 ~~~~~t~~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~- 131 (213)
T cd03262 87 LFPHLTVLENITLAPIKVKGMS----------K------------------------AEAEERALELLEKVGLADKADA- 131 (213)
T ss_pred cCCCCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhh-
Confidence 8889999999988642 11100 0 0011234567888999876554
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
.+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++.+++|+|
T Consensus 132 ----~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i 205 (213)
T cd03262 132 ----YPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRV 205 (213)
T ss_pred ----CccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEE
Confidence 4567999999999999999999999999999999999999999999999865 3 456666889999999999999
Q ss_pred EEecCCeE
Q 046656 368 ILLSDGQI 375 (1326)
Q Consensus 368 ilL~~G~i 375 (1326)
++|++|++
T Consensus 206 ~~l~~g~i 213 (213)
T cd03262 206 IFMDDGRI 213 (213)
T ss_pred EEEeCCcC
Confidence 99999974
No 430
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.5e-34 Score=311.11 Aligned_cols=197 Identities=28% Similarity=0.388 Sum_probs=164.4
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56778776652 2469999999999999999999999999999999999876 45899999998753
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 046656 890 QETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKR 969 (1326)
Q Consensus 890 ~~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqr 969 (1326)
....++.++|++|++.+++..|+.||+.+....+. .. .+.++++++.++|.+..+..++ .||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPFG-----YLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCChh-----hcCHHHHHH
Confidence 22245678999999888888999999987543221 11 2347899999999877666653 599999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 970 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 970 l~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
++|||+|+.+|++|||||||+|||+.+...+++.|++++++|+|||++||++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998777999999999975 343 3 8887775
No 431
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.5e-34 Score=362.41 Aligned_cols=209 Identities=22% Similarity=0.365 Sum_probs=178.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|++|.++. ++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 340 ~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEh
Confidence 5899999998741 2359999999999999999999999999999999999987 4589999999987
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLR-------QSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~~ 958 (1326)
++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~- 473 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ- 473 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 4567889999999998875 9999998752 122 23478888888876543 4555553
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++.+ ++|+|++||+++ ....+|+|++|++
T Consensus 474 g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~- 549 (592)
T PRK10790 474 GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR- 549 (592)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999998764 799999999984 5677999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 550 G~i~~~G~~ 558 (592)
T PRK10790 550 GQAVEQGTH 558 (592)
T ss_pred CEEEEEcCH
Confidence 799999985
No 432
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=361.53 Aligned_cols=212 Identities=23% Similarity=0.335 Sum_probs=178.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++||+|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEEh
Confidence 6999999998842 12469999999999999999999999999999999999887 4689999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.++||+|++.+++ -|++||+.++. +...+ ++.++++++.+++.+. .|+.+|..
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~- 477 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN- 477 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC-
Confidence 53 346788999999998886 69999998742 11122 2346778888776543 45666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.||+|++|++
T Consensus 478 g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~- 553 (582)
T PRK11176 478 GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED- 553 (582)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 4799999999985 5678999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 799999985
No 433
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.51 Aligned_cols=197 Identities=28% Similarity=0.358 Sum_probs=162.1
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEEccCCCCC
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYISQHDVHI 210 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 210 (1326)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999887 9999999988765322 24699999998888
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+.+||+||+.+.....+... .+....++.+++.+||.+..+..
T Consensus 101 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 143 (228)
T PRK10584 101 PTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHL--- 143 (228)
T ss_pred CCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC---
Confidence 99999999988643221100 00112356778999998766543
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++ +.+|++++|
T Consensus 144 --~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 144 --PAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEE
Confidence 45799999999999999999999999999999999999999999999986533 45566678887776 559999999
Q ss_pred cCCeEEEE
Q 046656 371 SDGQIVYQ 378 (1326)
Q Consensus 371 ~~G~iv~~ 378 (1326)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 434
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=317.82 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=169.7
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCCCC
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDVHI 210 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 210 (1326)
++.+.+|+|+|+++++||+++|+||||||||||+++|+|.++|....+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 12 YGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred ECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 34457999999999999999999999999999999999997531123899999999876432 235799999998877
Q ss_pred CCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 211 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 211 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
+ .||+||+.++...++.... . ......++.+++.+||........ +
T Consensus 92 ~-~tv~eni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 137 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIKN--------K------------------------DEEEALVVDCLQKVGLFEEVKDKL-K 137 (246)
T ss_pred c-ccHHHHhhhHHhhcCcccC--------h------------------------HHHHHHHHHHHHHcCCChhhhHHh-c
Confidence 6 6999999986443211000 0 001122456788888853211111 3
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
+.++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++.+++|+|++|
T Consensus 138 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l 214 (246)
T PRK14269 138 QNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFF 214 (246)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEE
Confidence 45678999999999999999999999999999999999999999999998742 456777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 215 HLGELIEFGESKEFF 229 (246)
T ss_pred ECCEEEEECCHHHHH
Confidence 999999999988763
No 435
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.55 Aligned_cols=211 Identities=20% Similarity=0.284 Sum_probs=168.7
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 46999999999999999999999999999999999998641 12389999999887532 124579999999887
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++ .||+||+.++.+..+... + .+....++++++.+||....+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------K------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 76 699999998643221100 0 001123456688888864322222
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..++.||||||||++|||+++.+|++++|||||+|||+.++..+.+.|+++.. +.+|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhcCEEEE
Confidence 356778999999999999999999999999999999999999999999998742 35677788888899999999999
Q ss_pred ecCCeEEEEcChhhHH
Q 046656 370 LSDGQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~G~iv~~G~~~~~~ 385 (1326)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998773
No 436
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-33 Score=315.90 Aligned_cols=194 Identities=20% Similarity=0.272 Sum_probs=165.3
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCH
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
..+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|. +++++|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 44679999999999999999999999999999999999876 45899999984 3566777767778999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
.||+.+..... ..+.+...+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|||||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 2233444556788899999988777665 369999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
|+.++..+++.|+++.+.|+|||++||++. ++.+.+|++++|++ |+++..|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999998777999999999976 56778999999985 7899998864
No 437
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.33 Aligned_cols=214 Identities=22% Similarity=0.331 Sum_probs=169.0
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHD 207 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 207 (1326)
+.+++|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (258)
T PRK14241 15 GSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRP 94 (258)
T ss_pred CCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccc
Confidence 34569999999999999999999999999999999999986410 1389999999876421 1235799999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++.+||+||+.++....+... + .+....++.+++.+||.......
T Consensus 95 ~~~~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 141 (258)
T PRK14241 95 NPFPTMSIRDNVVAGLKLNGVRN---------K------------------------KDLDELVEKSLRGANLWNEVKDR 141 (258)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhH
Confidence 88999999999988654321100 0 00112345678888874211111
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
. +..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++|+|
T Consensus 142 ~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i 217 (258)
T PRK14241 142 L-DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQT 217 (258)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEE
Confidence 1 245668999999999999999999999999999999999999999999998743 3 56777889999999999999
Q ss_pred EEec------CCeEEEEcChhhHH
Q 046656 368 ILLS------DGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~------~G~iv~~G~~~~~~ 385 (1326)
++|+ +|++++.|+++++.
T Consensus 218 ~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 218 AFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEecccCCCCceEEecCCHHHHH
Confidence 9996 79999999988764
No 438
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.3e-33 Score=315.30 Aligned_cols=208 Identities=25% Similarity=0.384 Sum_probs=172.7
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 213 (1326)
..+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 11 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (237)
T TIGR00968 11 GSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHL 87 (237)
T ss_pred CCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCC
Confidence 3457999999999999999999999999999999999999887 9999999988764333 35799999999888899
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
|++||+.+.....+... . .....++++++.+++....+. .+
T Consensus 88 t~~enl~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~-----~~ 128 (237)
T TIGR00968 88 TVRDNIAFGLEIRKHPK----------A------------------------KIKARVEELLELVQLEGLGDR-----YP 128 (237)
T ss_pred cHHHHHHhHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCHhHhhC-----Ch
Confidence 99999988654321100 0 001124567888898765554 44
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
+.||||||||++||++++.+|++++|||||+|||..++..+.+.|++.+. ..+.+++.++|...++.+++|+|++|++|
T Consensus 129 ~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g 207 (237)
T TIGR00968 129 NQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNG 207 (237)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECC
Confidence 57999999999999999999999999999999999999999999998754 22456666788888899999999999999
Q ss_pred eEEEEcChhhHH
Q 046656 374 QIVYQGPCELVL 385 (1326)
Q Consensus 374 ~iv~~G~~~~~~ 385 (1326)
++++.|+.+++.
T Consensus 208 ~i~~~~~~~~~~ 219 (237)
T TIGR00968 208 KIEQIGSPDEVY 219 (237)
T ss_pred EEEEecCHHHHH
Confidence 999999988764
No 439
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=317.32 Aligned_cols=219 Identities=22% Similarity=0.280 Sum_probs=174.5
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCC--C-CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 467888887653 2469999999999999999999999999999999999753 1 12589999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGES 960 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 960 (1326)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+...+++.++++.+++.+........ ...
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87642 1345679999999888875 99999987643221 112233445688899999885421111111 134
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||++||++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999864 899999999986 67888999999985 79
Q ss_pred EEEEcCC
Q 046656 1041 EIYVGPL 1047 (1326)
Q Consensus 1041 ~~~~G~~ 1047 (1326)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999875
No 440
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.7e-34 Score=320.34 Aligned_cols=209 Identities=27% Similarity=0.393 Sum_probs=171.2
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIG 211 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 211 (1326)
+++.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAV 88 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCC
Confidence 3457999999999999999999999999999999999999987 9999999988765322 346899999987788
Q ss_pred CCCHHHHHHhhhh-hccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccC
Q 046656 212 EMTVRETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGD 290 (1326)
Q Consensus 212 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 290 (1326)
.+||+||+.++.. .... + .. +. .+....++++++.+||.+..++
T Consensus 89 ~~tv~e~l~~~~~~~~~~---~-------------~~-~~--------------~~~~~~~~~~l~~~~l~~~~~~---- 133 (256)
T TIGR03873 89 PLTVRDVVALGRIPHRSL---W-------------AG-DS--------------PHDAAVVDRALARTELSHLADR---- 133 (256)
T ss_pred CCCHHHHHHhcchhhhhh---c-------------cC-CC--------------HHHHHHHHHHHHHcCcHhhhcC----
Confidence 8999999988521 0000 0 00 00 0011234667888999765554
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|++|
T Consensus 134 -~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (256)
T TIGR03873 134 -DMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVL 210 (256)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4457999999999999999999999999999999999999999999998753 3566777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 046656 371 SDGQIVYQGPCELV 384 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~ 384 (1326)
++|+++..|+.+++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 211 DGGRVVAAGPPREV 224 (256)
T ss_pred eCCCEEEecCHHHh
Confidence 99999999998776
No 441
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=317.46 Aligned_cols=216 Identities=23% Similarity=0.291 Sum_probs=173.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC----eeEEEEEEc
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG----YISGNITIS 884 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~----~~~G~i~i~ 884 (1326)
.+.++++++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. ...|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 477888887663 356999999999999999999999999999999999986532 122555555
Q ss_pred CccCCc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 046656 885 GYPKKQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP----LRQSLVGLP 957 (1326)
Q Consensus 885 g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~~ 957 (1326)
|.+... ...++.++|++|++.+++.+|++||+.+..... .....++..+.++++++.+++.+ ..+..+
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--- 151 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSH--GIKEKREIKKIVEECLRKVGLWKEVYDRLNSPA--- 151 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHcCCCccchhhhcCCc---
Confidence 555421 234567999999999888899999998864322 11123344456889999999964 333332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEec
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKR 1037 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1037 (1326)
..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|++
T Consensus 152 --~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 152 --SQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 699999999986 56688999999985
Q ss_pred CcEEEEEcCC
Q 046656 1038 GGQEIYVGPL 1047 (1326)
Q Consensus 1038 gg~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799998875
No 442
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.6e-32 Score=349.96 Aligned_cols=123 Identities=22% Similarity=0.262 Sum_probs=99.2
Q ss_pred CCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCcEEE
Q 046656 909 LVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-RQSLVGLPGESGLSTEQRKRLTIAVELVA---NPSIIF 984 (1326)
Q Consensus 909 ~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~---~p~ill 984 (1326)
.+||.|.+.|...+. . .....++|+.++|... .++.+ ..|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~~-----~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQPA-----TTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 356777776654321 0 1124578888998753 44444 3699999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe-----cCcEEEEEcCC
Q 046656 985 MDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1047 (1326)
Q Consensus 985 LDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~G~~ 1047 (1326)
|||||+|||+.....+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 346799999994 57999999985
No 443
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.06 Aligned_cols=212 Identities=18% Similarity=0.294 Sum_probs=167.2
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+++++||+++|+|||||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|++.
T Consensus 24 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 103 (259)
T PRK14274 24 QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGN 103 (259)
T ss_pred CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCc
Confidence 3569999999999999999999999999999999999986 3212389999999887421 12357999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++. ||+||+.|..+..+... + .+....++.+++.+|+.+......
T Consensus 104 ~~~~-tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~l 149 (259)
T PRK14274 104 PFPQ-SIFDNVAYGPRIHGTKN---------K------------------------KKLQEIVEKSLKDVALWDEVKDRL 149 (259)
T ss_pred cccc-CHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhhh
Confidence 8875 99999988643321100 0 001122455677888753211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.+++.++|+.+++.+++|+++
T Consensus 150 -~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~ 225 (259)
T PRK14274 150 -HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTA 225 (259)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEE
Confidence 245668999999999999999999999999999999999999999999998742 3566668888889999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++.+|+++++.
T Consensus 226 ~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 226 FFYMGELVECNDTNKMF 242 (259)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998763
No 444
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.1e-34 Score=316.27 Aligned_cols=209 Identities=26% Similarity=0.398 Sum_probs=167.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++. ..+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 567777765521 12459999999999999999999999999999999999876 45899999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 046656 890 Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVG------LPGES 960 (1326)
Q Consensus 890 ~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg------~~~~~ 960 (1326)
. ...++.++|++|++.+++ .|+.|++.+... ... .+.+.++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223457899999988776 699999976421 111 2235678888888776665431 01234
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcE
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1040 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1040 (1326)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 89999999986 3 478999999986 67
Q ss_pred EEEEc
Q 046656 1041 EIYVG 1045 (1326)
Q Consensus 1041 ~~~~G 1045 (1326)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 445
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=314.38 Aligned_cols=202 Identities=22% Similarity=0.362 Sum_probs=168.6
Q ss_pred cceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-cceEEEEccCCCCCCCCCHHHHH
Q 046656 141 KDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-QRTAAYISQHDVHIGEMTVRETL 219 (1326)
Q Consensus 141 ~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l 219 (1326)
.|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+
T Consensus 16 ~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l 92 (232)
T PRK10771 16 MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNI 92 (232)
T ss_pred ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHH
Confidence 3899999999999999999999999999999999987 9999999988754322 35799999999889999999999
Q ss_pred HhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCChh
Q 046656 220 AFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGISGG 299 (1326)
Q Consensus 220 ~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 299 (1326)
.++... ... . .+ .....++++++.+||++..++. +..||||
T Consensus 93 ~~~~~~-~~~--~------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 133 (232)
T PRK10771 93 GLGLNP-GLK--L------NA-------------------------AQREKLHAIARQMGIEDLLARL-----PGQLSGG 133 (232)
T ss_pred hccccc-ccC--C------CH-------------------------HHHHHHHHHHHHcCcHHHHhCC-----cccCCHH
Confidence 875321 000 0 00 0112356778999998766654 4579999
Q ss_pred hhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEEEc
Q 046656 300 QKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 379 (1326)
Q Consensus 300 qkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 379 (1326)
|||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++++.|
T Consensus 134 ~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g 212 (232)
T PRK10771 134 QRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDG 212 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999999999876532 456666889988999999999999999999999
Q ss_pred ChhhHH
Q 046656 380 PCELVL 385 (1326)
Q Consensus 380 ~~~~~~ 385 (1326)
+.+++.
T Consensus 213 ~~~~~~ 218 (232)
T PRK10771 213 PTDELL 218 (232)
T ss_pred CHHHHH
Confidence 988764
No 446
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.3e-33 Score=316.18 Aligned_cols=219 Identities=25% Similarity=0.299 Sum_probs=170.0
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 46777777653 24699999999999999999999999999999999998421146899999998764
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHH-hhc--c-CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 046656 890 QE---T-FTRISGYCEQNDIHSPLVTVYESLLYSAW-LRL--R-TEVDSETRKMFIEEIMELVELK-PLRQSLVGLPGES 960 (1326)
Q Consensus 890 ~~---~-~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~-lr~--~-~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 960 (1326)
.. . .++.++|++|++.+++.+|+.+++.+... ++. . .........++++++++.+++. +..+..+. .
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 22468999999888887777776543211 110 0 0112223345678899999985 44444431 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHH-hceeeEEecCc
Q 046656 961 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1039 (1326)
Q Consensus 961 ~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gg 1039 (1326)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||++||++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 59999999999999999999999999999999999999999999998877899999999976 34444 799999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89999875
No 447
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=326.04 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=166.7
Q ss_pred eeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCC----C----CccceEEEEccCCC-
Q 046656 138 TILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNE----F----VPQRTAAYISQHDV- 208 (1326)
Q Consensus 138 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 208 (1326)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5899999999999999999999999999999999999887 9999999987642 1 12357999999863
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-cccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTL 287 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 287 (1326)
.+...||+||+.|+....+.. . .+....++.+++.+||+ ...+
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~-- 145 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN----------K------------------------QEAYKKVPELLKLVQLPEDYVK-- 145 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhc--
Confidence 233469999999864322110 0 00112245678888984 4444
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||+|
T Consensus 146 ---~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 146 ---RSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred ---CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 345679999999999999999999999999999999999999999999988653 3556777899999999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 448
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=329.25 Aligned_cols=218 Identities=18% Similarity=0.198 Sum_probs=172.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC-ceeeEEEECCccCCCCCc-------cceEEEEccCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL-KVSGRVTYNGHDMNEFVP-------QRTAAYISQHD 207 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 207 (1326)
...+|+|||+.|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 3569999999999999999999999999999999999986421 138999999998765432 23699999986
Q ss_pred C--CCCCCCHHHHHHhhhhhccC-CccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 208 V--HIGEMTVRETLAFSARCQGV-GSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 208 ~--~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
. +.+.+||.+++.+....... +..+. + ..+....+.++|+.+||++..
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~------~-----------------------~~~~~~~~~~~L~~~gL~~~~ 149 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQ------R-----------------------FGWRKRRAIELLHRVGIKDHK 149 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccc------c-----------------------HHHHHHHHHHHHHHCCCCChH
Confidence 5 57889999999764321100 00000 0 001122356789999997532
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+ +-+..+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+. .+.++++++|+...+.+++
T Consensus 150 ~--~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~ 226 (330)
T PRK15093 150 D--AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWA 226 (330)
T ss_pred H--HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhC
Confidence 2 123567789999999999999999999999999999999999999999999998653 3567777999999999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|+|++|++|+|++.|+.+++.
T Consensus 227 dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 227 DKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred CEEEEEECCEEEEECCHHHHH
Confidence 999999999999999998774
No 449
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-33 Score=279.38 Aligned_cols=203 Identities=27% Similarity=0.360 Sum_probs=173.2
Q ss_pred ccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc-------cceEEEE
Q 046656 131 TTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP-------QRTAAYI 203 (1326)
Q Consensus 131 ~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv 203 (1326)
.....+.+||++|++.+++||-++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++...+. .+.+|+|
T Consensus 17 g~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfV 93 (228)
T COG4181 17 GQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFV 93 (228)
T ss_pred cCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEE
Confidence 33456788999999999999999999999999999999999999998 9999999999865532 2679999
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccc
Q 046656 204 SQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVC 283 (1326)
Q Consensus 204 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 283 (1326)
+|...++|+||-.||+...+.++|-+.+. ........|+.+||.+-
T Consensus 94 FQSF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~R 139 (228)
T COG4181 94 FQSFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKR 139 (228)
T ss_pred EEeeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCcccc
Confidence 99999999999999999988877632210 01123456889999876
Q ss_pred ccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhh
Q 046656 284 ADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDL 363 (1326)
Q Consensus 284 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 363 (1326)
.+ .++.+|||||+|||+||||++..|+|||-||||-.||..|..+|.+.|..+.+. .+++++.++|+. ....-
T Consensus 140 l~-----HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~R 212 (228)
T COG4181 140 LT-----HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAAR 212 (228)
T ss_pred cc-----cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHh
Confidence 55 456789999999999999999999999999999999999999999999998764 578888788875 56778
Q ss_pred CCeEEEecCCeEEE
Q 046656 364 FDDIILLSDGQIVY 377 (1326)
Q Consensus 364 ~D~vilL~~G~iv~ 377 (1326)
|||.+-|.+|+++.
T Consensus 213 c~R~~r~~~G~l~~ 226 (228)
T COG4181 213 CDRQLRLRSGRLVE 226 (228)
T ss_pred hhheeeeecceecc
Confidence 99999999999874
No 450
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-34 Score=303.19 Aligned_cols=159 Identities=32% Similarity=0.440 Sum_probs=142.7
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc-----ccccceEEEeecCCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ-----ETFTRISGYCEQNDIHSPL 909 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 909 (1326)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++..++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999876 468999999987542 2345679999999888888
Q ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 046656 910 VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 989 (1326)
Q Consensus 910 ~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPt 989 (1326)
.|++|++.+. ||+|||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 8999987542 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 990 SGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 990 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999877 899999999986 566689999999864
No 451
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=318.03 Aligned_cols=212 Identities=22% Similarity=0.348 Sum_probs=165.9
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCC--CCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDS--SLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+++++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14240 15 DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPN 94 (250)
T ss_pred CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCc
Confidence 34699999999999999999999999999999999998753 112389999999887531 12457999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ +||+||+.++....+.... .+....++++++.+++.+......
T Consensus 95 ~~~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~ 140 (250)
T PRK14240 95 PFP-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH
Confidence 777 8999999986543221000 001122345566776642111111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+.+++.+.+|+|+
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~v~ 216 (250)
T PRK14240 141 -KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHNMQQASRISDKTA 216 (250)
T ss_pred -hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeCHHHHHhhCCEEE
Confidence 245668999999999999999999999999999999999999999999998742 3566668888888999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+.+++.
T Consensus 217 ~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 217 FFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988763
No 452
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.1e-33 Score=307.20 Aligned_cols=183 Identities=25% Similarity=0.302 Sum_probs=154.7
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc--ccccceEEEeecCCCCCCCCCH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ--ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (198)
T TIGR01189 13 RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELSA 90 (198)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCcH
Confidence 569999999999999999999999999999999999876 458999999987532 2244678999999888888999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 046656 913 YESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 992 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgL 992 (1326)
.||+.+....+. . + ++.++++++.+++.+..++.++ .||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~L 158 (198)
T TIGR01189 91 LENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPAA-----QLSAGQQRRLALARLWLSRAPLWILDEPTTAL 158 (198)
T ss_pred HHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987543321 1 1 2357889999999887777654 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeE
Q 046656 993 DARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFL 1034 (1326)
Q Consensus 993 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1034 (1326)
|+.++..+++.|+++.++|.|||++||++. + ..+++++.
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~--~~~~~~~~ 197 (198)
T TIGR01189 159 DKAGVALLAGLLRAHLARGGIVLLTTHQDL-G--LVEARELR 197 (198)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEcccc-c--ccceEEee
Confidence 999999999999998777999999999975 2 23466653
No 453
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-34 Score=319.94 Aligned_cols=195 Identities=27% Similarity=0.347 Sum_probs=156.4
Q ss_pred EeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCCH
Q 046656 836 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVTV 912 (1326)
Q Consensus 836 ~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~Tv 912 (1326)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 59999999999999999999999999999999999876 468999999987532 234567899999988776 699
Q ss_pred HHHHHHHHHhhccCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 046656 913 YESLLYSAWLRLRTEVDSETRK-----MFIEEIMELV--ELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 985 (1326)
Q Consensus 913 ~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illL 985 (1326)
+||+.+.... ....... ..+++.++.+ ++....+..+ ..||+|||||++|||+|+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGERG-----VKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCC-----CcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 1111111 1234445544 4444444332 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 986 DEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 986 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
||||+|||+.++..+.+.|+++.+ |.|||++||++. ++ +.+|++++|++ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 999999999999999999999864 899999999986 45 45999999996 688888874
No 454
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.5e-34 Score=357.88 Aligned_cols=211 Identities=27% Similarity=0.419 Sum_probs=178.3
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 338 ~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~i 404 (574)
T PRK11160 338 SLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQPI 404 (574)
T ss_pred eEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6999999998842 12359999999999999999999999999999999999887 4689999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLR------QSLVGLPGE 959 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~vg~~~~ 959 (1326)
++ ..+++.++||+|++.+++ .|++||+.++. .+.+ ++.++++++.+++.+.. |+.+|.. +
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~-g 473 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG-G 473 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----CccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-C
Confidence 54 346778999999998876 59999998752 1222 34578899999987653 4455543 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||||||||++|||||+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++ |
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~-G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN-G 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999885 4899999999986 3467999999985 7
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
+++..|+.
T Consensus 550 ~i~~~g~~ 557 (574)
T PRK11160 550 QIIEQGTH 557 (574)
T ss_pred eEEEeCCH
Confidence 99999985
No 455
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=319.25 Aligned_cols=210 Identities=19% Similarity=0.270 Sum_probs=166.4
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|+..+
T Consensus 26 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 105 (260)
T PRK10744 26 FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTP 105 (260)
T ss_pred eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCcc
Confidence 469999999999999999999999999999999999986 2111389999999887421 124579999999877
Q ss_pred CCCCCHHHHHHhhhhhc-cCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 210 IGEMTVRETLAFSARCQ-GVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
++ .||+||+.++.... +.. . .+....++++++.+|+........
T Consensus 106 ~~-~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 150 (260)
T PRK10744 106 FP-MSIYDNIAFGVRLFEKLS----------R------------------------AEMDERVEWALTKAALWNEVKDKL 150 (260)
T ss_pred Cc-CcHHHHHhhhHhhcCCCC----------H------------------------HHHHHHHHHHHHHcCCChhhHHHH
Confidence 76 89999998865322 110 0 001123456788888742111111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.+|+.++|+..++.+++|+++
T Consensus 151 -~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~ 226 (260)
T PRK10744 151 -HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNMQQAARCSDYTA 226 (260)
T ss_pred -hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEE
Confidence 244568999999999999999999999999999999999999999999998742 3567778898889999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+.+++.
T Consensus 227 ~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 227 FMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 456
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=317.54 Aligned_cols=214 Identities=20% Similarity=0.297 Sum_probs=168.7
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCCC-----ccceEEEEccCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEFV-----PQRTAAYISQHD 207 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 207 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|..+ |....+|+|.++|.++.... .++.++|++|++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 95 (251)
T PRK14244 16 GSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKP 95 (251)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCc
Confidence 34579999999999999999999999999999999999976 21113899999998764321 245799999998
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++. ||+||+.+.....+.... . .+....++.+++.+||.+...+.
T Consensus 96 ~~~~~-tv~~ni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (251)
T PRK14244 96 NPFPK-SIYDNVAYGPKLHGLAKN--------K------------------------KKLDEIVEKSLTSVGLWEELGDR 142 (251)
T ss_pred ccccC-CHHHHHHHHHHhcCCCCC--------H------------------------HHHHHHHHHHHHHcCCCchhhhH
Confidence 87875 999999886432211000 0 00112245678888986532222
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
. +..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i 218 (251)
T PRK14244 143 L-KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRV 218 (251)
T ss_pred h-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEE
Confidence 2 24566899999999999999999999999999999999999999999999873 2 466777889988999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 219 AFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 457
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-33 Score=309.41 Aligned_cols=202 Identities=26% Similarity=0.395 Sum_probs=165.6
Q ss_pred cccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-------ccceEEE
Q 046656 130 LTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-------PQRTAAY 202 (1326)
Q Consensus 130 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~y 202 (1326)
++++++++.+ |+|+.+++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|
T Consensus 6 l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 79 (214)
T cd03297 6 IEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGL 79 (214)
T ss_pred eeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEE
Confidence 3445555555 99999999 999999999999999999999999987 999999998764211 2357999
Q ss_pred EccCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcc
Q 046656 203 ISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDV 282 (1326)
Q Consensus 203 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 282 (1326)
++|++.+++.+|++||+.+..... . .. .....++.+++.+||++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~---~--------~~-------------------------~~~~~~~~~l~~~~l~~ 123 (214)
T cd03297 80 VFQQYALFPHLNVRENLAFGLKRK---R--------NR-------------------------EDRISVDELLDLLGLDH 123 (214)
T ss_pred EecCCccCCCCCHHHHHHHHHhhC---C--------HH-------------------------HHHHHHHHHHHHcCCHh
Confidence 999998888999999998754211 0 00 00122456788999976
Q ss_pred cccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHh
Q 046656 283 CADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYD 362 (1326)
Q Consensus 283 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 362 (1326)
..+. .+..||||||||++||++++.+|++++|||||+|||+.++..+.+.+++++.. .+++++.++|+.+++.+
T Consensus 124 ~~~~-----~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~ 197 (214)
T cd03297 124 LLNR-----YPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEY 197 (214)
T ss_pred Hhhc-----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHH
Confidence 5553 45679999999999999999999999999999999999999999999998653 25567778899999999
Q ss_pred hCCeEEEecCCeEEEEc
Q 046656 363 LFDDIILLSDGQIVYQG 379 (1326)
Q Consensus 363 ~~D~vilL~~G~iv~~G 379 (1326)
++|++++|++|+++.+|
T Consensus 198 ~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 198 LADRIVVMEDGRLQYIG 214 (214)
T ss_pred hcCEEEEEECCEEEecC
Confidence 99999999999998765
No 458
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=305.24 Aligned_cols=195 Identities=26% Similarity=0.389 Sum_probs=170.7
Q ss_pred ceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCC-------CccceEEEEccCCCCCCCCC
Q 046656 142 DVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEF-------VPQRTAAYISQHDVHIGEMT 214 (1326)
Q Consensus 142 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 214 (1326)
++++..+.-.+|||-|+||||||||+|+|+|+.+|+ +|.|.+||..+.+. ..+|++|||+|+-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 677777775799999999999999999999999998 99999999776432 12589999999999999999
Q ss_pred HHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcccc
Q 046656 215 VRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVR 294 (1326)
Q Consensus 215 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 294 (1326)
|+-||.|+...- . ...-|++.+.||++|..+ +++.
T Consensus 93 VrgNL~YG~~~~------------~----------------------------~~~fd~iv~lLGI~hLL~-----R~P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS------------M----------------------------RAQFDQLVALLGIEHLLD-----RYPG 127 (352)
T ss_pred Eecchhhhhccc------------c----------------------------hHhHHHHHHHhCcHHHHh-----hCCC
Confidence 999999975321 0 011367788999999876 6677
Q ss_pred CCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCe
Q 046656 295 GISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQ 374 (1326)
Q Consensus 295 ~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 374 (1326)
.|||||||||+|||||.+.|++|+||||.+.||-....+++-.|.++.+.. +.-|+.++|..+|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 899999999999999999999999999999999999999999999987754 4567779999999999999999999999
Q ss_pred EEEEcChhhHH
Q 046656 375 IVYQGPCELVL 385 (1326)
Q Consensus 375 iv~~G~~~~~~ 385 (1326)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999999885
No 459
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-33 Score=309.08 Aligned_cols=199 Identities=20% Similarity=0.311 Sum_probs=165.6
Q ss_pred eecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC-ccceEEEEccCCCCCCCCCHHH
Q 046656 139 ILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV-PQRTAAYISQHDVHIGEMTVRE 217 (1326)
Q Consensus 139 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 217 (1326)
+++|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999987 999999998875432 2467999999998899999999
Q ss_pred HHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccccCCC
Q 046656 218 TLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMVRGIS 297 (1326)
Q Consensus 218 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 297 (1326)
|+.+..... .... .+....++++++.+||++..++ .++.||
T Consensus 90 n~~~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKLN---------------------------------AEQQEKVVDAAQQVGIADYLDR-----LPEQLS 130 (213)
T ss_pred HHHhHhhcc-CCcc---------------------------------HHHHHHHHHHHHHcCcHHHhhC-----CcccCC
Confidence 998753210 0000 0011234567889999766554 455799
Q ss_pred hhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCCeEEE
Q 046656 298 GGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDGQIVY 377 (1326)
Q Consensus 298 GGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 377 (1326)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++... .+++|++++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999987642 35667778899989999999999999999999
Q ss_pred EcC
Q 046656 378 QGP 380 (1326)
Q Consensus 378 ~G~ 380 (1326)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 460
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=319.96 Aligned_cols=216 Identities=25% Similarity=0.301 Sum_probs=171.2
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCCC----ccceEEEEcc
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEFV----PQRTAAYISQ 205 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q 205 (1326)
.+++.+++|+|+|+.+++||+++|+||||||||||+++|+|+++|. ...+|+|.++|.++.+.. .++.++|++|
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q 108 (276)
T PRK14271 29 LGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQ 108 (276)
T ss_pred EEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEecc
Confidence 3344567999999999999999999999999999999999998751 013899999998875431 2457999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
++.+++ .||+||+.++........ . .+....++.+++.+||....+
T Consensus 109 ~~~l~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~ 154 (276)
T PRK14271 109 RPNPFP-MSIMDNVLAGVRAHKLVP---------R------------------------KEFRGVAQARLTEVGLWDAVK 154 (276)
T ss_pred CCccCC-ccHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCCCchhh
Confidence 988777 899999988643211000 0 001112355678888865332
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
+.. +..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + .+|++++|+.+++.+++|
T Consensus 155 ~~l-~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 230 (276)
T PRK14271 155 DRL-SDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISD 230 (276)
T ss_pred hHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCC
Confidence 222 245668999999999999999999999999999999999999999999998753 3 567778899999999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
++++|++|++++.|+++++.
T Consensus 231 ri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 231 RAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998774
No 461
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=317.20 Aligned_cols=212 Identities=22% Similarity=0.351 Sum_probs=168.1
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCC--CCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDS--SLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
++++|+|+|+.+++||+++|+|||||||||||++|+|.++| ....+|+|.++|.++... ..++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 45699999999999999999999999999999999999874 111389999999876531 12457999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.++....+...+ ......+++.++.+|+....+. .
T Consensus 95 ~~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~-~ 139 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKS-E 139 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHH-H
Confidence 777 8999999986533211000 0011124556777787532111 1
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
.+..+.+||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. + ++++.++|+..++.+++|+|+
T Consensus 140 ~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~ 216 (250)
T PRK14262 140 LNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIA 216 (250)
T ss_pred HhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEE
Confidence 2355678999999999999999999999999999999999999999999998743 3 567778888888999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 217 FMYRGELIEYGPTREIV 233 (250)
T ss_pred EEECCEEEEecCHHHHH
Confidence 99999999999988764
No 462
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=316.45 Aligned_cols=214 Identities=22% Similarity=0.250 Sum_probs=173.9
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 578899987763 246999999999999999999999999999999999986531 2689999999
Q ss_pred ccCC----c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCH-HHHHHHHHHHHHHcCCcc----ccccc
Q 046656 886 YPKK----Q---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDS-ETRKMFIEEIMELVELKP----LRQSL 953 (1326)
Q Consensus 886 ~~~~----~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~-~~~~~~v~~~l~~l~l~~----~~~~~ 953 (1326)
.+.. . ..+++.++|++|+..+++. |++||+.+..... .... ...++.++++++.+++.+ ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR---GVKRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc---CCChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 7642 1 1345678999999888875 9999998764322 1111 222355788888888742 23333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceee
Q 046656 954 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELF 1033 (1326)
Q Consensus 954 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~ 1033 (1326)
+ ..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|+++
T Consensus 159 ~-----~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 A-----FNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 3 46999999999999999999999999999999999999999999999865 699999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 046656 1034 LMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1034 ~l~~gg~~~~~G~~ 1047 (1326)
+|++ |+++..|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 798998875
No 463
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2e-33 Score=319.30 Aligned_cols=207 Identities=21% Similarity=0.245 Sum_probs=169.6
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCC--CCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDV--HIG 211 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 211 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc-ccccccccC
Q 046656 212 EMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD-VCADTLVGD 290 (1326)
Q Consensus 212 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 290 (1326)
.+||.|++.+..+...... . .+....++.+++.+||. ...+.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 145 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------P------------------------EQREKQIIETLRQVGLLPDHASY---- 145 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCCChHHHhc----
Confidence 8899999988644321000 0 00112356778999994 44443
Q ss_pred ccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEe
Q 046656 291 EMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILL 370 (1326)
Q Consensus 291 ~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 370 (1326)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..+||++++|
T Consensus 146 -~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 146 -YPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred -CchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 34579999999999999999999999999999999999999999999998653 3566777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 046656 371 SDGQIVYQGPCELVL 385 (1326)
Q Consensus 371 ~~G~iv~~G~~~~~~ 385 (1326)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 464
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5e-34 Score=319.41 Aligned_cols=196 Identities=30% Similarity=0.426 Sum_probs=154.4
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVT 911 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~T 911 (1326)
+.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 459999999999999999999999999999999999876 468999999987532 223456999999987776 69
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSL-------VGLPGESGLSTEQRKRLTIAVELVANPSIIF 984 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------vg~~~~~~LSgGqrqrl~ia~aL~~~p~ill 984 (1326)
++|++.+.... ...+ .+++.++..++.+..+.+ .. .....||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999874311 1111 122333333332221111 11 1135699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 985 MDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 985 LDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|++ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999986 44 47999999986 688998874
No 465
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-33 Score=310.63 Aligned_cols=210 Identities=24% Similarity=0.303 Sum_probs=166.2
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEc--Cc-
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITIS--GY- 886 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~- 886 (1326)
++++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 467788776642100 0012469999999999999999999999999999999999876 458999998 42
Q ss_pred -cCCc---cc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcc-cccccccCC
Q 046656 887 -PKKQ---ET----FTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKP-LRQSLVGLP 957 (1326)
Q Consensus 887 -~~~~---~~----~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~ 957 (1326)
+... .. .++.+||++|+..+++.+||+|++.+..... ........+.+.++++.+++.+ +.+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 147 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP--- 147 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc---
Confidence 3221 11 1346899999998899999999998754322 2233334456888999999975 345443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEe
Q 046656 958 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMK 1036 (1326)
Q Consensus 958 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1036 (1326)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. .+.+.+|+++.+.
T Consensus 148 --~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 148 --ATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 469999999999999999999999999999999999999999999998877999999999964 4556899998764
No 466
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.7e-33 Score=317.08 Aligned_cols=208 Identities=25% Similarity=0.359 Sum_probs=168.7
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCcc-----CCCCCc-------cceEEEE
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHD-----MNEFVP-------QRTAAYI 203 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv 203 (1326)
.+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|+
T Consensus 18 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v 94 (258)
T PRK11701 18 PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFV 94 (258)
T ss_pred CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEE
Confidence 346999999999999999999999999999999999999987 9999999987 554321 2369999
Q ss_pred ccCC--CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCc
Q 046656 204 SQHD--VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLD 281 (1326)
Q Consensus 204 ~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~ 281 (1326)
+|++ .+.+.+|+.||+.+.....+. ..+ .+....++++++.+|+.
T Consensus 95 ~q~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~ 141 (258)
T PRK11701 95 HQHPRDGLRMQVSAGGNIGERLMAVGA-RHY--------------------------------GDIRATAGDWLERVEID 141 (258)
T ss_pred eeCcccccCccccHHHHHHHHHHHhcc-CcH--------------------------------HHHHHHHHHHHHHcCCC
Confidence 9986 356778999999764321100 000 00112346678889986
Q ss_pred c-cccccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhH
Q 046656 282 V-CADTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPET 360 (1326)
Q Consensus 282 ~-~~dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 360 (1326)
. ..+ ..+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.++++... .+.+|+.++|+..++
T Consensus 142 ~~~~~-----~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~ 215 (258)
T PRK11701 142 AARID-----DLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVA 215 (258)
T ss_pred hhHHh-----CCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 3 344 345679999999999999999999999999999999999999999999987653 356777789999999
Q ss_pred HhhCCeEEEecCCeEEEEcChhhHH
Q 046656 361 YDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 361 ~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 216 RLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 467
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=315.48 Aligned_cols=212 Identities=19% Similarity=0.241 Sum_probs=167.2
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.
T Consensus 16 ~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (251)
T PRK14249 16 KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPN 95 (251)
T ss_pred CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCc
Confidence 3569999999999999999999999999999999999998741 1269999999876432 12467999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++. ||+||+.++....+...+ + +.....+.+++.+||.+.....
T Consensus 96 ~~~~-tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~l~~~- 140 (251)
T PRK14249 96 PFPK-SIFDNVAFGPRMLGTTAQ-----S----------------------------RLDEVVEKSLRQAALWDEVKDN- 140 (251)
T ss_pred cCcC-cHHHHHhhHHHhcCCChh-----h----------------------------HHHHHHHHHHHHhCCchhhhhH-
Confidence 8875 999999986543221000 0 0011234456666664321111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
.+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+..++.++||+++
T Consensus 141 ~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tilivsh~~~~~~~~~d~i~ 217 (251)
T PRK14249 141 LHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--Q-NYTIAIVTHNMQQAARASDWTG 217 (251)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHhhCCEEE
Confidence 234567899999999999999999999999999999999999999999999873 2 4567778999999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|++++.|+++++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 218 FLLTGDLVEYGRTGEIF 234 (251)
T ss_pred EEeCCeEEEeCCHHHHH
Confidence 99999999999988773
No 468
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-34 Score=317.38 Aligned_cols=211 Identities=25% Similarity=0.390 Sum_probs=165.0
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 367888887653 12359999999999999999999999999999999999876 4589999999875
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLV-G-----LPGE 959 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v-g-----~~~~ 959 (1326)
.. ..+++.++|++|+..+++. |++||+.+... ... ...+++.++.+++.+..+... | ....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999877765 99999976421 111 122444555555543333221 0 0113
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCc
Q 046656 960 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1039 (1326)
Q Consensus 960 ~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1039 (1326)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999986 5899999999986 34 56999999985 6
Q ss_pred EEEEEcCC
Q 046656 1040 QEIYVGPL 1047 (1326)
Q Consensus 1040 ~~~~~G~~ 1047 (1326)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887764
No 469
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.1e-34 Score=366.09 Aligned_cols=210 Identities=27% Similarity=0.415 Sum_probs=174.2
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.++|+||+|+|+.. +++.+|+|+|++|+|||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQ--PTGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCEEH
Confidence 58999999988521 12469999999999999999999999999999999999887 4589999999986
Q ss_pred Cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 046656 889 KQ---ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL-------RQSLVGLPG 958 (1326)
Q Consensus 889 ~~---~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~ 958 (1326)
++ ..+++.++||+|++.++. .|++|||.++. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~- 614 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK- 614 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC-
Confidence 53 446778999999998875 69999998752 1222 3347788888887654 34556543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 959 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 959 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+.+||||||||++|||||+++|+||+||||||+||++++..+++ .. ..+++|+|++||+++ ..+.+|+|++|++
T Consensus 615 G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 615 GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999988 22 235899999999975 5678999999985
Q ss_pred cEEEEEcCC
Q 046656 1039 GQEIYVGPL 1047 (1326)
Q Consensus 1039 g~~~~~G~~ 1047 (1326)
|+++..|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 799999985
No 470
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.7e-33 Score=354.12 Aligned_cols=209 Identities=29% Similarity=0.439 Sum_probs=169.7
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 212 (1326)
++++|+|+|+.++|||.++|+||||||||||++.|.|.++|+ +|+|.+||.++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 457999999999999999999999999999999999999997 9999999999887654 578999999887776
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||+|||.++..-- . .+++.+..+.++ ....+. .++++.||.|| +.
T Consensus 417 ~TI~~NI~~g~~~a---t----~eei~~a~k~a~------------------------~~d~I~--~lp~g~dt~vg-e~ 462 (567)
T COG1132 417 GTIRENIALGRPDA---T----DEEIEEALKLAN------------------------AHEFIA--NLPDGYDTIVG-ER 462 (567)
T ss_pred ccHHHHHhcCCCCC---C----HHHHHHHHHHhC------------------------hHHHHH--hCcccccceec-CC
Confidence 89999999974210 0 011111111100 112222 35778899999 45
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
...||||||||++||||++.+|+||+||||||+||+.+...|.+.++++. .++|+++ +.|..+.+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 66899999999999999999999999999999999999999999999764 2456666 7777755555 999999999
Q ss_pred CeEEEEcChhhHHH
Q 046656 373 GQIVYQGPCELVLD 386 (1326)
Q Consensus 373 G~iv~~G~~~~~~~ 386 (1326)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999874
No 471
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.6e-33 Score=314.60 Aligned_cols=198 Identities=24% Similarity=0.317 Sum_probs=166.6
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
-++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 377888887763 2469999999999999999999999999999999999876 45899999872
Q ss_pred CcccccceEEEeecCCCCCCC--CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 046656 889 KQETFTRISGYCEQNDIHSPL--VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQ 966 (1326)
Q Consensus 889 ~~~~~~~~~gyv~Q~~~~~~~--~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGq 966 (1326)
..++|++|++.+++. .|+.+++.+. .... ++.+.++++.+++.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877665 4777776431 1111 234788999999988777765 3599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEc
Q 046656 967 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1045 (1326)
Q Consensus 967 rqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G 1045 (1326)
|||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|+ + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999986 5778899999995 4 588888
Q ss_pred CC
Q 046656 1046 PL 1047 (1326)
Q Consensus 1046 ~~ 1047 (1326)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 472
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3e-33 Score=348.06 Aligned_cols=214 Identities=23% Similarity=0.271 Sum_probs=174.5
Q ss_pred EEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcC-----
Q 046656 811 TFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISG----- 885 (1326)
Q Consensus 811 ~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g----- 885 (1326)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 4677776652 3469999999999999999999999999999999999852014589999972
Q ss_pred ------------------ccCC----------c---ccccceEEEeecC-CCCCCCCCHHHHHHHHHHhhccCCCCHHHH
Q 046656 886 ------------------YPKK----------Q---ETFTRISGYCEQN-DIHSPLVTVYESLLYSAWLRLRTEVDSETR 933 (1326)
Q Consensus 886 ------------------~~~~----------~---~~~~~~~gyv~Q~-~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~ 933 (1326)
.++. . ...++.+||++|+ +.+++.+||+|++.|..... ..+.++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 1110 0 1134568999997 67788899999998865322 1233444
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCC
Q 046656 934 KMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVE-TGR 1012 (1326)
Q Consensus 934 ~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~ 1012 (1326)
++++.++++.++|.+..++.++ .|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+++++ .|+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIAR-----DLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 5678999999999887777653 6999999999999999999999999999999999999999999999865 489
Q ss_pred EEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 1013 TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1013 tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|||++||++. .+.+.||++++|++ |++++.|+.
T Consensus 221 tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 221 SMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred EEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 9999999986 56778999999986 688888875
No 473
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=330.41 Aligned_cols=191 Identities=23% Similarity=0.301 Sum_probs=161.8
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCCCCCCHHH
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHSPLVTVYE 914 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~~Tv~E 914 (1326)
+.+|+|+||+|++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999876 4589999999641 1222334566789999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 046656 915 SLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 994 (1326)
Q Consensus 915 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~ 994 (1326)
++.+..... ..+..+..+.++++++.+++.+..++.++ .||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~~-----~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPVK-----TYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCcc-----cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754332 22334444567889999999887777653 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 995 RAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 995 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~ 227 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDI 227 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999998877999999999986 57788999999985 799999975
No 474
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.68 Aligned_cols=210 Identities=22% Similarity=0.309 Sum_probs=164.3
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.
T Consensus 25 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 104 (269)
T PRK14259 25 TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPN 104 (269)
T ss_pred CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCc
Confidence 3469999999999999999999999999999999999986310 1289999999876421 12356999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.+++...+... + ....++.+++.+++.......
T Consensus 105 l~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~- 147 (269)
T PRK14259 105 PFP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDK- 147 (269)
T ss_pred cch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhh-
Confidence 787 599999998754322100 0 001134456666653211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.++||+++
T Consensus 148 ~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~ 224 (269)
T PRK14259 148 LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTA 224 (269)
T ss_pred hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEE
Confidence 1345668999999999999999999999999999999999999999999998742 3567778899999999999999
Q ss_pred EecC-----------CeEEEEcChhhHH
Q 046656 369 LLSD-----------GQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~-----------G~iv~~G~~~~~~ 385 (1326)
+|++ |++++.|+++++.
T Consensus 225 ~l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 225 FFNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EEeccccccccccccceEEEeCCHHHHH
Confidence 9996 6789999998874
No 475
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=315.41 Aligned_cols=212 Identities=22% Similarity=0.321 Sum_probs=166.1
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCC-C---CccceEEEEccCCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNE-F---VPQRTAAYISQHDV 208 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~ 208 (1326)
+++++|+|+|+.+++||+++|+||||||||||+++|+|..+|. ...+|+|.++|.++.. . ..++.++|++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 3456999999999999999999999999999999999998752 0138999999987642 1 12457999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.++....+...+ + .....++..++.+|+.+......
T Consensus 94 ~~~-~tv~~~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~l~~~~~~~~ 139 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQGIKDK-----K----------------------------VLDEVVERSLRGAALWDEVKDRL 139 (249)
T ss_pred cCc-ccHHHHHHhHHHhcCCCch-----H----------------------------HHHHHHHHHHHHcCCchhhhHHh
Confidence 887 8999999886432211000 0 00112344566667643211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+.||+++
T Consensus 140 -~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~ 215 (249)
T PRK14253 140 -KSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTA 215 (249)
T ss_pred -hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEE
Confidence 245668999999999999999999999999999999999999999999999753 3 566778888889999999999
Q ss_pred EecCCeEEEEcChhhH
Q 046656 369 LLSDGQIVYQGPCELV 384 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~ 384 (1326)
+|++|+++..|+.+++
T Consensus 216 ~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 216 FFLMGELVEHDDTQVI 231 (249)
T ss_pred EEECCEEEEeCCHHHH
Confidence 9999999999998766
No 476
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-33 Score=308.60 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=152.8
Q ss_pred CceEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCc
Q 046656 807 PYSLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGY 886 (1326)
Q Consensus 807 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 886 (1326)
|..+-.+||+|.++ +.++++++++|-|.--..++|+||||.||||||++|.|.+.+ ..|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 44677889998875 346799999999999999999999999999999999998773 46765422
Q ss_pred cCCcccccceEEEeecCC--CCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 887 PKKQETFTRISGYCEQND--IHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 887 ~~~~~~~~~~~gyv~Q~~--~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.+-.+|+..|+. .+...-|+-|.|.-. .+++-+ .....|-.+||...++++- ...|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~------FNlpyq----~ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK------FNLPYQ----EARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh------cCCChH----HHHHHhhhhhhhhccceEe----eeecCC
Confidence 223578887753 344455777766421 133322 2456788899988887753 356999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
|||-||++|---++.|+||||||||++||.++...+-+.|++. ...||+++||-.. +.+--..+.++.+.|.--..
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999876 4579999999763 44444577788776654455
Q ss_pred cCC
Q 046656 1045 GPL 1047 (1326)
Q Consensus 1045 G~~ 1047 (1326)
|+.
T Consensus 784 GdF 786 (807)
T KOG0066|consen 784 GDF 786 (807)
T ss_pred ccH
Confidence 543
No 477
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.7e-33 Score=314.26 Aligned_cols=210 Identities=22% Similarity=0.265 Sum_probs=167.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC-ceeeEEEECCccCCCCCc-cceEEEEccCCC--CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL-KVSGRVTYNGHDMNEFVP-QRTAAYISQHDV--HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~ 212 (1326)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 358999999999999999999999999999999999998710 028999999988753322 257999999864 4466
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.|+.+++.+.++..+.. . ....++.+++.+||.+.. +. -+..
T Consensus 96 ~~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~-~~-~~~~ 137 (254)
T PRK10418 96 HTMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAA-RV-LKLY 137 (254)
T ss_pred ccHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChh-hh-hhcC
Confidence 79999987643322110 0 002245678889987521 01 1244
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|++
T Consensus 138 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~~ 216 (254)
T PRK10418 138 PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMSH 216 (254)
T ss_pred CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEEC
Confidence 5679999999999999999999999999999999999999999999998653 356677788999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|++++.|+.+++.
T Consensus 217 G~i~~~~~~~~~~ 229 (254)
T PRK10418 217 GRIVEQGDVETLF 229 (254)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 478
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.5e-33 Score=300.07 Aligned_cols=159 Identities=25% Similarity=0.435 Sum_probs=141.8
Q ss_pred eeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcc----cccceEEEeecCC---CCCCC
Q 046656 837 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQE----TFTRISGYCEQND---IHSPL 909 (1326)
Q Consensus 837 vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~ 909 (1326)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999876 4589999999876432 2356799999984 56788
Q ss_pred CCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 046656 910 VTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 989 (1326)
Q Consensus 910 ~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPt 989 (1326)
+|++||+.+... ||+|||||++|||||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999876321 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecC
Q 046656 990 SGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRG 1038 (1326)
Q Consensus 990 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1038 (1326)
+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 999999999999999998777899999999986 677889999999864
No 479
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=316.25 Aligned_cols=214 Identities=20% Similarity=0.245 Sum_probs=170.7
Q ss_pred cccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEc
Q 046656 132 TKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYIS 204 (1326)
Q Consensus 132 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~ 204 (1326)
.+++++++|+|+|+.+++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++
T Consensus 16 ~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~ 95 (261)
T PRK14263 16 IFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVF 95 (261)
T ss_pred EEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEe
Confidence 34455679999999999999999999999999999999999997610 1389999999887431 1245699999
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|++.++ .+|++||+.++....+.. . +....++++++.+||.+..
T Consensus 96 q~~~~~-~~tv~enl~~~~~~~~~~------~-----------------------------~~~~~~~~~l~~~~l~~~i 139 (261)
T PRK14263 96 QQPNPF-SMSIFDNVAFGLRLNRYK------G-----------------------------DLGDRVKHALQGAALWDEV 139 (261)
T ss_pred cCCccc-cccHHHHHHHHHhhcCch------H-----------------------------HHHHHHHHHHHHcCCchhh
Confidence 998776 699999999875432100 0 0012245667888875432
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
+... +...+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+++
T Consensus 140 ~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~~~ 215 (261)
T PRK14263 140 KDKL-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQQAIRVA 215 (261)
T ss_pred hhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhC
Confidence 2222 245678999999999999999999999999999999999999999999998742 356777889998999999
Q ss_pred CeEEEec--------CCeEEEEcChhhHH
Q 046656 365 DDIILLS--------DGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~--------~G~iv~~G~~~~~~ 385 (1326)
|+|++|+ +|++++.|+.+++.
T Consensus 216 d~v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 216 DTTAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred CEEEEEecccccccCCceEEEeCCHHHHH
Confidence 9999995 89999999988764
No 480
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=314.59 Aligned_cols=214 Identities=22% Similarity=0.309 Sum_probs=166.5
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCC--ceeeEEEECCccCCCC-----CccceEEEEccCC
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSL--KVSGRVTYNGHDMNEF-----VPQRTAAYISQHD 207 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 207 (1326)
+.+++|+|+|+.+++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14272 15 GDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKP 94 (252)
T ss_pred CCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccC
Confidence 34579999999999999999999999999999999999987631 1379999999887531 1235799999999
Q ss_pred CCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccc
Q 046656 208 VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTL 287 (1326)
Q Consensus 208 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 287 (1326)
.+++.+|++||+.++....+...+ . +.....+..++.+++.......
T Consensus 95 ~~~~~~t~~enl~~~~~~~~~~~~----~-----------------------------~~~~~~~~~l~~~~l~~~l~~~ 141 (252)
T PRK14272 95 NPFPTMSVFDNVVAGLKLAGIRDR----D-----------------------------HLMEVAERSLRGAALWDEVKDR 141 (252)
T ss_pred ccCcCCCHHHHHHHHHHhcCCCCH----H-----------------------------HHHHHHHHHHHHcCcchhhhhh
Confidence 889999999999876432211000 0 0011123344555543211000
Q ss_pred ccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeE
Q 046656 288 VGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDI 367 (1326)
Q Consensus 288 vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 367 (1326)
-+..++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.++||+|
T Consensus 142 -~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i 217 (252)
T PRK14272 142 -LKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK---VTTIIIVTHNMHQAARVSDTT 217 (252)
T ss_pred -hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEE
Confidence 1244567999999999999999999999999999999999999999999998742 366777889988999999999
Q ss_pred EEecCCeEEEEcChhhHH
Q 046656 368 ILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 368 ilL~~G~iv~~G~~~~~~ 385 (1326)
++|++|++++.|+++++.
T Consensus 218 ~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 218 SFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988774
No 481
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.06 Aligned_cols=208 Identities=18% Similarity=0.258 Sum_probs=164.1
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC-----CCCceeeEEEECCccCCCC-----CccceEEEEccC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD-----SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQH 206 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 206 (1326)
+++|+|+|+.+++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 469999999999999999999999999999999999864 34 89999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccc
Q 046656 207 DVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADT 286 (1326)
Q Consensus 207 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 286 (1326)
+.+++. ||+||+.++....+... . . .....++..++.+|+......
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR--K---S----------------------------VLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCCcchHH
Confidence 887774 99999988643211000 0 0 001123445677777421111
Q ss_pred cccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCe
Q 046656 287 LVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDD 366 (1326)
Q Consensus 287 ~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 366 (1326)
. -+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. + ++|+.++|+.+++.++||+
T Consensus 157 ~-~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~ 232 (268)
T PRK14248 157 R-LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDR 232 (268)
T ss_pred H-HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCE
Confidence 1 1345668999999999999999999999999999999999999999999999743 3 5677788888899999999
Q ss_pred EEEecCCeEEEEcChhhHH
Q 046656 367 IILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 367 vilL~~G~iv~~G~~~~~~ 385 (1326)
|++|++|++++.|+.+++.
T Consensus 233 v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 233 TAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 482
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.41 Aligned_cols=212 Identities=20% Similarity=0.299 Sum_probs=167.1
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+.+++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.
T Consensus 37 ~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~ 116 (272)
T PRK14236 37 DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPN 116 (272)
T ss_pred CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCc
Confidence 346999999999999999999999999999999999998741 01389999999887531 12467999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++. ||+||+.+.....+... + + .....++++++.+|+.....+..
T Consensus 117 l~~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~ 162 (272)
T PRK14236 117 PFPK-SIYENVVYGLRLQGINN--R---R----------------------------VLDEAVERSLRGAALWDEVKDRL 162 (272)
T ss_pred cCcc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCChhHHHHh
Confidence 8875 99999988654322100 0 0 00112455677777753211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. + .+++.++|+.+++.+.||+|+
T Consensus 163 -~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~ 238 (272)
T PRK14236 163 -HENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTA 238 (272)
T ss_pred -hCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEE
Confidence 345668999999999999999999999999999999999999999999999853 3 456668898889999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+++++.
T Consensus 239 ~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 239 FMYMGKLVEYGDTDTLF 255 (272)
T ss_pred EEECCEEEecCCHHHHh
Confidence 99999999999988763
No 483
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=320.47 Aligned_cols=217 Identities=25% Similarity=0.309 Sum_probs=173.4
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCC---CeeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 885 (1326)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578899887763 24699999999999999999999999999999999998642 14689999999
Q ss_pred ccCCc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccC---------CCC-HHHHHHHHHHHHHHcCCcc--
Q 046656 886 YPKKQ-----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRT---------EVD-SETRKMFIEEIMELVELKP-- 948 (1326)
Q Consensus 886 ~~~~~-----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~l~~-- 948 (1326)
.++.. ...++.++|++|+..+++ .||+||+.+....+... ... .....+.++++++.+++.+
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87642 123567999999988777 59999999864321100 011 1223456888999998843
Q ss_pred --cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHH
Q 046656 949 --LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIF 1026 (1326)
Q Consensus 949 --~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1026 (1326)
..+.. +..||||||||++|||||+++|+||||||||+|||+.++..+++.|+++++ +.|||++||+++ .+.
T Consensus 191 ~~~~~~~-----~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~ 263 (305)
T PRK14264 191 NDRLDDN-----ALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAA 263 (305)
T ss_pred hHHhcCc-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHH
Confidence 23333 246999999999999999999999999999999999999999999999876 589999999986 567
Q ss_pred HHhceee-EEecCcEEEEEcCC
Q 046656 1027 EAFDELF-LMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1027 ~~~D~v~-~l~~gg~~~~~G~~ 1047 (1326)
+.+|+++ +|++ |++++.|+.
T Consensus 264 ~~~d~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 264 RISDQTAVFLTG-GELVEYDDT 284 (305)
T ss_pred HhcCEEEEEecC-CEEEEeCCH
Confidence 8899975 5664 799999875
No 484
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-33 Score=317.11 Aligned_cols=216 Identities=28% Similarity=0.391 Sum_probs=170.8
Q ss_pred cccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC-----CceeeEEEECCccCCCCCc---cceEEEEcc
Q 046656 134 KKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS-----LKVSGRVTYNGHDMNEFVP---QRTAAYISQ 205 (1326)
Q Consensus 134 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 205 (1326)
++.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q 90 (272)
T PRK13547 11 RRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQ 90 (272)
T ss_pred ECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecc
Confidence 34457999999999999999999999999999999999999874 1137999999988754322 346899999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
++..++.+||+||+.++...... .... .. .+....++.+++.+||+...+
T Consensus 91 ~~~~~~~~tv~e~l~~~~~~~~~--~~~~---~~-------------------------~~~~~~~~~~l~~~~l~~~~~ 140 (272)
T PRK13547 91 AAQPAFAFSAREIVLLGRYPHAR--RAGA---LT-------------------------HRDGEIAWQALALAGATALVG 140 (272)
T ss_pred cCCCCCCCcHHHHHhhccccccc--cccc---CC-------------------------HHHHHHHHHHHHHcCcHhhhc
Confidence 97766779999999885321000 0000 00 001123566788999976554
Q ss_pred ccccCccccCCChhhhHHHHHHHHhh---------cCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMV---------GPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQP 356 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~---------~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~ 356 (1326)
..+..|||||||||+||++|+ .+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+
T Consensus 141 -----~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tviiisH~ 214 (272)
T PRK13547 141 -----RDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WNLGVLAIVHD 214 (272)
T ss_pred -----CCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECC
Confidence 345679999999999999999 599999999999999999999999999997653 24566678888
Q ss_pred hhhHHhhCCeEEEecCCeEEEEcChhhHH
Q 046656 357 APETYDLFDDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 357 ~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 385 (1326)
..++.++||++++|++|++++.|+.+++.
T Consensus 215 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 215 PNLAARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHHHHhCCEEEEEECCeEEEecCHHHHc
Confidence 88999999999999999999999987763
No 485
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-33 Score=304.43 Aligned_cols=194 Identities=24% Similarity=0.311 Sum_probs=161.9
Q ss_pred EEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCC
Q 046656 810 LTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKK 889 (1326)
Q Consensus 810 l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 889 (1326)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 45677776652 2469999999999999999999999999999999999876 46899999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 046656 890 Q--ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQR 967 (1326)
Q Consensus 890 ~--~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqr 967 (1326)
. ..+++.++|++|+..+++..||+||+.+.... . .. ...++++++.+++.+..+..++ .||+|||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPCG-----LLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCChh-----hcCHHHH
Confidence 2 23456799999998888889999999886421 1 11 2357899999999876666553 5999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceee
Q 046656 968 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELF 1033 (1326)
Q Consensus 968 qrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~ 1033 (1326)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ....+|...
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999975 345566543
No 486
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=314.43 Aligned_cols=212 Identities=20% Similarity=0.327 Sum_probs=166.5
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+.+++||+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.
T Consensus 16 ~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14251 16 NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPT 95 (251)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCc
Confidence 3569999999999999999999999999999999999986 2111389999999886431 12456999999987
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.++....+.... + .....++.+++.+|+.......
T Consensus 96 ~~~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~- 140 (251)
T PRK14251 96 PFP-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDN- 140 (251)
T ss_pred cCC-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHH-
Confidence 775 7999999886432211000 0 0012245567778884321100
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|+|+
T Consensus 141 ~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~ 217 (251)
T PRK14251 141 LDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHNLQQAGRISDQTA 217 (251)
T ss_pred hccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECCHHHHHhhcCEEE
Confidence 1245668999999999999999999999999999999999999999999998742 3567778899999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+.+++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 218 FLMNGDLIEAGPTEEMF 234 (251)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988763
No 487
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=314.31 Aligned_cols=212 Identities=21% Similarity=0.280 Sum_probs=166.4
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|.++... ..++.++|++|++.
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 97 (253)
T PRK14261 18 EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPN 97 (253)
T ss_pred CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCc
Confidence 456999999999999999999999999999999999987531 11389999999887542 12356999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.|+.+..+... . .+....++.+++.+++.+...+.
T Consensus 98 ~~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~- 142 (253)
T PRK14261 98 PFP-KSIYENVAYGPRIHGEKN---------K------------------------KTLDTIVEKSLKGAALWDEVKDR- 142 (253)
T ss_pred cCc-ccHHHHHHhhHHhcCCCC---------H------------------------HHHHHHHHHHHHHhcCchhhHHH-
Confidence 887 499999998754322100 0 00011234456667764321111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..++.||||||||++||++++.+|++++|||||+|||+.++..+.+.++++.. + .+++.++|+.+++.+.+|+++
T Consensus 143 ~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~ 219 (253)
T PRK14261 143 LHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTG 219 (253)
T ss_pred hhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEE
Confidence 1345668999999999999999999999999999999999999999999998753 3 566778899889999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|+.+++.
T Consensus 220 ~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 220 FMYLGKLIEFDKTTQIF 236 (253)
T ss_pred EEECCEEEEcCCHHHHH
Confidence 99999999999988763
No 488
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.2e-33 Score=345.67 Aligned_cols=221 Identities=21% Similarity=0.266 Sum_probs=179.1
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCC---eeEEEEEEcC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGNITISG 885 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 885 (1326)
-++++|+++.++.. ...+.+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 37788888876411 01246999999999999999999999999999999999987631 2589999999
Q ss_pred ccCCcc------cc-cceEEEeecCCC--CCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccc---cccc
Q 046656 886 YPKKQE------TF-TRISGYCEQNDI--HSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPL---RQSL 953 (1326)
Q Consensus 886 ~~~~~~------~~-~~~~gyv~Q~~~--~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~ 953 (1326)
.++... .. ++.+||++|+.. +.+.+|+.|++.+..... ...+..+.+++++++++.++|.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLH--RGMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876431 11 246899999964 567789999987643221 123344456678999999999763 4555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHHhcee
Q 046656 954 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVET-GRTVVCTIHQPSIDIFEAFDEL 1032 (1326)
Q Consensus 954 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1032 (1326)
+ ..|||||||||+|||||+.+|++|||||||+|||+.++..+++.|++++++ |.|||++||++. .+...+|++
T Consensus 154 ~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 P-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred C-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 4 369999999999999999999999999999999999999999999998765 899999999986 567789999
Q ss_pred eEEecCcEEEEEcCC
Q 046656 1033 FLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 1033 ~~l~~gg~~~~~G~~ 1047 (1326)
++|++ |++++.|+.
T Consensus 228 ~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 228 AVMQN-GRCVEQNRA 241 (529)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99996 789988875
No 489
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-33 Score=360.97 Aligned_cols=205 Identities=28% Similarity=0.384 Sum_probs=165.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCc---cceEEEEccCCCCCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVP---QRTAAYISQHDVHIGEM 213 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 213 (1326)
+++|+|+|++++|||.++|+||||||||||+|+|+|+++|+ +|+|.+||.++++..+ ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 46999999999999999999999999999999999999998 9999999999887654 47899999998876 56
Q ss_pred CHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCccc
Q 046656 214 TVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEMV 293 (1326)
Q Consensus 214 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 293 (1326)
|++|||.++.. . .. .++.+..+.+++ ++.++ .+++..||.+|+. .
T Consensus 542 TI~eNi~~~~~-~---~~----e~i~~al~~a~l------------------------~~~i~--~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---TL----DEAWEAARMAGL------------------------AEDIR--AMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC-C---CH----HHHHHHHHHcCc------------------------HHHHH--hccccccccccCC-C
Confidence 99999998632 0 00 111111111111 11111 2566789999965 5
Q ss_pred cCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecCC
Q 046656 294 RGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDG 373 (1326)
Q Consensus 294 ~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 373 (1326)
.+||||||||++||||++.+|++++||||||+||+.+..++.+.|+++ ++ |+++++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecCh-HHHHcCCEEEEEECC
Confidence 689999999999999999999999999999999999999999999874 34 445566665 456779999999999
Q ss_pred eEEEEcChhhHHH
Q 046656 374 QIVYQGPCELVLD 386 (1326)
Q Consensus 374 ~iv~~G~~~~~~~ 386 (1326)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998863
No 490
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=313.93 Aligned_cols=213 Identities=22% Similarity=0.277 Sum_probs=169.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCC--CceeeEEEECCccCCCC-----CccceEEEEccCCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSS--LKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDVH 209 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 209 (1326)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++... ..++.++|++|+..+
T Consensus 20 ~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l 99 (261)
T PRK14258 20 QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNL 99 (261)
T ss_pred eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCcc
Confidence 46899999999999999999999999999999999999874 12479999999876321 124569999999887
Q ss_pred CCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccccccc
Q 046656 210 IGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVG 289 (1326)
Q Consensus 210 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 289 (1326)
++ +||+||+.+.....+... .. +....+..+++.+|+.+..+.. -
T Consensus 100 ~~-~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~-~ 144 (261)
T PRK14258 100 FP-MSVYDNVAYGVKIVGWRP---------KL------------------------EIDDIVESALKDADLWDEIKHK-I 144 (261)
T ss_pred Cc-ccHHHHHHHHHHhcCCCc---------HH------------------------HHHHHHHHHHHHcCCcchhhhH-h
Confidence 77 899999988643221100 00 0112345677888875422211 1
Q ss_pred CccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEE
Q 046656 290 DEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIIL 369 (1326)
Q Consensus 290 ~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 369 (1326)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.++||+|++
T Consensus 145 ~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~-~~~tiiivsH~~~~i~~~~d~i~~ 223 (261)
T PRK14258 145 HKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLR-SELTMVIVSHNLHQVSRLSDFTAF 223 (261)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHhcCEEEE
Confidence 3456689999999999999999999999999999999999999999999987543 345666788999999999999999
Q ss_pred ecC-----CeEEEEcChhhHH
Q 046656 370 LSD-----GQIVYQGPCELVL 385 (1326)
Q Consensus 370 L~~-----G~iv~~G~~~~~~ 385 (1326)
|++ |+++++|+++++.
T Consensus 224 l~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 224 FKGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred EccCCCcCceEEEeCCHHHHH
Confidence 999 9999999999874
No 491
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-33 Score=312.18 Aligned_cols=212 Identities=18% Similarity=0.277 Sum_probs=164.2
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEccCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQHDV 208 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 208 (1326)
.+++|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (252)
T PRK14255 17 KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPN 96 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCc
Confidence 3569999999999999999999999999999999999865 3211389999999877421 12357999999988
Q ss_pred CCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccc
Q 046656 209 HIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLV 288 (1326)
Q Consensus 209 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 288 (1326)
+++ .||+||+.+.....+.... +. ....+...++.+|+.......
T Consensus 97 ~~~-~tv~~nl~~~~~~~~~~~~-----~~----------------------------~~~~~~~~l~~~~l~~~i~~~- 141 (252)
T PRK14255 97 PFP-FSIYENVIYGLRLAGVKDK-----AV----------------------------LDEAVETSLKQAAIWDEVKDH- 141 (252)
T ss_pred cCC-CcHHHHHHHHHHHcCCCCH-----HH----------------------------HHHHHHHHHHHcCCccchhhH-
Confidence 787 7999999986543221100 00 001123445566653211111
Q ss_pred cCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEE
Q 046656 289 GDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDII 368 (1326)
Q Consensus 289 g~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 368 (1326)
-+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .++++++|+..++.+.+|+|+
T Consensus 142 ~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~ 218 (252)
T PRK14255 142 LHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTA 218 (252)
T ss_pred HhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEE
Confidence 1244568999999999999999999999999999999999999999999999753 3 566668899999999999999
Q ss_pred EecCCeEEEEcChhhHH
Q 046656 369 LLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 369 lL~~G~iv~~G~~~~~~ 385 (1326)
+|++|+++..|++.++.
T Consensus 219 ~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 219 FFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988763
No 492
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-33 Score=316.07 Aligned_cols=205 Identities=21% Similarity=0.271 Sum_probs=169.5
Q ss_pred ceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCC---ccceEEEEccCCC-CCCC
Q 046656 137 LTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFV---PQRTAAYISQHDV-HIGE 212 (1326)
Q Consensus 137 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 212 (1326)
..+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999998875422 2457999999963 6778
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
.||.||+.++....+.. +. +....++.+++.+||....++ .
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~ 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------RE------------------------EMIKRVDEALLAVNMLDFKTR-----E 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhC-----C
Confidence 89999998864321110 00 011235677888999876554 4
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.+++++.. .+++|+.++|+.+++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 5679999999999999999999999999999999999999999999988653 2556666888888876 6999999999
Q ss_pred CeEEEEcChhhHH
Q 046656 373 GQIVYQGPCELVL 385 (1326)
Q Consensus 373 G~iv~~G~~~~~~ 385 (1326)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998874
No 493
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=287.92 Aligned_cols=217 Identities=25% Similarity=0.371 Sum_probs=185.6
Q ss_pred hhcccccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc---ceEEEEc
Q 046656 128 HILTTKKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ---RTAAYIS 204 (1326)
Q Consensus 128 ~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~ 204 (1326)
.++++.++++.+|+|+|..+++|.+|+++|||||||||||.+++.+++.+ +|+|+++|.++.....+ +.++..-
T Consensus 5 ~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILk 81 (252)
T COG4604 5 ENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILK 81 (252)
T ss_pred hhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHH
Confidence 34567778899999999999999999999999999999999999999988 99999999998766543 5678888
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|+...--.+||+|-+.|+.--..-| | +. .+....+++.++.++|++..
T Consensus 82 Q~N~i~~rlTV~dLv~FGRfPYSqG-R------lt-------------------------~eD~~~I~~aieyl~L~~l~ 129 (252)
T COG4604 82 QENHINSRLTVRDLVGFGRFPYSQG-R------LT-------------------------KEDRRIINEAIEYLHLEDLS 129 (252)
T ss_pred hhchhhheeEHHHHhhcCCCcccCC-C------Cc-------------------------hHHHHHHHHHHHHhcccchH
Confidence 9877778899999999974321111 0 00 11234577889999998877
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
| ++...||||||||.-||..++.+.+.++||||.+.||-..+.++++.|+++++..++|+|+ +.|+-..+..++
T Consensus 130 d-----ryLd~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~Ys 203 (252)
T COG4604 130 D-----RYLDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYS 203 (252)
T ss_pred H-----HhHHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhh
Confidence 6 5566899999999999999999999999999999999999999999999999988777666 678888888999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|+|+-|++|+++.+|+++++.
T Consensus 204 D~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 204 DHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred hheeeecCCEEEecCCHHHhc
Confidence 999999999999999999986
No 494
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=318.08 Aligned_cols=210 Identities=19% Similarity=0.327 Sum_probs=165.5
Q ss_pred ccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--C---CCceeeEEEECCccCCCC-----CccceEEEEc
Q 046656 135 KHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--S---SLKVSGRVTYNGHDMNEF-----VPQRTAAYIS 204 (1326)
Q Consensus 135 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~---~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~ 204 (1326)
..+.+|+|+|+.|++|++++|+|||||||||||++|+|..+ | + +|+|.++|.++... ..++.++|++
T Consensus 50 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~ 126 (286)
T PRK14275 50 GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVF 126 (286)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEEC
Confidence 34569999999999999999999999999999999999854 3 5 89999999876432 1245799999
Q ss_pred cCCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccc
Q 046656 205 QHDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCA 284 (1326)
Q Consensus 205 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 284 (1326)
|++.+++. ||+||+.++....+.... ......++.+++.+|+....
T Consensus 127 q~~~l~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l 172 (286)
T PRK14275 127 QKPNPFPK-SIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEV 172 (286)
T ss_pred CCCCCCcc-CHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccch
Confidence 99887774 999999986543211000 00111234556777764210
Q ss_pred cccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhC
Q 046656 285 DTLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLF 364 (1326)
Q Consensus 285 dt~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 364 (1326)
.. .-+..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. +.+|++++|+.+++.+++
T Consensus 173 ~~-~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~~ 248 (286)
T PRK14275 173 SD-RLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRVS 248 (286)
T ss_pred hh-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhC
Confidence 00 01245668999999999999999999999999999999999999999999998743 356777899999999999
Q ss_pred CeEEEecCCeEEEEcChhhHH
Q 046656 365 DDIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 365 D~vilL~~G~iv~~G~~~~~~ 385 (1326)
|++++|++|+++..|+.+++.
T Consensus 249 d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 249 DYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999988764
No 495
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=280.33 Aligned_cols=204 Identities=23% Similarity=0.320 Sum_probs=174.0
Q ss_pred CceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc----------------ccccce
Q 046656 833 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ----------------ETFTRI 896 (1326)
Q Consensus 833 ~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 896 (1326)
+...+|++||++.+.|+++.|+|.|||||||+|++|.-+.+ +..|.|.++|..+.. ...+..
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 44679999999999999999999999999999999998776 568999999975321 112335
Q ss_pred EEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 046656 897 SGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVEL 976 (1326)
Q Consensus 897 ~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL 976 (1326)
.|+|+|+..++..+||.||+.-... . -...++.+..++.+..|..+|+.+.+|.... .|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaPv-h-VLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAPV-H-VLGVSKAEAIERAEKYLAKVGIAEKADAYPA-----HLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcch-H-hhcCCHHHHHHHHHHHHHHhCchhhhhcCcc-----ccCchHHHHHHHHHHH
Confidence 7999999999999999999975321 1 1235667777889999999999998887653 5999999999999999
Q ss_pred hhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 977 VANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 977 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
+.+|++++.|||||.|||+-.-.+.+.+++++++|+|++++||.... .-+...++++|.+ |.+-..||+
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P 236 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPP 236 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCCh
Confidence 99999999999999999999999999999999999999999998653 3445689999986 799999987
No 496
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=314.96 Aligned_cols=215 Identities=15% Similarity=0.277 Sum_probs=164.3
Q ss_pred ccccceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccC--CCCceeeEEEECCccCCCC-----CccceEEEEcc
Q 046656 133 KKKHLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLD--SSLKVSGRVTYNGHDMNEF-----VPQRTAAYISQ 205 (1326)
Q Consensus 133 ~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q 205 (1326)
+++.+.+|+|+|+++++|++++|+|+|||||||||++|+|.++ |....+|+|.++|.++... ..++.++|++|
T Consensus 33 ~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q 112 (271)
T PRK14238 33 WYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEELRTNVGMVFQ 112 (271)
T ss_pred EECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHHhhhEEEEec
Confidence 3334569999999999999999999999999999999999986 2111389999999887421 12457999999
Q ss_pred CCCCCCCCCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCccccc
Q 046656 206 HDVHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCAD 285 (1326)
Q Consensus 206 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 285 (1326)
++.+++ .||+||+.++.+..+... + + .....++..++.+++.....
T Consensus 113 ~~~~~~-~tv~eni~~~~~~~~~~~------~--~-------------------------~~~~~~~~~l~~~~~~~~l~ 158 (271)
T PRK14238 113 KPNPFP-KSIYDNVTYGPKIHGIKD------K--K-------------------------TLDEIVEKSLRGAAIWDELK 158 (271)
T ss_pred CCcccc-ccHHHHHHHHHHhcCCCc------H--H-------------------------HHHHHHHHHHHHcCCcchHH
Confidence 988776 599999998654321100 0 0 00111233444444321111
Q ss_pred ccccCccccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCC
Q 046656 286 TLVGDEMVRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFD 365 (1326)
Q Consensus 286 t~vg~~~~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 365 (1326)
... +..+..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.. + .+|+.++|+.+++.+++|
T Consensus 159 ~~~-~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~i~~~~d 234 (271)
T PRK14238 159 DRL-HDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK--D-YSIIIVTHNMQQAARISD 234 (271)
T ss_pred HHH-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc--C-CEEEEEEcCHHHHHHhCC
Confidence 111 245668999999999999999999999999999999999999999999998743 3 567778899989999999
Q ss_pred eEEEecCCeEEEEcChhhHH
Q 046656 366 DIILLSDGQIVYQGPCELVL 385 (1326)
Q Consensus 366 ~vilL~~G~iv~~G~~~~~~ 385 (1326)
++++|++|++++.|+.+++.
T Consensus 235 ~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 235 KTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988763
No 497
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=314.82 Aligned_cols=196 Identities=26% Similarity=0.370 Sum_probs=155.6
Q ss_pred eEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCc---ccccceEEEeecCCCCCCCCC
Q 046656 835 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQ---ETFTRISGYCEQNDIHSPLVT 911 (1326)
Q Consensus 835 ~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~~T 911 (1326)
+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++ .|
T Consensus 14 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 90 (236)
T cd03253 14 RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFN-DT 90 (236)
T ss_pred CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhc-ch
Confidence 359999999999999999999999999999999999876 468999999987532 234567999999987775 69
Q ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 046656 912 VYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSL-------VGLPGESGLSTEQRKRLTIAVELVANPSIIF 984 (1326)
Q Consensus 912 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------vg~~~~~~LSgGqrqrl~ia~aL~~~p~ill 984 (1326)
++||+.+... ..... .+++.++..++.+..+.+ ... ....||+|||||++|||+|+.+|++|+
T Consensus 91 v~~nl~~~~~-----~~~~~----~~~~~~~~~~l~~~~~~l~~~~~~~~~~-~~~~LS~G~~~rl~la~aL~~~p~lll 160 (236)
T cd03253 91 IGYNIRYGRP-----DATDE----EVIEAAKAAQIHDKIMRFPDGYDTIVGE-RGLKLSGGEKQRVAIARAILKNPPILL 160 (236)
T ss_pred HHHHHhhcCC-----CCCHH----HHHHHHHHcCcHHHHHhccccccchhhc-CCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999987431 11111 133344444443322211 111 134799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCC
Q 046656 985 MDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1047 (1326)
Q Consensus 985 LDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~ 1047 (1326)
|||||+|||+.+...+.+.|+++.+ |.|||+++|+++ .+ ..+|++++|++ |++++.|+.
T Consensus 161 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~i~~~~~~ 219 (236)
T cd03253 161 LDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GRIVERGTH 219 (236)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999999999876 999999999986 34 45999999986 688888764
No 498
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=315.58 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=203.7
Q ss_pred eEEEecccceeccchhhhccccccCceEeeecceeEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccC
Q 046656 809 SLTFDDVTYSADMPKEMKLKGVHEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPK 888 (1326)
Q Consensus 809 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~vL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 888 (1326)
.+++++++..++ ...+++|||++|++||+.||+|.|||||||||++|.|... +.+|+|.++|++.
T Consensus 4 ~l~~~~itK~f~-------------~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v 68 (501)
T COG3845 4 ALEMRGITKRFP-------------GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEV 68 (501)
T ss_pred eEEEeccEEEcC-------------CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEe
Confidence 467778776653 4679999999999999999999999999999999999987 5699999999976
Q ss_pred Cc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 046656 889 KQ----ETFTRISGYCEQNDIHSPLVTVYESLLYSAWLRLRTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLST 964 (1326)
Q Consensus 889 ~~----~~~~~~~gyv~Q~~~~~~~~Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSg 964 (1326)
.- ...+.-+|.|.|+..+.+++||.||+..+..-......+.+...++++++.+..||.--.|..++ .||.
T Consensus 69 ~~~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~-----dLsV 143 (501)
T COG3845 69 RIKSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVA-----DLSV 143 (501)
T ss_pred ccCCHHHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceee-----cCCc
Confidence 42 22345689999999999999999999987543222344566677789999999999877788875 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEE
Q 046656 965 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1044 (1326)
Q Consensus 965 Gqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1044 (1326)
||||||.|-++|.++|++|||||||+-|-|.....+++++++++++|+|||++||... |+.+.+||+-+|.+ |+++-.
T Consensus 144 G~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt 221 (501)
T COG3845 144 GEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGT 221 (501)
T ss_pred chhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999999999999999999997 89999999999986 677655
Q ss_pred cC-CCC-ChhhHHHHHhhcCcchhhHHhhhccCcccccCCCCccceEEEecc
Q 046656 1045 GP-LGS-NSSDLISYLQLMPMHVTFIFMKAISGVEKIKDGYNPATWMLEVTS 1094 (1326)
Q Consensus 1045 G~-~~~-~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~v~~ 1094 (1326)
-+ ..+ ..+++.+--- |..+. .+.-.+...|.++.|+|-+
T Consensus 222 ~~~~~~~t~~ela~lMv--G~~v~---------~~~~~~~~~pg~~vL~V~~ 262 (501)
T COG3845 222 VDPVAETTEEELAELMV--GREVV---------LRVVKPPSTPGEVVLEVED 262 (501)
T ss_pred ecCCCCCCHHHHHHHhc--CCccc---------cccccCCCCCCCeEEEEee
Confidence 54 333 2233332211 22110 0111345678899999865
No 499
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=5.8e-33 Score=307.14 Aligned_cols=194 Identities=24% Similarity=0.347 Sum_probs=160.3
Q ss_pred eEEeCCeEEEEeccCCCChhhHHhhhcCCCCCCeeEEEEEEcCccCCcccccceEEEeecCCCCC--CCCCHHHHHHHHH
Q 046656 843 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGNITISGYPKKQETFTRISGYCEQNDIHS--PLVTVYESLLYSA 920 (1326)
Q Consensus 843 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~~Tv~E~l~f~~ 920 (1326)
++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+. ..+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4689999999999999999999999999876 458999999987532 346789999998664 3479999998753
Q ss_pred Hhhc-cCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 046656 921 WLRL-RTEVDSETRKMFIEEIMELVELKPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 999 (1326)
Q Consensus 921 ~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPtsgLD~~~~~~ 999 (1326)
.... .........++.+.++++.+++.+..++.++ .||+|||||++|||+|+.+|++|+|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPVG-----ELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 2110 0001112234568899999999887777654 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEEecCCcHHHHHHhceeeEEecCcEEEEEcCCC
Q 046656 1000 VMRTVKNTVETGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1048 (1326)
Q Consensus 1000 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~G~~~ 1048 (1326)
+.+.|+++.++|+|||++||+++ ++.+.+|+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999998877999999999986 577889999999 5 7999999863
No 500
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4e-33 Score=317.91 Aligned_cols=212 Identities=28% Similarity=0.433 Sum_probs=172.2
Q ss_pred cceeecceeEEEeCceEEEEecCCCCChhHHHHHHhcccCCCCceeeEEEECCccCCCCCcc---ceEEEEccCCCCCCC
Q 046656 136 HLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGQLDSSLKVSGRVTYNGHDMNEFVPQ---RTAAYISQHDVHIGE 212 (1326)
Q Consensus 136 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 212 (1326)
++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++.+++. +.+||.||+-.+| .
T Consensus 348 ~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF-~ 423 (580)
T COG4618 348 KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELF-D 423 (580)
T ss_pred CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceec-C
Confidence 467999999999999999999999999999999999999987 99999999999887764 7899999976555 5
Q ss_pred CCHHHHHHhhhhhccCCccchhhhHhHHHHHHhCCCCchhHHHHHHHhhhhhHHHHHHHHHHHHHcCCcccccccccCcc
Q 046656 213 MTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDLFIDVFMKAAATEGQEANVLTDYYLKVLGLDVCADTLVGDEM 292 (1326)
Q Consensus 213 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~i~pd~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 292 (1326)
-||.|||. |+. +|.+.+...+++...+ ..| -++.|++.+||.||+.
T Consensus 424 GTIaeNIa---Rf~----------------------~~~d~~kIieAA~lAg-----vHe---lIl~lP~GYdT~iG~~- 469 (580)
T COG4618 424 GTIAENIA---RFG----------------------EEADPEKVIEAARLAG-----VHE---LILRLPQGYDTRIGEG- 469 (580)
T ss_pred CcHHHHHH---hcc----------------------ccCCHHHHHHHHHHcC-----hHH---HHHhCcCCccCccCCC-
Confidence 79999995 221 1111222222222111 112 2456899999999964
Q ss_pred ccCCChhhhHHHHHHHHhhcCCccceEecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecChhhHHhhCCeEEEecC
Q 046656 293 VRGISGGQKKRLTTGEMMVGPALALFMDEISNGLDSSTTFHIVNSLRQNIHILNGTAVISLLQPAPETYDLFDDIILLSD 372 (1326)
Q Consensus 293 ~~~LSGGqkqRvsia~al~~~~~illLDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 372 (1326)
..+||||||||+++|||++++|.+++||||-|.||+.....+.+.+.+... .++++|+ ++|. +.+...+|+|++|++
T Consensus 470 G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-iaHR-Ps~L~~~Dkilvl~~ 546 (580)
T COG4618 470 GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-IAHR-PSALASVDKILVLQD 546 (580)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-EecC-HHHHhhcceeeeecC
Confidence 568999999999999999999999999999999999999999999998643 4555554 4553 568899999999999
Q ss_pred CeEEEEcChhhHHHHH
Q 046656 373 GQIVYQGPCELVLDFF 388 (1326)
Q Consensus 373 G~iv~~G~~~~~~~~F 388 (1326)
|++-.+|+++|++...
T Consensus 547 G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 547 GRIAAFGPREEVLAKV 562 (580)
T ss_pred ChHHhcCCHHHHHHHh
Confidence 9999999999998654
Done!