Query 046660
Match_columns 474
No_of_seqs 238 out of 2121
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 04:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046660.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046660hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 7E-88 2.4E-92 699.9 47.1 462 3-466 39-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2.7E-85 9.4E-90 679.2 45.3 457 3-465 31-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 3.3E-82 1.1E-86 662.4 40.9 458 2-465 37-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.7E-75 9.1E-80 603.5 40.3 433 7-465 26-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 6.2E-74 2.1E-78 595.6 41.8 434 8-463 25-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 1E-69 3.4E-74 568.4 42.5 429 5-463 49-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 2.5E-69 8.7E-74 565.6 43.9 431 10-464 48-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 2.7E-69 9.1E-74 565.6 42.9 433 10-464 51-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 2.2E-69 7.5E-74 564.3 40.3 432 7-466 32-481 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.6E-66 5.5E-71 538.2 35.8 419 7-463 28-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2E-41 6.7E-46 356.6 32.8 190 7-202 58-258 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 4.5E-35 1.5E-39 306.6 33.4 197 8-210 52-259 (524)
13 3pm9_A Putative oxidoreductase 100.0 1.6E-35 5.6E-40 305.7 23.9 205 6-215 40-253 (476)
14 4feh_A Oxidoreductase DPRE1; a 100.0 2.8E-33 9.6E-38 289.1 33.1 198 7-214 33-237 (481)
15 4bby_A Alkyldihydroxyacetoneph 100.0 1.5E-33 5E-38 302.8 22.6 202 10-212 198-407 (658)
16 2vfr_A Xylitol oxidase, aldito 100.0 2.9E-31 9.8E-36 271.6 33.2 176 7-194 10-188 (422)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 3.7E-32 1.3E-36 286.8 20.6 197 14-213 134-338 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 3.4E-31 1.2E-35 277.8 23.8 199 14-217 53-268 (520)
19 1e8g_A Vanillyl-alcohol oxidas 100.0 3.5E-29 1.2E-33 264.3 25.2 200 14-217 67-300 (560)
20 3js8_A Cholesterol oxidase; ch 100.0 8.7E-30 3E-34 262.9 17.6 181 8-193 20-221 (540)
21 2i0k_A Oxidoreductase; MIX alp 100.0 9.7E-29 3.3E-33 260.5 18.8 182 7-193 25-225 (561)
22 1f0x_A DLDH, D-lactate dehydro 100.0 7.4E-29 2.5E-33 259.9 15.4 198 10-214 39-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 3.2E-26 1.1E-30 223.7 13.4 163 14-191 51-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 5.1E-25 1.7E-29 216.7 11.4 160 14-189 45-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 8.6E-25 2.9E-29 215.7 13.0 170 9-191 21-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 5E-23 1.7E-27 202.6 16.7 164 15-191 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.6E-22 5.5E-27 192.1 9.1 160 9-190 13-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 3.4E-20 1.2E-24 171.2 11.0 115 76-198 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 97.8 4.1E-05 1.4E-09 73.4 8.5 153 17-189 4-177 (287)
30 1n62_C Carbon monoxide dehydro 96.9 0.0012 4.2E-08 63.0 6.2 152 17-188 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 96.5 0.002 6.7E-08 65.6 4.7 150 20-188 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 93.1 0.12 4.1E-06 49.1 5.9 150 16-187 3-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 92.7 0.15 5.1E-06 48.9 6.0 76 17-101 9-90 (305)
34 3hrd_C Nicotinate dehydrogenas 91.8 0.16 5.6E-06 48.4 5.0 73 18-98 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 85.9 0.92 3.2E-05 43.6 5.6 74 17-99 5-84 (324)
36 4bby_A Alkyldihydroxyacetoneph 85.9 1.2 3.9E-05 47.5 6.9 29 429-457 625-654 (658)
37 1wvf_A 4-cresol dehydrogenase 85.0 0.97 3.3E-05 46.6 5.7 32 430-461 481-513 (520)
38 2uuu_A Alkyldihydroxyacetoneph 65.8 6.5 0.00022 41.0 5.4 29 429-457 551-580 (584)
39 3unc_A Xanthine dehydrogenase/ 65.4 4.5 0.00015 46.5 4.4 77 18-101 233-313 (1332)
40 2i0k_A Oxidoreductase; MIX alp 56.2 4.6 0.00016 41.9 2.2 22 437-458 533-554 (561)
41 1e8g_A Vanillyl-alcohol oxidas 49.8 16 0.00053 37.8 5.0 25 437-461 523-547 (560)
42 3js8_A Cholesterol oxidase; ch 48.0 6.4 0.00022 40.5 1.7 23 436-458 511-533 (540)
43 1f0x_A DLDH, D-lactate dehydro 44.9 11 0.00036 39.2 2.7 27 436-463 536-562 (571)
44 1xty_A PTH, peptidyl-tRNA hydr 42.1 25 0.00084 28.2 4.0 43 8-52 47-90 (120)
45 1wn2_A Peptidyl-tRNA hydrolase 39.3 54 0.0018 26.2 5.6 43 8-52 48-91 (121)
46 1rzw_A Protein AF2095(GR4); be 35.9 49 0.0017 26.6 4.8 43 8-52 41-84 (123)
47 1rlk_A Hypothetical protein TA 34.4 62 0.0021 25.6 5.2 43 8-52 44-87 (117)
48 2zv3_A PTH, peptidyl-tRNA hydr 34.4 59 0.002 25.7 5.1 43 8-52 42-85 (115)
49 3zyv_A AOH1; oxidoreductase, m 30.6 30 0.001 39.8 3.7 76 20-102 242-321 (1335)
50 2crl_A Copper chaperone for su 30.5 1E+02 0.0036 23.0 5.9 33 75-107 48-80 (98)
51 1q7s_A BIT1, protein CGI-147; 29.8 91 0.0031 24.6 5.5 42 8-51 44-86 (117)
52 2g2c_A Putative molybdenum cof 29.5 91 0.0031 26.2 5.9 39 19-57 47-85 (167)
53 1mkz_A Molybdenum cofactor bio 25.8 1.2E+02 0.004 25.7 5.9 36 20-55 47-83 (172)
54 3p04_A Uncharacterized BCR; SE 25.3 82 0.0028 23.6 4.1 35 18-75 6-40 (87)
55 3rfq_A Pterin-4-alpha-carbinol 24.0 1.3E+02 0.0045 25.8 5.9 37 20-56 68-104 (185)
56 2gvs_A Chemosensory protein CS 23.9 26 0.0009 27.5 1.2 14 443-456 84-97 (109)
57 1uuy_A CNX1, molybdopterin bio 23.2 1.4E+02 0.0049 24.9 5.9 37 20-56 49-86 (167)
58 2is8_A Molybdopterin biosynthe 22.8 1.5E+02 0.0051 24.7 5.9 36 20-55 40-76 (164)
59 2lnd_A De novo designed protei 22.7 83 0.0028 22.9 3.5 33 20-52 30-62 (112)
60 2pjk_A 178AA long hypothetical 22.6 1.4E+02 0.0047 25.5 5.7 36 20-55 59-95 (178)
61 3pzy_A MOG; ssgcid, seattle st 22.5 1.1E+02 0.0039 25.6 5.1 36 20-56 46-81 (164)
62 2nu8_A Succinyl-COA ligase [AD 22.3 97 0.0033 28.7 5.0 21 86-106 150-170 (288)
63 1yht_A DSPB; beta barrel, hydr 22.2 56 0.0019 31.6 3.4 28 25-52 92-121 (367)
64 1k19_A Chemosensory protein CS 21.1 31 0.001 27.3 1.0 14 443-456 82-95 (112)
65 2kxh_B Peptide of FAR upstream 20.7 43 0.0015 19.6 1.3 19 435-453 10-28 (31)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=7e-88 Score=699.85 Aligned_cols=462 Identities=56% Similarity=1.012 Sum_probs=400.6
Q ss_pred cccccccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCC
Q 046660 3 FTIQNFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEE 82 (474)
Q Consensus 3 ~~~~~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~ 82 (474)
++.+|.||+.....+|.+||+|+|++||+++|++|+++++++.||||||++.+.+...+ .++++|||++|++|++|+++
T Consensus 39 ~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~~gvvIdl~~l~~i~vd~~~ 117 (518)
T 3vte_A 39 STIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQ-VPFVVVDLRNMHSIKIDVHS 117 (518)
T ss_dssp HTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCS-SSEEEEECTTCCCEEEETTT
T ss_pred hhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCC-CCeEEEECCCCceeEEeCCC
Confidence 45789999998899999999999999999999999999999999999999988774221 13899999999999999999
Q ss_pred CEEEEcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEeccCCCc
Q 046660 83 KTAWVQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLDRKSMGE 162 (474)
Q Consensus 83 ~~~~v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~ 162 (474)
.+++||+|+++++|+++|.+++++|.+++|.|++|||||+++|||+|+++++||+.+|+|++++||++||++++.+.+|+
T Consensus 118 ~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~ 197 (518)
T 3vte_A 118 QTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGE 197 (518)
T ss_dssp TEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCH
T ss_pred CEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEeecccc
Confidence 99999999999999999999887899999999999999999999999999999999999999999999999997545689
Q ss_pred hhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecch-HHHHHHHHHHHHHHHhhccCceEEEEEEec--------
Q 046660 163 DLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMK-QNATKIVHEWQYIANKLHEGLFIDVVLIRA-------- 233 (474)
Q Consensus 163 dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------- 233 (474)
|||||+||||+|+|||||+++||++|.|+.++.+.+.+.+. +++.+++..|+++.+.+|+++++.+.+...
T Consensus 198 DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~ 277 (518)
T 3vte_A 198 DLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGK 277 (518)
T ss_dssp HHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-----
T ss_pred chhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCc
Confidence 99999999866899999999999999998887888877654 567889999999999999999998876531
Q ss_pred -CCceEEEEEEEEeCCccchhhhhhhccCcCCCCcCcccccchHHHHHhhcccCCC-Cc---chhcccCCCCCCCCcccc
Q 046660 234 -NSTMVAAFTSLFLGGIDRLLPLMQESFPELGLKKEDCTEMSWIESAHTLAGFQKE-EP---LHFLLDRNSSSSKGFFKA 308 (474)
Q Consensus 234 -~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~ 308 (474)
+..+.+.+.++|+|+.+++.+.|.+.+++++....++.+++|.+.+.+++..+.+ .+ ++.++++... ...+||.
T Consensus 278 ~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~k~ 356 (518)
T 3vte_A 278 NKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILLDRSAG-KKTAFSI 356 (518)
T ss_dssp --CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CGGGGGCTTCS-CCBEEEE
T ss_pred CCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchhhhhccCCcC-cccceee
Confidence 1235678889999999999888888777787666778899999998888765543 33 4555555433 3456788
Q ss_pred cccCcCCCCCHHHHHHHHHHHhhcCCCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEEEEecCCCchhHHHHHHHH
Q 046660 309 KSDYVKQPIPESAFEGIYDRFAEEEGQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILYLVAWGEDGASQRYINWIR 388 (474)
Q Consensus 309 ~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~~~~W~d~~~d~~~~~w~~ 388 (474)
||.|+++++++++++.+++.+.+.+...+.+.+.++||+++++++++|||+||++..|.+++.+.|.++++++++.+|++
T Consensus 357 ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~ 436 (518)
T 3vte_A 357 KLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVR 436 (518)
T ss_dssp EEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHH
T ss_pred echhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHH
Confidence 99999888999999999998876443358899999999999999999999999955899999999998888899999999
Q ss_pred HHHhcccCCccCCCCcccccCCCCccC-CCCCCCcchhhhhhhhhhhccccHHHHHHhhhhcCCCCCccCCCCCCCCCC
Q 046660 389 KLYGYTTPYVSNNPREAYLNYRDLDIG-TNNHGYTSYKQASIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSILPLPS 466 (474)
Q Consensus 389 ~~~~~l~~~~~~~~~~~Y~Ny~d~d~~-~~~~~~~~~~~~~~~~~~yfg~n~~RL~~IK~kyDP~~vF~~~q~I~~~~~ 466 (474)
++++.|.|+.+..+.++|+||+|.+++ .+..++++++....|++.|||+||+||++||+||||+|||+++|||+|..+
T Consensus 437 ~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 437 SVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999998654567899999998876 332345566667789999999999999999999999999999999999754
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.7e-85 Score=679.17 Aligned_cols=457 Identities=44% Similarity=0.819 Sum_probs=393.7
Q ss_pred cccccccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCC
Q 046660 3 FTIQNFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEE 82 (474)
Q Consensus 3 ~~~~~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~ 82 (474)
++.+|.||+....+.|.+|++|+|++||+++|++|+++++++.|||||||+.|.+...+ .++++|||++|++|++|+++
T Consensus 31 ~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~-~ggvvIdl~~m~~i~vd~~~ 109 (495)
T 3fw9_A 31 LSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSD-TPFILIDLMNLNRVSIDLES 109 (495)
T ss_dssp HTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCS-SCEEEEECTTCCCEEEETTT
T ss_pred hhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCC-CCeEEEECCCCCcEEEeCCC
Confidence 56789999999999999999999999999999999999999999999999988776532 24899999999999999999
Q ss_pred CEEEEcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEeccCCCc
Q 046660 83 KTAWVQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLDRKSMGE 162 (474)
Q Consensus 83 ~~~~v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~ 162 (474)
.+++||+|+++++|+++|.+++.+|.+++|.|++|||||+++|||+|+++++||+.+|+|++++||++||++++++.+++
T Consensus 110 ~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~ 189 (495)
T 3fw9_A 110 ETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGE 189 (495)
T ss_dssp TEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCH
T ss_pred CEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEcCCCCh
Confidence 99999999999999999999976799999999999999999999999999999999999999999999999997555789
Q ss_pred hhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecch-HHHHHHHHHHHHHHHhhccCceEEEEEEecCCceEEEE
Q 046660 163 DLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMK-QNATKIVHEWQYIANKLHEGLFIDVVLIRANSTMVAAF 241 (474)
Q Consensus 163 dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 241 (474)
|||||+|||++|+|||||+++||++|.|+.+..+.+.++.. +++.+++..|+++++++|+++++.+...+..+...+.+
T Consensus 190 DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (495)
T 3fw9_A 190 DVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLSVLGGADEKQVWLTM 269 (495)
T ss_dssp HHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEETTEEEEEE
T ss_pred hhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhcCChhHeEEEEEcCCCCceEEEE
Confidence 99999999666899999999999999998887887777653 56788999999999999999998776543334556788
Q ss_pred EEEEeCCccchhhhhhhccCcCCCCcCcccccchHHHHHhhcccCCCCcchhcccCCCCCCCCcccccccCcCCCCCHHH
Q 046660 242 TSLFLGGIDRLLPLMQESFPELGLKKEDCTEMSWIESAHTLAGFQKEEPLHFLLDRNSSSSKGFFKAKSDYVKQPIPESA 321 (474)
Q Consensus 242 ~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~ 321 (474)
.++|+|+++++.+.|.+.+++++.....+.+++|.+.+.+++..+. ++.++++.......+||.||.|+++++++++
T Consensus 270 ~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~ 346 (495)
T 3fw9_A 270 LGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKA 346 (495)
T ss_dssp EEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHH
T ss_pred EEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHH
Confidence 8999999999888888777778776677899999998887764432 2334444221013578889999998899999
Q ss_pred HHHHHHHHhhcCCCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEEEEecCCC--chhHHHHHHHHHHHhcccCCcc
Q 046660 322 FEGIYDRFAEEEGQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILYLVAWGED--GASQRYINWIRKLYGYTTPYVS 399 (474)
Q Consensus 322 i~~i~~~~~~~~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~~~~W~d~--~~d~~~~~w~~~~~~~l~~~~~ 399 (474)
++.+++.+.+.+. ..+++.++||+++++++++|||+||++..|.+++.+.|.++ ..++++.+|++++++.|+|+..
T Consensus 347 i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~ 424 (495)
T 3fw9_A 347 FYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVS 424 (495)
T ss_dssp HHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhcc
Confidence 9999998877654 67999999999999999999999998668999999999864 5778899999999999999965
Q ss_pred CCCCcccccCCCCccCCCCC-----CCcchhhhhhhhhhhccccHHHHHHhhhhcCCCCCccCCCCCCCCC
Q 046660 400 NNPREAYLNYRDLDIGTNNH-----GYTSYKQASIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSILPLP 465 (474)
Q Consensus 400 ~~~~~~Y~Ny~d~d~~~~~~-----~~~~~~~~~~~~~~yfg~n~~RL~~IK~kyDP~~vF~~~q~I~~~~ 465 (474)
..++++|+||+|.+++.+.. ++++++..+.|++.|||+||+||++||+||||+|||+++|||+|.+
T Consensus 425 ~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 425 KNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp CSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred CCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 45568999999988762111 1234445668999999999999999999999999999999999853
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.3e-82 Score=662.39 Aligned_cols=458 Identities=47% Similarity=0.900 Sum_probs=382.6
Q ss_pred ccccccccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCC-CcEEEEEcCCCCceEEcC
Q 046660 2 NFTIQNFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDH-VPFVIIDLIKLSEINVDA 80 (474)
Q Consensus 2 ~~~~~~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~-~~~~~idl~~~~~i~~d~ 80 (474)
+++.+|.||+.....+|.+||+|+|++||+++|++|++++++|+||||||++.|.|.+... +++++|||++||+|++|+
T Consensus 37 ~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~ 116 (500)
T 3tsh_A 37 GQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDG 116 (500)
T ss_dssp HTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEET
T ss_pred HhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECC
Confidence 4577899999999999999999999999999999999999999999999999887654211 258999999999999999
Q ss_pred CCCEEEEcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEeccCC
Q 046660 81 EEKTAWVQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLDRKSM 160 (474)
Q Consensus 81 ~~~~~~v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~ 160 (474)
++++++||+|++|+||+++|.++|..+.+++|.|++||+||+++|||+|+++++||+++|+|+++|||++||++++.+++
T Consensus 117 ~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~ 196 (500)
T 3tsh_A 117 KARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSM 196 (500)
T ss_dssp TTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHH
T ss_pred CCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEECCCceEEECCCC
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999986667
Q ss_pred CchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHHHHHHHhhccCceEEEEEEecCCceEEE
Q 046660 161 GEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEWQYIANKLHEGLFIDVVLIRANSTMVAA 240 (474)
Q Consensus 161 ~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 240 (474)
|+|||||+||||||||||||++++|++|.|+.+..+.+.+...+.+.+++..|+.+.+.+|+++...+.... +...
T Consensus 197 ~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~ 272 (500)
T 3tsh_A 197 GDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQG----PKAT 272 (500)
T ss_dssp CHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGGSCTTEEEEEEESS----SEEE
T ss_pred ChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhccChhhEEEEEecC----CCcE
Confidence 899999999988899999999999999999988777777766666778999999999999999877665432 2456
Q ss_pred EEEEEeCCccchhhhhhhccCcCCCCcCcccccchHHHHHhhcccCCCCcchhcccCCCCCCCCcccccccCcCCCCCHH
Q 046660 241 FTSLFLGGIDRLLPLMQESFPELGLKKEDCTEMSWIESAHTLAGFQKEEPLHFLLDRNSSSSKGFFKAKSDYVKQPIPES 320 (474)
Q Consensus 241 ~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~ 320 (474)
+..+|.|+.+++.+.+.+.++.++.....+..++|.+...+..............++... ...+.+.++.++.++++++
T Consensus 273 ~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 351 (500)
T 3tsh_A 273 FEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNS-FKPFAEYKSDYVYQPFPKT 351 (500)
T ss_dssp EEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHHHHHHCCCCC-CCCEEEEEEEEECSCCCHH
T ss_pred EEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhcccccccccccccccc-ccchhhhhhhhhcccCcHH
Confidence 678899998887777777677777666667778887766554332222222222333222 2344556677777788988
Q ss_pred HHHHHHHHHhhcCCCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEEEEecCCCchhHHHHHHHHHHHhcccCCccC
Q 046660 321 AFEGIYDRFAEEEGQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILYLVAWGEDGASQRYINWIRKLYGYTTPYVSN 400 (474)
Q Consensus 321 ~i~~i~~~~~~~~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~~~~W~d~~~d~~~~~w~~~~~~~l~~~~~~ 400 (474)
.++.+++.+...+. ...+.++++||++.++++++|+|+||++.+|++++...|.+++++++..+|++++++.++++...
T Consensus 352 ~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (500)
T 3tsh_A 352 VWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSK 430 (500)
T ss_dssp HHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCC
T ss_pred HHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcC
Confidence 88888877655543 34567889999999999999999999977888999999999999999999999999999998765
Q ss_pred CCCcccccCCCCccCCCCC--CCcchhhhhhhhhhhccccHHHHHHhhhhcCCCCCccCCCCCCCCC
Q 046660 401 NPREAYLNYRDLDIGTNNH--GYTSYKQASIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSILPLP 465 (474)
Q Consensus 401 ~~~~~Y~Ny~d~d~~~~~~--~~~~~~~~~~~~~~yfg~n~~RL~~IK~kyDP~~vF~~~q~I~~~~ 465 (474)
.+.++|+||+|.+++.+.. ....+.....|++.|||+||+||++||+||||+|+|+++|||+|.-
T Consensus 431 ~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 431 NPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp SSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred CCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 6678999999998763321 1112344568999999999999999999999999999999999964
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.7e-75 Score=603.48 Aligned_cols=433 Identities=24% Similarity=0.437 Sum_probs=354.0
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceE-EcCCCCEE
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEIN-VDAEEKTA 85 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~-~d~~~~~~ 85 (474)
..+|+.+....|.+|++|+|++||+++|++|+++++++.+||||||+.+.+.... +++++|||++|++|. +|+++.++
T Consensus 26 ~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~~~vvIdl~~~~~i~~vd~~~~~v 104 (473)
T 3rja_A 26 VEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGE-NGHLMVQLDRMIDVISYNDKTGIA 104 (473)
T ss_dssp TCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSS-SSCEEEECTTCCCEEEEETTTTEE
T ss_pred HHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCC-CCeEEEECCCCCceEEEcCCCCEE
Confidence 4568877788999999999999999999999999999999999999986544321 247999999999996 99999999
Q ss_pred EEcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-ccCCCchh
Q 046660 86 WVQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RKSMGEDL 164 (474)
Q Consensus 86 ~v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl 164 (474)
+||+|++|++|+++|.++| ++.++.|.|++|||||+++|||+|+++++||+.+|+|+++|||++||++++ ++.+|+||
T Consensus 105 ~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dL 183 (473)
T 3rja_A 105 HVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADL 183 (473)
T ss_dssp EECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHH
T ss_pred EECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCCeEEEeCCCCCcch
Confidence 9999999999999999987 488899999999999999999999999999999999999999999999996 56679999
Q ss_pred hhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecch--HHHHHHHHHHHHHHH-hhccCceEEEEEEecCCceEEEE
Q 046660 165 FWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMK--QNATKIVHEWQYIAN-KLHEGLFIDVVLIRANSTMVAAF 241 (474)
Q Consensus 165 ~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~ 241 (474)
|||+||++ |+|||||+++||++|.|+....+.+.+.+. +++.+++.+|+++.. ++|+++++.+.+... . .+.+
T Consensus 184 f~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~-~--~~~~ 259 (473)
T 3rja_A 184 FWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVAPREVNFRIGDYGA-G--NPGI 259 (473)
T ss_dssp HHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTCCTTEEEEEEESSS-S--CCEE
T ss_pred hhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCCChhHEEEEEEcCC-C--cEEE
Confidence 99999997 799999999999999998777777777653 347789999999988 899999988776521 1 2677
Q ss_pred EEEEeCCccchhhhhhhccCcCC-CCcCccc-ccchHHHHHhhcccCCCCcchhcccCCCCCCCCcccccccCcCCCCCH
Q 046660 242 TSLFLGGIDRLLPLMQESFPELG-LKKEDCT-EMSWIESAHTLAGFQKEEPLHFLLDRNSSSSKGFFKAKSDYVKQPIPE 319 (474)
Q Consensus 242 ~~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~ 319 (474)
.++|+|+++++.+++++++...+ +....+. +++|.+...+++... .++.... . ....++.+|.+.. ++++
T Consensus 260 ~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~-~~~~~~~ks~~~~-~l~~ 331 (473)
T 3rja_A 260 EGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFD---HVDFITP---Q-PVENFYAKSLTLK-SIKG 331 (473)
T ss_dssp EEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSS---CCCCSSC---C-CCBEEEEEEEEES-CCTT
T ss_pred EEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCC---CcccccC---C-CCCcceEeccccC-CCCH
Confidence 88999999998888887543333 3456677 899999876654311 1111100 0 0234567887765 6999
Q ss_pred HHHHHHHHHHhhc-CC---CcEEEEEEecCC---ccCCCCCCCCCCccccCceEEEEEEEecCC-CchhHHHHHHHHHHH
Q 046660 320 SAFEGIYDRFAEE-EG---QSAVIALIPYGG---KMNEISESEIPFPHRAGNIYKILYLVAWGE-DGASQRYINWIRKLY 391 (474)
Q Consensus 320 ~~i~~i~~~~~~~-~~---~~~~i~~~~~GG---ai~~~~~~~tAf~~R~~~~~~v~~~~~W~d-~~~d~~~~~w~~~~~ 391 (474)
++++.+++.+.+. +. ..+.++++++|| ++.++++++|||+||+ ..|.+++...|.+ +..+++..+|+++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 410 (473)
T 3rja_A 332 DAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWV 410 (473)
T ss_dssp HHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHH
Confidence 9999999988653 21 245688999998 6788899999999999 6899999999964 545556677777776
Q ss_pred hcccCCccCCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHHhhhhcCCCCCccCCCCCCCCC
Q 046660 392 GYTTPYVSNNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSILPLP 465 (474)
Q Consensus 392 ~~l~~~~~~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n~~RL~~IK~kyDP~~vF~~~q~I~~~~ 465 (474)
+.+.+.......++|+||+|.+++ ...|++.|||+||+||++||+||||+|+|+++|||+|.+
T Consensus 411 ~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 411 NSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 666544322235799999998764 237999999999999999999999999999999999864
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=6.2e-74 Score=595.62 Aligned_cols=434 Identities=23% Similarity=0.363 Sum_probs=344.0
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEE
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWV 87 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v 87 (474)
..|+.+....|.+|+.|+|++||+++|++|+++++++.||||||++.+.+...+ ++++|||++||+|++|+++.+++|
T Consensus 25 ~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~--~gvvIdl~~l~~i~vd~~~~~v~v 102 (501)
T 3pop_A 25 HSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR--RDLVLDLHNLHAIGPAADGAGVRV 102 (501)
T ss_dssp CCSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC--CSEEEECTTCCCEEECTTSSSEEE
T ss_pred HHHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC--CEEEEEecccCCeEEcCCCCEEEE
Confidence 446666677999999999999999999999999999999999999998776532 389999999999999999999999
Q ss_pred cCCCcHHHHHHHHHh-cCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEc--cCCc--EEe----cc
Q 046660 88 QAGATLGQLYYRIAE-GSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVD--AEGR--LLD----RK 158 (474)
Q Consensus 88 ~~G~~~~~~~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~--~~G~--~~~----~~ 158 (474)
|+|++|++|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+.+|+|+++|||+ +||+ ++. ++
T Consensus 103 ~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~~da~G~~~~v~~~~~~~ 180 (501)
T 3pop_A 103 GSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVTARADDT 180 (501)
T ss_dssp ETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEETTCC
T ss_pred ECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEEEecCCCCEEEEEeccCCC
Confidence 999999999999974 44 7889999999999999999999999999999999999999999 8999 443 24
Q ss_pred CCCchhhhhhccccCcceeEEEEEEEEE----------eec-CceEEEEEEEecch----HHHHHHHHHHHHHHH--hhc
Q 046660 159 SMGEDLFWAIRGGGGASFGVVVAWKVRL----------VTV-PSTVTLFTVIRTMK----QNATKIVHEWQYIAN--KLH 221 (474)
Q Consensus 159 ~~~~dl~~a~rG~g~~~fGvvt~~~~~~----------~p~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~p 221 (474)
.+|+|||||+||||+|+|||||+++||+ +|. |..+..+.+.|+.. +.+.+++..|++|.. ..|
T Consensus 181 ~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 260 (501)
T 3pop_A 181 GDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWHERHSEP 260 (501)
T ss_dssp HHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred CCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcCHHHHHHHHHHHHHHHhhccCC
Confidence 5789999999999668999999999999 664 34566667777542 234578888888875 345
Q ss_pred cCc----eEEEEEEecCCceEEEEEEEEeCCccchhhhhhhccCc------CCCCcCcccccchHHHHHhhcccCCCCcc
Q 046660 222 EGL----FIDVVLIRANSTMVAAFTSLFLGGIDRLLPLMQESFPE------LGLKKEDCTEMSWIESAHTLAGFQKEEPL 291 (474)
Q Consensus 222 ~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (474)
++. ...+.+... ..-.+.+..+|.|+.+++.+++++++.. +.+... +.+++|.+...+.. .+.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~-~~~~~~- 336 (501)
T 3pop_A 261 GSPESSLFATFFVNHV-SSGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR-GGVMSWLTGTRYMS-QADCGD- 336 (501)
T ss_dssp TCGGGGEEEEEEEECG-GGCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-EEEEEHHHHHHHTC-BCSCGG-
T ss_pred CccccceEEEEEecCC-CCCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-eEEeCHHHHHhhhc-CCCCCc-
Confidence 543 223333321 1113455667889887776666664422 223333 77889988765432 111100
Q ss_pred hhcccCCCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhc-CCCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEE
Q 046660 292 HFLLDRNSSSSKGFFKAKSDYVKQPIPESAFEGIYDRFAEE-EGQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILY 370 (474)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~-~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~ 370 (474)
. ...+++.++.|++++++++.++.+++.+... +...+.++++++||+++++++++|||+||+ ..|++++
T Consensus 337 -~--------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~hR~-~~~~~~~ 406 (501)
T 3pop_A 337 -V--------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRD-SVVKSSW 406 (501)
T ss_dssp -G--------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEE
T ss_pred -c--------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCCCCCccCcC-ccEEEEE
Confidence 0 0234567888988789999999999988763 334578899999999999999999999999 6899999
Q ss_pred EEecCCCchhHHHHHHHHHHHhcccCCcc------CCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHH
Q 046660 371 LVAWGEDGASQRYINWIRKLYGYTTPYVS------NNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNNFDRLVH 444 (474)
Q Consensus 371 ~~~W~d~~~d~~~~~w~~~~~~~l~~~~~------~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n~~RL~~ 444 (474)
...|.+++.++++.+|++++++.|.+... ..+.++|+||+|.+++.+. .+++ ...|++.|||+||+||++
T Consensus 407 ~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~-~~~~---~~~w~~~Yyg~N~~RL~~ 482 (501)
T 3pop_A 407 FSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA-RNRS---GEPWHHLYYKDNYARLRS 482 (501)
T ss_dssp EEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT-TCCS---SCCHHHHHHGGGHHHHHH
T ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc-cccc---cchHHHHHhHhHHHHHHH
Confidence 99999888889999999999999876532 1246899999998876211 0111 234999999999999999
Q ss_pred hhhhcCCCCCccCCCCCCC
Q 046660 445 VKTTVDPHNFFRNEQSILP 463 (474)
Q Consensus 445 IK~kyDP~~vF~~~q~I~~ 463 (474)
||+||||+|+|+++|||+|
T Consensus 483 vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 483 AKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp HHHHHCTTCCSCCTTCCCC
T ss_pred HHHHhCcccccCCCCCCCC
Confidence 9999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1e-69 Score=568.42 Aligned_cols=429 Identities=27% Similarity=0.461 Sum_probs=330.2
Q ss_pred cccccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCE
Q 046660 5 IQNFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKT 84 (474)
Q Consensus 5 ~~~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~ 84 (474)
.+|.|| ...|.+||+|+|++||+++|++|++++++|.||||||++.+.+...+ ++++|||++||+|++|+++.+
T Consensus 49 ~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~--~gvvIdl~~m~~i~~d~~~~~ 122 (523)
T 2wdx_A 49 GANSRF----NGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPD--VKVIIDMSLLTEIAYDPSMNA 122 (523)
T ss_dssp SSCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTT--CCEEEECTTCCCEEEETTTTE
T ss_pred hhhhcc----cCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCC--CeEEEEcccCCCEEEcCCCCE
Confidence 345566 55899999999999999999999999999999999999988776532 389999999999999999999
Q ss_pred EEEcCCCcHHHHHHHHHh-cCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccC--CcEEe---cc
Q 046660 85 AWVQAGATLGQLYYRIAE-GSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAE--GRLLD---RK 158 (474)
Q Consensus 85 ~~v~~G~~~~~~~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~--G~~~~---~~ 158 (474)
|+||+|++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+.+|+|+++|||++| |+++. +.
T Consensus 123 v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~ 200 (523)
T 2wdx_A 123 FLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATR 200 (523)
T ss_dssp EEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEES
T ss_pred EEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEeccc
Confidence 999999999999999984 65 788999999999999999999999999999999999999999955 99752 33
Q ss_pred C-CCch--hhhhhccccCcceeEEEEEEEEE-----------eecCc-eEEEEEEEecch----HHHHHHHHHHHHHHHh
Q 046660 159 S-MGED--LFWAIRGGGGASFGVVVAWKVRL-----------VTVPS-TVTLFTVIRTMK----QNATKIVHEWQYIANK 219 (474)
Q Consensus 159 ~-~~~d--l~~a~rG~g~~~fGvvt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 219 (474)
. +|+| ||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|+.. +.+.++++.|++|...
T Consensus 201 ~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 280 (523)
T 2wdx_A 201 ERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYER 280 (523)
T ss_dssp CTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCHHHHHHHHHHHHHHHhh
Confidence 2 4555 99999988768999999999999 99875 455666777542 3346788888888764
Q ss_pred --hccC----ceEEEEEEec-CC--ceEEEEEEEEeCCccchhhhhhhccC---c-CC-CCcCcccccchHHHHHhhccc
Q 046660 220 --LHEG----LFIDVVLIRA-NS--TMVAAFTSLFLGGIDRLLPLMQESFP---E-LG-LKKEDCTEMSWIESAHTLAGF 285 (474)
Q Consensus 220 --~p~~----~~~~~~~~~~-~~--~~~~~~~~~~~g~~~~~~~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~ 285 (474)
.|++ +...+.+... .+ .+.+.+..+|.|+.++..+.+++++. + ++ +....+..++|.+....
T Consensus 281 ~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---- 356 (523)
T 2wdx_A 281 NSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPG---- 356 (523)
T ss_dssp SCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCC----
T ss_pred cCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccccceeccHHHHHHh----
Confidence 4555 2223323221 12 33566677889988776666655322 1 22 22233444555441100
Q ss_pred CCCCcchhcccCCCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhc-CCCcEEEEEEecCCccCCCCCCCCCCccccCc
Q 046660 286 QKEEPLHFLLDRNSSSSKGFFKAKSDYVKQPIPESAFEGIYDRFAEE-EGQSAVIALIPYGGKMNEISESEIPFPHRAGN 364 (474)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~-~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~ 364 (474)
... ....++.++.++.+.++++.++.+++.+... +...+.+.++++||++.+++.++|||+||+ +
T Consensus 357 ---------~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~ 422 (523)
T 2wdx_A 357 ---------RGG----RGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-A 422 (523)
T ss_dssp ---------CCS----SCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-C
T ss_pred ---------hcC----CCCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccccCCCccccccccC-c
Confidence 000 0113455677776668888999999988653 224567889999999999999999999999 6
Q ss_pred eEEEEEEEecCCCchhHHHHHHHHHHHhcccCCcc------CCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhcccc
Q 046660 365 IYKILYLVAWGEDGASQRYINWIRKLYGYTTPYVS------NNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNN 438 (474)
Q Consensus 365 ~~~v~~~~~W~d~~~d~~~~~w~~~~~~~l~~~~~------~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n 438 (474)
.|++++...|.++++++++.+|++++++.+.+... ....++|+||+|.+++.+. .+++. ..|++.|||+|
T Consensus 423 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n 498 (523)
T 2wdx_A 423 ILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGN 498 (523)
T ss_dssp SEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGG
T ss_pred eEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccccc-cccch---hHHHHHHHHHH
Confidence 89999999999988889999999999988873211 1135799999999875210 11111 14899999999
Q ss_pred HHHHHHhhhhcCCCCCccCCCCCCC
Q 046660 439 FDRLVHVKTTVDPHNFFRNEQSILP 463 (474)
Q Consensus 439 ~~RL~~IK~kyDP~~vF~~~q~I~~ 463 (474)
|+||++||+||||+|||+++|+|+|
T Consensus 499 ~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 499 HPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp HHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred HHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 9999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.5e-69 Score=565.62 Aligned_cols=431 Identities=26% Similarity=0.442 Sum_probs=331.5
Q ss_pred CCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEEcC
Q 046660 10 FSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWVQA 89 (474)
Q Consensus 10 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v~~ 89 (474)
|+.+....|.+||.|+|++||+++|++|+++++++.||||||++.+.+.... ++++|||++||+|++|+++.+|+||+
T Consensus 48 ~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~--~gvvIdl~~l~~i~~d~~~~~v~v~a 125 (521)
T 2ipi_A 48 FNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPA--VRAVIDMSQMRQVFYDSGKRAFAVEP 125 (521)
T ss_dssp SCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTT--CCEEEECTTCCCEEEETTTTEEEECT
T ss_pred ccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCC--CeEEEecccCCCeEEeCCCCEEEEeC
Confidence 3333356899999999999999999999999999999999999988665332 38999999999999999999999999
Q ss_pred CCcHHHHHHHHH-hcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccC--CcEE--e-ccC-CCc
Q 046660 90 GATLGQLYYRIA-EGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAE--GRLL--D-RKS-MGE 162 (474)
Q Consensus 90 G~~~~~~~~~l~-~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~--G~~~--~-~~~-~~~ 162 (474)
|++|.+|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+.+|+|+++|||++| |+++ . +.. +++
T Consensus 126 G~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~ 203 (521)
T 2ipi_A 126 GATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDP 203 (521)
T ss_dssp TSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCT
T ss_pred CcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCC
Confidence 999999999997 665 788999999999999999999999999999999999999999977 9974 2 322 455
Q ss_pred --hhhhhhccccCcceeEEEEEEEEE-----------eecCc-eEEEEEEEecch----HHHHHHHHHHHHHHHh--hcc
Q 046660 163 --DLFWAIRGGGGASFGVVVAWKVRL-----------VTVPS-TVTLFTVIRTMK----QNATKIVHEWQYIANK--LHE 222 (474)
Q Consensus 163 --dl~~a~rG~g~~~fGvvt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~ 222 (474)
|||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|+.. +.+.++++.|+++... .|+
T Consensus 204 ~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~ 283 (521)
T 2ipi_A 204 NRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAG 283 (521)
T ss_dssp THHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSS
T ss_pred CHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCC
Confidence 599999998668999999999999 98875 355556666432 2346788888888764 455
Q ss_pred C----ceEEEEEEecCCceEEEEEEEEeCCccchhhhhhhccC---c-CC-CCcCcccccchHHHHHhhcccCCCCcchh
Q 046660 223 G----LFIDVVLIRANSTMVAAFTSLFLGGIDRLLPLMQESFP---E-LG-LKKEDCTEMSWIESAHTLAGFQKEEPLHF 293 (474)
Q Consensus 223 ~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (474)
+ +...+.+.... ...+.+...|.|+.++..+.+++++. + ++ +....+..++|.+....+...
T Consensus 284 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-------- 354 (521)
T 2ipi_A 284 TPYASMHSVFYLNSRA-AGQILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFD-------- 354 (521)
T ss_dssp SGGGGCEEEEEEECTT-SCEEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC--------
T ss_pred ccccceEEEEEeccCC-CCceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCC--------
Confidence 4 33333333221 11344556788887776666555322 1 22 233445567887754322110
Q ss_pred cccCCCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcCCCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEEEEe
Q 046660 294 LLDRNSSSSKGFFKAKSDYVKQPIPESAFEGIYDRFAEEEGQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILYLVA 373 (474)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~~~~ 373 (474)
.. ....++.++.++.+.++++.++.+++.+...+...+.+.++++||++.+++.++|||+||+ +.+.+++...
T Consensus 355 -----~~-~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~ 427 (521)
T 2ipi_A 355 -----TG-GFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSAT 427 (521)
T ss_dssp -----CT-TCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEE
T ss_pred -----CC-CCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEe
Confidence 00 0023345677776678999999999988765445678889999999999999999999999 6899999999
Q ss_pred cCCCchhHHHHHHHHHHHhcccCCccC------CCCcccccCCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHHhhh
Q 046660 374 WGEDGASQRYINWIRKLYGYTTPYVSN------NPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNNFDRLVHVKT 447 (474)
Q Consensus 374 W~d~~~d~~~~~w~~~~~~~l~~~~~~------~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n~~RL~~IK~ 447 (474)
|.++++++++.+|++++++.+.+.... ...++|+||+|.+++... .+++ ...|++.|||+||+||++||+
T Consensus 428 w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~~---~~~~~~~y~g~n~~RL~~iK~ 503 (521)
T 2ipi_A 428 WMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDER-WNTS---GVPWYTLYYKGNYPRLQKVKA 503 (521)
T ss_dssp ESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTT-TSCC---SCCHHHHHHGGGHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccccc-cccc---hhhHHHhhhhhHHHHHHHHHH
Confidence 999888899999999999988743211 135799999999875210 0111 124999999999999999999
Q ss_pred hcCCCCCccCCCCCCCC
Q 046660 448 TVDPHNFFRNEQSILPL 464 (474)
Q Consensus 448 kyDP~~vF~~~q~I~~~ 464 (474)
||||+|||+++|+|+|+
T Consensus 504 kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 504 RWDPRDVFRHALSVRPP 520 (521)
T ss_dssp HHCTTCCSCCTTCCCCC
T ss_pred HhCCcCEecCCCCCCCC
Confidence 99999999999999984
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.7e-69 Score=565.57 Aligned_cols=433 Identities=28% Similarity=0.479 Sum_probs=331.8
Q ss_pred CCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEEcC
Q 046660 10 FSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWVQA 89 (474)
Q Consensus 10 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v~~ 89 (474)
|+.+....|.+|+.|+|++||+++|++|++++++|.||||||++.+.+.... ++++|||++||+|++|+++.+|+||+
T Consensus 51 ~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~--~gvvIdl~~l~~i~~d~~~~~v~v~a 128 (530)
T 2y3s_A 51 ENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD--VRVVMDMSRLSAVGFDEERGAFAVEA 128 (530)
T ss_dssp SCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT--CCEEEECTTCCCEEEETTTTEEEEET
T ss_pred hhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC--CeEEEEcccCCCEEEcCCCCEEEEeC
Confidence 4444466999999999999999999999999999999999999988665432 38999999999999999999999999
Q ss_pred CCcHHHHHHHHHh-cCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEc--cCCcEE--e-ccC-CCc
Q 046660 90 GATLGQLYYRIAE-GSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVD--AEGRLL--D-RKS-MGE 162 (474)
Q Consensus 90 G~~~~~~~~~l~~-~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~--~~G~~~--~-~~~-~~~ 162 (474)
|++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+.+|+|+++|||+ ++|+++ . +.. +|+
T Consensus 129 G~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~ 206 (530)
T 2y3s_A 129 GATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDP 206 (530)
T ss_dssp TCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCT
T ss_pred CCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCC
Confidence 9999999999985 65 7889999999999999999999999999999999999999999 459974 2 332 455
Q ss_pred --hhhhhhccccCcceeEEEEEEEEE------------eecCc-eEEEEEEEecch----HHHHHHHHHHHHHHHh--hc
Q 046660 163 --DLFWAIRGGGGASFGVVVAWKVRL------------VTVPS-TVTLFTVIRTMK----QNATKIVHEWQYIANK--LH 221 (474)
Q Consensus 163 --dl~~a~rG~g~~~fGvvt~~~~~~------------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p 221 (474)
|||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|+.. +.+.++++.|+++... .|
T Consensus 207 d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p 286 (530)
T 2y3s_A 207 NHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGP 286 (530)
T ss_dssp THHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCST
T ss_pred ChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCC
Confidence 499999998768999999999999 88765 455566666432 3346788888888754 45
Q ss_pred cC----ceEEEEEEecCCceEEEEEEEEeCCccchhhhhhhccC---c-CC-CCcCcccccchHHHHHhhcccCCCCcch
Q 046660 222 EG----LFIDVVLIRANSTMVAAFTSLFLGGIDRLLPLMQESFP---E-LG-LKKEDCTEMSWIESAHTLAGFQKEEPLH 292 (474)
Q Consensus 222 ~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (474)
++ +...+.+... ....+.+...|.|+.++..+++++++. . ++ +....+..++|.+....+...+.+
T Consensus 287 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 361 (530)
T 2y3s_A 287 DSPWCDLYSVLALTRS-QSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDG---- 361 (530)
T ss_dssp TCGGGGEEEEEEEECG-GGSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCCC----
T ss_pred CcccceeEEEEEeccC-CCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCCC----
Confidence 54 2222223222 112344556788887776666655321 1 23 233445667887643322111100
Q ss_pred hcccCCCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcC--CCcEEEEEEecCCccCCCCCCCCCCccccCceEEEEE
Q 046660 293 FLLDRNSSSSKGFFKAKSDYVKQPIPESAFEGIYDRFAEEE--GQSAVIALIPYGGKMNEISESEIPFPHRAGNIYKILY 370 (474)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~--~~~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~ 370 (474)
.. . ..++.++.++.+.++++.++.+++.+...+ ...+.+.++++||++.+++.++|||+||+ +.|++++
T Consensus 362 ------~~-~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~ 432 (530)
T 2y3s_A 362 ------DM-T-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVY 432 (530)
T ss_dssp ------CC-C-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEE
T ss_pred ------cc-c-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEE
Confidence 00 1 234566777776789899999999887632 23467889999999999999999999999 6899999
Q ss_pred EEecCCCchhHHHHHHHHHHHhcccCCcc------CCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHH
Q 046660 371 LVAWGEDGASQRYINWIRKLYGYTTPYVS------NNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNNFDRLVH 444 (474)
Q Consensus 371 ~~~W~d~~~d~~~~~w~~~~~~~l~~~~~------~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n~~RL~~ 444 (474)
...|.++++++++.+|++++++.+.+... ....++|+||+|.+++.+. .+++ ...|++.|||+||+||++
T Consensus 433 ~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~s---~~~~~~~yyg~n~~RL~~ 508 (530)
T 2y3s_A 433 VTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEE-WNTS---GVPWSELYYKDAYPRLQA 508 (530)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTT-TCCS---SCCHHHHHHGGGHHHHHH
T ss_pred EEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccccc-cccc---hhHHHHHHHHHHHHHHHH
Confidence 99999988889999999999998873321 1135799999999876211 1111 124999999999999999
Q ss_pred hhhhcCCCCCccCCCCCCCC
Q 046660 445 VKTTVDPHNFFRNEQSILPL 464 (474)
Q Consensus 445 IK~kyDP~~vF~~~q~I~~~ 464 (474)
||+||||+|||+++|+|+|+
T Consensus 509 iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 509 VKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp HHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHhCchhhcCCCCCCCCC
Confidence 99999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2.2e-69 Score=564.27 Aligned_cols=432 Identities=22% Similarity=0.420 Sum_probs=340.1
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEE
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAW 86 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~ 86 (474)
..+|+......|.+|++|+|++||+++|++|+++++|+.||||||++.+.+.... +++++|||++||+|++| ++++|+
T Consensus 32 ~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~-~~gvvIdl~~l~~i~~d-~~~~v~ 109 (503)
T 1zr6_A 32 GTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGE-DGHLMLELDRMYRVSVD-DNNVAT 109 (503)
T ss_dssp TSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTTSS-SSCEEEECTTCCCEEEC-TTSCEE
T ss_pred hhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCC-CCcEEEECccCCCEEEC-CCCeEE
Confidence 4678877788999999999999999999999999999999999999987655311 13899999999999999 888999
Q ss_pred EcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-ccCCCchhh
Q 046660 87 VQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RKSMGEDLF 165 (474)
Q Consensus 87 v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl~ 165 (474)
||+|++|.+|+++|.+++ ++.+|.|.|++|||||+++|||+|+++++||+.+|+|+++|||++||++++ +..+|+|||
T Consensus 110 v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~ 188 (503)
T 1zr6_A 110 IQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLF 188 (503)
T ss_dssp EETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHH
T ss_pred EecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHH
Confidence 999999999999997775 588999999999999999999999999999999999999999999999996 666789999
Q ss_pred hhhccccCcceeEEEEEEEEEeecCceEEEEEEEecc-hHHHHHHHHHHHHHHHh-hccCceEEEEEEecCCceEEEEEE
Q 046660 166 WAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTM-KQNATKIVHEWQYIANK-LHEGLFIDVVLIRANSTMVAAFTS 243 (474)
Q Consensus 166 ~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~ 243 (474)
||+|||+ |+|||||+++||++|.|+....+.+.+.+ .+.+.++++.|+++... +|++++..+.+... .+.+..
T Consensus 189 ~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~ 263 (503)
T 1zr6_A 189 WALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINAN----ALNWEG 263 (503)
T ss_dssp HHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT----EEEEEE
T ss_pred HHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC----eEEEEE
Confidence 9999999 59999999999999998866666666654 34467888999998876 88888877766532 566678
Q ss_pred EEeCCccchhhhhhhccCcCCC--CcCcccccchHHHHHhhcccCCCCcchhcccC-CCCCCCCcccccccCcCCCCCHH
Q 046660 244 LFLGGIDRLLPLMQESFPELGL--KKEDCTEMSWIESAHTLAGFQKEEPLHFLLDR-NSSSSKGFFKAKSDYVKQPIPES 320 (474)
Q Consensus 244 ~~~g~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~l~~~ 320 (474)
+|+|+.+++.+.+++++..++. ....+..++|.+....+.. +.. .+. .+.+....++.++.++++ ++++
T Consensus 264 ~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~p~g~~~~~~~~s~~~~~-l~~~ 335 (503)
T 1zr6_A 264 NFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY---GAD----LNITYNYDVHEYFYANSLTAPR-LSDE 335 (503)
T ss_dssp EESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCT---TCC----SSCSSCCCCCBCEEEEEEEESS-CCHH
T ss_pred EEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcC---CCc----ccccCCCCccccceecccchhh-CCHH
Confidence 8999988877777765433333 1234456677764432211 000 011 011012245667777776 8899
Q ss_pred HHHHHHHHHh-hcCC---CcEEEEEEecCC---ccCCCCCCCCCCccccCceEEEEEEEec-----CCCchhHHHHHHHH
Q 046660 321 AFEGIYDRFA-EEEG---QSAVIALIPYGG---KMNEISESEIPFPHRAGNIYKILYLVAW-----GEDGASQRYINWIR 388 (474)
Q Consensus 321 ~i~~i~~~~~-~~~~---~~~~i~~~~~GG---ai~~~~~~~tAf~~R~~~~~~v~~~~~W-----~d~~~d~~~~~w~~ 388 (474)
.++.+++.+. ..+. ..+.+.++++|| ++.++++++++|+||+ +.|++++...| .++..++...+|++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (503)
T 1zr6_A 336 AIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQ 414 (503)
T ss_dssp HHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHH
Confidence 9999999887 5322 235678899999 8888888999999998 57888876666 34444555667777
Q ss_pred HHHhcccCCccCCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhccccHHHHHHhhhhcCCCCCccCCCCCCCCCC
Q 046660 389 KLYGYTTPYVSNNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSILPLPS 466 (474)
Q Consensus 389 ~~~~~l~~~~~~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n~~RL~~IK~kyDP~~vF~~~q~I~~~~~ 466 (474)
++.+.+.........++|+||+|.+++ ...|++.|||+||+||++||+||||+|+|+++|+|+|...
T Consensus 415 ~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w 481 (503)
T 1zr6_A 415 GFVATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY 481 (503)
T ss_dssp HHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC
T ss_pred HHHHHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhh
Confidence 776666544321123799999998764 2369999999999999999999999999999999998644
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.6e-66 Score=538.21 Aligned_cols=419 Identities=23% Similarity=0.330 Sum_probs=327.1
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEE
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAW 86 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~ 86 (474)
..+|+......|.+|+.|+|++||+++|++|+++++++.|||||||+.+.+...+ +++|||++||+|++|+++.+++
T Consensus 28 ~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~---gvvi~l~~l~~i~~d~~~~~v~ 104 (459)
T 2bvf_A 28 ANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG---GIVLDLRLMNSIHIDTAGSRAR 104 (459)
T ss_dssp HCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS---SEEEECTTCCCEEEETTTTEEE
T ss_pred HHHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC---eEEEECCCCCCEEECCCCCEEE
Confidence 3578888888999999999999999999999999999999999999988765444 8999999999999999999999
Q ss_pred EcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-ccCCCchhh
Q 046660 87 VQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RKSMGEDLF 165 (474)
Q Consensus 87 v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl~ 165 (474)
||+|++|.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+.+|+|+++|||++||++++ +..+|+|||
T Consensus 105 v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~~dLf 182 (459)
T 2bvf_A 105 IGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDERPELF 182 (459)
T ss_dssp EETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESSSSHHHH
T ss_pred ECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCCCChhhH
Confidence 999999999999999875 88999999999999999999999999999999999999999999999996 566789999
Q ss_pred hhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHH--HHHHHHHHHHHhhccCceEEEEEEe-cCCceEEEEE
Q 046660 166 WAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNAT--KIVHEWQYIANKLHEGLFIDVVLIR-ANSTMVAAFT 242 (474)
Q Consensus 166 ~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~ 242 (474)
||+|||+ |+|||||+++||++|.|.......+.|+.. .+. ++++.|+++....|+++...+.+.. ..+...+.+.
T Consensus 183 ~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (459)
T 2bvf_A 183 WAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMADHIYPSVFVGVDENRAPSVTVC 260 (459)
T ss_dssp HHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTTTCCCEEEEEECTTCCEEEEEE
T ss_pred hHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcHhhccccccCcccCCCceEEEE
Confidence 9999987 899999999999999976665666666642 244 7888899888777877744332221 1234456666
Q ss_pred EEEeCCccchhhhhhhccCcCC-CCcCcccccchHHHHHhhcccCCCCcchhcccCCCCCCCCcccc-cccCcCCCCCHH
Q 046660 243 SLFLGGIDRLLPLMQESFPELG-LKKEDCTEMSWIESAHTLAGFQKEEPLHFLLDRNSSSSKGFFKA-KSDYVKQPIPES 320 (474)
Q Consensus 243 ~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~l~~~ 320 (474)
..|.|+.++....+.++ .+++ +....+..++|.+...... ..... +. ....+.. ++.++.+.++++
T Consensus 261 ~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~-~~~~~~~~~s~~~~~~~~~~ 328 (459)
T 2bvf_A 261 VGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA---------EVGSF-ED-GMSNLWIDREIAMPNARFAE 328 (459)
T ss_dssp EECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH---------HHSCC-CC-SCEEEEEEEEECSCHHHHHH
T ss_pred EEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc---------ccccC-CC-CCcceEeccccccCCCCCHH
Confidence 78899877666666653 3343 3334556678876433210 00000 11 1122222 566665335566
Q ss_pred HHHHHHHHHhhcC-CC-cEEEEEEecCCccCCCCCCCCCCccccCceEEEEEEEecCCCc-hhHHHHHHHHHHHhcccCC
Q 046660 321 AFEGIYDRFAEEE-GQ-SAVIALIPYGGKMNEISESEIPFPHRAGNIYKILYLVAWGEDG-ASQRYINWIRKLYGYTTPY 397 (474)
Q Consensus 321 ~i~~i~~~~~~~~-~~-~~~i~~~~~GGai~~~~~~~tAf~~R~~~~~~v~~~~~W~d~~-~d~~~~~w~~~~~~~l~~~ 397 (474)
.++.+++.+.+.+ .. .+.+++. ||++.+ .+.+||+||+. .| +.+...|.++. +++.+.+|++++++.++++
T Consensus 329 ~~~~l~~~~~~~~~~~~~~~~~~~--gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~ 402 (459)
T 2bvf_A 329 AIAGNLDKFVSEPASGGSVKLEIE--GMPFGN--PKRTPARHRDA-MG-VLALAEWSGAAPGSEKYPELARELDAALLRA 402 (459)
T ss_dssp HHHTTGGGCEEETTTTEEEEEEEE--CCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTSTTTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCceeEEEEe--CCccCC--CCCCCcccCCc-ce-EEEEEEeCCCccchHHHHHHHHHHHHHhccc
Confidence 7777776665544 32 3444444 887766 56799999994 67 88888999887 7778899999999999988
Q ss_pred ccCCCCcccccCCCCccCCCCCCCcchhhhhhhhhhhcccc-HHHHHHhhhhcCCCCCccCCCCCCC
Q 046660 398 VSNNPREAYLNYRDLDIGTNNHGYTSYKQASIWGKKYFKNN-FDRLVHVKTTVDPHNFFRNEQSILP 463 (474)
Q Consensus 398 ~~~~~~~~Y~Ny~d~d~~~~~~~~~~~~~~~~~~~~yfg~n-~~RL~~IK~kyDP~~vF~~~q~I~~ 463 (474)
......++|+||+|.+. ..|.+.|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 403 ~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 403 GVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp TCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred ccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 42112478999998762 26899999986 9999999999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2e-41 Score=356.59 Aligned_cols=190 Identities=18% Similarity=0.308 Sum_probs=167.5
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHH--c-CCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCce------E
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQK--H-GLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEI------N 77 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~--~-~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i------~ 77 (474)
...|+......|.+|++|+|++||+++|++|++ + ++++.+||||||+.|.+...+ +++|||++||+| +
T Consensus 58 ~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~~~---gvvi~l~~m~~i~~~~~~~ 134 (534)
T 1w1o_A 58 STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPG---GVVVNMASLGDAAAPPRIN 134 (534)
T ss_dssp SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCTT---SEEEEGGGGGCSSSSCSEE
T ss_pred hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCCCC---eEEEECccccccccCccEE
Confidence 345766667799999999999999999999998 6 999999999999998777655 899999999984 8
Q ss_pred EcCCCCEEEEcCCCcHHHHHHHHHhcCCceeecCC-CCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe
Q 046660 78 VDAEEKTAWVQAGATLGQLYYRIAEGSKNLGFPAG-SCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD 156 (474)
Q Consensus 78 ~d~~~~~~~v~~G~~~~~~~~~l~~~~~~~~~~~g-~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~ 156 (474)
+|+++.+++||+|++|.+|++++.++| +..+.+ .+.+++|||.+.++|.|.++++||+.+|+|+++|||++||++++
T Consensus 135 ~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~ 212 (534)
T 1w1o_A 135 VSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVT 212 (534)
T ss_dssp ECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEE
T ss_pred EcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEE
Confidence 998889999999999999999999886 554443 33578899999999999999999999999999999999999996
Q ss_pred -ccCCCchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecc
Q 046660 157 -RKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTM 202 (474)
Q Consensus 157 -~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~ 202 (474)
+..+|+||||++||++ |+|||||+++||++|.|+....+.+.|..
T Consensus 213 ~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~~~~ 258 (534)
T 1w1o_A 213 CSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFVYTD 258 (534)
T ss_dssp EESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEEESC
T ss_pred ECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEEeCC
Confidence 5567899999999998 79999999999999999876666666653
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.5e-35 Score=306.63 Aligned_cols=197 Identities=21% Similarity=0.351 Sum_probs=165.0
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcC-----C
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQK-HGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDA-----E 81 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~-~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~-----~ 81 (474)
..|+......|.+|++|+|++||+++|++|++ +++++.+||||||+.|.+...+ +|+|||++||+|+||+ +
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~---gvvidl~~m~~i~i~~~~~~~~ 128 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG---GLVVDMSTTAENHFEVGYLSGG 128 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT---SEEEEGGGGTTSCEEEEECCSS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC---EEEEECcCCCCcEEeecccCCC
Confidence 34665566789999999999999999999996 9999999999999988776545 7999999999987776 5
Q ss_pred C--CEEEEcCCCcHHHHHHHHH-hcCCceeecC-CCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-
Q 046660 82 E--KTAWVQAGATLGQLYYRIA-EGSKNLGFPA-GSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD- 156 (474)
Q Consensus 82 ~--~~~~v~~G~~~~~~~~~l~-~~~~~~~~~~-g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~- 156 (474)
. .+++||||++|.++++++. ++| +..+. +.++.++|||.+.++|.|..+.+||..+|+|++++||++||++++
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~ 206 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTC 206 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEE
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEE
Confidence 5 7999999999999876644 776 54222 334567899999999999999999999999999999999999996
Q ss_pred ccCCCchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHH
Q 046660 157 RKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIV 210 (474)
Q Consensus 157 ~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 210 (474)
...+|+||||++||+. |+|||||+++||++|.|+......+.|...+++.+.+
T Consensus 207 ~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~ 259 (524)
T 2exr_A 207 SEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDA 259 (524)
T ss_dssp ESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHH
T ss_pred CCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHH
Confidence 4557899999999998 7999999999999999987666666665433333333
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.6e-35 Score=305.72 Aligned_cols=205 Identities=23% Similarity=0.289 Sum_probs=175.1
Q ss_pred ccccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCce-EEcCCCCE
Q 046660 6 QNFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEI-NVDAEEKT 84 (474)
Q Consensus 6 ~~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i-~~d~~~~~ 84 (474)
++..|+......|.+|++|+|++||+++|++|+++++|+.++|||||+.|.+.... ++++|||++||+| ++|+++.+
T Consensus 40 ~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~--ggvvIdl~~m~~i~~id~~~~~ 117 (476)
T 3pm9_A 40 YITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN--GEVVISLKRMDKIREIDTSSNT 117 (476)
T ss_dssp HHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS--SCEEEECTTCCCEEEEETTTTE
T ss_pred HhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC--CcEEEEeeCCCceEEEcCCCCe
Confidence 34567766678999999999999999999999999999999999999998776643 4899999999998 89999999
Q ss_pred EEEcCCCcHHHHHHHHHhcCCceeec--CCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe------
Q 046660 85 AWVQAGATLGQLYYRIAEGSKNLGFP--AGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD------ 156 (474)
Q Consensus 85 ~~v~~G~~~~~~~~~l~~~~~~~~~~--~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~------ 156 (474)
++||||++|.+|+++|.++| +.++ .+.+..++|||.+.+++.|+.+.+||..+|+|++++||++||++++
T Consensus 118 v~V~aGv~~~~l~~~l~~~G--l~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~ 195 (476)
T 3pm9_A 118 ITVEAGAILQRVQEKAAEVD--RLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLK 195 (476)
T ss_dssp EEEETTCBHHHHHHHHHHTT--EECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCS
T ss_pred EEECCCcCHHHHHHHHHHhC--CccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCccc
Confidence 99999999999999999987 5444 4666678899999999999999999999999999999999999995
Q ss_pred ccCCCchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHHHH
Q 046660 157 RKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEWQY 215 (474)
Q Consensus 157 ~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (474)
....++||+|+++|++ |+|||||+++||++|.|+......+.|+..+++.+++..++.
T Consensus 196 k~~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 196 KDNTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCCSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 1335689999999988 799999999999999998766666666544444555544443
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=2.8e-33 Score=289.10 Aligned_cols=198 Identities=19% Similarity=0.279 Sum_probs=166.8
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCce-EEcCCCC
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKH--GLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEI-NVDAEEK 83 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~--~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i-~~d~~~~ 83 (474)
-..|.. ....|.+|+.|+|++||+++|++|+++ ++++.++|+|||+.+.+...+ +++|||++||+| ++|++++
T Consensus 33 ~~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~---gvvIdl~~l~~i~~~d~~~~ 108 (481)
T 4feh_A 33 LTGWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG---GLVIDMTPLNTIHSIDADTK 108 (481)
T ss_dssp ECCTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT---SEEEECTTCCCEEEEETTTT
T ss_pred eecccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC---eEEEECccCCCceEEcCCCC
Confidence 456743 478999999999999999999999999 799999999999977655444 899999999998 9999999
Q ss_pred EEEEcCCCcHHHHHHHHHhcCCceeec--CCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-ccC-
Q 046660 84 TAWVQAGATLGQLYYRIAEGSKNLGFP--AGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RKS- 159 (474)
Q Consensus 84 ~~~v~~G~~~~~~~~~l~~~~~~~~~~--~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~- 159 (474)
+|+||+|+++.+|+++|.++| +.++ +|. +.++|||.+.+|++|..++.||..+|+|++++||++||++++ +..
T Consensus 109 ~v~v~aGv~l~~L~~~l~~~G--l~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~ 185 (481)
T 4feh_A 109 LVDIDAGVNLDQLMKAALPFG--LWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTG 185 (481)
T ss_dssp EEEEETTCBHHHHHHHHGGGT--EECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSS
T ss_pred EEEEcCCccHHHHHHHHHHcC--CEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCC
Confidence 999999999999999999987 4444 444 467899999999999999999999999999999999999996 555
Q ss_pred CCchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHHH
Q 046660 160 MGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEWQ 214 (474)
Q Consensus 160 ~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (474)
+|+|||||+|||+ |+|||||+++||++|.|+....... +.. .+..++++.+.
T Consensus 186 ~~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~-~~~-~~l~~~~~~~~ 237 (481)
T 4feh_A 186 EDAELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADG-DVT-ASLDETIALHS 237 (481)
T ss_dssp TTHHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEE-EEC-SSHHHHHHHHS
T ss_pred CChHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEE-EeC-CCHHHHHHHHH
Confidence 7899999999997 7999999999999998864322221 222 23455555554
No 15
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=1.5e-33 Score=302.79 Aligned_cols=202 Identities=22% Similarity=0.243 Sum_probs=172.0
Q ss_pred CCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCC--CCcEEEEEcCCCCce-EEcCCCCEEE
Q 046660 10 FSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSD--HVPFVIIDLIKLSEI-NVDAEEKTAW 86 (474)
Q Consensus 10 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~--~~~~~~idl~~~~~i-~~d~~~~~~~ 86 (474)
|+......|.+||+|+|++||+++|++|+++++++++||||||+.|.+.... ..++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 4555677999999999999999999999999999999999999876444321 025799999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-----ccCCC
Q 046660 87 VQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-----RKSMG 161 (474)
Q Consensus 87 v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-----~~~~~ 161 (474)
||||+++.+|.++|.++|..+.+.+++.....|||++.+++.|..+.+||...|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999985444445676777899999999999999999999999999999999999985 23467
Q ss_pred chhhhhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHH
Q 046660 162 EDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHE 212 (474)
Q Consensus 162 ~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 212 (474)
+||+|++.|+. |+|||||+++||++|.|+......+.|+..+++.+++..
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~ 407 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLRE 407 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHH
Confidence 89999999998 799999999999999999776666777644444444433
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2.9e-31 Score=271.58 Aligned_cols=176 Identities=21% Similarity=0.282 Sum_probs=155.9
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCce-EEcCCCCEE
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEI-NVDAEEKTA 85 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i-~~d~~~~~~ 85 (474)
-..|+......|.+|+.|+|++||+++|++| +++.++|||||+.+.+.... ++++|||++||+| ++|++++++
T Consensus 10 ~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~--~g~vi~l~~l~~i~~~d~~~~~v 83 (422)
T 2vfr_A 10 VTNWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGD--GGVLLSLAGLPSVVDVDTAARTV 83 (422)
T ss_dssp CBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCT--TCEEECSTTSCCCEEEETTTTEE
T ss_pred eecCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCC--CcEEEEhhhCCCcEEEcCCCCEE
Confidence 4578888888999999999999999999998 89999999999988766211 3899999999997 999999999
Q ss_pred EEcCCCcHHHHHHHHHhcCCceeecC-CCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-ccCCCch
Q 046660 86 WVQAGATLGQLYYRIAEGSKNLGFPA-GSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RKSMGED 163 (474)
Q Consensus 86 ~v~~G~~~~~~~~~l~~~~~~~~~~~-g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~d 163 (474)
+||||+++.+|.++|.++| +.++. +.++.++|||.+.+|++|.. .+||..+|+|++++||++||++++ +..+|+
T Consensus 84 ~v~aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~- 159 (422)
T 2vfr_A 84 RVGGGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER- 159 (422)
T ss_dssp EEETTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT-
T ss_pred EEcCCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC-
Confidence 9999999999999999987 55553 77788899999999999976 799999999999999999999996 444555
Q ss_pred hhhhhccccCcceeEEEEEEEEEeecCceEE
Q 046660 164 LFWAIRGGGGASFGVVVAWKVRLVTVPSTVT 194 (474)
Q Consensus 164 l~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~ 194 (474)
||+++|+. |++||||+++||++|.|+...
T Consensus 160 -f~~~~g~~-G~lGvit~~~l~l~p~~~~~~ 188 (422)
T 2vfr_A 160 -FGGAVTSL-GALGVVTSLTLDLEPAYEMEQ 188 (422)
T ss_dssp -GGGTSSCT-TTTCEEEEEEEECEECCEEEE
T ss_pred -cceEEecC-CCCEEEEEEEEEEEecCceEE
Confidence 99999987 799999999999999987543
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=3.7e-32 Score=286.83 Aligned_cols=197 Identities=20% Similarity=0.270 Sum_probs=164.5
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCC-CCcEEEEEcCCCCce-EEcCCCCEEEEcCCC
Q 046660 14 NTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSD-HVPFVIIDLIKLSEI-NVDAEEKTAWVQAGA 91 (474)
Q Consensus 14 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~-~~~~~~idl~~~~~i-~~d~~~~~~~v~~G~ 91 (474)
....|.+|++|+|++||+++|++|+++++++.++|||||+.|.+.... .+++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 356899999999999999999999999999999999999887655421 014899999999999 899999999999999
Q ss_pred cHHHHHHHHHhcCCceeecCCC--CCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe----ccCCCchhh
Q 046660 92 TLGQLYYRIAEGSKNLGFPAGS--CHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD----RKSMGEDLF 165 (474)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~g~--~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~----~~~~~~dl~ 165 (474)
++.+|+++|.++| +.++... ...++|||.+.+++.|+.+.+||..+|+|+++|||++||++++ +...++||+
T Consensus 214 ~~~~l~~~l~~~G--l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 214 MGPELEKQLHKQG--VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp BHHHHHHHHHHTT--EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred cHHHHHHHHHHcC--CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 9999999999987 5554433 3446899999999999999999999999999999999999885 345789999
Q ss_pred hhhccccCcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHH
Q 046660 166 WAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEW 213 (474)
Q Consensus 166 ~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (474)
|+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 292 ~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 292 HIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp HHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred hhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 9999998 7999999999999999987666666665433334444333
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.98 E-value=3.4e-31 Score=277.77 Aligned_cols=199 Identities=25% Similarity=0.356 Sum_probs=164.8
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC-CCCccCCCCcEEEEEcCCCCce-EEcCCCCEEEEcCCC
Q 046660 14 NTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFE-GLSYVSDHVPFVIIDLIKLSEI-NVDAEEKTAWVQAGA 91 (474)
Q Consensus 14 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~-~~~~~~~~~~~~~idl~~~~~i-~~d~~~~~~~v~~G~ 91 (474)
....|.+|++|+|++||+++|++|+++++|+.++|+|||+. |.+.... .++++|||++||+| ++|+++.+++||||+
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~-~~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQ-RGQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSS-TTCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCC-CCeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 35689999999999999999999999999999999999986 6544210 13899999999999 999999999999999
Q ss_pred cHHHHHHHHHhcCCceeecCC---CCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEec---cCCCchhh
Q 046660 92 TLGQLYYRIAEGSKNLGFPAG---SCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLDR---KSMGEDLF 165 (474)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~g---~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~---~~~~~dl~ 165 (474)
+|.+|+++|.++| +.++.+ ....+||||.++++|.|+. +||..+|+|+++|||++||++++. ..+|+|+|
T Consensus 132 ~~~~l~~~l~~~G--l~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~ 207 (520)
T 1wvf_A 132 TFGQMYDYIQENN--LPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTW 207 (520)
T ss_dssp CHHHHHHHHHHTT--CSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCT
T ss_pred CHHHHHHHHHHcC--CcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhH
Confidence 9999999999987 445444 2336789999999998886 999999999999999999999962 24678987
Q ss_pred hhhccccC---------cceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHHHHHH
Q 046660 166 WAIRGGGG---------ASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEWQYIA 217 (474)
Q Consensus 166 ~a~rG~g~---------~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (474)
++.|||.| ++|||||+++||++|.|+....+.+.|+..+++.+++..++.+.
T Consensus 208 ~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 208 QIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 77777643 59999999999999999876666777765455555555565553
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.97 E-value=3.5e-29 Score=264.26 Aligned_cols=200 Identities=17% Similarity=0.176 Sum_probs=162.8
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC-CCCcc-CCCCcEEEEEc-CCCCce-EEcCCCCEEEEcC
Q 046660 14 NTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFE-GLSYV-SDHVPFVIIDL-IKLSEI-NVDAEEKTAWVQA 89 (474)
Q Consensus 14 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~-~~~~~-~~~~~~~~idl-~~~~~i-~~d~~~~~~~v~~ 89 (474)
....|.+||+|+|++||+++|++|+++++|+.+||+||++. |.+.. .. ++|+||| ++||+| +||+++.+++|||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~--~gvvidl~~~mn~il~id~~~~~v~v~a 144 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS--GSVVLDMGKNMNRVLEVNVEGAYCVVEP 144 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST--TCEEEECTTTCCCEEEEETTTTEEEECT
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC--CEEEEEchHhcCCeEEEcCCCCEEEEeC
Confidence 35689999999999999999999999999999999999976 54442 21 3899999 999999 9999999999999
Q ss_pred CCcHHHHHHHHHhcCCc--eeecCCCCCcccccccccCCCCCCccccccccccceeEEEEEccCCcEEe-cc--CCCc--
Q 046660 90 GATLGQLYYRIAEGSKN--LGFPAGSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGRLLD-RK--SMGE-- 162 (474)
Q Consensus 90 G~~~~~~~~~l~~~~~~--~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~--~~~~-- 162 (474)
|+++.+|+++|.++|.. +.+.++..+..|+||.+.++|.|+. +||..+|+|++++||++||++++ .. ..++
T Consensus 145 Gv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~ 222 (560)
T 1e8g_A 145 GVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKR 222 (560)
T ss_dssp TCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCC
T ss_pred CCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccc
Confidence 99999999999999854 3333344445678999999988875 99999999999999999999996 22 2231
Q ss_pred -------------hhhhhhcccc----------CcceeEEEEEEEEEeecCceEEEEEEEecchHHHHHHHHHHHHHH
Q 046660 163 -------------DLFWAIRGGG----------GASFGVVVAWKVRLVTVPSTVTLFTVIRTMKQNATKIVHEWQYIA 217 (474)
Q Consensus 163 -------------dl~~a~rG~g----------~~~fGvvt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (474)
+++|+++++| +|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 223 ~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 223 PETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6777777542 379999999999999999877777777765455556666566554
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=8.7e-30 Score=262.88 Aligned_cols=181 Identities=16% Similarity=0.199 Sum_probs=149.9
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCC--CCcEEEEEcC-CCCceEEcCC--C
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSD--HVPFVIIDLI-KLSEINVDAE--E 82 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~--~~~~~~idl~-~~~~i~~d~~--~ 82 (474)
..|+......|.+|++|+|++||+++|++|+++++++.++|+|||+.+..+..+ .+++|+|||+ +||+|+||++ .
T Consensus 20 ~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~ 99 (540)
T 3js8_A 20 KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPV 99 (540)
T ss_dssp ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSS
T ss_pred eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCc
Confidence 458888888999999999999999999999999999999999999863222111 0248999995 7999999985 5
Q ss_pred CEEEEcCCCcHHHHHHHHHhcCCceeecC-CCCCcccccccccCCCCCCc----------cccccccccceeEEEEEccC
Q 046660 83 KTAWVQAGATLGQLYYRIAEGSKNLGFPA-GSCHTVGVGGHFSGGGYGFM----------MRKFGLAADHVVDAHLVDAE 151 (474)
Q Consensus 83 ~~~~v~~G~~~~~~~~~l~~~~~~~~~~~-g~~~~vgvgG~~~ggg~g~~----------~~~~G~~~d~v~~~~vv~~~ 151 (474)
.+|+||+|+++.+|+++|.++| +.++. +.++.++|||.+.+|++|.. +++||+.+|+|++++||++|
T Consensus 100 ~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~ad 177 (540)
T 3js8_A 100 AKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYD 177 (540)
T ss_dssp EEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEE
T ss_pred cEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCC
Confidence 7999999999999999999987 56652 33466889999999988886 68999999999999999999
Q ss_pred Cc-----EEeccCCCchhhhhhccccCcceeEEEEEEEEEeecCceE
Q 046660 152 GR-----LLDRKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTV 193 (474)
Q Consensus 152 G~-----~~~~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~ 193 (474)
|+ +++...+++||| ++|+|+ |+ ||||+++||++|.++..
T Consensus 178 G~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 178 KASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred CCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 98 665333689985 555555 45 69999999999988643
No 21
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=9.7e-29 Score=260.52 Aligned_cols=182 Identities=15% Similarity=0.162 Sum_probs=149.7
Q ss_pred cccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCC--CcEEEEEc-CCCCceEEcC--C
Q 046660 7 NFRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDH--VPFVIIDL-IKLSEINVDA--E 81 (474)
Q Consensus 7 ~~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~--~~~~~idl-~~~~~i~~d~--~ 81 (474)
...|+......|.+|+.|+|++||+++|++|+++++++.++|||||+.+.+...+. .++++||| ++||+|++|+ +
T Consensus 25 ~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i~vd~~~~ 104 (561)
T 2i0k_A 25 YQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGP 104 (561)
T ss_dssp EECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSS
T ss_pred HhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCceEecCcCC
Confidence 45788888889999999999999999999999999999999999998764433210 13899999 8999999998 7
Q ss_pred CCEEEEcCCCcHHHHHHHHHhcCCceeecCCC-CCcccccccccCCCCC---------Cc-cccccccccceeEEEEEcc
Q 046660 82 EKTAWVQAGATLGQLYYRIAEGSKNLGFPAGS-CHTVGVGGHFSGGGYG---------FM-MRKFGLAADHVVDAHLVDA 150 (474)
Q Consensus 82 ~~~~~v~~G~~~~~~~~~l~~~~~~~~~~~g~-~~~vgvgG~~~ggg~g---------~~-~~~~G~~~d~v~~~~vv~~ 150 (474)
+++|+||+|+++.+|+++|.++| +.++... .+.++|||.+..|++| ++ +.+||..+|+|++++||++
T Consensus 105 ~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~ 182 (561)
T 2i0k_A 105 VATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVW 182 (561)
T ss_dssp SCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEE
T ss_pred ccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeC
Confidence 88999999999999999999987 4444322 2446677777655555 44 5679999999999999999
Q ss_pred CCc---EEeccCCCchhhhhhccccCcceeEEEEEEEEEeecCceE
Q 046660 151 EGR---LLDRKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTV 193 (474)
Q Consensus 151 ~G~---~~~~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~ 193 (474)
||+ +++...+++||+|+++|.| + ||||+++||++|.++..
T Consensus 183 dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~ 225 (561)
T 2i0k_A 183 NGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQR 225 (561)
T ss_dssp CSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEE
T ss_pred CCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceE
Confidence 999 6653334799999999665 3 89999999999998754
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=7.4e-29 Score=259.88 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=161.7
Q ss_pred CCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCC----cEEEEEcCCCCce-EEcCCCCE
Q 046660 10 FSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHV----PFVIIDLIKLSEI-NVDAEEKT 84 (474)
Q Consensus 10 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~----~~~~idl~~~~~i-~~d~~~~~ 84 (474)
|+ .....|.+|++|+|++||+++|++|+++++++.++||||++.|.+...+ + ++++|||++||+| ++|+ .++
T Consensus 39 ~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~-~~~~r~gvvIdl~rmn~I~~id~-~~~ 115 (571)
T 1f0x_A 39 FR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNG-NDYDRDVVIISTLRLDKLHVLGK-GEQ 115 (571)
T ss_dssp SS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCB-SCCSSCEEEEECTTCCCEEEETT-TTE
T ss_pred cc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCC-cCCcCceEEEECcccCCceeECC-CCe
Confidence 54 2456899999999999999999999999999999999999987766542 1 2899999999999 7995 579
Q ss_pred EEEcCCCcHHHHHHHHHhcCCceeecC---CCCCcccccccccCCCCCCcccccccccc----------------ceeEE
Q 046660 85 AWVQAGATLGQLYYRIAEGSKNLGFPA---GSCHTVGVGGHFSGGGYGFMMRKFGLAAD----------------HVVDA 145 (474)
Q Consensus 85 ~~v~~G~~~~~~~~~l~~~~~~~~~~~---g~~~~vgvgG~~~ggg~g~~~~~~G~~~d----------------~v~~~ 145 (474)
|+|+||+++.+|+++|.++| +.++. +.|...+|||.+..++.|..+.+||..+| +|+++
T Consensus 116 v~v~aGv~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~l 193 (571)
T 1f0x_A 116 VLAYPGTTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGI 193 (571)
T ss_dssp EEECTTCBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSB
T ss_pred EEEcCCcCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeE
Confidence 99999999999999999987 54432 34445578999999999999999999999 99999
Q ss_pred EEEccCCcEEe-c-----------------cCCCc-----------------hhhhhh--ccccCcceeEEEEEEEEEee
Q 046660 146 HLVDAEGRLLD-R-----------------KSMGE-----------------DLFWAI--RGGGGASFGVVVAWKVRLVT 188 (474)
Q Consensus 146 ~vv~~~G~~~~-~-----------------~~~~~-----------------dl~~a~--rG~g~~~fGvvt~~~~~~~p 188 (474)
+||++||++++ . ...++ ||+|++ +|+. |+||| |++++|++|
T Consensus 194 evVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p 271 (571)
T 1f0x_A 194 DLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFE 271 (571)
T ss_dssp CCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEE
T ss_pred EEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEe
Confidence 99999999985 2 11223 888888 8887 79999 999999999
Q ss_pred cCceEEEEEEEecchHHHHHHHHHHH
Q 046660 189 VPSTVTLFTVIRTMKQNATKIVHEWQ 214 (474)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (474)
.|+....+.+.++..+++.+++..+.
T Consensus 272 ~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 272 AEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp CCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred cCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 99876666666654344444444333
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=3.2e-26 Score=223.72 Aligned_cols=163 Identities=20% Similarity=0.203 Sum_probs=134.5
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEEcCCCcH
Q 046660 14 NTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWVQAGATL 93 (474)
Q Consensus 14 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v~~G~~~ 93 (474)
....|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.+...+ +++|||++|+.|++|. .+++||||++|
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~---gvvI~l~~~~~I~~d~--~~v~v~aG~~~ 125 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR---GVILHLDLLQTIERNN--TQIVAMSGAKL 125 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE---EEEEECTTCCCEEEET--TEEEEETTSBH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC---eEEEECCCCCcEEECC--CEEEEecCcCH
Confidence 356899999999999999999999999999999999999875443333 8999999999999864 59999999999
Q ss_pred HHHHHHHHhcCC-ceeecCCCCCccccccccc--CCCCCCccccccccccceeEEEEEccCCcEEeccCCCchhhhhhcc
Q 046660 94 GQLYYRIAEGSK-NLGFPAGSCHTVGVGGHFS--GGGYGFMMRKFGLAADHVVDAHLVDAEGRLLDRKSMGEDLFWAIRG 170 (474)
Q Consensus 94 ~~~~~~l~~~~~-~~~~~~g~~~~vgvgG~~~--ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rG 170 (474)
.+|++++.++|. ++.++.|.+++|| |.+. .||+| |..+|+|++++||++||++++.. ++|++|++|+
T Consensus 126 ~~l~~~l~~~Gl~Gle~~~giPgTVG--Gav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~ 195 (322)
T 3tx1_A 126 IDTAKFALNESLSGLEFACGIPGSIG--GALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRF 195 (322)
T ss_dssp HHHHHHHHHTTEESCGGGTTCCSBHH--HHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-
T ss_pred HHHHHHHHHcCCcccccCCCCcchhH--HHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhh
Confidence 999999999985 4557888887765 4443 44443 78999999999999999999632 3699999998
Q ss_pred ccC-cceeEEEEEEEEEeecCc
Q 046660 171 GGG-ASFGVVVAWKVRLVTVPS 191 (474)
Q Consensus 171 ~g~-~~fGvvt~~~~~~~p~~~ 191 (474)
+.- +++||||+++||++|.|+
T Consensus 196 s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 196 STIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CTTTGGGCEEEEEEEECEECCH
T ss_pred cccCCCCEEEEEEEEEEEeCCH
Confidence 753 367999999999999864
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.92 E-value=5.1e-25 Score=216.69 Aligned_cols=160 Identities=19% Similarity=0.213 Sum_probs=131.6
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEEcCCCcH
Q 046660 14 NTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWVQAGATL 93 (474)
Q Consensus 14 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v~~G~~~ 93 (474)
....|.++++|+|++||+++|++|+++++|+.++|||||+.+.+...+ +++|||++||+|++|. .+++||||++|
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~---gvvI~l~~m~~i~id~--~~v~v~aGv~~ 119 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR---GIVISLLSLDHIEVSD--DAIIAGSGAAI 119 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE---EEEEECTTCCCEEEET--TEEEEETTSBH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC---eEEEEeCCCCceEEcC--CEEEEeCCCcH
Confidence 456899999999999999999999999999999999999875544334 8999999999999974 69999999999
Q ss_pred HHHHHHHHhcCC-ceeecCCCCCcccccccccCCCCCCcccccc-ccccceeEEEEEccCCcEEeccCCCchhhhhhccc
Q 046660 94 GQLYYRIAEGSK-NLGFPAGSCHTVGVGGHFSGGGYGFMMRKFG-LAADHVVDAHLVDAEGRLLDRKSMGEDLFWAIRGG 171 (474)
Q Consensus 94 ~~~~~~l~~~~~-~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rG~ 171 (474)
.+|++++.++|. +|.+.++..++ |||.+..+. +.|| ..+|+|++++||++||++++... .|++|++|+.
T Consensus 120 ~~l~~~l~~~Gl~gLe~~~~~Pgt--vGG~i~~na-----ggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~ 190 (326)
T 1hsk_A 120 IDVSRVARDYALTGLEFACGIPGS--IGGAVYMNA-----GAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNS 190 (326)
T ss_dssp HHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBC
T ss_pred HHHHHHHHHCCCccccccCCCcch--hhHHHhccc-----ccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCcccc
Confidence 999999999875 34455555543 556555433 3388 99999999999999999996322 3889999974
Q ss_pred c---CcceeEEEEEEEEEeec
Q 046660 172 G---GASFGVVVAWKVRLVTV 189 (474)
Q Consensus 172 g---~~~fGvvt~~~~~~~p~ 189 (474)
. .| ||||+++||++|.
T Consensus 191 ~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 191 IIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHHTT--CEEEEEEEECEEC
T ss_pred ccCCCC--EEEEEEEEEEEcC
Confidence 2 13 9999999999997
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=8.6e-25 Score=215.70 Aligned_cols=170 Identities=14% Similarity=0.053 Sum_probs=141.5
Q ss_pred cCCCCC-CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcC--CCCEE
Q 046660 9 RFSTAN-TPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDA--EEKTA 85 (474)
Q Consensus 9 r~~~~~-~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~--~~~~~ 85 (474)
+|++.. ...|.+++.|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+|+ |++|++++ +..++
T Consensus 21 ~~tt~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~---GvVI~l~-~~~i~v~~~~~~~~v 95 (357)
T 3i99_A 21 PYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT---GMIVVNR-LNGIEHQQDDDYHRL 95 (357)
T ss_dssp GGSTTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE---EEEEEEC-CCCEEEEECSSEEEE
T ss_pred hhccCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC---eEEEEcC-CCceEEeccCCceEE
Confidence 444443 45778999999999999999999999999999999999876544 44 8999998 99998853 45689
Q ss_pred EEcCCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccc-cccceeEEEEEcc-CCcEEeccCCCch
Q 046660 86 WVQAGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGL-AADHVVDAHLVDA-EGRLLDRKSMGED 163 (474)
Q Consensus 86 ~v~~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~d 163 (474)
+||+|+.|.+|.+++.++|. .|....+|+.| ++||+.+++.+.||. .+|+|++++||++ ||++++.. +.|
T Consensus 96 ~v~AG~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~d 167 (357)
T 3i99_A 96 HVAGGEDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEE 167 (357)
T ss_dssp EEETTSBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGG
T ss_pred EEeCCCcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHH
Confidence 99999999999999999984 24444445544 566899999999997 8999999999999 89999732 359
Q ss_pred hhhhhccccC----cceeEEEEEEEEEeecCc
Q 046660 164 LFWAIRGGGG----ASFGVVVAWKVRLVTVPS 191 (474)
Q Consensus 164 l~~a~rG~g~----~~fGvvt~~~~~~~p~~~ 191 (474)
++|++|++.. +++||||+++||++|.++
T Consensus 168 l~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 168 CQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp GCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9999998753 379999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.90 E-value=5e-23 Score=202.64 Aligned_cols=164 Identities=15% Similarity=0.073 Sum_probs=137.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceE-EcCCC-CEEEEcCCCc
Q 046660 15 TPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEIN-VDAEE-KTAWVQAGAT 92 (474)
Q Consensus 15 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~-~d~~~-~~~~v~~G~~ 92 (474)
...|.+++.|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+|+ |+++. ++.++ .+++||+|++
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~---GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR---GTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE---EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC---eEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 34689999999999999999999999999999999999776543 34 8999996 99985 56666 6899999999
Q ss_pred HHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCccccccc-cccceeEEEEEcc-CCcEEeccCCCchhhhhhcc
Q 046660 93 LGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFGL-AADHVVDAHLVDA-EGRLLDRKSMGEDLFWAIRG 170 (474)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~dl~~a~rG 170 (474)
|.+|.+++.++|. .|....+|+.| ++||+..++.+.||. .+|+|++++||++ +|++++.. +.|++|++|+
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~ 158 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRD 158 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTB
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCc
Confidence 9999999999874 34444455555 667999999999995 8999999999996 99998632 3599999998
Q ss_pred ccC----cceeEEEEEEEEEeecCc
Q 046660 171 GGG----ASFGVVVAWKVRLVTVPS 191 (474)
Q Consensus 171 ~g~----~~fGvvt~~~~~~~p~~~ 191 (474)
+.. +++||||+++||++|.+.
T Consensus 159 s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 159 SIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CccCCcCCCCEEEEEEEEEEEcCCC
Confidence 742 369999999999999753
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=1.6e-22 Score=192.12 Aligned_cols=160 Identities=19% Similarity=0.188 Sum_probs=129.7
Q ss_pred cCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCceEEcCCCCEEEEc
Q 046660 9 RFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSEINVDAEEKTAWVQ 88 (474)
Q Consensus 9 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~i~~d~~~~~~~v~ 88 (474)
+|++.....|+.++.|+|++||+++| ++|+.++|+|||..+.+.+.+ ++++|+|++|++|++|. +|+
T Consensus 13 ~~tt~~igg~a~vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~--~GvVI~l~~~~~I~vd~-----~v~ 79 (268)
T 2gqt_A 13 DYTTLGVGGPAELWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP--ERVIRLAGEFQTYDLKG-----WVG 79 (268)
T ss_dssp GGSSSCCCCEEEEEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS--SEEEEECGGGGCBCTTS-----EEE
T ss_pred HhcccccCcceEEEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC--CeEEEEcCCCCCcEEcC-----EEE
Confidence 45554444444499999999999999 899999999999876544332 38999999999998762 999
Q ss_pred CCCcHHHHHHHHHhcCCceeecCCCCCcccccccccCCCCCCcccccc-ccccceeEEEEEccCCcEEeccCCCchhhhh
Q 046660 89 AGATLGQLYYRIAEGSKNLGFPAGSCHTVGVGGHFSGGGYGFMMRKFG-LAADHVVDAHLVDAEGRLLDRKSMGEDLFWA 167 (474)
Q Consensus 89 ~G~~~~~~~~~l~~~~~~~~~~~g~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a 167 (474)
+|++|.+|.+++.++| | .|.+..+|+.| ++||+..++.+.|| ..+|+|++++|| +||++++.. +.|++|+
T Consensus 80 aG~~~~~l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~ 150 (268)
T 2gqt_A 80 AGTLLPLLVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFG 150 (268)
T ss_dssp TTSBHHHHHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCB
T ss_pred CCCCHHHHHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccc
Confidence 9999999999999987 3 25556666666 67889999999999 689999999999 999999732 3599999
Q ss_pred hccccCcceeEEEEEEEEEeecC
Q 046660 168 IRGGGGASFGVVVAWKVRLVTVP 190 (474)
Q Consensus 168 ~rG~g~~~fGvvt~~~~~~~p~~ 190 (474)
+|++.-..-||||+++||++|.+
T Consensus 151 YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 151 YRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp TTBCCCSTTCEEEEEEECCEECC
T ss_pred cCCCCcCCCceEEEEEEEEEeCC
Confidence 99876211149999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.82 E-value=3.4e-20 Score=171.15 Aligned_cols=115 Identities=23% Similarity=0.235 Sum_probs=98.1
Q ss_pred eEEcCCCCEEEEcCCCcHHHHHHHHHhcCCceeecC--CCCCcccccccccCCCCCCccccccccccceeEEEEEccCCc
Q 046660 76 INVDAEEKTAWVQAGATLGQLYYRIAEGSKNLGFPA--GSCHTVGVGGHFSGGGYGFMMRKFGLAADHVVDAHLVDAEGR 153 (474)
Q Consensus 76 i~~d~~~~~~~v~~G~~~~~~~~~l~~~~~~~~~~~--g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~ 153 (474)
++||+++.+++|++|+++.+|+++|.++| +.++. |.++. +|||++.+|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 47899999999999999999999998876 55554 44555 899999999988 899999 99999999999999
Q ss_pred EEe-cc-----CCCchhhhhhccccCcceeEEEEEEEEEeecCceEEEEEE
Q 046660 154 LLD-RK-----SMGEDLFWAIRGGGGASFGVVVAWKVRLVTVPSTVTLFTV 198 (474)
Q Consensus 154 ~~~-~~-----~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~~~~~~~~~~ 198 (474)
+++ +. ..++||||+++|++ |+|||||+++||++|.++....+.+
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEE
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEE
Confidence 985 22 24589999999987 7999999999999999886544433
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.82 E-value=4.1e-05 Score=73.36 Aligned_cols=153 Identities=19% Similarity=0.187 Sum_probs=97.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC---CccCCCCcEEEEEcCC---CCceEEcCCCCEEEEcCC
Q 046660 17 KPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL---SYVSDHVPFVIIDLIK---LSEINVDAEEKTAWVQAG 90 (474)
Q Consensus 17 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~---~~~~~~~~~~~idl~~---~~~i~~d~~~~~~~v~~G 90 (474)
.|-..+.|+|.+|+.++++. ++.+..+.+||++.... .... .+++||+++ |+.|+.+ ++.++||+|
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~---~~~lIdl~~i~eL~~i~~~--~~~l~iGA~ 75 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQ---PEHLIDINRIPELRGIREE--GSTVVIGAM 75 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCC---CSEEEECTTCGGGCCEEEE--TTEEEEETT
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCC---CCEEEECCCChhhcceEec--CCEEEEccC
Confidence 45568999999999999875 33578999999995321 1112 268999985 6777764 347999999
Q ss_pred CcHHHHHH--HHHhcCCceee----cCCCC--CcccccccccCCCCCCcccccccccccee-------EEEEEccCCcEE
Q 046660 91 ATLGQLYY--RIAEGSKNLGF----PAGSC--HTVGVGGHFSGGGYGFMMRKFGLAADHVV-------DAHLVDAEGRLL 155 (474)
Q Consensus 91 ~~~~~~~~--~l~~~~~~~~~----~~g~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~ 155 (474)
+++.++.+ .+.+.-.+|.. .+|.- ....|||.+..+.. ..|.+. .+++..++|+ .
T Consensus 76 ~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r 145 (287)
T 1ffv_C 76 TVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-R 145 (287)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-E
T ss_pred CcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-E
Confidence 99999995 34332112211 22221 12346788776521 345443 5888889993 3
Q ss_pred eccCCCchhhhhhccccCcceeEEEEEEEEEeec
Q 046660 156 DRKSMGEDLFWAIRGGGGASFGVVVAWKVRLVTV 189 (474)
Q Consensus 156 ~~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p~ 189 (474)
... -.|+|+.+|-..-..=.|||+++|...+.
T Consensus 146 ~i~--~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVP--ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEE--STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEE--HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 322 24888877621111125999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=96.87 E-value=0.0012 Score=63.04 Aligned_cols=152 Identities=17% Similarity=0.116 Sum_probs=91.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCC---CCccCCCCcEEEEEcCC---CCceEEcCCCCEEEEcCC
Q 046660 17 KPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEG---LSYVSDHVPFVIIDLIK---LSEINVDAEEKTAWVQAG 90 (474)
Q Consensus 17 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~---~~~~~~~~~~~~idl~~---~~~i~~d~~~~~~~v~~G 90 (474)
.|-..+.|+|.+|+.++++. ++-...+.+||++... ..... ..++||+++ |+.|+. +++.++||++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~---~~~lIdl~~i~eL~~I~~--~~~~l~IGA~ 75 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLAT---PEHLVDLRDIGDLVGIRE--EGTDVVIGAM 75 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCC---CSEEEECTTCGGGSCEEE--ETTEEEEETT
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCC---CCEEEECCCChhhcceEe--cCCEEEEccC
Confidence 45568999999999998863 2346888999999432 11112 258999987 466665 4458999999
Q ss_pred CcHHHHHH--HHHhcCCceeecCCCC--C----cccccccccCCCCCCcccccccccccee-------EEEEEccCCcEE
Q 046660 91 ATLGQLYY--RIAEGSKNLGFPAGSC--H----TVGVGGHFSGGGYGFMMRKFGLAADHVV-------DAHLVDAEGRLL 155 (474)
Q Consensus 91 ~~~~~~~~--~l~~~~~~~~~~~g~~--~----~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~ 155 (474)
+++.++.+ .+.++-..|.-..... + ...+||.+..+. -..|.+. .+++..++|+-.
T Consensus 76 ~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~ 146 (288)
T 1n62_C 76 TTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARI 146 (288)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEE
T ss_pred CcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEE
Confidence 99999984 4443211111100111 1 124788887762 1345543 566777888422
Q ss_pred eccCCCchhhhhhccccCcceeEEEEEEEEEee
Q 046660 156 DRKSMGEDLFWAIRGGGGASFGVVVAWKVRLVT 188 (474)
Q Consensus 156 ~~~~~~~dl~~a~rG~g~~~fGvvt~~~~~~~p 188 (474)
-.- .|+|...+--.-..=-|||++.+...+
T Consensus 147 v~~---~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 147 VAA---RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp EEH---HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EEH---HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 111 366665431110112689999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.46 E-value=0.002 Score=65.62 Aligned_cols=150 Identities=16% Similarity=0.117 Sum_probs=94.3
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC---CccCCCCcEEEEEcCC---CCceEEcCCCCEEEEcCCCcH
Q 046660 20 VIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL---SYVSDHVPFVIIDLIK---LSEINVDAEEKTAWVQAGATL 93 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~---~~~~~~~~~~~idl~~---~~~i~~d~~~~~~~v~~G~~~ 93 (474)
..+.|+|.+|+.++++.. . ...+.+||++.... .... ..++||+++ |+.|+.+ +..++||+++++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~---~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl 249 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRD---LPEVAFLSHCKDLAQIRET--PDGYGIGAGVTI 249 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCC---CCSEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCC---CCEEEEcCCChhhCcEEEc--CCEEEEccCCcH
Confidence 357899999999888742 2 56888999996532 1112 258999998 6778765 347999999999
Q ss_pred HHHHHHHHhcCC-ce----eecCCCC--CcccccccccCCCCCCcccccccccccee----EEEEEccCCcEEeccCCCc
Q 046660 94 GQLYYRIAEGSK-NL----GFPAGSC--HTVGVGGHFSGGGYGFMMRKFGLAADHVV----DAHLVDAEGRLLDRKSMGE 162 (474)
Q Consensus 94 ~~~~~~l~~~~~-~~----~~~~g~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~----~~~vv~~~G~~~~~~~~~~ 162 (474)
.++.+.+.+ .. .| ...++.- ....|||.+..+-. .+-...-++ .+++..++|+ .... -.
T Consensus 250 ~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~ 319 (462)
T 2w3s_A 250 AALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMP--LE 319 (462)
T ss_dssp HHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCB--GG
T ss_pred HHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEE--HH
Confidence 999987433 22 11 1112211 11346788877542 344455566 7788888884 2211 24
Q ss_pred hhhhhhccccCcceeEEEEEEEEEee
Q 046660 163 DLFWAIRGGGGASFGVVVAWKVRLVT 188 (474)
Q Consensus 163 dl~~a~rG~g~~~fGvvt~~~~~~~p 188 (474)
|+|..+|----..=-|||+++|...+
T Consensus 320 dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 320 DFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp GGEEETTEESCCTTCEEEEEEEESCC
T ss_pred HhhcccccccCCCCcEEEEEEEecCC
Confidence 78876652110111599999987654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.08 E-value=0.12 Score=49.10 Aligned_cols=150 Identities=17% Similarity=0.086 Sum_probs=87.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC---CccCCCCcEEEEEcCCC---CceEEcCCCCEEEEcC
Q 046660 16 PKPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL---SYVSDHVPFVIIDLIKL---SEINVDAEEKTAWVQA 89 (474)
Q Consensus 16 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~---~~~~~~~~~~~idl~~~---~~i~~d~~~~~~~v~~ 89 (474)
+.|--.+.|+|.+|..++++- +-...+.+||++.... .... ...+||++++ +.|+. +++.++||+
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~---~~~lIdl~~i~eL~~I~~--~~~~l~IGA 73 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY---PSCLVDLRNVSELFEISQ--SAGILSVGA 73 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC---CSEEEECTTCGGGGCEEE--ETTEEEEET
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC---CCEEEECCCChhhcCeEE--cCCEEEEcC
Confidence 345567999999999998863 2346778999994321 1111 2488999985 55655 456899999
Q ss_pred CCcHHHHHH--HHHhcCCceee--c-CCCC---CcccccccccCCCCCCcccccccccccee-------EEEEEccCCcE
Q 046660 90 GATLGQLYY--RIAEGSKNLGF--P-AGSC---HTVGVGGHFSGGGYGFMMRKFGLAADHVV-------DAHLVDAEGRL 154 (474)
Q Consensus 90 G~~~~~~~~--~l~~~~~~~~~--~-~g~~---~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~ 154 (474)
++++.++.+ .+.++-..|.- . .|.. ....+||.+..+-. ..|... .+++..++|+-
T Consensus 74 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p---------~sD~~~~L~Al~A~v~l~~~~g~R 144 (288)
T 1t3q_C 74 MVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA---------GAEMPFLMATLGATMYIASSAGVR 144 (288)
T ss_dssp TCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEE
T ss_pred CCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC---------cHHHHHHHHHcCcEEEEEcCCceE
Confidence 999999986 34332111110 0 1111 12246788764411 356554 66777778752
Q ss_pred EeccCCCchhhhhhcc-ccCcceeEEEEEEEEEe
Q 046660 155 LDRKSMGEDLFWAIRG-GGGASFGVVVAWKVRLV 187 (474)
Q Consensus 155 ~~~~~~~~dl~~a~rG-~g~~~fGvvt~~~~~~~ 187 (474)
.-.- .|+|-..+- .- ..=-|||++.+...
T Consensus 145 ~vp~---~dF~~g~~~t~L-~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 145 SVSA---TDFMKGHYFTDL-EAGEVLVRVEIPIP 174 (288)
T ss_dssp EEEH---HHHEEETTEESC-CTTCEEEEEEEECC
T ss_pred EEEH---HHHhcCcccccC-CCCCEEEEEEecCC
Confidence 2111 255543321 11 11258999988644
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=92.66 E-value=0.15 Score=48.87 Aligned_cols=76 Identities=9% Similarity=-0.002 Sum_probs=54.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC---CccCCCCcEEEEEcCCC---CceEEcCCCCEEEEcCC
Q 046660 17 KPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL---SYVSDHVPFVIIDLIKL---SEINVDAEEKTAWVQAG 90 (474)
Q Consensus 17 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~---~~~~~~~~~~~idl~~~---~~i~~d~~~~~~~v~~G 90 (474)
.+...+.|+|.+|..++++- +. ...+.+||++.... .... ...+||++++ +.|+. +++.++||++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~---~~~lIdl~~i~eL~~I~~--~~~~l~IGA~ 79 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL---FPMIICPAWIPELNAVEH--GPEGISFGAA 79 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC---CSEEEECTTCGGGGCEEE--CSSEEEEETT
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC---CCEEEECCCChhhcceEE--CCCeEEEccC
Confidence 45677999999999887643 22 35778999985421 1111 2589999975 45555 4568999999
Q ss_pred CcHHHHHHHHH
Q 046660 91 ATLGQLYYRIA 101 (474)
Q Consensus 91 ~~~~~~~~~l~ 101 (474)
+++.++.+.+.
T Consensus 80 vt~~~l~~~~~ 90 (305)
T 3nvz_B 80 CALSSVEKTLL 90 (305)
T ss_dssp CBHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999988764
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.78 E-value=0.16 Score=48.36 Aligned_cols=73 Identities=26% Similarity=0.277 Sum_probs=51.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHHHcCC-cEEEEcCCCCCCC---CCccCCCCcEEEEEcCCC---CceEEcCCCCEEEEcCC
Q 046660 18 PQVIITPLHVSHVQAAIKCSQKHGL-QIRIRSGGHDFEG---LSYVSDHVPFVIIDLIKL---SEINVDAEEKTAWVQAG 90 (474)
Q Consensus 18 p~~vv~p~~~~dv~~~v~~a~~~~~-~~~v~~gGh~~~~---~~~~~~~~~~~~idl~~~---~~i~~d~~~~~~~v~~G 90 (474)
|-..+.|+|.+|..++++ +++- ...+.+||++... ..... ...+||++++ +.|+. +++.++||++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~---~~~lIdl~~i~eL~~I~~--~~~~l~IGA~ 74 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEK---PDVVIDIKKLKELEYIRV--EENTIHIGAL 74 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCC---CSEEEECTTCGGGCCEEE--CSSEEEEETT
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCC---CCeEEEcccChhhcceEE--cCCeEEEccC
Confidence 456789999999887764 3332 4677899998532 11111 2588999986 45554 4568999999
Q ss_pred CcHHHHHH
Q 046660 91 ATLGQLYY 98 (474)
Q Consensus 91 ~~~~~~~~ 98 (474)
+++.++.+
T Consensus 75 vt~~~l~~ 82 (296)
T 3hrd_C 75 STFTQIEN 82 (296)
T ss_dssp CBHHHHHH
T ss_pred CcHHHHHh
Confidence 99999974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=85.94 E-value=0.92 Score=43.62 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=52.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCC---CCccCCCCcEEEEEcCCC---CceEEcCCCCEEEEcCC
Q 046660 17 KPQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEG---LSYVSDHVPFVIIDLIKL---SEINVDAEEKTAWVQAG 90 (474)
Q Consensus 17 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~---~~~~~~~~~~~~idl~~~---~~i~~d~~~~~~~v~~G 90 (474)
.|--.+.|+|.+|..++++ + -.-.+.+||++... ..... ...+||++++ +.|+.+++ +.++||++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~---p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~ 75 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGH---PAALVDLTGIDGLATISTLAD-GSLRIGAG 75 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCC---CSEEEECTTSTTTTCEEECTT-SCEEEETT
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCC---CCEEEECCCChhhcceEECCC-CeEEEccC
Confidence 4556789999999998876 2 24778899998532 11112 2589999876 55665433 36999999
Q ss_pred CcHHHHHHH
Q 046660 91 ATLGQLYYR 99 (474)
Q Consensus 91 ~~~~~~~~~ 99 (474)
+++.|+.+.
T Consensus 76 vt~~~l~~~ 84 (324)
T 1rm6_B 76 ATLEAIAEH 84 (324)
T ss_dssp CBHHHHHHC
T ss_pred CcHHHHHhC
Confidence 999999863
No 36
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=85.86 E-value=1.2 Score=47.46 Aligned_cols=29 Identities=41% Similarity=0.597 Sum_probs=24.1
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCCCCCccC
Q 046660 429 IWGKKYFK-NNFDRLVHVKTTVDPHNFFRN 457 (474)
Q Consensus 429 ~~~~~yfg-~n~~RL~~IK~kyDP~~vF~~ 457 (474)
.|-..+|| ..++.|++||+.|||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 46666776 479999999999999999964
No 37
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=85.02 E-value=0.97 Score=46.59 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=24.1
Q ss_pred hhhhhcccc-HHHHHHhhhhcCCCCCccCCCCC
Q 046660 430 WGKKYFKNN-FDRLVHVKTTVDPHNFFRNEQSI 461 (474)
Q Consensus 430 ~~~~yfg~n-~~RL~~IK~kyDP~~vF~~~q~I 461 (474)
|...+||++ ++-+++||+.+||+|+|+-..-+
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~ 513 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSG 513 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCC
Confidence 447778765 55559999999999999754433
No 38
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=65.84 E-value=6.5 Score=40.99 Aligned_cols=29 Identities=21% Similarity=0.432 Sum_probs=18.7
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCCCCCccC
Q 046660 429 IWGKKYFK-NNFDRLVHVKTTVDPHNFFRN 457 (474)
Q Consensus 429 ~~~~~yfg-~n~~RL~~IK~kyDP~~vF~~ 457 (474)
.|....+| ..++=+++||+.+||+|+|+-
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 35555555 468999999999999999864
No 39
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=65.42 E-value=4.5 Score=46.46 Aligned_cols=77 Identities=9% Similarity=0.036 Sum_probs=52.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCC-ccCCCCcEEEEEcCCCC---ceEEcCCCCEEEEcCCCcH
Q 046660 18 PQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLS-YVSDHVPFVIIDLIKLS---EINVDAEEKTAWVQAGATL 93 (474)
Q Consensus 18 p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~-~~~~~~~~~~idl~~~~---~i~~d~~~~~~~v~~G~~~ 93 (474)
+...++|.|.+|+.+++.- +. .-.+.+||++..-.- .... ....+||++++. .|+. +...++||+++++
T Consensus 233 ~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~~~k~~~~-~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vtl 305 (1332)
T 3unc_A 233 RVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQ-LFPMIICPAWIPELNAVEH--GPEGISFGAACAL 305 (1332)
T ss_dssp SCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCC-CCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred ceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHHHhhcCCC-CCCeEEEcCCCHHhCceEE--eCCEEEEEecChH
Confidence 3457899999999887653 21 246779998843210 0000 124789999854 5555 4567999999999
Q ss_pred HHHHHHHH
Q 046660 94 GQLYYRIA 101 (474)
Q Consensus 94 ~~~~~~l~ 101 (474)
.++.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988664
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=56.17 E-value=4.6 Score=41.94 Aligned_cols=22 Identities=32% Similarity=0.558 Sum_probs=20.6
Q ss_pred ccHHHHHHhhhhcCCCCCccCC
Q 046660 437 NNFDRLVHVKTTVDPHNFFRNE 458 (474)
Q Consensus 437 ~n~~RL~~IK~kyDP~~vF~~~ 458 (474)
+++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999875
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=49.84 E-value=16 Score=37.84 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=20.4
Q ss_pred ccHHHHHHhhhhcCCCCCccCCCCC
Q 046660 437 NNFDRLVHVKTTVDPHNFFRNEQSI 461 (474)
Q Consensus 437 ~n~~RL~~IK~kyDP~~vF~~~q~I 461 (474)
..++-+++||+.+||+|+|+-..-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 4688899999999999999765333
No 42
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=47.96 E-value=6.4 Score=40.48 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=21.2
Q ss_pred cccHHHHHHhhhhcCCCCCccCC
Q 046660 436 KNNFDRLVHVKTTVDPHNFFRNE 458 (474)
Q Consensus 436 g~n~~RL~~IK~kyDP~~vF~~~ 458 (474)
|++++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 43
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=44.89 E-value=11 Score=39.24 Aligned_cols=27 Identities=19% Similarity=0.069 Sum_probs=20.3
Q ss_pred cccHHHHHHhhhhcCCCCCccCCCCCCC
Q 046660 436 KNNFDRLVHVKTTVDPHNFFRNEQSILP 463 (474)
Q Consensus 436 g~n~~RL~~IK~kyDP~~vF~~~q~I~~ 463 (474)
+...+ |++||+.+||.|+|+-..-+.|
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 44444 9999999999999986544443
No 44
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=42.07 E-value=25 Score=28.20 Aligned_cols=43 Identities=14% Similarity=0.264 Sum_probs=35.7
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGHD 52 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh~ 52 (474)
.+|.. ...|..|+.+.+++++.++.+-|++.|++. .|+-.|+.
T Consensus 47 ~~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 47 NEWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 34643 468999999999999999999999999996 67777763
No 45
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=39.25 E-value=54 Score=26.22 Aligned_cols=43 Identities=16% Similarity=0.133 Sum_probs=35.7
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGHD 52 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh~ 52 (474)
.+|. ....|..|+.+.+++++.++.+-|++.|++. .|+-.|+.
T Consensus 48 ~~W~--~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 48 EAWF--REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 3464 3568999999999999999999999999996 67777773
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=35.85 E-value=49 Score=26.57 Aligned_cols=43 Identities=9% Similarity=0.177 Sum_probs=35.5
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGHD 52 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh~ 52 (474)
.+|.. ...+..|+.+.|++++.++.+-|++.|++. .|+-.|+.
T Consensus 41 ~~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 41 RKWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HHTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 45743 457899999999999999999999999996 66777765
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=34.45 E-value=62 Score=25.64 Aligned_cols=43 Identities=5% Similarity=0.175 Sum_probs=35.6
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGHD 52 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh~ 52 (474)
.+|. ....|..|+.+.+++++.++.+-|++.|++. .|+-.|+.
T Consensus 44 ~~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 44 NEWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 3564 3568999999999999999999999999986 66667764
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=34.44 E-value=59 Score=25.69 Aligned_cols=43 Identities=16% Similarity=0.235 Sum_probs=34.0
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGHD 52 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh~ 52 (474)
.+|. ....|..|+.+.+++++.++.+-|++.|++. .++-.|+.
T Consensus 42 ~~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 42 DEWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 3564 3568999999999999999999999999986 56666653
No 49
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=30.56 E-value=30 Score=39.82 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=48.9
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC---CCCccCCCCcEEEEEcCCCCce-EEcCCCCEEEEcCCCcHHH
Q 046660 20 VIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFE---GLSYVSDHVPFVIIDLIKLSEI-NVDAEEKTAWVQAGATLGQ 95 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~---~~~~~~~~~~~~~idl~~~~~i-~~d~~~~~~~v~~G~~~~~ 95 (474)
..+.|.|.+|+.++.. +.-+.++ ..|+++.. -.-... -.++||+++...+ .|..++..++||+++++.+
T Consensus 242 ~w~~P~tl~el~~l~~--~~p~a~l--vaGnT~~gl~~~~~~~~---~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~ 314 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKM--KHPSAPL--VIGNTYLGLHMKFTDVS---YPIIISPARILELFVVTNTKQGLTLGTGLSLTQ 314 (1335)
T ss_dssp EEEECSSHHHHHHHHH--HCTTSCB--CSSCTTHHHHHC--CCC---CSEEECCTTCGGGSCEECCTTEEEEETTCBHHH
T ss_pred eEecCCCHHHHHHHHH--HCCCCeE--EEecccceeeEeecCCC---CCeEEEcCcchhHheEEecCCEEEEcccCcHHH
Confidence 4689999999988744 2223443 35555521 111111 2488999875554 3445566899999999999
Q ss_pred HHHHHHh
Q 046660 96 LYYRIAE 102 (474)
Q Consensus 96 ~~~~l~~ 102 (474)
+.+.|.+
T Consensus 315 ~~~~l~~ 321 (1335)
T 3zyv_A 315 VKNVLSD 321 (1335)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887764
No 50
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.51 E-value=1e+02 Score=22.96 Aligned_cols=33 Identities=9% Similarity=0.171 Sum_probs=25.4
Q ss_pred ceEEcCCCCEEEEcCCCcHHHHHHHHHhcCCce
Q 046660 75 EINVDAEEKTAWVQAGATLGQLYYRIAEGSKNL 107 (474)
Q Consensus 75 ~i~~d~~~~~~~v~~G~~~~~~~~~l~~~~~~~ 107 (474)
.+++|...+.++|..-+...++.+.+.+.|+..
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 80 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQA 80 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCE
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCce
Confidence 456777788888876678889999998887643
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=29.81 E-value=91 Score=24.64 Aligned_cols=42 Identities=17% Similarity=0.330 Sum_probs=34.5
Q ss_pred ccCCCCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCC
Q 046660 8 FRFSTANTPKPQVIITPLHVSHVQAAIKCSQKHGLQI-RIRSGGH 51 (474)
Q Consensus 8 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~v~~gGh 51 (474)
.+|.. ...|..++...+++++.++.+-|++.|++. .|+-.|+
T Consensus 44 ~~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 44 KQWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 35644 456999999999999999999999999985 5666666
No 52
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=29.49 E-value=91 Score=26.19 Aligned_cols=39 Identities=23% Similarity=0.364 Sum_probs=32.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCC
Q 046660 19 QVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLS 57 (474)
Q Consensus 19 ~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~ 57 (474)
...+.|.+.++|.++++.+.+.+.-+.+.+||.+.....
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D 85 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKN 85 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence 356889999999999999988668899999998765443
No 53
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.77 E-value=1.2e+02 Score=25.65 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=30.8
Q ss_pred EEEEcCCHHHHHHHHHHHHHc-CCcEEEEcCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKH-GLQIRIRSGGHDFEG 55 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~-~~~~~v~~gGh~~~~ 55 (474)
..+.|.+.++|.++|+.+.+. +.-+.+.+||.+...
T Consensus 47 ~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 47 KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC
Confidence 467899999999999999886 688999999987654
No 54
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=25.33 E-value=82 Score=23.57 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=28.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccCCCCcEEEEEcCCCCc
Q 046660 18 PQVIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGLSYVSDHVPFVIIDLIKLSE 75 (474)
Q Consensus 18 p~~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~~~~~~~~~~~~idl~~~~~ 75 (474)
--.++.|++-+|++++++..++.. .|+|||+.|+.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~-----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGD-----------------------AVVFDMSLLSR 40 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTC-----------------------CEEEECTTSCH
T ss_pred EEEEEecCcHHHHHHHHHHHHCCC-----------------------EEEEECCCCCH
Confidence 357899999999999999877632 58899988864
No 55
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.00 E-value=1.3e+02 Score=25.82 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=30.6
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL 56 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~ 56 (474)
..+.|.+.++|.++|+.+.+.+.-+.+.+||.+....
T Consensus 68 ~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~ 104 (185)
T 3rfq_A 68 VVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPR 104 (185)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred EEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCc
Confidence 4578999999999999887667889999999876443
No 56
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=23.91 E-value=26 Score=27.53 Aligned_cols=14 Identities=21% Similarity=0.517 Sum_probs=11.7
Q ss_pred HHhhhhcCCCCCcc
Q 046660 443 VHVKTTVDPHNFFR 456 (474)
Q Consensus 443 ~~IK~kyDP~~vF~ 456 (474)
.+|++||||++-+.
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 56789999999875
No 57
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=23.19 E-value=1.4e+02 Score=24.88 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=30.9
Q ss_pred EEEEcCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQK-HGLQIRIRSGGHDFEGL 56 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~-~~~~~~v~~gGh~~~~~ 56 (474)
..+.|.+.++|.++|+.+.+ .+.-+.+.+||.+....
T Consensus 49 ~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~ 86 (167)
T 1uuy_A 49 TAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPR 86 (167)
T ss_dssp EEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTT
T ss_pred EEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 46789999999999999876 57889999999876543
No 58
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=22.81 E-value=1.5e+02 Score=24.73 Aligned_cols=36 Identities=14% Similarity=0.325 Sum_probs=30.5
Q ss_pred EEEEcCCHHHHHHHHHHHHHc-CCcEEEEcCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKH-GLQIRIRSGGHDFEG 55 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~-~~~~~v~~gGh~~~~ 55 (474)
..+.|.+.+++.++|+.+.+. +.-+.+.+||.+...
T Consensus 40 ~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 76 (164)
T 2is8_A 40 YELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAP 76 (164)
T ss_dssp EEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred EEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 467899999999999998875 688999999987644
No 59
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.66 E-value=83 Score=22.92 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=28.1
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHD 52 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~ 52 (474)
+|-..++.+||..+|+-.+.+|-|++|--.|-+
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 466788999999999999999999888777655
No 60
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=22.64 E-value=1.4e+02 Score=25.46 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=30.2
Q ss_pred EEEEcCCHHHHHHHHHHHHHc-CCcEEEEcCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKH-GLQIRIRSGGHDFEG 55 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~-~~~~~v~~gGh~~~~ 55 (474)
..+.|.+.++|.++|+.+.+. +.-+.+.+||.+...
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred EEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 457899999999999988776 588999999987644
No 61
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.49 E-value=1.1e+02 Score=25.56 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=29.4
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC
Q 046660 20 VIITPLHVSHVQAAIKCSQKHGLQIRIRSGGHDFEGL 56 (474)
Q Consensus 20 ~vv~p~~~~dv~~~v~~a~~~~~~~~v~~gGh~~~~~ 56 (474)
..+.|.+ +++.++++.+.+.+.-+.+.+||.+....
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~~ 81 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAPT 81 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred EEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 3467899 99999999887767889999999876543
No 62
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=22.27 E-value=97 Score=28.69 Aligned_cols=21 Identities=5% Similarity=-0.083 Sum_probs=15.1
Q ss_pred EEcCCCcHHHHHHHHHhcCCc
Q 046660 86 WVQAGATLGQLYYRIAEGSKN 106 (474)
Q Consensus 86 ~v~~G~~~~~~~~~l~~~~~~ 106 (474)
.-++|....++...+...+.+
T Consensus 150 vsqSG~l~~~~~~~~~~~g~G 170 (288)
T 2nu8_A 150 VSRSGTLTYEAVKQTTDYGFG 170 (288)
T ss_dssp EESCHHHHHHHHHHHHHTTCC
T ss_pred EECcHHHHHHHHHHHHhcCCC
Confidence 347888888888888776643
No 63
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.18 E-value=56 Score=31.63 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEE--EcCCCC
Q 046660 25 LHVSHVQAAIKCSQKHGLQIRI--RSGGHD 52 (474)
Q Consensus 25 ~~~~dv~~~v~~a~~~~~~~~v--~~gGh~ 52 (474)
=|.+||.++|++|+++++.|.+ -.=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 5889999999999999999864 455776
No 64
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=21.14 E-value=31 Score=27.30 Aligned_cols=14 Identities=21% Similarity=0.418 Sum_probs=11.3
Q ss_pred HHhhhhcCCCCCcc
Q 046660 443 VHVKTTVDPHNFFR 456 (474)
Q Consensus 443 ~~IK~kyDP~~vF~ 456 (474)
.+|++||||++-+.
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 35689999999875
No 65
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=20.71 E-value=43 Score=19.57 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=15.9
Q ss_pred ccccHHHHHHhhhhcCCCC
Q 046660 435 FKNNFDRLVHVKTTVDPHN 453 (474)
Q Consensus 435 fg~n~~RL~~IK~kyDP~~ 453 (474)
|.+-++|-|+|-+|.+++.
T Consensus 10 FadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 10 FKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 4578999999999998764
Done!