Query 046667
Match_columns 540
No_of_seqs 456 out of 1431
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 03:15:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046667.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046667hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0252 Inorganic phosphate tr 100.0 2E-48 4.3E-53 354.3 29.8 479 18-521 36-515 (538)
2 TIGR00887 2A0109 phosphate:H+ 100.0 7.8E-45 1.7E-49 365.8 44.8 491 10-516 3-501 (502)
3 TIGR01299 synapt_SV2 synaptic 100.0 2.8E-42 6.1E-47 350.7 43.4 451 11-510 155-740 (742)
4 KOG0569 Permease of the major 100.0 1.7E-41 3.7E-46 323.4 34.4 453 17-521 5-472 (485)
5 PRK10077 xylE D-xylose transpo 100.0 1.6E-39 3.6E-44 327.2 41.6 460 17-520 6-474 (479)
6 COG2271 UhpC Sugar phosphate p 100.0 8.5E-40 1.8E-44 297.0 25.5 405 14-501 20-431 (448)
7 PRK10642 proline/glycine betai 100.0 8.5E-38 1.8E-42 313.5 39.9 414 22-510 15-436 (490)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1E-37 2.3E-42 305.7 35.0 402 19-493 4-410 (412)
9 TIGR00879 SP MFS transporter, 100.0 5E-37 1.1E-41 310.1 37.0 439 19-511 24-478 (481)
10 PRK09556 uhpT sugar phosphate 100.0 2.6E-37 5.7E-42 308.5 31.1 430 5-503 11-448 (467)
11 PRK11551 putative 3-hydroxyphe 100.0 7.4E-36 1.6E-40 294.0 38.6 387 16-503 8-395 (406)
12 PRK12307 putative sialic acid 100.0 1.3E-35 2.7E-40 294.3 37.7 369 19-465 14-382 (426)
13 PRK10406 alpha-ketoglutarate t 100.0 2.2E-35 4.8E-40 291.8 38.3 416 1-503 1-423 (432)
14 PRK11663 regulatory protein Uh 100.0 7.6E-36 1.6E-40 295.1 34.8 407 17-508 17-429 (434)
15 PRK09952 shikimate transporter 100.0 3.8E-35 8.2E-40 290.0 39.7 407 20-506 19-435 (438)
16 TIGR00898 2A0119 cation transp 100.0 3.4E-36 7.4E-41 304.7 32.4 383 44-512 110-503 (505)
17 COG2814 AraJ Arabinose efflux 100.0 8.1E-35 1.8E-39 269.2 36.2 377 18-504 8-386 (394)
18 TIGR00891 2A0112 putative sial 100.0 6.8E-35 1.5E-39 287.7 37.8 384 17-466 6-390 (405)
19 KOG0254 Predicted transporter 100.0 3E-35 6.6E-40 296.0 35.2 440 19-521 41-501 (513)
20 KOG0253 Synaptic vesicle trans 100.0 3.8E-34 8.3E-39 253.0 37.4 434 8-510 63-526 (528)
21 PRK03893 putative sialic acid 100.0 2.9E-34 6.3E-39 290.3 36.7 406 18-495 15-444 (496)
22 PRK03545 putative arabinose tr 100.0 1E-33 2.2E-38 276.7 38.6 374 19-504 5-380 (390)
23 PRK09705 cynX putative cyanate 100.0 1.6E-33 3.5E-38 274.7 37.1 378 21-510 8-388 (393)
24 PRK15075 citrate-proton sympor 100.0 2.2E-33 4.8E-38 277.7 37.4 367 21-468 13-396 (434)
25 TIGR00903 2A0129 major facilit 100.0 1.6E-33 3.4E-38 270.0 34.5 357 36-504 4-365 (368)
26 TIGR00895 2A0115 benzoate tran 100.0 1.7E-33 3.6E-38 277.1 34.9 389 14-463 8-397 (398)
27 PRK11273 glpT sn-glycerol-3-ph 100.0 4.1E-33 9E-38 277.1 36.8 417 18-516 24-447 (452)
28 PRK14995 methyl viologen resis 100.0 7E-33 1.5E-37 278.1 38.7 383 20-466 3-413 (495)
29 PLN00028 nitrate transmembrane 100.0 5.8E-33 1.3E-37 276.7 36.3 401 11-504 24-433 (476)
30 PF00083 Sugar_tr: Sugar (and 100.0 1.9E-40 4.2E-45 331.2 -17.6 435 27-517 4-450 (451)
31 PRK05122 major facilitator sup 100.0 8.9E-33 1.9E-37 271.4 35.0 377 23-509 15-394 (399)
32 PRK03699 putative transporter; 100.0 2E-32 4.2E-37 267.7 32.5 377 20-505 4-381 (394)
33 TIGR00893 2A0114 d-galactonate 100.0 8.4E-33 1.8E-37 272.2 30.0 387 32-501 3-396 (399)
34 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-32 2.5E-37 269.1 30.1 368 26-497 7-375 (377)
35 TIGR00894 2A0114euk Na(+)-depe 100.0 1.2E-32 2.5E-37 275.6 29.7 415 16-504 12-450 (465)
36 TIGR00892 2A0113 monocarboxyla 100.0 3.6E-33 7.8E-38 276.8 25.2 399 16-501 12-418 (455)
37 PRK10489 enterobactin exporter 100.0 8.4E-32 1.8E-36 265.7 34.6 381 32-517 26-413 (417)
38 PRK10504 putative transporter; 100.0 5.6E-31 1.2E-35 264.3 38.9 381 24-469 11-418 (471)
39 PRK10213 nepI ribonucleoside t 100.0 6.1E-31 1.3E-35 256.3 37.5 369 20-500 17-387 (394)
40 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-31 2.7E-36 265.6 32.8 409 20-507 24-437 (438)
41 PRK12382 putative transporter; 100.0 3.8E-31 8.3E-36 259.0 34.5 367 25-502 17-387 (392)
42 PRK15034 nitrate/nitrite trans 100.0 2.2E-30 4.8E-35 249.1 38.4 391 19-503 30-453 (462)
43 PRK10091 MFS transport protein 100.0 7.6E-31 1.7E-35 255.4 35.1 367 24-501 4-373 (382)
44 COG2223 NarK Nitrate/nitrite t 100.0 1.8E-30 3.9E-35 237.0 33.7 393 16-504 7-401 (417)
45 TIGR00711 efflux_EmrB drug res 100.0 7.9E-31 1.7E-35 264.8 32.8 380 23-465 2-409 (485)
46 PRK15402 multidrug efflux syst 100.0 6.1E-30 1.3E-34 251.6 37.3 360 18-465 8-369 (406)
47 KOG2532 Permease of the major 100.0 1.5E-30 3.2E-35 252.3 30.1 371 60-503 65-446 (466)
48 KOG1330 Sugar transporter/spin 100.0 1.4E-32 3.1E-37 252.5 14.9 379 17-470 27-416 (493)
49 PRK03633 putative MFS family t 100.0 7.5E-30 1.6E-34 248.5 34.7 362 25-501 8-369 (381)
50 TIGR00900 2A0121 H+ Antiporter 100.0 5.1E-30 1.1E-34 249.2 33.5 349 29-465 5-362 (365)
51 cd06174 MFS The Major Facilita 100.0 1.3E-29 2.9E-34 245.0 35.4 346 27-502 3-350 (352)
52 PRK09874 drug efflux system pr 100.0 2.8E-29 6.1E-34 247.7 35.7 373 27-502 18-396 (408)
53 TIGR00710 efflux_Bcr_CflA drug 100.0 4.8E-29 1E-33 244.2 36.7 349 26-463 8-358 (385)
54 TIGR00881 2A0104 phosphoglycer 100.0 5.8E-31 1.3E-35 257.2 23.1 367 30-465 2-371 (379)
55 TIGR00883 2A0106 metabolite-pr 100.0 1.2E-29 2.5E-34 249.4 32.2 365 32-467 2-376 (394)
56 TIGR00897 2A0118 polyol permea 100.0 5.9E-29 1.3E-33 243.7 36.9 362 43-504 33-401 (402)
57 KOG2533 Permease of the major 100.0 3.4E-30 7.4E-35 250.0 24.5 391 21-490 43-442 (495)
58 TIGR00899 2A0120 sugar efflux 100.0 7.5E-29 1.6E-33 241.8 33.8 365 30-504 4-374 (375)
59 PF07690 MFS_1: Major Facilita 100.0 7E-30 1.5E-34 246.9 26.3 347 29-457 2-352 (352)
60 PRK11043 putative transporter; 100.0 2.4E-28 5.2E-33 240.0 37.5 342 32-465 15-356 (401)
61 KOG0255 Synaptic vesicle trans 100.0 5.8E-29 1.3E-33 252.2 33.5 382 64-519 114-508 (521)
62 PRK11195 lysophospholipid tran 100.0 3.4E-28 7.3E-33 236.9 37.0 368 28-501 8-377 (393)
63 PRK15403 multidrug efflux syst 100.0 3.7E-28 8E-33 238.1 36.7 354 24-465 17-372 (413)
64 PRK10133 L-fucose transporter; 100.0 4.1E-28 9E-33 238.8 37.0 393 19-497 22-426 (438)
65 PRK11010 ampG muropeptide tran 100.0 3.4E-28 7.4E-33 242.8 36.1 385 25-506 14-405 (491)
66 PRK10473 multidrug efflux syst 100.0 1.7E-27 3.7E-32 233.3 36.4 336 31-465 11-348 (392)
67 PRK11102 bicyclomycin/multidru 100.0 8.8E-28 1.9E-32 234.3 33.1 335 38-460 6-343 (377)
68 PRK11646 multidrug resistance 100.0 3.5E-27 7.6E-32 230.4 35.4 361 35-501 22-385 (400)
69 TIGR00885 fucP L-fucose:H+ sym 100.0 9.2E-27 2E-31 227.2 35.8 369 25-466 5-381 (410)
70 TIGR00886 2A0108 nitrite extru 100.0 1.3E-27 2.9E-32 232.2 29.5 357 27-453 5-366 (366)
71 PRK15011 sugar efflux transpor 100.0 7.8E-27 1.7E-31 228.0 34.9 362 32-505 24-392 (393)
72 PRK11652 emrD multidrug resist 100.0 1.5E-26 3.2E-31 226.8 35.6 350 21-464 6-358 (394)
73 TIGR00889 2A0110 nucleoside tr 100.0 1.3E-26 2.9E-31 227.1 34.5 387 30-508 9-407 (418)
74 PRK10054 putative transporter; 100.0 8.2E-27 1.8E-31 227.4 30.4 365 30-500 14-380 (395)
75 TIGR00902 2A0127 phenyl propri 100.0 3.9E-26 8.5E-31 222.2 34.7 362 28-500 9-375 (382)
76 TIGR00896 CynX cyanate transpo 100.0 1.4E-26 3.1E-31 223.5 29.6 332 40-468 17-350 (355)
77 PRK09528 lacY galactoside perm 100.0 5.5E-26 1.2E-30 224.4 29.5 374 31-502 18-401 (420)
78 PF05977 MFS_3: Transmembrane 100.0 5.5E-25 1.2E-29 217.5 36.1 376 29-502 16-392 (524)
79 PRK11902 ampG muropeptide tran 100.0 6.2E-25 1.3E-29 215.5 35.6 377 30-505 6-391 (402)
80 PF06609 TRI12: Fungal trichot 100.0 4.3E-25 9.4E-30 216.8 33.6 381 28-465 49-466 (599)
81 PRK08633 2-acyl-glycerophospho 99.9 2.8E-25 6.1E-30 247.4 35.4 332 66-464 45-382 (1146)
82 KOG2615 Permease of the major 99.9 8.9E-27 1.9E-31 208.2 18.0 349 64-468 64-416 (451)
83 PRK11128 putative 3-phenylprop 99.9 9.9E-25 2.1E-29 212.5 34.3 357 32-499 13-374 (382)
84 PRK06814 acylglycerophosphoeth 99.9 3.9E-25 8.5E-30 245.1 33.7 380 25-498 17-416 (1140)
85 PRK10207 dipeptide/tripeptide 99.9 2.4E-24 5.2E-29 213.9 35.3 422 25-501 16-473 (489)
86 TIGR00806 rfc RFC reduced fola 99.9 3.2E-25 7E-30 208.6 26.3 355 38-455 41-404 (511)
87 TIGR00805 oat sodium-independe 99.9 1.1E-25 2.4E-30 229.5 24.2 404 26-466 36-581 (633)
88 TIGR00901 2A0125 AmpG-related 99.9 9.2E-25 2E-29 211.1 28.7 341 40-450 5-355 (356)
89 TIGR00924 yjdL_sub1_fam amino 99.9 1.3E-23 2.7E-28 208.9 36.6 407 27-501 14-465 (475)
90 TIGR00792 gph sugar (Glycoside 99.9 1.3E-24 2.7E-29 216.5 29.2 349 44-469 21-383 (437)
91 KOG2504 Monocarboxylate transp 99.9 7.4E-26 1.6E-30 222.5 19.6 410 17-504 40-476 (509)
92 TIGR00882 2A0105 oligosacchari 99.9 2.7E-24 5.9E-29 210.7 30.0 381 27-501 6-392 (396)
93 COG2807 CynX Cyanate permease 99.9 2.4E-23 5.3E-28 186.0 31.7 370 22-501 11-382 (395)
94 COG0738 FucP Fucose permease [ 99.9 6.1E-23 1.3E-27 186.5 30.2 385 23-497 13-402 (422)
95 KOG3764 Vesicular amine transp 99.9 3.4E-25 7.3E-30 199.4 15.3 387 22-503 20-453 (464)
96 TIGR01301 GPH_sucrose GPH fami 99.9 5E-22 1.1E-26 193.0 37.2 420 37-507 18-475 (477)
97 TIGR02718 sider_RhtX_FptX side 99.9 5.1E-22 1.1E-26 194.2 34.3 378 25-499 3-386 (390)
98 PTZ00207 hypothetical protein; 99.9 4.2E-22 9.2E-27 197.3 31.6 425 18-503 23-551 (591)
99 PRK09584 tppB putative tripept 99.9 1.4E-21 2.9E-26 195.5 33.5 415 31-501 29-476 (500)
100 PRK10429 melibiose:sodium symp 99.9 4.6E-21 1E-25 191.5 28.4 369 31-470 14-397 (473)
101 PRK15462 dipeptide/tripeptide 99.9 6.3E-20 1.4E-24 179.1 34.5 141 64-232 41-184 (493)
102 PRK09669 putative symporter Ya 99.9 1.6E-20 3.4E-25 186.6 30.0 348 44-470 31-392 (444)
103 PF03825 Nuc_H_symport: Nucleo 99.9 1E-19 2.2E-24 175.0 32.5 380 31-505 10-397 (400)
104 PF11700 ATG22: Vacuole efflux 99.9 5.1E-19 1.1E-23 173.3 37.8 372 67-509 69-473 (477)
105 TIGR00788 fbt folate/biopterin 99.9 1.8E-20 3.9E-25 185.8 25.8 377 23-468 26-415 (468)
106 KOG4686 Predicted sugar transp 99.9 9.2E-22 2E-26 168.6 14.2 402 20-506 41-445 (459)
107 COG2211 MelB Na+/melibiose sym 99.9 7.8E-19 1.7E-23 166.7 31.3 391 64-520 44-452 (467)
108 KOG2563 Permease of the major 99.9 2E-19 4.3E-24 165.8 25.8 411 16-509 38-455 (480)
109 PF13347 MFS_2: MFS/sugar tran 99.9 4.3E-19 9.3E-24 175.5 28.1 349 44-471 23-389 (428)
110 PF01306 LacY_symp: LacY proto 99.8 3.8E-19 8.2E-24 167.3 24.8 376 31-507 15-404 (412)
111 PRK11462 putative transporter; 99.8 3.5E-18 7.5E-23 169.5 31.3 337 64-470 41-391 (460)
112 PRK09848 glucuronide transport 99.8 5.8E-18 1.3E-22 168.6 29.8 341 45-470 31-392 (448)
113 KOG2325 Predicted transporter/ 99.8 1.2E-18 2.6E-23 165.8 16.2 415 17-501 28-472 (488)
114 COG2270 Permeases of the major 99.8 6.7E-17 1.5E-21 148.5 26.0 377 64-508 54-433 (438)
115 KOG3626 Organic anion transpor 99.8 6.7E-17 1.5E-21 160.2 25.3 404 24-467 98-650 (735)
116 TIGR01272 gluP glucose/galacto 99.8 1.4E-16 3.1E-21 149.2 24.3 287 127-490 10-301 (310)
117 COG3104 PTR2 Dipeptide/tripept 99.8 5.3E-16 1.1E-20 146.1 24.9 392 63-501 56-484 (498)
118 PF03137 OATP: Organic Anion T 99.7 1.1E-18 2.4E-23 173.5 -0.1 402 28-465 8-513 (539)
119 PRK10642 proline/glycine betai 99.7 4.4E-15 9.5E-20 149.4 20.9 170 64-261 282-458 (490)
120 PF03209 PUCC: PUCC protein; 99.6 5.5E-13 1.2E-17 123.5 28.0 365 64-501 11-395 (403)
121 KOG2816 Predicted transporter 99.6 1.2E-13 2.7E-18 133.9 23.4 370 22-469 21-395 (463)
122 TIGR00880 2_A_01_02 Multidrug 99.6 3E-14 6.4E-19 117.6 11.6 138 72-238 2-140 (141)
123 TIGR01299 synapt_SV2 synaptic 99.6 2.1E-13 4.5E-18 140.2 20.1 141 71-241 598-738 (742)
124 TIGR00889 2A0110 nucleoside tr 99.5 1.4E-13 3E-18 135.2 16.8 158 65-241 248-407 (418)
125 PRK15011 sugar efflux transpor 99.5 2.3E-12 5E-17 126.1 19.7 145 64-238 248-392 (393)
126 PF03092 BT1: BT1 family; Int 99.5 1.8E-11 4E-16 119.9 25.6 395 43-508 10-417 (433)
127 PRK09528 lacY galactoside perm 99.5 8.6E-13 1.9E-17 130.5 16.0 149 64-241 258-408 (420)
128 PRK11551 putative 3-hydroxyphe 99.5 3.2E-12 7E-17 126.0 19.1 157 43-237 240-396 (406)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 1.5E-12 3.3E-17 127.0 15.6 139 64-229 236-374 (377)
130 PRK11663 regulatory protein Uh 99.5 4E-12 8.7E-17 126.1 18.6 175 299-506 26-201 (434)
131 cd06174 MFS The Major Facilita 99.4 6.2E-12 1.4E-16 121.4 18.6 143 64-235 207-350 (352)
132 PRK05122 major facilitator sup 99.4 8.5E-12 1.8E-16 122.7 19.6 141 69-238 250-390 (399)
133 PF05631 DUF791: Protein of un 99.4 1.8E-10 3.8E-15 105.3 25.2 184 19-240 34-220 (354)
134 COG2271 UhpC Sugar phosphate p 99.4 2.7E-12 5.8E-17 118.4 12.6 179 292-503 25-205 (448)
135 PRK09874 drug efflux system pr 99.4 1.3E-11 2.8E-16 121.9 18.2 136 69-233 259-394 (408)
136 PRK09556 uhpT sugar phosphate 99.4 2E-11 4.2E-16 122.4 19.2 182 25-234 260-446 (467)
137 TIGR02332 HpaX 4-hydroxyphenyl 99.4 9.1E-12 2E-16 122.5 16.4 184 297-507 9-193 (412)
138 TIGR00895 2A0115 benzoate tran 99.4 3.4E-12 7.5E-17 125.5 13.0 174 301-507 22-196 (398)
139 PRK10213 nepI ribonucleoside t 99.4 1.8E-11 3.9E-16 119.6 17.6 174 299-505 23-197 (394)
140 PRK12382 putative transporter; 99.4 3.2E-11 6.9E-16 118.3 19.2 136 70-234 251-386 (392)
141 TIGR00899 2A0120 sugar efflux 99.4 1.7E-11 3.6E-16 119.6 17.0 145 64-238 231-375 (375)
142 TIGR00892 2A0113 monocarboxyla 99.4 7.9E-12 1.7E-16 124.5 14.8 153 41-231 259-415 (455)
143 TIGR00893 2A0114 d-galactonate 99.4 6.7E-12 1.4E-16 123.4 14.2 162 313-507 11-173 (399)
144 TIGR00891 2A0112 putative sial 99.4 1.5E-11 3.3E-16 121.2 16.8 180 297-507 13-192 (405)
145 PRK10489 enterobactin exporter 99.4 2.7E-11 5.7E-16 119.8 17.8 148 64-240 255-403 (417)
146 PRK09705 cynX putative cyanate 99.3 4.8E-11 1E-15 116.7 18.4 164 40-242 222-387 (393)
147 PRK10054 putative transporter; 99.3 2.3E-11 5E-16 118.9 15.7 174 299-506 10-185 (395)
148 PRK09952 shikimate transporter 99.3 9E-11 2E-15 116.4 20.1 151 64-240 282-436 (438)
149 TIGR00881 2A0104 phosphoglycer 99.3 9.5E-12 2.1E-16 121.5 13.0 163 311-506 10-174 (379)
150 PRK03545 putative arabinose tr 99.3 8E-11 1.7E-15 115.3 19.4 139 64-233 237-376 (390)
151 TIGR00902 2A0127 phenyl propri 99.3 7.1E-11 1.5E-15 115.2 18.9 132 42-190 224-356 (382)
152 PRK03893 putative sialic acid 99.3 1.5E-11 3.2E-16 124.8 14.7 132 43-188 295-427 (496)
153 PF01770 Folate_carrier: Reduc 99.3 2.4E-10 5.3E-15 107.5 21.4 344 64-452 36-388 (412)
154 TIGR00710 efflux_Bcr_CflA drug 99.3 2.4E-11 5.2E-16 119.0 15.7 166 309-507 18-184 (385)
155 KOG3098 Uncharacterized conser 99.3 9.9E-10 2.1E-14 105.2 25.8 340 74-463 56-411 (461)
156 KOG3762 Predicted transporter 99.3 1.9E-11 4E-16 115.8 13.4 151 318-501 393-544 (618)
157 PRK03633 putative MFS family t 99.3 1.1E-10 2.5E-15 113.8 19.2 148 44-233 221-368 (381)
158 PRK15462 dipeptide/tripeptide 99.3 4.9E-11 1.1E-15 117.1 16.4 174 297-502 10-187 (493)
159 COG2814 AraJ Arabinose efflux 99.3 3.1E-11 6.8E-16 112.9 14.2 176 296-504 13-189 (394)
160 TIGR00711 efflux_EmrB drug res 99.3 3.1E-11 6.8E-16 122.1 15.6 175 300-507 6-181 (485)
161 PRK10504 putative transporter; 99.3 5.7E-11 1.2E-15 119.6 17.1 175 298-505 12-187 (471)
162 PRK14995 methyl viologen resis 99.3 7.9E-11 1.7E-15 118.8 18.0 177 297-506 7-185 (495)
163 TIGR00924 yjdL_sub1_fam amino 99.3 3.9E-11 8.4E-16 119.8 15.4 175 297-504 11-192 (475)
164 PF07690 MFS_1: Major Facilita 99.3 3.1E-11 6.8E-16 116.6 14.1 163 310-505 10-174 (352)
165 PRK12307 putative sialic acid 99.3 9.4E-11 2E-15 116.4 17.5 161 298-491 20-180 (426)
166 PLN00028 nitrate transmembrane 99.3 7.8E-11 1.7E-15 118.0 16.8 180 301-505 41-220 (476)
167 TIGR00712 glpT glycerol-3-phos 99.3 7E-11 1.5E-15 117.4 16.3 143 348-506 66-209 (438)
168 TIGR00897 2A0118 polyol permea 99.3 2.7E-10 5.8E-15 112.0 19.7 165 36-236 235-400 (402)
169 PRK03699 putative transporter; 99.3 1.6E-10 3.4E-15 113.3 18.0 167 31-237 213-380 (394)
170 PRK10473 multidrug efflux syst 99.3 6.7E-11 1.4E-15 116.0 15.3 167 308-507 15-182 (392)
171 TIGR00883 2A0106 metabolite-pr 99.3 4.5E-11 9.7E-16 117.4 14.1 144 32-191 228-377 (394)
172 TIGR00879 SP MFS transporter, 99.3 7.4E-11 1.6E-15 119.2 15.8 184 24-240 285-474 (481)
173 PRK11273 glpT sn-glycerol-3-ph 99.3 2.4E-10 5.3E-15 114.0 18.5 162 315-506 48-211 (452)
174 PRK11010 ampG muropeptide tran 99.3 1.1E-09 2.5E-14 109.8 23.3 148 64-239 254-405 (491)
175 PF11700 ATG22: Vacuole efflux 99.3 6.4E-10 1.4E-14 109.6 20.9 161 41-239 300-470 (477)
176 PRK10091 MFS transport protein 99.3 1.5E-10 3.2E-15 113.0 15.8 176 298-506 5-181 (382)
177 PRK10077 xylE D-xylose transpo 99.3 5E-10 1.1E-14 113.1 20.1 171 41-240 289-461 (479)
178 PRK10207 dipeptide/tripeptide 99.3 2E-10 4.4E-15 114.7 16.8 176 296-503 14-193 (489)
179 PRK15402 multidrug efflux syst 99.2 2.9E-10 6.3E-15 112.0 17.2 160 315-507 32-192 (406)
180 PRK11652 emrD multidrug resist 99.2 2.8E-10 6.1E-15 111.7 16.9 177 298-507 10-187 (394)
181 TIGR00900 2A0121 H+ Antiporter 99.2 4.3E-10 9.4E-15 109.2 17.1 131 44-189 232-363 (365)
182 TIGR00903 2A0129 major facilit 99.2 2.5E-10 5.5E-15 109.9 15.1 162 312-507 7-169 (368)
183 PF06813 Nodulin-like: Nodulin 99.2 5.4E-10 1.2E-14 99.0 15.4 184 21-240 1-185 (250)
184 COG2270 Permeases of the major 99.2 7.7E-10 1.7E-14 102.6 16.6 177 24-239 255-431 (438)
185 PRK11646 multidrug resistance 99.2 5E-10 1.1E-14 109.7 16.5 163 309-505 23-187 (400)
186 TIGR00887 2A0109 phosphate:H+ 99.2 8E-10 1.7E-14 111.8 18.1 159 347-507 60-228 (502)
187 PF05977 MFS_3: Transmembrane 99.2 1.4E-09 3.1E-14 108.4 19.4 153 41-232 236-389 (524)
188 TIGR00882 2A0105 oligosacchari 99.2 1.2E-09 2.5E-14 107.4 18.6 140 64-232 250-390 (396)
189 PRK09584 tppB putative tripept 99.2 7E-10 1.5E-14 111.5 17.1 172 297-500 22-197 (500)
190 PRK15403 multidrug efflux syst 99.2 6.6E-10 1.4E-14 109.3 16.6 139 348-507 56-195 (413)
191 TIGR00894 2A0114euk Na(+)-depe 99.2 1.7E-10 3.7E-15 115.8 12.1 136 348-502 81-217 (465)
192 KOG1330 Sugar transporter/spin 99.2 1.6E-11 3.6E-16 114.4 4.1 146 348-513 73-219 (493)
193 PRK11128 putative 3-phenylprop 99.2 2E-09 4.3E-14 105.1 19.0 120 64-190 236-356 (382)
194 TIGR00792 gph sugar (Glycoside 99.2 1.6E-09 3.4E-14 108.1 18.5 121 66-191 255-382 (437)
195 PRK11102 bicyclomycin/multidru 99.2 3.3E-10 7.2E-15 110.5 13.3 157 317-506 12-169 (377)
196 PRK10406 alpha-ketoglutarate t 99.2 1E-09 2.3E-14 108.9 16.9 152 350-506 70-221 (432)
197 TIGR00886 2A0108 nitrite extru 99.1 1.2E-09 2.6E-14 106.1 16.1 182 301-505 6-190 (366)
198 TIGR02718 sider_RhtX_FptX side 99.1 3E-09 6.5E-14 104.2 18.2 146 64-232 239-386 (390)
199 PRK11043 putative transporter; 99.1 1.9E-09 4.2E-14 106.0 16.9 138 348-506 46-183 (401)
200 PRK15075 citrate-proton sympor 99.1 4.7E-09 1E-13 104.3 19.7 124 64-191 270-396 (434)
201 TIGR00885 fucP L-fucose:H+ sym 99.1 1.7E-09 3.7E-14 106.0 16.4 186 299-501 6-204 (410)
202 PRK11195 lysophospholipid tran 99.1 1.1E-09 2.4E-14 107.1 14.7 134 348-506 43-176 (393)
203 PRK15034 nitrate/nitrite trans 99.1 2.6E-09 5.6E-14 103.9 16.4 151 349-503 76-231 (462)
204 TIGR00898 2A0119 cation transp 99.1 2.3E-09 5.1E-14 108.9 17.0 139 74-241 361-499 (505)
205 TIGR00880 2_A_01_02 Multidrug 99.1 1E-09 2.2E-14 90.3 11.2 129 353-502 8-136 (141)
206 TIGR01272 gluP glucose/galacto 99.1 1.2E-08 2.7E-13 95.7 17.9 119 64-191 174-292 (310)
207 PRK11902 ampG muropeptide tran 99.0 2.2E-08 4.8E-13 98.4 20.3 141 64-236 241-389 (402)
208 TIGR00806 rfc RFC reduced fola 99.0 1.7E-08 3.7E-13 96.5 18.2 161 316-508 46-207 (511)
209 PRK09848 glucuronide transport 99.0 1.8E-08 4E-13 100.6 19.2 124 64-191 260-390 (448)
210 COG2223 NarK Nitrate/nitrite t 99.0 6.1E-09 1.3E-13 96.7 14.4 155 316-502 34-191 (417)
211 KOG2615 Permease of the major 99.0 8.7E-10 1.9E-14 100.2 8.6 113 344-465 69-181 (451)
212 TIGR01301 GPH_sucrose GPH fami 99.0 9.6E-09 2.1E-13 100.7 16.6 198 298-507 6-222 (477)
213 KOG2504 Monocarboxylate transp 99.0 2.5E-09 5.4E-14 106.1 12.1 176 24-237 299-476 (509)
214 TIGR00805 oat sodium-independe 99.0 5.3E-09 1.1E-13 107.7 14.1 180 316-507 53-284 (633)
215 TIGR00926 2A1704 Peptide:H+ sy 99.0 9E-07 2E-11 90.6 30.0 154 64-233 19-178 (654)
216 PF03825 Nuc_H_symport: Nucleo 99.0 2.5E-08 5.5E-13 96.5 18.0 153 65-239 240-398 (400)
217 PRK08633 2-acyl-glycerophospho 99.0 1.6E-08 3.4E-13 113.7 19.1 118 64-187 264-382 (1146)
218 TIGR00896 CynX cyanate transpo 99.0 1.2E-08 2.6E-13 98.6 15.7 133 42-191 216-350 (355)
219 PRK10429 melibiose:sodium symp 99.0 2.4E-08 5.1E-13 100.3 17.7 123 66-192 264-396 (473)
220 PF01306 LacY_symp: LacY proto 99.0 6.9E-08 1.5E-12 91.8 19.3 148 64-240 255-404 (412)
221 PF06963 FPN1: Ferroportin1 (F 99.0 9E-07 2E-11 85.4 27.0 382 27-460 6-412 (432)
222 TIGR00901 2A0125 AmpG-related 99.0 1.5E-08 3.2E-13 98.0 14.8 122 42-173 228-355 (356)
223 PRK10133 L-fucose transporter; 99.0 2.8E-08 6.2E-13 98.3 17.0 150 298-464 28-177 (438)
224 PTZ00207 hypothetical protein; 99.0 1.5E-08 3.2E-13 101.6 15.0 167 309-505 40-207 (591)
225 KOG0569 Permease of the major 98.9 9.9E-08 2.1E-12 92.6 19.6 167 40-241 287-459 (485)
226 COG0477 ProP Permeases of the 98.9 6.6E-08 1.4E-12 91.6 18.1 162 32-228 11-176 (338)
227 KOG2532 Permease of the major 98.9 1.2E-08 2.6E-13 100.0 12.4 137 348-502 78-214 (466)
228 PRK09669 putative symporter Ya 98.9 9.6E-08 2.1E-12 95.2 18.7 119 69-192 265-391 (444)
229 PRK06814 acylglycerophosphoeth 98.9 2.9E-08 6.3E-13 111.1 16.6 118 64-187 257-394 (1140)
230 PF13347 MFS_2: MFS/sugar tran 98.9 2.2E-08 4.7E-13 99.3 13.4 149 28-192 230-387 (428)
231 KOG4686 Predicted sugar transp 98.9 1.7E-08 3.8E-13 87.9 10.4 118 64-189 296-414 (459)
232 TIGR00769 AAA ADP/ATP carrier 98.9 6.6E-05 1.4E-09 73.6 35.6 123 67-189 42-191 (472)
233 KOG3764 Vesicular amine transp 98.8 6E-09 1.3E-13 95.5 7.0 138 348-506 111-249 (464)
234 KOG0255 Synaptic vesicle trans 98.8 1.6E-08 3.5E-13 103.0 11.0 139 345-507 120-258 (521)
235 KOG0637 Sucrose transporter an 98.8 8E-09 1.7E-13 96.5 7.1 123 64-186 63-202 (498)
236 PF06609 TRI12: Fungal trichot 98.8 4.7E-08 1E-12 97.4 12.3 131 349-501 84-214 (599)
237 COG2211 MelB Na+/melibiose sym 98.8 5.3E-07 1.1E-11 86.8 18.3 162 64-238 268-438 (467)
238 KOG0252 Inorganic phosphate tr 98.8 6.9E-08 1.5E-12 90.3 11.2 119 345-464 86-204 (538)
239 PF02487 CLN3: CLN3 protein; 98.8 5.9E-06 1.3E-10 78.3 24.1 108 70-188 61-168 (402)
240 COG2807 CynX Cyanate permease 98.7 5.8E-07 1.3E-11 81.9 16.3 154 40-232 225-380 (395)
241 TIGR00788 fbt folate/biopterin 98.7 1.8E-07 4E-12 93.3 13.4 160 63-238 283-447 (468)
242 KOG0253 Synaptic vesicle trans 98.7 8.8E-08 1.9E-12 86.9 9.6 154 22-183 328-490 (528)
243 PF05978 UNC-93: Ion channel r 98.7 9.3E-07 2E-11 72.3 13.7 116 65-187 34-149 (156)
244 PRK11462 putative transporter; 98.6 5E-06 1.1E-10 83.0 20.4 119 69-191 264-389 (460)
245 PF06779 DUF1228: Protein of u 98.6 2.6E-07 5.6E-12 65.8 7.9 76 35-120 4-79 (85)
246 PF06813 Nodulin-like: Nodulin 98.6 5.9E-07 1.3E-11 79.8 12.0 143 308-465 14-156 (250)
247 COG3104 PTR2 Dipeptide/tripept 98.6 4.5E-07 9.7E-12 86.6 11.4 183 297-506 22-208 (498)
248 KOG2533 Permease of the major 98.6 9.3E-07 2E-11 87.1 13.3 146 348-508 86-232 (495)
249 PF03209 PUCC: PUCC protein; 98.5 2.2E-05 4.8E-10 73.7 20.5 154 64-233 240-394 (403)
250 KOG0254 Predicted transporter 98.5 1.8E-06 3.8E-11 87.7 13.7 140 348-507 94-233 (513)
251 COG0738 FucP Fucose permease [ 98.5 5E-06 1.1E-10 77.2 14.9 186 299-501 16-207 (422)
252 KOG4332 Predicted sugar transp 98.5 9.3E-06 2E-10 70.6 15.0 86 64-156 68-154 (454)
253 KOG3810 Micronutrient transpor 98.4 3E-06 6.4E-11 76.5 10.9 379 64-502 37-419 (433)
254 PF00083 Sugar_tr: Sugar (and 98.4 2.7E-08 5.7E-13 99.7 -2.5 144 348-506 51-194 (451)
255 KOG2325 Predicted transporter/ 98.4 3E-06 6.6E-11 81.9 10.8 156 348-508 76-234 (488)
256 KOG3574 Acetyl-CoA transporter 98.3 5.3E-05 1.1E-09 69.6 16.6 149 21-182 29-188 (510)
257 KOG3762 Predicted transporter 98.3 2.5E-06 5.4E-11 81.8 7.9 140 64-232 402-542 (618)
258 PF12832 MFS_1_like: MFS_1 lik 98.2 1.2E-05 2.7E-10 57.0 8.1 68 31-108 8-75 (77)
259 TIGR00939 2a57 Equilibrative N 98.2 0.00067 1.5E-08 66.5 22.9 56 125-185 104-159 (437)
260 KOG2816 Predicted transporter 98.2 1.5E-05 3.3E-10 78.0 11.3 136 352-511 71-207 (463)
261 KOG1479 Nucleoside transporter 98.1 0.00048 1E-08 65.0 18.2 175 36-241 31-208 (406)
262 PF13000 Acatn: Acetyl-coenzym 98.0 0.00022 4.8E-09 68.4 15.8 46 423-468 424-469 (544)
263 KOG1237 H+/oligopeptide sympor 98.0 0.0041 9E-08 63.0 25.3 161 40-233 55-241 (571)
264 PF03219 TLC: TLC ATP/ADP tran 98.0 0.021 4.6E-07 56.6 35.2 160 18-188 19-205 (491)
265 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00034 7.4E-09 72.0 15.9 140 357-502 37-180 (654)
266 PF05631 DUF791: Protein of un 97.9 0.00094 2E-08 61.9 16.5 155 321-507 59-220 (354)
267 KOG2563 Permease of the major 97.9 0.00021 4.4E-09 67.7 12.1 159 346-511 82-242 (480)
268 PF00854 PTR2: POT family; In 97.8 0.00023 5.1E-09 69.0 12.4 114 99-235 2-121 (372)
269 PF03137 OATP: Organic Anion T 97.5 1.8E-05 3.9E-10 79.6 -0.9 161 348-508 43-254 (539)
270 KOG3626 Organic anion transpor 97.3 0.0057 1.2E-07 62.5 14.3 161 350-510 139-349 (735)
271 PF07672 MFS_Mycoplasma: Mycop 97.2 0.0042 9E-08 54.7 10.9 115 348-462 146-264 (267)
272 PF01770 Folate_carrier: Reduc 97.2 0.019 4.2E-07 55.0 15.6 128 361-508 59-186 (412)
273 PF03092 BT1: BT1 family; Int 97.2 0.0047 1E-07 61.0 12.0 165 62-241 249-417 (433)
274 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0026 5.5E-08 45.2 7.2 62 308-381 12-73 (77)
275 PRK03612 spermidine synthase; 97.1 0.036 7.8E-07 55.9 18.0 123 64-188 46-170 (521)
276 COG3202 ATP/ADP translocase [E 97.1 0.3 6.4E-06 47.6 33.4 160 18-188 22-209 (509)
277 PF02487 CLN3: CLN3 protein; 97.1 0.014 3.1E-07 55.8 14.0 116 65-188 278-396 (402)
278 PF05978 UNC-93: Ion channel r 97.1 0.023 5.1E-07 46.6 13.4 102 355-465 49-150 (156)
279 TIGR00769 AAA ADP/ATP carrier 97.1 0.031 6.7E-07 55.2 16.2 108 358-465 59-190 (472)
280 KOG3098 Uncharacterized conser 97.0 0.11 2.4E-06 50.9 18.7 115 71-186 282-411 (461)
281 KOG3097 Predicted membrane pro 97.0 0.13 2.8E-06 47.1 17.5 104 78-188 68-182 (390)
282 PF01733 Nucleoside_tran: Nucl 96.6 0.00038 8.3E-09 65.3 -0.8 111 348-460 187-304 (309)
283 PF06963 FPN1: Ferroportin1 (F 96.3 0.22 4.7E-06 48.8 16.0 152 25-186 260-415 (432)
284 COG0477 ProP Permeases of the 95.8 0.26 5.7E-06 45.9 14.0 129 348-493 44-174 (338)
285 KOG3880 Predicted small molecu 95.5 0.068 1.5E-06 48.3 7.7 106 70-188 64-171 (409)
286 PF00854 PTR2: POT family; In 95.3 0.064 1.4E-06 52.1 8.0 117 374-503 2-122 (372)
287 PF03219 TLC: TLC ATP/ADP tran 94.9 0.52 1.1E-05 47.0 12.8 109 357-465 73-205 (491)
288 KOG0637 Sucrose transporter an 94.9 0.051 1.1E-06 52.1 5.4 149 301-461 37-200 (498)
289 PRK03612 spermidine synthase; 93.9 1.6 3.5E-05 44.2 14.1 49 438-498 143-191 (521)
290 KOG1479 Nucleoside transporter 93.8 6.1 0.00013 38.0 16.8 21 484-504 184-204 (406)
291 PF06779 DUF1228: Protein of u 93.8 0.41 8.9E-06 34.5 7.0 72 311-394 7-78 (85)
292 KOG3574 Acetyl-CoA transporter 93.6 1.2 2.5E-05 42.1 11.2 151 297-462 32-191 (510)
293 COG3202 ATP/ADP translocase [E 92.8 5 0.00011 39.5 14.6 111 355-465 74-209 (509)
294 TIGR00939 2a57 Equilibrative N 92.7 7.5 0.00016 38.5 16.4 90 348-438 50-139 (437)
295 PF13000 Acatn: Acetyl-coenzym 91.1 5.4 0.00012 39.4 12.7 39 426-464 140-178 (544)
296 KOG4332 Predicted sugar transp 87.7 1.3 2.8E-05 39.6 5.4 52 321-384 62-113 (454)
297 KOG1237 H+/oligopeptide sympor 87.3 34 0.00074 35.3 16.1 132 357-501 87-242 (571)
298 KOG3880 Predicted small molecu 85.1 2.4 5.3E-05 38.8 5.8 113 68-186 288-401 (409)
299 COG4262 Predicted spermidine s 83.8 40 0.00086 31.9 15.0 119 64-186 39-162 (508)
300 PF07672 MFS_Mycoplasma: Mycop 83.7 17 0.00036 32.7 10.4 111 69-181 142-257 (267)
301 KOG2601 Iron transporter [Inor 81.9 9.7 0.00021 36.1 8.5 76 25-109 29-104 (503)
302 COG5336 Uncharacterized protei 81.1 5.2 0.00011 29.8 5.2 43 68-110 42-85 (116)
303 KOG2601 Iron transporter [Inor 80.8 55 0.0012 31.4 13.1 35 431-465 166-200 (503)
304 PF01733 Nucleoside_tran: Nucl 74.7 1.2 2.5E-05 41.9 0.5 115 72-186 186-307 (309)
305 PF11947 DUF3464: Protein of u 69.0 8.6 0.00019 31.2 4.1 34 422-455 112-145 (153)
306 PF03547 Mem_trans: Membrane t 68.1 24 0.00051 34.4 8.0 27 434-461 90-116 (385)
307 KOG3810 Micronutrient transpor 67.6 52 0.0011 31.3 9.2 97 68-170 271-369 (433)
308 PF06912 DUF1275: Protein of u 64.5 97 0.0021 27.0 17.5 33 158-190 157-189 (209)
309 PRK10263 DNA translocase FtsK; 62.8 90 0.0019 35.4 11.4 23 76-98 60-82 (1355)
310 KOG3097 Predicted membrane pro 60.6 1.5E+02 0.0033 28.0 10.8 27 358-384 73-99 (390)
311 PF07857 DUF1632: CEO family ( 60.2 1E+02 0.0022 27.9 9.6 24 437-460 76-99 (254)
312 COG5336 Uncharacterized protei 59.5 56 0.0012 24.6 6.4 34 435-468 37-70 (116)
313 KOG2881 Predicted membrane pro 58.7 1.4E+02 0.003 26.9 11.6 21 362-382 259-279 (294)
314 COG3619 Predicted membrane pro 58.3 1.3E+02 0.0029 26.5 18.7 123 67-191 54-196 (226)
315 TIGR01667 YCCS_YHJK integral m 53.7 1.1E+02 0.0024 32.5 10.2 42 96-142 55-96 (701)
316 PF08611 DUF1774: Fungal prote 53.2 91 0.002 23.1 6.9 46 441-501 26-71 (97)
317 PF01102 Glycophorin_A: Glycop 50.1 14 0.00031 28.7 2.3 11 500-510 85-95 (122)
318 TIGR01666 YCCS hypothetical me 49.6 1.4E+02 0.0031 31.7 10.2 48 89-141 44-95 (704)
319 PF02990 EMP70: Endomembrane p 47.0 2.3E+02 0.005 29.0 11.0 25 348-372 302-326 (521)
320 PF06027 DUF914: Eukaryotic pr 42.5 1.5E+02 0.0033 28.1 8.3 10 362-371 186-195 (334)
321 PF02694 UPF0060: Uncharacteri 40.9 68 0.0015 24.2 4.4 52 68-119 54-105 (107)
322 PF03606 DcuC: C4-dicarboxylat 40.5 4E+02 0.0087 26.8 12.1 16 362-377 103-118 (465)
323 PRK02237 hypothetical protein; 36.5 1E+02 0.0023 23.3 4.8 51 69-119 57-107 (109)
324 PF11947 DUF3464: Protein of u 36.0 1.8E+02 0.0038 23.9 6.5 50 127-179 97-146 (153)
325 PF11151 DUF2929: Protein of u 34.3 1.4E+02 0.003 19.7 6.3 28 212-239 28-55 (57)
326 TIGR02230 ATPase_gene1 F0F1-AT 34.2 2E+02 0.0044 21.6 7.3 14 214-227 75-88 (100)
327 PF12805 FUSC-like: FUSC-like 33.9 3E+02 0.0064 25.5 8.8 36 102-142 3-38 (284)
328 TIGR02230 ATPase_gene1 F0F1-AT 33.9 2E+02 0.0044 21.6 7.2 31 357-387 57-87 (100)
329 PRK11469 hypothetical protein; 33.8 1.9E+02 0.004 24.8 6.8 44 70-113 136-180 (188)
330 PF06645 SPC12: Microsomal sig 33.6 1.2E+02 0.0025 21.5 4.6 33 454-501 21-53 (76)
331 PF05313 Pox_P21: Poxvirus P21 31.8 3.1E+02 0.0068 23.1 8.2 23 433-455 110-132 (189)
332 COG1268 BioY Uncharacterized c 31.8 1E+02 0.0022 26.2 4.8 24 74-97 88-111 (184)
333 PF02632 BioY: BioY family; I 31.0 1E+02 0.0022 25.2 4.6 26 74-99 59-84 (148)
334 COG4262 Predicted spermidine s 30.7 4.9E+02 0.011 25.0 12.7 21 444-464 143-163 (508)
335 PRK14229 camphor resistance pr 30.7 2.4E+02 0.0053 21.5 6.7 22 136-157 58-79 (108)
336 PF05297 Herpes_LMP1: Herpesvi 30.1 17 0.00036 32.6 -0.1 14 494-507 176-189 (381)
337 PRK11469 hypothetical protein; 29.2 3.7E+02 0.008 23.0 15.6 43 348-390 140-182 (188)
338 PRK10263 DNA translocase FtsK; 28.3 5.2E+02 0.011 29.8 10.4 29 354-382 142-170 (1355)
339 PF13493 DUF4118: Domain of un 28.3 1.8E+02 0.0039 21.7 5.4 67 30-98 39-105 (105)
340 PF01405 PsbT: Photosystem II 28.3 1.1E+02 0.0024 16.8 3.1 10 232-241 19-28 (29)
341 PRK11588 hypothetical protein; 27.9 5.4E+02 0.012 26.2 9.7 151 362-537 135-286 (506)
342 KOG4830 Predicted sugar transp 27.9 38 0.00083 30.4 1.7 64 28-101 22-94 (412)
343 PF10183 ESSS: ESSS subunit of 27.7 2.3E+02 0.005 21.5 5.7 32 209-240 53-85 (105)
344 COG2056 Predicted permease [Ge 27.7 3E+02 0.0066 26.2 7.3 22 482-503 190-211 (444)
345 PRK10697 DNA-binding transcrip 27.5 2.4E+02 0.0052 22.0 5.7 28 215-242 36-69 (118)
346 COG2076 EmrE Membrane transpor 27.1 2.6E+02 0.0057 21.3 5.7 46 348-394 6-51 (106)
347 PF02554 CstA: Carbon starvati 26.8 5.9E+02 0.013 24.6 18.1 29 154-183 48-77 (376)
348 PF06123 CreD: Inner membrane 26.1 4.6E+02 0.0099 26.0 8.8 17 362-378 310-326 (430)
349 KOG4255 Uncharacterized conser 26.1 5.8E+02 0.013 24.3 13.3 28 473-500 180-207 (439)
350 PF04281 Tom22: Mitochondrial 25.7 2.2E+02 0.0047 22.9 5.3 25 151-175 59-83 (137)
351 PF08507 COPI_assoc: COPI asso 25.5 3.2E+02 0.0069 21.9 6.5 13 451-463 68-80 (136)
352 PRK11715 inner membrane protei 24.3 5E+02 0.011 25.8 8.6 18 428-445 375-392 (436)
353 COG4769 Predicted membrane pro 24.1 61 0.0013 26.6 2.0 53 76-140 81-133 (181)
354 PRK11875 psbT photosystem II r 23.7 1.5E+02 0.0032 16.6 2.8 10 233-242 20-29 (31)
355 PF07857 DUF1632: CEO family ( 23.5 5.6E+02 0.012 23.3 12.7 24 215-238 114-137 (254)
356 PF04024 PspC: PspC domain; I 23.3 1.9E+02 0.0041 19.3 4.0 28 213-240 29-60 (61)
357 PF15048 OSTbeta: Organic solu 23.1 1.3E+02 0.0028 23.4 3.5 23 478-500 31-53 (125)
358 KOG4112 Signal peptidase subun 22.5 3.2E+02 0.0069 20.1 6.5 42 444-501 27-68 (101)
359 COG1288 Predicted membrane pro 22.1 7.9E+02 0.017 24.4 10.8 32 210-241 213-246 (481)
360 TIGR00267 conserved hypothetic 21.2 5E+02 0.011 21.8 9.8 19 359-377 129-147 (169)
361 COG1288 Predicted membrane pro 21.2 1.2E+02 0.0025 29.7 3.6 26 476-501 212-237 (481)
362 PRK14230 camphor resistance pr 21.2 4.1E+02 0.0088 20.8 7.7 49 103-157 35-83 (119)
363 PF04277 OAD_gamma: Oxaloaceta 20.7 1.8E+02 0.0038 20.5 3.8 11 484-494 14-24 (79)
364 PF15061 DUF4538: Domain of un 20.6 2.2E+02 0.0048 18.8 3.7 21 213-233 3-23 (58)
365 CHL00031 psbT photosystem II p 20.4 1.7E+02 0.0036 16.6 2.6 10 233-242 20-29 (33)
366 PF04281 Tom22: Mitochondrial 20.1 3.9E+02 0.0085 21.5 5.8 24 429-452 60-83 (137)
No 1
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-48 Score=354.29 Aligned_cols=479 Identities=68% Similarity=1.139 Sum_probs=404.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
+|++...+++..++.|.+.||..+++.+.+.+...|++.++.. .+.++...+.+..+..+|..+||++.|+++||+||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~--g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG--GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC--CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 8899999999999999999999999999999999998766544 56888899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcc-hhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPK-GVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (540)
|+++...++++.+++++++++...+++ ..++++...|++.|+|.|+-+|...+..+|...+++||...+.+.+..+.|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999999988776666 5678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHH
Q 046667 177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASD 256 (540)
Q Consensus 177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (540)
+.|.+++..+...+...++.. ++-+..+.-||..|.+++++++..+...+.+|||+++..+..++.+.+.++
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d 265 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGD 265 (538)
T ss_pred hhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhc
Confidence 999999888877665422211 111233456999999999999999999999999999976777776766665
Q ss_pred HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchh
Q 046667 257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMN 336 (540)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (540)
..+....+.+++++. +.....+.+....|...+.+++-+.++..+..||..-+.+|...++...+++++|+.+.....
T Consensus 266 ~~k~~~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~- 343 (538)
T KOG0252|consen 266 MKKVLSVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY- 343 (538)
T ss_pred cccccccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH-
Confidence 555544433333333 222233344555677777777888999999999999999999999999999999999988655
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 337 AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
+..+..+-...++..++.++|.++...++|++|||+..+.+++++.+..+.++..... ..+.....+.+.+...+
T Consensus 344 --~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~---~~~~~Gf~v~y~l~~ff 418 (538)
T KOG0252|consen 344 --HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ---LENTIGFVVLYSLTFFF 418 (538)
T ss_pred --HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc---ccccCceeehHHHHHHH
Confidence 4444556667788888999999999999999999999999999999999988877642 22456677888888889
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHH
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLG 496 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (540)
...+++.....+.+|.+|.+.|++..|+..+++-+|++++...+.++.+.. |+...+.+.++++++++++++
T Consensus 419 ~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--------yp~~~g~~~v~~i~~~~~~~g 490 (538)
T KOG0252|consen 419 GNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--------YPPNIGVRNVFIILAGCMLLG 490 (538)
T ss_pred HhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc--------CCccccchHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998522 456789999999999999999
Q ss_pred HHHHHhcccCCCCChhhhccccccc
Q 046667 497 LLFTFLVPESKGKSLEEMSGENQDE 521 (540)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (540)
.+..+++||+++++.+|++++.+.+
T Consensus 491 i~~T~l~pEtk~~~leei~~e~~~~ 515 (538)
T KOG0252|consen 491 ILFTLLIPETKGKSLEEISNEEESN 515 (538)
T ss_pred HheeEEeecccccCHHHhcChhhcc
Confidence 9999999999999999986654443
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=7.8e-45 Score=365.75 Aligned_cols=491 Identities=62% Similarity=1.033 Sum_probs=343.3
Q ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhh
Q 046667 10 NALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFG 89 (540)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g 89 (540)
+..++.+..+++++++.++.++.+.+++|...++.+.|.+..++.+ .+.+.++.+.+++.+.+.++..++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ig~~ig~~~~g 77 (502)
T TIGR00887 3 EEADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH-----GKGPLPSSVSAAVNGSASIGTLAGQLFFG 77 (502)
T ss_pred chhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999999999999988776421 12246677889999999999999999999
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHH
Q 046667 90 WLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 169 (540)
Q Consensus 90 ~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~ 169 (540)
+++||+|||+++.++++++.+++++++++++......++.++++|+++|++.|...+....++.|++|+++|++++++.+
T Consensus 78 ~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~ 157 (502)
T TIGR00887 78 WLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVF 157 (502)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHH
Confidence 99999999999999999999999999987653222225789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc---c-cCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHH
Q 046667 170 AMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIA---S-TAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTAL 245 (540)
Q Consensus 170 ~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~---~-~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~ 245 (540)
....+|.++++.++.++.......... .++.. + ..+..+++||++|.+.++++++.++..+++||||+|+..
T Consensus 158 ~~~~~g~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~ 233 (502)
T TIGR00887 158 AMQGFGILAGAIVALIVLAGFKHSLEA----AADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTAD 233 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccc----ccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999988775433210000 00000 0 000123579999999999888888888899999999755
Q ss_pred hhccHHHHHHHHHHHHhhhchhhHhhhh---hhhc-ccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 046667 246 VAKNAKQAASDMSKVLQVELEAEEQKIQ---ELDR-DKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKD 321 (540)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (540)
++++++++.+...+..+.+.+++.++.+ +.++ .+.+..+.++++..++..+..+.....++...+.+|+...+.|.
T Consensus 234 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~ 313 (502)
T TIGR00887 234 VAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKV 313 (502)
T ss_pred hCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHH
Confidence 5554444555555544322111111100 0001 11123344444333333344444455566666778888888999
Q ss_pred HHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 046667 322 IFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKS 401 (540)
Q Consensus 322 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (540)
++++.|+.+...+...................++.+++.+++++++||+|||+.++.+..+.+++++++.......
T Consensus 314 i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~---- 389 (502)
T TIGR00887 314 ILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL---- 389 (502)
T ss_pred HHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 9988887665322110111111122234445566777888999999999999998888877777766655432100
Q ss_pred chhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcc
Q 046667 402 NRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIG 481 (540)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g 481 (540)
..........+...+...+..++.+.+..|.+|++.|+++.|+.+.+++++++++|.+.+++.+..+.++ +++...+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~ 466 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK---GYPTGIW 466 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc---ccccccc
Confidence 0111222222223334455667788889999999999999999999999999999999999986332100 1112346
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCCCChhhhcc
Q 046667 482 VKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSG 516 (540)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (540)
+...|++++++++++.++.+++||+++++.+|+++
T Consensus 467 ~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFTLLIPETKGKSLEELSG 501 (502)
T ss_pred chHHHHHHHHHHHHHHHHheEeccCCCCCHHhhhC
Confidence 66788888888888777666789999988877654
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.8e-42 Score=350.68 Aligned_cols=451 Identities=19% Similarity=0.336 Sum_probs=333.6
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhh
Q 046667 11 ALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGW 90 (540)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~ 90 (540)
..++....+++|.++++++++.+..+++...++.++|.+.+++ +++..+.+++.+++.++.+++++++|+
T Consensus 155 ~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~----------gls~~~~g~l~s~~~lG~iiG~li~G~ 224 (742)
T TIGR01299 155 IIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDL----------CIPDSGKGMLGLIVYLGMMVGAFFWGG 224 (742)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566788899999999999999999999999999999999 899999999999999999999999999
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHH
Q 046667 91 LGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (540)
Q Consensus 91 l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (540)
++||+|||++++++++++++++++++++++ ++.++++|++.|++.|+..++..+++.|++|+++|++.+++..+
T Consensus 225 LsDR~GRR~~lii~lil~~i~~ll~afa~s------~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~ 298 (742)
T TIGR01299 225 LADKLGRKQCLLICLSVNGFFAFFSSFVQG------YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCM 298 (742)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999988 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccH
Q 046667 171 MQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNA 250 (540)
Q Consensus 171 ~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 250 (540)
+..+|.++++.++..+....+.... . .......+||+++++.++++++.++..+++||||+|+ ..+++.
T Consensus 299 ~~~iG~ila~~la~~il~~~G~~~~-------~---g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL-~~~gr~ 367 (742)
T TIGR01299 299 FWMIGGIYAAAMAWAIIPHYGWSFQ-------M---GSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF-LENGKH 367 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhc-------c---ccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHCCCH
Confidence 9999999999988877643321000 0 0001235799999999888888888888899999996 344455
Q ss_pred HHHHHHHHHHHhhhchh---hHh-----hhhh---h------hcccCC---------------ccchhhHHHhhhhhHHH
Q 046667 251 KQAASDMSKVLQVELEA---EEQ-----KIQE---L------DRDKGN---------------GYGLFSKEFLRRHGLHL 298 (540)
Q Consensus 251 ~~~~~~~~~~~~~~~~~---~~~-----~~~~---~------~~~~~~---------------~~~~~~~~~~~~~~~~~ 298 (540)
+++.+.+++..+.+... ... ..+. . ++.... .+..++..+.++..+..
T Consensus 368 ~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~t 447 (742)
T TIGR01299 368 DEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREIT 447 (742)
T ss_pred HHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHH
Confidence 66666666655432110 000 0000 0 000000 00011111222334456
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHh---c-------------------CCCcc-------------cch--------
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSAV---G-------------------WIPSA-------------KTM-------- 335 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-------------------~~~~~-------------~~~-------- 335 (540)
+.+++.|++..+.+|+...|.|.++... . +.... .+.
T Consensus 448 l~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (742)
T TIGR01299 448 IKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFE 527 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccc
Confidence 7788889999999999999999886542 0 00000 000
Q ss_pred ------------------------------------h-----h-------------------HHHHHHHHHHHHHHHHhh
Q 046667 336 ------------------------------------N-----A-------------------IQEVYKIARAQTLIALCS 355 (540)
Q Consensus 336 ------------------------------------~-----~-------------------~~~~~~~~~~~~~~~~~~ 355 (540)
. . .............+..++
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~ 607 (742)
T TIGR01299 528 DSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLA 607 (742)
T ss_pred cccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHH
Confidence 0 0 000001123345666788
Q ss_pred hhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCch
Q 046667 356 TVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435 (540)
Q Consensus 356 ~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (540)
.+++.+++++++||+|||++++.+.++.+++.+++.+... ....+++. ++.+++..+..+..+++++|++|+
T Consensus 608 ~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s-------~~~ll~~~-~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 608 VLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS-------ESAMIALL-CLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc-------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCH
Confidence 8999999999999999999999998888888777665431 22222222 233333333456778899999999
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 046667 436 RLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKS 510 (540)
Q Consensus 436 ~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (540)
+.|++++|+.+..+.+|++++|++.+.+.+ .+...+|++++++.++++++.+++||++++.
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~--------------~~~~~pf~i~a~~lll~~ll~~~LPET~~~~ 740 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVG--------------ITKAAPILFASAALACGGLLALKLPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hhhHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 999999999999999999999999998874 2345678888888888888777889988764
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=323.37 Aligned_cols=453 Identities=21% Similarity=0.292 Sum_probs=345.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhh----cccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhh
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIY----YHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLG 92 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~ 92 (540)
..++.......++++.+-++|....+++..+.+.+-. ....+...+.+.-+...+.+++++.+|.++|+++.|+++
T Consensus 5 ~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la 84 (485)
T KOG0569|consen 5 LTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLA 84 (485)
T ss_pred ccHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666677777889998888877765544322 011111111122234578889999999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHH
Q 046667 93 DKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (540)
Q Consensus 93 Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~ 172 (540)
||+|||..+.++.++..++.+++.++... +++.+++++|++.|+..|......+.++.|..|++.||....+.+.+.
T Consensus 85 ~~~GRK~~l~~~~~l~~~~~~~~~~s~~~---~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~ 161 (485)
T KOG0569|consen 85 DRFGRKNALLLSNLLAVLAALLMGLSKSA---PSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGV 161 (485)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHH
Confidence 99999999999999998888887776432 337999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHH
Q 046667 173 GFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQ 252 (540)
Q Consensus 173 ~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 252 (540)
.+|.+++..++..- .++ ....|++.+.+..+++++..+...++||||+|+..+++++++
T Consensus 162 ~~g~ll~~~~~l~~--ilG-------------------t~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 162 VIGILLGQVLGLPS--LLG-------------------TEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred HHHHHHHHHHccHH--hcC-------------------CCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHH
Confidence 99999998776433 222 244599999999999999999999999999998766888888
Q ss_pred HHHHHHHHHhhhchhhHh-----hhhhhhc---ccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 046667 253 AASDMSKVLQVELEAEEQ-----KIQELDR---DKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS 324 (540)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
+.+.+++.++.+.++++. +.++.+. ++.+.++.++++..|+. ....+.+.......+.+....|...++.
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~--~~i~~~v~~~qq~sGi~ai~~Yst~i~~ 298 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRP--LLIGIVVSFAQQFSGINAIFFYSTSIFK 298 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHH--HHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence 888888887664322211 1111111 23345678888777775 2333334444445667777888888999
Q ss_pred HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCch-
Q 046667 325 AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNR- 403 (540)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 403 (540)
+.|+.+.. +.......++..++.++++.++.||+|||++++.+..++.++.+++.............
T Consensus 299 ~aG~~~~~------------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 299 TAGFTPEE------------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred HcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 88887765 33467777788888999999999999999999999999888887776654321111111
Q ss_pred -hHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcch
Q 046667 404 -LGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGV 482 (540)
Q Consensus 404 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~ 482 (540)
+..+.........+..++.|+.|-+.+|++|++.|..+.++....+++..++....+..+.+. +|.
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-------------~g~ 433 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-------------IGP 433 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hcc
Confidence 123445555566778889999999999999999999999999999999999999999999864 343
Q ss_pred hhHHHHHHHHHHHHHHHHH-hcccCCCCChhhhccccccc
Q 046667 483 KNSLIVLGVVNLLGLLFTF-LVPESKGKSLEEMSGENQDE 521 (540)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 521 (540)
..|+++.+.+.+..++.+ ++||||+|+..|+.++.+++
T Consensus 434 -~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 434 -YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred -hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 678888888888888877 89999999999988776654
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.6e-39 Score=327.21 Aligned_cols=460 Identities=21% Similarity=0.282 Sum_probs=311.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
..+++.+.++++.++.+.++++...+++..|.+++++. ++...+.+.+..+.+++.+++.++..++++++|+++||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~G 83 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFV--APQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG 83 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhc--ccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44567788888889999999999999999999998883 3344455789999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCC------CCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFG------NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (540)
||++++++.++++++.++++++.- ......++.++++|+++|++.|...+...++++|++|+++|++++++.+.
T Consensus 84 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 84 RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 999999999999999888876310 00112256788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccH
Q 046667 171 MQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNA 250 (540)
Q Consensus 171 ~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 250 (540)
+..+|.++++.++..+...... ...+..|||+.|++.+++.++..+..+++||+|+++.. +++.
T Consensus 164 ~~~~G~~~~~~~~~~~~~~~~~---------------~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~-~~~~ 227 (479)
T PRK10077 164 AIIFGQLVVYFVNYFIARSGDA---------------SWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMS-RGKQ 227 (479)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---------------cccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH-cCCH
Confidence 9999999998887766421110 01235689999999888777766667789999987532 2233
Q ss_pred HHHHHHHHHHHhhhchhh-Hhhhhhhhc-ccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcC
Q 046667 251 KQAASDMSKVLQVELEAE-EQKIQELDR-DKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGW 328 (540)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 328 (540)
+++.+..++..+.+..++ .++.++..+ +.......+.. .............+.....++...++.|.+.++.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~ 303 (479)
T PRK10077 228 EQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMF----GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA 303 (479)
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcch----hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC
Confidence 333333332221111100 001000000 00000000000 000011111111222222344455677887777666
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHH
Q 046667 329 IPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVI 408 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (540)
+... +........+..+++.+++++++||+|||+.++.+..+.+++.+++...... .........
T Consensus 304 ~~~~------------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~---~~~~~~~~~ 368 (479)
T PRK10077 304 STDI------------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT---QAPGIVALL 368 (479)
T ss_pred CCch------------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc---CcccHHHHH
Confidence 5443 2224455666778888999999999999999999998888877766543210 011112222
Q ss_pred HHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHH
Q 046667 409 IYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIV 488 (540)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 488 (540)
...+..........|..+.++.|.+|++.|+++.|+.+..++++.++++.+++.+.+.. ...+..++...|++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~-------~~~~~~~~~~~~~~ 441 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNS-------WLVAHFHNGFSYWI 441 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-------chhhhccCccHHHH
Confidence 22222222333344677889999999999999999999999999999998887665210 00134577778888
Q ss_pred HHHHHHHHHHHHH-hcccCCCCChhhhcccccc
Q 046667 489 LGVVNLLGLLFTF-LVPESKGKSLEEMSGENQD 520 (540)
Q Consensus 489 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 520 (540)
.+++++++.++.+ +.||+|+++.+|.++..++
T Consensus 442 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 442 YGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred HHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 8877777777666 6788888887776555433
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-40 Score=296.96 Aligned_cols=405 Identities=16% Similarity=0.179 Sum_probs=316.2
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh
Q 046667 14 VAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD 93 (540)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D 93 (540)
+++.+++|+.+++.+.+++...++.+-.++.+.|.+.++. ++|.+|+|++.+++.++|.++..+.|.++|
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~----------~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD 89 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG----------GLSKTQLGILGSAFSITYGVSKFVMGVLSD 89 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4456677888999999999999999999999999999999 899999999999999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHH
Q 046667 94 KLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (540)
Q Consensus 94 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (540)
|.++|+.+.+++++.++.+++++++++ ++.+.++.+++|..+|..+|.+...+..|+|++|||+..++++.+.+
T Consensus 90 r~npr~fm~~gLilsai~nil~Gfs~s------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shN 163 (448)
T COG2271 90 RSNPRYFMAFGLILSAIVNILFGFSPS------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHN 163 (448)
T ss_pred cCCCceeehHHHHHHHHHHHHHhhhhH------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhh
Confidence 999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccH
Q 046667 174 FGILAGGIFA--LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNA 250 (540)
Q Consensus 174 ~G~~~g~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~ 250 (540)
+|..+.+++. +++.. +.+||..|++.++++++. ++.++..+|+|+..-+.+-
T Consensus 164 iGGal~~~~~~la~~~~-----------------------~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i-- 218 (448)
T COG2271 164 IGGALAPLVALLAFFAF-----------------------HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI-- 218 (448)
T ss_pred cccchHHHHHHHHHHHh-----------------------ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH--
Confidence 9999999998 55532 346999999988887764 5556778999875322111
Q ss_pred HHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCC
Q 046667 251 KQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWI 329 (540)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 329 (540)
+|. .++..+.. .++.+.+..+.++.+.+..+++ +.+|.+.+..++....-|++..|.|.++.+ .+++
T Consensus 219 e~~-------~~d~~e~~---~~~~~~~~ls~~~i~~~YVL~N--k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s 286 (448)
T COG2271 219 EEY-------RGDPLEIY---EEEKENEGLTAWQIFVKYVLKN--KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFS 286 (448)
T ss_pred HHh-------hcCchhhh---hhhccCCCccHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCC
Confidence 111 00011110 1111112245566666666655 356777777777788899999999999887 4444
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc--cchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHH
Q 046667 330 PSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKI--GRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFV 407 (540)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (540)
... +.......-.++++|++++||++||+ |||.+..+.+.+.....++.... .++.++...
T Consensus 287 ~~~------------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~-----~~~~~~~l~ 349 (448)
T COG2271 287 LVK------------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWL-----APNGSYLLD 349 (448)
T ss_pred HHH------------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHc-----CCCccHHHH
Confidence 333 34466777889999999999999996 56766544433333332222221 222344555
Q ss_pred HHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccccccCCCCCCCCcchhhHH
Q 046667 408 IIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSL 486 (540)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~ 486 (540)
.+.....++...++.-+.-....|..|++..|++.|+...++++ |.+.+....|++.| .+||...|
T Consensus 350 ~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d-------------~~gW~g~F 416 (448)
T COG2271 350 AILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD-------------TWGWDGGF 416 (448)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe-------------cCCCcchH
Confidence 55555566666667666667788999999999999999999999 99999999999984 47899999
Q ss_pred HHHHHHHHHHHHHHH
Q 046667 487 IVLGVVNLLGLLFTF 501 (540)
Q Consensus 487 ~~~~~~~~~~~~~~~ 501 (540)
++..+.++++.++..
T Consensus 417 i~~~~~a~l~~lll~ 431 (448)
T COG2271 417 IVLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888877776
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=8.5e-38 Score=313.48 Aligned_cols=414 Identities=21% Similarity=0.283 Sum_probs=274.7
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCCh--hhhhH--HHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 22 FTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPP--NVSAA--VNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~--~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
+..+..+.++.+++++|...++...|.+.+++.. +.++ ...+. +.++.++++.+++++.|+++||+||
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr 86 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFP--------GADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGR 86 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3566777889999999999999999999999832 1222 11222 2588889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhh--HHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVM--ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
|+++.+++++++++++++++++++.+.+.+ ..++++|+++|++.|+.++...+++.|++|+++||++.++...+..+|
T Consensus 87 r~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 87 QKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999993110000 138999999999999999999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHH
Q 046667 176 ILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 176 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
..+++.+...+....... ....+|||++|++.++++++.+++...+||+|++...+++.+++..
T Consensus 167 ~~lg~~~~~~~~~~~~~~---------------~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~- 230 (490)
T PRK10642 167 FVLGAGVVVLISTIVGEA---------------NFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR- 230 (490)
T ss_pred HHHHHHHHHHHHHhcCHH---------------HhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc-
Confidence 988887776665432210 0235789999999877767666666779999987321111000000
Q ss_pred HHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccc
Q 046667 256 DMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKT 334 (540)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 334 (540)
+..+ ++++.+..+.+++ +++.........++....+|....+.|.++++ .|+++..
T Consensus 231 --------------~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-- 287 (490)
T PRK10642 231 --------------EGLQ--DGPKVSFKEIATK-----HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDH-- 287 (490)
T ss_pred --------------cccc--ccccCCHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH--
Confidence 0000 0001111122221 11222222333344556777888889988854 4544322
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHH-HHhcccccccCCchhHHHHHHHHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFA-LAIPYDHWTHKSNRLGFVIIYSLT 413 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 413 (540)
+........++.+++.++.|+++||+|||+.+..+.++..++... +..... .....+....+.
T Consensus 288 ----------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 351 (490)
T PRK10642 288 ----------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS------NVIGLIFAGLLM 351 (490)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC------CCHHHHHHHHHH
Confidence 222445556777888889999999999999887776543332222 211110 111122211121
Q ss_pred HHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHH
Q 046667 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVN 493 (540)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (540)
.++......+....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+..+ ++..++++..+.+
T Consensus 352 ~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~------------~~~~~~~~~~~~~ 419 (490)
T PRK10642 352 LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ------------NLMMPAYYLMVVA 419 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchHHHHHHHHHH
Confidence 1111111223344566799999999999998777788888999999999985322 3455555566666
Q ss_pred HHHHHHHHhcccCCCCC
Q 046667 494 LLGLLFTFLVPESKGKS 510 (540)
Q Consensus 494 ~~~~~~~~~~~~~~~~~ 510 (540)
+++.+..+++||++++.
T Consensus 420 ~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 420 VIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHhccccCCC
Confidence 66666666778876553
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1e-37 Score=305.67 Aligned_cols=402 Identities=12% Similarity=0.137 Sum_probs=279.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+.+|+.+++++++++++++|+..++.+.|.+.+|+ +++.++.|++.+++.+++++++++.|+++||+|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r 73 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDL----------GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR 73 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH
Confidence 35678888889999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
+++..+++++++++++++++++ ++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 74 RWIAGIMVLWGIASTATMFATG------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 7999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAASDM 257 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~ 257 (540)
++++++++...... .+..|||+.|++.+++.++. .+..+++||+|+.. +.-.+++ .+..
T Consensus 148 ~~~~~~~l~~~~~~-----------------~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~-~~~~ 207 (412)
T TIGR02332 148 GLILSGYILALDGL-----------------MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEED-KKAL 207 (412)
T ss_pred HHHHHHHHHhCCCC-----------------CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHH-HHHH
Confidence 99999887532110 12467999999987776654 44456789988531 0000111 1111
Q ss_pred HHHHhhhc-hhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc--CCCcccc
Q 046667 258 SKVLQVEL-EAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVG--WIPSAKT 334 (540)
Q Consensus 258 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~ 334 (540)
.+..+.+. +.++.+ +...+.+......++. .+ .+.++......++....++....|.|.++++.+ .++.
T Consensus 208 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~--- 279 (412)
T TIGR02332 208 KEMIDNDQLTLEQPE-GAFAHAAMPQRSMLRE--IF--TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNI--- 279 (412)
T ss_pred HHHHHhccccccccc-cccccccccHHHHHHH--hc--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---
Confidence 11111000 000000 0000000000011111 11 123445555566666777888889999987742 2221
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ-MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLT 413 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (540)
.+........++.+++.++.++++||+++|+.. ........+..+ +.... .......... ..
T Consensus 280 ---------~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~-~~ 342 (412)
T TIGR02332 280 ---------MIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL-LASAT------DHNLIQLLGI-IM 342 (412)
T ss_pred ---------HhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH-HHHhc------CCHHHHHHHH-HH
Confidence 233356677778889999999999999977643 333333333322 22111 0111111111 11
Q ss_pred HHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHH
Q 046667 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVN 493 (540)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (540)
..++.....+..+....|.+|++.|+++.|+.+..+++|++++|.+.|.+.+..+ +|...+.+++++.
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g------------~~~~~~~~~~~~~ 410 (412)
T TIGR02332 343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG------------SFNSGLWFVAALL 410 (412)
T ss_pred HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC------------CCchhHHHHHHHH
Confidence 1222222234445566788999999999999999999999999999999986332 5777777665544
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5e-37 Score=310.10 Aligned_cols=439 Identities=25% Similarity=0.359 Sum_probs=300.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
++.+....++.++.+...++...+++..+.+..++..... .+.+.+..+.+++.+++.++..++++++|+++||+|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 101 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSA--NSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK 101 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCc--ccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH
Confidence 4445555566667788889999999999998888732111 12235689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
++++++.+++.++.+++.+..+. ..++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 102 KSLLIIALLFVIGAILMGLAAFA---LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc---cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999665442 114689999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHH
Q 046667 179 GGIFA---LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 179 g~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
++.++ ... ....+||+.|++.++..++.++..+++||+|++...+ ++.++..+
T Consensus 179 ~~~~~~~~~~~-----------------------~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 234 (481)
T TIGR00879 179 AYGFGSGKVSL-----------------------NNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGK-GRVEEARK 234 (481)
T ss_pred HHHHHHHhhcC-----------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHc-CChHHHHH
Confidence 99988 222 2356799999997777777666777899998764222 22222222
Q ss_pred HHHHHHhhhchh-hH-h------hhhh-hhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Q 046667 256 DMSKVLQVELEA-EE-Q------KIQE-LDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV 326 (540)
Q Consensus 256 ~~~~~~~~~~~~-~~-~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (540)
...+..+.+.++ +. + ..++ ..+.....+..+.+...+...+.++.....++...........+.+.+.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (481)
T TIGR00879 235 SLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA 314 (481)
T ss_pred HHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc
Confidence 222211111000 00 0 0000 0000000011111100000112233333333333333444556777777777
Q ss_pred cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC---Cch
Q 046667 327 GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK---SNR 403 (540)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 403 (540)
|++... +........++.+++.++.+++.||++||+.+..+..+.+++.+++.......... ...
T Consensus 315 g~~~~~------------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 315 GVSTDH------------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred CCCchH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 766533 23356666677788899999999999999999888777777766665322111110 012
Q ss_pred hHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchh
Q 046667 404 LGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVK 483 (540)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~ 483 (540)
........+...+...+..+..+.+..|.+|++.|+++.|+.+...+++++++|.+.+.+.+ ..++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~-------------~~~~~ 449 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE-------------SIGVG 449 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hcCcc
Confidence 33333334444445555567777888999999999999999999999999999999999985 45677
Q ss_pred hHHHHHHHHHHHHHHHHH-hcccCCCCCh
Q 046667 484 NSLIVLGVVNLLGLLFTF-LVPESKGKSL 511 (540)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 511 (540)
..|++.++++++++++.+ +.+|+++++.
T Consensus 450 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred ceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 888888888888877776 5677665543
No 10
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.6e-37 Score=308.47 Aligned_cols=430 Identities=13% Similarity=0.110 Sum_probs=289.8
Q ss_pred hhhHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHh
Q 046667 5 QLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAG 84 (540)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~ 84 (540)
..|..++.++....+..+.++..+.++++..+.++..++++.|.+.+++ +++..+.|++.+++.++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~ 80 (467)
T PRK09556 11 TLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTY----------GLSTTELGMIGLGFSITYGVG 80 (467)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHH
Confidence 3344445555555666777888889999999999999999999999999 999999999999999999999
Q ss_pred hhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhc-----cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcc
Q 046667 85 QLFFGWLGDKLGRKKVYGMTLMLMVICSIASGL-----SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKK 159 (540)
Q Consensus 85 ~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~ 159 (540)
+++.|+++||+|||+++..+.+++++++++.++ +++ ++.++++|+++|++.+...+...++++||+|++
T Consensus 81 ~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 154 (467)
T PRK09556 81 KTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVS------LGLMIALWALSGFFQSTGGPCSYSTITRWTPRR 154 (467)
T ss_pred HhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccch------HHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc
Confidence 999999999999999999988888877776665 456 799999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCC
Q 046667 160 TRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPE 238 (540)
Q Consensus 160 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~e 238 (540)
+||+++++...+.++|.++++++..++..... ..+||..|.+.+++.++. ++.+++.+|
T Consensus 155 ~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~--------------------~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 155 KRGRFLGFWNISHNLGGAGAGGVALWGANYFF--------------------DGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred ceeeeEEeeecccchhhhHHHHHHHHHHHhhc--------------------cCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999988876653221 124999988877666554 344455677
Q ss_pred ChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 046667 239 TARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLF 318 (540)
Q Consensus 239 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
+|+.. ...+.++ .. .+....+. +..++++.+..+.+++..++. +.++...+..++....+++...|
T Consensus 215 ~p~~~--~~~~~~~---~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 280 (467)
T PRK09556 215 SPEEL--GWGKAEE---IF----GEPISEED---KETESTDMTKWQIFVEYVLKN--PVIWLLCFANIFLYIVRIGIDNW 280 (467)
T ss_pred Chhhc--CCCChhh---cc----cCccchhh---hccccccCcHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 76531 1111111 00 00000000 000000001111111111221 23455555556666666777888
Q ss_pred HHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccc
Q 046667 319 QKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHW 397 (540)
Q Consensus 319 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 397 (540)
.|.++++ .|+++.+ +........++.+++.++.|+++||++||+.+........++...+....
T Consensus 281 ~p~yl~~~~g~s~~~------------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~--- 345 (467)
T PRK09556 281 SPVYAFQELGFSKED------------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH--- 345 (467)
T ss_pred HHHHHHHccCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh---
Confidence 9988765 5655443 22345556677889999999999999998876655443333322222211
Q ss_pred ccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccccccCCCCC
Q 046667 398 THKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTDAGY 476 (540)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~~~~~~~~~ 476 (540)
..+.+ ...+..+..++...+..........|.+|++.+|++.|+.+..+++ |.+++|.+.|++.|.+.++....++
T Consensus 346 --~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~ 422 (467)
T PRK09556 346 --ATSEY-MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGY 422 (467)
T ss_pred --cCcHH-HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccc
Confidence 01122 2222222222222222222234567999999999999999999997 7799999999999721110000111
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 477 PPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 477 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
...+|+..|++..++++++.+..+++
T Consensus 423 -~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 423 -TLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred -cccChHHHHHHHHHHHHHHHHHHHHH
Confidence 13578999998888888877766643
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.4e-36 Score=294.01 Aligned_cols=387 Identities=18% Similarity=0.241 Sum_probs=285.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc
Q 046667 16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL 95 (540)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~ 95 (540)
+..+++|.++.++.+..+.++++....+...|.+.+++ +.++.+.+++.+++.++..+++++.|+++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 77 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEF----------GLDVAQMGWAFSAGILGLLPGALLGGRLADRI 77 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33447888999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHH
Q 046667 96 GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 96 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
|||+++..+.++.+++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|
T Consensus 78 g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 78 GRKRILIVSVALFGLFSLATAQAWD------FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFG 151 (406)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH-HHHhCCCChhhHHHhhccHHHHH
Q 046667 176 ILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY-WRMKMPETARYTALVAKNAKQAA 254 (540)
Q Consensus 176 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~ 254 (540)
..+++.++..+. +..+||+.|++.++..++..+ ...++||+|++. .++..++..
T Consensus 152 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 206 (406)
T PRK11551 152 GALASVIGVLAA-----------------------GDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFA--QAAGAGKQR 206 (406)
T ss_pred HHHHHHHHHHHc-----------------------cccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHH--hccCcchhh
Confidence 999999887663 345699999987665554443 446689887652 111100000
Q ss_pred HHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccc
Q 046667 255 SDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKT 334 (540)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 334 (540)
+.. ....++++..+ .........+......+....+.|.++++.|+++...+
T Consensus 207 ~~~------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~ 258 (406)
T PRK11551 207 APV------------------------LRALFGEGRAT----ATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAG 258 (406)
T ss_pred hhh------------------------HHHHhhhhhhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhh
Confidence 000 00001111101 11112222333334455666678888887776655422
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTF 414 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (540)
.......++.+++.++.+++.||+|||+.+..+.....++...+.... +.+. ..+..+..
T Consensus 259 ------------~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~ 318 (406)
T PRK11551 259 ------------LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP-------SFAG-MLLAGFAA 318 (406)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC-------cHHH-HHHHHHHH
Confidence 255566677888999999999999999988876666555554443322 1222 22233333
Q ss_pred HHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHH
Q 046667 415 FFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNL 494 (540)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 494 (540)
++...+..+..+++..|.+|++.|+++.|+.+....+|..++|.+.|.+.+.. .++...++..+.+.+
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~------------~~~~~~~~~~~~~~~ 386 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG------------RSTVGVIGASIPVIL 386 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC------------CchHHHHHHHHHHHH
Confidence 33333445667788899999999999999999999999999999999998532 255566666666666
Q ss_pred HHHHHHHhc
Q 046667 495 LGLLFTFLV 503 (540)
Q Consensus 495 ~~~~~~~~~ 503 (540)
++.++.+.+
T Consensus 387 ~~~~~~~~~ 395 (406)
T PRK11551 387 VAALAALLL 395 (406)
T ss_pred HHHHHHHHH
Confidence 666555543
No 12
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=294.33 Aligned_cols=369 Identities=21% Similarity=0.262 Sum_probs=260.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
++++..+..+.++.+.++++.....+..|.+.+++ ++++.+.+++.+++.++..+++++.|+++||+|||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r 83 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADL----------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK 83 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 46667778888899999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
+++.++.+++++++++++++++ ++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 157 (426)
T PRK12307 84 PLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII 157 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH
Confidence 9999999999999999999988 7999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
++.+.+.+. +..+||+.|++..+..++........||++++.. ++..+
T Consensus 158 ~~~l~~~l~-----------------------~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~--~~~~~------- 205 (426)
T PRK12307 158 AAYFMPSFA-----------------------EAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEE--AKLSG------- 205 (426)
T ss_pred HHHHHHHHc-----------------------ccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHH--hhhhc-------
Confidence 988887763 2456999999865544443333334566654311 00000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhH
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAI 338 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 338 (540)
+.++.+. ..+.......+.++++.. +.........+......+....+.|.++++.|+++..
T Consensus 206 -----~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------ 267 (426)
T PRK12307 206 -----KGKHSQS---AWSVFSLSMKGLFNRAQF----PLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGV------ 267 (426)
T ss_pred -----ccccccc---chhhhhHHHHHHHhhchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------
Confidence 0000000 000000011122222211 1112112222222223334455677777766554332
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhh
Q 046667 339 QEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFAN 418 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (540)
.........++.+++.++.+++.||++||+.+..+.++..+..+.+..... ..........+...+..
T Consensus 268 ------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 335 (426)
T PRK12307 268 ------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ------DNYLLLGACLFGLMATN 335 (426)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc------ccHHHHHHHHHHHHHhc
Confidence 222445566778889999999999999999888777666555444332221 11221222222222222
Q ss_pred cCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 419 FGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
.+..+....++.|.+|++.|++++|+.+...++++.++|.+.|++.+
T Consensus 336 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 336 VGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred ccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 23334455677899999999999999999999999999999999985
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.2e-35 Score=291.76 Aligned_cols=416 Identities=19% Similarity=0.245 Sum_probs=264.9
Q ss_pred CCcchhhHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhh---HHHHHH
Q 046667 1 MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSA---AVNGVA 77 (540)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g---~~~s~~ 77 (540)
|+++....+++. ....+.+++..+..++++.+++++|+..++.+.|.+.+++... +.+..+.+ .+.+..
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~ 72 (432)
T PRK10406 1 MAESTVTADSKL-TSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPS-------GNTTTQLLQTAGVFAAG 72 (432)
T ss_pred CCcccccccccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCchHHHHHHHHHHHHH
Confidence 444443333222 3344556667777888899999999999999999999998310 23444443 344555
Q ss_pred HHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcc--hhhHHHHHHHHHHhhccccchhhHHHHHhhh
Q 046667 78 FCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPK--GVMATLCFFRFWLGFGIGGDYPLSATIMSEY 155 (540)
Q Consensus 78 ~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~ 155 (540)
+++..++++++|+++||+|||+++..++++++++++++++++++... .....++++|+++|++.|+.++...+++.|+
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 152 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEV 152 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHh
Confidence 55556999999999999999999999999999999999999884110 1123689999999999999999999999999
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHh
Q 046667 156 ANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMK 235 (540)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 235 (540)
+|+++|+++.++.+.+...|.++++.+...+.....+ .....+|||++|++.++++++..+....
T Consensus 153 ~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~---------------~~~~~~gWr~~F~i~~~~~ll~~~~~~~ 217 (432)
T PRK10406 153 AVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLED---------------AELREWGWRIPFALGAVLAVVALWLRRQ 217 (432)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------------HHHhccchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998889988888877666433221 0012578999999988887776666666
Q ss_pred CCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046667 236 MPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQ 315 (540)
Q Consensus 236 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
+||+|++.. ++ . ++..+..+.++++ +..+......+.....++..
T Consensus 218 ~~e~~~~~~--~~-----~----------------------~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK10406 218 LDETSQQET--RA-----L----------------------KEAGSLKGLWRNR------RAFIMVLGFTAAGSLCFYTF 262 (432)
T ss_pred CCCCchHHH--hh-----h----------------------cccccHHHHHhhH------HHHHHHHHHHHHHHHHHHHH
Confidence 788765410 00 0 0000111222211 11112222223334567777
Q ss_pred hhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 316 NLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 316 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
..|.|.++.+ .|++..+ .+. ......+...++.++.|+++||++||+.+.....+.++....+....
T Consensus 263 ~~~lp~~l~~~~g~s~~~-----------~~~-~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANV-----------ASG-IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHhcCCCHHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888754 4544322 111 33333344456677889999999999887766554433332221111
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccccccCC
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTD 473 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~~~~~~ 473 (540)
. ...+....+.+..+...... ...+..+.+.+|.+|++.|+++.|+.+..+++ .+...|.+.+.+ +.++
T Consensus 331 ~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g----- 400 (432)
T PRK10406 331 Q---NVSSPYAAFGLVMCALLIVS-FYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIG----- 400 (432)
T ss_pred H---cCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC-----
Confidence 0 00111221111111111111 11234556789999999999999999988775 355578877755 3222
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 474 AGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
.+...+++.++..+++.+..+++
T Consensus 401 -------~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 401 -------METAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred -------CCcHHHHHHHHHHHHHHHHHHHh
Confidence 24455666666666666655554
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=7.6e-36 Score=295.07 Aligned_cols=407 Identities=13% Similarity=0.110 Sum_probs=279.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
.++.++.++....++.+...+++..++..+|.+.+++ +++..+.|++.+++.+++.+++++.|+++||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g 86 (434)
T PRK11663 17 YRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADL----------GLSRSDIGLLATLFYITYGVSKFVSGIVSDRSN 86 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcC
Confidence 3455667777778888888999989999999999999 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (540)
||+++.++.++.+++.++++++++ ++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|.
T Consensus 87 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 160 (434)
T PRK11663 87 ARYFMGIGLIATGIINILFGFSSS------LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGG 160 (434)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHH
Q 046667 177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
.+++.+++.+.+ ..|||+.|++.++..++. ++..++++|+|++....+.++.+ +
T Consensus 161 ~~~~~~~~~l~~-----------------------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~ 215 (434)
T PRK11663 161 ALIPLVVGAIAL-----------------------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR--H 215 (434)
T ss_pred HHHHHHHHHHHH-----------------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc--c
Confidence 999999998853 355999999977766544 34455678887642111100000 0
Q ss_pred HHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccc
Q 046667 256 DMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKT 334 (540)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 334 (540)
+.. +..++.+..+.+..+.++....++ +.++......+.....++....+.|.++. +.|+++.+
T Consensus 216 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-- 280 (434)
T PRK11663 216 DAL-----------ELAQQQEGAGLSRKEILTKYVLLN--PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT-- 280 (434)
T ss_pred ccc-----------ccchhccccCCChhhhHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH--
Confidence 000 000000000111112222111111 12333344444444555666678888874 35665543
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc--cchhHH-HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKI--GRFAIQ-MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYS 411 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (540)
+........++.+++.++.|++.||+ ++|+.. ........+....+..... .+ ........
T Consensus 281 ----------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~ 344 (434)
T PRK11663 281 ----------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF-----AS-YVMQAACF 344 (434)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc-----cc-HHHHHHHH
Confidence 22255566677889999999999998 333332 2222222222211111111 11 11222222
Q ss_pred HHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHH
Q 046667 412 LTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGV 491 (540)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 491 (540)
+..++...+.......+..|.+|++.|+++.|+.++..++|.+++|.+.|++.| ..||+..|+..++
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~-------------~~g~~~~f~~~~~ 411 (434)
T PRK11663 345 FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE-------------IWHWTGFFVVISI 411 (434)
T ss_pred HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH-------------hcccHHHHHHHHH
Confidence 222222222222333456899999999999999999999999999999999984 5678899998888
Q ss_pred HHHHHHHHHH-hcccCCC
Q 046667 492 VNLLGLLFTF-LVPESKG 508 (540)
Q Consensus 492 ~~~~~~~~~~-~~~~~~~ 508 (540)
+++++.+..+ ..+++++
T Consensus 412 ~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 412 AAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHHHHHHhhhch
Confidence 8888776665 3444433
No 15
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3.8e-35 Score=290.00 Aligned_cols=407 Identities=19% Similarity=0.219 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHH-----HHHHHHHHHhhhhhhhhhh
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVN-----GVAFCGTLAGQLFFGWLGD 93 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~-----s~~~~~~~i~~~~~g~l~D 93 (540)
++++.+....++.+.+++|...++.+.|. +.+++++ +.++. .+++. ++.+++..+++++.|+++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~D 89 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFP--------QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGD 89 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44567788888999999999999988875 4555532 23443 34443 4556778899999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHhhccCCCCcch--hhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHH
Q 046667 94 KLGRKKVYGMTLMLMVICSIASGLSFGNSPKG--VMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM 171 (540)
Q Consensus 94 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~ 171 (540)
|+|||++++.+.++++++++++++++++.... ....++++|+++|++.|+.++....++.|++|+++|++..+..+.+
T Consensus 90 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 90 RLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999931000 0015889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHH
Q 046667 172 QGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAK 251 (540)
Q Consensus 172 ~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 251 (540)
..+|.+++..+...+....+. +....+|||++|++.+++.++........||+|++...+++. +
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~---------------~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~-~ 233 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTD---------------EQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQ-A 233 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCH---------------HHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhc-c
Confidence 999999988877776543221 002357899999998887666555556688888762111000 0
Q ss_pred HHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCC
Q 046667 252 QAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIP 330 (540)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 330 (540)
+. +++.+.. +.. +++++.........++....+|....+.+.++.+ .|.+.
T Consensus 234 ~~-----------------------~~~~~~~----~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~ 285 (438)
T PRK09952 234 AA-----------------------KKRIPVI----EAL-LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR 285 (438)
T ss_pred cc-----------------------cccCCHH----HHH-HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 00 0000000 001 1111112222223334445566666777777653 34332
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHH
Q 046667 331 SAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIY 410 (540)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (540)
.. .........+..+++.++.|+++||+|||+.+..+.++..++...+..... ..+....+...
T Consensus 286 ~~------------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 349 (438)
T PRK09952 286 EL------------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE----AQSIFWIVFFS 349 (438)
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH----cCChHHHHHHH
Confidence 21 111223334555677788999999999999888776655444333222110 01112222222
Q ss_pred HHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHH-HhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHH
Q 046667 411 SLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGK-LGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVL 489 (540)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 489 (540)
.+..++......+..+++..|.+|++.|+++.|+.+..+. +++.++|.+.+++.+..+ .+|...+.+.
T Consensus 350 ~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-----------~~~~~~~~~~ 418 (438)
T PRK09952 350 IMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-----------GSWHSVAIYL 418 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CCchHHHHHH
Confidence 2222222222345567888999999999999999776654 899999999999986332 2467777778
Q ss_pred HHHHHHHHHHHHhcccC
Q 046667 490 GVVNLLGLLFTFLVPES 506 (540)
Q Consensus 490 ~~~~~~~~~~~~~~~~~ 506 (540)
+++.+++.+..+.++++
T Consensus 419 ~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 419 LAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHcccc
Confidence 78888887777666653
No 16
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.4e-36 Score=304.75 Aligned_cols=383 Identities=20% Similarity=0.339 Sum_probs=277.3
Q ss_pred HHHHhhhhhhcccCCCCCCCCCC---hhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCC
Q 046667 44 LVTKLLGRIYYHVDGAEKPGSLP---PNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120 (540)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 120 (540)
+..+.+.+|+ +++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++++
T Consensus 110 ~~~~~i~~e~----------~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 179 (505)
T TIGR00898 110 TFSSTIVTEW----------DLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN 179 (505)
T ss_pred cccccEEEEe----------cceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 4567788888 888 899999999999999999999999999999999999999999999999999998
Q ss_pred CCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 046667 121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYE 200 (540)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~ 200 (540)
++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.
T Consensus 180 ------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------------- 240 (505)
T TIGR00898 180 ------YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------------- 240 (505)
T ss_pred ------HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------------
Confidence 7999999999999999999999999999999999999999999999999999998887662
Q ss_pred CCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhch---hhHhhh--hhh
Q 046667 201 DDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELE---AEEQKI--QEL 275 (540)
Q Consensus 201 ~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~ 275 (540)
+||+.|++.+++.++..+..+++||+|+|+. .+++.+++.+..++..+.+.. .+..+. ++.
T Consensus 241 -------------~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (505)
T TIGR00898 241 -------------DWRWLQLAVSLPTFLFFLLSWFVPESPRWLI-SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKD 306 (505)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHhcCCChHHHH-HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhh
Confidence 2999999988888777777788999999963 334444554444444332211 110000 010
Q ss_pred -h--cccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHH
Q 046667 276 -D--RDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIA 352 (540)
Q Consensus 276 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
+ +.+....+.++++..+. ..+.....++.....+++...+.+.+ +.. ........
T Consensus 307 ~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~ 364 (505)
T TIGR00898 307 LSSSKKQYSFLDLFRTPNLRK---TTLCLMMLWFTTAFSYYGLVLDLGNL----GGN---------------IYLDLFIS 364 (505)
T ss_pred hhhccCCCcHHHHhCChHHHH---HHHHHHHHHHHHHHHHHHHhcccccc----CCC---------------hHHHHHHH
Confidence 0 11112334444443332 23333444555445555544443322 111 01133445
Q ss_pred HhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeeccc
Q 046667 353 LCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEI 432 (540)
Q Consensus 353 ~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (540)
.+..+++.++.+++.||+|||+.+..+.++.+++.+++..... ...+.... ..+...++.....+..+.+.+|.
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-----DLYFLRTA-LAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC-----CchHHHHH-HHHHHHHHHHHHHHHHHHHhccc
Confidence 5677788889999999999999999988888877766655431 11122222 22222222333345677888999
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCCCChh
Q 046667 433 FPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKSLE 512 (540)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (540)
+|++.|+++.|+.+..+.+|++++|.+.+ +. ..++..++.+++++.+++.+..+++||+++++.+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~ 503 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG--------------EKWLFLPLVLFGGLALLAGILTLFLPETKGVPLP 503 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH--------------HHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 99999999999999999999999999998 43 2345677888888888888877788998877554
No 17
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-35 Score=269.18 Aligned_cols=377 Identities=16% Similarity=0.166 Sum_probs=288.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
++..+..++.+.++.|..+.+...+..++|++.+|+ +.|..+.|++.|+|.++++++.++...+.||+.|
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl----------~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~R 77 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADL----------GVSEGAAGQLITAYALGVALGAPLLALLTGRLER 77 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 345577888889999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (540)
|++++..+.++.++.+++++++| |+.++++|++.|++.|..++...++..+..|+++|++++++...+..++.+
T Consensus 78 r~lLl~~l~lFi~~n~l~alAp~------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v 151 (394)
T COG2814 78 RRLLLGLLALFIVSNLLSALAPS------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATV 151 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHH
Q 046667 178 AGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASD 256 (540)
Q Consensus 178 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~ 256 (540)
+|.+++.++.+.++ ||..|++.+..+++.++. +..+| |+. ..++...+
T Consensus 152 ~GvPLGt~ig~~~G-----------------------WR~~F~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~---- 200 (394)
T COG2814 152 LGVPLGTFLGQLFG-----------------------WRATFLAIAVLALLALLLLWKLLP--PSE--ISGSLPGP---- 200 (394)
T ss_pred HhccHHHHHHHHhh-----------------------HHHHHHHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcc----
Confidence 99999999976655 999999988888876655 46678 221 00000000
Q ss_pred HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccch
Q 046667 257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTM 335 (540)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 335 (540)
..+..+.++++. ++......++.....|....|...++++ .|++++..
T Consensus 201 ----------------------~~~~~~~l~~p~-------v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~v-- 249 (394)
T COG2814 201 ----------------------LRTLLRLLRRPG-------VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAV-- 249 (394)
T ss_pred ----------------------hhHHHHHhcCch-------HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHH--
Confidence 000111222222 2223333333334455555555555554 56555542
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHH
Q 046667 336 NAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFF 415 (540)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (540)
....+..+++.++|++++|++.|| +.|+.+.....+.++.+..+.+... . ........+..+
T Consensus 250 ----------s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~------~-~~~~~~~~~~wg 311 (394)
T COG2814 250 ----------SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGA------S-PALALALLFLWG 311 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcc------h-HHHHHHHHHHHH
Confidence 237788889999999999999999 8888888887777777777666542 2 222222222233
Q ss_pred HhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHH
Q 046667 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLL 495 (540)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 495 (540)
+..............+ .-++.++.+.++.....++|..+|..+.|.+.| ++|+....++.+++.++
T Consensus 312 ~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~-------------~~g~~~~~~~~a~l~~~ 377 (394)
T COG2814 312 FAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD-------------ALGYAATGWVGAALLLL 377 (394)
T ss_pred HHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hhchHHHHHHHHHHHHH
Confidence 3222222222233444 235679999999999999999999999999995 57899999999999888
Q ss_pred HHHHHHhcc
Q 046667 496 GLLFTFLVP 504 (540)
Q Consensus 496 ~~~~~~~~~ 504 (540)
+.++.+...
T Consensus 378 a~~~~~~~~ 386 (394)
T COG2814 378 ALLLALLSA 386 (394)
T ss_pred HHHHHHHHH
Confidence 888777443
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6.8e-35 Score=287.67 Aligned_cols=384 Identities=17% Similarity=0.224 Sum_probs=270.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
.++++|+.+..++++.+.++++....+++.|.+.+++ +.+..+.+++.+++.++..+++++.|+++||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g 75 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF----------GLTTVDAASLISAALISRWFGALMFGLWGDRYG 75 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5667889999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (540)
||++++.+.++.++++++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.
T Consensus 76 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 149 (405)
T TIGR00891 76 RRLPMVTSIVLFSAGTLACGFAPG------YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGA 149 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999988 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHH
Q 046667 177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASD 256 (540)
Q Consensus 177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (540)
.+++.+++.+.+..+ .+||+.|++.++..++.++....+||++++...++ ++++..+.
T Consensus 150 ~~~~~l~~~l~~~~~---------------------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 207 (405)
T TIGR00891 150 VVAAQVYSLVVPVWG---------------------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHA-GKALVRTM 207 (405)
T ss_pred HHHHHHHHHHHHhcC---------------------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhh-hhhhhhhH
Confidence 999999988864322 24999999877776666666677888876521111 11111111
Q ss_pred HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccch
Q 046667 257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTM 335 (540)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 335 (540)
.++..+.+... ....+ +.....+.. .++.+..+...................+.|.++.+ .|+++.+
T Consensus 208 ~~~~~~~~~~~-~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--- 275 (405)
T TIGR00891 208 VDILYGGEHRI-ANIVM-------TLAAAMVQS-AGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHT--- 275 (405)
T ss_pred HHHHhccchhh-hhhhh-------hhhHHhhhh-hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHH---
Confidence 11111100000 00000 000000111 01111112222222222233333444555666543 4554433
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHH
Q 046667 336 NAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFF 415 (540)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (540)
.........++.+++.++.+++.||+|||+.+..+..+..+....+.... .+ .....+..+..+
T Consensus 276 ---------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~ 339 (405)
T TIGR00891 276 ---------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG------AN-VAVLGLGLFFQQ 339 (405)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC------Cc-hHHHHHHHHHHH
Confidence 22245566677888999999999999999988877665433332222111 11 222222222223
Q ss_pred HhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhc
Q 046667 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQS 466 (540)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~ 466 (540)
+...+..+....++.|.+|++.|++++|+.+...+++..++|.+.|.+.|.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333334456667889999999999999999999999999999999999963
No 19
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3e-35 Score=295.97 Aligned_cols=440 Identities=24% Similarity=0.325 Sum_probs=321.9
Q ss_pred hHHHHHHHHHHHHHHHHHHh--HhHHHHHHHhhhhhhcccCCCCCCCCCCh--hhhhHHHHHHHHHHHHhhhhhhhhhhh
Q 046667 19 WYHFTAIIVAGMGFFTDAYD--LFCISLVTKLLGRIYYHVDGAEKPGSLPP--NVSAAVNGVAFCGTLAGQLFFGWLGDK 94 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~Dr 94 (540)
...........++.+..+++ ....+++...+.++..... ...+. .+.+|+.++..++.++++++.|+++|+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~ 115 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD-----LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR 115 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777788888886 5667777777776541111 01222 567999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHH
Q 046667 95 LGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (540)
Q Consensus 95 ~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (540)
+|||+.++++.+++.+++++++++++ +++++++|++.|+|.|....+.+.+++|..|++.||...+..+....+
T Consensus 116 ~GRk~~l~~~~~~~~iG~ii~~~a~~------~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~ 189 (513)
T KOG0254|consen 116 IGRKKTLLLAVVLFLIGAIIIALAPS------WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITI 189 (513)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHH
Q 046667 175 GILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAA 254 (540)
Q Consensus 175 G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 254 (540)
|..++..++....+ . .++||..+.+..+++++..+..+++||+|+|+ .+.++.++++
T Consensus 190 Gi~~~~~~~~~~~~---------------------~-~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L-~~~g~~~~a~ 246 (513)
T KOG0254|consen 190 GILLGYCINYGTSK---------------------V-YAGWRIPLGLALIPAVILALGMLFLPESPRWL-IEKGRLEEAK 246 (513)
T ss_pred HHHHHHHHhhhhcc---------------------C-CccHHHHHHHHHHHHHHHHHHHHhCCCChHHH-HHcCChHHHH
Confidence 99999666555421 0 15799999999999998877788899999996 3455666677
Q ss_pred HHHHHHHhhhchh---hHhhhh-----hhh-cccCC-ccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 046667 255 SDMSKVLQVELEA---EEQKIQ-----ELD-RDKGN-GYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS 324 (540)
Q Consensus 255 ~~~~~~~~~~~~~---~~~~~~-----~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
+.+.+..+.+..+ +.++.+ +.. .+... ..++++ +..++ +..+...+..+....++.....|.+.+++
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~--~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRK--RLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHH--HHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 7777666622111 111111 000 01111 122222 21111 23344555555555667777888999988
Q ss_pred HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc-----
Q 046667 325 AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTH----- 399 (540)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----- 399 (540)
..|..... ........+..+++..++..+.||+|||+.++.+...+.++.++++........
T Consensus 324 ~~g~~~~~-------------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~ 390 (513)
T KOG0254|consen 324 SAGLKSDT-------------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSS 390 (513)
T ss_pred hcCCCCch-------------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 87765432 114455556666777778999999999999999999999999888766532211
Q ss_pred CCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCC
Q 046667 400 KSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPG 479 (540)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~ 479 (540)
....+..+....+....+..+..++.|.+..|.+|.+.|+++.++....+++...+....+..+.+ .
T Consensus 391 ~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~-------------~ 457 (513)
T KOG0254|consen 391 KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE-------------A 457 (513)
T ss_pred cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-------------h
Confidence 122344455555566677778889999999999999999999999999999988887777777764 1
Q ss_pred cchhhHHHHHHHHHHHHHH-HHH-hcccCCCCChhhhccccccc
Q 046667 480 IGVKNSLIVLGVVNLLGLL-FTF-LVPESKGKSLEEMSGENQDE 521 (540)
Q Consensus 480 ~g~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 521 (540)
.+....|..++.++.+..+ +.+ ++||+|+++.+|+++...+.
T Consensus 458 ~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 458 LGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred ccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 1223456666666665555 444 89999999999887755443
No 20
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.8e-34 Score=253.04 Aligned_cols=434 Identities=22% Similarity=0.407 Sum_probs=325.7
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhh
Q 046667 8 VLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLF 87 (540)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~ 87 (540)
+++..+.....+++|...+....+...+.+.....+.+.|.+...+ +.+..+..++....+.|..+++..
T Consensus 63 v~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w----------~~s~~q~~llt~~v~~gmllga~~ 132 (528)
T KOG0253|consen 63 VDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVW----------GPSEGQAPLLTLSVFLGMLVGAMV 132 (528)
T ss_pred ehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh----------chhhhhhhHHHHHHHhhhhhhhhh
Confidence 3455666778889999999999999999988888889999999999 899999999999999999999999
Q ss_pred hhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHH
Q 046667 88 FGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA 167 (540)
Q Consensus 88 ~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~ 167 (540)
+|.++|++|||+.+.+..+...+...+.+.++| +..+++.|.+.|+|.|+ .|...++-.|..|..+|..-+-.
T Consensus 133 w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn------f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~ 205 (528)
T KOG0253|consen 133 WGLSADTIGRRKGFNLTFLVTGVFGVISGASPN------FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVM 205 (528)
T ss_pred hheehhhhhcchhhhhhHHHHHHHHHhhcCCCC------eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhH
Confidence 999999999999999999999999999999999 79999999999999999 89999999999999999887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhh
Q 046667 168 VFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVA 247 (540)
Q Consensus 168 ~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~ 247 (540)
. ..+.+|.++...++...... .||||.......+..+.....+++|||||++ ..+
T Consensus 206 ~-~~waig~v~ea~law~vm~~-----------------------~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~-~~~ 260 (528)
T KOG0253|consen 206 S-FFWAIGQVFEALLAWGVMSN-----------------------FGWRYLLFTSSTPLMFAARFLVWVYESPRFY-LAK 260 (528)
T ss_pred H-HHHHHHHHHHHHHHHHHHHh-----------------------hhHHHHHHHHHhHHHHHHHHHhhcccCcchh-hhc
Confidence 6 89999999999999888644 4599999998888888888888999999997 455
Q ss_pred ccHHHHHHHHHHHHhhhch-----------hhHhhhhh--h--------hcccCCccchhhHHHhhhhhHHHHHHHHHHH
Q 046667 248 KNAKQAASDMSKVLQVELE-----------AEEQKIQE--L--------DRDKGNGYGLFSKEFLRRHGLHLLGTTSTWF 306 (540)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (540)
++++++.+.+.++...+.. .++.+.++ . ++...+...++. +.+|+ ..+.....|+
T Consensus 261 G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls-p~lrk---ttlllw~iwf 336 (528)
T KOG0253|consen 261 GDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS-PKLRK---TTLLLWRIWF 336 (528)
T ss_pred CChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC-hHHHH---HHHHHHHHHH
Confidence 6666676666665433211 01111111 0 011112223333 33333 3455667788
Q ss_pred HHHHHHHHHhhhHHHHHHHhcC-------CCcccchh-hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHH
Q 046667 307 LLDIAFYSQNLFQKDIFSAVGW-------IPSAKTMN-AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~g~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~ 378 (540)
...+.+|+.......+++.-.- .+.+.... .-.........-.+...+..++|.++.++++||+|||+.+..
T Consensus 337 gnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal 416 (528)
T KOG0253|consen 337 GNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMAL 416 (528)
T ss_pred hhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHH
Confidence 8888999998888777665221 11111100 000011112335566677889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH
Q 046667 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF 458 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 458 (540)
.+++.+++.+.+..... .....++.+..-.+ ..+.+.+.|+|..|++|+..|+++.|.+...+++|+++.|+
T Consensus 417 ~l~~f~iflfll~~c~~-------rn~~tvllf~araf-isg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~ 488 (528)
T KOG0253|consen 417 SLILFGIFLFLLTTCKT-------RNAYTVLLFTARAF-ISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPV 488 (528)
T ss_pred HHHHHHHHHHHHHHhcC-------cchhHHHHHHHHHH-HhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhH
Confidence 99998888887766542 22222333332223 33345688999999999999999999999999999999999
Q ss_pred HHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc-cCCCCC
Q 046667 459 GFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP-ESKGKS 510 (540)
Q Consensus 459 i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 510 (540)
+. ...+ .....+..+.+++++++.+...++| |+|+|.
T Consensus 489 iA-~~~e--------------~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 489 IA-MRAE--------------LSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred HH-HHhc--------------cceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 98 3332 2334566778888888888887554 788775
No 21
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.9e-34 Score=290.30 Aligned_cols=406 Identities=16% Similarity=0.215 Sum_probs=272.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
++++|+.+..++++.+.+.++....++..|.+.+++ +++..+.+++.+.+.++..+++++.|+++||+||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 84 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRYGR 84 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 456777888888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (540)
|++++.+.++.+++.++++++++ ++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (496)
T PRK03893 85 RLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAV 158 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHH
Q 046667 178 AGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDM 257 (540)
Q Consensus 178 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~ 257 (540)
+++.+++.+.+ ..+||+.|++.++..++.++.....||++++....+ ++++..+..
T Consensus 159 ~~~~~~~~l~~-----------------------~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~ 214 (496)
T PRK03893 159 VAAQVYSLVVP-----------------------VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHA-GKAPVRTMV 214 (496)
T ss_pred HHHHHHHHHhc-----------------------cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhcc-ccccchhHH
Confidence 99999998743 456999999866655555555556788765421111 110000000
Q ss_pred HHHHhhhchhhHhhhh----------hhhcccCCccch-------------hhHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 046667 258 SKVLQVELEAEEQKIQ----------ELDRDKGNGYGL-------------FSKEFLRRHGLHLLGTTSTWFLLDIAFYS 314 (540)
Q Consensus 258 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (540)
+.....+ ........ .........+.. +..+...+............+......+.
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (496)
T PRK03893 215 DILYRGE-HRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWP 293 (496)
T ss_pred HHHhcch-hHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccch
Confidence 0000000 00000000 000000000000 00000000000011111111111111123
Q ss_pred HhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhc
Q 046667 315 QNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIP 393 (540)
Q Consensus 315 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 393 (540)
...+.|.+++ +.|+++.+ .........++.+++.++.+++.||+|||+.+..+..+..+..+.+...
T Consensus 294 ~~~~lp~~l~~~~g~~~~~------------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 361 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHT------------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI 361 (496)
T ss_pred HHHHHHHHHHhhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 4456777774 55655443 2235566677788899999999999999998877765555444333222
Q ss_pred ccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCC
Q 046667 394 YDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTD 473 (540)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~ 473 (540)
. ...........+.......+..+...+++.|.+|++.|++++|+.+....+|+.++|.+.|.+.+
T Consensus 362 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~-------- 427 (496)
T PRK03893 362 G------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ-------- 427 (496)
T ss_pred c------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc--------
Confidence 1 11222222222222222333344556678899999999999999999999999999999999984
Q ss_pred CCCCCCcchhhHHHHHHHHHHH
Q 046667 474 AGYPPGIGVKNSLIVLGVVNLL 495 (540)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~ 495 (540)
.+|+...+...++.+.+
T Consensus 428 -----~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 428 -----RLDLGTALASLSFSLTF 444 (496)
T ss_pred -----cCChHHHHHHHHHHHHH
Confidence 56777776555444433
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1e-33 Score=276.68 Aligned_cols=374 Identities=11% Similarity=0.078 Sum_probs=264.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+++|..++.+.++.+....+.....+.+|.+.+++ |.|+.+.|++.+++.+++.+++++.|+++||+|||
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 74 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSF----------HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR 74 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 34455555556655555555555667789999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
+++..+.++.++++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i 148 (390)
T PRK03545 75 KLLIGLFVLFIASHVLSALAWN------FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL 148 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 7999999999999999888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDM 257 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~ 257 (540)
++++++.+.+. .|||+.|++.++.+++..+. ...+||+|+. + ++ ..++
T Consensus 149 g~~l~~~l~~~-----------------------~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~-~~---~~~~- 197 (390)
T PRK03545 149 GLPLGRVIGQY-----------------------LGWRTTFLAIGGGALITLLLLIKLLPLLPSE---H-SG---SLKS- 197 (390)
T ss_pred HhhHHHHHHHH-----------------------hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC---C-cc---hHHH-
Confidence 99999988543 45999999987776665443 3446665431 0 00 0000
Q ss_pred HHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchh
Q 046667 258 SKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMN 336 (540)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 336 (540)
..+.++++.. +......++.....+....+.+.++.+ .|+++..
T Consensus 198 ------------------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~---- 242 (390)
T PRK03545 198 ------------------------LPLLFRRPAL-------VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF---- 242 (390)
T ss_pred ------------------------HHHHHhCcHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH----
Confidence 0011122211 111112222222333334455555544 4555443
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 337 AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
.........++.+++.++.+++.||++||... .+..+..++...+.... ..........+..+.
T Consensus 243 --------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~l~g~ 306 (390)
T PRK03545 243 --------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA-------NSEWHLSVLSIFWGI 306 (390)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh-------chHHHHHHHHHHHHH
Confidence 22245556677888999999999999987654 44444444333332211 112222233333333
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHH
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLG 496 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (540)
......+.....+.+..| +.|++++|+.+...++|..+||.+.|.+. +.+|++..|...+++.+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~-------------~~~g~~~~~~~~~~~~~~~ 372 (390)
T PRK03545 307 AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVS-------------LHLGLSSIGYVGAALALAA 372 (390)
T ss_pred HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccChhHHHHHHHHHHHHH
Confidence 333333444556667766 57899999999999999999999999999 4678899999999888888
Q ss_pred HHHHHhcc
Q 046667 497 LLFTFLVP 504 (540)
Q Consensus 497 ~~~~~~~~ 504 (540)
.++.....
T Consensus 373 ~~~~~~~~ 380 (390)
T PRK03545 373 LVWSILIF 380 (390)
T ss_pred HHHHHHHc
Confidence 87776433
No 23
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.6e-33 Score=274.73 Aligned_cols=378 Identities=10% Similarity=0.044 Sum_probs=271.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHH
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKV 100 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~ 100 (540)
.|.....++++.+..... ..+++++|.+++|+ ++|.++.+++.+++.+++.+++++.|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~ 76 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQAS----------GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS 76 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH
Confidence 455555555555444333 66789999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHH
Q 046667 101 YGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (540)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (540)
+..++.+++++.++++++++ ++.++++|+++|++.+...+....++.+++| ++|+++++++.++..+|..+++
T Consensus 77 l~~~~~l~~~~~~~~~~a~~------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 77 VAISLLLIAVGALMRELYPQ------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHCcc------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 7899999999999999999999999999997 7899999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhC-CCChhhHHHhhccHHHHHHHHHH
Q 046667 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKM-PETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
.+++++.+.. .+||+.+.+.++..++..+..+.. ++.|+. + +
T Consensus 150 ~~~~~l~~~~----------------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~-------- 192 (393)
T PRK09705 150 AITPWLVQHS----------------------ETWYQTLAWWALPAVVALFAWWWQSAREVAS-----S--H-------- 192 (393)
T ss_pred HHHHHHHHhc----------------------CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----c--c--------
Confidence 9998875332 259998877655544443333222 221110 0 0
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQ 339 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (540)
+++....+.++++ ..+......++....++....+.|.++.+.|+++...
T Consensus 193 -----------------~~~~~~~~~l~~~-------~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~a------ 242 (393)
T PRK09705 193 -----------------KTTTTPVRVVFTP-------RAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYS------ 242 (393)
T ss_pred -----------------CCCcCCcccccCH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhh------
Confidence 0000111111221 1222333344445567777788888888777665542
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhc
Q 046667 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANF 419 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (540)
........++.+++.++.+++.||++||+....+..+..++..++..... +.. .... +..++...
T Consensus 243 ------g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~-~~~~--~l~g~g~g 307 (393)
T PRK09705 243 ------GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL------QLP-VLWA--MVCGLGLG 307 (393)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc------hHH-HHHH--HHHHHhcc
Confidence 22566677888999999999999999999888877666666554432221 111 1111 12222223
Q ss_pred CCccceeeeecccC-chhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 046667 420 GPNATTFVVPAEIF-PARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLL 498 (540)
Q Consensus 420 ~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (540)
...+.......+.. |++.++++.|+.+..++++..++|.+.|++.|..| ++...|++.++++++..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g------------~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG------------NYLMDWAFHALCVVGLMI 375 (393)
T ss_pred chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchHHHHHHHHHHHHHHH
Confidence 33444444555655 46789999999999999999999999999997554 467777777777776666
Q ss_pred HHH-hcccCCCCC
Q 046667 499 FTF-LVPESKGKS 510 (540)
Q Consensus 499 ~~~-~~~~~~~~~ 510 (540)
+.+ +.+|++++.
T Consensus 376 ~~~~~~~~~~~~~ 388 (393)
T PRK09705 376 ITLRFAPARFPQL 388 (393)
T ss_pred HHHHhccccccch
Confidence 655 667776553
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=277.72 Aligned_cols=367 Identities=17% Similarity=0.211 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHH-HHH-----HHHHHHhhhhhhhhhhh
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVN-GVA-----FCGTLAGQLFFGWLGDK 94 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~~~~~i~~~~~g~l~Dr 94 (540)
+++....++++.+++++|+..+++..|.+.+++ +.++.+.+.+. +.. .++..+++++.|+++||
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr 82 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTF----------FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR 82 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 345788888899999999999999999999999 77776655433 322 23335789999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccCCCCcchhhH--------HHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHH
Q 046667 95 LGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMA--------TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIA 166 (540)
Q Consensus 95 ~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~ 166 (540)
+|||++++.+.+++.+++++++++++ ++ .++++|+++|++.+...+....++.|++|+++|+++++
T Consensus 83 ~Grr~~l~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~ 156 (434)
T PRK15075 83 VGRRKGLIVTLSIMASGTLLIAFVPG------YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTS 156 (434)
T ss_pred hchHHHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHH
Confidence 99999999999999999999999998 44 46899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHh
Q 046667 167 AVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALV 246 (540)
Q Consensus 167 ~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~ 246 (540)
+...+.++|..+++.+++.+....... ..+..|||++|++..+..++..+.....||++++. .
T Consensus 157 ~~~~~~~~g~~~g~~~g~~l~~~~~~~---------------~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~--~ 219 (434)
T PRK15075 157 WQSASQQVAVVFAALLGYLLNQWLSPA---------------QMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFL--A 219 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHH--H
Confidence 999999999999998888875433210 01357899999986544333222223344433210 0
Q ss_pred hccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-
Q 046667 247 AKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA- 325 (540)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (540)
+++ +.+..+.++.. +++++.........+.....++....|.|.++++
T Consensus 220 ~~~-----------------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 268 (434)
T PRK15075 220 RKH-----------------------------RPSMREIFRSL--AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV 268 (434)
T ss_pred hhh-----------------------------ccccccHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 00001111111 1111112222223333445567777888988876
Q ss_pred hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHH-HHhcccccccCCchh
Q 046667 326 VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFA-LAIPYDHWTHKSNRL 404 (540)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 404 (540)
.|+++.+ +........++.+++.++.|+++||+|||+.+..+..+..+.... +..... ... .
T Consensus 269 ~g~~~~~------------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~----~~~-~ 331 (434)
T PRK15075 269 LHLSAAD------------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA----APS-F 331 (434)
T ss_pred cCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc----CCc-h
Confidence 5665433 223555666777888999999999999999877665443322211 111110 111 1
Q ss_pred HHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccc
Q 046667 405 GFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~ 468 (540)
.......+..++......+..+.+..|.+|++.|+++.|+.+.++.. ++.++|.+.+.+.|..+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 11111111111112222334456778999999999999997666654 58889999999997443
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.6e-33 Score=270.04 Aligned_cols=357 Identities=12% Similarity=0.047 Sum_probs=246.2
Q ss_pred HHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHh
Q 046667 36 AYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIAS 115 (540)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~ 115 (540)
......+++.+|.+.+|+ ++|..+.|++.+++.+++.+++++.|+++||+|||+++..++.....+.+..
T Consensus 4 ~~~~~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDI----------DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 445567789999999999 9999999999999999999999999999999999998766655554443333
Q ss_pred hccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 046667 116 GLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFK 195 (540)
Q Consensus 116 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 195 (540)
...++ ++.++++|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++.++.+
T Consensus 74 ~~~~~------~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------- 139 (368)
T TIGR00903 74 LDPFN------YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT------- 139 (368)
T ss_pred HHhcc------HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 33356 79999999999999886 56667777999999999999999999999999999999999853
Q ss_pred CCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhh
Q 046667 196 APAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQE 274 (540)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (540)
..|||+.|++.++++++. ++.++++||+|++. .+.. +.. + ..+
T Consensus 140 ----------------~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~--~~~~--~~~----~-----------~~~- 183 (368)
T TIGR00903 140 ----------------AGGLQLLIIPIAAVAAAGIILVLAALPALPFQA--AEGF--GFK----D-----------AVK- 183 (368)
T ss_pred ----------------ccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCc--chH----H-----------HHH-
Confidence 456999999966666554 44567789988752 1100 000 0 000
Q ss_pred hhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHh
Q 046667 275 LDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALC 354 (540)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
+..+.+++ +.++.....+++....+++...|.|.++++.|++.. .+. ......+
T Consensus 184 ------~~~~ll~~-------~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~------------~~~-~~~l~~~ 237 (368)
T TIGR00903 184 ------EFGALAGR-------KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI------------AGD-AVALAIL 237 (368)
T ss_pred ------HHHHHHcC-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH------------HHH-HHHHHHH
Confidence 01112222 234556666777778888889999999987654321 111 2222222
Q ss_pred hhhhhHHHHHHHHhhccch---hHHHH-HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeec
Q 046667 355 STVPGYWFTVAFIDKIGRF---AIQMM-GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPA 430 (540)
Q Consensus 355 ~~~~~~~~~~~l~d~~g~r---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (540)
... +..+++.||..|| +.... ...+.++....+.... +.... +......+++.....+..+++.+
T Consensus 238 ~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~-------~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 306 (368)
T TIGR00903 238 AGL---IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL-------NRLAL-FAFIGIAGLLMLPAYAIIMDWIG 306 (368)
T ss_pred HHH---HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc-------ccHHH-HHHHHHHHHhhhhhHHHHHHHHH
Confidence 222 3346777877543 33222 3333333333332211 12222 22222233334444456778899
Q ss_pred ccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 431 EIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 431 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
|.+|++.|+++.|+.+..++++++++|.+.+.+.. +....|.++++..+++.+...+.+
T Consensus 307 ~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---------------~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 307 KFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---------------SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred HhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---------------CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999988872 566778888888888777765434
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.7e-33 Score=277.14 Aligned_cols=389 Identities=22% Similarity=0.340 Sum_probs=269.4
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh
Q 046667 14 VAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD 93 (540)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D 93 (540)
+.+.+++++..+..+.+..+..+++....++..|.+.+++ +.+..+.+++.+++.++..++.++.|+++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 77 (398)
T TIGR00895 8 KQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEW----------GLDPVQLGFLFSAGLIGMAFGALFFGPLAD 77 (398)
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3444556677777777888888888888999999999998 899999999999999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHH
Q 046667 94 KLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (540)
Q Consensus 94 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (540)
|+|||+++..+.++.+++.+++.++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 151 (398)
T TIGR00895 78 RIGRKRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYP 151 (398)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHccc------hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHH
Confidence 999999999999999999999999888 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHH-HHHHHHhCCCChhhHHHhhccHHH
Q 046667 174 FGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAAL-TYYWRMKMPETARYTALVAKNAKQ 252 (540)
Q Consensus 174 ~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~ 252 (540)
+|..+++.+++.+.+ ..+||+.|++.++..++ ..+..+++||++++. .+++.++
T Consensus 152 ~g~~~~~~~~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 206 (398)
T TIGR00895 152 IGAAVGGFLAGWLIP-----------------------VFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFL--VSKRPET 206 (398)
T ss_pred HHHHHHHHHHHHHhh-----------------------cccceeehhhhhhHHHHHHHHHHHhCCCCChHH--HhcCHHH
Confidence 999999999988843 45699999987644444 444556789887753 2222222
Q ss_pred HHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcc
Q 046667 253 AASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSA 332 (540)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 332 (540)
..+..++.......++.++.++..++.....+..+....++..+..+......++....++....+.|.+.++.++++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 286 (398)
T TIGR00895 207 VRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL 286 (398)
T ss_pred HHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 22222221111110000000000000001111111111111112223333334444455666667778776666665543
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHH
Q 046667 333 KTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSL 412 (540)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (540)
.........++.+++.++.+++.||++||... ....+.++...++.... .+... .....+
T Consensus 287 ------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~ 346 (398)
T TIGR00895 287 ------------AATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGSTL------FSPTL-LLLLGA 346 (398)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHHh------hCHHH-HHHHHH
Confidence 22355666677889999999999999998443 33333333333332211 11222 222233
Q ss_pred HHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 046667 413 TFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYL 463 (540)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~ 463 (540)
..++......+..+++..|.+|++.|+++.|+.+....+|..++|.+.|++
T Consensus 347 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 347 IAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333334566778899999999999999999999999999999999875
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=4.1e-33 Score=277.09 Aligned_cols=417 Identities=14% Similarity=0.114 Sum_probs=269.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
++++|.++..+.+.....+.++..++..+|.+.+ . +++..+.+++.+++.+++++++++.|+++||+||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~----------g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~ 92 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-Q----------GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP 92 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-c----------CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC
Confidence 3345666666667777777887778888888764 3 6899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (540)
|++++.+.++.+++.+++++++.. ..+++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|..
T Consensus 93 k~~l~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 93 RVFLPAGLILAAAVMLFMGFVPWA--TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred chhHHHHHHHHHHHHHHHHhhhcc--cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999988876411 011678899999999999998888889999999999999999999999998864
Q ss_pred -HHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHH
Q 046667 178 -AGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 178 -~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
.+++++..+.. ..+||+.|++.+++.++. ++..+++||+|+.. ..+++++..+
T Consensus 171 ~~~~l~~~~~~~-----------------------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~ 225 (452)
T PRK11273 171 LPPLLFLLGMAW-----------------------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSC--GLPPIEEYKN 225 (452)
T ss_pred HHHHHHHHHHHH-----------------------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhc--CCCChhhhhh
Confidence 45554333321 125999999977766654 44556788887641 1111111000
Q ss_pred HHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccc
Q 046667 256 DMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKT 334 (540)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 334 (540)
+.. ++ .++.++++.+..+.+++...+. +.++...+..++.....++...+.|.++++ .|+++..
T Consensus 226 ~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~-- 290 (452)
T PRK11273 226 DYP--------DD---YNEKHEQELTAKQIFMQYVLPN--KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK-- 290 (452)
T ss_pred ccc--------cc---cccccCCCccHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH--
Confidence 000 00 0000000011111111111111 234444444444455567777889998876 4554333
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc--cchhHHH-HHHHHHHHHHHHHHhcccccccCCchhHHHHHHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKI--GRFAIQM-MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYS 411 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (540)
+........++.+++.++.|+++||+ +||.... ....+..++...+.... ..+.+... ...
T Consensus 291 ----------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~-~~~ 354 (452)
T PRK11273 291 ----------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP-----AGNPTVDM-ACM 354 (452)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc-----ccChHHHH-HHH
Confidence 22244556677788899999999999 4454322 22222222222221111 01112121 122
Q ss_pred HHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHH-HHHHHHHHhhccccccCCCCCCCCcchhhHHHHHH
Q 046667 412 LTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIV-GAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLG 490 (540)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i-~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 490 (540)
+..+....+.......+..|.+|++.||+++|+.+...++|+.+ +|.+.|.+.| ..||+..|++++
T Consensus 355 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~-------------~~g~~~~f~~~~ 421 (452)
T PRK11273 355 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD-------------FFGWDGGFMVMI 421 (452)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHH-------------HhcchHHHHHHH
Confidence 22222222222223345679999999999999999999998765 7999999985 567889998888
Q ss_pred HHHHHHHHHHHhcccCCCCChhhhcc
Q 046667 491 VVNLLGLLFTFLVPESKGKSLEEMSG 516 (540)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (540)
++++++.+....+...++|+.+|..+
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (452)
T PRK11273 422 GGSILAVILLIVVMIGEKRHHEELLQ 447 (452)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHh
Confidence 88888877777555555555555433
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=7e-33 Score=278.08 Aligned_cols=383 Identities=15% Similarity=0.097 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
++|..+..++++.++..+|.+.++.++|.+.+++ |.+.++.+|+.+++.+++.++++++|+++||+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l----------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~ 72 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL----------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR 72 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4577889999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhc-CcccchhHHHHHHHHHHHHHHH
Q 046667 100 VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
+++.+.+++++++++++++++ ++.++++|+++|++.+...+.....+.+++ |+++|++++++......+|..+
T Consensus 73 ~l~~~~~~~~~~~~~~~~a~~------~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 73 LLMLGGTLFGLASLAAAFSPT------ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 799999999999999998888888887776 6789999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH-HHHhCCCChhhHHHhhccHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY-WRMKMPETARYTALVAKNAKQAASDM 257 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~ 257 (540)
||.+++++.+ ..+||+.|++....+++.++ ..+++||+|+.. .++.+........
T Consensus 147 gp~lgg~l~~-----------------------~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~~~~d~~g~~~~~ 202 (495)
T PRK14995 147 GPLVGGILLE-----------------------HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR-DQPLNLGHALMLI 202 (495)
T ss_pred HHHHHHHhhc-----------------------cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCCChHhHHHHH
Confidence 9999999953 45699999997766665444 345677765421 1111111110000
Q ss_pred HH----HHhhh--chh--hH-----------------hhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHH
Q 046667 258 SK----VLQVE--LEA--EE-----------------QKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAF 312 (540)
Q Consensus 258 ~~----~~~~~--~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
.. ....+ ... .. ...+...+++....+.++++ .+.......+.....+
T Consensus 203 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~-------~~~~~~~~~~~~~~~~ 275 (495)
T PRK14995 203 VAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHR-------IILSGVVMAMTAMITL 275 (495)
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCc-------ccHHHHHHHHHHHHHH
Confidence 00 00000 000 00 00000001111112222222 2223333344444556
Q ss_pred HHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 046667 313 YSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALA 391 (540)
Q Consensus 313 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~ 391 (540)
++...+.|.+++. .|+++.+ +.....+..++..++.++.|++.||+|+|+.+..+..+.+++.+.+.
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~------------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~ 343 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLE------------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLA 343 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 6666777877765 4665554 33467777788888999999999999999988888777766665554
Q ss_pred hcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhc
Q 046667 392 IPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQS 466 (540)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~ 466 (540)
.... ....+. .....+..+++.....+.......+..|++.++.+.++.++..++|+.+|+.+.+.+.+.
T Consensus 344 ~~~~----~~~~~~-~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 344 MTDF----STQQWQ-AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HhcC----CCchHH-HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221 112222 222233333333333344556667889999999999999999999999999999998764
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5.8e-33 Score=276.74 Aligned_cols=401 Identities=14% Similarity=0.091 Sum_probs=257.4
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhh
Q 046667 11 ALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGW 90 (540)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~ 90 (540)
+.+....++++++.+...++..+...++....++..|.+.+++ +++..+.+++.+++.+++.+++++.|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------gls~~~~g~~~~~~~~~~~~~~~~~G~ 93 (476)
T PLN00028 24 EFRLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNL----------NLTKSDIGNAGIASVSGSIFSRLAMGP 93 (476)
T ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445566666667777777777788889999999999 999999999999999999999999999
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHH
Q 046667 91 LGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (540)
Q Consensus 91 l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (540)
++||+|||+++..+.++++++.++++++++ ++.++++|++.|++.+.. .....++.|++|+++|++++++...
T Consensus 94 l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~ 166 (476)
T PLN00028 94 VCDLYGPRYGSAFLLMLTAPAVFCMSLVSS------ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAG 166 (476)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHH
Confidence 999999999999999999999999999988 688999999999998764 4566789999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC-CChhhHHHhhcc
Q 046667 171 MQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP-ETARYTALVAKN 249 (540)
Q Consensus 171 ~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~-esp~~~~~~~~~ 249 (540)
..++|..+++.+...+....... ...+..|||+.|++.+++.++..+..++++ +.|+..
T Consensus 167 ~~~~g~~~~~~~~~~i~~~~~~~--------------~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~------ 226 (476)
T PLN00028 167 WGNLGGGVTQLLMPLVFPLIKDA--------------GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN------ 226 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--------------CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc------
Confidence 88888888877776654432210 001235799999998877766555544443 444310
Q ss_pred HHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcC
Q 046667 250 AKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGW 328 (540)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 328 (540)
.++..+. . +.++.+..+.++..... +..+.....++......+....+.|.++.+ .|+
T Consensus 227 ~~~~~~~-------~-----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 285 (476)
T PLN00028 227 YRELKKS-------G-----------TMPKDSFSKVLRYGVTN---YRTWILALTYGYSFGVELTMDNIIAEYFYDRFGL 285 (476)
T ss_pred hhhHHhc-------C-----------ccccccHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC
Confidence 0000000 0 00000001111111111 122333333333333344455566666544 355
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchh-------HHHHHHHHHHHHHHHHHhcccccccCC
Q 046667 329 IPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFA-------IQMMGFFFMTVFMFALAIPYDHWTHKS 401 (540)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (540)
++.. +........++.+++.+++|+++||++||+ .......+.+++.+++....
T Consensus 286 s~~~------------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~------- 346 (476)
T PLN00028 286 SLET------------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN------- 346 (476)
T ss_pred CHHH------------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc-------
Confidence 4333 333566667788889999999999998652 22222222222222221111
Q ss_pred chhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcc
Q 046667 402 NRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIG 481 (540)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g 481 (540)
+.. ......+..++......+..+++..+..| +.+|++.|+.+..+.+|++++|.+.+ .+ +..+
T Consensus 347 ~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~--~~------------~~~~ 410 (476)
T PLN00028 347 SLG-AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF--TG------------SSYS 410 (476)
T ss_pred hHH-HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH--hc------------CCcc
Confidence 111 11222222222222223345566677654 67999999998887788777777654 11 2346
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcc
Q 046667 482 VKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
|+..|++.+++.+++.++.++.+
T Consensus 411 y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 411 TETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HhhHHHHHHHHHHHHHHHHHhee
Confidence 88999999988888888777654
No 30
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.9e-40 Score=331.17 Aligned_cols=435 Identities=29% Similarity=0.452 Sum_probs=307.9
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhhhhhcccCC-CCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLLGRIYYHVDG-AEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
+..++.+.+++|....+...+.......+... ...+.+.+..+.+++.++..+|..+|+++.|+++||+|||+.++++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~ 83 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISA 83 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 34566799999999988888776643332222 22222235678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC---CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH
Q 046667 106 MLMVICSIASGLSF---GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF 182 (540)
Q Consensus 106 ~~~~i~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 182 (540)
++..+++++.++++ + ++.++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..+
T Consensus 84 ~~~~i~~~~~~~~~~~~~------~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~ 157 (451)
T PF00083_consen 84 LLMIIGSILIAFAPSYNN------FWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLI 157 (451)
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999 7 79999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHh
Q 046667 183 ALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQ 262 (540)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (540)
+..+.... ++.+||..+.+.++++++..+..+++||||+|+ ..+++.+|+++..++..+
T Consensus 158 ~~~~~~~~--------------------~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL-~~~~~~~~A~~~l~~~~~ 216 (451)
T PF00083_consen 158 GYIVSYYS--------------------DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWL-LSKGRDEEAEKVLRKLRG 216 (451)
T ss_pred cccccccc--------------------cccccccccccccccccccccccccccccccee-cccccccccccccccccc
Confidence 76552211 135699999999999888777778899999997 444555577766666443
Q ss_pred hhchhhHhhhh-----hhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhh
Q 046667 263 VELEAEEQKIQ-----ELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNA 337 (540)
Q Consensus 263 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 337 (540)
.+.++++.+.+ +.++.+....+.++++..+++ .........+.....++....+.+.++++.+..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~----- 289 (451)
T PF00083_consen 217 KEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKR--LLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSF----- 289 (451)
T ss_pred cccccccccccccccccccccceeeeecccccccccc--cccccccccccccccccccccccccccccccccccc-----
Confidence 32222111111 111111223445555432221 122222222222233344555666666665555441
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCC--chhHHHHHHHHHHH
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKS--NRLGFVIIYSLTFF 415 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 415 (540)
.......+..+++.+++.++.||+|||+.++.+...++++.+.+..........+ .....+....+...
T Consensus 290 ---------~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~ 360 (451)
T PF00083_consen 290 ---------LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFA 360 (451)
T ss_pred ---------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccc
Confidence 1334444566667777789999999999999998888877776651111111111 12223333333344
Q ss_pred HhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHH
Q 046667 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLL 495 (540)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 495 (540)
....++.++.+.+..|.+|++.|+++.|+....+++++++++.+.+.+.+ ..+....+.+.++++++
T Consensus 361 ~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~-------------~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 361 FFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN-------------NLGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-------------cccccccchhhHHHHHH
Confidence 55556778888999999999999999999999999999999999888874 33334556666666666
Q ss_pred HHHHHH-hcccCCCCChhhhccc
Q 046667 496 GLLFTF-LVPESKGKSLEEMSGE 517 (540)
Q Consensus 496 ~~~~~~-~~~~~~~~~~~~~~~~ 517 (540)
+.++.+ ++|||++++.+|+++.
T Consensus 428 ~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 428 AIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHhheeEEEeeCCCCCHHHHHhh
Confidence 666665 8999999999998764
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=8.9e-33 Score=271.36 Aligned_cols=377 Identities=15% Similarity=0.046 Sum_probs=260.8
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH
Q 046667 23 TAIIVAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY 101 (540)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~ 101 (540)
+.+....+..+...++.....+.+|. +.+++ +.|+.+.|++.+++.+++.+++++.|+++||+|||+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL----------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 34444556677777777888888886 57788 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCC--cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLMVICSIASGLSFGNS--PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
+.+.++.++++++++++.... ....++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 164 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG 164 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH
Confidence 999999988877665542100 001256899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
+.+++.+.+ ..|||+.+++..+..++..+.....|++++. +++++
T Consensus 165 ~~l~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------- 209 (399)
T PRK05122 165 APLGVLLYH-----------------------WGGLAGLGLLIMLLALLGLLLARPRPAVPPV-----KGERL------- 209 (399)
T ss_pred HHHHHHHHH-----------------------cccHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----Cccch-------
Confidence 999998854 3459999887666554443333222322110 00000
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQ 339 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (540)
+..+.+++. +............+.....+.+.++.+.++. .
T Consensus 210 ---------------------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 250 (399)
T PRK05122 210 ---------------------PFRRVLGRV---------WPYGMGLALASIGFGTIATFITLYYAARGWD--G------- 250 (399)
T ss_pred ---------------------hHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--c-------
Confidence 000000100 0001111122233444445556665554441 1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhc
Q 046667 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANF 419 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (540)
.........++.+++.++.+++.||+++|+.+..+..+.+++..++.... +.+.. .+..+..+++..
T Consensus 251 -----~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~l~G~~~~ 317 (399)
T PRK05122 251 -----AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP-------SPWMA-LIGAALTGFGFS 317 (399)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-------cHHHH-HHHHHHHHHhHH
Confidence 11133445566677888999999999999988887777776665555432 22222 222333333333
Q ss_pred CCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 046667 420 GPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLF 499 (540)
Q Consensus 420 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 499 (540)
...+.......|..|++.|+++.|+.+....+|..+++.+.|.+.+ ..||+..+++.+++++++.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-------------~~g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 318 LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS-------------WFGYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HcCHHHHHHHHHHHHHHHHHH
Confidence 3334444556788999999999999999999999999999999984 567899999888888888777
Q ss_pred HHhcccCCCC
Q 046667 500 TFLVPESKGK 509 (540)
Q Consensus 500 ~~~~~~~~~~ 509 (540)
.++.++++++
T Consensus 385 ~~~~~~~~~~ 394 (399)
T PRK05122 385 TWLLYRRAPR 394 (399)
T ss_pred HHHhcccccc
Confidence 7666554443
No 32
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2e-32 Score=267.74 Aligned_cols=377 Identities=11% Similarity=0.080 Sum_probs=271.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
.+++....+.++.+..+.+...+++.+|.+.+++ ++|.++.+++.+.+.+++.+++++.|++.||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~ 73 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYF----------NLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR 73 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3456777778888999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 100 VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
++..+.++.+++.++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++
T Consensus 74 ~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 74 QLIFGFALMILAVAGLMFSHS------LALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcch------HHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888 78999999999999999999999999999999999999999988899999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
|.+.+.+.. +..+||+.|.+.+++.++..++.++ .+.|+. .++++ +
T Consensus 148 ~~~~~~l~~----------------------~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~-~-------- 193 (394)
T PRK03699 148 PIIAAYLLA----------------------RSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP-K-------- 193 (394)
T ss_pred HHHHHHHHh----------------------ccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc-c--------
Confidence 988877642 2356999999877766655444332 222221 00000 0
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAI 338 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 338 (540)
+..+.. +.. .+ +.++......++.....+....|.|.++++ .|+++.+.
T Consensus 194 --------------~~~~~~-------~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~----- 243 (394)
T PRK03699 194 --------------ADKPVA-------KEK-WG---IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDA----- 243 (394)
T ss_pred --------------ccCccc-------ccc-CC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHh-----
Confidence 000000 000 01 122333344444445566777888988854 56655442
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhh
Q 046667 339 QEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFAN 418 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (540)
........++.+++.++.++++||+++|+.+.....+..+...++.... +.... ....+..++..
T Consensus 244 -------~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~G~~~ 308 (394)
T PRK03699 244 -------GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD-------DPSHL-LYAILGLGFFS 308 (394)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC-------CchHH-HHHHHHHHHHH
Confidence 2244555667788999999999999999988776666555444443222 12222 22223333333
Q ss_pred cCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 046667 419 FGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLL 498 (540)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (540)
.+..+...++..|..|. .++...+......++|..++|.+.|++.| ..|++..++..+++++++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~-------------~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 309 SAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVA-------------HFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHH-------------HhCchhhhhhhHHHHHHHHH
Confidence 33445555556666654 36777888989999999999999999985 45777888887777777766
Q ss_pred HHHhccc
Q 046667 499 FTFLVPE 505 (540)
Q Consensus 499 ~~~~~~~ 505 (540)
.....++
T Consensus 375 ~~~~~~~ 381 (394)
T PRK03699 375 MCILLGF 381 (394)
T ss_pred HHHHHHH
Confidence 5554443
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=8.4e-33 Score=272.17 Aligned_cols=387 Identities=16% Similarity=0.173 Sum_probs=266.8
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVIC 111 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~ 111 (540)
++...+++..++...|.+.+++ +.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 72 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDL----------GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF 72 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhh----------CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH
Confidence 4566788888999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 112 SIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
.++++++++ ++.++++|++.|++.+...+....++.|++|+++|++++++.+...++|.++++.+++.+.+
T Consensus 73 ~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 143 (399)
T TIGR00893 73 TGLQAFAGA------YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI--- 143 (399)
T ss_pred HHHHHHHcC------HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---
Confidence 999999988 79999999999999999999999999999999999999999999999999999999998753
Q ss_pred hccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHh
Q 046667 192 AAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQ 270 (540)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (540)
..+||+.|++.++..++..+. .++.||+|+.. +...+++......+.. . +.+
T Consensus 144 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~----~~~ 196 (399)
T TIGR00893 144 --------------------HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA--KWLTEEEKYIVVGGLL-A----EQQ 196 (399)
T ss_pred --------------------hCCchHHHHHHHHHHHHHHHHhhheecCCCCcc--ccCCHHHHhhcchhhc-c----ccc
Confidence 345999999977776665444 44567665431 1111111110000000 0 000
Q ss_pred hhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHH
Q 046667 271 KIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQT 349 (540)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 349 (540)
+.++.+..+....+.++++ .++......++..........+.|.++.+ .++++.. .....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 257 (399)
T TIGR00893 197 GKGPSTPKKYQIKELLKDR-------RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------------AGFMA 257 (399)
T ss_pred cccccCCCccchHHHhcCH-------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------------hhHHH
Confidence 0000000111111222221 23334444455555566666677777654 3443332 22255
Q ss_pred HHHHhhhhhhHHHHHHHHhhccchhHHH-HHHHHHHHH---HHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccce
Q 046667 350 LIALCSTVPGYWFTVAFIDKIGRFAIQM-MGFFFMTVF---MFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATT 425 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~l~d~~g~r~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (540)
....++.+++.++.+++.||++||+... .......++ ......... .. ........ .........+..+..
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~~~~~~ 332 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN---YV-NIPYAALA-LVALGFFGLGAGAIG 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc---cc-hhHHHHHH-HHHHHHhchhhhhHH
Confidence 5666777889999999999999986211 111111111 111111110 00 11222222 222222333356788
Q ss_pred eeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHH
Q 046667 426 FVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIG-VKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 501 (540)
+++..|.+|++.|+++.|+.+.+.++|..++|.+.|.+.+ ..| ++..+.+.+++.+++.+..+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 333 WALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA-------------TTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc-------------CCCchhHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999984 445 78888888887777766554
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-32 Score=269.11 Aligned_cols=368 Identities=16% Similarity=0.098 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 26 IVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
....+..+..+. +...++..|.+.+++ +++.++.|++.+++.+++.+++++.|+++||+|||+++..+.
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~ 75 (377)
T TIGR00890 7 VGTVIMCFTSGY-VYTWTLLAPPLGRYF----------GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGG 75 (377)
T ss_pred HHHHHHHHHhhH-HhhhhhHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhH
Confidence 333333444443 556788999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 046667 106 MLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALI 185 (540)
Q Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 185 (540)
++.+++.++++++++ ++.++++|++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++...
T Consensus 76 ~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (377)
T TIGR00890 76 ILYGLGFTFYAIADS------LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITS 148 (377)
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHH
Confidence 999999999999998 7999999999999999888888999999997 579999999999999998876666555
Q ss_pred HHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhh
Q 046667 186 VSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVE 264 (540)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (540)
+.+ ..+||+.|++.++..++..+. .++++|+|+.. .+++.+.
T Consensus 149 ~~~-----------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------ 191 (377)
T TIGR00890 149 VIN-----------------------LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL--IKTNIEV------------ 191 (377)
T ss_pred HHh-----------------------cccHHHHHHHHHHHHHHHHHHHHHheecCchhc--cccCccc------------
Confidence 532 346999999988777665544 34455544320 0000000
Q ss_pred chhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHH
Q 046667 265 LEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKI 344 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (540)
++ ++.+..+.++++. .+......+...........+.+.+.++.++++..
T Consensus 192 -~~----------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 241 (377)
T TIGR00890 192 -SV----------KDYTVWEMLRTPQ-------FWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------------ 241 (377)
T ss_pred -ch----------hhhhHHHHHcCcc-------HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------------
Confidence 00 0000011112111 11122222222222222333344454555543322
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
.........++.+++.++.+++.||++||+.+..+..+..++.+.+..... ..........+..++......+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM------LNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc------chhHHHHHHHHHHHHHhccchhc
Confidence 222555666778889999999999999999988888777777665554331 11111212222222333333345
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (540)
...+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+ ..||+..|.+.+++.+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-------------~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 316 FPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT-------------EIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred cHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh-------------hhchhhHHHHHHHHHHHhc
Confidence 55678899999999999999999999999999999999984 5688888888887777654
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.2e-32 Score=275.63 Aligned_cols=415 Identities=14% Similarity=0.094 Sum_probs=277.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhccc------------CCCCCCCCCChhhhhHHHHHHHHHHHH
Q 046667 16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHV------------DGAEKPGSLPPNVSAAVNGVAFCGTLA 83 (540)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~s~~~~g~~~s~~~~~~~i 83 (540)
...+.+|.++.++.++....+.|+..++.+.+.+.++-... +..+.+.+++..+.|++.+++.+++.+
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 34566788888888999999999999999988776521100 011225689999999999999999999
Q ss_pred hhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhcc--CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccc
Q 046667 84 GQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLS--FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR 161 (540)
Q Consensus 84 ~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r 161 (540)
++++.|+++||+|||+++..+.++++++++++.++ .+ ++.+++.|+++|++.+...+....++.||+|+++|
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r 165 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG------IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKER 165 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC------chHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHH
Confidence 99999999999999999999999999998887554 34 57899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCCh
Q 046667 162 GAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETA 240 (540)
Q Consensus 162 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp 240 (540)
++++++...+..+|.++++++++.+.+.. .+||+.|++.++..++..+.+ .+.+|+|
T Consensus 166 ~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----------------------~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 166 SRLLGMSTSGFQLGTFIFLPISGWLCESW----------------------GGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------------CCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999998885321 269999999888776655544 4566777
Q ss_pred hhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 046667 241 RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQK 320 (540)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (540)
+.. ++.+ +++.+...+. .+ +. +++.+....+++...+ +.++......++....++....|.|
T Consensus 224 ~~~--~~~~-~~~~~~i~~~----~~-------~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp 285 (465)
T TIGR00894 224 SIH--PCIS-KFEKKYINSS----LQ-------GQ-KGSTRQSLPIKAIPKS---LPVWAIWFAIFGHFWLYTILPTYLP 285 (465)
T ss_pred ccC--CCCC-HHHHHHHHhh----cc-------cc-cCCCCCCCCHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 531 1111 1111111100 00 00 0000001112221111 2345556666666677788888999
Q ss_pred HHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH--------HHHHHHHHHHHHHHH
Q 046667 321 DIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ--------MMGFFFMTVFMFALA 391 (540)
Q Consensus 321 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~--------~~~~~~~~~~~~~~~ 391 (540)
.++.+ .|.+... +........++.+++.+++|+++||+++|+.. ..+..........+.
T Consensus 286 ~~l~~~~g~s~~~------------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (465)
T TIGR00894 286 TFISWVLRVSGKE------------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYA 353 (465)
T ss_pred HHHHHHhCcChHH------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 4554433 22255556677788889999999997644211 111111111111111
Q ss_pred hcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 046667 392 IPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTK 471 (540)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~ 471 (540)
... . .......+....+. +.......+..+....|..|+ .+|.+.|+.++.+.+++.++|.+.|.+.+..+
T Consensus 354 ~~~--~--~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--- 424 (465)
T TIGR00894 354 LPY--L--SAAFYLTIIILTLA-NAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDS--- 424 (465)
T ss_pred HHH--c--CCchHHHHHHHHHH-HHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC---
Confidence 111 0 01122222222222 222222233444555677665 79999999999999999999999998875221
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 472 TDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 472 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
..+|...|.+.+++.+++.++.....
T Consensus 425 -------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 425 -------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 13588889888888888876665443
No 36
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.6e-33 Score=276.83 Aligned_cols=399 Identities=14% Similarity=0.079 Sum_probs=264.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc
Q 046667 16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL 95 (540)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~ 95 (540)
+...++|.++..+.+...........++...|.+.+++ +.+.++.+++.+.+.++..++.++.|+++||+
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~ 81 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIF----------QATYSETAWISSIMLAVLYAGGPISSILVNRF 81 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHh----------CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc
Confidence 33455677777777776655556666788899999999 99999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHH-HHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHH
Q 046667 96 GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCF-FRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (540)
Q Consensus 96 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (540)
|||++++.+.++.++++++++++++ ++.+++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+..+
T Consensus 82 g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 82 GCRPVVIAGGLLASLGMILASFSSN------VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPV 154 (455)
T ss_pred CchHHHHhhHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccH
Confidence 9999999999999999999999888 677654 5799999998877888889999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhC-CCChhhHHHhhccHHHH
Q 046667 175 GILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKM-PETARYTALVAKNAKQA 253 (540)
Q Consensus 175 G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~ 253 (540)
|..+++.+++.+.+. .|||+.|++.+++.++..+..+++ ++.+.. ...+.+++
T Consensus 155 g~~~~~~l~~~l~~~-----------------------~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~- 208 (455)
T TIGR00892 155 FLSTLAPLNQYLFES-----------------------FGWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVSKSKSK- 208 (455)
T ss_pred HHHHHHHHHHHHHHH-----------------------hChHHHHHHHHHHHHHHHHHHHHhCCCCccc--cccccccc-
Confidence 999999999888654 349999999887766554444333 332211 00000000
Q ss_pred HHHHHHHHhhhchhhHhhhhhhhcccCC--ccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCc
Q 046667 254 ASDMSKVLQVELEAEEQKIQELDRDKGN--GYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPS 331 (540)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 331 (540)
+. ..+....++... +...++..+ ..+.++++ .++......+.....++....+.+.+.++.++++.
T Consensus 209 -~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~ 276 (455)
T TIGR00892 209 -EG---LPPDGSTKKLSK-KSTAEKINRFLDFSLFTHR-------GFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEY 276 (455)
T ss_pred -cc---CCCCCccccccc-cchhhhhhhhcchHHhcCc-------hHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHH
Confidence 00 000000000000 000000000 01112211 23333333444445556666677777777666544
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc--cchhHHHHHH--HHHHHHHHHHHhcccccccCCchhHHH
Q 046667 332 AKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKI--GRFAIQMMGF--FFMTVFMFALAIPYDHWTHKSNRLGFV 407 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~--g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (540)
. +........++.+++.++.+++.||. ++|+...+.. ++.+++.+.+.... + ...+
T Consensus 277 ~------------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-------~-~~~~ 336 (455)
T TIGR00892 277 E------------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-------D-YTGL 336 (455)
T ss_pred H------------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-------h-HHHH
Confidence 4 22255556677788888999999973 3343333322 22222222222211 2 2223
Q ss_pred HHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHH
Q 046667 408 IIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLI 487 (540)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 487 (540)
.+..+..++......+...+++.|.+|++.++++.|+.+....+|.+++|.+.|.+.+..+ +|+..|+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g------------~~~~~f~ 404 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK------------NYKYIFY 404 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC------------CcchHHH
Confidence 3333344444444456667788899999999999999999999999999999999985332 5778888
Q ss_pred HHHHHHHHHHHHHH
Q 046667 488 VLGVVNLLGLLFTF 501 (540)
Q Consensus 488 ~~~~~~~~~~~~~~ 501 (540)
+.+++.+++.++..
T Consensus 405 ~~~~~~li~~~~~~ 418 (455)
T TIGR00892 405 ASGSIVVSAGLFLA 418 (455)
T ss_pred HhhHHHHHHHHHHH
Confidence 87777766655443
No 37
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=8.4e-32 Score=265.67 Aligned_cols=381 Identities=10% Similarity=-0.017 Sum_probs=262.1
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVIC 111 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~ 111 (540)
.+...+......+.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMM----------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHH
Confidence 3444555566678888888888 789999999999999999999999999999999999999888887776
Q ss_pred HHHhhc-----cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 112 SIASGL-----SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 112 ~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
.+..+. .++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.....++|..+|+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 96 FIGLALNAFLPEPS------LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 665442 334 688899999999998888899999999999999999999999999999999999999988
Q ss_pred HHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhch
Q 046667 187 SSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELE 266 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (540)
.+.. +|++.|++.++..++..+..+.+||+++.. +++ ++..+...
T Consensus 170 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~--~~~~~~~~-------- 214 (417)
T PRK10489 170 IAAG-----------------------GVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR--EHPLRSLL-------- 214 (417)
T ss_pred HHHH-----------------------hhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc--ccchHHHH--------
Confidence 6543 399999987777766666666677764321 000 00000000
Q ss_pred hhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHH
Q 046667 267 AEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIA 345 (540)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 345 (540)
+ .....++++..+ .... ..++. ........+.|.+.++ .|.++.. .
T Consensus 215 ------~-------~~~~~~~~~~~~----~~~~---~~~~~-~~~~~~~~~~p~~~~~~~g~~~~~------------~ 261 (417)
T PRK10489 215 ------A-------GFRFLLASPVVG----GIAL---LGGLL-TMASAVRVLYPALADEVWQMGAAQ------------I 261 (417)
T ss_pred ------H-------HHHHHHcChHHH----HHHH---HHHHH-HHHHhHHHhhHHHHHhccCCChhH------------h
Confidence 0 000011111111 1111 11111 1123445566777666 5554433 2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccce
Q 046667 346 RAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATT 425 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (540)
........++.+++.++.+++.||.++++.+..+..+.+++.+.+.... .+....+..+..+++.....+..
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--------MWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 2245556677888899999999998777777777766666655544322 12222223333333333333455
Q ss_pred eeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH-HHHHhcc
Q 046667 426 FVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL-LFTFLVP 504 (540)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 504 (540)
.+++.|..|++.||+++|+.+...++|..++|.+.|.+.+ ..|+...++..+++.++.. +....++
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA-------------MMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH-------------HhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 6788899999999999999999999999999999999995 4566667766665555544 4444678
Q ss_pred cCCCCChhhhccc
Q 046667 505 ESKGKSLEEMSGE 517 (540)
Q Consensus 505 ~~~~~~~~~~~~~ 517 (540)
+.|+++.+|.+++
T Consensus 401 ~~~~~~~~~~~~~ 413 (417)
T PRK10489 401 ELRRFRQTPPEVD 413 (417)
T ss_pred cccccccccccCC
Confidence 7777666555443
No 38
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=5.6e-31 Score=264.30 Aligned_cols=381 Identities=12% Similarity=0.065 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
.++.++++.++..++...+++..|.+.+++ +.+..+.+++.+.+.++..++.+++|+++||+|||++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSL----------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 345566778888899999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+.++.+++.++++++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT------LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHHHHHHHHHhCC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999998887 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCChhhHHHhhccHHHHHHHHH----
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETARYTALVAKNAKQAASDMS---- 258 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~---- 258 (540)
+.+.+. .+||+.|++.....++..+.. ...|+.+.. ..+.+.........
T Consensus 155 g~l~~~-----------------------~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~~~ 209 (471)
T PRK10504 155 GLLVEY-----------------------ASWHWIFLINIPVGIIGAIATLMLMPNYTMQ--TRRFDLSGFLLLAVGMAT 209 (471)
T ss_pred HHHHhh-----------------------ccHHHHHHHHHHHHHHHHHHHHHhCCCcccc--CCCCChHHHHHHHHHHHH
Confidence 998643 459999999776665554443 444544321 11111100000000
Q ss_pred HHH--hhhch---hh----------------HhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 046667 259 KVL--QVELE---AE----------------EQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNL 317 (540)
Q Consensus 259 ~~~--~~~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (540)
... +.... .. ....++..+++....+.++++. +.......++....+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~l~~~~~~~~~~~~~~~ 282 (471)
T PRK10504 210 LTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRT-------FSLGLAGSFAGRIGSGMLPF 282 (471)
T ss_pred HHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccc-------hHHHHHHHHHHHHHHHHHHH
Confidence 000 00000 00 0000000001111112222221 12222222333333444455
Q ss_pred hHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 046667 318 FQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDH 396 (540)
Q Consensus 318 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 396 (540)
+.|.+++. .|.++.. ......+..++.+++.++.+++.||+|+|+.+..+..+.++...++.....
T Consensus 283 ~~~~~~~~~~g~~~~~------------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~- 349 (471)
T PRK10504 283 MTPVFLQIGLGFSPFH------------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL- 349 (471)
T ss_pred HHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc-
Confidence 66766664 4544332 223556666777777788999999999999998888777766655544321
Q ss_pred cccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 046667 397 WTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDK 469 (540)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~ 469 (540)
...........+..+.+.....+....+..+..|++.++.+.|+.++...+|..+++.+.|.+.+..+.
T Consensus 350 ----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 350 ----LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111221222222222222222344556677889999999999999999999999999999999887654
No 39
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=6.1e-31 Score=256.29 Aligned_cols=369 Identities=13% Similarity=0.131 Sum_probs=253.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
..|..+..+.+..+..........+.+|.+.+++ +.++++.++..+++.++..+++++.|+++||+|||+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~ 86 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDL----------GISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY 86 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH
Confidence 3566666666665555555556667789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 100 VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
++..+.++.+++.++++++++ ++.++++|+++|++.+...+...+++.|++|+++|+++.++...+.++|..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig 160 (394)
T PRK10213 87 VVILFAVLLTLSCLLVSFANS------FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA 160 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCh------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCChhhHHHhhccHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
+++++.+.+ ..|||+.|++.++.+++..+.. ...||+|++. ++. +
T Consensus 161 ~~l~~~l~~-----------------------~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~---~~~-~------- 206 (394)
T PRK10213 161 APLGSFLGE-----------------------LIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP---SHQ-K------- 206 (394)
T ss_pred HHHHHHHHh-----------------------hcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccc---ccc-h-------
Confidence 999999854 3459999999776666544433 3467654320 000 0
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHhcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQ-KDIFSAVGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~ 337 (540)
.+..+.++++. ++......+......+....+. |.+.++.|+++...
T Consensus 207 ---------------------~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~---- 254 (394)
T PRK10213 207 ---------------------QNTFRLLQRPG-------VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGL---- 254 (394)
T ss_pred ---------------------hHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHH----
Confidence 00011112221 1222222222223333333443 66666666665442
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHh
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFA 417 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (540)
........++.+++.++.+++.||.++ +.+..+..+..++.+.+.... ++.+ ......+..+++
T Consensus 255 --------g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~------~~~~-~~~~~~~l~G~~ 318 (394)
T PRK10213 255 --------TLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWG------SDKI-VATGVAIIWGLT 318 (394)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHh------hhHH-HHHHHHHHHHHH
Confidence 225555667788888999999999544 443333333333322222211 1122 222233333333
Q ss_pred hcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 046667 418 NFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497 (540)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (540)
.....+...+++.+..| +.++.+.++.....++|..+|+.+.|.+.| ..|+...+...+++.++..
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~-------------~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 319 FALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD-------------NIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------ccChhhHHHHHHHHHHHHH
Confidence 33334444456677776 446677788888889999999999999994 5677777777666655554
Q ss_pred HHH
Q 046667 498 LFT 500 (540)
Q Consensus 498 ~~~ 500 (540)
+..
T Consensus 385 ~~~ 387 (394)
T PRK10213 385 LLV 387 (394)
T ss_pred HHH
Confidence 433
No 40
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.2e-31 Score=265.56 Aligned_cols=409 Identities=13% Similarity=0.129 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
.++..+....+.....+.++..+....|.+.+ + +.++++.+++.+++.++..+++++.|+++||+|||+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~ 92 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-Q----------GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-c----------CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce
Confidence 34666677777778888888877888887764 5 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 100 VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
++..+.++.+++.+++++.++. ..+++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+.++|..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~ 170 (438)
T TIGR00712 93 FLPAGLILSAAVMLLMGFVPWA--TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIP 170 (438)
T ss_pred ehHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHH
Confidence 9999999999998888765321 01167788999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
+.+.+..... ..+||+.|++.++.+++. ++..+++||+|+.. ..++.++.++
T Consensus 171 ~~l~~~~~~~----------------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~--- 223 (438)
T TIGR00712 171 PLLVLLGMAW----------------------FNDWHAALYFPAICAIIVALFAFAMMRDTPQSC--GLPPIEEYRN--- 223 (438)
T ss_pred HHHHHHHHHH----------------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhc--CCCCchhccc---
Confidence 8877654321 235999999977776664 44456678877541 1000000000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (540)
+...+.. ++ .+.+.+..+.+.+...+. +.++......++.....++...+.|.++++ .|+++..
T Consensus 224 -----~~~~~~~--~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~----- 288 (438)
T TIGR00712 224 -----DYPDDYN--EK-AEQELTAKEIFMQYVLPN--KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK----- 288 (438)
T ss_pred -----ccccccc--cc-cccccchHHHHHHHHccC--chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh-----
Confidence 0000000 00 000001111111111111 223333334444445566777788888876 4555543
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHH-HHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMF-ALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
+........+..+++.++++++.||+++++....+......... .+.+... ...+.+.. ....+..++
T Consensus 289 -------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~g~ 357 (438)
T TIGR00712 289 -------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMN---PAGNPLVD-MICMIVIGF 357 (438)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhc---CCCchHHH-HHHHHHHHH
Confidence 22245566677888999999999999643322222222211111 1111110 00111221 122222222
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhH-HHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHH
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGA-IVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLL 495 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 495 (540)
...+..........|.+|++.|+++.|+.+..+++++ +++|.+.|.+.| ..||...+++..++.++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~-------------~~g~~~~~~~~~~~~~~ 424 (438)
T TIGR00712 358 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD-------------FFGWDGGFMVMIGGSIL 424 (438)
T ss_pred HHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH-------------hccchHHHHHHHHHHHH
Confidence 2222222222356799999999999999999988875 689999999984 55788888888777777
Q ss_pred HHHHHH-hcccCC
Q 046667 496 GLLFTF-LVPESK 507 (540)
Q Consensus 496 ~~~~~~-~~~~~~ 507 (540)
+.+..+ ..+|.|
T Consensus 425 ~~~~~~~~~~~~~ 437 (438)
T TIGR00712 425 AVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHhhcc
Confidence 776666 555544
No 41
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=3.8e-31 Score=259.02 Aligned_cols=367 Identities=15% Similarity=0.091 Sum_probs=250.0
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
+..+.++.+..........+.+|. +.+++ |.|..+.|++.+++.+++.++++++|+++||+||||+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~l----------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDL----------GFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ 86 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhc----------CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH
Confidence 333444555556666777777875 57788 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh---hccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIAS---GLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (540)
Q Consensus 104 ~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (540)
+.++..++.+.. +..+.. ...+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~ 165 (392)
T PRK12382 87 GMLACGLAGLAYLLAAILPVS-APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGA 165 (392)
T ss_pred HHHHHHHHHHHHHhhhccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHH
Confidence 988877765433 222210 0112788999999999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHH
Q 046667 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKV 260 (540)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~ 260 (540)
++++.+.. ..|||+.+.+..+..++........||.++. ++++
T Consensus 166 ~~~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------- 208 (392)
T PRK12382 166 PLGLLLHS-----------------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAH-----AGER--------- 208 (392)
T ss_pred HHHHHHHh-----------------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCC-----cccC---------
Confidence 99998853 3459988776555443333322223332211 0000
Q ss_pred HhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHH
Q 046667 261 LQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQE 340 (540)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 340 (540)
.+.++..+ ...+. ....+.....+.....+.+.++++.++...
T Consensus 209 -------------------~~~~~~~~-~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------- 251 (392)
T PRK12382 209 -------------------PSLWSVVG-LIWKP--------GLGLALQGVGFAVIGTFVSLYFASKGWAMA--------- 251 (392)
T ss_pred -------------------chHHHHHH-HHHHh--------HHHHHHHHHHHhHHHHHHHHHHHhcCCchh---------
Confidence 00000000 00000 011111222333444555666655444211
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcC
Q 046667 341 VYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420 (540)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (540)
........++.+++.++.+++.||+|+|+.+..+..+.+++..++.... +.+.. ....+..+.....
T Consensus 252 -----~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~l~g~~~~~ 318 (392)
T PRK12382 252 -----GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP-------TAWVA-LAGAALTGAGCSL 318 (392)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc-------cHHHH-HHHHHHHHHHHHh
Confidence 1123345556677888999999999999988888777777666554432 22222 2222233333333
Q ss_pred CccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
..+...+...|.+|++.||++.|+.+....+|..++|.+.+.+.+ ..||+..|.+.+++.+++.+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-------------~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 319 IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT-------------SFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCchHHHHHHHHHHHHHHHHH
Confidence 344555667788999999999999999999999999999999984 5688999999888888877766
Q ss_pred Hh
Q 046667 501 FL 502 (540)
Q Consensus 501 ~~ 502 (540)
++
T Consensus 386 ~~ 387 (392)
T PRK12382 386 IL 387 (392)
T ss_pred Hh
Confidence 63
No 42
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.2e-30 Score=249.09 Aligned_cols=391 Identities=14% Similarity=0.129 Sum_probs=273.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhh-hhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGR-IYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
+-.++.+.+..++.+........++++.+.+.+ ++ ++|.+|.+++.+++.++++++.++.|++.||+|.
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~----------~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~ 99 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGF----------NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGG 99 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334567778888888888899999999999876 78 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcc-----CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLS-----FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~ 172 (540)
|+++.++.+++++.+++.+++ ++ ++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....
T Consensus 100 R~v~~~~~ll~~i~~~~~~~a~~~~~~s------~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G 172 (462)
T PRK15034 100 RRWTVFSTAILIIPCVWLGIAVQNPNTP------FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLG 172 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCCC------HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHH
Confidence 999999999999999999986 55 79999999999998 7789999999999999999999999998777
Q ss_pred HHHHHHHHHHHHHHHH-----HhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCChhhHHHh
Q 046667 173 GFGILAGGIFALIVSS-----AFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETARYTALV 246 (540)
Q Consensus 173 ~~G~~~g~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~ 246 (540)
++|..+++++...+.. ..+.... ........+||...++.+++.++..++. ++.+|.|+.
T Consensus 173 ~~G~~l~~~l~p~~i~~~l~~~~G~~~~----------~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~---- 238 (462)
T PRK15034 173 NLGVSVMQLVAPLVIFVPVFAFLGVNGV----------PQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS---- 238 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccc----------cccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----
Confidence 8888777776665442 1111000 0000124569998888777666655544 444443321
Q ss_pred hccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Q 046667 247 AKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV 326 (540)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (540)
+.+.++ ..+.+|++ ..|...+.+++....+.+...+.|.+.++
T Consensus 239 ~~~~~~-----------------------------~~~vlk~~-------~~Wllslly~~tFG~fvg~s~~lp~~~~~- 281 (462)
T PRK15034 239 RASIAD-----------------------------QLPVLQRL-------HLWLLSLLYLATFGSFIGFSAGFAMLAKT- 281 (462)
T ss_pred ccCHHH-----------------------------HHHHhCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 000000 00111221 34555666666666677777788877665
Q ss_pred cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHH
Q 046667 327 GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGF 406 (540)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (540)
.+... ..........+...+.++++|+++||+|+|+.+.++++.+.++...+....... .....+..
T Consensus 282 ~~~~~------------~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~-~~~~~~~~ 348 (462)
T PRK15034 282 QFPDV------------NILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT-GSGNFIAF 348 (462)
T ss_pred HcChH------------HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc-cccHHHHH
Confidence 12110 011122334456677888999999999999999988877766654433222100 01112222
Q ss_pred HHHHHHHHHHhhcCCccceeeeecccCch---------------------hhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 407 VIIYSLTFFFANFGPNATTFVVPAEIFPA---------------------RLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
...+.......+.+ +...+-++.+++|+ ++.|.+.|+....+.+|+++.|.++|...+
T Consensus 349 ~~~~~~l~~~~G~g-ngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 349 YAVFMGLFLTAGLG-SGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHHHHHhccc-chHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHH
Confidence 22222222233333 34555667777774 257899999999999999999999999998
Q ss_pred ccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 466 SKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
.++ ++...|+.+.+..++|.++.+..
T Consensus 428 ~~g------------~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 428 MTG------------SPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HcC------------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 665 67888999988888888888743
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7.6e-31 Score=255.40 Aligned_cols=367 Identities=13% Similarity=0.122 Sum_probs=255.2
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
.+....+..+..+.......+.+|.+.+++ +.+.++.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDV----------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHc----------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 344556677778888888889999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+.++.+++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++++++
T Consensus 74 ~~~~~~~~~~l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 147 (382)
T PRK10091 74 LVALCVIGNAMFTLSSS------YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLG 147 (382)
T ss_pred HHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999998 799999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH-HHHhCCCChhhHHHhhccHHHHHHHHHHHHh
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY-WRMKMPETARYTALVAKNAKQAASDMSKVLQ 262 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (540)
+.+.+ ..+||+.|++.++..++..+ ..+++||.++. .+.+.++
T Consensus 148 ~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~---------- 191 (382)
T PRK10091 148 TYLSQ-----------------------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE---AKGGLRE---------- 191 (382)
T ss_pred HHHhh-----------------------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc---cccCHHH----------
Confidence 88853 34599999997776665444 34557775421 0000000
Q ss_pred hhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHH
Q 046667 263 VELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEV 341 (540)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~ 341 (540)
. .+.++++. .+......++.....+....+.+.++. ..|+++..
T Consensus 192 --------~-----------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--------- 236 (382)
T PRK10091 192 --------Q-----------FHFLRSPA-------PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS--------- 236 (382)
T ss_pred --------H-----------HHHhcChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH---------
Confidence 0 00111111 111111111222222222333344443 34555443
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGP 421 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (540)
.........++.+++.++.+++.||+++|+.+..+..+.+++.+++..... ..+.......+. +.+..+.
T Consensus 237 ---~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~-~~g~~~~ 306 (382)
T PRK10091 237 ---MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG------MKTASLIFAFIC-CAGLFAL 306 (382)
T ss_pred ---HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHH-HHHHHhh
Confidence 233566677788899999999999999999888887777766655433221 112222211111 1111111
Q ss_pred c-cceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 422 N-ATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 422 ~-~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
. +.......+..|++.++.+ ..+...++|..++|.+.|.+.|. ..+|+..+.+.++++++.....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~------------~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 307 SAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL------------GLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred hHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc------------ccCcchHHHHHHHHHHHHHHHH
Confidence 2 2222233444555555554 34677889999999999999963 3478888888777776666555
Q ss_pred H
Q 046667 501 F 501 (540)
Q Consensus 501 ~ 501 (540)
.
T Consensus 373 ~ 373 (382)
T PRK10091 373 L 373 (382)
T ss_pred H
Confidence 5
No 44
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-30 Score=237.05 Aligned_cols=393 Identities=16% Similarity=0.206 Sum_probs=300.1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc
Q 046667 16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL 95 (540)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~ 95 (540)
..++.+++.+.+..+......+....++++.+.+.+++ ++|+.|.+++.++..+..++.-++.|.+.||+
T Consensus 7 ~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~----------~LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 7 RGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDF----------GLSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----------CCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 34445667777777888888888899999999999999 99999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHH
Q 046667 96 GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 96 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
|.|++..+++++..+.++..+++..+ .+++++++++++.|++ |+.+.+...++++|+||+++|.++|+.. ..|+|
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~---~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G 151 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTY---PSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLG 151 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccC---CchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-ccccc
Confidence 99999999999999999999998874 2246999999999998 7789999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHH
Q 046667 176 ILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAA 254 (540)
Q Consensus 176 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~ 254 (540)
..+...++..+....+. ..||....+..+..++. +..++.+.|.|+. ....+..+.
T Consensus 152 ~av~q~~~P~v~~~~g~--------------------~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~--r~~~~~~~~- 208 (417)
T COG2223 152 VAVAQLVAPLVAVAFGF--------------------LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH--RASVKPQLP- 208 (417)
T ss_pred HHHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--hccccccch-
Confidence 99999998888654431 02898888877766664 4445667777653 111110000
Q ss_pred HHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCccc
Q 046667 255 SDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAK 333 (540)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 333 (540)
..++....+ +..|...+.++.....+.++..+.|.++++ .+.++...
T Consensus 209 -----------------------------~~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~A 256 (417)
T COG2223 209 -----------------------------AQLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTA 256 (417)
T ss_pred -----------------------------hHHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Confidence 000111111 245666777777777888888888988876 55555542
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHH
Q 046667 334 TMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLT 413 (540)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (540)
........+...+.++++|+++||+|.++.+...+..++++..++...................+...
T Consensus 257 ------------g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l 324 (417)
T COG2223 257 ------------GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLAL 324 (417)
T ss_pred ------------HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHH
Confidence 23555566666778899999999999999999999999998888877653221112233333333333
Q ss_pred HHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHH
Q 046667 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVN 493 (540)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (540)
..+.+.+ +...+.+++.++|+ +.|.+.|+...++.+|+..-|...+...+.++ .+...|+++..+.
T Consensus 325 ~~~~G~G-nGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg------------~~~~~f~~~~~~~ 390 (417)
T COG2223 325 FVFAGLG-NGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG------------SYTGAFMLLLAFY 390 (417)
T ss_pred HHHhccC-cchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc------------cHHHHHHHHHHHH
Confidence 3344444 45677888888876 57999999999999999999999999998655 5788999999999
Q ss_pred HHHHHHHHhcc
Q 046667 494 LLGLLFTFLVP 504 (540)
Q Consensus 494 ~~~~~~~~~~~ 504 (540)
+++.+..+...
T Consensus 391 ~~a~v~~~~~y 401 (417)
T COG2223 391 LVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHH
Confidence 88888777443
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=7.9e-31 Score=264.82 Aligned_cols=380 Identities=14% Similarity=0.120 Sum_probs=266.4
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH
Q 046667 23 TAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG 102 (540)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~ 102 (540)
+.+..+.++.+...++....++.+|.+.+++ +.+..+.+++.+.+.++..++.++.|+++||+|||++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 71 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDL----------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFL 71 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHH
Confidence 3456777888999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH
Q 046667 103 MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF 182 (540)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 182 (540)
.+.++..+++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 72 ISTFAFTLGSLLCGVAPN------LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999999988 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHH------
Q 046667 183 ALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAAS------ 255 (540)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~------ 255 (540)
++++. +..+||+.|++.++.+++..+. .++.||+++.. ..+.+......
T Consensus 146 ~~~l~-----------------------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~~l~~~~~~ 201 (485)
T TIGR00711 146 GGWII-----------------------ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA-SENFDFLGLLLLSVGLG 201 (485)
T ss_pred HhHhc-----------------------cCcCceehhhhhhHHHHHHHHHHHHHcCCccccc-cCCCcHHHHHHHHHHHH
Confidence 99884 3466999999977776655444 45566654321 11111100000
Q ss_pred HHHHH-Hh-hhch--hhHh----------------hhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046667 256 DMSKV-LQ-VELE--AEEQ----------------KIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQ 315 (540)
Q Consensus 256 ~~~~~-~~-~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (540)
..... .. .+.+ .+.. ..+..++++....+.++++ .++......+.....++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 274 (485)
T TIGR00711 202 SLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYR-------NFTIGCVYMSLLGLGLYGS 274 (485)
T ss_pred HHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCC-------ChHHHHHHHHHHHHHHHHH
Confidence 00000 00 0000 0000 0000001111111122221 2222333444445556666
Q ss_pred hhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 316 NLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 316 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
..+.|.++++ .|+++.+ +.....+..++.+++.++.+++.||++||+.+..+..+.+++...+....
T Consensus 275 ~~~~p~~~~~~~g~s~~~------------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQ------------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF 342 (485)
T ss_pred HHHHHHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC
Confidence 6778888765 4555443 23356667778888999999999999999998888877777766655322
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
. ............+..+++.....+.......+..|++.++++.|+.++...+|+.+++.+.+.+.+
T Consensus 343 ~----~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 343 T----PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred C----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111122222222222222222222334455677899999999999999999999999999999986
No 46
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=6.1e-30 Score=251.63 Aligned_cols=360 Identities=13% Similarity=0.055 Sum_probs=249.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
+++.+...+.+.+..+...++...+.+.+|.+.+++ +.+..+.++..+.+.+++.+++++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~ 77 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDF----------NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGR 77 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 455667777788888888888888999999999999 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (540)
|+++..+..+.+++.+++.++++ ++.+++.|+++|++.+...+...+++.|++|+++|.+..++......+|..
T Consensus 78 r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T PRK15402 78 RPVMLAGVAFFILTCLAILLAQS------IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPL 151 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 789999999999999988899999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHH
Q 046667 178 AGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASD 256 (540)
Q Consensus 178 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~ 256 (540)
++|.+++.+.+ ..+||+.|++.++..++..+. .+..||+++.. .++. + .++
T Consensus 152 ~g~~i~~~l~~-----------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~-~~~ 203 (406)
T PRK15402 152 LGPLVGAALIH-----------------------VLPWRGMFVLFAALAALSFFGLWRAMPETAGRV--GEKL--S-LKE 203 (406)
T ss_pred HHHHHHHHHHH-----------------------ccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc--cccc--c-HHH
Confidence 99999988754 345999999877776665443 34567765321 0000 0 000
Q ss_pred HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccch
Q 046667 257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTM 335 (540)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 335 (540)
.. + +....++++ .++......++.....+....+.|.++.+ .++++.+
T Consensus 204 ~~--------------~-------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~--- 252 (406)
T PRK15402 204 LG--------------R-------DYKLVLKNR-------RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE--- 252 (406)
T ss_pred HH--------------H-------HHHHHHcCc-------HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH---
Confidence 00 0 000111111 12222222222223333333445555433 4554332
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHH
Q 046667 336 NAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFF 415 (540)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (540)
.+. ......++.+++.++.+++.||+++|+.+..+..+..++..++...... . ...+.......+..+
T Consensus 253 --------~g~-~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~~~~~~~~~~g 320 (406)
T PRK15402 253 --------YGL-LQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI--S-SHAYLWLTAGLSLYA 320 (406)
T ss_pred --------HHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--c-cccHHHHHHHHHHHH
Confidence 121 3334445677888999999999999998888877766666555443210 0 111222222222222
Q ss_pred HhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
++.....+........ .+++.+|++.++.+....++..+++.+.+.+.+
T Consensus 321 ~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 321 FGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2222222333333323 345789999999999999999999999999875
No 47
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-30 Score=252.26 Aligned_cols=371 Identities=14% Similarity=0.194 Sum_probs=269.3
Q ss_pred CCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhh
Q 046667 60 EKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGF 139 (540)
Q Consensus 60 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 139 (540)
+..+++|..+.+++.++++.|+.+++++.|+++||+|.|+++..+.++.++++++..++.+. .++.+++.|+++|+
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~----~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI----GFYLLLVLRFLQGL 140 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh----cchhhHHHHHHhHH
Confidence 45678999999999999999999999999999999999999999999999999999988763 25688999999999
Q ss_pred ccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHH
Q 046667 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIV 219 (540)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f 219 (540)
+.|..+|+...+.++|.|++||++..++..++..+|.+++.++++++.+. ..||+.+|
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----------------------~~GW~sif 198 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----------------------SLGWPSIF 198 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------------------CCCCchHH
Confidence 99999999999999999999999999999999999999999999999632 37799999
Q ss_pred HhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHH
Q 046667 220 MVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHL 298 (540)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (540)
++.++.+++..++ .++..|+|+.. +.-.+++.+.+++-.. +.+..++.+..++++++++ .+
T Consensus 199 Y~~g~~g~i~~~~w~~~~~d~P~~h---~~is~~El~~I~~~k~--------~~~~~~~~~vP~~~i~ts~-------~v 260 (466)
T KOG2532|consen 199 YVFGIVGLIWFILWFLFYSDSPSKH---PNISEKELKYIEKGKS--------EAHVKKKPPVPYKAILTSP-------PV 260 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccC---CCCCHHHHHHHHhccc--------ccccCCCCCCCHHHHHcCH-------HH
Confidence 9988888776555 46677888642 2212222222211100 0000000122333444443 56
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc-----
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR----- 372 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~----- 372 (540)
|.+.+..++.+..++....|.|.|+++ ++++... .+....+..+...+..+++|.++||+.+
T Consensus 261 wai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------------~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~ 328 (466)
T KOG2532|consen 261 WAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------------TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSE 328 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------------hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCch
Confidence 778888888889999999999999987 5554444 3336666677778888899999999855
Q ss_pred ----hhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHH
Q 046667 373 ----FAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAS 448 (540)
Q Consensus 373 ----r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 448 (540)
|..-.++....+++++++.+... ...+..++++.+..++.+. .............+++.+..+|+.+..
T Consensus 329 t~~rkifn~i~~~~~ai~l~~l~~~~~-----~~~~~a~~~l~~~~~~~g~--~~~Gf~~~~~~~apq~a~~l~g~~~~~ 401 (466)
T KOG2532|consen 329 TTVRKIFNTIAFGGPAVFLLVLAFTSD-----EHRLLAVILLTIAIGLSGF--NISGFYKNHQDIAPQHAGFVMGIINFV 401 (466)
T ss_pred HhHHHHHHhHHHHHHHHHHHeeeecCC-----CcchHHHHHHHHHHHHccc--chhhhHhhhhhccchHHHHHHHHHHHH
Confidence 23334555555555555555442 1222333333333322222 222222222221467799999999999
Q ss_pred HHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 449 GKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 449 ~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
..+.++++|.+.+.+.+ .+ +...|+..|++.+++.+++.+++.+.
T Consensus 402 ~~~~~~~~P~~vg~~~~-~~---------t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 402 GALAGFIAPLLVGIIVT-DN---------TREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHheeeEeC-CC---------CHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999984 11 24589999999999999888666544
No 48
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=252.45 Aligned_cols=379 Identities=14% Similarity=0.146 Sum_probs=254.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
..+..++.+.++++..+++..|+..+..+.+.+++.| |++++..|++++.+.+.+.+++|+.|+++|||+
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~f----------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN 96 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYF----------NISDSELGLLQTVFIVVFMIASPLFGYLADRYN 96 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhc----------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 3445677888899999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~ 176 (540)
||+++.+|..+|++++++++++.. ||+++++|.+.|+|++...++++++++|.+|.++|++++++++.+..+|.
T Consensus 97 R~~v~~vG~~iW~~Av~~~~fs~~------Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGs 170 (493)
T KOG1330|consen 97 RKRVIAVGIFIWTLAVFASGFSNH------FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGS 170 (493)
T ss_pred cceEEeeHHHHHHHHHHHHHHHHH------HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccccc
Confidence 999999999999999999999966 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHH
Q 046667 177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
.+|.+.+..+..... .|||.|...++++++..++ .++.+|+++.. .++...+
T Consensus 171 glG~vvgs~va~~~~----------------------~Wr~af~~~avl~vi~~~L~~~f~~eP~rga--~~~~~~~--- 223 (493)
T KOG1330|consen 171 GLGYVVGSVVASLTF----------------------WWRWAFRGSAVLGVIVGLLVFLFVREPERGA--RDEVDGE--- 223 (493)
T ss_pred ceeEEeeeeeccCcc----------------------ceEEEEEeehHHHHHHHHHHHhhccCccccc--ccccccC---
Confidence 999999988864332 2999999988888876555 46677765420 0000000
Q ss_pred HHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHh-hhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccc
Q 046667 256 DMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFL-RRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKT 334 (540)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 334 (540)
.+..++..+.++.++.... +......+......+..+..-+....+.+..+.-.+...+
T Consensus 224 -----------------~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~--- 283 (493)
T KOG1330|consen 224 -----------------NKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHN--- 283 (493)
T ss_pred -----------------CcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccc---
Confidence 0000111111111111111 1111123333333333332222223333333333332222
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccch----hHHHHHHHHHHH----HHHHHHhcccccccCCchhHH
Q 046667 335 MNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRF----AIQMMGFFFMTV----FMFALAIPYDHWTHKSNRLGF 406 (540)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 406 (540)
.+.+...+...++.+|.+++|.++||+.|+ ....+..+..+. +...+..... . .....+..
T Consensus 284 ---------~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~-~-~~~s~~~~ 352 (493)
T KOG1330|consen 284 ---------ATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA-F-TSSSMIFG 352 (493)
T ss_pred ---------cchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh-h-hhHHHHHH
Confidence 245567777778888888888888884321 112221111111 1111111110 0 11122333
Q ss_pred HHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccccc
Q 046667 407 VIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKT 470 (540)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~~~ 470 (540)
++++.+........+ ....-+..|++|++.|.++.++...+..+ |.+-+|.+.|.+.|.-...
T Consensus 353 ~il~~~g~~~~~~~~-a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~ 416 (493)
T KOG1330|consen 353 LILFLVGETISWFNW-ATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGY 416 (493)
T ss_pred HHHHHHHHHHHhccc-ccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCC
Confidence 333333333333333 33445668999999999999999877765 5556666999999875543
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=7.5e-30 Score=248.48 Aligned_cols=362 Identities=15% Similarity=0.175 Sum_probs=250.2
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMT 104 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~ 104 (540)
+..+.++.++...+.....+.+|.+.+++ +.|..+.|++.+++.++..+++++.|+++||+|||+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~ 77 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQE----------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 44555777888888899999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 046667 105 LMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAL 184 (540)
Q Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 184 (540)
.++.+++.++++++++ ++.++++|+++|++.+...+...+.+.+..++++|++++++...+.++|..+|+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 78 SLIFAAGCAGLGLMVG------FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888 7999999999999999988888888889999999999999999999999999999998
Q ss_pred HHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhh
Q 046667 185 IVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVE 264 (540)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (540)
.+.... .|...+... ......+.. .+.+.+++. . +++
T Consensus 152 ~l~~~~-----------------------~~~~~~~~~-~~~~~~~~~-~~~~~~~~~--~-~~~--------------- 188 (381)
T PRK03633 152 KVSTEL-----------------------MSVLPWVTG-LVLAAILPL-LFTRILNQQ--A-ENH--------------- 188 (381)
T ss_pred cccccc-----------------------cchHHHHHH-HHHHHHHHH-HHhcccCCC--C-CCC---------------
Confidence 874321 122222211 111111111 111211110 0 000
Q ss_pred chhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHH
Q 046667 265 LEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKI 344 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (540)
+..+..+.++++.. +.. ....+.....+.....+.|.+.++.|.++.. .
T Consensus 189 -------------~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~-----------~ 237 (381)
T PRK03633 189 -------------DSTSIWPMLKLRQA----RLG---VNGCIISGIVLGSLYGLMPLYLNHQGMSDAS-----------I 237 (381)
T ss_pred -------------CCCCHHHHHHhcch----HHH---HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------H
Confidence 00011111222211 111 1111112222333445677777765554433 1
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
+ .......++.+++.+..+++.||+++|+.+..+.....++.+.+. .. ..... .....+.......|.
T Consensus 238 g-~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~---------~~~~~-~~~l~g~~~~~~~p~ 305 (381)
T PRK03633 238 G-FWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ---------AAMAP-ALFILGAAGFTLYPV 305 (381)
T ss_pred H-HHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh---------HHHHH-HHHHHHHHHHhHHHH
Confidence 2 244556667788889999999999999988877776666554332 11 11111 111222223334566
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
..+.+.|..|++.++.+.+..+...++|..++|.+.|.+.| ..+++..|.+.+.+.++..+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~-------------~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 306 AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ-------------NYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCccHHHHHHHHHHHHHHHHHH
Confidence 77777898988888888888888899999999999999985 45677888887777776654444
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.1e-30 Score=249.24 Aligned_cols=349 Identities=11% Similarity=0.001 Sum_probs=249.1
Q ss_pred HHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHH
Q 046667 29 GMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLM 108 (540)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~ 108 (540)
.++.++..+......+.+|.+..++ +.+..+.+++.+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAG----------TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 3556666677777788888888888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC-----CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 109 VICSIASGLSF-----GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 109 ~i~~~~~~~~~-----~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+++.++.+++. + ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 148 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN------IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIG 148 (365)
T ss_pred HHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 88888887776 5 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhC--CCChhhHHHhhccHHHHHHHHHHHH
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKM--PETARYTALVAKNAKQAASDMSKVL 261 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~--~esp~~~~~~~~~~~~~~~~~~~~~ 261 (540)
+.+.+.. +||+.|++.++..++..+..+.+ ||+++. .+++.++ +..
T Consensus 149 ~~l~~~~-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~---- 196 (365)
T TIGR00900 149 GLMYATL-----------------------GIKWAIWVDAVGFAISALLIVSVRIPELAAS---EIQALSN--AVL---- 196 (365)
T ss_pred HHHHHHh-----------------------hHHHHHHHHHHHHHHHHHHHHhcccccCCCc---cccccch--hHH----
Confidence 9986544 49999998777666554444333 332221 0000000 000
Q ss_pred hhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHH-hcCCCcccchhhHH
Q 046667 262 QVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQN-LFQKDIFSA-VGWIPSAKTMNAIQ 339 (540)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~ 339 (540)
++..+ .....++++ .++......+.....+.... .+.|.+.++ .++++.+
T Consensus 197 --------~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 248 (365)
T TIGR00900 197 --------RDTRE------GIKFVLKNP-------LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTH------- 248 (365)
T ss_pred --------HHHHh------HHHHHHcCc-------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHH-------
Confidence 00000 000111111 11222222222223333333 455666654 4544333
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhc
Q 046667 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANF 419 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (540)
.........++.+++.++.+++.||.+||+.+..+..+.+++...+.... .+.....+..+..+++..
T Consensus 249 -----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~ 316 (365)
T TIGR00900 249 -----YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP-------PNFPLFLVLWFAIGVGYG 316 (365)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc-------hhHHHHHHHHHHHHHHHH
Confidence 22255556677788889999999999999988877666666665554432 112223333334444444
Q ss_pred CCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 420 GPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 420 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
...+...++..|..|++.|+++.|+.+...+++..++|.+.|.+.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 317 PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888999999999999999999999999999999999986
No 51
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1.3e-29 Score=245.00 Aligned_cols=346 Identities=23% Similarity=0.343 Sum_probs=280.3
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLM 106 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~ 106 (540)
.+.+..+...++.....+..|.+.+++ +.+..+.+++.+...++..+++++.|+++||+|||+.+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~ 72 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL----------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLL 72 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHH
Confidence 345567778888888899999999888 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 107 LMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
+..++.+++.+.++ ++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+
T Consensus 73 ~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (352)
T cd06174 73 LFALGSLLLAFASS------LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL 146 (352)
T ss_pred HHHHHHHHHHHhcc------HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 799999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhch
Q 046667 187 SSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELE 266 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (540)
.+..+ ||+.+++.++..++..+...+++ |
T Consensus 147 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~--~-------------------------- 175 (352)
T cd06174 147 AESLG-----------------------WRWLFLILAILGLLLALLLLFLL--R-------------------------- 175 (352)
T ss_pred HHHhh-----------------------HHHHHHHHHHHHHHHHHHHHHHH--H--------------------------
Confidence 65433 99999998777766655543332 0
Q ss_pred hhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cCCCcccchhhHHHHHHHH
Q 046667 267 AEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV-GWIPSAKTMNAIQEVYKIA 345 (540)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 345 (540)
.++......+...........+.+.+..+. ++++.+ .
T Consensus 176 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 213 (352)
T cd06174 176 ------------------------------LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE------------A 213 (352)
T ss_pred ------------------------------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH------------H
Confidence 122333444444455666666777776663 443332 2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 346 RAQTLIALCSTVPGYWFTVAFIDKIGRFA-IQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~d~~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
........++.+++.++.+++.||++||+ .+..+..+..++.+.+.... + ........+..+.......+.
T Consensus 214 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~-~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 214 GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP-------S-LALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-------c-HHHHHHHHHHHHHHHhccchh
Confidence 33566677788889999999999999999 88888888887777666543 1 333344444455555556678
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
..++..|..|+++|++..|+.+...+++..+++.+.+.+.+ ..+++..+.+.+++.+++.+..++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-------------~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-------------TGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------ccCcchHHHHHHHHHHHHHHHhee
Confidence 88899999999999999999999999999999999999984 568889999998888887776553
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=2.8e-29 Score=247.68 Aligned_cols=373 Identities=15% Similarity=0.126 Sum_probs=254.8
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhh-----hhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNV-----SAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY 101 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~ 101 (540)
...++.++..+......+.+|.+.+++ +.+..+ .|++.+++.++..+++++.|+++||+|||+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQL----------GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHh----------CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 345566777777778888999988888 666543 58999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (540)
..+.++.+++.+++.+.++ ++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN------IWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888877 7999999999999854 56888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHH
Q 046667 182 FALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKV 260 (540)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~ 260 (540)
+++.+.+. .+||+.|++.++..++..+. .+++||+++. .++++..+ .
T Consensus 161 ~~~~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~------ 208 (408)
T PRK09874 161 AGGLLADS-----------------------YGLRPVFFITASVLFLCFLVTLFCIRENFQP--VSKKEMLH-M------ 208 (408)
T ss_pred HHHHHHHH-----------------------hCHHHHHHHHHHHHHHHHHHHHHHhccCccc--ccchhhhH-H------
Confidence 99988643 34999999977766655443 4556665422 00000000 0
Q ss_pred HhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHH
Q 046667 261 LQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQE 340 (540)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 340 (540)
++ ..+.++++.. .+......+...........+.+.+..+.+.....
T Consensus 209 ------------~~-------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 255 (408)
T PRK09874 209 ------------RE-------VVTSLKNPKL------VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSN-------- 255 (408)
T ss_pred ------------HH-------HHHhCcCCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH--------
Confidence 00 0000111110 11111111111112222223344444442221111
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcC
Q 046667 341 VYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420 (540)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (540)
.............++.+++.+..+++.||++||+.+..+..+..++.+.+.... +.+ ...+..+..+++...
T Consensus 256 ~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~~~~ 327 (408)
T PRK09874 256 IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ-------TPL-QLGILRFLLGAADGA 327 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc-------cHH-HHHHHHHHHHhhhHh
Confidence 001122233444566677788899999999999998887776665555444322 122 222233333333333
Q ss_pred CccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
..+...+...+..|++.+|+.+++.+....+|..++|.+.|.+. +..||+..|++.+++.+++.+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~-------------~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 328 LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS-------------ANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHH-------------hhcchhHHHHHHHHHHHHHHHHH
Confidence 44555566678888899999999999999999999999999998 46688999999998888887776
Q ss_pred Hh
Q 046667 501 FL 502 (540)
Q Consensus 501 ~~ 502 (540)
++
T Consensus 395 ~~ 396 (408)
T PRK09874 395 WN 396 (408)
T ss_pred HH
Confidence 64
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.98 E-value=4.8e-29 Score=244.21 Aligned_cols=349 Identities=16% Similarity=0.162 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 26 IVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
..+.+..+..........+..|.+.+++ +.++.+.+++.+++.++..+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 77 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADL----------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGL 77 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH
Confidence 3333444556677778888999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 046667 106 MLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALI 185 (540)
Q Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 185 (540)
++.+++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.
T Consensus 78 ~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 78 FIFALSSLGLALSNN------IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHHHHHHcc------HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888 79999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhh
Q 046667 186 VSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVE 264 (540)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (540)
+.+. .+||+.|++.++..++..+. .++.||+++.. ++++.++..+
T Consensus 152 l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------- 197 (385)
T TIGR00710 152 ILVW-----------------------LSWHAIFAFLSLAGILLSALIFFILPETLPYE--ARIQISTYFE--------- 197 (385)
T ss_pred HHHH-----------------------cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc--ccCCHHHHHH---------
Confidence 8643 34999999877766654443 45567765421 1000000000
Q ss_pred chhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHH
Q 046667 265 LEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYK 343 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 343 (540)
...+.++++. ++...+........++....+.|.++. ..++++..
T Consensus 198 ----------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------- 243 (385)
T TIGR00710 198 ----------------TFLLLLKSKM-------FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV----------- 243 (385)
T ss_pred ----------------HHHHHHcCch-------hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH-----------
Confidence 0001111111 111222222222334444455565554 34554433
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcc
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNA 423 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (540)
.........++.+++.++.+++.||+++|+.+..+..+..++.+++...... ...............+++.....+
T Consensus 244 -~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~ 319 (385)
T TIGR00710 244 -FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL---GLGSWAMIIGPMMFVGIGNSMISS 319 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHH
Confidence 2224555667788899999999999999998888777666665554433210 001122222222333333333345
Q ss_pred ceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 046667 424 TTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYL 463 (540)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~ 463 (540)
.......|..| +.++++.++.+...+.++.+.+.+.+.+
T Consensus 320 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 320 IAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55666778776 5689999999998887666666666644
No 54
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.98 E-value=5.8e-31 Score=257.25 Aligned_cols=367 Identities=14% Similarity=0.162 Sum_probs=245.4
Q ss_pred HHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHH
Q 046667 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMV 109 (540)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~ 109 (540)
++++...+++..++...|.+.+++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 71 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEI----------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCA 71 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHh----------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHH
Confidence 346777889999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 046667 110 ICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG-IFALIVSS 188 (540)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~ 188 (540)
++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++ .++..+..
T Consensus 72 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 72 IVNLFFGFSTS------LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHhhh------HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 99999999988 799999999999999999999999999999999999999999999999999999 45555532
Q ss_pred HhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchh
Q 046667 189 AFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEA 267 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (540)
..+||+.|++.++..++. ++..++.||+|+.... ++.++... ++.+.
T Consensus 146 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~ 193 (379)
T TIGR00881 146 -----------------------LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGL--PPAEEMPN-------EEPDG 193 (379)
T ss_pred -----------------------cCCchhHHHHHHHHHHHHHHHHheeeCCCcccccc--CccccCcc-------ccccc
Confidence 346999999877666554 4445567776653111 00000000 00000
Q ss_pred hHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHH
Q 046667 268 EEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIAR 346 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 346 (540)
+. ++ .+++.+..+...+...+. +.++......+...........+.|.++.+ .++++.+ ..
T Consensus 194 ~~---~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~~ 255 (379)
T TIGR00881 194 DA---EK-KEEELTKKQIFLQYVLLN--KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------------AS 255 (379)
T ss_pred cc---cc-ccccccchHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------------HH
Confidence 00 00 000000111111111111 123333344444444555566677777654 4554433 22
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcccee
Q 046667 347 AQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTF 426 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (540)
.......++.+++.++.+++.||..+|+...............+..... .............+..+....+..+...
T Consensus 256 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 332 (379)
T TIGR00881 256 WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL---NPAANPLMDLICLFALGFLVYGPQMLIG 332 (379)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc---CcchhHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3555666788889999999999864332222221111111111111110 0001122222222333333333444555
Q ss_pred eeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 427 VVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
.+..|.+|++.|+++.|+.+....+|+.++|.+.|.+.|
T Consensus 333 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 333 VIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 678899999999999999999999999999999999995
No 55
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=1.2e-29 Score=249.45 Aligned_cols=365 Identities=19% Similarity=0.268 Sum_probs=242.4
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHH-----HHHHHHHhhhhhhhhhhhcchhHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGV-----AFCGTLAGQLFFGWLGDKLGRKKVYGMTLM 106 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~-----~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~ 106 (540)
.+.+++|+..++...+.+.++++. +.++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~ 73 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFP--------PSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLL 73 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcC--------CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHH
Confidence 356788999999999999888732 2445555554443 334445789999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchh--hHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 046667 107 LMVICSIASGLSFGNSPKGV--MATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAL 184 (540)
Q Consensus 107 ~~~i~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 184 (540)
+..++.+++++++++..... ...++++|+++|++.+...+...+++.|++|+++|++..++...+..+|.++++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 74 MMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988311000 1258899999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhh
Q 046667 185 IVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVE 264 (540)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (540)
.+....+.. ..+..+||+.|++.++..++..+.....||+|++...+++ +
T Consensus 154 ~~~~~~~~~---------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------- 203 (394)
T TIGR00883 154 LLSYLLGDD---------------ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK--H------------- 203 (394)
T ss_pred HHHHhcCHH---------------HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc--c-------------
Confidence 775432210 0135689999998777766665555667777653110000 0
Q ss_pred chhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHH
Q 046667 265 LEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYK 343 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 343 (540)
++.+.+..+.++++ .+.++......+.....++....+.|.+++ +.+.++..
T Consensus 204 -----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------- 256 (394)
T TIGR00883 204 -----------KKKRGPIRETLTKH-----RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS----------- 256 (394)
T ss_pred -----------ccccCCHHHHHHhc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH-----------
Confidence 00000111111211 112333334444444556666677787774 34554433
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHH-HHHHhcccccccCCchhHHHHHHHHHHHHhhcCCc
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFM-FALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPN 422 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (540)
.........++.+++.++.+++.||+|||+.+.....+..+.. ..+..... . ..........+..++......
T Consensus 257 -~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~g~~~~~~~ 330 (394)
T TIGR00883 257 -ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD----S-GSFTLFFFLVLGLALIGGMYT 330 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc----C-CchHHHHHHHHHHHHHHHHHh
Confidence 2224555666778888899999999999998765544443332 12211110 0 112222222233333333344
Q ss_pred cceeeeecccCchhhhhhhhHHH-HHHHHHhHHHHHHHHHHHhhcc
Q 046667 423 ATTFVVPAEIFPARLRSTCHGIS-AASGKLGAIVGAFGFLYLAQSK 467 (540)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~i~~~i~~~~~~~~ 467 (540)
+...++..|.+|++.|+++.++. +....+|..++|.+.|.+.+..
T Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 56778889999999999999985 4455678889999999999643
No 56
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.98 E-value=5.9e-29 Score=243.72 Aligned_cols=362 Identities=12% Similarity=0.049 Sum_probs=236.3
Q ss_pred HHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhh---cc-
Q 046667 43 SLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASG---LS- 118 (540)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~---~~- 118 (540)
...++.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+..+++++++++. +.
T Consensus 33 ~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~ 102 (402)
T TIGR00897 33 QGWLSPFLKAL----------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGH 102 (402)
T ss_pred HHhHHHHHHHh----------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34455566778 89999999999999999999999999999999999999999999998877653 32
Q ss_pred CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccCCC
Q 046667 119 FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI-LAGGIFALIVSSAFNAAFKAP 197 (540)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~~~~~~~~ 197 (540)
++ ++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. .+++++++.+.+
T Consensus 103 ~~------~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~--------- 167 (402)
T TIGR00897 103 AN------YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP--------- 167 (402)
T ss_pred cc------HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------
Confidence 34 68888999999999888888888899999999999999999999999997 578888877742
Q ss_pred CCCCCCccccCCCCCcchHHHHHhhhHHHHHHH-HHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhh
Q 046667 198 AYEDDPIASTAPQADYLWRIIVMVGALPAALTY-YWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELD 276 (540)
Q Consensus 198 ~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (540)
..||+..++......++.. +..++.+|.++. .++++ +++.+ +..+
T Consensus 168 --------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~---------------~~~~-- 213 (402)
T TIGR00897 168 --------------AFGEMNTLWSALAFVLTGGVIALFSNKDIFTP--QHMQT-REKFS---------------ELGK-- 213 (402)
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHHHhccCCCCCc--ccccC-Ccchh---------------hHHH--
Confidence 3445544444332222222 223334443221 00000 00000 0000
Q ss_pred cccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhh
Q 046667 277 RDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
.....++++ .++......++....+++...+.|.+.++.|+++.+. ........++.
T Consensus 214 ----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~------------~~~~~~~~~~~ 270 (402)
T TIGR00897 214 ----AATILFTNP-------NVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEW------------LQIWGTFFFTN 270 (402)
T ss_pred ----HHHHHHcCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHH------------HHHHHHHHHHH
Confidence 000111111 2333334444555667777788898888777665442 22444556778
Q ss_pred hhhHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCch
Q 046667 357 VPGYWFTVAFIDKIGRFAIQM-MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435 (540)
Q Consensus 357 ~~~~~~~~~l~d~~g~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (540)
+++.++.|+++||++||+.+. .+....+++...+....... ..+.+. .....+..+.......+. .....|..|
T Consensus 271 ~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~~~~-~~~~~~~~G~~~~~~~~~-~~~~~~~~~- 345 (402)
T TIGR00897 271 IVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF--GHSFAV-ALIIAIALGIFLAGYVPL-AAVFPTLAP- 345 (402)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc--CCcHHH-HHHHHHHHHHHHHHHHHH-HHHHHhhCc-
Confidence 889999999999999888754 22333333322222111000 011222 222222222222222333 344566654
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 436 RLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 436 ~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
+.|+++.|+.+...++++.++|.+.+.+.+ ..|+...+++.+++.+++.+...+++
T Consensus 346 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~-------------~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 346 KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG-------------FFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------hcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999994 56788889988888888777766543
No 57
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.4e-30 Score=250.00 Aligned_cols=391 Identities=14% Similarity=0.121 Sum_probs=254.1
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHH-HhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVT-KLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
.++++..++..++....+...++... ..+.+|. +....+.+.+.++++++++++.+++|.+.||++..+
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl----------~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~ 112 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDL----------KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK 112 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCcccc----------chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH
Confidence 34455556666677777765443332 2233444 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 100 VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
.+....+++++.+++.....| ++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|
T Consensus 113 ~l~~~~~~w~~~~~~~~~~~s------~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~g 186 (495)
T KOG2533|consen 113 GLSVSGILWGLFGFLTAAVHS------FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFG 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHH
Confidence 999999999999988888887 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHH-HHHHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTY-YWRMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
.+++..+....+. ....||||.|++.++++++.. +..+++|+.|......+ ++|..-..+
T Consensus 187 gliA~g~~~~~~~-----------------~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~--~~ek~~~~~ 247 (495)
T KOG2533|consen 187 GLIAYGVFKLNGS-----------------GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT--DEEKELVVE 247 (495)
T ss_pred HHHHHHhhhhcCC-----------------CCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccc--hHHHHHHHH
Confidence 9999987653332 356789999999887777654 55678999987310111 111100000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (540)
+....+.... +++.+.....+.++++ .++...+.+++.....++...|+|.++.+ .+++..+.+.
T Consensus 248 ~~~~~~~~~~-----~~~~~~~~~~~a~~dp-------~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~-- 313 (495)
T KOG2533|consen 248 RLRESPSGGI-----ENKFKWKGFKEALKDP-------GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL-- 313 (495)
T ss_pred HHHhccCCCc-----ccccCHHHHHHHHhch-------hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc--
Confidence 0000000000 0000111112222222 46677788888888889999999999888 4465554333
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh----ccchhHHHHHHHHHHHHH-HHHHhcccccccCCchhHHHHHHHH
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDK----IGRFAIQMMGFFFMTVFM-FALAIPYDHWTHKSNRLGFVIIYSL 412 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~----~g~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (540)
+.++..++++++.+++|+++|| ..+|........+..... +.+.... .........+
T Consensus 314 ----------ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~--------~~~~~~~~~~ 375 (495)
T KOG2533|consen 314 ----------LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAA--------VLPGAYGAFL 375 (495)
T ss_pred ----------ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc--------cchHHhHHHH
Confidence 7888889999999999999999 455555554444444333 2222221 0111112122
Q ss_pred HHHHhhcCCccceeeeecccCchhh-hhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHH
Q 046667 413 TFFFANFGPNATTFVVPAEIFPARL-RSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLG 490 (540)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 490 (540)
.+........++......+....+. +-+..++.......+++++|.+..... .+.+++...|....
T Consensus 376 ~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~------------ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 376 IGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLD------------APRYGWGAVFYMLV 442 (495)
T ss_pred hcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhccccc------------CcchhhhhHHHHHH
Confidence 2222222222344444455544433 444444444445555555555543332 14457777774333
No 58
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=7.5e-29 Score=241.85 Aligned_cols=365 Identities=13% Similarity=0.057 Sum_probs=245.1
Q ss_pred HHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH-HHHHH
Q 046667 30 MGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG-MTLML 107 (540)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~-~~~~~ 107 (540)
+.++..++......+.+|. +.+++ +.|..+.|++.+++.++..+.+++.|+++||+||||.++ .+.++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 73 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEV----------RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLL 73 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHccc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 3466677777777888876 56778 899999999999999999999999999999999988755 46666
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhH--HHHHHHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF--IAAVFAMQGFGILAGGIFALI 185 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~ 185 (540)
.+++.++++++++ ++.+++.|++.|.+.+...|...+++.|+.|+++|++. .+....+.++|.++++.+++.
T Consensus 74 ~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~ 147 (375)
T TIGR00899 74 AALACLLFAWNRN------YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFW 147 (375)
T ss_pred HHHHHHHHHhcch------HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHH
Confidence 6777888888888 68888999999988888888889999999988777654 577888889999999999998
Q ss_pred HHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhh
Q 046667 186 VSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVE 264 (540)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (540)
+.+ ..+||+.|++.++..++..+. .+++||+|++. .+++.+
T Consensus 148 l~~-----------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------- 189 (375)
T TIGR00899 148 LAL-----------------------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA--PGALTR------------- 189 (375)
T ss_pred HHH-----------------------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCc--ccccCc-------------
Confidence 854 345999999988776665444 45588876531 100000
Q ss_pred chhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHH
Q 046667 265 LEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYK 343 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 343 (540)
.+..+.++++.. +...... +...........+.|.++. +.|.++.+
T Consensus 190 ---------------~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------- 236 (375)
T TIGR00899 190 ---------------LEVRGLLASRDT----RLLFVAC---TLMWGCNILYIINMPLLIIHELGLPDKL----------- 236 (375)
T ss_pred ---------------chhhhhhcCcch----HHHHHHH---HHHHHHHHHHHhhhHHHHHHHcCCCHHH-----------
Confidence 000001111111 1111111 1111112222334455543 34554433
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcc
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNA 423 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (540)
.+. .........+++.++.+++.||++||+.+..+.++..+....+.... +.+. .....+..++......+
T Consensus 237 ~g~-~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~g~~~g~~~~ 307 (375)
T TIGR00899 237 AGL-MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN-------SLWA-LLMLQLLNAIFIGILAG 307 (375)
T ss_pred HHH-HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHH
Confidence 111 23333445566778899999999999988776665444443332221 1222 22222222222222334
Q ss_pred ceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 424 TTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
....+..|..|++ ++++.++.+...++|..++|.+.|.+.+ ..|++..|++.+++.+++.+...++
T Consensus 308 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 308 IGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAE-------------RWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccchhHHHHHHHHHHHHHHHHhee
Confidence 5556778888765 6799999999999999999999999984 5578888988888888877776655
Q ss_pred c
Q 046667 504 P 504 (540)
Q Consensus 504 ~ 504 (540)
+
T Consensus 374 ~ 374 (375)
T TIGR00899 374 K 374 (375)
T ss_pred c
Confidence 4
No 59
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=7e-30 Score=246.95 Aligned_cols=347 Identities=20% Similarity=0.264 Sum_probs=244.8
Q ss_pred HHHHHHHHHhHhHHHHHHH-hhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHH
Q 046667 29 GMGFFTDAYDLFCISLVTK-LLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLML 107 (540)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~ 107 (540)
+++.+...++.....+..| .+.+++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~ 71 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEEL----------GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCS----------TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhh
Confidence 4567777888888899999 888888 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
.+++.++..++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|.++++.+++.+.
T Consensus 72 ~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 72 FALGSLLLAFASN------FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHhhhhhh------HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 9999777776666 5799999999999999999999999999999999999999999999999999999999884
Q ss_pred HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhch
Q 046667 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELE 266 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (540)
+..+||+.|++.++..++..++ .++++++|+.....++++++
T Consensus 146 -----------------------~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------- 188 (352)
T PF07690_consen 146 -----------------------SYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------- 188 (352)
T ss_dssp -----------------------CHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------
T ss_pred -----------------------hccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------------
Confidence 3455999999988888776554 34555554431111111000
Q ss_pred hhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHhcCC-CcccchhhHHHHHHH
Q 046667 267 AEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDI-FSAVGWI-PSAKTMNAIQEVYKI 344 (540)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~ 344 (540)
++.++ +..+.++....++. ++......+.....++....+.|.+ .+..+++ ..+
T Consensus 189 ------~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------ 244 (352)
T PF07690_consen 189 ------SKKPK---PLKPGFKSLFKNPV---LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------------ 244 (352)
T ss_dssp --------HHH---CCCH-CTHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------------
T ss_pred ------ccccc---ccccccccccccch---hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------------
Confidence 00000 00001111111111 1122222333333455566677766 3445554 122
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
.........+..+++.++.+++.||+++|+..........+....+...... ..........+..+++.....+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~ 319 (352)
T PF07690_consen 245 AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS-----SSPVWLIIALFLIGFGFGIVFPI 319 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH-----CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 2334556666677778899999999999887777766666666555544321 11222222333333344444677
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
...+..|..|++.+|++.|+.+...++++.++|
T Consensus 320 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 320 LFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 888999999999999999999999999999987
No 60
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=2.4e-28 Score=239.99 Aligned_cols=342 Identities=14% Similarity=0.091 Sum_probs=237.4
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVIC 111 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~ 111 (540)
.....+....+.+..|.+.+++ +.++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADL----------QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHH----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 4444456677788889999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 112 SIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
.++++++++ ++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..+++.+++.+.+
T Consensus 85 ~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~--- 155 (401)
T PRK11043 85 SLGMLWVES------AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN--- 155 (401)
T ss_pred HHHHHHhcC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 999999888 79999999999999888888888999999999999999999988899999999999998853
Q ss_pred hccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhh
Q 046667 192 AAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQK 271 (540)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (540)
..+||+.|++.++..++..+..++++|+++. .+ +++..+
T Consensus 156 --------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~---------------- 194 (401)
T PRK11043 156 --------------------HFGWQAIFATLFAITLLLILPTLRLKPSKKA--RK---QSQDAL---------------- 194 (401)
T ss_pred --------------------cCChHHHHHHHHHHHHHHHHHHHHcCCCCCc--cc---cchHHH----------------
Confidence 3459999998877777665555556654431 00 000000
Q ss_pred hhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHH
Q 046667 272 IQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLI 351 (540)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (540)
+.++.++++.. +............++....+.|.+.++.|+++...+ .....
T Consensus 195 ---------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g------------~~~~~ 246 (401)
T PRK11043 195 ---------TFKQLLKSKTY-------LGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIG------------LSYVP 246 (401)
T ss_pred ---------HHHHHHcChhH-------HHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHH------------HHHHH
Confidence 00111122211 111112222223344455567777776666544322 23444
Q ss_pred HHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecc
Q 046667 352 ALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAE 431 (540)
Q Consensus 352 ~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (540)
..++.+++.++.+++.||+++|+.........+++...+...... .... ...........++......+.......|
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--SHPS-LVPLLIPFCVMAAANGAIYPIVVAQALR 323 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--ccCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 556677788889999999999887655554444443332221100 0111 2222222222333333344555555566
Q ss_pred cCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 432 IFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 432 ~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
..| +.+|++.|+.+..+..++..++.+.+.+.+
T Consensus 324 ~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 324 PFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred hCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 666 569999999999999999999999998874
No 61
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=5.8e-29 Score=252.21 Aligned_cols=382 Identities=24% Similarity=0.323 Sum_probs=270.3
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
..+.....+..+++++|.++|++++|+++||+|||+++++++++..++.++.++++| ++.+++.|++.|++.++
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~------~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN------YWMFLIFRFLSGFFGSG 187 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhccc
Confidence 345667788999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
...+...++.|++++++|+.+..+ ......+..+++..++++.. +||+.+++..
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------------------------~Wr~~~~~~~ 241 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------------------------DWRWLFWIIS 241 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------------------------hHHHHHHHHH
Confidence 999999999999999999999999 66677777777777777642 4999999999
Q ss_pred HHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhh---ch--hhHhhh---hhhh----cccCCccchhhHHHh
Q 046667 224 LPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVE---LE--AEEQKI---QELD----RDKGNGYGLFSKEFL 291 (540)
Q Consensus 224 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~---~~~~----~~~~~~~~~~~~~~~ 291 (540)
++.++.++.+++.||+|+|+ ..+++.+++.+..++..+.+ .+ ...... +... +.+....+.++.+..
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl-~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWL-LSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRL 320 (521)
T ss_pred HHHHHHHHHHHccCcChHHH-HHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHH
Confidence 99888777777777999997 34444455555555543321 11 111110 1101 111233455555543
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcc
Q 046667 292 RRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIG 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g 371 (540)
++ ..+...+.++.....+++.......+ |-. .. ...........++....+...|++|
T Consensus 321 ~~---~~~~~~~~~~~~~~~y~gl~~~~~~l----g~~-------~~--------~~~~~~~~~~~p~~~~~~~~~~~~g 378 (521)
T KOG0255|consen 321 RY---RTLYLLFIWFVFSLVYYGLSLNVSGL----GGN-------IY--------LNFTLSGLVELPAYFRNGLLLPEFG 378 (521)
T ss_pred HH---HHHHHHHHHHHHhHHHHhhhhhhhhc----Cch-------HH--------HHHHHHHHHHhhHHHHHHHHHHHhC
Confidence 33 45555666666667777765444321 110 00 1222233366677777789999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH
Q 046667 372 RFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL 451 (540)
Q Consensus 372 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 451 (540)
||.....+..+..++++...+..... ..+...++..+..++...+.. ..+.+..|++|+..|..+.+..+....+
T Consensus 379 R~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~ 453 (521)
T KOG0255|consen 379 RRPPLFLSLFLAGIGLLLFGWLPDDL----GGWLHWILPLLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARL 453 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888766311 111233333333333344343 4478899999999999999999999999
Q ss_pred hHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH-HhcccCCCCChhhhccccc
Q 046667 452 GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT-FLVPESKGKSLEEMSGENQ 519 (540)
Q Consensus 452 g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 519 (540)
+.+++|.+...... ......+.+++.+..+..++. .++||++++...+..++.+
T Consensus 454 ~~i~ap~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 454 GSILAPLFPLLLRQ--------------MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHhh--------------hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 99999998865542 111222233455666666555 5899999988765544433
No 62
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=3.4e-28 Score=236.95 Aligned_cols=368 Identities=11% Similarity=0.031 Sum_probs=238.3
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHH
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLML 107 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~ 107 (540)
..++.++..+.........+.+.+++ +.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKEL----------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 34555555554444455556667777 78889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
.++++++++++.+ . ++.|+++|++.+...|+..+++.|++|+++|+++.++.+....+|.++||.+++++.
T Consensus 78 ~~~~~~~~~~~~~------~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 78 KLLGCLLMLFGIH------P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877654 2 788999999999999999999999999999999999999999999999999999986
Q ss_pred HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchh
Q 046667 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEA 267 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (540)
+. .|+..+.+.+...++..+..+.+||+|++. ++++. +......+..
T Consensus 149 ~~------------------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~~-~~~~~~~~~~------ 195 (393)
T PRK11195 149 DP------------------------HAEAALAVCALIYLLAALFNLFIPRLGARR--PGQSW-NPIALLRDFF------ 195 (393)
T ss_pred HH------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccCC-CHHHHHHHHH------
Confidence 42 277777766555555555556788876431 11110 0000000000
Q ss_pred hHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHH
Q 046667 268 EEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIAR 346 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 346 (540)
+. ....++++..+. .++...+.+.. ........+.+.++ .|.++.+ ..
T Consensus 196 -----~~-------~~~l~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~lg~s~~~------------~G 244 (393)
T PRK11195 196 -----HA-------CRVLWRDKLGRF---SLAGTTLFWGA----GATLRFLVLAWAPVALGITLNQ------------PA 244 (393)
T ss_pred -----HH-------HHHHHhCchhHH---HHHHHHHHHHH----HHHHHHHHHHHHHHHcCCChhH------------HH
Confidence 00 001112222111 11111111222 12222222333332 3444433 23
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcccee
Q 046667 347 AQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTF 426 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (540)
.......++.+++.++.+++.||.++|+.+..+.. .++....+.... +.+ ......+..+++.....+...
T Consensus 245 ~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~-------~~~-~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 245 YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH-------SLL-PAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh-------HHH-HHHHHHHHHHHhhhhhhhhHH
Confidence 36667778888999999999999988877766643 333332222211 122 222222222332222233455
Q ss_pred eeecccCchhh-hhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 427 VVPAEIFPARL-RSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 427 ~~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
+...+..|++. +|++.++.+...+++..++..+.+.+. ..|.+..+++.+...+++..+.+
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV--------------KLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH--------------HcCCCHHHHHHHHHHHHHHHHHH
Confidence 66677766655 799999999999999999999998774 34556666665555555555544
No 63
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=3.7e-28 Score=238.10 Aligned_cols=354 Identities=14% Similarity=0.062 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
....+.+..+...++.....+.+|.+.+++ +.+..+.++..+++.++++++++++|+++||+|||++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~----------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 86 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDF----------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLIT 86 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHH
Confidence 334445566777788888999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+.+++++++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|++++++......+|..+|++++
T Consensus 87 ~~~~~~~~~~~~~~a~~------~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 87 GALIFTLACAATLFTTS------MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred HHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 799999999999998877777888999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHh
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQ 262 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (540)
+.+.+. .|||+.|++.++..++..+. .+++||+++. ++++. +....
T Consensus 161 ~~l~~~-----------------------~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~-~~~~~------ 207 (413)
T PRK15403 161 AALMHF-----------------------VHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPF-SAKSV------ 207 (413)
T ss_pred HHHHHh-----------------------cCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCC-ChHHH------
Confidence 888543 45999999988777765554 4567886532 00000 00000
Q ss_pred hhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-cCCCcccchhhHHHH
Q 046667 263 VELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV-GWIPSAKTMNAIQEV 341 (540)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 341 (540)
.+ .....++++ .++.......+....++....+.|.++++. |+++...+
T Consensus 208 ---------~~-------~~~~ll~~~-------~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~g------- 257 (413)
T PRK15403 208 ---------LR-------DFRNVFRNR-------LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFA------- 257 (413)
T ss_pred ---------HH-------HHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHH-------
Confidence 00 001111222 223233333334444555556667776653 55444322
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGP 421 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (540)
........+.+++..+.+.+.++..+++.......+..++..++....... ...+....+..+..+.+....
T Consensus 258 -----l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~---~~~~~~~~~~~~l~~~G~~~~ 329 (413)
T PRK15403 258 -----WTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW---PHVWLWSVLGTSLYAFGIGLI 329 (413)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc---cccHHHHHHHHHHHHHHHHHH
Confidence 133444455566666666665444443333222222222222222111000 112211122222222222222
Q ss_pred ccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 422 NATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
.|......-+. ....+|++.++.+.....+..+++...+++.+
T Consensus 330 ~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~ 372 (413)
T PRK15403 330 FPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWF 372 (413)
T ss_pred hHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333211111 12237999999999999999999999998874
No 64
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.1e-28 Score=238.81 Aligned_cols=393 Identities=9% Similarity=-0.002 Sum_probs=254.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+.....+..+.+..+..+++....++..|.+++++ ++++.+.|++.+.+.+++.+++++.|+++||+|||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r 91 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAF----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK 91 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 44556667777778888999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---hccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIAS---GLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
+++..+.++++++++++ .++++ ++.++++|+++|++.|...+....++.|+.|+++|.+.+++.+....+|
T Consensus 92 ~~l~~g~~~~~~~~~l~~~~~~a~~------~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G 165 (438)
T PRK10133 92 AGIITGLFLYALGAALFWPAAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFG 165 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHH
Confidence 99999999999999886 45677 7999999999999999999999999999888877777899999999999
Q ss_pred HHHHHHHHHHHHHHhhhc-cCCCCCCC--CCccccCC-CCCcchHHHHHh-hhHHHHHHHHH-HHhCCCChhhHHHhhcc
Q 046667 176 ILAGGIFALIVSSAFNAA-FKAPAYED--DPIASTAP-QADYLWRIIVMV-GALPAALTYYW-RMKMPETARYTALVAKN 249 (540)
Q Consensus 176 ~~~g~~~~~~l~~~~~~~-~~~~~~~~--~~~~~~~~-~~~~gwr~~f~~-~~~~~~~~~~~-~~~~~esp~~~~~~~~~ 249 (540)
..+++.++..+....... ..+..... +.... .. ....+||++|+. .++..++.++. ....||.++. ++
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~-w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~-----~~ 239 (438)
T PRK10133 166 AIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSA-YKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD-----NH 239 (438)
T ss_pred HHHHHHHHHHHHhcCCcccchhhhhccChhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-----cc
Confidence 999999987764111000 00000000 00000 00 000257777764 33333333222 2334442211 00
Q ss_pred HHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HH-hc
Q 046667 250 AKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF-SA-VG 327 (540)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g 327 (540)
.++.. .+..++..+.++++..+ ......++.....++...|.+.++ ++ .|
T Consensus 240 ~~~~~---------------------~~~~~~~~~ll~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g 291 (438)
T PRK10133 240 SDAKQ---------------------GSFSASLSRLARIRHWR-------WAVLAQFCYVGAQTACWSYLIRYAVEEIPG 291 (438)
T ss_pred ccccc---------------------cchhhhHHHHHhCchHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 00000 00000011122222211 111222223333444444555553 32 45
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHH
Q 046667 328 WIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFV 407 (540)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (540)
.++.. +........++.++++++++++.||+++|+.+..+..+..+.+++..+.. ....
T Consensus 292 ~s~~~------------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-------~~~~-- 350 (438)
T PRK10133 292 MTAGF------------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-------GHVG-- 350 (438)
T ss_pred CCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-------ChHH--
Confidence 55544 33366777788899999999999999999988887766655554443322 1111
Q ss_pred HHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcc-hhhHH
Q 046667 408 IIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIG-VKNSL 486 (540)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g-~~~~~ 486 (540)
.......+++.....|..++...|..|++ .+++.++.. ...+|+.++|.+.|.+.| ..| .+..|
T Consensus 351 ~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~-------------~~g~~~~~~ 415 (438)
T PRK10133 351 LIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSD-------------AAGNIPTAE 415 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHH-------------hccchHHHH
Confidence 22223334444455678888888887764 678888886 455788999999999985 344 56777
Q ss_pred HHHHHHHHHHH
Q 046667 487 IVLGVVNLLGL 497 (540)
Q Consensus 487 ~~~~~~~~~~~ 497 (540)
++..++.+...
T Consensus 416 ~v~~~~~~~~~ 426 (438)
T PRK10133 416 LIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHHH
Confidence 65544444433
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=3.4e-28 Score=242.80 Aligned_cols=385 Identities=12% Similarity=0.068 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-----chhH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-----GRKK 99 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-----Grr~ 99 (540)
.....+..+..++.....+..+|...++. +.+.+++|.+ +.....+ ++.+++|+++||+ ||||
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~----------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVE----------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 44455566677777788888999888887 8999999997 4444444 6899999999999 9998
Q ss_pred H-HHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 100 V-YGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 100 ~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
. ++.+.+..+++..++++.+.. .+++.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~---~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPG---TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 5 667888887887777776421 227889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
++.++.++.+. ..|||..|++.++..++..+..++.||+++. .. ++ ++..+..
T Consensus 159 g~~l~~~l~~~----------------------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~--~~-~~-~~~~~~~- 211 (491)
T PRK11010 159 SGGLALWLADR----------------------YLGWQGMYWLMAALLIPCIIATLLAPEPTDT--IP-VP-KTLEQAV- 211 (491)
T ss_pred HHHHHHHHHhc----------------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCccc--cc-cc-cchhhhH-
Confidence 99998888531 2469999999887777766665667886542 10 00 0000000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF-SAVGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 337 (540)
.+ +..+.++ ++. .+......+......+....+.+.++ +..|+++.+
T Consensus 212 ----------~~----------~l~~~~~----~~~---~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~----- 259 (491)
T PRK11010 212 ----------VA----------PLRDFFG----RNN---AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGE----- 259 (491)
T ss_pred ----------HH----------HHHHHHc----CcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----
Confidence 00 0001111 111 11111111222222333333444443 445665544
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHh
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFA 417 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (540)
.+........++.+++.+++|+++||+|+|+.+..+.++.++..+.+..... . .++.+.......+.....
T Consensus 260 ------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~--~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 260 ------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI-T--DKNLYSMGAAVFFENLCG 330 (491)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-c--cccHHHHHHHHHHHHHHH
Confidence 2222334555678889999999999999988777665544443332221110 0 011122111111111111
Q ss_pred hcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 046667 418 NFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497 (540)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (540)
+.+. +..+++..+..+++.+++..|+.+....+|..+++.+.|.+.| ..||+..|.+.+++++++.
T Consensus 331 g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~-------------~~G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 331 GMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE-------------AHGWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhChHHHHHHHHHHHHHHH
Confidence 1111 3345677788888899999999999999999999999999995 5578888998888888887
Q ss_pred HHHHhcccC
Q 046667 498 LFTFLVPES 506 (540)
Q Consensus 498 ~~~~~~~~~ 506 (540)
+...+.+++
T Consensus 397 ~~~~~~~~~ 405 (491)
T PRK11010 397 LLLLVCRQT 405 (491)
T ss_pred HHHHHHHhc
Confidence 777766544
No 66
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.7e-27 Score=233.25 Aligned_cols=336 Identities=14% Similarity=0.128 Sum_probs=220.0
Q ss_pred HHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVI 110 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i 110 (540)
..+..........+.+|.+.+++ +.+..+.++..+.+.++..+++++.|+++||+|||++++.+.++.++
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADL----------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 34444444455568899999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046667 111 CSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAF 190 (540)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 190 (540)
+.+++.++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+
T Consensus 81 ~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-- 152 (392)
T PRK10473 81 ASLLCSLAET------SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-- 152 (392)
T ss_pred HHHHHHHhCc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999888 78899999999999999999999999999999999999999999999999999999887742
Q ss_pred hhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhH
Q 046667 191 NAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEE 269 (540)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (540)
..+||+.|++.++..++..+. .+++||+++. . ++++++..+
T Consensus 153 ---------------------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~-~~~~~~~~~-------------- 194 (392)
T PRK10473 153 ---------------------KFPWQSLFYTMAAMGILVLLLSLFILKETRPA--R-APAASSKPR-------------- 194 (392)
T ss_pred ---------------------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc--c-cCCccchHH--------------
Confidence 346999999977766654443 4567776432 1 000000000
Q ss_pred hhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHH
Q 046667 270 QKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQ 348 (540)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 348 (540)
...+.++++.... ........ .........+.|.++. +.|+++.. ....
T Consensus 195 -----------~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~------------~~~~ 244 (392)
T PRK10473 195 -----------ENSESLLNRFFLS---RLVITTLS----VTVILTFVNTSPVLLMEQMGFSRGE------------YAII 244 (392)
T ss_pred -----------HHHHHHhCHHHHH---HHHHHHHH----HHHHHHHHHhCHHHHHHHcCCCHHH------------HHHH
Confidence 0001111211111 11111111 1111122223344433 34554332 2224
Q ss_pred HHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeee
Q 046667 349 TLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVV 428 (540)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (540)
.....++.+++.++.+++.||+|||+.+..+..+..++.+.+..... ..........+..+.... . +. ..
T Consensus 245 ~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~g~~~~-~-~~--~~ 314 (392)
T PRK10473 245 MALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS------HAVSLFGITLICAGFSVG-F-GV--AM 314 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH-h-HH--HH
Confidence 55566777888899999999999999988888777766665554431 111111111222222111 1 11 22
Q ss_pred ecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 429 PAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
..+..|.+.|+ |.......++..+++.+.+.+.+
T Consensus 315 ~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 315 SQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 23444544442 44445555666777777777764
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=8.8e-28 Score=234.30 Aligned_cols=335 Identities=17% Similarity=0.182 Sum_probs=222.6
Q ss_pred hHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhc
Q 046667 38 DLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGL 117 (540)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~ 117 (540)
......|.+|.+.+++ +.++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+
T Consensus 6 ~~~~~~p~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAADF----------GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3455678899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 046667 118 SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAP 197 (540)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~ 197 (540)
+++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+.
T Consensus 76 ~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------- 141 (377)
T PRK11102 76 AQT------IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-------- 141 (377)
T ss_pred Hcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 888 799999999999999999999999999999999999999999999999999999999988643
Q ss_pred CCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH-HHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhh
Q 046667 198 AYEDDPIASTAPQADYLWRIIVMVGALPAALTYY-WRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELD 276 (540)
Q Consensus 198 ~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (540)
.+||+.|++.++..++..+ ..++.||+++.. + +++.+..+ ..+
T Consensus 142 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~---------------~~~--- 185 (377)
T PRK11102 142 ---------------FSWHAIFWVLALAAILAAALVFFFIPETLPKE--R-RQPFHLRT---------------TIR--- 185 (377)
T ss_pred ---------------cChHHHHHHHHHHHHHHHHHHHHhCCccCccc--c-cCCCChHH---------------HHH---
Confidence 3499999987776666544 345677764321 0 00000000 000
Q ss_pred cccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhh
Q 046667 277 RDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCS 355 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (540)
+..+.++++ ..+......++.....+....+.|.++.+ .|+++.+ .........++
T Consensus 186 ----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------------~g~~~~~~~~~ 242 (377)
T PRK11102 186 ----NFASLFRHK-------RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN------------FGYYFALNIVF 242 (377)
T ss_pred ----HHHHHHcCh-------HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH------------HHHHHHHHHHH
Confidence 000111111 11111222222222333333344444433 4555443 22255566777
Q ss_pred hhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCch
Q 046667 356 TVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435 (540)
Q Consensus 356 ~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (540)
.+++.++.+++.||+|+|+.+..+..+..+..+.+...... ....+...+...+...... ...+....+..|..|
T Consensus 243 ~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 317 (377)
T PRK11102 243 LFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAFVGCVS-MISSNAMAVILDEFP- 317 (377)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHH-HhhHHHHHHHhcccc-
Confidence 88889999999999999998887776544433322221100 0011222222222222211 122233345567666
Q ss_pred hhhhhhhHHHHHHHH-HhHHHHHHHH
Q 046667 436 RLRSTCHGISAASGK-LGAIVGAFGF 460 (540)
Q Consensus 436 ~~~~~~~g~~~~~~~-~g~~i~~~i~ 460 (540)
+.++++.++.+.... ++..+++.+.
T Consensus 318 ~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 318 HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 779999999877654 4555555543
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=3.5e-27 Score=230.36 Aligned_cols=361 Identities=15% Similarity=0.153 Sum_probs=234.7
Q ss_pred HHHhHhHHHHHHH-hhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHH
Q 046667 35 DAYDLFCISLVTK-LLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSI 113 (540)
Q Consensus 35 ~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~ 113 (540)
........-+.++ .+.+++ +.|..+.|++.++..++..+.+++.|+++||+|||+++..+.++.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~----------g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 22 VVLGFFVVFPLISIRFVDQL----------GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3333333344444 466777 89999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 046667 114 ASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAA 193 (540)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 193 (540)
++.+.++ ++.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+|+.+++.+.
T Consensus 92 ~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~------ 159 (400)
T PRK11646 92 TMAIAHE------PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL------ 159 (400)
T ss_pred HHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 9999887 7899999999999988888999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhh
Q 046667 194 FKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKI 272 (540)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (540)
..+||+.|++.++..++..+. .++.||.++. +..++..+
T Consensus 160 ------------------~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~----------------- 199 (400)
T PRK11646 160 ------------------QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-----TVRTPVRE----------------- 199 (400)
T ss_pred ------------------HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-----ccchhhHH-----------------
Confidence 234999999977766554433 3445542110 00000000
Q ss_pred hhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHH
Q 046667 273 QELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIA 352 (540)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
...+.++++. ++......+...........+.|.+.++.+..+.. .+... ...
T Consensus 200 --------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~g~l~-~~~ 252 (400)
T PRK11646 200 --------GMTRVLRDKR-------FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSA-----------VKWMY-AIE 252 (400)
T ss_pred --------HHHHHHcCch-------HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchH-----------HHHHH-HHH
Confidence 0001111111 11111111111112222334567776664443322 22222 222
Q ss_pred Hhhhhh-hHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecc
Q 046667 353 LCSTVP-GYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAE 431 (540)
Q Consensus 353 ~~~~~~-~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (540)
.+..+. ..++..+..||++.++.+..+..+.+++..++.... +.+ .+....+..+.+.....|...+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~-~~~~~~~l~~~g~~~~~p~~~~~~~~ 324 (400)
T PRK11646 253 ACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS-------NLQ-QLFTLICLFYIGSIIAEPARETLSAS 324 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh-------hHH-HHHHHHHHHHHHHHHHHccHHHHHHh
Confidence 222332 333344444556666666666666666655554333 112 22222222222222334555678889
Q ss_pred cCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 432 IFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 432 ~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
..|++.||++.|+.+....+|..++|.+.|.+.|..+. .......++..+++.+++.+...
T Consensus 325 ~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 325 LADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKA---------LNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred cCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhh---------cCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986431 11234555555566555554433
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=9.2e-27 Score=227.21 Aligned_cols=369 Identities=11% Similarity=-0.049 Sum_probs=244.3
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMT 104 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~ 104 (540)
++.+++..+..++.....++..|.+++++ ++++.+.|++.+.+.+++.+++++.|++.||+|||+++..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~----------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAF----------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 44566777888888888999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc---CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHH
Q 046667 105 LMLMVICSIASGLS---FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (540)
Q Consensus 105 ~~~~~i~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (540)
.++++++.+++..+ ++ ++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~------~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMN------YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHhhcc------HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886543 34 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCcc---ccCCCCCcchHHHHHhhhHHHHHHHHHHHh--CCCChhhHHHhhccHHHHHHH
Q 046667 182 FALIVSSAFNAAFKAPAYEDDPIA---STAPQADYLWRIIVMVGALPAALTYYWRMK--MPETARYTALVAKNAKQAASD 256 (540)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~ 256 (540)
++..+................... .....+..+||++|++.+++.++..+...+ .||.++. ++++ .
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~------~~~~--~- 219 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHS------DAKQ--I- 219 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc------cccc--c-
Confidence 998875321100000000000000 000012346999999877766654444333 3331110 0000 0
Q ss_pred HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchh
Q 046667 257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMN 336 (540)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (540)
....+..+.++++. ++......++......+...+.+.+..+.+...+.
T Consensus 220 --------------------~~~~~~~~~~~~~~-------~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~---- 268 (410)
T TIGR00885 220 --------------------SFSASLSRLARIRH-------YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA---- 268 (410)
T ss_pred --------------------cchhhHHHHHhChh-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH----
Confidence 00000001112221 11122223333333444455666665543222111
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 337 AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
..+............+|+++++++.||+++|+.+.+...+..++.++...... ......+.+.+ +
T Consensus 269 ------~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~--------~~~~~~l~~~g-l 333 (410)
T TIGR00885 269 ------GFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGG--------HVGLYCLTLCS-A 333 (410)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC--------hHHHHHHHHHH-H
Confidence 01111233333556789999999999999999888877777776666655331 12222333333 3
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhc
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQS 466 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~ 466 (540)
+....+|..++...+..+++.+..+.++.... +|+.+.|.+.|.+.|.
T Consensus 334 f~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 334 FMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 33334588888889999887665555555544 9999999999999974
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.3e-27 Score=232.19 Aligned_cols=357 Identities=17% Similarity=0.203 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
..+++.+....+....++..|. +.+++ ++|..+.+++.+++.+++.+++++.|+++||+|||++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDL----------GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHh----------CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 4556666777777888999995 88999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC-CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 046667 106 MLMVICSIASGLSF-GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAL 184 (540)
Q Consensus 106 ~~~~i~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 184 (540)
++..++.+++++++ + ++.+++.|+++|++.+ ..+....++.|++|+++|+++.++.....++|..+++.+++
T Consensus 75 ~~~~i~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS------YSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999998 7 7999999999999855 45678899999999999999999999888899988888887
Q ss_pred HHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHH-hhhHHH-HHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHh
Q 046667 185 IVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVM-VGALPA-ALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQ 262 (540)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~-~~~~~~-~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (540)
.+......... .....+||+.|+ ..++.. ++.++...+.+|+|+.. . ++.+. ...+
T Consensus 148 ~l~~~~~~~~~-------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~---~~~~--- 205 (366)
T TIGR00886 148 PIIGSLIFGAG-------------LPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK--P-ATGKL---SFKG--- 205 (366)
T ss_pred HHHHHHHhccc-------------ccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc--c-cchhc---cccc---
Confidence 77654321000 012347999994 434433 33444445567765421 0 00000 0000
Q ss_pred hhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHH
Q 046667 263 VELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEV 341 (540)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 341 (540)
.... .++ +......+.++++ .++......++.....+....+.+.++++ .|+++.+
T Consensus 206 -~~~~----~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--------- 262 (366)
T TIGR00886 206 -ARWS----VGT--GALGDQLKVFRDR-------HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVT--------- 262 (366)
T ss_pred -cccc----ccc--hhHHHHHHHHhcc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH---------
Confidence 0000 000 0000011111111 12222333333333455556667777654 3554433
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGP 421 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (540)
+........+..+++.++++++.||+|+|+.+..+......+..++..... ...+.........+.....+. .
T Consensus 263 ---~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~-~ 335 (366)
T TIGR00886 263 ---AGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---SPLSLAVFIVLFVALFFFSGA-G 335 (366)
T ss_pred ---HHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHhcc-c
Confidence 222455556677788899999999999988877776665555555443321 000122222222222222222 3
Q ss_pred ccceeeeecccCchhhhhhhhHHHHHHHHHhH
Q 046667 422 NATTFVVPAEIFPARLRSTCHGISAASGKLGA 453 (540)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 453 (540)
.+..+++..+..| +.+|+++|+.+..+++|+
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 3456677788887 579999999999887763
No 71
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=7.8e-27 Score=228.03 Aligned_cols=362 Identities=12% Similarity=0.059 Sum_probs=225.2
Q ss_pred HHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHH-HHHHhhhhhhhhhhhcchhHHH-HHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFC-GTLAGQLFFGWLGDKLGRKKVY-GMTLMLM 108 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~Dr~Grr~~~-~~~~~~~ 108 (540)
.++.........+.+|. +.+++ +.+.++.|++.+...+ +..++.++.++ +||+||||.+ ..+.++.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEV----------HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence 44444454555566555 56778 8999999999876655 55666655666 9999999875 5566766
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccc--hhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 109 VICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR--GAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
+++..+.+++++ ++.+++.+.+.|...+...+...+++.|+.++++| +...++.+++.++|.++|+++++.+
T Consensus 93 ~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 93 VLACTLFAWNRN------YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHhhH------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 778888888877 67766555554444467788888999998877655 3455788889999999999999998
Q ss_pred HHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhc
Q 046667 187 SSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVEL 265 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (540)
.+. .|||..|++.++..++..+. .+++||+++.. ++.++
T Consensus 167 ~~~-----------------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------- 206 (393)
T PRK15011 167 AMG-----------------------FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKEL---PLATG-------------- 206 (393)
T ss_pred HHh-----------------------cChHHHHHHHHHHHHHHHHHHHhhcCccCCCC---ccccc--------------
Confidence 643 45999999987766655444 45678765320 00000
Q ss_pred hhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHH
Q 046667 266 EAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKI 344 (540)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 344 (540)
+.+. .+ ++ ++....... ........++....+.|.++++ .++++.. .
T Consensus 207 -----~~~~---~~-------~~---~~~~~~~~~---~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~-----------~ 254 (393)
T PRK15011 207 -----TLEA---PR-------RN---RRDTLLLFV---ICTLMWGTNSLYIINMPLFIINELHLPEKL-----------A 254 (393)
T ss_pred -----cccc---cc-------cc---cccHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------H
Confidence 0000 00 00 000011111 1111112233334456666543 4544332 1
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
+. ......+..+++.++.|+++||++||+.+..+.....+....+.... +.+..+. ..+..++......+.
T Consensus 255 g~-~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~-~~~l~~~~~g~~~~~ 325 (393)
T PRK15011 255 GV-MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-------SPAILLG-LQLLNAIYIGILGGI 325 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHH-HHHHHHHHHHHHHHH
Confidence 22 33334455677888999999999999877766554444332222111 1222221 111111111111122
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
...+..|..|+ .++++.++.+...++|..++|.+.|.+.+ .+||+..|.+.+++.+++.+..++.|
T Consensus 326 ~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 326 GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE-------------IWNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 33456788876 49999999999999999999999999984 56888888888888888777776665
Q ss_pred c
Q 046667 505 E 505 (540)
Q Consensus 505 ~ 505 (540)
|
T Consensus 392 ~ 392 (393)
T PRK15011 392 D 392 (393)
T ss_pred C
Confidence 4
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=1.5e-26 Score=226.77 Aligned_cols=350 Identities=14% Similarity=0.100 Sum_probs=231.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHH
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKV 100 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~ 100 (540)
.++.+.+..+..+...+......+.+|.+.+++ +.++.+.+++.+++.++..+++++.|+++||+|||++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~ 75 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDL----------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPV 75 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH
Confidence 345555555555566677777788899999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHH
Q 046667 101 YGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (540)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (540)
+..+.++..++.+++.++++ ++.+++.|++.|++.+...+....+..|++++++|+++.++...+..+|..++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 149 (394)
T PRK11652 76 ILVGMSIFILGTLVALFAHS------LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAP 149 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888 799999999999998888888889999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHH-HHHHhCCCChhhHHHhhccHHHHHHHHHH
Q 046667 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTY-YWRMKMPETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
.+++.+.+ ..|||+.|++.++..++.. +..++.||+++.. +++++..+.
T Consensus 150 ~i~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--- 199 (394)
T PRK11652 150 LIGGLLTT-----------------------LFGWRACYLFLLLLGAGVTFSMARWMPETRPAD----ARRTRVLAS--- 199 (394)
T ss_pred HHHHHHHh-----------------------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cchhHHHHH---
Confidence 99988753 3459999999776665543 3445678765421 000000000
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAI 338 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 338 (540)
..+.++++..+ ..+...+..+ ........+.+.++++ .|+++..
T Consensus 200 ----------------------~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~------ 244 (394)
T PRK11652 200 ----------------------YRTLLSNRRFN----CYLLMLIGTL---AGIAVFEACSGVLMGAVLGLSSMT------ 244 (394)
T ss_pred ----------------------HHHHHcChHHH----HHHHHHHHHH---HHHHHHHHhChHHHHHHcCCCHHH------
Confidence 00111222111 1111111111 1112222233344444 4444322
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHH-HHHHHHHhcccccccCCchhHHHHHHHHHHHHh
Q 046667 339 QEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMT-VFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFA 417 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (540)
.........++.+++.++.+++.||.+++........... +......... ..+.+. .....+..+++
T Consensus 245 ------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~g 312 (394)
T PRK11652 245 ------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFG-----VMNVWT-LLVPAALFFFG 312 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccHHH-HHHHHHHHHHH
Confidence 1223444566777777888888888874332221211111 1111111111 011222 22222223333
Q ss_pred hcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHh
Q 046667 418 NFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLA 464 (540)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~ 464 (540)
.....|...++..|.+| +.++++.++.+....+|+.+++.+.+.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33345666677778887 46899999999999999999999998876
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=1.3e-26 Score=227.08 Aligned_cols=387 Identities=11% Similarity=0.031 Sum_probs=242.5
Q ss_pred HHHHHHHHhHhHH-HHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch-hHHHHHHHHH
Q 046667 30 MGFFTDAYDLFCI-SLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR-KKVYGMTLML 107 (540)
Q Consensus 30 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr-r~~~~~~~~~ 107 (540)
+..+.++...... ++..+.+.+++ +++..+.|++.+++.++..++++++|.++||+|| |+++.++.++
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~ 78 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTL----------HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFA 78 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 3445555555544 55556677777 8999999999999999999999999999999965 7788888888
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhh--------cCcccchhHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEY--------ANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~--------~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
..++..+..+.++ ++.+++.|++.|++.+...+...++...+ .....|.|..| .+|.+++
T Consensus 79 ~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig 146 (418)
T TIGR00889 79 GALLLFFAAQVTT------PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAA 146 (418)
T ss_pred HHHHHHHHHHhcC------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHH
Confidence 8888888888887 78899999999998877777666654222 22233444444 3678888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
+.+++.+.. ...|+. |++.++..++..+..+++||+|+. .++++ .+..+.
T Consensus 147 ~~l~g~l~~-----------------------~~~~~~-f~~~~~~~~~~~~~~~~~~e~~~~--~~~~~-~~~~~~--- 196 (418)
T TIGR00889 147 MWAVSLLDI-----------------------ELSNIQ-LYITAGSSALLGVFALTLPDIPVA--KSTAK-MSIKVM--- 196 (418)
T ss_pred HHHHHHhcc-----------------------cchhHH-HHHHHHHHHHHHHHHhcCCCCCCC--ccccc-cCHHHH---
Confidence 888876621 122554 445444455544555678887642 11000 000000
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQ 339 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (540)
.+.+..+.++++. ++......++..........+.+.+.++.|.++.... .
T Consensus 197 ------------------~~~~~~~~~k~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~ 247 (418)
T TIGR00889 197 ------------------LGLDAFILFKNKR-------MAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFAD----S 247 (418)
T ss_pred ------------------hhhhHHHHhcCCC-------eeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccc----h
Confidence 0000001111111 1112222222222233334555666666555442210 0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhc
Q 046667 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANF 419 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (540)
..............+..+++.++.+++.||+|+|+.+..+.++.+++..++..... .........+..++.+....
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~----~~~~~~~l~l~~~l~g~~~~ 323 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP----EYFGYALLFLSMIVYGCAFD 323 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----chhhHHHHHHHHHHHHHHHH
Confidence 00112233556666677888899999999999999999998888777666554321 00112222222333333333
Q ss_pred CCccceeeeecccCchhhhhhhhHHHH-HHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 046667 420 GPNATTFVVPAEIFPARLRSTCHGISA-ASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLL 498 (540)
Q Consensus 420 ~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (540)
...+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|.+.|..+.. ..+||+..|.+.+++.+++.+
T Consensus 324 ~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~-------~~~~~~~~f~~~~~~~~i~~~ 396 (418)
T TIGR00889 324 FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY-------GTFDWQTMWLFFAGYIAILAV 396 (418)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-------cCCchHHHHHHHHHHHHHHHH
Confidence 334555667899999999999999997 567899999999999999865420 125799999888888777776
Q ss_pred HHH-hcccCCC
Q 046667 499 FTF-LVPESKG 508 (540)
Q Consensus 499 ~~~-~~~~~~~ 508 (540)
..+ +++|+++
T Consensus 397 l~~~~~~~~~~ 407 (418)
T TIGR00889 397 LFMIFFKYSHN 407 (418)
T ss_pred HHHHHhCCccc
Confidence 666 6665533
No 74
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=8.2e-27 Score=227.37 Aligned_cols=365 Identities=12% Similarity=0.085 Sum_probs=241.0
Q ss_pred HHHHHHHHhHhHHHHHHH-hhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHH
Q 046667 30 MGFFTDAYDLFCISLVTK-LLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLM 108 (540)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~ 108 (540)
+..++.........+.+| .+.+++ +++..+.|++.+++.++..+++++.|+++||+|||++++++.++.
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQY----------SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 344444555555555554 566778 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 109 VICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
+++.++.+++++ ++.++++|++.|.+.+...+...++..|.+|+++|+++.++.....++|.+++|.+++.+..
T Consensus 84 ~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 84 ASGFIAIPLVNN------VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888 68888899999988788888899999999999999999999999999999999999998852
Q ss_pred HhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchh
Q 046667 189 AFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEA 267 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (540)
.+|+..|++.++..++..+. .+++||+++. . +++++.
T Consensus 158 ------------------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~--~--~~~~~~-------------- 195 (395)
T PRK10054 158 ------------------------QSINLPFWLAAICSAFPLVFIQIWVQRSEKA--I--ATETGS-------------- 195 (395)
T ss_pred ------------------------hccCcHHHHHHHHHHHHHHHHHHHHhccccc--c--ccchhh--------------
Confidence 34999999877766665443 3445554321 0 000000
Q ss_pred hHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHH
Q 046667 268 EEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARA 347 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (540)
. .+..+.++++. ++......++..........+.+.+.... . ..+ .+....+ .
T Consensus 196 ---~--------~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~--~~~----~~~~~~g-~ 248 (395)
T PRK10054 196 ---V--------WSPSVLLQDKA-------LLWFTCSGFLASFVSGAFASCISQYVMVV--A--DSD----FAEKVVA-V 248 (395)
T ss_pred ---h--------hhhhhhccCce-------ehHHHHHHHHHHHHHHHhhhhHHHHHHHh--c--ccc----hHHHHHH-H
Confidence 0 00011112221 11112222222222222222333333221 0 000 0111112 2
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......+..+...+..+++.||.++|+.+..+..+..++...+.... +......+..+..+.+.....|...+
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 249 VLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG-------NSLLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-------hHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 33444445556667888999999999988888777776665554322 11222223333334444444456667
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
.+.+..|++.++++.+..+ ..++|..++|.+.|.+.| ..|+...|++.+++..++.++.
T Consensus 322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~-------------~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT-------------TLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH-------------HcChhhHHHHHHHHHHHHHHHH
Confidence 7889999999999998765 677999999999999995 4566666766555544444433
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=3.9e-26 Score=222.17 Aligned_cols=362 Identities=11% Similarity=0.033 Sum_probs=249.7
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH----HH
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY----GM 103 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~----~~ 103 (540)
+.+.++...+......|.+|.+.+++ +.|..++|++.+++.++..++++++|+++||+|||+.. ..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~----------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 78 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGI----------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 44567777777788889999999998 99999999999999999999999999999999985433 22
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+..+..+ ..+..+++ ++.+++.|+++|.+.+...|...++..++ +++|++..+......++|.+++++++
T Consensus 79 ~~~l~~~--~~~~~~~~------~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~ 148 (382)
T TIGR00902 79 ASAIFAA--AFSAGAHN------AWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALF 148 (382)
T ss_pred HHHHHHH--HHHHhhhh------HHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHH
Confidence 2222222 23445666 79999999999999888899998988765 46789999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhh
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQV 263 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (540)
+.+.+.. |||..|++..+..++.++ .+.++|+++. ..++++++
T Consensus 149 g~l~~~~-----------------------g~~~~f~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~----------- 191 (382)
T TIGR00902 149 GGLIGMF-----------------------DEQNILAILTAGLAFMLI-GFLIKPTIPP--KDAIPEDE----------- 191 (382)
T ss_pred HHHHHHc-----------------------ChhHHHHHHHHHHHHHHH-HHHcCCCCCC--Cccccccc-----------
Confidence 9996544 499999886554333333 2333443211 00000000
Q ss_pred hchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHH
Q 046667 264 ELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYK 343 (540)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (540)
.+..++..+.++++ .++......++..........+.+.++++.|.++...+.
T Consensus 192 ------------~~~~~~~~~~l~~~-------~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~-------- 244 (382)
T TIGR00902 192 ------------SQGDSAFIALLKNP-------MNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGL-------- 244 (382)
T ss_pred ------------cccchhHHHHHcCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHH--------
Confidence 00000111222222 222233333333444555556777787777776655222
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcc
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNA 423 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (540)
......+..+++.++.+++.||+|+|+.+.++.+...+....+.+.. ....+....+..++......+
T Consensus 245 ----l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~q~l~g~~~~~~~~ 312 (382)
T TIGR00902 245 ----LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--------AFPLIFLLQILHCGTFAVCHL 312 (382)
T ss_pred ----HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--------hHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888889999999999999999999888888887776543 233333344444444444445
Q ss_pred ceeeeecccCchhhhhhhhHHHHH-HHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 424 TTFVVPAEIFPARLRSTCHGISAA-SGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
....++.+. |++.++++.++.+. ...+|..++|.+.|++.| ..|+ ..|+..+++.+++.++.
T Consensus 313 ~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~-------------~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 313 AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP-------------TLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccH-HHHHHHHHHHHHHHHHH
Confidence 566777887 99999999999874 567899999999999995 4454 56777777777665443
No 76
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=1.4e-26 Score=223.50 Aligned_cols=332 Identities=14% Similarity=0.099 Sum_probs=233.2
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
...++.+|.+.+++ +.+.++.+++.+++.++..+++++.|+++||+|||+++.++.++..++.+++ .++
T Consensus 17 ~~~~~~lp~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 17 TSVGPLLPQIRSAL----------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred ccCcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 45678999999999 9999999999999999999999999999999999999999999988888877 666
Q ss_pred CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 046667 120 GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAY 199 (540)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~ 199 (540)
+ ++.+++.|++.|++.+...+....++.|++| ++|+++.++.+.+.++|..+++.+++.+.+..+
T Consensus 86 ~------~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-------- 150 (355)
T TIGR00896 86 G------TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-------- 150 (355)
T ss_pred c------HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------
Confidence 6 6888999999999999888888889999996 689999999999999999999999888764321
Q ss_pred CCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhccc
Q 046667 200 EDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDK 279 (540)
Q Consensus 200 ~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (540)
.+||+.|.+.++..++..+ .++||.++. . +++ ....+
T Consensus 151 -------------~~w~~~f~~~~~~~~~~~~--~~~~~~~~~--~-~~~-------------------------~~~~~ 187 (355)
T TIGR00896 151 -------------GHWQQALAWWALPALLALL--AWIPQVRRR--V-AAN-------------------------QTTTR 187 (355)
T ss_pred -------------hhHHHHHHHHHHHHHHHHH--HHhhhhccc--c-CCC-------------------------CCCCC
Confidence 2399998876654443322 234443211 0 000 00000
Q ss_pred CCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q 046667 280 GNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPG 359 (540)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (540)
....+.++++. .+......++....++....+.|.++++.|+++.. .........++.+++
T Consensus 188 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------------~g~~~~~~~~~~i~~ 248 (355)
T TIGR00896 188 LTPVRIWRSPL-------AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAAT------------AGSLLALMQLAQAAS 248 (355)
T ss_pred CCCchhhcCHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHH
Confidence 11122222221 22223333344455666777888888776665544 223566677788899
Q ss_pred HHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecc-cCchhh
Q 046667 360 YWFTVAFIDKI-GRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAE-IFPARL 437 (540)
Q Consensus 360 ~~~~~~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~ 437 (540)
+++.+++.||+ +||+.+..+..+.+++.+.+.+... ... .. ..+..+++.....+...+...+ ..+++.
T Consensus 249 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 319 (355)
T TIGR00896 249 ALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM------HGL-WA--WALVLGLGQGGAFPLALTLIGLRSRQAAQ 319 (355)
T ss_pred HHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh------hHH-HH--HHHHHHHhhhhHhHHHHHHHHHhccCHHH
Confidence 99999999999 4566666666666666555544331 111 11 1222333333334444444443 345677
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 438 RSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 438 ~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
++...++.+...+++..++|.+.|.+.|..+
T Consensus 320 ~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 320 AAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999997554
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=5.5e-26 Score=224.41 Aligned_cols=374 Identities=16% Similarity=0.059 Sum_probs=217.3
Q ss_pred HHHHHHHhHhHHHHHHH-hhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTK-LLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMV 109 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~ 109 (540)
..++.........+.+| .+.+++ +++..+.|++.+++.++..+++++.|+++||+|||++++++..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~----------g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDIN----------GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 34444444444445554 455557 8999999999999999999999999999999999999988766665
Q ss_pred HHHHHhh---ccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 110 ICSIASG---LSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 110 i~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
++..... .++.. ....+...++++++.|.+.....+....+..+ . .+++++.++......++|..+++.+++.+
T Consensus 88 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 164 (420)
T PRK09528 88 VLFGPFFIYVFAPLL-QYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGIL 164 (420)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHH
Confidence 4433221 11110 00001223344555555444444444444332 2 34567788888899999999999999988
Q ss_pred HHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC-CChhhHHHhhccHHHHHHHHHHHHhhhc
Q 046667 187 SSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP-ETARYTALVAKNAKQAASDMSKVLQVEL 265 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~-esp~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (540)
.+ .+|++.|++.++..++..+..++.+ |+++.. .. +++++. +
T Consensus 165 ~~------------------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~----------~- 207 (420)
T PRK09528 165 FN------------------------INPQINFWLGSGSALILLVLLFFAKPDAPSTA-KV-ANALGA----------N- 207 (420)
T ss_pred Hh------------------------cCchHhHHHHHHHHHHHHHHHhcccccccchh-hh-ccchhc----------c-
Confidence 52 2499999988777766555554443 332210 00 000000 0
Q ss_pred hhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----cCCCcccchhhHHHH
Q 046667 266 EAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV----GWIPSAKTMNAIQEV 341 (540)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~ 341 (540)
++....+ +..+.++++.. +......+.....+.....+.|.++.+. +....
T Consensus 208 -~~~~~~~-------~~~~~l~~~~~-------~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 262 (420)
T PRK09528 208 -ASAVSLK-------DALALLKLPKF-------WFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTR---------- 262 (420)
T ss_pred -cccccHH-------HHHHHccCCCe-------EeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchH----------
Confidence 0000000 00111122111 1111111111112222222334433321 11111
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGP 421 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (540)
..+ .......+..+++.++.+++.||+|+|+.+..+..+.++...++.+.. +.+.. ....+..+......
T Consensus 263 -~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~-------~~~~~-~~~~~l~g~~~~~~ 332 (420)
T PRK09528 263 -VFG-YLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT-------GPLEV-SILKLLHAFEVPFL 332 (420)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc-------cHHHH-HHHHHHHHHHHHHH
Confidence 112 234444556678888999999999999998888887777666665433 22222 22222222222222
Q ss_pred ccceeeeecccCchhhhhhhhHH-HHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 422 NATTFVVPAEIFPARLRSTCHGI-SAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
.+....++.|.+|++.+++..+. .+....+|.+++|.+.|++.| ..||+.+|...+++.++..++.
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-------------~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-------------SIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------------hhCchHHHHHHHHHHHHHHHHH
Confidence 23344677888899999888766 577788999999999999994 5688999998888877766665
Q ss_pred Hh
Q 046667 501 FL 502 (540)
Q Consensus 501 ~~ 502 (540)
++
T Consensus 400 ~~ 401 (420)
T PRK09528 400 VF 401 (420)
T ss_pred HH
Confidence 53
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=5.5e-25 Score=217.47 Aligned_cols=376 Identities=14% Similarity=0.077 Sum_probs=256.4
Q ss_pred HHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHH
Q 046667 29 GMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLM 108 (540)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~ 108 (540)
+++.++..+...+....++.+..+. .-|+...+++..+..+...+.++++|.++||++|||+++.+.++.
T Consensus 16 w~a~~iS~lG~~~~~va~~wlv~~l----------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~ 85 (524)
T PF05977_consen 16 WIAQLISNLGDWMQTVALAWLVTQL----------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLR 85 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 3444444555555566666666666 678899999999999999999999999999999999999999887
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 109 VICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
++..++.++..... ..+.+.+++.-++.|++.+...|+..+++.|..|+++...+.++.+...++..++||.++|.+..
T Consensus 86 ~~~~~~L~~l~~~~-~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva 164 (524)
T PF05977_consen 86 ALVALLLAVLAFFG-LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA 164 (524)
T ss_pred HHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 76555544321110 01268899999999999999999999999999999999999999999999999999999999987
Q ss_pred HhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhh
Q 046667 189 AFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAE 268 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (540)
..+ -.+.|++.++..++.++....++.+++. .+..++.-.++.
T Consensus 165 ~~G-----------------------~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l----------- 207 (524)
T PF05977_consen 165 FFG-----------------------AAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSAL----------- 207 (524)
T ss_pred HHH-----------------------HHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhH-----------
Confidence 665 5778888776655554444444332211 000001000000
Q ss_pred HhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHH
Q 046667 269 EQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARA 347 (540)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 347 (540)
.+-++.....+..+..+...... +.........+|.+.++ .+..+..++.
T Consensus 208 --------------~~G~ryv~~~~~l~~~l~~~~~~---~l~~~a~~aLlPl~a~~~l~~~a~~yGl------------ 258 (524)
T PF05977_consen 208 --------------REGLRYVRSSPPLRSVLLRSFLF---NLFASAVWALLPLFARDVLGGGASGYGL------------ 258 (524)
T ss_pred --------------HHHHHHHhcchHHHHHHHHHHHH---HHhhhHHHHhhhHHHHHHhCCcHHHHHH------------
Confidence 00011111111111122111111 12222223345665543 4444433222
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
.....++|.++|.++.+++.+|+++++.+..+.+..+++.+.+++.. + .+......+..+++.........+
T Consensus 259 l~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~-------~-~~~~~~~l~l~G~~~~~~~~~~~t 330 (524)
T PF05977_consen 259 LLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP-------S-FWLALIALFLAGAAWIIANSSLNT 330 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch-------H-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777889999999999999999998888888888777777766654 2 223333333344444444455667
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
..++..|++.||++++++.+....+..+|..+.|.+.+ .+|.+.++.+.++..+++.++...
T Consensus 331 ~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~-------------~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 331 LVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD-------------HFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999995 567777887777766666665553
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=6.2e-25 Score=215.48 Aligned_cols=377 Identities=14% Similarity=0.065 Sum_probs=240.8
Q ss_pred HHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-----chhH-HHHH
Q 046667 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-----GRKK-VYGM 103 (540)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-----Grr~-~~~~ 103 (540)
.-++.+++........+|.+.++. +.|.+++|++..+... .+..+++|+++||+ |||| ++.+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~----------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~ 73 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVE----------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLL 73 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHH
Confidence 446777888888888999988888 9999999999777776 69999999999999 8875 7888
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
+.++.+++..+.++.+.. .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.++
T Consensus 74 ~~~~~~l~~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~ 150 (402)
T PRK11902 74 TQVGLAASIAAMAFCPPH---AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLA 150 (402)
T ss_pred HHHHHHHHHHHHHhcCcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHH
Confidence 888888888887776431 12677888888888888889999999999999999999999999999999999999988
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhh
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQV 263 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (540)
..+.+. ..|||..|++.++..++..+..+++||+++.. .++ ++..+..
T Consensus 151 ~~l~~~----------------------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~--~~~--~~~~~~~------ 198 (402)
T PRK11902 151 LWLADR----------------------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA--RPP--RSLGEAV------ 198 (402)
T ss_pred HHHHhc----------------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc--ccc--chhHHHH------
Confidence 887531 23699999997777666555556677765421 000 0000000
Q ss_pred hchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHH
Q 046667 264 ELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYK 343 (540)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (540)
.+ ...+.++++.. +..+.............+ ....+.+.++.|+++..
T Consensus 199 -----~~----------~~~~l~~~~~~----~~~l~~~~l~~~~~~~~~--~~~~~~l~~~~G~~~~~----------- 246 (402)
T PRK11902 199 -----VG----------PLRDFFSRRGA----WALLLLIVLYKLGDAFAG--SLSTTFLIRGAGFSAGE----------- 246 (402)
T ss_pred -----HH----------HHHHHHhCcCH----HHHHHHHHHHHhHHHHHH--HHHHHHHHHhcCCCHHH-----------
Confidence 00 00111122111 111111111111111111 12223344445665443
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHH---HHHHHhhcC
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYS---LTFFFANFG 420 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 420 (540)
.+........++.+++.++++++.||+++|+.+..+..+..+..+.+...... .++.+....... +..+.....
T Consensus 247 ~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~ 323 (402)
T PRK11902 247 VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT---PKHLWTMALAIGIENLCGGMGTAA 323 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333445677888999999999999988776666555443333211100 011222222111 222233333
Q ss_pred CccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
..+....++.+.+|.+.+ ++.+....++..+++.+.|.+.| ..||+..|.+.+++++++.++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~-------------~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 324 FVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE-------------AYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH-------------HhChHHHHHHHHHHHHHHHHHH
Confidence 344555677777776544 45555566777766778999984 6788988988888888876666
Q ss_pred Hhccc
Q 046667 501 FLVPE 505 (540)
Q Consensus 501 ~~~~~ 505 (540)
+..++
T Consensus 387 ~~~~~ 391 (402)
T PRK11902 387 WLMRG 391 (402)
T ss_pred HHHhh
Confidence 54443
No 80
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=4.3e-25 Score=216.76 Aligned_cols=381 Identities=16% Similarity=0.118 Sum_probs=229.6
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHH
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLML 107 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~ 107 (540)
+++.....++.....+.+++.+..|+ +- .....|+.++..++.++++++.|.++|.||||..++.+.++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~di----------G~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADI----------GG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhc----------CC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 34444444555566677888898888 43 35778999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
..+|+++++.+++ ...++++..+.|+|.|... .....++|..|.|.|+...++...........++.++..+.
T Consensus 118 ~vvG~Iv~atA~~------~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 118 GVVGSIVCATAQN------MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HHhHHHHhhcCCc------HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 9999999999999 8999999999999976655 55666999999999977666555444444444555554431
Q ss_pred HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhc--cHHHHHHHHHHH-----
Q 046667 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAK--NAKQAASDMSKV----- 260 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~--~~~~~~~~~~~~----- 260 (540)
...+|||.|++.++...+.++..+++..+|++...+.+ .+++..++++-+
T Consensus 191 -----------------------~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~ 247 (599)
T PF06609_consen 191 -----------------------AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLF 247 (599)
T ss_pred -----------------------cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHH
Confidence 23469999999887766654443222222332112111 122222222211
Q ss_pred --------Hhhhchhh-Hhhhhh------------------hhcccCCc-cchhhHHHhhhhhHHHHHHHHHHHHHHHHH
Q 046667 261 --------LQVELEAE-EQKIQE------------------LDRDKGNG-YGLFSKEFLRRHGLHLLGTTSTWFLLDIAF 312 (540)
Q Consensus 261 --------~~~~~~~~-~~~~~~------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (540)
.+.+.... ..+.++ .-+..... ..++..+.++. .+.+....+..+..++.+
T Consensus 248 ~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~-~r~~~~~lvi~fi~G~~~ 326 (599)
T PF06609_consen 248 IAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKD-RRGFAALLVISFISGMNF 326 (599)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhcc-chHHHHHHHHHHHHHHHH
Confidence 00000000 000000 00000111 11222222222 234455555666666677
Q ss_pred HHHhhhHHHHHHHh-cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHH
Q 046667 313 YSQNLFQKDIFSAV-GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR-FAIQMMGFFFMTVFMFAL 390 (540)
Q Consensus 313 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~-r~~~~~~~~~~~~~~~~~ 390 (540)
|....+.|...... +-.+.... .......+...+...+.++.+.+..+++| |+.++++..++.+++.++
T Consensus 327 ~s~~~l~p~~~~~vf~~d~~~~~---------~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 327 FSVNILWPQQVVNVFGSDPISIT---------EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAM 397 (599)
T ss_pred HHHHHHHHHHHhhhccCCCcccc---------eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHH
Confidence 77776766655442 22211100 01124455566667777788889988887 455556666655544444
Q ss_pred HhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 391 AIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
..... .+....+ .+.++.+++...........++-..|++.-|++.|+..++..+|+.++..++..+..
T Consensus 398 a~~~~----~n~~~~i--~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 398 AAVRP----DNKNAAI--AFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHccC----CCcchHH--HHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44331 1112222 222222222222223344556667899999999999999999999999998877665
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=2.8e-25 Score=247.38 Aligned_cols=332 Identities=13% Similarity=-0.006 Sum_probs=215.9
Q ss_pred ChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhc---cCCCCcchhhHHHHHHHHHHhhccc
Q 046667 66 PPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGL---SFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 66 s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+....+++.+++.+++.++++++|+++||+|||++++++.++..++.++..+ +.+ ++.++++|+++|++.+
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~ 118 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW------FWLAFAVTFLLGAQSA 118 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999999999999999988776666555443 455 7999999999999999
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
...++..+++.|++|+++|++++++...+..+|.++|+++++++........ .....+|++.+.+.
T Consensus 119 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~--------------~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 119 IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNT--------------PSEILGRIAPAGLV 184 (1146)
T ss_pred hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------ccccccchHHHHHH
Confidence 9999999999999999999999999999999999999999999875421000 00011244444443
Q ss_pred h-HHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHH
Q 046667 223 A-LPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGT 301 (540)
Q Consensus 223 ~-~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
. ...++.++..+.+||+|+.. ..+..++..... ....+ .....++++ .++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------------~~~~~------~~~~l~~~~-------~~~~~ 237 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAA--PEVFDKKKYLFP------------KLLWR------NLKLLRSDR-------VLWLA 237 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCC--cccccccccccH------------HHHHH------HHHHHhcCc-------HHHHH
Confidence 3 33334444456678876541 110000000000 00000 000111111 11111
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHH-hcCCCc-ccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHH
Q 046667 302 TSTWFLLDIAFYSQNLFQKDIFSA-VGWIPS-AKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMG 379 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~ 379 (540)
.+..++.....+....+.+.++.+ .|+++. . .........++.+++.++.+++.||+++++.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~ 305 (1146)
T PRK08633 238 IIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQ------------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLG 305 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHH
Confidence 222222222233333445555543 455443 2 22355666778888999999999999998888777
Q ss_pred HHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 046667 380 FFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFG 459 (540)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 459 (540)
.++.+++.+++.... + ....++..++.+++.....+...+++.+..|++.||+++|+.+++..++.++++.+
T Consensus 306 ~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 306 ALGLALSLFLLPTAP-------S-LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLAL 377 (1146)
T ss_pred HHHHHHHHHHHHHhh-------h-HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHH
Confidence 777766666555432 1 22222333333333333345566788899999999999999999999999888887
Q ss_pred HHHHh
Q 046667 460 FLYLA 464 (540)
Q Consensus 460 ~~~~~ 464 (540)
.+.+.
T Consensus 378 ~~~l~ 382 (1146)
T PRK08633 378 TTLFS 382 (1146)
T ss_pred HHHHH
Confidence 77665
No 82
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=8.9e-27 Score=208.20 Aligned_cols=349 Identities=14% Similarity=0.089 Sum_probs=207.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+....|.+.|+|.+...+.++.+|.++||+|||+++++|++..++...+.+.+.| |..+++.|++.|+..|
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~------F~afv~aR~l~Gi~kg- 136 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN------FAAFVLARFLGGIFKG- 136 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHhhhhccC-
Confidence 356778999999999999999999999999999999999999999999999999999 8777777999999855
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
...+..++++|.+++|+|++.++.++...++|.++||.+|+++..+... ...+..-.+-++..
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-----------------~g~~p~alP~~~v~ 199 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-----------------SGSYPFALPCLLVF 199 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-----------------hccCchHHHHHHHH
Confidence 5788999999999999999999999999999999999999999862211 01111222223333
Q ss_pred HHHHH-HHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHH
Q 046667 224 LPAAL-TYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTT 302 (540)
Q Consensus 224 ~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (540)
+++.. .....+++||+-+. .+++ +......+..+.+ .+..+.+ ........+++..+..........
T Consensus 200 i~a~~~v~~~~~~lpETL~~--rk~~---~~~~~~~~~~~~~--~~~~~~~-----~~~~v~~lrn~p~~~~i~~~~i~~ 267 (451)
T KOG2615|consen 200 ILAAGDVTFFPWFLPETLPL--RKRN---DEHSTLQEAADDR--LALLKFA-----RIFKVAALRNPPLLDFISVLRIFG 267 (451)
T ss_pred HHHHHHHHHHHHhCCccccc--hhhc---ccccchhhhhhhh--hhhcchh-----hhhhhhhhcCccccchHHHHHHHH
Confidence 33333 34445789998442 1111 1111111111100 0000000 000011112221111111111122
Q ss_pred HHHHHHHHHHHHHhhhHHHH-HHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcc--chhHHHHH
Q 046667 303 STWFLLDIAFYSQNLFQKDI-FSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIG--RFAIQMMG 379 (540)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~r~~~~~~ 379 (540)
...+.....+.....+.+.+ .+..|+.+.+.+. +....++.+.+......+..+|.+ .+-.+...
T Consensus 268 l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~------------vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~ 335 (451)
T KOG2615|consen 268 LHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK------------VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFS 335 (451)
T ss_pred HHHHHHHHHHHHHHhhHHHhhcCccCCChhhhee------------eeehhhHHHHHHHHhccccccccccchhhHHHHH
Confidence 22233323333333333322 1346777766444 333333333332223333334433 22233333
Q ss_pred HHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 046667 380 FFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFG 459 (540)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 459 (540)
..++.-..+++.... ....+........+......+....++....|+++||+++|+....+.++.++||.+
T Consensus 336 l~~~vP~~llls~~~--------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv 407 (451)
T KOG2615|consen 336 LLLIVPAFLLLSLAR--------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLV 407 (451)
T ss_pred HHHHHHHHHHHhccc--------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhh
Confidence 332222222222222 122233333333344444445666778899999999999999999999999999999
Q ss_pred HHHHhhccc
Q 046667 460 FLYLAQSKD 468 (540)
Q Consensus 460 ~~~~~~~~~ 468 (540)
.|.+..+..
T Consensus 408 ~g~i~~Ws~ 416 (451)
T KOG2615|consen 408 SGVIFSWSQ 416 (451)
T ss_pred hheeEEEec
Confidence 999987654
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=9.9e-25 Score=212.49 Aligned_cols=357 Identities=11% Similarity=0.020 Sum_probs=230.0
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh----HHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK----KVYGMTLML 107 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr----~~~~~~~~~ 107 (540)
++......+.+.|.+|.+.+++ +.|.++.|++.+++.++..++++++|+++||+||| +.+.+...+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~----------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 82 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQ----------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL 82 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhc----------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH
Confidence 4555566677888999888888 89999999999999999999999999999999984 333322222
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
. ........++ ++.+++.|++.|++.+...+...+++.++ +++|+++.+......++|.++||++++++.
T Consensus 83 ~--~~~~~~~~~~------~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 83 F--AVAFWFGAHS------FWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred H--HHHHHHhccc------HHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 2 2223333455 78999999999999898999888888877 356788888889999999999999999996
Q ss_pred HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchh
Q 046667 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEA 267 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (540)
+. +|||..|++.++..++..+..++.||+++. . ++++.
T Consensus 153 ~~-----------------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~-------------- 190 (382)
T PRK11128 153 SW-----------------------FGEQAILWILTAGVASMLLGQLLRPTIMPQ--G---ESRQQ-------------- 190 (382)
T ss_pred HH-----------------------cChhHHHHHHHHHHHHHHHHHHccCCCCCc--c---ccccc--------------
Confidence 54 359999988776555444444445553221 0 00000
Q ss_pred hHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHH
Q 046667 268 EEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARA 347 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (540)
.++...+..+.++++ .++......++....+.....+.+.+.++.|+++... +.
T Consensus 191 -------~~~~~~~~~~i~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~-----------g~- 244 (382)
T PRK11128 191 -------ESAGWPAWKALLKEP-------TVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTI-----------GY- 244 (382)
T ss_pred -------cccccchHHHHHcCh-------hHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHH-----------HH-
Confidence 000000111122222 2222223233333334444455566666666654432 22
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++.++..++.+++.||+++|+.+..+.+..++..+.+.... +.+ ...+..+..++......+....
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~l~g~~~~~~~~~~~~ 316 (382)
T PRK11128 245 LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT-------ALP-WLIVIQILHCGTFTVCHLAAMR 316 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh-------hHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33355567788888999999999999998888887777666554332 223 2233333333322223344555
Q ss_pred eecccCchhhhhhhhHHHHHH-HHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 046667 428 VPAEIFPARLRSTCHGISAAS-GKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLF 499 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 499 (540)
+..+. +++.+++..++.+.. ..+|..++|.+.|.+.| ..|+ ..++..+++.+++.+.
T Consensus 317 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~-------------~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 317 YIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ-------------HLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccH-HHHHHHHHHHHHHHHH
Confidence 66665 555678888888644 46677999999999995 4454 4566666665554433
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=3.9e-25 Score=245.08 Aligned_cols=380 Identities=13% Similarity=0.032 Sum_probs=240.6
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHH-hhhhhhcccCCCCCCCCC-ChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTK-LLGRIYYHVDGAEKPGSL-PPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG 102 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~ 102 (540)
++...++.+.+++....+..... .+..+. +. +....++..+++.+.+.++++++|+++||+|||+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~ 86 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGAL----------GAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAK 86 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhcccc----------ccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHH
Confidence 33444555555555544443333 333222 22 2356788899999999999999999999999999753
Q ss_pred H---HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 103 M---TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 103 ~---~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
. ..++..+..+.+...++ ++.++++|+++|++.+...|+..+++.+++|+++|++++++.+++.++|.++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~s------~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ig 160 (1140)
T PRK06814 87 ILKFAEIGIAALAIYGFHLNS------VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLG 160 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHH
Confidence 3 22233333333334456 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHH-HHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAK-QAASDMS 258 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~-~~~~~~~ 258 (540)
+++++++... .+|++.|+..++..++.+++.+++|+++.. ..+.+.+ ...+...
T Consensus 161 p~l~g~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 215 (1140)
T PRK06814 161 TIIGGLATIS-----------------------GNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKIDRNIIRSTI 215 (1140)
T ss_pred HHHHHHHHhc-----------------------cccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeeccchHHHHH
Confidence 9999999653 349999966666666666666667765432 0000000 0000000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (540)
..++..... +.++...+..+...+.......+.|.++.+ .|..+..
T Consensus 216 -------------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~----- 262 (1140)
T PRK06814 216 -------------------------TLLKYAKAD---KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV----- 262 (1140)
T ss_pred -------------------------HHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH-----
Confidence 000111001 122333333333333444555567777665 4544433
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc--c-----------ccCCchh
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDH--W-----------THKSNRL 404 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~ 404 (540)
.........++.+++.++.+++.++..+++.+..+.++.+++.+.+.+.... . ....+.+
T Consensus 263 -------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 263 -------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 3336677778889999999999988877666655555555544433332000 0 0001222
Q ss_pred HHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhh
Q 046667 405 GFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKN 484 (540)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 484 (540)
. +.+..++.+++.....+...+++.+..|++.+|+++|+.+++..++..+++.+.+.+.+ ...++..
T Consensus 336 ~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~------------~~~~~~~ 402 (1140)
T PRK06814 336 R-ILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA------------LGFSIPW 402 (1140)
T ss_pred H-HHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH------------hccCHHH
Confidence 2 22333333344444445567888999999999999999999999999999999999874 2345666
Q ss_pred HHHHHHHHHHHHHH
Q 046667 485 SLIVLGVVNLLGLL 498 (540)
Q Consensus 485 ~~~~~~~~~~~~~~ 498 (540)
.+++.+++.++..+
T Consensus 403 ~~~~~~~~~~~~~~ 416 (1140)
T PRK06814 403 IILFIALANLIVAI 416 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555554444433
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.4e-24 Score=213.93 Aligned_cols=422 Identities=9% Similarity=0.028 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHHHhHhHH-HHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh-cchhHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCI-SLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYG 102 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~ 102 (540)
+..+++..+...+..... ......+.+++ +.+.++.+++.+.+.....+..+++|+++|| +||||+++
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~l----------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~ 85 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQL----------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV 85 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH
Confidence 333333334444444333 34455667777 8999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcc--cchhHHHHHHHHHHHHHHHHH
Q 046667 103 MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGG 180 (540)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~ 180 (540)
++.+++++++++++++.+. ...++++|+++|+|.|...+...+++.|++|++ +|+++.++++.+.++|..+||
T Consensus 86 ~g~~~~~~g~~~~~~~~~~-----~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~ 160 (489)
T PRK10207 86 LGAIVLAIGYFMTGMSLLK-----PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISL 160 (489)
T ss_pred HHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHH
Confidence 9999999999999998763 234568999999999999999999999999877 457799999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhh-ccHHHHHHHHHH
Q 046667 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVA-KNAKQAASDMSK 259 (540)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~-~~~~~~~~~~~~ 259 (540)
.+++++.+. .|||+.|++.++..++.++.....++..+....++ +++.+......-
T Consensus 161 ~l~g~l~~~-----------------------~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~ 217 (489)
T PRK10207 161 SLAPVIADK-----------------------FGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLV 217 (489)
T ss_pred HHHHHHHHh-----------------------hChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHH
Confidence 999999643 45999999965544444433333332211100000 000010000000
Q ss_pred -------HHh----hhchhhHhhh-hh---------hhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 046667 260 -------VLQ----VELEAEEQKI-QE---------LDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLF 318 (540)
Q Consensus 260 -------~~~----~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (540)
... .+........ .. ..++. +..+.+|++.. ....+..........+......
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~-~~~~~~r~r~~-----~~~~l~~~~~~f~~~~~q~~~~ 291 (489)
T PRK10207 218 LLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAF-KLDKTGRNKMF-----VAFVLMLEAVVFYILYAQMPTS 291 (489)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHcccH
Confidence 000 0000000000 00 00000 00122222211 1111111112222223333334
Q ss_pred HHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhH-------HHHHHHHHHHHHHHH
Q 046667 319 QKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAI-------QMMGFFFMTVFMFAL 390 (540)
Q Consensus 319 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~-------~~~~~~~~~~~~~~~ 390 (540)
.+.+.++ .+. ...+.... .+. ......+..++..++.+++.||+++|+. +.+++++.+++++.+
T Consensus 292 l~l~~~~~~~~--~~~G~~i~-----~~~-~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~ 363 (489)
T PRK10207 292 LNFFAINNVHH--EILGFSIN-----PVS-FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTA 363 (489)
T ss_pred HHHHHHHhccc--cccceEEC-----HHH-HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 4444432 111 11111000 011 2222333445566677899999998863 666777766666543
Q ss_pred Hhccc-cc-ccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 391 AIPYD-HW-THKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 391 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
..... .. .....+.++++...+..+.+.....+...+++.+..|++.++.++|+.+...++|+.++..+........+
T Consensus 364 ~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~ 443 (489)
T PRK10207 364 AAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDN 443 (489)
T ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21110 00 11112233444555556666777778888899999999999999999999999999999888765531110
Q ss_pred cccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 469 KTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
. .++.. ..-.+...|...++.++++.+..+
T Consensus 444 -~-~~~~~-~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 444 -I-TDPLE-TLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred -c-ccchh-hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 011245667666666666555555
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=3.2e-25 Score=208.63 Aligned_cols=355 Identities=10% Similarity=0.046 Sum_probs=217.8
Q ss_pred hHhHHHHHHHhhhhhhcccCCCCCCCCCChhh-hhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhh
Q 046667 38 DLFCISLVTKLLGRIYYHVDGAEKPGSLPPNV-SAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASG 116 (540)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~ 116 (540)
-+...+.+.|.+.+++ |+|..+ .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.+
T Consensus 41 ~R~n~s~a~p~L~~el----------glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~ 110 (511)
T TIGR00806 41 FRPGESFITPYLLTVL----------NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLL 110 (511)
T ss_pred hhchHHHHHHHHHHHc----------CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 3678889999999999 999999 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 046667 117 LSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKA 196 (540)
Q Consensus 117 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 196 (540)
++++ +..+.+.|++.|+++|+.. +...++..|+|+++|+++.++..++..+|.++++++++++.
T Consensus 111 fa~S------l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~--------- 174 (511)
T TIGR00806 111 LGTS------VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV--------- 174 (511)
T ss_pred HHHH------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 9988 8999999999999999999 99999999999999999999999999999999999999843
Q ss_pred CCCCCCCccccCCCCCcchHHHHHh---hhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhh
Q 046667 197 PAYEDDPIASTAPQADYLWRIIVMV---GALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQ 273 (540)
Q Consensus 197 ~~~~~~~~~~~~~~~~~gwr~~f~~---~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (540)
..|||+.+.+ ......+++++.+++|..++.+-.++++..+ .....+ .+...+++..+..
T Consensus 175 ---------------s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~ 237 (511)
T TIGR00806 175 ---------------TLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVR-GALPCE-LDQMVPGPGGKLE 237 (511)
T ss_pred ---------------hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccc-cccccc-cccCCCCCccccc
Confidence 2348766554 3333445566678888555532112111100 000000 0000000000000
Q ss_pred h-hhcccCCc-cchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCc-ccchhhHHHHHHHHHHHHH
Q 046667 274 E-LDRDKGNG-YGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPS-AKTMNAIQEVYKIARAQTL 350 (540)
Q Consensus 274 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 350 (540)
+ .+....+. ..+..+-..--..+.++.-.+-|.+...+++-...|...+.++..-..+ +.|. .-.
T Consensus 238 ~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~------------veA 305 (511)
T TIGR00806 238 DYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGA------------VDA 305 (511)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCH------------HHH
Confidence 0 00000000 0111111100011223334445556667777777788777776422111 2111 222
Q ss_pred HHHhhhhhhHHHHHHHHhhccchhHHHHHHH--HHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeee
Q 046667 351 IALCSTVPGYWFTVAFIDKIGRFAIQMMGFF--FMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVV 428 (540)
Q Consensus 351 ~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (540)
+..+.+.+..+..|++-.+..+...+.++.+ +.+.+++++.... +.|.....+.++...+.+. .++...-
T Consensus 306 ~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~-------~Iw~~Y~~yvlf~~~y~fl-itia~~~ 377 (511)
T TIGR00806 306 ASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSH-------DIWVLYVTYVLFRGIYQFL-VPIATFQ 377 (511)
T ss_pred HHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhccc-------chHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3333344456677777555533223333322 2222222222222 3444444444444444332 2444444
Q ss_pred ecccCchhhhhhhhHHHHHHHHHhHHH
Q 046667 429 PAEIFPARLRSTCHGISAASGKLGAIV 455 (540)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~g~~i 455 (540)
+++....+.-|...|+.++..-+-..+
T Consensus 378 iA~~L~~~~~aLvFGiNtfvAl~LQti 404 (511)
T TIGR00806 378 IASSLSKELCALVFGINTFVATALKTI 404 (511)
T ss_pred HHHHhcccceEEEEecHHHHHHHHHHh
Confidence 555566666688888887765544433
No 87
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.1e-25 Score=229.51 Aligned_cols=404 Identities=14% Similarity=0.127 Sum_probs=257.8
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 26 IVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
+...+..+......+.++.+++.++++| +++.++.|++.+.+.++++++.++.|+++||+|||+++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F----------~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRF----------KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhh----------CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH
Confidence 4444567777778889999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCC----C------------C---------------------------c--chhhHHHHHHHHHHhhc
Q 046667 106 MLMVICSIASGLSFG----N------------S---------------------------P--KGVMATLCFFRFWLGFG 140 (540)
Q Consensus 106 ~~~~i~~~~~~~~~~----~------------~---------------------------~--~~~~~~l~~~r~l~G~~ 140 (540)
++++++++++++.+- | + . ...+..++++|+++|+|
T Consensus 106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG 185 (633)
T TIGR00805 106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG 185 (633)
T ss_pred HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence 999999999987630 0 0 0 01256788999999999
Q ss_pred cccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC--CCCCCCCccccCCCCCc--chH
Q 046667 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKA--PAYEDDPIASTAPQADY--LWR 216 (540)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~--gwr 216 (540)
.+..++...+++.|++|+++|+++++++..+..+|.++|+++++++.+...+.... +...++| ....+ +|+
T Consensus 186 ~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-----~dprWiGaWw 260 (633)
T TIGR00805 186 ATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-----TDPRWIGAWW 260 (633)
T ss_pred CCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-----CCccHHHHHH
Confidence 99999999999999999999999999999999999999999999988654321000 0000111 01122 388
Q ss_pred HHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhH
Q 046667 217 IIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGL 296 (540)
Q Consensus 217 ~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (540)
..|++.+++.++..+.++++|++.+.. ..+.+.++..+.. ....+ ++... +......+..+....-.+.+
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p~~lp~~-~~~~~~~~~~~~~--~~~~~-~~~~~------~~~~~~~~~~~~~~~Ll~n~ 330 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFPKALPKE-GKRVNVDVHETEK--LEKSE-DKSRK------KNSDITKDFPKIIKRLLCNP 330 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCCc-ccccchhhhhhhc--ccccc-cccch------hhhhhHHHHHHHHHHHHcCc
Confidence 889887777776655556666543210 0000000000000 00000 00000 00000001011100001112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc--h
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR--F 373 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~--r 373 (540)
.++...+..++....+++...+.|.++++ .|+++.. .+.+.......+.+++.+++|+++||+++ |
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~-----------ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~ 399 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAE-----------ANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVK 399 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-----------HHHHhhhhhhhHHHHHHhhhhheeeeecccHH
Confidence 44555566666667788888899999875 5655444 22222222333557888999999999984 4
Q ss_pred hHHHHHHHHHHHHHHHHHh---c----------------------------------cc-c-------------------
Q 046667 374 AIQMMGFFFMTVFMFALAI---P----------------------------------YD-H------------------- 396 (540)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~---~----------------------------------~~-~------------------- 396 (540)
+.+..+.++..+..+.... . .. +
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC 479 (633)
T TIGR00805 400 KAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGC 479 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCC
Confidence 5555555555554333110 0 00 0
Q ss_pred -----------ccc--------C------------Cc-hhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHH
Q 046667 397 -----------WTH--------K------------SN-RLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGI 444 (540)
Q Consensus 397 -----------~~~--------~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 444 (540)
+.. . .. ...+++++.+...+......| ...++-..+|+++|..+.|+
T Consensus 480 ~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p-~~~i~lR~V~~~~rs~alg~ 558 (633)
T TIGR00805 480 SMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVP-LYMVLLRVVNPEEKSLAIGL 558 (633)
T ss_pred CCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCc-hheEEeeccCcccchHHhhH
Confidence 000 0 00 112222222333333333334 34566788999999999999
Q ss_pred HHHHHHH-hHHHHHHHHHHHhhc
Q 046667 445 SAASGKL-GAIVGAFGFLYLAQS 466 (540)
Q Consensus 445 ~~~~~~~-g~~i~~~i~~~~~~~ 466 (540)
...+.++ |.+-+|+++|.++|.
T Consensus 559 ~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 559 QWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHHHHHhcCCChhHHHhhhhhc
Confidence 9888775 889999999999985
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=9.2e-25 Score=211.06 Aligned_cols=341 Identities=11% Similarity=0.020 Sum_probs=225.1
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-----chhHH-HHHHHHHHHHHHH
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-----GRKKV-YGMTLMLMVICSI 113 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-----Grr~~-~~~~~~~~~i~~~ 113 (540)
...++.+|.+.+|+ ++|.++.|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++...
T Consensus 5 ~~~~~~~~~~~~~~----------g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~ 72 (356)
T TIGR00901 5 GLVGNTLPYWLRSK----------NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLL 72 (356)
T ss_pred hhHHhHHHHHHHHc----------CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHH
Confidence 45678899999999 9999999999766 455555 99999999998 89987 5677888888877
Q ss_pred HhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 046667 114 ASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAA 193 (540)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 193 (540)
+.++.++. ..++.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+....+.
T Consensus 73 ~l~~~~~~---~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~- 148 (356)
T TIGR00901 73 ILSFLVPS---TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA- 148 (356)
T ss_pred HHHcCCcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc-
Confidence 77777542 22567778888889988888999999999999999999999999999999999999999888654431
Q ss_pred cCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHH-hCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhh
Q 046667 194 FKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRM-KMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKI 272 (540)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (540)
+....++||..|++.++..++..+..+ ..||+++. .+.+ ++..++.. +
T Consensus 149 --------------~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~-~~~~~~~~-----------~-- 197 (356)
T TIGR00901 149 --------------NTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVP-KPLTQAVL-----------K-- 197 (356)
T ss_pred --------------ccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccc-hhHHHHHH-----------H--
Confidence 012356799999998887776655544 35664321 0000 00000000 0
Q ss_pred hhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHH
Q 046667 273 QELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIA 352 (540)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
...+.++++. .+..+......++....++....+.+.+..+.|+++.+ .+.......
T Consensus 198 --------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----------~g~~~~~~~ 254 (356)
T TIGR00901 198 --------PIREFFQRKN----MIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE-----------IALVAKING 254 (356)
T ss_pred --------HHHHHHHhcC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHHHhHHHH
Confidence 0001111111 11133333333444455666667777777766665544 222233344
Q ss_pred HhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc---CCchhHHHHHHHHHHHHhhcCCccceeeee
Q 046667 353 LCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTH---KSNRLGFVIIYSLTFFFANFGPNATTFVVP 429 (540)
Q Consensus 353 ~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (540)
.+..+++.++++++.||+|+|+.+..+.++.++...++.+....... .......+....+..++......+...++.
T Consensus 255 ~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 334 (356)
T TIGR00901 255 LLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFL 334 (356)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45667888999999999999998888777776665544432110000 001122233333333343344456778899
Q ss_pred cccCchhhhhhhhHHHHHHHH
Q 046667 430 AEIFPARLRSTCHGISAASGK 450 (540)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~ 450 (540)
.|.+|+++||+..|+.+...+
T Consensus 335 ~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 335 SKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999887654
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=1.3e-23 Score=208.93 Aligned_cols=407 Identities=10% Similarity=0.033 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhh-hhh--hcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh-cchhHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLL-GRI--YYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYG 102 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~ 102 (540)
.+.+..+...+......+.+|.. .++ + +++..+.+++.+.+.++..++++++|+++|| +|||+++.
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~l----------g~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGL----------GFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 33344555555555455555554 444 5 8999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCccc---chhHHHHHHHHHHHHHHHH
Q 046667 103 MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKT---RGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~~G~~~g 179 (540)
++.++.+++.++.+++++ ++.+++.|++.|++.|...+...++++|++|+++ |+++.++++.+.++|.++|
T Consensus 84 ~~~~~~~~g~~~~~~~~~------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIY------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHhccc------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 999999999999999887 6888899999999999999999999999998764 8889999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC----CChhhHHHhhccHHHHH-
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP----ETARYTALVAKNAKQAA- 254 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~----esp~~~~~~~~~~~~~~- 254 (540)
+++++++.+ ..|||+.|++.++..++..+..++.+ +.|+. .++.+.++..
T Consensus 158 ~~l~g~l~~-----------------------~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 212 (475)
T TIGR00924 158 PLLAGVIAE-----------------------NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSV--PDPLSGQGKTY 212 (475)
T ss_pred HHHHHHHHH-----------------------hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCC--CCCcchhhhhh
Confidence 999999853 34599999997765555444443333 22211 0000001000
Q ss_pred -HHHHH-------------HHhhhchhhH----------hhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHH
Q 046667 255 -SDMSK-------------VLQVELEAEE----------QKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDI 310 (540)
Q Consensus 255 -~~~~~-------------~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (540)
..... ........+. ....+...++ +. .... +++.+.++...........
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~-~~~~~~~l~l~~~~~~~~~ 286 (475)
T TIGR00924 213 GKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP-RL----DAVA-RNKMYAYIVLFLEAVVFWV 286 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc-cC----CHHH-HhHHHHHHHHHHHHHHHHH
Confidence 00000 0000000000 0000000000 00 0000 1111112222222222222
Q ss_pred HHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHH----HHHhh-ccchhHH--HHHHHH
Q 046667 311 AFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTV----AFIDK-IGRFAIQ--MMGFFF 382 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~d~-~g~r~~~--~~~~~~ 382 (540)
.+.......+.+.++ .+......... .+. ......+..++..++.. ++.|| .+.+... .++.++
T Consensus 287 ~~~Q~~s~l~l~~~~~~~~~~~~~~ip-------~~~-~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l 358 (475)
T TIGR00924 287 LYAQMPTSLNFFADNNMHHEMLGMSVP-------VIW-FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLF 358 (475)
T ss_pred HHHHhhhHHHHHHHHhccccccceEEC-------HHH-HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 222222323333322 11111111100 111 22223333333333333 34443 2223333 567777
Q ss_pred HHHHHHHHHhcccccc-cCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHH
Q 046667 383 MTVFMFALAIPYDHWT-HKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFL 461 (540)
Q Consensus 383 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~ 461 (540)
.++++..+.+...... ....+.++.+...++.+.+.....|...+++.+..|++.||+++|+......+|..+++.+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 359 CGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666654211111 112344555666666677788888999999999999999999999999999999999988887
Q ss_pred HHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 462 YLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
...+ ..++...|...++++++..+..+
T Consensus 439 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 439 FGAV-------------PQGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHhc-------------ccchhhHHHHHHHHHHHHHHHHH
Confidence 7653 33566666666666665555554
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=1.3e-24 Score=216.48 Aligned_cols=349 Identities=15% Similarity=0.097 Sum_probs=226.0
Q ss_pred HHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh----cchhH-HHHHHHHHHHHHHHHhhcc
Q 046667 44 LVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK----LGRKK-VYGMTLMLMVICSIASGLS 118 (540)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr----~Grr~-~~~~~~~~~~i~~~~~~~~ 118 (540)
...+.+.+++ ++++.+.|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.
T Consensus 21 ~l~~~~~~~~----------g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~ 90 (437)
T TIGR00792 21 YLLFFYTDVL----------GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT 90 (437)
T ss_pred HHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC
Confidence 3555667777 8999999999999999999999999999997 68755 5777888888888888777
Q ss_pred CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 046667 119 FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAP 197 (540)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~ 197 (540)
++......+..+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+....+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~----- 165 (437)
T TIGR00792 91 PDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG----- 165 (437)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 65322223567788889999988888888888999987 478999999999999999998888877776644331
Q ss_pred CCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhh
Q 046667 198 AYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELD 276 (540)
Q Consensus 198 ~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (540)
..+..+||+.+++.++++++..+. .++.+|+++.. . .+ ++
T Consensus 166 -----------~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~--~-~~-~~------------------------ 206 (437)
T TIGR00792 166 -----------GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI--P-KN-IE------------------------ 206 (437)
T ss_pred -----------CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC--C-cc-cc------------------------
Confidence 022467999999888777665544 45567654210 0 00 00
Q ss_pred cccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhh
Q 046667 277 RDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
++.+..+.++.....+ .++......++.....+....+.+.+.+. .... ....+ .......++.
T Consensus 207 -~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~-~~~~~~~i~~ 270 (437)
T TIGR00792 207 -KKLSLKQIFKALFKND---QLLILCLAYLFYNLAFNIKNGVQVYYFTY-VLGD----------PELFS-YMGSIAIVAG 270 (437)
T ss_pred -cCCCHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHcchhheeEee-ecCC----------hHHHH-HHHHHHHHHH
Confidence 0000011111111111 12222222222223333322222222221 1110 01112 2334456777
Q ss_pred hhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCc--
Q 046667 357 VPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFP-- 434 (540)
Q Consensus 357 ~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-- 434 (540)
+++.++.+++.||+|+|+.+..+..+.+++.+.+.+.. .+ .....+..+..+++.....+..+++.+|..+
T Consensus 271 ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (437)
T TIGR00792 271 LIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG------SN-LPLILVLIILAGFGQNFVTGLVWALVADTVDYG 343 (437)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc------hh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 88889999999999999998888877776665554422 11 2222223233333333334566777777754
Q ss_pred -----hhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 046667 435 -----ARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDK 469 (540)
Q Consensus 435 -----~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~ 469 (540)
++.+|.+.|+.+....+|..+++.+.|.+.+..|.
T Consensus 344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999987664
No 91
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.4e-26 Score=222.46 Aligned_cols=410 Identities=13% Similarity=0.105 Sum_probs=290.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
..-+-|.+++...+..+...-....++...+.+++++ +.+.++.+|+.++......+.+|+.+.+.||+|
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f----------~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg 109 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYF----------GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG 109 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHh----------CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC
Confidence 4445677777777776555555566678889999999 889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCcchhhHH-HHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFGNSPKGVMAT-LCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
.|.+.+.|.++.+++.++.+++++ +|. ++..-++.|+|.|..+......+..+|+ |+|+.+.|+..++.++|
T Consensus 110 ~R~v~i~G~~v~~~g~~lssF~~~------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G 182 (509)
T KOG2504|consen 110 CRTVMIAGGLVAALGLLLSSFATS------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVG 182 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcc
Confidence 999999999999999999999999 555 4557799999999999999999998886 67999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHh-CCCChhhHHHhhccHHHHH
Q 046667 176 ILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMK-MPETARYTALVAKNAKQAA 254 (540)
Q Consensus 176 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~esp~~~~~~~~~~~~~~ 254 (540)
.++-|.+...+.+. .|||+.+++.+.+.+-.++.... -|.+++. .++ .++..
T Consensus 183 ~~~~~~l~~~l~~~-----------------------~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~--~~~--~~~~~ 235 (509)
T KOG2504|consen 183 TVVFPPLLKYLLSK-----------------------YGWRGALLIFGGISLNVLVAGALLRPLSPPK--KPN--EEKDL 235 (509)
T ss_pred eeeHHHHHHHHHHH-----------------------hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCC--Cch--hhhhh
Confidence 99999888888654 45999999877666555444433 3433322 111 00000
Q ss_pred HHHHHHHh-----------h-h--chh----hHhhhhhhhcccC--Cccchh---hHHHhhhhhHHHHHHHHHHHHHHHH
Q 046667 255 SDMSKVLQ-----------V-E--LEA----EEQKIQELDRDKG--NGYGLF---SKEFLRRHGLHLLGTTSTWFLLDIA 311 (540)
Q Consensus 255 ~~~~~~~~-----------~-~--~~~----~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (540)
+...+..+ . + ..+ +....++..++.. .....+ ....++. +.++.......+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~--~~fl~~~~~~~~~~~g 313 (509)
T KOG2504|consen 236 RNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD--PKFLLLALSNLFAYLG 313 (509)
T ss_pred ccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC--chHHHHHHHHHHHHHH
Confidence 00000000 0 0 000 0000000000000 111111 1222222 3445555556666677
Q ss_pred HHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc--hhHHHHHHHHHHHHHHH
Q 046667 312 FYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR--FAIQMMGFFFMTVFMFA 389 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~--r~~~~~~~~~~~~~~~~ 389 (540)
++...++++.+..+.+....+ +.......++..++++++.|++.|+... +....++.++.++..+.
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~------------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSND------------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhh------------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 888888899998887777665 3337777888999999999999999884 44445555555555544
Q ss_pred HHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 046667 390 LAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDK 469 (540)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~ 469 (540)
+.... .+..++.+.+..++...........++.|+.+.+.-..+.|+...+..++..++|.+.|++.|.++
T Consensus 382 ~p~~~--------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg- 452 (509)
T KOG2504|consen 382 LPFAT--------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG- 452 (509)
T ss_pred HHHhc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-
Confidence 44433 234445555555554444445555678899999999999999999999999999999999987544
Q ss_pred ccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 470 TKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 470 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
+|...|+.++++.+++.++++..+
T Consensus 453 -----------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 -----------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred -----------CeeeehhhcChHHHHHHHHHHHhH
Confidence 488999999999999988877665
No 92
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=2.7e-24 Score=210.71 Aligned_cols=381 Identities=14% Similarity=0.061 Sum_probs=230.2
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhh-hhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLL-GRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTL 105 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~ 105 (540)
.+...+++.........+.+|.. .+++ +.+..+.|++.+++.++..+++++.|+++||+|||+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~ 75 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVN----------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII 75 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 33444555566666666777654 5567 899999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHh---hccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH
Q 046667 106 MLMVICSIAS---GLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF 182 (540)
Q Consensus 106 ~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 182 (540)
...+++.... .+.+.. ....+..+++.|++.|++.+...+....+..|..+ ++++..+......++|.++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLL-QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHH
Confidence 7665544332 121110 00013456777899999988888888888877543 34556777778889999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHh-CCCChhhHHHhhccHHHHHHHHHHHH
Q 046667 183 ALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMK-MPETARYTALVAKNAKQAASDMSKVL 261 (540)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (540)
++.+. +.+||.+|++.++..++..+..+. .||+|+.. .+ +++.
T Consensus 153 ~g~l~------------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~------- 196 (396)
T TIGR00882 153 AGILF------------------------SIDPQIVFWLGSGFALILMLLLMFAKPKAPSSA--TV---ANAL------- 196 (396)
T ss_pred Hhhhh------------------------ccCchHHHHHHHHHHHHHHHHHHHhCCCCchhh--hh---hccc-------
Confidence 88774 245999999987777765544444 44443210 00 0000
Q ss_pred hhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHH
Q 046667 262 QVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEV 341 (540)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (540)
+.+ +..++.++..+.++++. ++......+.....+.....+.+.++.+....... + .
T Consensus 197 ~~~---------~~~~~~~~~~~~l~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~-~------~ 253 (396)
T TIGR00882 197 GAN---------ASAFSLKLALELFRQRK-------FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQ-G------T 253 (396)
T ss_pred ccc---------cCCCCHHHHHHHHcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-c------h
Confidence 000 00000001111222211 11122222222222333333444454442211100 0 0
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGP 421 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (540)
. ..........+...++.+..+++.||+|+|+.+.++..+.++...+..... +.+.. ....+..+......
T Consensus 254 ~-~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~-------~~~~~-~~~~~l~g~~~~~~ 324 (396)
T TIGR00882 254 R-VFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT-------TALEV-VILKMLHAFEVPFL 324 (396)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC-------ChHHH-HHHHHHHHHHHHHH
Confidence 0 112234445566677778899999999999998888877777665544322 22222 22222222222111
Q ss_pred ccceeeeecccCchhhhhhhhHH-HHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 422 NATTFVVPAEIFPARLRSTCHGI-SAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
......+..+..|++.++++.+. .+....+|+++++.+.|++.| ..||+.+|.+.+++.++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~-------------~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 325 LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD-------------SIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH-------------hcccHHHHHHHHHHHHHHHHHH
Confidence 12233455666778888887776 578889999999999999994 5688899988888877766554
Q ss_pred H
Q 046667 501 F 501 (540)
Q Consensus 501 ~ 501 (540)
.
T Consensus 392 ~ 392 (396)
T TIGR00882 392 V 392 (396)
T ss_pred H
Confidence 3
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.4e-23 Score=186.05 Aligned_cols=370 Identities=14% Similarity=0.122 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH
Q 046667 22 FTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY 101 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~ 101 (540)
+..+..+.+..+.-=-..+.++|+++++.+++ ++|.+..|++++...+...+.+++..++++|+|.++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~----------gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l 80 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDL----------GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL 80 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHh----------cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH
Confidence 34443343444433445577899999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (540)
..++++..++.++-... + .+.++.+-.+.|.|.+......+.++.+.||+ +-+..++++....++|..+++.
T Consensus 81 ~~~Llli~~G~~iR~~~-~------~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~ 152 (395)
T COG2807 81 FLALLLIAAGILIRSLG-G------LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAA 152 (395)
T ss_pred HHHHHHHHHHHHHHhcc-c------HHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhh
Confidence 99999999999998887 4 48999999999999999999999999999985 5799999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHH
Q 046667 182 FALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVL 261 (540)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (540)
+...+.... .|||....+-++++++.++.++ |...|.. .
T Consensus 153 lavpla~~~----------------------~gW~~aL~~WAl~allAl~~Wl--Pq~~r~~-----~------------ 191 (395)
T COG2807 153 LAVPLAQHS----------------------GGWRGALGFWALLALLALLIWL--PQALREQ-----A------------ 191 (395)
T ss_pred hhhHHHHhh----------------------ccHHHHHHHHHHHHHHHHHHHh--hhccccc-----c------------
Confidence 998886443 3599999999888888777653 3322110 0
Q ss_pred hhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHH
Q 046667 262 QVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEV 341 (540)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (540)
........+..++++++ ..|.+.+.+..++..+|....|+|.++.+.|+++.+.+.
T Consensus 192 -----------~~~~~~~~~~~~vw~~~-------~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~------ 247 (395)
T COG2807 192 -----------ASIATKLVSVRKVWRSP-------LAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGS------ 247 (395)
T ss_pred -----------cccccccccccccccCc-------hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhh------
Confidence 00000011112233332 456677778888999999999999999999998887443
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcC
Q 046667 342 YKIARAQTLIALCSTVPGYWFTVAFIDKIG-RFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420 (540)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (540)
......+..++.++....+.+|.. +|+.......++.++.+.+.+... +..+.+ .+..+++..+
T Consensus 248 ------llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~-----~~~~lw----~~llG~G~G~ 312 (395)
T COG2807 248 ------LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG-----QLPILW----ALLLGLGQGG 312 (395)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----hHHHHH----HHHHhCccch
Confidence 666677788888899999999765 555666666666666666654431 112222 2334444444
Q ss_pred Cccceeeeeccc-CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 046667 421 PNATTFVVPAEI-FPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLF 499 (540)
Q Consensus 421 ~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 499 (540)
.+|+....+.+. -.++..+.-.|+.+.++++-+.+||.++|++.|.+| +|...+.......++..+.
T Consensus 313 ~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g------------sw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 313 AFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG------------SWSAPLVLLALATLLMLIF 380 (395)
T ss_pred HHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC------------ChHHHHHHHHHHHHHHHHH
Confidence 455555555544 346778888999999999999999999999998766 7877777766666655554
Q ss_pred HH
Q 046667 500 TF 501 (540)
Q Consensus 500 ~~ 501 (540)
-+
T Consensus 381 Gl 382 (395)
T COG2807 381 GL 382 (395)
T ss_pred Hh
Confidence 44
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.1e-23 Score=186.49 Aligned_cols=385 Identities=13% Similarity=0.045 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH
Q 046667 23 TAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG 102 (540)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~ 102 (540)
..++.+....++.++......+.+|.+++.| +++..|.+.+..+++.|+.+++++.|++.+|+|+|+.++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f----------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~ 82 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVF----------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIV 82 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHh----------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHH
Confidence 4555666667888888888999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH
Q 046667 103 MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF 182 (540)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 182 (540)
.++.++++++.+..-+.+. ..+..++++-|+.|.|.+...+.+..+++...++++..+.+++.+...++|.+++|++
T Consensus 83 lgL~l~avg~~lF~pAa~~---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 83 LGLLLYAVGAALFWPAASS---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred HHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHH
Confidence 9999999999998643332 2278999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCccc--cCCCCCcchHHHHHhhhHHHHHHHHHHHh--CCCChhhHHHhhccHHHHHHHHH
Q 046667 183 ALIVSSAFNAAFKAPAYEDDPIAS--TAPQADYLWRIIVMVGALPAALTYYWRMK--MPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~gwr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
+..+...-.. ...++.+. ........||++|...+...++..+.... .||.++.. .++
T Consensus 160 g~~lils~~~------~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~--~~~---------- 221 (422)
T COG0738 160 GSSLILSGVA------LTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA--PSL---------- 221 (422)
T ss_pred HHHHHHhhhh------hccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc--ccc----------
Confidence 9988752100 00000000 00011223888888866665555444433 33322210 000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (540)
.+..+....+.++++. +..-.+..+++.........|.+.++.+ .|.+..
T Consensus 222 ----------------~~~~~~~~~~l~~~~~-------~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~------ 272 (422)
T COG0738 222 ----------------GASGSAGLSSLFQNKH-------LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ------ 272 (422)
T ss_pred ----------------cccccchHHHHHhChH-------HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH------
Confidence 0000001122223332 2223444455545555666677777776 333332
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHh
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFA 417 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (540)
.+.........+.++|++++.++..|+...+.+.....+..+.++...+... . ..+...+..+++
T Consensus 273 ------~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g--------~-v~~~~l~~ig~F 337 (422)
T COG0738 273 ------QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG--------V-VALYALFLIGLF 337 (422)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC--------h-HHHHHHHHHHHH
Confidence 2444677777888999999999999999988888777666666666665542 2 222333334455
Q ss_pred hcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 046667 418 NFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497 (540)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (540)
....+|..++...+..| ++.. ..|......-+|+++.|.+.|++.| ..|....+.....+|.+..
T Consensus 338 ~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAiiP~l~G~i~d-------------~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 338 NSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAIIPPLQGVIAD-------------MFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred hHHHHHHHHHHHHhccC-cccc-ccceeeeeheecchHHHHHHHHHHH-------------hhhhHHHHHHHHHHHHHHH
Confidence 55567888888888888 3333 3444445567899999999999996 4455555554444444444
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=3.4e-25 Score=199.41 Aligned_cols=387 Identities=14% Similarity=0.060 Sum_probs=259.8
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcc-------------c---------------------------CCCCC
Q 046667 22 FTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYH-------------V---------------------------DGAEK 61 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~---------------------------~~~~~ 61 (540)
..++....++.+.+.+......|.+|....|.-+ . +.+..
T Consensus 20 ~lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~ 99 (464)
T KOG3764|consen 20 PLILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAI 99 (464)
T ss_pred ceEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhcc
Confidence 4555666677777777777777777765444432 0 01124
Q ss_pred CCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcc
Q 046667 62 PGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGI 141 (540)
Q Consensus 62 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (540)
+.+.+++++|++.++..+...+.+++.|.+.||+|+|..+++|++++..+++++++..+ ++++++.|.+||+|.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s------y~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS------YPMLFVARSLQGVGS 173 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch------hHHHHHHHHHhhhhH
Confidence 55677889999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred ccchhhHHHHHhhhcCcc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHH
Q 046667 142 GGDYPLSATIMSEYANKK-TRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVM 220 (540)
Q Consensus 142 g~~~~~~~~~i~e~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~ 220 (540)
+...++..++++|.+|++ +|++++|+...+.++|.++||++|+.+.+. .|.+.+|+
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-----------------------~Gk~aPFl 230 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-----------------------AGKSAPFL 230 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-----------------------cCCcCcHH
Confidence 999999999999999965 479999999999999999999999999544 45899999
Q ss_pred hhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHH
Q 046667 221 VGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG 300 (540)
Q Consensus 221 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
+.++.+++...+.+++-|+.+. .++ ...+....++++++++... .
T Consensus 231 VL~~v~Lld~~L~l~vi~p~~~---~~~--------------------------~~~~~~~~~~Ll~dP~I~~------~ 275 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLVIEPTEM---DPD--------------------------STEQGTPMWSLLMDPYILL------I 275 (464)
T ss_pred HHHHHHHHHHHHHHheeCcccc---Ccc--------------------------ccccCccHHHHHhCchHhh------h
Confidence 9999888877776665443221 000 0111223344445544321 1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCc-ccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcc--chhHHH
Q 046667 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPS-AKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIG--RFAIQM 377 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g--~r~~~~ 377 (540)
.....++....-+.-.++..-..+++. .+. +.+. ..+...+...++..+.+.+.||++ |.....
T Consensus 276 agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~------------~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~ 342 (464)
T KOG3764|consen 276 AGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGL------------AFLPASLSYAIGTNLFGKLADKYPHLRWLLSL 342 (464)
T ss_pred hcchhhccchHHHhCcccHHHHHHhcc-CCCcceee------------eecccccchhccCchHHHHHHhcCchhHHHHH
Confidence 122222211111111111111223333 333 3333 667777888899999999999999 433333
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh---hhhhhhHHHHHHHHHhHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAASGKLGAI 454 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~ 454 (540)
.+.+..+++.....+...+ ...+.......+.+........|.. .+..|.-..+ ..|.+.++......+|.+
T Consensus 343 ~gl~~~G~~~~~iP~~~~~----~~L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a 417 (464)
T KOG3764|consen 343 GGLATVGVSSGPIPFATSI----AQLWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYA 417 (464)
T ss_pred HHHHHHHHHhchhHhhhhH----HHHhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhh
Confidence 3434444333333333211 1122222222222323333333333 2333333333 668999999999999999
Q ss_pred HHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 455 VGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 455 i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
+||.+.|.+. ..+|+++...+.++..++..-.+.++
T Consensus 418 ~GP~~gg~iv-------------~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 418 IGPTFGGSLV-------------EAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred ccccccchhe-------------eehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 47788888888888887776655533
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=5e-22 Score=192.98 Aligned_cols=420 Identities=11% Similarity=0.019 Sum_probs=264.8
Q ss_pred HhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh----hcchhHHHHHH-HHHHHHH
Q 046667 37 YDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD----KLGRKKVYGMT-LMLMVIC 111 (540)
Q Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D----r~Grr~~~~~~-~~~~~i~ 111 (540)
+......+.++.+.+++ +.+..+.+++..+..+...+.+++.|+++| |+||||+++.+ .+...++
T Consensus 18 ~~~~l~~~~l~~yl~~l----------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 18 FGWALQLSLLTPYVQEL----------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 33444445555566777 899999999999999999999999999999 59999998774 6666667
Q ss_pred HHHhhccCCCC--------cc-h--hhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccc--hhHHHHHHHHHHHHHHH
Q 046667 112 SIASGLSFGNS--------PK-G--VMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR--GAFIAAVFAMQGFGILA 178 (540)
Q Consensus 112 ~~~~~~~~~~~--------~~-~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~~G~~~ 178 (540)
.++.+++++.. .. . ..+.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 67777765520 00 0 012233333444557777888999999999998865 57999999999999999
Q ss_pred HHHHHHHHH--HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHH
Q 046667 179 GGIFALIVS--SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAAS 255 (540)
Q Consensus 179 g~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~ 255 (540)
|+.+++... ..++..... .......+.|..|++.++..++..++ .+..+|.|... . ++.++ +
T Consensus 168 g~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~-~~~~~--~ 232 (477)
T TIGR01301 168 GYAAGAYSGLYKIFPFTKTE----------ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--S-DDFIN--S 232 (477)
T ss_pred HHHHHHHHhHHHhccccccc----------ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--c-ccchh--h
Confidence 999998752 221110000 00011235899999988877776555 46688865321 0 00000 0
Q ss_pred HHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccch
Q 046667 256 DMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTM 335 (540)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 335 (540)
+. ++. ++ .+......++++. .+...+.+..++...++.-+.++.+..|.+.+..+.-+.......
T Consensus 233 ~~--------~~~----~~-~~~~~~~~~i~~~--~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~ 297 (477)
T TIGR01301 233 EA--------APP----SK-HGEEAFFGELFGA--FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG 297 (477)
T ss_pred hc--------ccc----cc-cchhhhHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch
Confidence 00 000 00 0000011112221 222334455556666666566676777777666642222211111
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhccccc-------------ccCC
Q 046667 336 NAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR-FAIQMMGFFFMTVFMFALAIPYDHW-------------THKS 401 (540)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~-r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 401 (540)
..+++....+........+...+.+++..++.+|+|+ |+...++.++.++++....+..... ....
T Consensus 298 ~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~ 377 (477)
T TIGR01301 298 AKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPT 377 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcch
Confidence 2344444456666666666666777888999999985 6777888888887777766543100 0000
Q ss_pred chhHHHHHHHHHHHHhhcCCccceeeeecccCch--hhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCC
Q 046667 402 NRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA--RLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPG 479 (540)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~ 479 (540)
.......+.....++.......+.++++++..|+ +..|..+|+.|.+-.+..++..+..|.+.+..++
T Consensus 378 ~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~---------- 447 (477)
T TIGR01301 378 GIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG---------- 447 (477)
T ss_pred hhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC----------
Confidence 1123333444444455555567889999999884 4569999999999999999999988887766553
Q ss_pred cchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 480 IGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 480 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
+...++.+.++.++++.++.+ .+|+.+
T Consensus 448 -~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 448 -GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred -CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 335677888888888888887 667654
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=5.1e-22 Score=194.25 Aligned_cols=378 Identities=12% Similarity=0.082 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHH--HHHHHHHHHHhhhhh-hhhhhhcchhHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAV--NGVAFCGTLAGQLFF-GWLGDKLGRKKVY 101 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~~~~~i~~~~~-g~l~Dr~Grr~~~ 101 (540)
+..+...++.++...+...+.+|.+.++. +.+.+++|.+ .+.+.+...+.+++. ++..||+||||..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~----------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~ 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED----------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence 45566678899999999999999999998 9999999997 466788888888888 5579999999886
Q ss_pred HHHHHHH-HHHHHHhh-ccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLM-VICSIASG-LSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 102 ~~~~~~~-~i~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
++.+.+. ++.....+ +.... .....++..-++.++..+...+...++..|..++++++...+....+..+|.++|
T Consensus 73 i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g 149 (390)
T TIGR02718 73 VLPMQCLVSACLASLALVGPDV---AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGG 149 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHH
Confidence 5554332 22222222 21110 0023444555666667777778888888999988888888888888888999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSK 259 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (540)
+...+++.+. .|||..|++.++..++..+..++++|+++. .. +++++..+
T Consensus 150 ~~~~~~l~~~-----------------------~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~--~~-~~~~~~~~---- 199 (390)
T TIGR02718 150 GAGTLVLFGK-----------------------FGQRPAFLLVACVPLASLVCVLWLKDRAVA--SP-EAPLARRA---- 199 (390)
T ss_pred HHHHHHHHHH-----------------------hCHHHHHHHHHHHHHHHHHHHHHcCCCCcC--cc-ccchhhHH----
Confidence 8888887644 449999999887776655555455443221 00 00000000
Q ss_pred HHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHH
Q 046667 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQ 339 (540)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (540)
+..+.++++. .+......++..........+.+.++.+.|+++++
T Consensus 200 ---------------------~~~~~l~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~------- 244 (390)
T TIGR02718 200 ---------------------SLFRFFRRPL-------AWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEW------- 244 (390)
T ss_pred ---------------------HHHHHHcCcC-------HHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHH-------
Confidence 0011112211 11122222223233334444566677777776655
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhc
Q 046667 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANF 419 (540)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (540)
.+...........+++.++.+++.||+|+|+.+..+..+.++..+........+. ..... ......+...+...
T Consensus 245 ----ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~g 318 (390)
T TIGR02718 245 ----IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL-APGIA-VAWSCSAFGSLITG 318 (390)
T ss_pred ----HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc-CCcHH-HHHHHHHHHHHHHH
Confidence 2222333334466677889999999999999888776655333222221111010 01111 11111122111111
Q ss_pred CCccceeeeecccCch-hhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 046667 420 GPNATTFVVPAEIFPA-RLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLL 498 (540)
Q Consensus 420 ~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (540)
...+...+...+..++ +.+++.+++.+...++|..++|.+.|.+.| ..|++..|...+++.+++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~-------------~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD-------------RFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHccHHHHHHHHHHHHHHHH
Confidence 1223334444455555 889999999999999999999999999995 55778888887777766654
Q ss_pred H
Q 046667 499 F 499 (540)
Q Consensus 499 ~ 499 (540)
.
T Consensus 386 ~ 386 (390)
T TIGR02718 386 L 386 (390)
T ss_pred H
Confidence 4
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=4.2e-22 Score=197.33 Aligned_cols=425 Identities=13% Similarity=0.082 Sum_probs=247.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
..++|..+.+........+. ...++...+.+.+++ ++|.++.+++.++. ....+++++.|+++||+||
T Consensus 23 e~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~l----------gls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~ 90 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSF-MYAFNLISGAMQARY----------NLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP 90 (591)
T ss_pred ccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh----------CcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 34566666655555444443 345667888899999 99999999998874 4556788899999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHH
Q 046667 98 KKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (540)
Q Consensus 98 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~ 177 (540)
|+++.++.+++++++++++++.+..-..+++.+++.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|.+
T Consensus 91 R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 91 RPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999997210000127999999999999999999999999999997 7899999999999999997
Q ss_pred HH-HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCCh--hhHHHhh-ccHHH
Q 046667 178 AG-GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETA--RYTALVA-KNAKQ 252 (540)
Q Consensus 178 ~g-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp--~~~~~~~-~~~~~ 252 (540)
+. ++...++. .+|+..|++.++..++. ++...+++++| ++...++ .++++
T Consensus 170 I~~~l~~~l~~-------------------------~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~ 224 (591)
T PTZ00207 170 ILGSIQLAFFS-------------------------DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEE 224 (591)
T ss_pred HHHHHHHHHHH-------------------------HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHH
Confidence 64 44444442 12787777766655543 44444554443 3210110 01111
Q ss_pred HH-HHH-----------------------------------HH----------------H-----Hh----------hhc
Q 046667 253 AA-SDM-----------------------------------SK----------------V-----LQ----------VEL 265 (540)
Q Consensus 253 ~~-~~~-----------------------------------~~----------------~-----~~----------~~~ 265 (540)
.. +.. .+ . .. ...
T Consensus 225 ~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~ 304 (591)
T PTZ00207 225 KAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKR 304 (591)
T ss_pred HHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCC
Confidence 11 000 00 0 00 000
Q ss_pred hh-hHhh-hhhh-------h-ccc-----------CCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 046667 266 EA-EEQK-IQEL-------D-RDK-----------GNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS 324 (540)
Q Consensus 266 ~~-~~~~-~~~~-------~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
++ +.+. ..+. . .+. ....+-+.... ....+|.++...++....-......+.++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l---~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~ 381 (591)
T PTZ00207 305 PHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGL---KTARLWCLLWSIFCCVGAHFVIIFNARFIYT 381 (591)
T ss_pred cCCCccccccccccccccccccccccccccccCCCCCCcchHHHHH---hchhHHHHHHHHHHhhCchheeeecHHHHHH
Confidence 00 0000 0000 0 000 00000111111 1234566666666655445555556667777
Q ss_pred Hh-cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchh--------H-HHHHHHHHHHHHHHHHhcc
Q 046667 325 AV-GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFA--------I-QMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 325 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~--------~-~~~~~~~~~~~~~~~~~~~ 394 (540)
.+ |..++... ......+..+++.+|++..|.+.....+|+ . +.+..+ +.++.+++.+..
T Consensus 382 sl~g~~~~~~~----------~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~ 450 (591)
T PTZ00207 382 ALAGEAPDDAL----------NTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTL 450 (591)
T ss_pred HhcCCCCCccc----------eeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHC
Confidence 76 55222200 011345566677777777777762222221 2 222222 444444444433
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHH-HHHHHHHhhccccccCC
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVG-AFGFLYLAQSKDKTKTD 473 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~-~~i~~~~~~~~~~~~~~ 473 (540)
. ...+.+..++.+++.....++....++|+|. ++-|+-.-+.....-+|..+- -.+.|.++|.-.....+
T Consensus 451 p--------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~ 521 (591)
T PTZ00207 451 P--------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQ 521 (591)
T ss_pred C--------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 1 1223333333334444445667778899999 767776666666666666655 55778888754321111
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 474 AGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
..=....=++.+|++++++++++++....+
T Consensus 522 ~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 522 DVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred CeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 000122347788999999999998887743
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91 E-value=1.4e-21 Score=195.51 Aligned_cols=415 Identities=11% Similarity=0.066 Sum_probs=230.7
Q ss_pred HHHHHHHhHhHHHH-HHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh-cchhHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISL-VTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYGMTLMLM 108 (540)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~~~~~~~ 108 (540)
..+...+....+.. ....+.+++ |++.++.+++.+.+........+++|+++|| +|||++++++.++.
T Consensus 29 ~~~~~~~~~y~~~~~l~~yl~~~l----------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~ 98 (500)
T PRK09584 29 IELWERFGYYGLQGIMAVYLVKQL----------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVL 98 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 33333333333333 444556777 8999999999988877777777899999999 59999999999999
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCccc--chhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 109 VICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKT--RGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
+++.++++++.+. .+.+.++|+++|++.|...+...+++.|++|+++ |..+.++++.+.++|..+||.+++++
T Consensus 99 ~ig~~l~~~~~~~-----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l 173 (500)
T PRK09584 99 AIGYALVAWSGHD-----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWL 173 (500)
T ss_pred HHHHHHHHHhccc-----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887542 5677789999999999999999999999998654 45678889999999999999999998
Q ss_pred HHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH----HHhCCCChhhHHHhhccHHHHHHHH-----
Q 046667 187 SSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW----RMKMPETARYTALVAKNAKQAASDM----- 257 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~----~~~~~esp~~~~~~~~~~~~~~~~~----- 257 (540)
.+ ..|||+.|++.++..++..+. ...++|.++....++.+..+.....
T Consensus 174 ~~-----------------------~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 174 AA-----------------------KYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred HH-----------------------hhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHH
Confidence 64 345999999977544443322 2233442111000000111100000
Q ss_pred ----HHHHhhhchhhHhh--------hhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 046667 258 ----SKVLQVELEAEEQK--------IQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA 325 (540)
Q Consensus 258 ----~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (540)
......+.+..... .......... .++. .++ ..+... ..+.....++......+..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~---~~~~~~-~~~~~~i~f~~~~~q~~~~l~~ 301 (500)
T PRK09584 231 LIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFA----MKGA-ARR---KMIVAF-ILMLEAIIFFVLYSQMPTSLNF 301 (500)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhh----cCHH-HHH---HHHHHH-HHHHHHHHHHHHHHHhccHHHH
Confidence 00000000000000 0000000000 0001 111 111111 1112223334333333333222
Q ss_pred h---cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHH----HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 046667 326 V---GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYW----FTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWT 398 (540)
Q Consensus 326 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (540)
. .......+.... .+. ......+..++..+ ..+++.+|.+..+.+.+++++.+++++.+.....+..
T Consensus 302 ~~~~~~~~~~~g~~i~-----~~~-~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~ 375 (500)
T PRK09584 302 FAIRNVEHSILGIAVE-----PEQ-YQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAN 375 (500)
T ss_pred HHHHhccccccceEEC-----HHH-HHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 111111111000 001 11222222233333 3455555665667778888888888887766542211
Q ss_pred c-CCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCC
Q 046667 399 H-KSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYP 477 (540)
Q Consensus 399 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~ 477 (540)
. ...+.++.+...++.+.+.....|...+++.+..|++.||+++|+......+|..++..+......... ..++ ..
T Consensus 376 ~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~--~~~~-~~ 452 (500)
T PRK09584 376 DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDN--VTDP-LM 452 (500)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cccc-hh
Confidence 1 111233455555666777777788999999999999999999997766666666665555543221000 0000 00
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHH
Q 046667 478 PGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 478 ~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
...++...|...++.+++..+..+
T Consensus 453 ~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 453 SLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 112467778777777665554444
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=4.6e-21 Score=191.52 Aligned_cols=369 Identities=10% Similarity=-0.004 Sum_probs=216.0
Q ss_pred HHHHHHHhHhHHHH-HHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh----hcch-hHHHHHH
Q 046667 31 GFFTDAYDLFCISL-VTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD----KLGR-KKVYGMT 104 (540)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D----r~Gr-r~~~~~~ 104 (540)
+.+...+....+.+ ....+.+.+ +++..++|.+..+..+..++..|+.|+++| |+|| |+.++++
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~----------Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g 83 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVV----------GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIG 83 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhh
Confidence 33333443444444 344455556 899999999999999999999999999999 6699 5566678
Q ss_pred HHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 105 LMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
.+..+++.+++...++.+....+..+++.-++.+++.........++..|.. +++||.+..++...+.++|..+.+.+.
T Consensus 84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877666654443211122445666667778888888888999999999 589999999987777788877666665
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHh
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQ 262 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (540)
..+....+. ..+..+|+....+.++..++..+. .+..+|.++.. ..+.+
T Consensus 164 ~~~~~~~g~----------------~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~--~~~~~------------ 213 (473)
T PRK10429 164 LPFVNYVGG----------------GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSD--NQVSA------------ 213 (473)
T ss_pred HHHHHHhCC----------------CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcc--ccccc------------
Confidence 544433331 012346888877766665554443 34466653210 00000
Q ss_pred hhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHH
Q 046667 263 VELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVY 342 (540)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (540)
++++.+..+.++.-...+ .++......+......+....+.+++.+.....+ .
T Consensus 214 -------------~~~~~~~~~~~~~~~~n~---~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~-----------~ 266 (473)
T PRK10429 214 -------------EGSHLTLKDIVALIYKND---QLSCLLGMALAYNIASNIINGFAIYYFTYVIGDA-----------D 266 (473)
T ss_pred -------------cccCCCHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCH-----------H
Confidence 000011111111111111 1222222222222233332223232222111010 0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCc
Q 046667 343 KIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPN 422 (540)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (540)
..+ .......+..+++.++.+++.||+|+|+.+..+..+..++.+.+..... . .. .......+..+..+.......
T Consensus 267 ~~~-~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~i~~~l~g~~~~~~~ 342 (473)
T PRK10429 267 LFP-YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGL-A-AP-HNALLIVIAGILLNIGTALFW 342 (473)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-c-Cc-hhHHHHHHHHHHHHHHHHHHH
Confidence 111 2333445666788889999999999999988777665555444332210 0 11 122222233333333333344
Q ss_pred cceeeeecccCc-------hhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 046667 423 ATTFVVPAEIFP-------ARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKT 470 (540)
Q Consensus 423 ~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~ 470 (540)
+..+++.+|..+ .+..|...|.......++..+++.+.|.+.+..|.+
T Consensus 343 ~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 343 VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 566778888855 344566899999999999999999999999877754
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=6.3e-20 Score=179.12 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=114.6
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
++++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++++...+. ...+.++..+.+++.|
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~-----~~~~~l~l~li~iG~G 115 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIH-----PSFLYLSLAIIVCGYG 115 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999 99999999999999998877654321 1233444444556666
Q ss_pred cchhhHHHHHhhhcCcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHH
Q 046667 143 GDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVM 220 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~ 220 (540)
...+...++++|.+|++ +|..+.++.+.+.++|..++|.+.+++.+ ..||++.|.
T Consensus 116 ~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~-----------------------~~Gw~~~F~ 172 (493)
T PRK15462 116 LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE-----------------------EYSWAMGFG 172 (493)
T ss_pred cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh-----------------------hhChHHHHH
Confidence 77788889999999975 68999999999999999999999999853 456999999
Q ss_pred hhhHHHHHHHHH
Q 046667 221 VGALPAALTYYW 232 (540)
Q Consensus 221 ~~~~~~~~~~~~ 232 (540)
+.++..++.++.
T Consensus 173 iaaigm~l~li~ 184 (493)
T PRK15462 173 LAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHH
Confidence 876655444443
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=1.6e-20 Score=186.64 Aligned_cols=348 Identities=11% Similarity=0.063 Sum_probs=213.0
Q ss_pred HHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh----cchh-HHHHHHHHHHHHHHHHhhcc
Q 046667 44 LVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK----LGRK-KVYGMTLMLMVICSIASGLS 118 (540)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr----~Grr-~~~~~~~~~~~i~~~~~~~~ 118 (540)
.....+.+++ +++..+.|.+.++..+..++..|+.|+++|| +||| +.++++.+..+++.++....
T Consensus 31 ~l~~~~t~~~----------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~ 100 (444)
T PRK09669 31 FLAYFYTDVF----------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT 100 (444)
T ss_pred HHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC
Confidence 4455566667 8999999999999999999999999999998 7875 55667778887777666656
Q ss_pred CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 046667 119 FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAP 197 (540)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~ 197 (540)
++.+....+..+++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+....+.
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~----- 175 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK----- 175 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 54332333556666677777766777777889999998 568899999999999999988888877666654431
Q ss_pred CCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhh
Q 046667 198 AYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELD 276 (540)
Q Consensus 198 ~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (540)
.....+|+..+.+.++++++..+.. +..+|.++. .++++.+..+
T Consensus 176 -----------~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------- 220 (444)
T PRK09669 176 -----------GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP---EVDNSSSVWK--------------------- 220 (444)
T ss_pred -----------CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC---CCcCCCCHHH---------------------
Confidence 0124579988888777666554443 334543211 0000000000
Q ss_pred cccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhh
Q 046667 277 RDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCST 356 (540)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (540)
.....++++.. +.++ ...++.............++.+. .+... ...........+..
T Consensus 221 ----~~~~~~~n~~~----~~l~---~~~~~~~~~~~~~~~~~~y~~~~-~~~~~-----------~~~~~~~~~~~i~~ 277 (444)
T PRK09669 221 ----DLKLLLGNSQW----RIMF---IFNVVLLTAVVTRGGATLYYVNY-VLLRP-----------DLATLFLVTGMIAG 277 (444)
T ss_pred ----HHHHHhCCchH----HHHH---HHHHHHHHHHHHHhhhhheeeee-ecCCH-----------HHHHHHHHHHHHHH
Confidence 00111122211 1111 11111111111111111111111 11110 01122333445666
Q ss_pred hhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCc--
Q 046667 357 VPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFP-- 434 (540)
Q Consensus 357 ~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-- 434 (540)
+++.++.+++.||+|+|+.+..+..+..++...+.+.. .+......+..+..+++.....++.+++.+|..+
T Consensus 278 ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~ 351 (444)
T PRK09669 278 LFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE 351 (444)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 77888899999999999998877665554333322221 1122223333334444444556778888888875
Q ss_pred -----hhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 046667 435 -----ARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKT 470 (540)
Q Consensus 435 -----~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~ 470 (540)
.+..|...|+.+.+..+|..+++.+.|.+.+..|.+
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 233567789999999999999999999999887764
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=1e-19 Score=174.99 Aligned_cols=380 Identities=16% Similarity=0.162 Sum_probs=241.0
Q ss_pred HHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc-hhHHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG-RKKVYGMTLMLMV 109 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G-rr~~~~~~~~~~~ 109 (540)
-++++.+..+.+.|..+..-++. +.|..|+|.+.++..+...++++++|+++||++ +||.+.+..++.+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~----------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~ 79 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESR----------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSA 79 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 34555555566667777766666 899999999999999999999999999999986 5778877777777
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 046667 110 ICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF-ALIVSS 188 (540)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~ 188 (540)
+........++ ++.+++.-++..+...+..|...++..+...+ +++-.|-.-...++|.+++... +..+..
T Consensus 80 ~~~~~~~~~~~------f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~ 151 (400)
T PF03825_consen 80 LALLLLAFSSS------FWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGG 151 (400)
T ss_pred HHHHHHHHhcc------HHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHh
Confidence 77767777666 67788888888888888899999998888863 2334444555666676666544 222222
Q ss_pred HhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhh
Q 046667 189 AFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAE 268 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (540)
..+ ..+....+++.+...++.....+.+|+.|+.. ..+++.++
T Consensus 152 ~~~--------------------~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~-~~~~~~~~---------------- 194 (400)
T PF03825_consen 152 YLG--------------------ISGTSLIFYIAAILSLLLAGFALFLPKTPPKR-SAKESVKK---------------- 194 (400)
T ss_pred hhc--------------------cccccHHHHHHHHHHHHHHHHHHhCCCCcccc-ccCCCccc----------------
Confidence 111 11133455665555555444456678876320 00000000
Q ss_pred HhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-CCCcccchhhHHHHHHHHHH
Q 046667 269 EQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVG-WIPSAKTMNAIQEVYKIARA 347 (540)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 347 (540)
....+..+++++|. ++...+..+...........|.+.++++.| ..... ...
T Consensus 195 --------~~~~~~~~llk~~~-------~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------------~g~ 247 (400)
T PF03825_consen 195 --------LLGLDALKLLKNPR-------FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------------IGI 247 (400)
T ss_pred --------ccchHHHHHhcCcc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------------HHH
Confidence 00001112223321 222222333333444455566777777766 32222 222
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHH---HHHHHHhhcCCccc
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIY---SLTFFFANFGPNAT 424 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 424 (540)
......+.+++.-...+++.+|+|.|+++.++.+..++=..+...... +.+...... .+..+.........
T Consensus 248 ~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~------~~~~~~~~~~l~q~lhG~tf~~~~~a 321 (400)
T PF03825_consen 248 LWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD------PWPFIVALQLLGQLLHGLTFGLFHAA 321 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC------CcHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 455667788999899999999999999999999888888877776531 111111111 12233333323345
Q ss_pred eeeeecccCchhhhhhhhHHHHHH-HHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-h
Q 046667 425 TFVVPAEIFPARLRSTCHGISAAS-GKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-L 502 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~ 502 (540)
...++.+..|++.|+++.++.+.. ..+|..+|..+.|++.|..+.+ ..+.|...+.+.+++.++..++.. +
T Consensus 322 ~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~-------~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 322 SVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR-------GMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch-------hhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 567889999999999999998876 5689999999999999865531 234455566666666666555555 4
Q ss_pred ccc
Q 046667 503 VPE 505 (540)
Q Consensus 503 ~~~ 505 (540)
.||
T Consensus 395 fk~ 397 (400)
T PF03825_consen 395 FKP 397 (400)
T ss_pred ccC
Confidence 444
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.88 E-value=5.1e-19 Score=173.34 Aligned_cols=372 Identities=13% Similarity=0.140 Sum_probs=248.8
Q ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH-HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccch
Q 046667 67 PNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY-GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDY 145 (540)
Q Consensus 67 ~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (540)
.+..++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+.+. +.++...+.-++.-++.+...
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~----~~~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSP----GQWWLALVLFIIANVGYEASN 144 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999877654 4455566667777766532 114555555566667778888
Q ss_pred hhHHHHHhhhcCcccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 046667 146 PLSATIMSEYANKKTR--------------------------GAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAY 199 (540)
Q Consensus 146 ~~~~~~i~e~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~ 199 (540)
....+++.|..+++++ ++..+.-.+...+|.++..++...+....+..
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~------ 218 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST------ 218 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc------
Confidence 9999999999999988 99999988888899888888777665433320
Q ss_pred CCCCccccCCCCCcchHHHHHhhhHHHH-HHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcc
Q 046667 200 EDDPIASTAPQADYLWRIIVMVGALPAA-LTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRD 278 (540)
Q Consensus 200 ~~~~~~~~~~~~~~gwr~~f~~~~~~~~-~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (540)
..+...-|..+.+.++.-+ ..+...+++||.|+.. ..++...-.....++.
T Consensus 219 ---------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-~~~~~~~~~~~g~~~l------------------ 270 (477)
T PF11700_consen 219 ---------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-PLPSGSSYLRFGFKRL------------------ 270 (477)
T ss_pred ---------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCcchhHHHHHHHHH------------------
Confidence 1223456888888666544 4566677888887520 1111111111111111
Q ss_pred cCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhh
Q 046667 279 KGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTV 357 (540)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (540)
++.+++. ++.+.+....+.+++..-+......+...+.. .+|++..+.. ...+...+..+
T Consensus 271 ----~~t~k~~---~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~------------~~~l~~~i~a~ 331 (477)
T PF11700_consen 271 ----WRTFKEI---RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLI------------VFGLVVQIVAI 331 (477)
T ss_pred ----HHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHH------------HHHHHHHHHHH
Confidence 1111111 11123444455556555555555555555555 4777766522 26677778889
Q ss_pred hhHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHHh--cccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccC
Q 046667 358 PGYWFTVAFIDKIGRF--AIQMMGFFFMTVFMFALAI--PYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIF 433 (540)
Q Consensus 358 ~~~~~~~~l~d~~g~r--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (540)
+|.++.+++.||+|.| +.+..+.+...+..+...+ ... .....+.+ ...+..+..+....+..+..-++.+|+.
T Consensus 332 ~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~-~~g~~~~~-~f~~~a~~~G~~~G~~qs~sRs~~~~Li 409 (477)
T PF11700_consen 332 IGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPS-FFGLKSPW-EFWVLAVLIGLFMGGIQSASRSLFSRLI 409 (477)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhc-ccCcccHH-HHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 9999999999999998 7766665554332222221 111 00111223 3444455555666667788889999999
Q ss_pred chhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 046667 434 PARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGK 509 (540)
Q Consensus 434 p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (540)
|+++.+...|++...+...+.+||+++|.+.+.++ +.+..+....++.+++.++.+.++.+|++
T Consensus 410 P~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg------------~~r~g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 410 PPGREAEFFGLYAITGKASSWLGPLLFGLITDATG------------SQRYGFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchhHHHHHHHHHHHHHHHHhhccchhhh
Confidence 99999999999999999999999999999998766 46778888888888888888777766554
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=1.8e-20 Score=185.84 Aligned_cols=377 Identities=13% Similarity=0.031 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc-----h
Q 046667 23 TAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG-----R 97 (540)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G-----r 97 (540)
..+.++...++..++.........+.+.+++ +++.++++...+...+...+-.+ +|+++||++ |
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~l----------g~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rR 94 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDL----------GLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTK 94 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccc
Confidence 4455566667888887444445556667778 99999999999999999999666 999999998 7
Q ss_pred hHHHHHHHHHHH-HHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhH---HHHHHHHHH
Q 046667 98 KKVYGMTLMLMV-ICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF---IAAVFAMQG 173 (540)
Q Consensus 98 r~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~---~~~~~~~~~ 173 (540)
|+.++++.++.+ +.....+..++. .....+.+++.+++.+...++.-++..|..+ +++... .+......+
T Consensus 95 r~~l~~~~~l~~~~~~~~l~~~~~~-----~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~ 168 (468)
T TIGR00788 95 RWYLVLSGLLGSAILYGLLPGKVSS-----AKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASA 168 (468)
T ss_pred hHHHHHHHHHHHHHHHHhcccccch-----HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHH
Confidence 777777777663 433333333331 3444558899999999999999999999998 555443 334444456
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHH
Q 046667 174 FGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQA 253 (540)
Q Consensus 174 ~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 253 (540)
+|.++|+.+++.+.+. .+||..|++.+...++..+..++++|++.. ..++..++.
T Consensus 169 ~G~~vg~~l~G~l~~~-----------------------~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~--~~~~~~~~~ 223 (468)
T TIGR00788 169 TGGLISSLLGGPLLDK-----------------------TLTRILFLITAALLLLQLFVSNLSKERRAF--VRPRIGTYL 223 (468)
T ss_pred HHHHHHHHHHHHHHHh-----------------------cCcchHHHHHHHHHHHHHHHHHhccccccc--ccccccccc
Confidence 8999999999988643 359999999777766665556778886421 001100000
Q ss_pred HHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHhcCCCcc
Q 046667 254 ASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTST-WFLLDIAFYSQNLFQKDIFSAVGWIPSA 332 (540)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 332 (540)
. ........... +..+ +...+.++.++++... ..+...+. +...........++.+ ...|+++..
T Consensus 224 ~-~~~~~~~~~~~---~~~~---~~~~~l~~~l~~~~i~----~~l~fifl~~~~~~~~~~~~f~~~~---~~lG~s~~~ 289 (468)
T TIGR00788 224 E-MNMALLTLGVL---ANVK---VQILGLRGAIQLLEIA----KPLIFIFLSYANLPGASGSVFCATT---QCLPGGPSF 289 (468)
T ss_pred h-hhhhhhhhhHH---HHHH---HHHHHHHHHHhcHHHH----HHHHHHHHHHhhcCCCCceeEEEEc---ccCCCCcch
Confidence 0 00000000000 0000 0000011111222111 11111111 1100000000001111 235677766
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC---CchhHHHHH
Q 046667 333 KTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK---SNRLGFVII 409 (540)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 409 (540)
.+. ......++.+++..+.+++.+|++.|+.+.++.++.+++..........+... +..+.....
T Consensus 290 ~G~------------~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~ 357 (468)
T TIGR00788 290 SGM------------SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGD 357 (468)
T ss_pred hhh------------HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeeh
Confidence 443 55556688888888999999999999999888887777665533221111100 111111111
Q ss_pred HHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
..+.....+....+ ...++.+..|++.+|+..++.+.+.++|..+++.+.+.+.+..|
T Consensus 358 ~~l~~~~~g~~~~~-~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 358 SIIAEVLAQLKFMP-FLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hHHHHHHHHHHHcc-HHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11222222222333 46788999999999999999999999999999999999998766
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=9.2e-22 Score=168.61 Aligned_cols=402 Identities=10% Similarity=0.035 Sum_probs=243.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh-cchh
Q 046667 20 YHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK-LGRK 98 (540)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr 98 (540)
+|...++..++..|-.+++....+....+...+. +++.++..++.++|..-..+-++++|++.|| +|-|
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~----------ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir 110 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDS----------NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIR 110 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhccc----------ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhh
Confidence 4566677777777777777777777766666666 8999999999999999999999999999997 5887
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
..-++-++...+|.++++.-.-. +.||+++++||+.|+|.-....+...++.-|+..||.+.++|+.....-+|..+
T Consensus 111 ~gtii~~~fv~~GqliFa~Ggi~---~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 111 LGTIILCIFVFLGQLIFAAGGIS---HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhchHH---HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 66555555555676666543211 228999999999999988888888999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
-..+.+++.+..+..++.. .....|-...+ ....+...++...-+ .+ .+ +.+++.+.
T Consensus 188 Nf~lm~~ly~~~~~~~~~~-----------ghT~LG~~l~~--~~~tc~~slical~l----g~---~D---~rAerilh 244 (459)
T KOG4686|consen 188 NFLLMPFLYDTMGRMFPGV-----------GHTLLGLWLCF--EVKTCKQSLICALSL----GL---SD---DRAERILH 244 (459)
T ss_pred eeeecHHHHHHHHHhcccc-----------hHHHHHHHHHH--HHHHHHHHHHHHHHh----hh---hh---hHHHHHHh
Confidence 8888888876655321100 00000111111 111111111111000 00 00 00000000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNA 337 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (540)
+ +. ... -+..+......+..+ +|.+....++.....+.+....|.++++ .|+++...+
T Consensus 245 ~----e~----g~~--Ge~pkLtdv~~f~pp--------fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~--- 303 (459)
T KOG4686|consen 245 L----EE----GFL--GEEPKLTDVNTFYPP--------FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAG--- 303 (459)
T ss_pred h----hc----Ccc--cCCcccccccccCcc--------HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhcc---
Confidence 0 00 000 000011111111222 2323333333333344444455666654 677665533
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHH-HHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 338 IQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTV-FMFALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
.+...+..+ ..+.+++.|.++||+|++...+.+..+..+ +...+.+... +++..+.+..+....
T Consensus 304 --------~i~s~vy~I-sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~l------sPy~~m~~lGLsysl 368 (459)
T KOG4686|consen 304 --------NILSTVYGI-SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFL------SPYTSMTFLGLSYSL 368 (459)
T ss_pred --------chhhhhhhh-hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhc------cHHHHHHHHhhhHHH
Confidence 233444443 455667899999999998877665544433 3344433331 334444444443333
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHH
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLG 496 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (540)
... ..|..++.+.|.++.|++.|.++.+.++|-.+.|++.|.+.|..+ .....+.-|+..+.+++.+
T Consensus 369 lAc----slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g---------~y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 369 LAC----SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG---------SYDNLEAFFLIIGLMALTS 435 (459)
T ss_pred HHH----HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC---------chhhHHHHHHHHHHHHHHH
Confidence 333 345566788999999999999999999999999999999997444 1223344455666666666
Q ss_pred HHHHHhcccC
Q 046667 497 LLFTFLVPES 506 (540)
Q Consensus 497 ~~~~~~~~~~ 506 (540)
..+.+.+.++
T Consensus 436 vgil~~~N~k 445 (459)
T KOG4686|consen 436 VGILFYLNKK 445 (459)
T ss_pred HHHHhheecc
Confidence 6666655443
No 107
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.86 E-value=7.8e-19 Score=166.71 Aligned_cols=391 Identities=14% Similarity=0.100 Sum_probs=258.8
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhh----cchhH-HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHh
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK----LGRKK-VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLG 138 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (540)
++++...|.+..+.-+--++.-|+.|.++|| +||+| .++++.+..++.+.++-.+++.+....+...++.-.+.+
T Consensus 44 Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~ 123 (467)
T COG2211 44 GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLG 123 (467)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHH
Confidence 8999999999999999999999999999995 88765 567788999999999998886444445677788889999
Q ss_pred hccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH
Q 046667 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI 217 (540)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~ 217 (540)
++.......-.++..|.++ ++||.+..++-+.+.++|..+...+...+....+.. ....||+.
T Consensus 124 l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----------------~~~~g~~~ 187 (467)
T COG2211 124 LGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----------------DKALGYQG 187 (467)
T ss_pred HHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------cchhhHHH
Confidence 9999999999999999986 789999999999999999999988888888777641 22678998
Q ss_pred HHHhhhHHHHHHHHHH-HhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhH
Q 046667 218 IVMVGALPAALTYYWR-MKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGL 296 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (540)
.-.+.++++++..+.. +-.+|.+.. ..+.+. ..+.+..+.+..-...++++
T Consensus 188 ~~~~~~vi~~i~~l~~~~~v~ER~~~--~~~~~~--------------------------~~~~~~~~~~~~~~~Nrp~~ 239 (467)
T COG2211 188 TALVLGVIGVILLLFCFFNVKERVVE--TQPTKT--------------------------GVKLKLKDSFLLIFKNRPLL 239 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCc--cccCcc--------------------------cccccHHHHHHHHHccchHH
Confidence 8888777777665554 446665431 000000 00111111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAI 375 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~ 375 (540)
.. +...++....+........++.+. +|... ............+.+++.++..++.+|+|+|++
T Consensus 240 ~~---l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~------------l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~ 304 (467)
T COG2211 240 LL---LLMNLLLFIAFNIRGSIMVYYVTYVLGDPE------------LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL 304 (467)
T ss_pred HH---HHHHHHHHHHHHHHhhhhheeEEEEcCChH------------HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH
Confidence 11 122222222222222222222111 11111 122335555556666778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCc-------hhhhhhhhHHHHHH
Q 046667 376 QMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFP-------ARLRSTCHGISAAS 448 (540)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~ 448 (540)
+.++.++..++.+++.+.. .+...++++..+..+.+.....++.|++++|... .+..|...|...++
T Consensus 305 ~~~~~~~~~i~~~~~~f~~------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 305 FLIGLLLLAVGYLLLYFTP------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred HHHHHHHHHHHHHHHHhhc------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 9999888888888777655 2345555555566666666677899999999865 34468889999999
Q ss_pred HHHhHHHHHHHHHHHhhccccccCC--CCCCCCcchhhHHHHH-HHHHHHHHHHHHhcccCCCCChhhhcccccc
Q 046667 449 GKLGAIVGAFGFLYLAQSKDKTKTD--AGYPPGIGVKNSLIVL-GVVNLLGLLFTFLVPESKGKSLEEMSGENQD 520 (540)
Q Consensus 449 ~~~g~~i~~~i~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (540)
.-+|.+++..+.|++.+..|..... +......|.+..+.+. +++.+++++...+.|-++ +..+++.++.++
T Consensus 379 ~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L~~-~~~~~I~~eL~~ 452 (467)
T COG2211 379 RKLGLALAGFIPGWILGAIGYVPNVSAQSASALFGIRFLFIILPALLLLLAAIIIFFYKLNE-KMHKEIIEELEQ 452 (467)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Confidence 9999999999999999887764322 3222334555555444 444445554444554433 334444444433
No 108
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.86 E-value=2e-19 Score=165.76 Aligned_cols=411 Identities=12% Similarity=0.049 Sum_probs=270.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc
Q 046667 16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL 95 (540)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~ 95 (540)
|..++||.++.+.++..+.+++.+-.+++.......-| + +....-|+.-+|.+.+....+++-|+.||+
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Y----------g-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~ 106 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFY----------G-SSSAADWLSMIYMVVSVPFGFAAMWILDKF 106 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHh----------c-chHHHHHHHHHHHHHHHHHhhHHHHhhccc
Confidence 56678999999999999999998888888887777776 5 777888999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCcchhhH--HHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHH
Q 046667 96 GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMA--TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (540)
Q Consensus 96 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (540)
|-|...+++..+..+|+.+-..+....-.+.++ ....+..+.+.++-........+..-|||++||..+..+-.++..
T Consensus 107 GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~ 186 (480)
T KOG2563|consen 107 GLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNP 186 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcch
Confidence 999999999999999999987776532223345 788899999998887777777888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH--HHHhhhHHHHH-HHHHHHhCCCChhhHHHhhccH
Q 046667 174 FGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI--IVMVGALPAAL-TYYWRMKMPETARYTALVAKNA 250 (540)
Q Consensus 174 ~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~--~f~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~~ 250 (540)
+|.++|.++...+..... ..++..|-. .|+.....+.+ ..+..+..+|.|+......
T Consensus 187 LGvavg~llppilV~~~~-----------------~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s--- 246 (480)
T KOG2563|consen 187 LGVAVGFLLPPILVPSSK-----------------DSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSAS--- 246 (480)
T ss_pred HHHHHHhhccceecCCCC-----------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchh---
Confidence 999999998887753221 123455765 35543333333 3333344455443210000
Q ss_pred HHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCC
Q 046667 251 KQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIP 330 (540)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 330 (540)
..+.. ..+..+-.++-... +.+......+......+++....+...+.-.|+..
T Consensus 247 ~~~~~-----------------------~~~f~~si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~ 300 (480)
T KOG2563|consen 247 QAALQ-----------------------DASFPKSIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEG 300 (480)
T ss_pred Hhhhh-----------------------cCcHHHHHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCc
Confidence 00000 00011111111111 13344444444444556666555543333344444
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHhcccccccCCchhHHHHH
Q 046667 331 SAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFA-IQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVII 409 (540)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (540)
...| .......+.++++..+.|.+.||.+.-+ ..++......++.+.+..... .....+.+..
T Consensus 301 ~~aG------------~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~----~~~~~viv~~ 364 (480)
T KOG2563|consen 301 VFAG------------YIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL----FLGDSVIVFT 364 (480)
T ss_pred cccc------------hhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCceEehhh
Confidence 3333 3666777788889999999999987644 444444444444222222111 1122233444
Q ss_pred HHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcc-hhhHHHH
Q 046667 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIG-VKNSLIV 488 (540)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~ 488 (540)
.....++++.+..|+..-+..|..-|..-++..|+.+..+++.+++-.++.+...+..+. .+ +...-+.
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~----------~~~~~~~~i~ 434 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP----------PGNTFPANIF 434 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC----------CCCCccchhH
Confidence 445556677778899999999987777789999999999999999999999988853321 02 2223344
Q ss_pred HHHHHHHHHHHHHhcccCCCC
Q 046667 489 LGVVNLLGLLFTFLVPESKGK 509 (540)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~ 509 (540)
....+++..++..+.++..+|
T Consensus 435 ~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 435 LTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred hHHHHHHHHHHHhhhhhhHHh
Confidence 555555566666655555444
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.85 E-value=4.3e-19 Score=175.50 Aligned_cols=349 Identities=15% Similarity=0.115 Sum_probs=234.2
Q ss_pred HHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh----hcchhHH-HHHHHHHHHHHHHHhhcc
Q 046667 44 LVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD----KLGRKKV-YGMTLMLMVICSIASGLS 118 (540)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D----r~Grr~~-~~~~~~~~~i~~~~~~~~ 118 (540)
...+...+.. ++++...|.+..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++...
T Consensus 23 ~~~~f~~~~~----------gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 23 YLLYFYTDVL----------GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc
Confidence 4555666666 899999999999999999999999999999 8998766 556888888888887766
Q ss_pred -C-CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 046667 119 -F-GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFK 195 (540)
Q Consensus 119 -~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 195 (540)
+ +.+....+..+.+.-++..++.........++..|.++ +++|.+..+.-..+..+|.++...+...+....+.
T Consensus 93 ~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~--- 169 (428)
T PF13347_consen 93 PPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG--- 169 (428)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---
Confidence 4 21111123445777777799999999999999999998 57899999999999999998777777777665553
Q ss_pred CCCCCCCCccccCCCCC-cchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhh
Q 046667 196 APAYEDDPIASTAPQAD-YLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQ 273 (540)
Q Consensus 196 ~~~~~~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (540)
... .+|++..++.+++.++..+. .+..+|+++.. .+ + +
T Consensus 170 --------------~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~--~~---~---------------------~ 209 (428)
T PF13347_consen 170 --------------GDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEV--TE---Q---------------------E 209 (428)
T ss_pred --------------CccchHHHHHHHHHHHHHHHHhhhhhheeeeccccc--cc---c---------------------c
Confidence 122 37999999877777765554 45567721110 00 0 0
Q ss_pred hhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHH
Q 046667 274 ELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIA 352 (540)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
+..+-++..+..++++..+ .++.. .++............+.+.+. .+.. . .........
T Consensus 210 ~~~~~~~~~~~~~~nr~~~----~l~~~---~~~~~~~~~~~~~~~~y~~~~vl~~~-~------------~~~~~~~~~ 269 (428)
T PF13347_consen 210 KKISLRDSLRSLFRNRPFR----ILLLA---FFLQWLAFALMNTFLPYYFTYVLGNE-G------------LISIFMLIF 269 (428)
T ss_pred cccccccchhhhcccchHH----HHHHH---HHHHHhhhhhhhhHHHHHHHHHhcCc-h------------hhHHHHHHH
Confidence 0000111122223332221 22222 222222222222223333332 1111 1 122244456
Q ss_pred HhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeeccc
Q 046667 353 LCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEI 432 (540)
Q Consensus 353 ~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (540)
.+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+... .+.....+..+..+.+........+++.+|.
T Consensus 270 ~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~ 343 (428)
T PF13347_consen 270 FVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP------GSPWLVLILFILAGIGYGAFFVIPWAMLADV 343 (428)
T ss_pred HHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh------hhHHHHHHHHHHhHhhhcccccccccccccc
Confidence 6777888889999999999999999999998888877766541 2334444555555555555667888999998
Q ss_pred Cch-------hhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 046667 433 FPA-------RLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTK 471 (540)
Q Consensus 433 ~p~-------~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~ 471 (540)
.+. +..|...|+.++...++..+++.+.+.+.+..|.+.
T Consensus 344 id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~ 389 (428)
T PF13347_consen 344 IDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDA 389 (428)
T ss_pred hhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCC
Confidence 863 346999999999999999999999999998776543
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.85 E-value=3.8e-19 Score=167.33 Aligned_cols=376 Identities=14% Similarity=0.110 Sum_probs=223.6
Q ss_pred HHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMV 109 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~ 109 (540)
..+...+..+..-+..+. +.++. |+|.+++|.+.++..+...+.+|+.|.++||+|.||-++....+..
T Consensus 15 ~~f~~Ff~~gi~~pF~~iWL~~~~----------GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 15 FYFFYFFIWGIFLPFFPIWLTQVA----------GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILL 84 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHH
Confidence 344444445555555554 44446 8999999999999999999999999999999997776554433222
Q ss_pred --HHHHHh-hcc----CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHH
Q 046667 110 --ICSIAS-GLS----FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIF 182 (540)
Q Consensus 110 --i~~~~~-~~~----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 182 (540)
.+.... .+. .|. +...+++-+..|++..+..|+.-+++.++.. +.+.-.|-.-+..++|.+++..+
T Consensus 85 ~l~~pff~~v~~pll~~n~-----~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~ 157 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLLQSNF-----WLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLL 157 (412)
T ss_dssp HTCHHHHHHTHHHHHHTT------HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHH
Confidence 222221 221 221 2334455555666666777777777777653 33455566677888999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHh-CCCChhhHHHhhccHHHHHHHHHHHH
Q 046667 183 ALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMK-MPETARYTALVAKNAKQAASDMSKVL 261 (540)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (540)
+|.+.+.. -+..|++....+++..++.++ -|+.++.....+....+
T Consensus 158 ~G~L~~i~------------------------p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------- 204 (412)
T PF01306_consen 158 AGILFNIN------------------------PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK--------- 204 (412)
T ss_dssp HHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS----------
T ss_pred hheeeeeC------------------------ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC---------
Confidence 99887532 357777766655554444333 33433221000000000
Q ss_pred hhhchhhHhhhhhhhcccCC---ccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhH
Q 046667 262 QVELEAEEQKIQELDRDKGN---GYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAI 338 (540)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 338 (540)
+++.+ ..+.++.+ .+|...+........++......+.++... |....
T Consensus 205 ---------------~~~~~~~~~~~l~k~~-------~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~-f~~~~------ 255 (412)
T PF01306_consen 205 ---------------KDKVSLKDVLSLFKMR-------NFWFFVLFVIGVAAIYDVFDQQFPIYFASF-FQSAG------ 255 (412)
T ss_dssp --------------------HHHHHHHTTSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSHH------
T ss_pred ---------------CCCCcHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccc------
Confidence 00000 01122222 234333333333334444443445554442 22111
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhh
Q 046667 339 QEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFAN 418 (540)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (540)
.... .-+.......+..++...+.+++.+|+|.|+.++++..++.+=....++... .+.+...-...+.-.
T Consensus 256 ~g~~-~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~--------~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 256 QGNQ-MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN--------PWVISLIKLLHALEF 326 (412)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S--------HHHHHHHHHHHHHHH
T ss_pred cChh-HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc--------hHHHHHHHHHHHHHH
Confidence 1111 2223566777888888899999999999999999999999988888877662 334444444444333
Q ss_pred cCCccceeeeecccCchhhhhhhhHHH-HHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 046667 419 FGPNATTFVVPAEIFPARLRSTCHGIS-AASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497 (540)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (540)
........-|+.+.+|++..++...+. +...+++.++.+.+.|.+.| +.|++.+|++++.+.++..
T Consensus 327 ~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd-------------~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 327 PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD-------------RIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh-------------hcCcHHHHHHHHHHHHHHH
Confidence 222334456889999999999999886 57778999999999999995 7788889999888877777
Q ss_pred HHHH-hcccCC
Q 046667 498 LFTF-LVPESK 507 (540)
Q Consensus 498 ~~~~-~~~~~~ 507 (540)
++.. .+++++
T Consensus 394 li~~f~l~~~~ 404 (412)
T PF01306_consen 394 LISAFTLKKDK 404 (412)
T ss_dssp HHHHHHS--SS
T ss_pred HHheeeecCCC
Confidence 7666 444433
No 111
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=3.5e-18 Score=169.53 Aligned_cols=337 Identities=11% Similarity=-0.002 Sum_probs=201.1
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhh----cchhHH-HHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHh
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK----LGRKKV-YGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLG 138 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr----~Grr~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (540)
++++...|.+..+.-+.-++..|+.|.++|| +||||. ++++.+..+++.+++...++.+....+..+.+.-++..
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~ 120 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT 120 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 8999999999999999999999999999995 798755 55677888888777665554222222345566666778
Q ss_pred hccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH
Q 046667 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI 217 (540)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~ 217 (540)
++.......-.++..|..+ ++||.+..++...+..+|..+++.+...+....+.. ....+|+.
T Consensus 121 ~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~----------------~~~~g~~~ 184 (460)
T PRK11462 121 LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGD----------------NKPLGFQG 184 (460)
T ss_pred HHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------chhhhHHH
Confidence 8888888889999999997 889999999999999999988888877666544320 12346888
Q ss_pred HHHhhhHHHHHHHHHH-HhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhH
Q 046667 218 IVMVGALPAALTYYWR-MKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGL 296 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (540)
...+.+++.++..+.. ...+|.++. .+++ . +..+.++....++.++
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~~~~--~~~~--~-----------------------------~~~~~l~~~~~Nk~~~ 231 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKERVEA--PPTT--T-----------------------------SMREDLRDIWQNDQWR 231 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceeccCC--CccC--C-----------------------------CHHHHHHHHhCChHHH
Confidence 7777666665554433 334554321 0000 0 0001111111111112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~ 376 (540)
.+....+..........+...|...+. .+ .+. ..........+..+++.++++++.||+++|+..
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~--~g-~~~------------~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~ 296 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWI--LG-TPE------------VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhh--cC-ChH------------HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 222222222222222222222222221 11 000 111234455567778888999999999999887
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCc-------hhhhhhhhHHHHHHH
Q 046667 377 MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFP-------ARLRSTCHGISAASG 449 (540)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~ 449 (540)
..+..+..+..+++.+... .......+. .+..+++.....++.+++.+|..+ .+..|...+......
T Consensus 297 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~ 370 (460)
T PRK11462 297 WWTNALLAVISLAMFFVPM-----QASITMFVF-IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVL 370 (460)
T ss_pred HHHHHHHHHHHHHHHHhch-----hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHH
Confidence 6554443333332222110 111122222 222233333334555667777655 233455567777889
Q ss_pred HHhHHHHHHHHHHHhhccccc
Q 046667 450 KLGAIVGAFGFLYLAQSKDKT 470 (540)
Q Consensus 450 ~~g~~i~~~i~~~~~~~~~~~ 470 (540)
.+|..+++.+.|.+.+..|-.
T Consensus 371 Klg~alg~~i~g~iL~~~Gy~ 391 (460)
T PRK11462 371 KLGLAFGGALIGWMLAYGGYD 391 (460)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999876543
No 112
>PRK09848 glucuronide transporter; Provisional
Probab=99.83 E-value=5.8e-18 Score=168.59 Aligned_cols=341 Identities=10% Similarity=0.012 Sum_probs=189.4
Q ss_pred HHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc----chhHHH-HHHHHHHHHHHHHhhccC
Q 046667 45 VTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL----GRKKVY-GMTLMLMVICSIASGLSF 119 (540)
Q Consensus 45 ~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~----Grr~~~-~~~~~~~~i~~~~~~~~~ 119 (540)
..+.+.+.+ +++..+.|.+.++..+..++..++.|+++||. ||||.. .++.+...+..++....+
T Consensus 31 l~~y~~~~~----------gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 100 (448)
T PRK09848 31 LLSYYTDVA----------GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP 100 (448)
T ss_pred HHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence 345666666 89999999999999999999999999999986 777754 556555554444432212
Q ss_pred -CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHH-----HHHHHHHHHHHHHHHhhh
Q 046667 120 -GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGF-----GILAGGIFALIVSSAFNA 192 (540)
Q Consensus 120 -~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~-----G~~~g~~~~~~l~~~~~~ 192 (540)
..+.......+++.-++.+++.+...+...++..|..+ +++|.+..++-..+.++ |..++|.++... +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~----g~ 176 (448)
T PRK09848 101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS----PE 176 (448)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 10001112334455567788778888777888787775 46788877766554443 333344333321 10
Q ss_pred ccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH-HHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhh
Q 046667 193 AFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY-WRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQK 271 (540)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (540)
....+|.....+.++.+++..+ .....||+++. ..++ +. ..
T Consensus 177 -----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~--~~~~--~~----~~------------- 218 (448)
T PRK09848 177 -----------------EMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR--IVAQ--PS----LK------------- 218 (448)
T ss_pred -----------------chhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC--CccC--CC----HH-------------
Confidence 0011122222222222222222 22334554321 0000 00 00
Q ss_pred hhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHH
Q 046667 272 IQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTL 350 (540)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (540)
......++++. +.......++....+.......+.++++ .+..+ ..+.+...
T Consensus 219 --------~~~~~l~~n~~-------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~ 271 (448)
T PRK09848 219 --------ISLQTLKRNRP-------LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTG------------LFTVLVLV 271 (448)
T ss_pred --------HHHHHHhCCch-------HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChH------------HHHHHHHH
Confidence 00011112221 2222222222223333333333333322 12111 12323334
Q ss_pred HHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeec
Q 046667 351 IALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPA 430 (540)
Q Consensus 351 ~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (540)
...++.+++.++.+++.||+|+|+.+..+.++..++.+.+.+... ...+......+..+.+.....+..+++.+
T Consensus 272 ~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~------~~~~~~~~~~~l~g~G~~~~~~~~~al~~ 345 (448)
T PRK09848 272 QNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSV------WSLPVALVALAIASIGQGVTMTVMWALEA 345 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566778889999999999999999888877776665543221 12222223233333444444566777777
Q ss_pred ccCchh-------hhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 046667 431 EIFPAR-------LRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKT 470 (540)
Q Consensus 431 ~~~p~~-------~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~ 470 (540)
|..|.+ .+|...|+.+....+|..+++.+.+.+.+..|.+
T Consensus 346 ~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 346 DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 877654 4599999999999999999999999998876653
No 113
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.80 E-value=1.2e-18 Score=165.78 Aligned_cols=415 Identities=16% Similarity=0.165 Sum_probs=243.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc
Q 046667 17 TQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G 96 (540)
.++.+|+.+.++.+..++.....+.+.+..-...+++ |.+.+.+..|++.++..++.+++++..|++..|.+
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l--------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL--------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhc--------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccC
Confidence 3445677888888888888887766655543333333 23778889999999999999999999999999998
Q ss_pred h-hHHHHHHHHHHHHHHHHh-hccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHH
Q 046667 97 R-KKVYGMTLMLMVICSIAS-GLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (540)
Q Consensus 97 r-r~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~ 174 (540)
. |+.++.|.++..+++++. ++... ..++.+.++++|++.|+|.| ......+|+++....++|.|+++....+..+
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~--~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYV--PNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhc--ccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 7 889999999999999998 33322 11237899999999999955 5688999999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCC-CCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHH
Q 046667 175 GILAGGIFALIVSSAFNAAFKAPA-YEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQ 252 (540)
Q Consensus 175 G~~~g~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~ 252 (540)
|.++||.++..+............ ... .-+-.+-|+.++..++.+++ .++++|.++.. .+++.++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~-----------n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~--~~~~~~~ 243 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIF-----------NMYTAPAWLMAILWIIYIVIILFFFKEVYRGI--IDKKKRS 243 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceE-----------EecchHHHHHHHHHHHHHHHHHhheeecccCc--ccccccc
Confidence 999999999888654321100000 000 01345566667766665554 46678776541 1111000
Q ss_pred HHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCc
Q 046667 253 AASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYS-QNLFQKDIFSAVGWIPS 331 (540)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~ 331 (540)
. ++++.+.++ .+.++ ..+...+.+.+..+...+.+.. .....+......+|..+
T Consensus 244 ~------------~~~~~~~~~-----------~~~~~--~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~ 298 (488)
T KOG2325|consen 244 V------------EEEKSDIEK-----------VKKPK--LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGS 298 (488)
T ss_pred c------------hhhccchhh-----------hccCC--hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccc
Confidence 0 000000000 01111 1112334444444544444444 33444445555677666
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH-hhccchhHHHHHHHHHHHHHHHHHhcccccccC----------
Q 046667 332 AKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFI-DKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK---------- 400 (540)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 400 (540)
+.-. ...+.....++..+.-.+...... .++.+|..+..+++....+..+..........+
T Consensus 299 ~av~--------~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~ 370 (488)
T KOG2325|consen 299 EAVL--------YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAG 370 (488)
T ss_pred hHHH--------hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccC
Confidence 5221 112222222222222222222222 333445555555454444444443332211100
Q ss_pred --------------CchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhc
Q 046667 401 --------------SNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQS 466 (540)
Q Consensus 401 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~ 466 (540)
...+.+.+...+..+...-.......++-+|+..++.++++.|+....+.++..++|.+...+..
T Consensus 371 ~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~- 449 (488)
T KOG2325|consen 371 CDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT- 449 (488)
T ss_pred cCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHH-
Confidence 00111111111111111111122234556788889999999999999999999999999888874
Q ss_pred cccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 467 KDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
..|++..+.+.++..++...++.
T Consensus 450 ------------~~g~~~v~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 450 ------------LSGPRPVWIILLCLLLVVAALWI 472 (488)
T ss_pred ------------hcCccHHHHHHHHHHHHHHHHHH
Confidence 45667666665555554444443
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=6.7e-17 Score=148.54 Aligned_cols=377 Identities=13% Similarity=0.105 Sum_probs=246.0
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHH-HHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKV-YGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
.-+.+..+...++..+..++.+|+.|.++|+.|+||. +-....+..+++++..++++. ..++..++.-.+..++..
T Consensus 54 ~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~---s~~~~~l~~~il~~i~~~ 130 (438)
T COG2270 54 ASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG---SYLLLLLLFLILASIGFE 130 (438)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHHHhcc
Confidence 3455788999999999999999999999999997655 555666667777777777661 126777788888999999
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
.......+++.+..++++-++..++-.....+|..+.-++........+.. ..+. ...+..+.....-|..+.+.
T Consensus 131 ~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~-~~~~----~l~~l~~~~~~~~ri~~~l~ 205 (438)
T COG2270 131 FSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQT-GITI----ILLGLPPADGEDVRITGLLA 205 (438)
T ss_pred hhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhccccc-ceeE----EeeccCccccccchhHHHHH
Confidence 999999999999999999999988887777788777666543332221100 0000 01111123344578888886
Q ss_pred hHHHHH-HHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHH
Q 046667 223 ALPAAL-TYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGT 301 (540)
Q Consensus 223 ~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
++.-++ .+.+++..+|.++- .....+......++. ++.+++...++. +...
T Consensus 206 A~W~li~~iPm~~~v~~~~~~---~~~~~~~l~~g~k~L----------------------~~t~k~i~~~~~---i~~F 257 (438)
T COG2270 206 ALWWLLFALPMILNVHDAEKI---SSPPPTALRNGFKEL----------------------KSTFKEIRGRKN---LVLF 257 (438)
T ss_pred HHHHHHHHhHHHhcccccccc---cccchHHHHHHHHHH----------------------HHHHHHHhcccc---hHHH
Confidence 665554 44455666665532 000000000000000 011112212221 2222
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHH
Q 046667 302 TSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGF 380 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~ 380 (540)
....+...-+......+...+-. .+||+..+... ..+...+..++|+++.|++.||+|.|+++..+.
T Consensus 258 LiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll------------~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l 325 (438)
T COG2270 258 LIARFFYIDGVNTILAMGGVFGAADLGLSSTELLL------------IGIALSVVAALGAIIAGFLDERFGSKPVLMIGL 325 (438)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH
Confidence 23333333333334444444444 46776655332 566667778899999999999999999888888
Q ss_pred HHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 381 FFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
++..+..+...+... .....+..+..+.+..+.+...-++..+.+|+++.+...|+++..++.+..++|+..
T Consensus 326 vi~~~~~~~~~~~~~--------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 326 VILSIAALYLIFLEG--------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHHccc--------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 777666655554431 222334444455555666778889999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 046667 461 LYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKG 508 (540)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (540)
+.+.+.++ ..+..+....++.+++.+..+.+|..++
T Consensus 398 ~v~t~iTg------------~~r~g~~~i~vll~iGl~~L~~v~~~~~ 433 (438)
T COG2270 398 AVITQITG------------SSRAGVLSIIVLLLIGLLLLLRVKVPGR 433 (438)
T ss_pred HHHHHHhc------------chhhHHHHHHHHHHhhHhhEEeecCCCC
Confidence 99998777 3466677777777777777666665533
No 115
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.78 E-value=6.7e-17 Score=160.17 Aligned_cols=404 Identities=12% Similarity=0.132 Sum_probs=263.6
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
.+.++++..+.+++....+...+..+.+.| +++.++.|++.+.+-++..+...+..+..-|.-|-+++-+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF----------~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~ 167 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRF----------KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGI 167 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhc----------CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeee
Confidence 455566667788887788888999999999 9999999999999999999999999999999989899999
Q ss_pred HHHHHHHHHHHhhccC------------------CC---------------------Cc----c---hhhHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSF------------------GN---------------------SP----K---GVMATLCFFRFWL 137 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~------------------~~---------------------~~----~---~~~~~l~~~r~l~ 137 (540)
|+++++++++++++-+ +. .. . ..+..++++.++.
T Consensus 168 G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~ 247 (735)
T KOG3626|consen 168 GLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLL 247 (735)
T ss_pred chhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHh
Confidence 9999999999987641 00 00 0 0244778899999
Q ss_pred hhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cC-CCCCCCCCccccCCCCCc--
Q 046667 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAA-FK-APAYEDDPIASTAPQADY-- 213 (540)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~-- 213 (540)
|+|....++...+|+-|...+++-+..+|+......+|.++|.++++++..+..+. .. ......|| .|
T Consensus 248 GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DP--------rWIG 319 (735)
T KOG3626|consen 248 GIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDP--------RWIG 319 (735)
T ss_pred hcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCc--------chhh
Confidence 99999999999999999999999999999999999999999999999998876543 11 11122222 22
Q ss_pred chHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhh
Q 046667 214 LWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRR 293 (540)
Q Consensus 214 gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (540)
.|..-|++.+.+.++..+.++++|...+.. +++ .+...... .+++.+ ..++.....++.++..+.-+..-
T Consensus 320 AWWlGFLi~g~~~~~~a~p~f~fPk~lp~~--~~~-~~~~~~~~---~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll 389 (735)
T KOG3626|consen 320 AWWLGFLICGALLLFSAVPLFFFPKELPKS--QKR-KRARDLHV---LKTESG----GAKSDKTFGKKIKDFPKSIKRLL 389 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccCccc--ccc-chhhhhcc---cccccc----cccCCcchhhhHHHHHHHHHHHh
Confidence 366667777777777777778888664421 110 00000000 000000 00000000011111111111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc
Q 046667 294 HGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR 372 (540)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~ 372 (540)
..+.++...+...+....+.+...|+|.|++. .|.++.. ...+.......+..+|.+++|++.+|+..
T Consensus 390 ~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~-----------An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 390 SNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASL-----------ANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred cCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH-----------HHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 22355666777777788889999999999986 4444433 22333344555566777899999999853
Q ss_pred --hhHHHHHHHHHHHHHHH---HHhccc------------------cccc------C-----------------------
Q 046667 373 --FAIQMMGFFFMTVFMFA---LAIPYD------------------HWTH------K----------------------- 400 (540)
Q Consensus 373 --r~~~~~~~~~~~~~~~~---~~~~~~------------------~~~~------~----------------------- 400 (540)
|....+..+...+.++. ..+... .... .
T Consensus 459 ~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~S 538 (735)
T KOG3626|consen 459 SARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFS 538 (735)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeC
Confidence 44444433333333322 221110 0000 0
Q ss_pred -------------------------C--------------------chhHHHHHHHHHHHHhhcCCccceeeeecccCch
Q 046667 401 -------------------------S--------------------NRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435 (540)
Q Consensus 401 -------------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (540)
. ....++++..+..++...+.. ..+.++...+|+
T Consensus 539 pChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~-p~~~i~LR~V~~ 617 (735)
T KOG3626|consen 539 PCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAV-PGMLIVLRCVPP 617 (735)
T ss_pred hhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccC-cceEEEEEccCc
Confidence 0 112233333333334444433 455677889999
Q ss_pred hhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhcc
Q 046667 436 RLRSTCHGISAASGKL-GAIVGAFGFLYLAQSK 467 (540)
Q Consensus 436 ~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~ 467 (540)
|.|..++|+..++.++ |.+-+|+++|+++|.+
T Consensus 618 e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 618 EEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred hhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 9999999999877765 8899999999999953
No 116
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.77 E-value=1.4e-16 Score=149.18 Aligned_cols=287 Identities=15% Similarity=0.056 Sum_probs=180.3
Q ss_pred hHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccc
Q 046667 127 MATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIAS 206 (540)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (540)
++.+++.-|+.|.|.+...+....++++..|++++.+.+++.++..++|..++|++++.+....... .+..++
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~-------~~~~~~ 82 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGD-------LSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcc-------hhhhhh
Confidence 8999999999999999999999999999999999999999999999999999999999887432100 000000
Q ss_pred cCCCCCcchHHHHHhhhHHHHHHHHHHHh--CCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccc
Q 046667 207 TAPQADYLWRIIVMVGALPAALTYYWRMK--MPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYG 284 (540)
Q Consensus 207 ~~~~~~~gwr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (540)
....+...|+++|++.+...++..+.+.+ +||.++. +.++. .+ ++..+..+
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~------~~~~~-------------------~~--~~~~~~~~ 135 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEA------DVARV-------------------SS--GDTTQKTS 135 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc------ccccc-------------------cc--ccccchhh
Confidence 00011246999999655544443333333 3442111 00000 00 00000001
Q ss_pred hhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---cCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHH
Q 046667 285 LFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAV---GWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYW 361 (540)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (540)
.+++ +.++...+..++......+...|.+.++.+. |+++.+ +.........+..+|++
T Consensus 136 ~~~~-------~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------------a~~~~s~~~~~~~iGr~ 196 (310)
T TIGR01272 136 AFQF-------THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------------AAHFTAYTWGGAMVGRF 196 (310)
T ss_pred HHhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------------HHHHHHHHHHHHHHHHH
Confidence 1111 1223334444444445666677788887642 444433 33366777778889999
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhh
Q 046667 362 FTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTC 441 (540)
Q Consensus 362 ~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 441 (540)
+++++.||+++|+.+..+..+..++..++.... .... .. ..+..+++.....|...+...+..|++ .+++
T Consensus 197 ~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~-------~~~~-~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~a 266 (310)
T TIGR01272 197 IGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH-------GYVA-MW-FVLALGLFNSIMFPTIFSLALNALGRH-TSQG 266 (310)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-------CHHH-HH-HHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhh
Confidence 999999999999888777766666554443322 1111 11 222334444455677777777877764 5667
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHH
Q 046667 442 HGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLG 490 (540)
Q Consensus 442 ~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 490 (540)
.++. ..+.+|+.+.|.+.|.+.| ..|.+.++++..
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad-------------~~g~~~a~~v~~ 301 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLAD-------------CLGIQLAFALPV 301 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHH-------------hccchHHHHHHH
Confidence 7775 6788999999999999985 456677766433
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.75 E-value=5.3e-16 Score=146.08 Aligned_cols=392 Identities=13% Similarity=0.074 Sum_probs=230.0
Q ss_pred CCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHHHHHHhhccC--CCCcchhhHHHHHHHHHHhh
Q 046667 63 GSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVICSIASGLSF--GNSPKGVMATLCFFRFWLGF 139 (540)
Q Consensus 63 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~ 139 (540)
+++++++..-+.++|..-.-+..+++||++||+ |+|+++..|.++..+|.++.+.+. . ...+.++-.+.++
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~------~~gl~i~L~~I~i 129 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG------PGGLYIGLALIIV 129 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc------ccHHHHHHHHHHh
Confidence 469999999999999998899999999999996 999999999999999999999985 4 5788888899999
Q ss_pred ccccchhhHHHHHhhhcCcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH
Q 046667 140 GIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI 217 (540)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~ 217 (540)
|.|..-+...++++|.+|++ +|...++++.++.++|..++|++.+++.. ..||..
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~-----------------------~~g~~~ 186 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI-----------------------NYGWHV 186 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH-----------------------hhCHHH
Confidence 99999999999999999854 47788899999999999999999999964 455999
Q ss_pred HHHhhhHHHHHHHHHHHhCCC----ChhhHHHhhccHHHHHHHHHH----HHhhh--chhhHhhhh-----------h-h
Q 046667 218 IVMVGALPAALTYYWRMKMPE----TARYTALVAKNAKQAASDMSK----VLQVE--LEAEEQKIQ-----------E-L 275 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~~~~~e----sp~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~-----------~-~ 275 (540)
.|...++-..+.++..+..+. ++........+..+....... ..... .....+... . .
T Consensus 187 gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~ 266 (498)
T COG3104 187 GFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIY 266 (498)
T ss_pred HHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988877766655444331 110000001111111110000 00000 000000000 0 0
Q ss_pred hcccCCccchh-hHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHh
Q 046667 276 DRDKGNGYGLF-SKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALC 354 (540)
Q Consensus 276 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (540)
-.+.....+.. .+++.....+.++...+.|.+..-.......|.....+. ++.. ...+. +. .-....+
T Consensus 267 ~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~-~~~g--~~vp~-------~~-fQslNp~ 335 (498)
T COG3104 267 FAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNR-QIFG--FEVPP-------AW-FQSLNPF 335 (498)
T ss_pred HHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcc-cccc--eecCH-------HH-HHhhCHH
Confidence 00000000000 111111111122222233333222222222333222221 1000 00100 11 2233333
Q ss_pred hhhhhHHHHHHHHhhccch-------hHHHHHHHHHHHHHHHHHhcccccc--cCCchhHHHHHHHHHHHHhhcCCccce
Q 046667 355 STVPGYWFTVAFIDKIGRF-------AIQMMGFFFMTVFMFALAIPYDHWT--HKSNRLGFVIIYSLTFFFANFGPNATT 425 (540)
Q Consensus 355 ~~~~~~~~~~~l~d~~g~r-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (540)
..++..++..++..|.+++ .-+-++..+++.+++++........ ....+.++.+...++..++.....|+.
T Consensus 336 ~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvG 415 (498)
T COG3104 336 FIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHH
Confidence 4444555666666664332 1234556666666666655421111 223455666777777788899999999
Q ss_pred eeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 426 FVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
.+++....|+...+..+++.......+..++..+.+.-.. ++ + ..+.......|..++...++..+..+
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~-----~-~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD-----P-AYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cc-----h-hhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999988888888777666666666655552211 00 0 01233455667777777666665555
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.71 E-value=1.1e-18 Score=173.47 Aligned_cols=402 Identities=14% Similarity=0.138 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHH
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLML 107 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~ 107 (540)
.++..+.+....+.+...+..+++.| +++.++.|++.+.+-++..+..++..++.+|..|-|++-+|.++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF----------~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~ 77 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRF----------GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALL 77 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHH
Confidence 33444445666677788899999999 99999999999999999999999999999998888999999999
Q ss_pred HHHHHHHhhccC----CCC----------------------------------------cchhhHHHHHHHHHHhhcccc
Q 046667 108 MVICSIASGLSF----GNS----------------------------------------PKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 108 ~~i~~~~~~~~~----~~~----------------------------------------~~~~~~~l~~~r~l~G~~~g~ 143 (540)
++++++++++=+ .|. ....+..++++.++.|+|...
T Consensus 78 ~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~p 157 (539)
T PF03137_consen 78 MGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATP 157 (539)
T ss_dssp --------------------------------------------------------------------------SSS---
T ss_pred HHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccC
Confidence 999999876421 100 011357789999999999999
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC--CCCCCCccccCCCCCcc----hHH
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAP--AYEDDPIASTAPQADYL----WRI 217 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~g----wr~ 217 (540)
.++...+|+-|..++++-+.++|+..+...+|.++|.++++.+.+...+....+ ...++ .++.. |-.
T Consensus 158 l~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~-------p~dp~WvGAWWL 230 (539)
T PF03137_consen 158 LYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGIT-------PSDPRWVGAWWL 230 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCC-------CCCccHHHHHHH
Confidence 999999999999999999999999999999999999999999887654322111 11111 12222 444
Q ss_pred HHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhh---hhhhhcccCCccchhhHHHhhhh
Q 046667 218 IVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQK---IQELDRDKGNGYGLFSKEFLRRH 294 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 294 (540)
-|++.+...++..+.++++|+..+.....++.++..+++..+...++.+++... .+..++-.+..+++++++
T Consensus 231 Gfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np----- 305 (539)
T PF03137_consen 231 GFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNP----- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcCh-----
Confidence 555555555555555566665432210000000000000000000000000000 000111112222333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccc-
Q 046667 295 GLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGR- 372 (540)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~- 372 (540)
.++...+..........+...|.|.+++. .+.++.. .+.+.......+..+|.+++|++.+|++-
T Consensus 306 --~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~-----------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 306 --VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ-----------ASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-----------HHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 34445555555666777888899988876 4444333 23334444555667888899999999853
Q ss_pred -hhHHHHHHHHHHHHHHH---HHhcc-----------ccc----ccC-----------------------------Cchh
Q 046667 373 -FAIQMMGFFFMTVFMFA---LAIPY-----------DHW----THK-----------------------------SNRL 404 (540)
Q Consensus 373 -r~~~~~~~~~~~~~~~~---~~~~~-----------~~~----~~~-----------------------------~~~~ 404 (540)
|..+....+...+..+. ..+.. .+. ... ....
T Consensus 373 ~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~ 452 (539)
T PF03137_consen 373 ARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLI 452 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccH
Confidence 44443333333333222 11100 010 000 0112
Q ss_pred HHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhh
Q 046667 405 GFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQ 465 (540)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~ 465 (540)
.+++...+...+......| ...+.-..+|+++|+.+.|+...+.++ |.+-+|+++|.+.|
T Consensus 453 ~Fl~~~~~~~~~~~~~~~p-~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 453 PFLILLFILSFFTFMSQVP-STLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcccc-hheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 2222222333333333333 334566889999999999999888765 88999999999997
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.67 E-value=4.4e-15 Score=149.43 Aligned_cols=170 Identities=14% Similarity=0.042 Sum_probs=126.2
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHH-h--hccCCCCcchhhHHHHHHHHHHhhc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIA-S--GLSFGNSPKGVMATLCFFRFWLGFG 140 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~-~--~~~~~~~~~~~~~~l~~~r~l~G~~ 140 (540)
+.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. . ..+++ ...++++|++.|++
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~ 355 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV------IGLIFAGLLMLAVI 355 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHH
Confidence 778878888888899999999999999999999999988877654443332 2 22333 57778899999988
Q ss_pred cccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHH
Q 046667 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVM 220 (540)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~ 220 (540)
.+........++.|.+|++.|++.+++......++..++|.+.+++.+..+ +|+.+++
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~----------------------~~~~~~~ 413 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ----------------------NLMMPAY 413 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------------------CchHHHH
Confidence 777777888899999999999999997554455666778888777754322 2787777
Q ss_pred hhhHHHHHHHHHHHhCCCChhhHHHh----hccHHHHHHHHHHHH
Q 046667 221 VGALPAALTYYWRMKMPETARYTALV----AKNAKQAASDMSKVL 261 (540)
Q Consensus 221 ~~~~~~~~~~~~~~~~~esp~~~~~~----~~~~~~~~~~~~~~~ 261 (540)
+..+++++.++..+++||+|+++..+ +++.+|+.+.+.+.+
T Consensus 414 ~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 414 YLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 76666776666667789999985322 245566666666654
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.63 E-value=5.5e-13 Score=123.53 Aligned_cols=365 Identities=14% Similarity=0.102 Sum_probs=213.6
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc-----hhHHHHH-HHHHHHHHHHHhhcc-----C---CCCcchhhH-
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG-----RKKVYGM-TLMLMVICSIASGLS-----F---GNSPKGVMA- 128 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G-----rr~~~~~-~~~~~~i~~~~~~~~-----~---~~~~~~~~~- 128 (540)
+++....+.+.+...+. ....+.+|+.+|+.+ ||..+++ |..+...+..+.+++ . ..+.....+
T Consensus 11 ~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~ 89 (403)
T PF03209_consen 11 GVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGL 89 (403)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHH
Confidence 78888888888888876 456999999999998 8866544 666655555544432 2 000111122
Q ss_pred -HHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccc
Q 046667 129 -TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIAST 207 (540)
Q Consensus 129 -~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 207 (540)
...+.-.+.|+|.+...+...+++.|..|+++|+++.++......+|.+++..+.+.+.+.+..
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~--------------- 154 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP--------------- 154 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH---------------
Confidence 4556678899999999999999999999999999999999999999999999998887643321
Q ss_pred CCCCCcchHHHHHhh--hHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccch
Q 046667 208 APQADYLWRIIVMVG--ALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGL 285 (540)
Q Consensus 208 ~~~~~~gwr~~f~~~--~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (540)
-|..-.+. ++..+...++..+-.|++... .. +. .++++....+.
T Consensus 155 -------~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~-~~-~~-------------------------~~~~~~~f~~a 200 (403)
T PF03209_consen 155 -------ERLIQVIQGVALIALLLNLIALWGQEPRRSR-RA-AA-------------------------AERPRPPFREA 200 (403)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHhcccCCcc-cc-cC-------------------------CCCCCccHHHH
Confidence 23322332 222222222223333432210 00 00 00000111111
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 046667 286 FSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQ-KDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTV 364 (540)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (540)
+++-...++.+.++ ...+.....++.....+ |+--+-+|.++.+. .-.+.....+.++|....+
T Consensus 201 ~~~~~~~~~a~~f~---~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eT------------T~Lta~~~~G~L~G~~~~g 265 (403)
T PF03209_consen 201 WRQVWASPQARRFF---VFLFLGTLAFFMQDVILEPYGGEVFGMSVGET------------TRLTAFWGGGTLLGMLLAG 265 (403)
T ss_pred HHHHHhCCChhHHH---HHHHHHHHHHHhhHHHcCCchhHHcCCCHHHH------------HHHHHHHHHHHHHHHHHHH
Confidence 11111111111221 12222233444443322 22222345554442 2256666677777777777
Q ss_pred HHHh-hccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhH
Q 046667 365 AFID-KIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHG 443 (540)
Q Consensus 365 ~l~d-~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 443 (540)
++.. |.++++...+++....+++.++...... .+.+.+.... +..+++......-..+...+..+++..|+.+|
T Consensus 266 ~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~----~~~~~~~~~~-~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 266 FLLSRRLGKKRTAALGCLLGALAFALIILAGPL----GSPWLFRPGV-FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc----ccchHHHHHH-HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHH
Confidence 7766 6777777778888777777666554421 1222222222 22222222222222344567777888999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 444 ISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 444 ~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
.....+.+...++..+.|.+.|....-... ....+|..+|.+=+++.+++..+..
T Consensus 341 ~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~---~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 341 AWGAAQAIARGLGTFLGGALRDLVRALFGN---SPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988754321110 1345788888877777777766555
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=1.2e-13 Score=133.92 Aligned_cols=370 Identities=11% Similarity=0.081 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHH
Q 046667 22 FTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVY 101 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~ 101 (540)
+.+.....+-.+..++.........+.....+..+.. ..+....+.......+...+.++..|.++||+|||..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~-----~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L 95 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQ-----LENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVL 95 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCcc-----chhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhH
Confidence 3444555555666666665556666665554411100 11111222222244667789999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhc--cccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFG--IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
...++...+..++..+... |.++ +.|+. .+.......++++|....++|....++.......+..++
T Consensus 96 ~~~~~~~~l~~~~~~~~~~-------~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~ 164 (463)
T KOG2816|consen 96 LLPLFGTILPALCLLFQGY-------WFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG 164 (463)
T ss_pred HHHHHHHHHhHHHHHHHHH-------HHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH
Confidence 9999998888887777652 4444 33332 245577888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhhHHHhhccHHHHHHHHH
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARYTALVAKNAKQAASDMS 258 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (540)
|.+++.+....+ .-.+|.+..+..++..+. .+++||+... +.+++ ....
T Consensus 165 p~~~~~~~~~~~-----------------------~a~~f~ia~~~~~~~~~y~~~~l~Esl~~-----~~~~~--~~~~ 214 (463)
T KOG2816|consen 165 PALGGYLVKFLG-----------------------IALVFLIAAASGILSLLYMLLFLPESLQE-----KERSD--ATLR 214 (463)
T ss_pred HHHHHHHHHhcC-----------------------chHHHHHHHHHHHHHHHHHhhccccccCc-----ccccc--cccc
Confidence 999999965433 667888877777765554 5778987543 11110 0000
Q ss_pred HHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHH-HhcCCCcccchh
Q 046667 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYS-QNLFQKDIFS-AVGWIPSAKTMN 336 (540)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~ 336 (540)
+.. ..+..........+..++. +..+..+.+....+.......+ ..-..+.+.. ..+|.+...
T Consensus 215 ~~~---------~~~~~~~~~~~~~~~~~~~---~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~--- 279 (463)
T KOG2816|consen 215 ELT---------PGSLDSSHVADAFQSLTKV---GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEF--- 279 (463)
T ss_pred ccC---------CCcccchhhhhhhhhhccc---CCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHH---
Confidence 000 0000000000001111111 1111222222222211111110 0000011111 145554442
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667 337 AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFF 416 (540)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (540)
+........+..+.-.+..+.+...+|-|+....|.....+......+.... | .+....+. ..
T Consensus 280 --------s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~-------w-~~~~~~v~-~~ 342 (463)
T KOG2816|consen 280 --------SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATET-------W-MMFAAGVV-VA 342 (463)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccc-------h-hhhHHHHH-HH
Confidence 2223333333323223344578888998888888888888888888887631 2 22222222 22
Q ss_pred hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 046667 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDK 469 (540)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~ 469 (540)
......|...+..+...+++.+|++.++...+..+...++|.+.+.+...+..
T Consensus 343 ~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 343 LAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred hhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 33344567778888899999999999999999999999999999999766553
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.56 E-value=3e-14 Score=117.59 Aligned_cols=138 Identities=23% Similarity=0.297 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHH
Q 046667 72 AVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATI 151 (540)
Q Consensus 72 ~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 151 (540)
++.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++ ++.+.+.+++.|++.+...+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN------ITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3455677889999999999999999999999999999999988888877 6889999999999999999999999
Q ss_pred HhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH
Q 046667 152 MSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY 231 (540)
Q Consensus 152 i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 231 (540)
+.|.+|+++|++..++.+....+|..+++.+.+.+.+ ..+|++.+++.++..++..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ-----------------------FLGWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc-----------------------ccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998853 34599999987776666554
Q ss_pred HH-HhCCC
Q 046667 232 WR-MKMPE 238 (540)
Q Consensus 232 ~~-~~~~e 238 (540)
.. +..||
T Consensus 133 ~~~~~~~~ 140 (141)
T TIGR00880 133 LLAFLLPE 140 (141)
T ss_pred HHhhcCCC
Confidence 44 44454
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.56 E-value=2.1e-13 Score=140.21 Aligned_cols=141 Identities=14% Similarity=0.097 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHH
Q 046667 71 AAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSAT 150 (540)
Q Consensus 71 g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 150 (540)
.+...+..++..++.++.|+++||+|||++++++.+++++++++.++.++ ...+++.+++.|++.++.++...+
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s------~~~ll~~~~l~g~~~~~~~~~~~a 671 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS------ESAMIALLCLFGGLSIAAWNALDV 671 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777899999999999999999999999999999999999998887 577888889999888889999999
Q ss_pred HHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHH
Q 046667 151 IMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTY 230 (540)
Q Consensus 151 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 230 (540)
+++|++|.++|++++|+..+...+|.++||.+++.+... +...+|++.++..+++.
T Consensus 672 ~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------------------------~~~~pf~i~a~~lll~~ 727 (742)
T TIGR01299 672 LTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------------------------TKAAPILFASAALACGG 727 (742)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------hhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999877532 14577777777777766
Q ss_pred HHHHhCCCChh
Q 046667 231 YWRMKMPETAR 241 (540)
Q Consensus 231 ~~~~~~~esp~ 241 (540)
++.+++||+..
T Consensus 728 ll~~~LPET~~ 738 (742)
T TIGR01299 728 LLALKLPDTRG 738 (742)
T ss_pred HHHHhCCCCcc
Confidence 66677898753
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=1.4e-13 Score=135.25 Aligned_cols=158 Identities=13% Similarity=0.035 Sum_probs=128.3
Q ss_pred CChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccc
Q 046667 65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGD 144 (540)
Q Consensus 65 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (540)
.+.++.+.+.++..++..++.++.|+++||+|||+++..+.++.+++..+....... ...++.+++.+++.|++.+..
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~--~~~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE--YFGYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc--hhhHHHHHHHHHHHHHHHHHH
Confidence 345778999999999999999999999999999999999999998887766664321 001456778899999999988
Q ss_pred hhhHHHHHhhhcCcccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 145 YPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
.+....++.|++|+++|+++.++.+ ...++|.++||++++.+.+..+. ....||+..|.+.+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~-----------------~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA-----------------YGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc-----------------ccCCchHHHHHHHH
Confidence 8999999999999999999999997 67889999999999999876542 12257999999877
Q ss_pred HHHHHHH-HHHHhCCCChh
Q 046667 224 LPAALTY-YWRMKMPETAR 241 (540)
Q Consensus 224 ~~~~~~~-~~~~~~~esp~ 241 (540)
+..++.. +..++++|+.+
T Consensus 389 ~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHhCCccc
Confidence 7666544 44566787754
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=2.3e-12 Score=126.12 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=120.4
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++ .+.+++.+++.+++.+.
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHS------PAILLGLQLLNAIYIGI 321 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHH
Confidence 789999999988888888889999999999999999888777666655555555555 57778899999888887
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
..+....+..|.+|+ +|+++.++.+....+|..+++.+++.+.+.. ||+..|++.+
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-----------------------g~~~~~~~~~ 377 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-----------------------NYHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------hhHHHHHHHH
Confidence 777888889999985 5899999999999999999999999986543 4999999988
Q ss_pred HHHHHHHHHHHhCCC
Q 046667 224 LPAALTYYWRMKMPE 238 (540)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (540)
++.++.++..++.||
T Consensus 378 ~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 378 VMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHhhcC
Confidence 888877777766665
No 126
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.48 E-value=1.8e-11 Score=119.94 Aligned_cols=395 Identities=14% Similarity=0.126 Sum_probs=215.3
Q ss_pred HHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc---c--hhHHHHHHHHHHHHHHHHhhc
Q 046667 43 SLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL---G--RKKVYGMTLMLMVICSIASGL 117 (540)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~---G--rr~~~~~~~~~~~i~~~~~~~ 117 (540)
....+.+.+++ ++++++...+.+...+...+ -++.|.++|.+ | ||+-++++.++.+++.+..+.
T Consensus 10 ~~~~~~l~~~l----------~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~ 78 (433)
T PF03092_consen 10 LAIYPFLKDDL----------GLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL 78 (433)
T ss_pred HHHHHHHHHHc----------CCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 45667788888 99999999998888887655 78889999976 3 445566677777666666665
Q ss_pred cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 046667 118 SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN--KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFK 195 (540)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 195 (540)
.+.. ..+.....+.-++..+|.+....++-+++.|... +++||...+.......+|.+++..+++.+.+.
T Consensus 79 ~~~~--~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~------ 150 (433)
T PF03092_consen 79 LPAS--ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS------ 150 (433)
T ss_pred cccc--cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc------
Confidence 4441 1124566667788888989999999999999984 44478888888889999999999999888543
Q ss_pred CCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCChhhHHHhhc-cHHHHHHHHHHHHhhhchhhHhhhh
Q 046667 196 APAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETARYTALVAK-NAKQAASDMSKVLQVELEAEEQKIQ 273 (540)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (540)
.++|..|.+.+++.++..+.. +..+|.++....... ..++........
T Consensus 151 -----------------~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~------------- 200 (433)
T PF03092_consen 151 -----------------FGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGS------------- 200 (433)
T ss_pred -----------------CCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHH-------------
Confidence 347888888666655544443 444442111000000 000000000000
Q ss_pred hhhcccCCccchhhHHHhhhhhHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHH
Q 046667 274 ELDRDKGNGYGLFSKEFLRRHGLHLLGTTS-TWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIA 352 (540)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (540)
.++.-...++.++.+. ++.... ..++.......... .. .-+.....+ ..+.+....+. ...+.
T Consensus 201 -~~~~~~~l~~~~~~~~-------i~~~~~~~~~~~~~~~~~~~a--~~----fy~~~~~~~-gp~fs~~f~~~-~~~vg 264 (433)
T PF03092_consen 201 -FREQLSELWRALQQRA-------IWQPILFFIFFFNLPPSISSA--SS----FYFQTDALG-GPHFSPSFYGT-LSIVG 264 (433)
T ss_pred -HHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHhccCCCCc--cE----EEEEecccc-ccccCHHHHHH-HHHHH
Confidence 0000001111222211 111111 11110000000000 00 000000011 00011111222 33555
Q ss_pred HhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc---CCchhHHHHHHHHHHHHhhcCCccceeeee
Q 046667 353 LCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTH---KSNRLGFVIIYSLTFFFANFGPNATTFVVP 429 (540)
Q Consensus 353 ~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (540)
.++.++|..+......+..-|+++....++..+..+.-......+.. -++.+..+.-..+.-........|. ..++
T Consensus 265 ~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~-lvl~ 343 (433)
T PF03092_consen 265 SIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPS-LVLA 343 (433)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHH-HHHH
Confidence 56666666666666666666777666555544433322211111100 0111111111222222222323333 3567
Q ss_pred cccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 046667 430 AEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKG 508 (540)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (540)
+|+.|+...|+..++..++.++|..++..+...+.+..+-++++ ..+.....++..++.++...+..++|+.++
T Consensus 344 a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~-----f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 344 ARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDD-----FSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc-----ccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 89999999999999999999999999999999999887743322 223445556666666666666657776543
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=8.6e-13 Score=130.51 Aligned_cols=149 Identities=9% Similarity=0.023 Sum_probs=124.4
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+..+.|++.++..++..++.+++|+++||+|||+.+..+.++.+++.++.+++++ .+.+++.+++.|++.+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~~ 331 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG------PLEVSILKLLHAFEVPF 331 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc------HHHHHHHHHHHHHHHHH
Confidence 466678899999999999999999999999999999999999999999888888887 68888999999999888
Q ss_pred chhhHHHHHhhhcCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
..+....++.|.+|++.|++..+. ++....+|.++++.+.+++.+. .||+..|.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----------------------~G~~~~f~~~ 388 (420)
T PRK09528 332 LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----------------------IGFQGTYLIL 388 (420)
T ss_pred HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----------------------hCchHHHHHH
Confidence 888888999999999999887655 5677889999999999999654 3499999987
Q ss_pred hHHHHHHHH-HHHhCCCChh
Q 046667 223 ALPAALTYY-WRMKMPETAR 241 (540)
Q Consensus 223 ~~~~~~~~~-~~~~~~esp~ 241 (540)
++..++..+ ..+..+++|+
T Consensus 389 ~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 389 GGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHHHHhcCCch
Confidence 666655443 3445555444
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.47 E-value=3.2e-12 Score=126.01 Aligned_cols=157 Identities=15% Similarity=0.060 Sum_probs=127.4
Q ss_pred HHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCC
Q 046667 43 SLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNS 122 (540)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 122 (540)
....|.+.++. +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++
T Consensus 240 ~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (406)
T PRK11551 240 LNWLPSLLVGQ----------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS-- 307 (406)
T ss_pred HHHHHHHHHhC----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc--
Confidence 33456666666 788999999999999999999999999999999999988877777777776666666
Q ss_pred cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 046667 123 PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDD 202 (540)
Q Consensus 123 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~ 202 (540)
.+.+.+.-++.|++.++..+...+++.|.+|+++|++..++.+....+|..++|.+++.+.+..
T Consensus 308 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~------------ 371 (406)
T PRK11551 308 ----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG------------ 371 (406)
T ss_pred ----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC------------
Confidence 5677778888998888888999999999999999999999999999999999999999986432
Q ss_pred CccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC
Q 046667 203 PIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP 237 (540)
Q Consensus 203 ~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 237 (540)
.+|...+++.....++..+..+++.
T Consensus 372 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 372 ----------RSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHHh
Confidence 2377777776666555555544443
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.45 E-value=1.5e-12 Score=127.02 Aligned_cols=139 Identities=16% Similarity=0.127 Sum_probs=119.5
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.++..+.++. ....+++..++.|++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~g~ 311 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML----NDVLFLATVALVFFTWGG 311 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc----hhHHHHHHHHHHHHHhcc
Confidence 7888899999999999999999999999999999999999999998888887776642 023455667888988888
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+. .||++.|++.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----------------------~g~~~~f~~~~ 368 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----------------------IGFEYTFIVTG 368 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----------------------hchhhHHHHHH
Confidence 8888889999999999999999999999999999999999998543 45999998877
Q ss_pred HHHHHH
Q 046667 224 LPAALT 229 (540)
Q Consensus 224 ~~~~~~ 229 (540)
+..++.
T Consensus 369 ~~~~~~ 374 (377)
T TIGR00890 369 AFALTS 374 (377)
T ss_pred HHHHHh
Confidence 766554
No 130
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=4e-12 Score=126.07 Aligned_cols=175 Identities=9% Similarity=0.038 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHH
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~ 378 (540)
+...+.++......+....+.|.+.++.|+++.+.+ .......++..++.++.|++.||+|||+.+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g------------~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~ 93 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIG------------LLATLFYITYGVSKFVSGIVSDRSNARYFMGI 93 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHH------------HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHH
Confidence 334444444444445566777888887777655422 25556667778888999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH
Q 046667 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF 458 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 458 (540)
+.++.+++.++..... +.+. +.+..+..++......+...+++.|.+|+++|++++|+.+....+|..++|.
T Consensus 94 ~~~~~~~~~~~~~~~~-------~~~~-l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 165 (434)
T PRK11663 94 GLIATGIINILFGFSS-------SLWA-FALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPL 165 (434)
T ss_pred HHHHHHHHHHHHHHHh-------HHHH-HHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888877666543 1222 2222222333333334566678899999999999999999999999999999
Q ss_pred HHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 459 GFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 459 i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
+.+.+. +.+||+..|++.+++.++..+... +++|+
T Consensus 166 ~~~~l~-------------~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 166 VVGAIA-------------LHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHH-------------HcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999998 357899999888777665544433 55553
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.44 E-value=6.2e-12 Score=121.37 Aligned_cols=143 Identities=23% Similarity=0.289 Sum_probs=130.7
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhH-HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKK-VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+.++.+.+++.+...++..++.++.|++.||+|||+ .+..+..+..++.++....++ .+.+.+..++.|++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~ 280 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS------LALLLVALLLLGFGLG 280 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999 999999999999999998887 6889999999999999
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
...+...+++.|..|+++|++.+++.+....+|..+++.+.+.+.+ ..+|+..+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-----------------------~~~~~~~~~~~ 337 (352)
T cd06174 281 FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-----------------------TGGYGGVFLIL 337 (352)
T ss_pred ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------------ccCcchHHHHH
Confidence 9999999999999999999999999999999999999999999853 45699999998
Q ss_pred hHHHHHHHHHHHh
Q 046667 223 ALPAALTYYWRMK 235 (540)
Q Consensus 223 ~~~~~~~~~~~~~ 235 (540)
++..++..+..++
T Consensus 338 ~~~~~i~~i~~~~ 350 (352)
T cd06174 338 AALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHhee
Confidence 8887776665443
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.44 E-value=8.5e-12 Score=122.69 Aligned_cols=141 Identities=19% Similarity=0.158 Sum_probs=119.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhH
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLS 148 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (540)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++.+++.|++.+...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~ 323 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS------PWMALIGAALTGFGFSLVFPAL 323 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHhHHHHHHHH
Confidence 4566677888899999999999999999999999998888888888887776 5778888999999999888888
Q ss_pred HHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHH
Q 046667 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAAL 228 (540)
Q Consensus 149 ~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 228 (540)
...+.|.+|+++|+++.++++....+|..+++.+.+.+.+. .||+..|++.++..++
T Consensus 324 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----------------------~g~~~~~~~~~~~~~~ 380 (399)
T PRK05122 324 GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----------------------FGYPSIFLAAALAALL 380 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999998888654 3499999988777777
Q ss_pred HHHHHHhCCC
Q 046667 229 TYYWRMKMPE 238 (540)
Q Consensus 229 ~~~~~~~~~e 238 (540)
..+..+++++
T Consensus 381 ~~~~~~~~~~ 390 (399)
T PRK05122 381 GLALTWLLYR 390 (399)
T ss_pred HHHHHHHhcc
Confidence 6665544544
No 133
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.42 E-value=1.8e-10 Score=105.34 Aligned_cols=184 Identities=16% Similarity=0.084 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 19 WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+.|+.-+.+-.++...+++. +|..-.+-+++ +.+..|++.+....+...++..++.|.++||+|||
T Consensus 34 ~Fqr~yl~vY~La~~aDWLQ----GpY~Y~LY~~y----------g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 34 RFQRKYLLVYLLAMAADWLQ----GPYLYALYESY----------GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhh----cchhHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 33444454555555555554 34444455566 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHH-hhhcCcccchhHHHH-HHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIM-SEYANKKTRGAFIAA-VFAMQGFGI 176 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i-~e~~~~~~r~~~~~~-~~~~~~~G~ 176 (540)
+.-+..+++.+++++.- ..++ ++.++++|++.|++....+.+--+++ .|.-..+.+....+- +....-++.
T Consensus 100 ~~cl~~cily~~scl~k-~~~~------~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n 172 (354)
T PF05631_consen 100 KACLLFCILYSLSCLTK-HSSN------YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGN 172 (354)
T ss_pred HHHHHHHHHHHHHHHHH-hccc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHh
Confidence 99999999999988654 4456 69999999999999998888888764 554322212122222 111111333
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCCh
Q 046667 177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETA 240 (540)
Q Consensus 177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp 240 (540)
.+..+.++.+.+..-+ ....|-..+|....+..++..++. ...+|..
T Consensus 173 ~~vAI~aGv~a~~l~~-----------------~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 173 GVVAIGAGVVANVLAD-----------------WFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHhHHHHHHHH-----------------HhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 3334444444433221 112234788888777766655543 4566654
No 134
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.7e-12 Score=118.38 Aligned_cols=179 Identities=12% Similarity=0.122 Sum_probs=133.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhcc
Q 046667 292 RRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIG 371 (540)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g 371 (540)
+.+...++.+.+.+....+.--.+..-.|.+.++.+++..+.+. ......+..-++-++.|.++||.+
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~------------i~s~f~i~YG~sKf~~G~~sDr~n 92 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGI------------LGSAFSITYGVSKFVMGVLSDRSN 92 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHhhhhcccCC
Confidence 33334555555555554444445666778888777777776544 455555566677789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH
Q 046667 372 RFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL 451 (540)
Q Consensus 372 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 451 (540)
.|+.+..++++.+++.+++++... ...+.++..+-+.+.+.+. |.+...+..-+|++.||+..++.|+..++
T Consensus 93 pr~fm~~gLilsai~nil~Gfs~s-------~~~~~~l~~lng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNi 164 (448)
T COG2271 93 PRYFMAFGLILSAIVNILFGFSPS-------LFLFAVLWVLNGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNI 164 (448)
T ss_pred CceeehHHHHHHHHHHHHHhhhhH-------HHHHHHHHHHHHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhc
Confidence 999999999999999999988662 2333444444444555555 55667788999999999999999999999
Q ss_pred hHHHHHHHH--HHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 452 GAIVGAFGF--LYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 452 g~~i~~~i~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
|+.+.|.+. +.+. .+.+|+..|++-++++++..++.+++
T Consensus 165 GGal~~~~~~la~~~-------------~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 165 GGALAPLVALLAFFA-------------FHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred ccchHHHHHHHHHHH-------------hccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 7777 46699999999999988887777743
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.40 E-value=1.3e-11 Score=121.88 Aligned_cols=136 Identities=21% Similarity=0.319 Sum_probs=118.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhH
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLS 148 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (540)
..+.+.++..++..++.++.|+++||+|||+.+..+..+..++.+...+.++ .+.+++.+++.|++.+...+..
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT------PLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhHhhHHHH
Confidence 4566777788888999999999999999999999998888888877777766 6888899999999999999999
Q ss_pred HHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHH
Q 046667 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAAL 228 (540)
Q Consensus 149 ~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 228 (540)
.+++.+..|+++||+.+++......+|..+||.+++.+.+ ..||++.|++.++..++
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~-----------------------~~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 333 QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA-----------------------NYGFRAVFLVTAGVVLF 389 (408)
T ss_pred HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh-----------------------hcchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999854 34599999998877777
Q ss_pred HHHHH
Q 046667 229 TYYWR 233 (540)
Q Consensus 229 ~~~~~ 233 (540)
..+..
T Consensus 390 ~~~~~ 394 (408)
T PRK09874 390 NAVYS 394 (408)
T ss_pred HHHHH
Confidence 65544
No 136
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=2e-11 Score=122.41 Aligned_cols=182 Identities=14% Similarity=0.019 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHh-hhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
++.+++..++............|. +.+++ +.+..+.++..+...++..++.+++|+++||+|||+.+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~ 329 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQEL----------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA 329 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 334444444444444444555664 45667 8999999999999999999999999999999999988766
Q ss_pred HHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHH-HHHHHH
Q 046667 104 TLMLMVICSIASG--LSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF-GILAGG 180 (540)
Q Consensus 104 ~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~-G~~~g~ 180 (540)
...+..++..+.. ..++ .+.+.+.+++.|++.............|.+|+++||++.|+.+....+ |..++|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~ 403 (467)
T PRK09556 330 CIALALIIFTLGVYQHATS------EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAK 403 (467)
T ss_pred HHHHHHHHHHHHHHHhcCc------HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHh
Confidence 5544444332222 2233 456678888888654444444446777999999999999999988886 778999
Q ss_pred HHHHHHHHH-hhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHH
Q 046667 181 IFALIVSSA-FNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRM 234 (540)
Q Consensus 181 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~ 234 (540)
.+.+.+.+. .+. +.. ......+|+..|++..+..++..+..+
T Consensus 404 ~~~G~i~~~~~~g----------~~~--~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 404 VGLGMIADPTKNG----------TPI--FGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hhHHHHhcccccc----------ccc--ccccccChHHHHHHHHHHHHHHHHHHH
Confidence 999998751 100 000 001135699999887666666554443
No 137
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.39 E-value=9.1e-12 Score=122.47 Aligned_cols=184 Identities=9% Similarity=-0.006 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~ 376 (540)
..+...+.+++............|.+.++.++++.+.+. ......++..++.++.|++.||+|||+.+
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~G~r~~~ 76 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGL------------AATLFYAAYVICGIPSNIMLAIIGARRWI 76 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHHhChHHHH
Confidence 344444444544444555555666666777777665332 55556667778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHH
Q 046667 377 MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVG 456 (540)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 456 (540)
..+.++..++..+..+... ...+.+.-+..+++..+..+....++.|.+|+++|+++.++.+....+|..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 77 AGIMVLWGIASTATMFATG--------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888877766441 22333333444444554556666788999999999999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 457 AFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 457 ~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
+.+.+++.+..+ ..+..||+..|++.++..++..++.+ ++||++
T Consensus 149 ~~~~~~l~~~~~-------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 149 LILSGYILALDG-------LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHhCCC-------CCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 999998874211 01246999999998877766555554 666654
No 138
>TIGR00895 2A0115 benzoate transport.
Probab=99.38 E-value=3.4e-12 Score=125.53 Aligned_cols=174 Identities=21% Similarity=0.236 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHH
Q 046667 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGF 380 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~ 380 (540)
.....+...........+.|.+.++.|+++.+. ........++.+++.++.|+++||+|||+.+..+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL------------GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH------------HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 333444444445555667777777766655442 22455566777888899999999999999999888
Q ss_pred HHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 381 FFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
.+.+++.++..... ......+..++.+++.....+...+++.|.+|++.|+++.++.+....+|..+++.+.
T Consensus 90 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 90 LLFSVFTLLCALAT--------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHHHHHcc--------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 88777776665543 1233333444444554555677788899999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 461 LYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
+.+.+ ..+|+..+++.+++.++..+..+ ++||+.
T Consensus 162 ~~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 162 GWLIP-------------VFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred HHHhh-------------cccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 99873 56788888877655555554444 566543
No 139
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.38 E-value=1.8e-11 Score=119.59 Aligned_cols=174 Identities=12% Similarity=0.107 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHH
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~ 378 (540)
....+..+......+......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~ 90 (394)
T PRK10213 23 FSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ------------SVTVTAFVAMFASLFITQTIQATDRRYVVIL 90 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccCcHHHHHH
Confidence 3333333333334444444567777787877665332 4445566677788899999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH
Q 046667 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF 458 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 458 (540)
+.++.+++.+...... + .....+.-+..++......+...+++.|.+|+++|+++.++......++..++|.
T Consensus 91 ~~~~~~~~~~~~~~~~-------~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 91 FAVLLTLSCLLVSFAN-------S-FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred HHHHHHHHHHHHHHHC-------h-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888777665543 2 2233333333344443345667778899999999999999999999999999999
Q ss_pred HHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hccc
Q 046667 459 GFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 459 i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (540)
+.+.+. +.++|+..|++.+++.+++.+... ..||
T Consensus 163 l~~~l~-------------~~~gw~~~f~~~~~l~~~~~l~~~~~~p~ 197 (394)
T PRK10213 163 LGSFLG-------------ELIGWRNVFNAAAVMGVLCIFWIIKSLPS 197 (394)
T ss_pred HHHHHH-------------hhcCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999998 467899999888777766554444 3454
No 140
>PRK12382 putative transporter; Provisional
Probab=99.38 E-value=3.2e-11 Score=118.28 Aligned_cols=136 Identities=17% Similarity=0.187 Sum_probs=117.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHH
Q 046667 70 SAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSA 149 (540)
Q Consensus 70 ~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (540)
.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++++++.|++.+...+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~ 324 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT------AWVALAGAALTGAGCSLIFPALG 324 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHhHHHHHH
Confidence 456677788888999999999999999999999999999888888887776 67788899999999998888888
Q ss_pred HHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH
Q 046667 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT 229 (540)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~ 229 (540)
+.+.|.+|+++|+++.++.+....+|..+++.+.+.+.+.. ||+..|.+.++..++.
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-----------------------g~~~~~~~~~~~~~~~ 381 (392)
T PRK12382 325 VEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-----------------------GYPSVFLAGAISAVLG 381 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------CchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986543 4999999988777765
Q ss_pred HHHHH
Q 046667 230 YYWRM 234 (540)
Q Consensus 230 ~~~~~ 234 (540)
.+..+
T Consensus 382 ~~~~~ 386 (392)
T PRK12382 382 IIVTI 386 (392)
T ss_pred HHHHH
Confidence 55543
No 141
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.38 E-value=1.7e-11 Score=119.63 Aligned_cols=145 Identities=12% Similarity=0.154 Sum_probs=120.2
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+..++..+.++ .+.+++.+++.|++.+.
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS------LWALLMLQLLNAIFIGI 304 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 788889999988888788888999999999999999988887776666555555555 57778889999999888
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
..+....++.|..|+ +|+++.++.+....+|..+++.+++.+.+.. ||+..|++.+
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-----------------------g~~~~~~~~~ 360 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-----------------------SYHAVYWFAI 360 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------------cchhHHHHHH
Confidence 888888999999875 5679999999999999999999999986543 4999999988
Q ss_pred HHHHHHHHHHHhCCC
Q 046667 224 LPAALTYYWRMKMPE 238 (540)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (540)
+..++..+...+++|
T Consensus 361 ~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 361 VMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHheecC
Confidence 877777666655543
No 142
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.37 E-value=7.9e-12 Score=124.47 Aligned_cols=153 Identities=10% Similarity=0.081 Sum_probs=121.1
Q ss_pred HHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh--cchhHHHHH--HHHHHHHHHHHhh
Q 046667 41 CISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK--LGRKKVYGM--TLMLMVICSIASG 116 (540)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr--~Grr~~~~~--~~~~~~i~~~~~~ 116 (540)
.....+|.+.+++ +.+..+.+++.++..++..+++++.|+++|| +++|+...+ +.++.+++.+++.
T Consensus 259 ~~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 259 APIIFLVPYAKDK----------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred chHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455555666 8999999999999999999999999999997 344443333 3444445555666
Q ss_pred ccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 046667 117 LSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKA 196 (540)
Q Consensus 117 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 196 (540)
+.++ ++.+++.+++.|++.+...+...+++.|.+|++++++..++++....+|..+||.+++.+.+..+
T Consensus 329 ~~~~------~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g----- 397 (455)
T TIGR00892 329 LAGD------YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK----- 397 (455)
T ss_pred Hhch------HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC-----
Confidence 6666 68888999999999999999999999999999999999999999999999999999998864332
Q ss_pred CCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHH
Q 046667 197 PAYEDDPIASTAPQADYLWRIIVMVGALPAALTYY 231 (540)
Q Consensus 197 ~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 231 (540)
+|++.|++.++..++..+
T Consensus 398 -----------------~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 398 -----------------NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred -----------------CcchHHHHhhHHHHHHHH
Confidence 399999987776655444
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.37 E-value=6.7e-12 Score=123.40 Aligned_cols=162 Identities=15% Similarity=0.102 Sum_probs=119.0
Q ss_pred HHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 046667 313 YSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAI 392 (540)
Q Consensus 313 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 392 (540)
+......|.+.++.|+++.+.+ .......++..++.++.|+++||+|||+.+..+.++.+++..+..+
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~------------~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 78 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYG------------YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF 78 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHH------------HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH
Confidence 3344455666666777655532 2566667778888999999999999999999888887777776665
Q ss_pred cccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccC
Q 046667 393 PYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKT 472 (540)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~ 472 (540)
.. ......+..+..+++.....+....++.|.+|+++|++++++.+....+|..+++.+.+.+.+
T Consensus 79 ~~--------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------- 143 (399)
T TIGR00893 79 AG--------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI------- 143 (399)
T ss_pred Hc--------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------
Confidence 44 133333343444444444566777889999999999999999999999999999999998873
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 473 DAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
..+|+..|++.+++.++..+..+ ..++++
T Consensus 144 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 144 ------HFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 56789999888887776666555 445443
No 144
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=1.5e-11 Score=121.23 Aligned_cols=180 Identities=16% Similarity=0.164 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~ 376 (540)
.+....+.++......+......+.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~ 80 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAAS------------LISAALISRWFGALMFGLWGDRYGRRLPM 80 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344455556666666666677777777777777665332 55566677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHH
Q 046667 377 MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVG 456 (540)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 456 (540)
..+.++.+++.+...+.. + ...+....+..+.+.....+...+++.|.+|+++|+++.++.+....+|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~-------~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 152 (405)
T TIGR00891 81 VTSIVLFSAGTLACGFAP-------G-YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVA 152 (405)
T ss_pred HHHHHHHHHHHHHHHHhc-------c-HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 998888777777665543 1 22333333444444444556677788999999999999999999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCC
Q 046667 457 AFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESK 507 (540)
Q Consensus 457 ~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (540)
+.+.+.+.+..+ .+|+..|++.++..++..+.....||++
T Consensus 153 ~~l~~~l~~~~~-----------~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 153 AQVYSLVVPVWG-----------DGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHhcC-----------ccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999998875221 2488888776655555544444566643
No 145
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=2.7e-11 Score=119.82 Aligned_cols=148 Identities=11% Similarity=0.011 Sum_probs=123.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++ .+.+.++.++.|++.+.
T Consensus 255 g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 255 QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM------WILAVLCLALFGYLSAI 328 (417)
T ss_pred CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch------HHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999988888888888888888888877776 57778888999998887
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGA 223 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~ 223 (540)
..+...+++.|..|++.|+++.++......+|..+|+.+.+.+.+..+ ++..+++.+
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-----------------------~~~~~~~~~ 385 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-----------------------PVASASASG 385 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-----------------------hhhHHHHHH
Confidence 778888999999999999999999999999999999999999976544 677777655
Q ss_pred HHH-HHHHHHHHhCCCCh
Q 046667 224 LPA-ALTYYWRMKMPETA 240 (540)
Q Consensus 224 ~~~-~~~~~~~~~~~esp 240 (540)
... ++..+....++|.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 386 FGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHHHHhccccc
Confidence 444 44455555666644
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=4.8e-11 Score=116.70 Aligned_cols=164 Identities=14% Similarity=0.080 Sum_probs=125.4
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
.......|.+.+++ +.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+
T Consensus 222 ~~~~~~lp~~l~~~----------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 291 (393)
T PRK09705 222 ASLIAWLPAFYIEI----------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP 291 (393)
T ss_pred HHHHHHHHHHHHHc----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc
Confidence 33444555555566 88999999999999999999999999999999999999888888777766655433
Q ss_pred CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 046667 120 GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPA 198 (540)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~ 198 (540)
.. ...+. -++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..++
T Consensus 292 ~~-----~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~------ 358 (393)
T PRK09705 292 LQ-----LPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN------ 358 (393)
T ss_pred ch-----HHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence 31 12222 245688888888888877777775 57899999999999999999999999999876653
Q ss_pred CCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCChhh
Q 046667 199 YEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETARY 242 (540)
Q Consensus 199 ~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp~~ 242 (540)
|...|++.++.+++..+. ..+.||++..
T Consensus 359 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 359 ----------------YLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 788888876666655444 4567776543
No 147
>PRK10054 putative transporter; Provisional
Probab=99.34 E-value=2.3e-11 Score=118.93 Aligned_cols=174 Identities=14% Similarity=0.021 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
+......++.....+....+.+.+++ +.|+++.+.+. ......+..+++.++.|+++||+|||+.+.
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~ 77 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGY------------AMTIALTIGVVFSLGFGILADKFDKKRYML 77 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Confidence 34444555555666666666776664 46776655322 444555666778889999999999999998
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+..+..++.+.+.+.. +.+..+.... ..+.......+...++..|..|++.|+++.|+.+...++|..++|
T Consensus 78 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp 149 (395)
T PRK10054 78 LAITAFASGFIAIPLVN-------NVTLVVLFFA-LINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGP 149 (395)
T ss_pred HHHHHHHHHHHHHHHHh-------HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777766665543 1222222222 222222233455667788999999999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 458 FGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 458 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
.+.+.+.+ .+|+..|++.+++.+++.+... ++++.
T Consensus 150 ~l~~~l~~--------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 150 PLGTLLVM--------------QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHH--------------hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998872 4788889888877777765554 45544
No 148
>PRK09952 shikimate transporter; Provisional
Probab=99.34 E-value=9e-11 Score=116.44 Aligned_cols=151 Identities=12% Similarity=0.105 Sum_probs=110.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhc---cCCCCcchhhHHHHHHHHHHhhc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGL---SFGNSPKGVMATLCFFRFWLGFG 140 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~ 140 (540)
+.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.... ..+. .+.+++..++.|++
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~ 356 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI-----FWIVFFSIMLANIA 356 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHH
Confidence 677766666666666777888999999999999999988887766655443322 2221 34445566777888
Q ss_pred cccchhhHHHHHhhhcCcccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHH
Q 046667 141 IGGDYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIV 219 (540)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f 219 (540)
.+...+...+++.|.+|++.|+...++.. .+..+|..++|.+.+++.+..+ .+|+..+
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---------------------~~~~~~~ 415 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---------------------GSWHSVA 415 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------CCchHHH
Confidence 88888889999999999999988888854 4455888999999998865332 2388888
Q ss_pred HhhhHHHHHHHHHHHhCCCCh
Q 046667 220 MVGALPAALTYYWRMKMPETA 240 (540)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~esp 240 (540)
...++.+++..+..+.++|+.
T Consensus 416 ~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 416 IYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHccccc
Confidence 887777777666666667643
No 149
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=9.5e-12 Score=121.48 Aligned_cols=163 Identities=11% Similarity=-0.017 Sum_probs=117.5
Q ss_pred HHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 046667 311 AFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFAL 390 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~ 390 (540)
.........|.+.++.|+++.+.+ .......++..++.++.|+++||+|||+.+..+..+.+++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g------------~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLG------------LLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHH------------HHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 344445556666666777665532 25566677778888999999999999999999988888887777
Q ss_pred HhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH-HHHHHhhcccc
Q 046667 391 AIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF-GFLYLAQSKDK 469 (540)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~-i~~~~~~~~~~ 469 (540)
.+.. ......+..+..+++.....+...+++.|.+|+++|+++.++.+....+|..+++. +.+.+.
T Consensus 78 ~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----- 144 (379)
T TIGR00881 78 GFST--------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA----- 144 (379)
T ss_pred HHhh--------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH-----
Confidence 6654 12333334444444445556777789999999999999999999999999999994 555554
Q ss_pred ccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 470 TKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 470 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
+..+|+..|++.+++.++..+..+ +.+++
T Consensus 145 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 145 --------ELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred --------hcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 356888888888877766655555 45544
No 150
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=8e-11 Score=115.29 Aligned_cols=139 Identities=18% Similarity=0.175 Sum_probs=111.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHH-HhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSI-ASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+.+..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. +....++ .+.++++.++.|++.+
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANS------EWHLSVLSIFWGIAIM 309 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhch------HHHHHHHHHHHHHHHh
Confidence 788889999999999999999999999999999887544 4444444433 3344454 6778888999999888
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
...+...+.+.|..| ++|++++++......+|..+|+++++.+.+ ..|++..|++.
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~-----------------------~~g~~~~~~~~ 365 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL-----------------------HLGLSSIGYVG 365 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------ccChhHHHHHH
Confidence 777888888888876 688999999999999999999999999964 45599999998
Q ss_pred hHHHHHHHHHH
Q 046667 223 ALPAALTYYWR 233 (540)
Q Consensus 223 ~~~~~~~~~~~ 233 (540)
++..++..+..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 87777655543
No 151
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.34 E-value=7.1e-11 Score=115.17 Aligned_cols=132 Identities=8% Similarity=-0.065 Sum_probs=117.6
Q ss_pred HHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCC
Q 046667 42 ISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGN 121 (540)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 121 (540)
.....|...++. +.+..+.|.+.+...++..++.++.+++.||+|+|+.+.++.+..++..++.+++++
T Consensus 224 ~~~~~~~~l~~~----------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~- 292 (382)
T TIGR00902 224 YYGFSAIYWQAA----------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEA- 292 (382)
T ss_pred HHHHHHHHHHHC----------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 334445554567 899999999999999999999999999999999999999999999999999999888
Q ss_pred CcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q 046667 122 SPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIFALIVSSAF 190 (540)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~ 190 (540)
++.+++.+++.|++.+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+..
T Consensus 293 -----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 293 -----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999999999998 9999999999976 577899999999999997543
No 152
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.34 E-value=1.5e-11 Score=124.76 Aligned_cols=132 Identities=19% Similarity=0.194 Sum_probs=103.7
Q ss_pred HHHHHhhh-hhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCC
Q 046667 43 SLVTKLLG-RIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGN 121 (540)
Q Consensus 43 ~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 121 (540)
...+|.+. +++ +.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..++.....+.
T Consensus 295 ~~~lp~~l~~~~----------g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (496)
T PRK03893 295 QALLPTYLKTDL----------GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGA 364 (496)
T ss_pred HHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcccc
Confidence 34556555 466 8999999999999999999999999999999999999888877777665544443321
Q ss_pred CcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 122 SPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
..+.+.+..++.+....+..+..++++.|.+|+++|++++++......+|..+||.+++.+.+
T Consensus 365 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 365 ----NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred ----HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 134444555555544444567778899999999999999999999999999999999999853
No 153
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.34 E-value=2.4e-10 Score=107.49 Aligned_cols=344 Identities=11% Similarity=0.035 Sum_probs=198.5
Q ss_pred CCChhhhh-HHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSA-AVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++ ...+-+..++-|++.+
T Consensus 36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s------v~~mq~~q~~yg~~~a 109 (412)
T PF01770_consen 36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS------VLAMQLMQFFYGLATA 109 (412)
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc------HHHHHHHHHHHHHHHH
Confidence 78877764 5556666677888999999999999999999999999999999999988 8999999999999865
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
. ..+.++++-...|+++-.++.+...+..-+|..++.++|..+.... ....+..+++.
T Consensus 110 ~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~---------------------~~sy~~L~~is 167 (412)
T PF01770_consen 110 A-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG---------------------GVSYFQLNYIS 167 (412)
T ss_pred H-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------CCCHHHHHHHH
Confidence 4 7888899999999999999999999999999999999999887533 23477787777
Q ss_pred hHHHHHHHHHHHhCCCChhhHHHhhccHHHHH-HHHHHHHhhhchhhHhhhhhhh-cccCCcc----chhhHHHhhhhhH
Q 046667 223 ALPAALTYYWRMKMPETARYTALVAKNAKQAA-SDMSKVLQVELEAEEQKIQELD-RDKGNGY----GLFSKEFLRRHGL 296 (540)
Q Consensus 223 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~ 296 (540)
.....+++++.+++|..++....+++..++.. ++.+.....+.+++..+.++.. ..+.... .+.++-..--..+
T Consensus 168 l~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~ 247 (412)
T PF01770_consen 168 LASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNP 247 (412)
T ss_pred HHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCc
Confidence 76666677777788876653212222111110 0000000000000000000000 0000000 1111111101112
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~ 376 (540)
.++...+-|.+...+++....|...+.++..-....... .+..-....+.+.++.+..|++..++.+...+
T Consensus 248 ~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vY---------NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l 318 (412)
T PF01770_consen 248 RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVY---------NGAVEAASTLLGAIAALLAGYVKVNWDRWGEL 318 (412)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCccc---------chHHHHHHHHHHHHHHHHHhHhhcchHHHHHH
Confidence 334444556666677777777777777775111111111 11133333334445566777775555554443
Q ss_pred HHHHH--HHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHh
Q 046667 377 MMGFF--FMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLG 452 (540)
Q Consensus 377 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 452 (540)
.++.. +.+.+++++.... +.+.....+.++....... .++...-++.....+.-|...|+.++...+-
T Consensus 319 ~l~~~S~l~a~~L~lm~~t~-------~Iwv~Y~~yIif~~~y~fl-iTiA~~qIA~~l~~e~yaLVFGiNtf~Al~L 388 (412)
T PF01770_consen 319 ALGVFSLLQAGLLFLMSFTG-------NIWVCYAGYIIFRSLYMFL-ITIASFQIAKNLSEERYALVFGINTFVALVL 388 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccccceeeeeeeHHHHHHHH
Confidence 33332 2333333333332 2333334444443333332 2333333444455666677777776654443
No 154
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.34 E-value=2.4e-11 Score=118.96 Aligned_cols=166 Identities=15% Similarity=0.175 Sum_probs=120.0
Q ss_pred HHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 046667 309 DIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMF 388 (540)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~ 388 (540)
...........|.+.++.|.++.+.+ .......++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g------------~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 85 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQ------------MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL 85 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH
Confidence 34444444556777777776655422 255566677788889999999999999999998888877777
Q ss_pred HHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 389 ALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
...... + .....+..+..+++.....+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+
T Consensus 86 ~~~~~~-------~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 154 (385)
T TIGR00710 86 GLALSN-------N-IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV--- 154 (385)
T ss_pred HHHHHc-------c-HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 665543 1 22333333344444444456667888999999999999999999999999999999998874
Q ss_pred cccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 469 KTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
..+|+..+++.+++.++..+..+ ..||++
T Consensus 155 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 155 ----------WLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred ----------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 56899999888877777666555 455543
No 155
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.34 E-value=9.9e-10 Score=105.23 Aligned_cols=340 Identities=13% Similarity=0.116 Sum_probs=190.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHh
Q 046667 74 NGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMS 153 (540)
Q Consensus 74 ~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (540)
.++-+..+.+++++.+.+.|+.|.|+.+.++......-.+..-+-+. +.+++.-.+.|+|.+..+...-.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~-------y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS-------YYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch-------HHHHHHHHHhhhhHHheecccceehh
Confidence 77888889999999999999999999999999999988887777665 88999999999999999999999999
Q ss_pred hhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCC-CCCcchHHHHHhhhHHHHHHHHH
Q 046667 154 EYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAP-QADYLWRIIVMVGALPAALTYYW 232 (540)
Q Consensus 154 e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~gwr~~f~~~~~~~~~~~~~ 232 (540)
|..+++.+.+..++..+....+.++|..+...+.......... ...+.....+. ..+..-+..+.+...+..+.++.
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~ 206 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAII--TDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIIN 206 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEeccccccc--ccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999888877665553322210000 00000000000 00001111111111112222222
Q ss_pred HHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHH--HHH
Q 046667 233 RMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFL--LDI 310 (540)
Q Consensus 233 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 310 (540)
..+.|.+.... ..+..++...+.+. ...+.++++ .++......+. ...
T Consensus 207 ~~~~p~~~~~~-~~~~~~~~~~~~l~----------------------~~~~l~~~~-------~ml~L~~~f~~tG~~~ 256 (461)
T KOG3098|consen 207 FDFLPSKDVVN-CKSSSETSFSELLK----------------------LTFKLLKTP-------KMLLLFPFFFYTGLET 256 (461)
T ss_pred eeecCccchhh-hhhhccccHHHHHH----------------------HHHHHhcCH-------hHHHHHHHHHHHHHHH
Confidence 22233211100 00000000000000 000111111 11111111111 111
Q ss_pred HHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh---ccchhHHHHHHHHHHHHH
Q 046667 311 AFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK---IGRFAIQMMGFFFMTVFM 387 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~---~g~r~~~~~~~~~~~~~~ 387 (540)
.++. ..+-..+ ..+.. ...+......+..+..+++.+.+....+.+.+| +||+..+.++..+..+..
T Consensus 257 Sf~~-~iypt~i----~ft~~-----~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~ 326 (461)
T KOG3098|consen 257 SFWI-SIYPTCI----SFTRK-----LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGF 326 (461)
T ss_pred HHHH-hccchhh----hhhhh-----ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHH
Confidence 1111 1111111 11100 011111234456777778888888888888766 577887777777666655
Q ss_pred HHHHhcccccc---c-C------CchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 388 FALAIPYDHWT---H-K------SNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 388 ~~~~~~~~~~~---~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
++.......-. . . ........+..+..++.-.......+.++...+ ++.|..+.++.-....++..++-
T Consensus 327 ~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 327 LLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHh
Confidence 55444332111 0 0 112334555555666666777777888888888 45588889888888888777766
Q ss_pred HHHHHH
Q 046667 458 FGFLYL 463 (540)
Q Consensus 458 ~i~~~~ 463 (540)
+..+..
T Consensus 406 f~~~~~ 411 (461)
T KOG3098|consen 406 FFSPYL 411 (461)
T ss_pred hhhhhh
Confidence 665544
No 156
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.33 E-value=1.9e-11 Score=115.78 Aligned_cols=151 Identities=16% Similarity=0.198 Sum_probs=111.1
Q ss_pred hHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccc
Q 046667 318 FQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHW 397 (540)
Q Consensus 318 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 397 (540)
++--.+++.+-.+...|. .......+.++..++.+++.+|+|+-+++..++.+..+=++.+....
T Consensus 393 FLfWHled~~~~~~LfGv------------~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--- 457 (618)
T KOG3762|consen 393 FLFWHLEDLGGIKTLFGV------------VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--- 457 (618)
T ss_pred HHHHHHhhcCCcceeeee------------hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc---
Confidence 333345555655555443 66777788899999999999999999999999888887777776655
Q ss_pred ccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHH-HHhHHHHHHHHHHHhhccccccCCCCC
Q 046667 398 THKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASG-KLGAIVGAFGFLYLAQSKDKTKTDAGY 476 (540)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~i~~~i~~~~~~~~~~~~~~~~~ 476 (540)
++|.+..+-++-+......+....+|+....||+.+.++.++..... .+|-.+|.++.|.+.
T Consensus 458 -----n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v------------ 520 (618)
T KOG3762|consen 458 -----NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV------------ 520 (618)
T ss_pred -----CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh------------
Confidence 23344444444443333344556678899999999999999996654 679999999999998
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 477 PPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 477 ~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
..++-+..|.++++.+++.+++..
T Consensus 521 -~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 521 -ERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred -eeehhHHHHHHHHHHHHHHHHHHH
Confidence 467788889888888877766655
No 157
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.32 E-value=1.1e-10 Score=113.79 Aligned_cols=148 Identities=18% Similarity=0.148 Sum_probs=119.5
Q ss_pred HHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCc
Q 046667 44 LVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSP 123 (540)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 123 (540)
..+|...++. +.+.++.+++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... ..
T Consensus 221 ~~lp~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~--- 285 (381)
T PRK03633 221 GLMPLYLNHQ----------GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ--- 285 (381)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---
Confidence 3456555555 78888999999999999999999999999999999999888888877665443 22
Q ss_pred chhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 046667 124 KGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDP 203 (540)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 203 (540)
.......++.|++.....|...+++.|..|+++++...+......++|..+||.+++++.+..
T Consensus 286 ----~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~------------- 348 (381)
T PRK03633 286 ----AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY------------- 348 (381)
T ss_pred ----HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 344456778888777788999999999999888888888888889999999999999996544
Q ss_pred ccccCCCCCcchHHHHHhhhHHHHHHHHHH
Q 046667 204 IASTAPQADYLWRIIVMVGALPAALTYYWR 233 (540)
Q Consensus 204 ~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 233 (540)
+|++.|.+.+...++..+..
T Consensus 349 ----------g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 349 ----------SDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred ----------CccHHHHHHHHHHHHHHHHH
Confidence 38999988777666554444
No 158
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.32 E-value=4.9e-11 Score=117.12 Aligned_cols=174 Identities=11% Similarity=0.070 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhc-cchh
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKI-GRFA 374 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~-g~r~ 374 (540)
.++............+|+...+++.++.+ .|+++.+ +............++.+++|+++||+ |||+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr 77 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------------AYELFSAYCSLVYVTPILGGFLADKVLGNRM 77 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 34444555555667888888888888765 4554433 22245555566677888999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh--hhhhhhHHHHHHHHHh
Q 046667 375 IQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAASGKLG 452 (540)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 452 (540)
.+.++.++..++.+++..... ........... ...+.....+...+++.|.+|++ .|.++.++.....++|
T Consensus 78 ~iliG~il~~lg~lll~~~~~-----~~~~~~l~l~l--i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 78 AVMLGALLMAIGHVVLGASEI-----HPSFLYLSLAI--IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-----chhHHHHHHHH--HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 999999888888766543210 01111111111 11222223344567889999875 6999999999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 453 AIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 453 ~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
+.++|.+.+++. +..||+..|.+.++.++++.+..+.
T Consensus 151 ~~iap~l~g~L~-------------~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 151 SIIAPIACGYAQ-------------EEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHHHH-------------hhhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 4668999998877766665555443
No 159
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3.1e-11 Score=112.91 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhH
Q 046667 296 LHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAI 375 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~ 375 (540)
..++......|......+...-.+|.+-++++.+....++ ....+.++..++.++...+.||+.||++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~------------lis~yAl~~ai~ap~l~~lt~r~~Rr~l 80 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQ------------LITAYALGVALGAPLLALLTGRLERRRL 80 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 3456667777777788888888889998888877666433 7777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHH
Q 046667 376 QMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIV 455 (540)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 455 (540)
++....+..++.++..+... +....+.=+..++......++..++..++.|+++|++++++..+...++.++
T Consensus 81 Ll~~l~lFi~~n~l~alAp~--------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~ 152 (394)
T COG2814 81 LLGLLALFIVSNLLSALAPS--------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL 152 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH
Confidence 99999999999988888763 4445555555556666667788889999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcc
Q 046667 456 GAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVP 504 (540)
Q Consensus 456 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 504 (540)
|..+..++- +.+|||.+|+..+++.+++.+..+ .+|
T Consensus 153 GvPLGt~ig-------------~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 153 GVPLGTFLG-------------QLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hccHHHHHH-------------HHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998 578999999999999999988887 677
No 160
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.32 E-value=3.1e-11 Score=122.07 Aligned_cols=175 Identities=13% Similarity=0.093 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHH
Q 046667 300 GTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMG 379 (540)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~ 379 (540)
......+.............|.+.++.|.++.+.+. ......++..++.++.|++.||+|||+.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQW------------VITSYMLANAISIPLTGWLAKRFGTRRLFLIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhH------------HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHH
Confidence 334444444455555666778888887776655332 55666777788889999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 046667 380 FFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFG 459 (540)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 459 (540)
..+..++.++..... ......+..+..+++.....+...+++.|.+|++.|+++.++......+|..++|.+
T Consensus 74 ~~~~~~~~~~~~~~~--------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 74 TFAFTLGSLLCGVAP--------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHHhCcC--------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 888888877766543 233333444444455455566777889999999999999999999999999999999
Q ss_pred HHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 460 FLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
.+++. +.++|+..|++.+.+.++..++.+ ..|+++
T Consensus 146 ~~~l~-------------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 146 GGWII-------------ENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred HhHhc-------------cCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 99987 467899999888777776666555 455543
No 161
>PRK10504 putative transporter; Provisional
Probab=99.31 E-value=5.7e-11 Score=119.56 Aligned_cols=175 Identities=13% Similarity=0.066 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
++......++.....+....+.|.+.++.|+++.+.+ . ......++..++.++.|+++||+|||+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~-----------~-~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 79 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMH-----------M-VIVSYVLTVAVMLPASGWLADRVGVRNIFF 79 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 4555556666666677777788999888887665422 1 445556666778889999999999999998
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+..+.+++.+...... + ...+.+..+..+++.....+...+++.|.+|++.|+++.|+.+....+|..++|
T Consensus 80 ~~~~~~~~~~~~~~~~~-------~-~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 151 (471)
T PRK10504 80 TAIVLFTLGSLFCALSG-------T-LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGP 151 (471)
T ss_pred HHHHHHHHHHHHHHHhC-------C-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 88777777666554432 1 222333334444444444566777888999999999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hccc
Q 046667 458 FGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 458 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (540)
.+.+.+.+ ..+|+..|.+...+.+++.+... ..++
T Consensus 152 ~~~g~l~~-------------~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 152 ALGGLLVE-------------YASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHh-------------hccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999984 56899999888777776666655 3343
No 162
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.31 E-value=7.9e-11 Score=118.78 Aligned_cols=177 Identities=16% Similarity=0.048 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHH
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQ 376 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~ 376 (540)
.+....+..+.............|.+.++.+.++.+.+. ......++...+.+..|+++||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~------------~~~~~~l~~~~~~~~~G~l~D~~Grk~~l 74 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLW------------IIDIYSLVMAGMVLPMGALGDRIGFKRLL 74 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 445555566666666666777788888887766554222 33445555566777899999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccC-chhhhhhhhHHHHHHHHHhHHH
Q 046667 377 MMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIF-PARLRSTCHGISAASGKLGAIV 455 (540)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~i 455 (540)
..+..+..++.++..... + ...+++.-++.+++.....+.....+.+.+ |+++|+++.|+......+|..+
T Consensus 75 ~~~~~~~~~~~~~~~~a~-------~-~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 75 MLGGTLFGLASLAAAFSP-------T-ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHHcC-------C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888887777654 2 223333333333333333444444454554 7889999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 456 GAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 456 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
+|.+.+.+. +..+|++.|++...+.++..++.. ++|+.
T Consensus 147 gp~lgg~l~-------------~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 147 GPLVGGILL-------------EHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHhh-------------ccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999998 467899999988777777666555 55554
No 163
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.31 E-value=3.9e-11 Score=119.77 Aligned_cols=175 Identities=13% Similarity=0.021 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH---hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh-ccc
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSA---VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK-IGR 372 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~ 372 (540)
.++.+....++....+|+...+++.++.+ .|+++.+ +........++..++.+++|+++|| +||
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------------ag~~~~~~~~~~~~~~~~~G~laDr~~G~ 78 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------------AFIIFGAYSALVYLLTSVGWWFGDRVWGT 78 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------------HHHHHHHHHHHHHHHHhhHHHHHHhhcch
Confidence 34555566666678888888889988765 4555444 3335666667778899999999999 899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh---hhhhhhHHHHHHH
Q 046667 373 FAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAASG 449 (540)
Q Consensus 373 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 449 (540)
|+.+..+.++.+++.+++.+.. +.+ ...+...+.+.+.....+...+++.|.+|++ .|+++.++.+...
T Consensus 79 ~~~l~~~~~~~~~g~~~~~~~~-------~~~-~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ 150 (475)
T TIGR00924 79 KKTMVLGGIVLMLGHFMLAMSI-------YPD-LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSI 150 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------cHh-HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHH
Confidence 9999999999888887776543 112 2222223334444444566667888888765 4888999999999
Q ss_pred HHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 450 KLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 450 ~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
++|..++|.+.+++.+ ..||+..|.+.++.++++.+...+.+
T Consensus 151 niG~~ig~~l~g~l~~-------------~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 151 NIGSFISPLLAGVIAE-------------NYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHHHHHHH-------------hcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999983 56899999888776666554444433
No 164
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.30 E-value=3.1e-11 Score=116.56 Aligned_cols=163 Identities=18% Similarity=0.229 Sum_probs=119.4
Q ss_pred HHHHHHhhhHH-HHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 046667 310 IAFYSQNLFQK-DIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMF 388 (540)
Q Consensus 310 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~ 388 (540)
..........+ .+.++.|+++.+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 10 FGFSIISPALPLYLAEELGLSPSQIGL------------LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHH-HHHCCSTTTSHCHHH------------HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHH
Confidence 34444445555 555566777666332 55556677788899999999999999999999888888844
Q ss_pred HHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 389 ALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
+..+.. +.+ ...+..+..+.+.....+....++.|.+|+++|++++++.+....+|..++|.+.+.+.
T Consensus 78 ~~~~~~-------~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---- 145 (352)
T PF07690_consen 78 LLAFAS-------NFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI---- 145 (352)
T ss_dssp HHHHHC-------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred Hhhhhh-------hHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh----
Confidence 444322 233 44444455555555556778889999999999999999999999999999999999997
Q ss_pred cccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hccc
Q 046667 469 KTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (540)
+..+|+..|++.+++.++..++.. +.++
T Consensus 146 ---------~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 146 ---------SYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp ---------CHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred ---------hccccccccccccchhhhhhhhHhhhhhh
Confidence 467899999999999888877543 4443
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.30 E-value=9.4e-11 Score=116.42 Aligned_cols=161 Identities=15% Similarity=0.100 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
+....+.++......+......+.+.++.|+++.+.+ .......++..++.++.|+++||+|||+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~------------~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGA------------FLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3444445555555555556666777677777655422 2555666777888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+.+..+++.++..+... ...+.+.-+..+++.....+....++.|.+|++.|+++.++......+|.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 159 (426)
T PRK12307 88 WSIVAYSVGTGLSGLASG--------VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA 159 (426)
T ss_pred HHHHHHHHHHHHHHHHhH--------HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence 999988888877666541 223333333444444444566677889999999999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCCCcchhhHHHHHHH
Q 046667 458 FGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGV 491 (540)
Q Consensus 458 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 491 (540)
.+.+.+. +..+|+..|++...
T Consensus 160 ~l~~~l~-------------~~~~w~~~f~i~~~ 180 (426)
T PRK12307 160 YFMPSFA-------------EAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHc-------------ccCCHHHHHHHHHH
Confidence 9888886 45689998876443
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=7.8e-11 Score=118.00 Aligned_cols=180 Identities=12% Similarity=0.096 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHH
Q 046667 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGF 380 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~ 380 (540)
....++......+....+.|.+.++.|+++.+.+ . ......++..++.++.|+++||+|||+.+..+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g-----------~-~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 41 SWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIG-----------N-AGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3334444444455556667777777777655422 2 345566677888899999999999999988888
Q ss_pred HHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 381 FFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
++.+++.++..+.. +.. .+.+..++.+++.....+ ...++.|.+|++.|++++|+.+...++|..+++.+.
T Consensus 109 ~~~~~~~~~~~~~~-------s~~-~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 109 MLTAPAVFCMSLVS-------SAT-GFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred HHHHHHHHHHHHhc-------CHH-HHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766665543 122 222222233333332222 334678999999999999999988888888887777
Q ss_pred HHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhccc
Q 046667 461 LYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPE 505 (540)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 505 (540)
+.+....... +..+..||+..|++.+++.++..+..+++++
T Consensus 180 ~~i~~~~~~~----~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 180 PLVFPLIKDA----GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHhc----CCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6654321100 0002358999999998888777666665443
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=7e-11 Score=117.42 Aligned_cols=143 Identities=8% Similarity=-0.002 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++..++.++.|+++||+|||+.+..+.++.+++.+.+...... ........+..+..++......+....
T Consensus 66 ~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 66 ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAIMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHHHHHHHHHHHHHhhcchHHHHH
Confidence 5556667778889999999999999999888887777776665443210 112222222223333333333344556
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
.+.|.+|++.|++++|+.+....+++.+++.+.+...+ ...+|+..|++.++++++..+..+ +++|+
T Consensus 142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~------------~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA------------WFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH------------HhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 77899999999999999999999999999888776553 235899999998888777665555 55554
No 168
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.29 E-value=2.7e-10 Score=111.97 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=118.8
Q ss_pred HHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH-HHHHHHHHHHHH
Q 046667 36 AYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG-MTLMLMVICSIA 114 (540)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~-~~~~~~~i~~~~ 114 (540)
...........|.+.+++ +.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.
T Consensus 235 ~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~ 304 (402)
T TIGR00897 235 TIGLFGFAVFLPMFVAEL----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA 304 (402)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 333344455667666777 889999999999999999999999999999999988764 333444444333
Q ss_pred hhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 046667 115 SGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAF 194 (540)
Q Consensus 115 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 194 (540)
..+.+... .+..+.+++..++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+.+.
T Consensus 305 l~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~----- 376 (402)
T TIGR00897 305 LYYIPQHF-GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF----- 376 (402)
T ss_pred HHHHHHcc-CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 33211000 00156677788889988776544 4556677655 6899999999999999999999999998654
Q ss_pred CCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhC
Q 046667 195 KAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKM 236 (540)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~ 236 (540)
.||+..+++.++..++..+...|+
T Consensus 377 ------------------~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 377 ------------------FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ------------------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 348999998877777666655544
No 169
>PRK03699 putative transporter; Provisional
Probab=99.29 E-value=1.6e-10 Score=113.26 Aligned_cols=167 Identities=8% Similarity=0.052 Sum_probs=127.7
Q ss_pred HHHHHHHhHhHHHHHHHhhh-hhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTKLLG-RIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMV 109 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~ 109 (540)
..++.......+....|.+. +++ +.+..+.+++.+.+.++..++.++.|+++||++||+.+.....+..
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 33333333334444555544 566 8999999999999999999999999999999999999988887777
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 110 ICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSA 189 (540)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 189 (540)
+...+....++ .+.+.+..++.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+.
T Consensus 283 ~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 283 VLMYLFVNTDD------PSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHcCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 77666666666 4566677788999888888888888888776 4567888888888999999999999999654
Q ss_pred hhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC
Q 046667 190 FNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP 237 (540)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 237 (540)
. ||+..+++.++..++..+....++
T Consensus 356 ~-----------------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 356 F-----------------------GLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred h-----------------------CchhhhhhhHHHHHHHHHHHHHHH
Confidence 3 489998887766666544444443
No 170
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.28 E-value=6.7e-11 Score=116.01 Aligned_cols=167 Identities=8% Similarity=0.058 Sum_probs=117.3
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 046667 308 LDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFM 387 (540)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~ 387 (540)
............|.+.++.+.++.+. ........++..++.++.|+++||+|||+.+..+..+..++.
T Consensus 15 ~~~~~~~~~~~lp~~~~~~~~s~~~~------------~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 15 YPAGIDMYLVGLPRIAADLNASEAQL------------HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHhhhHHHHHHHhCCCHHHH------------HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 33444444466777777766655442 224555566777888899999999999999998888877777
Q ss_pred HHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcc
Q 046667 388 FALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSK 467 (540)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~ 467 (540)
....... + ........+..+.......+..++++.|.+|++.|+++.++.+....++..++|.+.+.+.
T Consensus 83 ~~~~~~~-------~-~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~--- 151 (392)
T PRK10473 83 LLCSLAE-------T-SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM--- 151 (392)
T ss_pred HHHHHhC-------c-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 7665543 1 2222222233333333334556778899999999999999999999999999999988876
Q ss_pred ccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 468 DKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
+..+|+..+++.+++.++..++.+ ..+|++
T Consensus 152 ----------~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 152 ----------LKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred ----------hCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 356899999888887777766655 566654
No 171
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.28 E-value=4.5e-11 Score=117.42 Aligned_cols=144 Identities=13% Similarity=0.029 Sum_probs=109.1
Q ss_pred HHHHHHhHhHHHHHHHhhh-hhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLG-RIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVI 110 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i 110 (540)
.+.............|.+. +++ +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTL----------GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3333444444445555554 556 78888999999999999999999999999999999987765544443
Q ss_pred HH--HHhhcc--CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHH-HHHHHHHHHHHHHHHHH
Q 046667 111 CS--IASGLS--FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAV-FAMQGFGILAGGIFALI 185 (540)
Q Consensus 111 ~~--~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~ 185 (540)
.. ++..+. ++ .+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +.+..+|..++|.+++.
T Consensus 298 ~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 298 LAVPLLMALLDSGS------FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHhcCCc------hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 33 222222 23 567777889999988889999999999999999999999974 56667899999999999
Q ss_pred HHHHhh
Q 046667 186 VSSAFN 191 (540)
Q Consensus 186 l~~~~~ 191 (540)
+.+..+
T Consensus 372 l~~~~g 377 (394)
T TIGR00883 372 LVAMTG 377 (394)
T ss_pred HHHHcC
Confidence 976544
No 172
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=7.4e-11 Score=119.19 Aligned_cols=184 Identities=16% Similarity=0.118 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
.+....+..+.............|.+.+++ +.+..+.++......++..++.++.|+++||+|||+.+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 354 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENA----------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI 354 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHc----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 333333444443333344455667777777 7888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc---cCCCCc--chhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGL---SFGNSP--KGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 104 ~~~~~~i~~~~~~~---~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~ 178 (540)
+.++.+++.++.++ ...... ......+....++.+.......+....++.|.+|+++|+++.++.+....+|.++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i 434 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777662 111100 0012233333333333323345667778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH-HhCCCCh
Q 046667 179 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR-MKMPETA 240 (540)
Q Consensus 179 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~esp 240 (540)
++.+.+.+.+. .+|++.|++.++.+++..+.. ++.||++
T Consensus 435 ~~~~~~~~~~~-----------------------~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 435 VGFLFPTMLES-----------------------IGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHh-----------------------cCccceehhHHHHHHHHHHHHheecccCC
Confidence 99998888543 348999988777766655554 4566654
No 173
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.27 E-value=2.4e-10 Score=114.00 Aligned_cols=162 Identities=9% Similarity=0.000 Sum_probs=104.1
Q ss_pred HhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 315 QNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
.....|.+.++ ++++.+. ........++..++.++.|+++||+|||+.++.+.++.+++.+.+.+..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~------------g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~ 114 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDL------------GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVP 114 (452)
T ss_pred HHHhhHHHHHc-CCCHHHH------------HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhh
Confidence 34455655544 6655442 2255666777788899999999999999999999888887777666542
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHH-HHHHHHHHhhccccccCC
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIV-GAFGFLYLAQSKDKTKTD 473 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i-~~~i~~~~~~~~~~~~~~ 473 (540)
.. ......+.+..++.+++.....+.....+.|.+|++.|++++|+.+....+|+.+ +|.+...+..
T Consensus 115 ~~----~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-------- 182 (452)
T PRK11273 115 WA----TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-------- 182 (452)
T ss_pred cc----cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH--------
Confidence 10 1122222332233333333334444456788899999999999999998888654 5544333321
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 474 AGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
..+|+..|++.+++.++..++.+ ++||+
T Consensus 183 -----~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 183 -----FNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred -----hccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 23889999888877766555444 56654
No 174
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=1.1e-09 Score=109.84 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=114.3
Q ss_pred CCChhhhhHHHH-HHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHh---hccCCCCcchhhHHHHHHHHHHhh
Q 046667 64 SLPPNVSAAVNG-VAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIAS---GLSFGNSPKGVMATLCFFRFWLGF 139 (540)
Q Consensus 64 ~~s~~~~g~~~s-~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~ 139 (540)
+.+..+.+++.. ...++..++.++.|+++||+|||+.+.++.++.+++.++. +...+. .+.+.+.-++..+
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~-----~~~l~~~~~l~~~ 328 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKN-----LYSMGAAVFFENL 328 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHH
Confidence 899999999984 6678999999999999999999998877666555544332 232221 4445555666666
Q ss_pred ccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHH
Q 046667 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIV 219 (540)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f 219 (540)
+.|...+...++..+..+++.+++..++.+...++|..+++.+++.+.+. .||+..|
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----------------------~G~~~~f 385 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----------------------HGWPTFY 385 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hChHHHH
Confidence 55666677889999999999999999999999999999888888888653 3499999
Q ss_pred HhhhHHHHHHHHHHHhCCCC
Q 046667 220 MVGALPAALTYYWRMKMPET 239 (540)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~es 239 (540)
.+.++.+++.++...+++++
T Consensus 386 ~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 386 LFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99888888876666555554
No 175
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=6.4e-10 Score=109.63 Aligned_cols=161 Identities=15% Similarity=0.179 Sum_probs=135.6
Q ss_pred HHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh--HHHHHHHHHHHHHHHHhhc-
Q 046667 41 CISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK--KVYGMTLMLMVICSIASGL- 117 (540)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr--~~~~~~~~~~~i~~~~~~~- 117 (540)
.++.......+++ +++..+...+.-+..+...+|++++|++.||+|.| ++++.+++++.+..+...+
T Consensus 300 i~~~~~i~a~~~l----------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G 369 (477)
T PF11700_consen 300 IISFAGIYATEVL----------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFG 369 (477)
T ss_pred HHHHHHHHHHHhc----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555577 89999999999999999999999999999999999 8988888888655555444
Q ss_pred -------cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046667 118 -------SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAF 190 (540)
Q Consensus 118 -------~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 190 (540)
..+ -+.+.+.-++.|+..|+.++...++.+|..|+++.+..+|++....-....+||++.+.+.+..
T Consensus 370 ~~~~~~g~~~------~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 370 FWPSFFGLKS------PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred hhhcccCccc------HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333 5889999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCC
Q 046667 191 NAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPET 239 (540)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~es 239 (540)
++ -|+.++...++.++.+++.++++++
T Consensus 444 g~----------------------~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 444 GS----------------------QRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred CC----------------------chhHHHHHHHHHHHHHHHHhhccch
Confidence 64 6888888777777777766666543
No 176
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=1.5e-10 Score=113.02 Aligned_cols=176 Identities=14% Similarity=0.062 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
++......+......+......|.+.++.|++..+.+. ......++..++.++.|++.||+|||+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~ 72 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGH------------MISYYALGVVVGAPIIALFSSRYSLKHILL 72 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhH------------HHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 33444444555555555666777777777776655332 556667788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+..+.+++.++..+.. + ...+.+.-+..++......+....+..|.+|++.|++++++......++..++|
T Consensus 73 ~~~~~~~~~~~l~~~~~-------~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 144 (382)
T PRK10091 73 FLVALCVIGNAMFTLSS-------S-YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGI 144 (382)
T ss_pred HHHHHHHHHHHHHHHhC-------c-HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhc
Confidence 99888888877766654 2 222333333333333323344556678889999999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 458 FGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 458 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
.+.+.+. +..+|+..|.+.+++.++..+..+ .+||.
T Consensus 145 ~l~~~l~-------------~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 145 PLGTYLS-------------QEFSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred cHHHHHh-------------hhccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999887 456899999988887776665544 56654
No 177
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=5e-10 Score=113.05 Aligned_cols=171 Identities=13% Similarity=0.023 Sum_probs=119.1
Q ss_pred HHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCC
Q 046667 41 CISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120 (540)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 120 (540)
......|.+.++. +.+....++......++..++.++.|+++||+|||++++.+.++.+++.++.+....
T Consensus 289 ~~~~~~p~i~~~~----------g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~ 358 (479)
T PRK10077 289 VVLYYAPEIFKTL----------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY 358 (479)
T ss_pred HHHHHHHHHHHHc----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh
Confidence 3344557776777 777777777777788889999999999999999999999999999888877664321
Q ss_pred CCcchhhHHHHHHHHHHhhcccc-chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 046667 121 NSPKGVMATLCFFRFWLGFGIGG-DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAY 199 (540)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~ 199 (540)
... . ......+-++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+.+.+... +.
T Consensus 359 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~~------- 428 (479)
T PRK10077 359 TQA-P-GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-SW------- 428 (479)
T ss_pred cCc-c-cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cc-------
Confidence 100 0 11222333444443333 3467889999999999999999999999999999987776554310 00
Q ss_pred CCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHhCCCCh
Q 046667 200 EDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMKMPETA 240 (540)
Q Consensus 200 ~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~esp 240 (540)
..+..+|++.|++.++.+++..+. .++.||++
T Consensus 429 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 429 ---------LVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred ---------hhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 022466888888877666655444 34567764
No 178
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.25 E-value=2e-10 Score=114.68 Aligned_cols=176 Identities=11% Similarity=0.045 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh-ccch
Q 046667 296 LHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK-IGRF 373 (540)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~r 373 (540)
+.++..+...+.....+|+...+.+.++.+ .|++... ... .............+++|+++|| +|||
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~-----------a~~-i~~~~~~~~~~~~~~~G~laDr~~G~r 81 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ-----------AFI-TFGAFAALVYGLISIGGYVGDHLLGTK 81 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHH-HHHHHHHHHHHHHhhHHHhhhhccchH
Confidence 345556666666778899888888877654 5554333 111 2222233334445689999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh--hhhhhhHHHHHHHHH
Q 046667 374 AIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAASGKL 451 (540)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~ 451 (540)
+.+..+.++..++.+.+.+... ....+.+.....+.+.....|...+++.|.+|++ .|+.+.++.....++
T Consensus 82 ~~~~~g~~~~~~g~~~~~~~~~-------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 82 RTIVLGAIVLAIGYFMTGMSLL-------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH
Confidence 9999999999998887776431 1112222233334444445566678899999876 457889999999999
Q ss_pred hHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 452 GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 452 g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
|..++|.+.+++.+ ..||+..|++.++..+++.+.....
T Consensus 155 g~~~g~~l~g~l~~-------------~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 155 GSLISLSLAPVIAD-------------KFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHHHHHHHHH-------------hhChHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999984 5689999988765444444443343
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=2.9e-10 Score=112.01 Aligned_cols=160 Identities=12% Similarity=0.109 Sum_probs=110.8
Q ss_pred HhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 315 QNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
.....+.+.++.++++...+ .......++..++.++.|+++||+|||+.+..+....+++.+......
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 99 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVP------------TSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ 99 (406)
T ss_pred HhcchHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc
Confidence 33344556666666554322 244556677788888999999999999999988887777766665543
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCC
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDA 474 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~ 474 (540)
+ ........+..+.......+...+++.|.+|++.|.++.++......++..++|.+.+.+.+
T Consensus 100 -------~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~--------- 162 (406)
T PRK15402 100 -------S-IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH--------- 162 (406)
T ss_pred -------c-HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 1 22222223333333323335566778899999999999999988888999999999998874
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 475 GYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 475 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
..+|+..|++.+++.+++.+..+ ..||++
T Consensus 163 ----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 163 ----VLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred ----ccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 55889999888888777766554 456553
No 180
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.24 E-value=2.8e-10 Score=111.69 Aligned_cols=177 Identities=11% Similarity=0.022 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
++.......+............|.+.++.++++.+.+. ......++..++.++.|+++||+|||+.+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~ 77 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQA------------VMAAYLLTYGLSQLFYGPLSDRVGRRPVIL 77 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 33333333333344444444567777777776655322 555666777888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+.....++.+...... + ...+.+..+..+++.....+....+..|.++.+.++.+.+..+....++..++|
T Consensus 78 ~~~~~~~~~~~~~~~~~-------~-~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 149 (394)
T PRK11652 78 VGMSIFILGTLVALFAH-------S-LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAP 149 (394)
T ss_pred HHHHHHHHHHHHHHHHc-------c-HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777776655433 1 222223333333322222344455677888888999999999999999999999
Q ss_pred HHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 458 FGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 458 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
.+.+.+. +..+|+..|++.+++.++..+... +.||++
T Consensus 150 ~i~~~l~-------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 150 LIGGLLT-------------TLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHH-------------hccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999887 356899999888776665544443 566643
No 181
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.22 E-value=4.3e-10 Score=109.16 Aligned_cols=131 Identities=18% Similarity=0.194 Sum_probs=115.3
Q ss_pred HHHHhhhhh-hcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCC
Q 046667 44 LVTKLLGRI-YYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNS 122 (540)
Q Consensus 44 ~~~~~i~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 122 (540)
...|.+.++ + +.+..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++.++..+.++.
T Consensus 232 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (365)
T TIGR00900 232 ALFPYVQSKYL----------GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPN- 300 (365)
T ss_pred HHhHHHHHHHh----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchh-
Confidence 455666554 5 7889999999999999999999999999999999999998888888887777776531
Q ss_pred cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 123 PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSA 189 (540)
Q Consensus 123 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 189 (540)
++.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+++.+.+.
T Consensus 301 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 301 ----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888999999999999999999999999999999999999999999999999999988653
No 182
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.22 E-value=2.5e-10 Score=109.91 Aligned_cols=162 Identities=10% Similarity=0.038 Sum_probs=108.3
Q ss_pred HHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 046667 312 FYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALA 391 (540)
Q Consensus 312 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~ 391 (540)
+.......|.+.++.++++.+.+. ......++..++.+..|+++||+|||+.+.........+.....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGL------------LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL 74 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 444455667777777776655322 45556667778888999999999999876654443333322111
Q ss_pred hcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 046667 392 IPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTK 471 (540)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~ 471 (540)
... ....+.+.-+..+.+... .........|.+|+++|++++++.+....+|..+++.+.+.+.
T Consensus 75 ~~~--------~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~------- 138 (368)
T TIGR00903 75 DPF--------NYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY------- 138 (368)
T ss_pred Hhc--------cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 111 122233333333333322 2334455589999999999999999999999999999999987
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 472 TDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 472 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
+.+||+..|++.+++.++..++.+ ++||..
T Consensus 139 ------~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 139 ------TAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred ------HccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 367999999998888777766555 677653
No 183
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.21 E-value=5.4e-10 Score=98.98 Aligned_cols=184 Identities=12% Similarity=0.065 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHH
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKV 100 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~ 100 (540)
||..+....+.....+ ....++...|++.+.+ ++|.+|...+.++-.+|..+ .++.|.+.|++|+|.+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l----------~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~ 68 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRL----------GYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV 68 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH
Confidence 3555555555555444 3466778888999999 99999999999999999987 5889999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcc-hhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 101 YGMTLMLMVICSIASGLSFGNSPK-GVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
+.+|.+...+|..+...+-+..-. ..+|.+.+..++.|.+.+....++.....+.|| ++||++.|+.-...+++..+-
T Consensus 69 l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~ 147 (250)
T PF06813_consen 69 LLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIF 147 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHH
Confidence 999999999998887665332211 237888888899988877777888888889997 579999999999999987776
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCCh
Q 046667 180 GIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA 240 (540)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp 240 (540)
..+...+. ++..-+..+.....+.++.++..++++..|
T Consensus 148 t~i~~~~f-----------------------~~~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 148 TQIYSAFF-----------------------GDDPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHc-----------------------CCChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 66555442 112244555555555556555555555443
No 184
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=7.7e-10 Score=102.57 Aligned_cols=177 Identities=12% Similarity=0.174 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM 103 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~ 103 (540)
..++.+-..+.++.+. .++.....-..++ |++..+..++.....+..+++++++|+|.||+|.|+++..
T Consensus 255 ~~FLiA~~~~~DGv~t-il~~~~~fg~~~~----------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 255 VLFLIARFFYIDGVNT-ILAMGGVFGAADL----------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHHHHc----------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 3444444455555543 3333333444577 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHH
Q 046667 104 TLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFA 183 (540)
Q Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 183 (540)
++++..+.++...+... -..+.++-.+.|...|+.+....++..+..|+++-++.+|++....-.+..+||.+-
T Consensus 324 ~lvi~~~~~~~~~~~~~------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 324 GLVILSIAALYLIFLEG------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHHHHccc------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 99999998888877776 367778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCC
Q 046667 184 LIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPET 239 (540)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~es 239 (540)
+.+.+.+++ -|..+....++.++.++....+|++
T Consensus 398 ~v~t~iTg~----------------------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 398 AVITQITGS----------------------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhcc----------------------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999988875 6777777666666666666666654
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.20 E-value=5e-10 Score=109.69 Aligned_cols=163 Identities=14% Similarity=0.146 Sum_probs=112.8
Q ss_pred HHHHHHHhhhHHHHH-HHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 046667 309 DIAFYSQNLFQKDIF-SAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFM 387 (540)
Q Consensus 309 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~ 387 (540)
....+....+.+.++ ++.|+++...+. ......+...+..++.|+++||+|||+.+..+..+.++..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl------------~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~ 90 (400)
T PRK11646 23 VLGFFVVFPLISIRFVDQLGWAAVMVGI------------ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 334444444555544 456776554222 4444455556667889999999999999999998888888
Q ss_pred HHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhcc
Q 046667 388 FALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSK 467 (540)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~ 467 (540)
+.+.... +.+ .+.+..+..+.......+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+
T Consensus 91 ~~~~~~~-------~~~-~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-- 160 (400)
T PRK11646 91 ATMAIAH-------EPW-LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-- 160 (400)
T ss_pred HHHHHhc-------cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 7766543 222 233333333333333445566778899999999999999999999999999999999973
Q ss_pred ccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hccc
Q 046667 468 DKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (540)
++|+..|++.+++.++..++.. +.||
T Consensus 161 ------------~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 161 ------------YDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4788888888777666655444 4554
No 186
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.20 E-value=8e-10 Score=111.85 Aligned_cols=159 Identities=18% Similarity=0.178 Sum_probs=110.2
Q ss_pred HHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcccee
Q 046667 347 AQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTF 426 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (540)
.......++.+++.++.+++.||+|||+.+..+.++..++.++....... ........+++.-+..+++..+..+...
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGS--SPKSVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCc--ccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 35666777888999999999999999999998888888877666554310 0001123344444444555555567778
Q ss_pred eeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccc---cCCC----C---CCCCcchhhHHHHHHHHHHHH
Q 046667 427 VVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKT---KTDA----G---YPPGIGVKNSLIVLGVVNLLG 496 (540)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~---~~~~----~---~~~~~g~~~~~~~~~~~~~~~ 496 (540)
.++.|.+|++.|+++.++.+....+|..+++.+...+....... .+.. . ....++|+..+.+.++..++.
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887665322110 0000 0 011348999998777777766
Q ss_pred HHHHHhcccCC
Q 046667 497 LLFTFLVPESK 507 (540)
Q Consensus 497 ~~~~~~~~~~~ 507 (540)
.++.+++||+.
T Consensus 218 ~~~~~~lpESp 228 (502)
T TIGR00887 218 LYFRLTIPETP 228 (502)
T ss_pred HHHHHhCCCCH
Confidence 66666788863
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.19 E-value=1.4e-09 Score=108.40 Aligned_cols=153 Identities=13% Similarity=0.104 Sum_probs=132.6
Q ss_pred HHHHHHHhhhh-hhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 41 CISLVTKLLGR-IYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 41 ~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
.+...+|.+.+ ++ +.+....|++.+++.+|..++.++.+++.+|+++++.+..+.++++++.+..++++
T Consensus 236 a~~aLlPl~a~~~l----------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~ 305 (524)
T PF05977_consen 236 AVWALLPLFARDVL----------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP 305 (524)
T ss_pred HHHHhhhHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch
Confidence 33456777664 45 78899999999999999999999999999999999999999999999999999998
Q ss_pred CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 046667 120 GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAY 199 (540)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~ 199 (540)
+ .+..++.-++.|++.........+.+.+..|++.|||+++++++....+..+|..+.|.+.+..+
T Consensus 306 ~------~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-------- 371 (524)
T PF05977_consen 306 S------FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-------- 371 (524)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 8 68888899999999988888899999999999999999999999999999999999999976655
Q ss_pred CCCCccccCCCCCcchHHHHHhhhHHHHHHHHH
Q 046667 200 EDDPIASTAPQADYLWRIIVMVGALPAALTYYW 232 (540)
Q Consensus 200 ~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~ 232 (540)
-+..+.+.++..++..++
T Consensus 372 ---------------~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 372 ---------------VRTALLIAGAALLLSALI 389 (524)
T ss_pred ---------------HHHHHHHHHHHHHHHHHH
Confidence 677887766655444333
No 188
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.19 E-value=1.2e-09 Score=107.35 Aligned_cols=140 Identities=8% Similarity=-0.037 Sum_probs=115.7
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+..+.|.+.++..+...++.++.|++.||+|||+.+.++.++.+++..+...+++ .+.+++.+++.|++...
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 323 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT------ALEVVILKMLHAFEVPF 323 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHH
Confidence 355567899999999999999999999999999999999999998888887777777 67888899999998776
Q ss_pred chhhHHHHHhhhcCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
.......+..+..+++.+++..+. .+....+|..+++.+++++.+.. ||+..|.+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-----------------------G~~~~f~~~ 380 (396)
T TIGR00882 324 LLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-----------------------GFQGAYLVL 380 (396)
T ss_pred HHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-----------------------ccHHHHHHH
Confidence 666777788888888888776665 56788999999999999997544 499999987
Q ss_pred hHHHHHHHHH
Q 046667 223 ALPAALTYYW 232 (540)
Q Consensus 223 ~~~~~~~~~~ 232 (540)
++..++..+.
T Consensus 381 ~~~~~i~~~~ 390 (396)
T TIGR00882 381 GCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHH
Confidence 7766654443
No 189
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=7e-10 Score=111.48 Aligned_cols=172 Identities=12% Similarity=0.003 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh-ccchh
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFS-AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK-IGRFA 374 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~r~ 374 (540)
.++......++....+|+...+.+.++. +.|+++... .. .............+++|+++|| +|||+
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a-----------~~-~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS-----------IT-LFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-----------HH-HHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 3455556666677788888888888874 466654431 11 2222222222334578999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh--hhhhhhHHHHHHHHHh
Q 046667 375 IQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAASGKLG 452 (540)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 452 (540)
.+..+.++.+++..++.+... ....+.+.....+.+.....+...++..|.+|++ .++.+.++.+...++|
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~-------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGH-------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 999999888888776665321 1222222222233333334455667888998754 3456788889999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 453 AIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 453 ~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
..++|.+.+++.+ ..||+..|.+.++..+++.+..
T Consensus 163 ~~~gp~i~g~l~~-------------~~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 163 SFFSMLATPWLAA-------------KYGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHHH-------------hhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999984 5689999988776555554433
No 190
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.19 E-value=6.6e-10 Score=109.29 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=102.0
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++..++.++.|+++||+|||+.+..+..+.+++.++..... + ...+.+.-++.+.+.....+..++
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-------~-~~~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT-------S-MTQFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC-------C-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455567778888999999999999999998888777776666543 2 222222223333322222344567
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
++.|.+|++.+++++++.+....++..++|.+.+.+.+ ..||+..|++.+++.+++.+..+ .+||+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------------~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------------FVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 78899999999999999999999999999999998873 56899999998888777766544 56765
Q ss_pred C
Q 046667 507 K 507 (540)
Q Consensus 507 ~ 507 (540)
+
T Consensus 195 ~ 195 (413)
T PRK15403 195 V 195 (413)
T ss_pred c
Confidence 4
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.18 E-value=1.7e-10 Score=115.77 Aligned_cols=136 Identities=15% Similarity=0.076 Sum_probs=104.9
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++.+++.++.|++.||+|||+.+..+.++.+++.++...... ......++.-++.+++.....+....
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG------GGIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH------cCchHHHHHHHHHHHhcccchhhHHH
Confidence 555666778889999999999999999998888777776655433221 11223444445555666666777888
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCC-cchhhHHHHHHHHHHHHHHHHHh
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPG-IGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
++.|.+|++.|++++|+.+....+|.++++.+.+.+.+ . .+|+..|++.+++.++..++.+.
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-------------~~~gw~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE-------------SWGGWPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------ccCCCCeehhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999884 4 38999999888887776665553
No 192
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.6e-11 Score=114.41 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=118.3
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......+...+.++++|++.||+.|++++.+|..+-.++.+..++... .+.+.+.=.+.+.+.....|+..+
T Consensus 73 l~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~--------Fwq~~l~R~~vGiGeAs~~~ia~s 144 (493)
T KOG1330|consen 73 LQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNH--------FWQVLLCRGFVGIGEASYSPIAPS 144 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhccchhhhcccchh
Confidence 556666777888899999999999999999999988888888777652 344555555566777888899999
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
+++|.+|.++|+++.++.+....+|..+|-.+...+.+.+ ..||++|...+++.++..++.+ +.+|.
T Consensus 145 ~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~------------~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 145 LIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT------------FWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred HhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc------------cceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 9999999999999999999999999999888888777432 2499999999999998888887 67776
Q ss_pred CCCChhh
Q 046667 507 KGKSLEE 513 (540)
Q Consensus 507 ~~~~~~~ 513 (540)
+++..++
T Consensus 213 ~rga~~~ 219 (493)
T KOG1330|consen 213 ERGARDE 219 (493)
T ss_pred ccccccc
Confidence 6543333
No 193
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.17 E-value=2e-09 Score=105.07 Aligned_cols=120 Identities=7% Similarity=-0.087 Sum_probs=105.2
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+++++ .+.+++..++.|++.+.
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTA------LPWLIVIQILHCGTFTV 309 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999988888888777 68888899999999998
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIFALIVSSAF 190 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~ 190 (540)
..+....++.+. +++++++..+... ...++|..+|+.+++.+.+..
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999998887 5666788888876 556788899999999996544
No 194
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=1.6e-09 Score=108.07 Aligned_cols=121 Identities=18% Similarity=0.283 Sum_probs=104.0
Q ss_pred ChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccch
Q 046667 66 PPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDY 145 (540)
Q Consensus 66 s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (540)
+..+.+++.+...++..++.+++++++||+|||+++.++.++.+++.++..+.++. .+.+++..++.|++.+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~ 329 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSN-----LPLILVLIILAGFGQNFVT 329 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchh-----HHHHHHHHHHHHHHHHHHH
Confidence 35567788888899999999999999999999999999998888888777665432 5677788889999999999
Q ss_pred hhHHHHHhhhcC-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 146 PLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 146 ~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
+...++++|..+ ++++|.+.++.+....+|..+++.+.+.+.+..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 330 GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999865 5567999999999999999999999999987665
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.17 E-value=3.3e-10 Score=110.53 Aligned_cols=157 Identities=14% Similarity=0.137 Sum_probs=114.3
Q ss_pred hhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 046667 317 LFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDH 396 (540)
Q Consensus 317 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 396 (540)
...|.+.++.++++.+.+ .......++..++.++.|++.||+|||+.+..+.++.+++...+....
T Consensus 12 p~~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQ------------MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--
Confidence 455666666666654422 255566677788889999999999999999998888888877766543
Q ss_pred cccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCC
Q 046667 397 WTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGY 476 (540)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~ 476 (540)
+ .....+..+..+++.....+...+++.|.+|++.|+++.++.+....+|..++|.+.+.+.+
T Consensus 78 -----~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------- 140 (377)
T PRK11102 78 -----T-IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------- 140 (377)
T ss_pred -----c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 1 22223333333333333445566788999999999999999999999999999999999884
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 477 PPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 477 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
..+|+..|++.+++.++..++.. +.+|+
T Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 141 --WFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred --HcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 56888998888887777665554 55554
No 196
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.16 E-value=1e-09 Score=108.86 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=100.0
Q ss_pred HHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeee
Q 046667 350 LIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVP 429 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (540)
....++..++.++.|+++||+|||+.+..+..+.+++.+...+...+............+.-+..+++..+..+...+++
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 44556667899999999999999999999999988888877665421100000111233333444555555667788899
Q ss_pred cccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 430 AEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
.|.+|+++|+.+.++.......|..+++.+...+....... ....+||+..|++.++..++...+....+|.
T Consensus 150 ~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-----~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~ 221 (432)
T PRK10406 150 SEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA-----ELREWGWRIPFALGAVLAVVALWLRRQLDET 221 (432)
T ss_pred HHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-----HHhccchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999888777777777777655544211100 0024699999988777666543322234443
No 197
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.14 E-value=1.2e-09 Score=106.15 Aligned_cols=182 Identities=15% Similarity=0.149 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHH-HHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHH
Q 046667 301 TTSTWFLLDIAFYSQNLFQKD-IFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMG 379 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~ 379 (540)
..+..+......+....+.|. +.++.|+++.+.+. ......++..++.++.|+++||+|||+.+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 73 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGN------------LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLS 73 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhH------------hhHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 344444444556666677775 55667776655332 56666778888899999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 046667 380 FFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFG 459 (540)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 459 (540)
.++..++.+.+.+... ......+..+..+..... .+....++.|.+|+++|+++.++.....++|..+++.+
T Consensus 74 ~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 145 (366)
T TIGR00886 74 LLLLAIPCLWAGLAVQ-------SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFV 145 (366)
T ss_pred HHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHH
Confidence 8888888776655430 122222333333333322 34456778899999999999999998888888888888
Q ss_pred HHHHhhccccccCCCCCCCCcchhhHH-HHHHHHHHHHHHHHH-hccc
Q 046667 460 FLYLAQSKDKTKTDAGYPPGIGVKNSL-IVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~ 505 (540)
.+.+.+......+. ....+|+..| +..+++..+..++.+ +.++
T Consensus 146 ~~~l~~~~~~~~~~---~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 146 MPPIIGSLIFGAGL---PAHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHHHHHHHHhcccc---cccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 77766432110000 1234788777 443444444333333 4444
No 198
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.13 E-value=3e-09 Score=104.21 Aligned_cols=146 Identities=14% Similarity=0.040 Sum_probs=108.1
Q ss_pred CCChhhhhHHHHHHHH-HHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFC-GTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+.+.++.|++...... ...++.++.|++.||+|+|+.+..+..+.++..+......+.........+.....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 8999999999888764 667788999999999999999888776653333322211110000013444555566677778
Q ss_pred cchhhHHHHHhhhcCc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHh
Q 046667 143 GDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMV 221 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~ 221 (540)
...+...+.+.+..++ +++++.+++.+...++|..+|+.+++.+.+..+ |+..|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-----------------------~~~~f~~ 375 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-----------------------YAGGFLS 375 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHH
Confidence 8888888888888876 889999999999999999999999999976544 8899988
Q ss_pred hhHHHHHHHHH
Q 046667 222 GALPAALTYYW 232 (540)
Q Consensus 222 ~~~~~~~~~~~ 232 (540)
.++..++..+.
T Consensus 376 ~~~~~l~a~~~ 386 (390)
T TIGR02718 376 GTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHH
Confidence 77766665443
No 199
>PRK11043 putative transporter; Provisional
Probab=99.13 E-value=1.9e-09 Score=106.04 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=98.9
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++..++.++.|+++||+|||+.+..+..+..++.+...... +.+. ..+..+..+.+.....+...+
T Consensus 46 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~~~~-l~~~~~l~G~~~~~~~~~~~~ 117 (401)
T PRK11043 46 SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE-------SAAQ-LLVLRFVQAVGVCSAAVIWQA 117 (401)
T ss_pred HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc-------CHHH-HHHHHHHHHhhhHHHHHHHHH
Confidence 55566777788899999999999999999988877777766655433 1222 222222222222222234446
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
++.|.+|++.++...+..+....++..++|.+.+.+.+ ..+|+..|++.+++.++..+..++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 118 LVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-------------HFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------cCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 67899999989999999988899999999999999983 5689999988887777766665555443
No 200
>PRK15075 citrate-proton symporter; Provisional
Probab=99.13 E-value=4.7e-09 Score=104.27 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=89.5
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHH-hh-ccCCCCcchhhHHHHHHHHHHhhcc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIA-SG-LSFGNSPKGVMATLCFFRFWLGFGI 141 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~-~~-~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (540)
+.+..+.+++...+.++..++.++.|+++||+|||+++..+.++..+..+. .. ...+. .+..+.+..++.|++.
T Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 345 (434)
T PRK15075 270 HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP----SFARMLAVELWLSFLY 345 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC----chHHHHHHHHHHHHHH
Confidence 788888999999999999999999999999999999987765544332221 11 11111 1334445556666666
Q ss_pred ccchhhHHHHHhhhcCcccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 046667 142 GGDYPLSATIMSEYANKKTRGAFIAAVFA-MQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~ 191 (540)
+...+....++.|.+|+++|++..++... +..++..++|.+.+++.+..+
T Consensus 346 g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 346 GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 66667777889999999999999998644 444457778888888876544
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.13 E-value=1.7e-09 Score=105.95 Aligned_cols=186 Identities=13% Similarity=0.015 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHH
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~ 378 (540)
+..+..++..++.........|.+.++.+.++.+ .........++..++.+..+++.||+|||+.+..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~ 73 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3344445555555555556677777777766544 2336677778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH
Q 046667 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF 458 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 458 (540)
+..+.+++..++..... ..++.......+..+.+.....+....++.+..|++.+++..++.+....+|..++|.
T Consensus 74 g~~l~~~g~~l~~~~~~-----~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAE-----IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888766543221 0123233333333333333333445566778889999999999999999999999999
Q ss_pred HHHHHhhccccccC--C-----------CCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 459 GFLYLAQSKDKTKT--D-----------AGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 459 i~~~~~~~~~~~~~--~-----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
+.+.+......... . ....+..+|+.+|++.+++.++..++..
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988643210000 0 0000224689999888877766554443
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.12 E-value=1.1e-09 Score=107.05 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=96.8
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......+...+..++.|+++||+|||++++.+..+.+++.+.+.... + . .+.-+..+.+.....|...+
T Consensus 43 ~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~-------~-~---~~~r~l~G~~~a~~~pa~~a 111 (393)
T PRK11195 43 LQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI-------H-P---LLAYGLVGIGAAAYSPAKYG 111 (393)
T ss_pred HHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH-------H-H---HHHHHHHHHHHHHHHHHHHH
Confidence 44555567777888999999999999999999888777665544432 1 1 12223334445556678888
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
++.|.+|+++|++++|+.+....++..+||.+.|.+.+ +.+...+.+.+.+.+++.+....+||.
T Consensus 112 ~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~--------------~~~~~~~~i~~~~~~~~~~~~~~l~~~ 176 (393)
T PRK11195 112 ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD--------------PHAEAALAVCALIYLLAALFNLFIPRL 176 (393)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999985 235556655555544444444456654
No 203
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.11 E-value=2.6e-09 Score=103.91 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=95.9
Q ss_pred HHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeee
Q 046667 349 TLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVV 428 (540)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (540)
.....+...+..+..|++.||+|.|+.+.++..+..+..+.+.+... ...+++....+..++.++.+. ..+.....
T Consensus 76 ~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~---~~~~s~~~lli~r~l~Gigg~-~f~~~~~~ 151 (462)
T PRK15034 76 TALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQ---NPNTPFGIFIVIALLCGFAGA-NFASSMGN 151 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc---ccCCCHHHHHHHHHHHHHHHH-hHHHHHHH
Confidence 33344445566778899999999999999888888777776665310 001123333333333333322 44566778
Q ss_pred ecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHh-----hccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 429 PAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLA-----QSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
+++.+|+++||++.|+....+++|..+++.+.+.+. +..+.........+..+++.+.++...+.++..++.++.
T Consensus 152 vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 152 ISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998788888877776665544 222211111001134568888888877777777666643
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=2.3e-09 Score=108.89 Aligned_cols=139 Identities=15% Similarity=0.090 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHh
Q 046667 74 NGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMS 153 (540)
Q Consensus 74 ~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (540)
.....+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. ..+..++.-++.+++.+..++....+..
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD----LYFLRTALAVLGKFGITSAFQMVYLYTA 436 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC----chHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334456677888999999999999999999999999988888777652 0244455556677777777889999999
Q ss_pred hhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH
Q 046667 154 EYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR 233 (540)
Q Consensus 154 e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 233 (540)
|.+|++.|++++++.+....+|.+++|.+.+ +.. .++..++++.+...++..+..
T Consensus 437 e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~------------------------~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 437 ELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE------------------------KWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred ccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH------------------------HHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888 421 225677777777666666666
Q ss_pred HhCCCChh
Q 046667 234 MKMPETAR 241 (540)
Q Consensus 234 ~~~~esp~ 241 (540)
+++||+..
T Consensus 492 ~~lpet~~ 499 (505)
T TIGR00898 492 LFLPETKG 499 (505)
T ss_pred HcCcCCCC
Confidence 77888643
No 205
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.10 E-value=1e-09 Score=90.28 Aligned_cols=129 Identities=19% Similarity=0.233 Sum_probs=96.0
Q ss_pred HhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeeccc
Q 046667 353 LCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEI 432 (540)
Q Consensus 353 ~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (540)
.++.+++.++.+++.||+|||+.+..+.....++.+...... +.+ ......+..+.......+....+..|.
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-------NIT-VLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-------cHH-HHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 455667788999999999999999888877777766655433 122 222333333333333446677788999
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 433 FPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
+|++.|+++.++.+....++..++|.+.+.+. +..+|+..+.+.+.+.+++.+..++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLA-------------QFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh-------------cccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999987 3557888888888777777666653
No 206
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.05 E-value=1.2e-08 Score=95.69 Aligned_cols=119 Identities=13% Similarity=0.192 Sum_probs=97.4
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.++++.++..+.+..+..++.++.+++.||+|+||.+.++.++..++.++....++ .. ...+-++.|++.+.
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~------~~-~~~~~~l~g~~~s~ 246 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG------YV-AMWFVLALGLFNSI 246 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC------HH-HHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999998888888887766666554 22 22345588999999
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
.+|...+...+..|++ .+++.++. ....+|..++|.+.+.+.+..+
T Consensus 247 i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 247 MFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 9999999999988754 45667765 5667899999999888865433
No 207
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=2.2e-08 Score=98.44 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=99.9
Q ss_pred CCChhhhhHHHHHHH-HHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHh---hccCCCCcchhhHHHHHHH----H
Q 046667 64 SLPPNVSAAVNGVAF-CGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIAS---GLSFGNSPKGVMATLCFFR----F 135 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~~r----~ 135 (540)
+.+..+.+++.+... ++..++.++.|++.||+|||+.+..+.++..+..+.. ++.++. .+.+++.- +
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~ 315 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH-----LWTMALAIGIENL 315 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHH
Confidence 899999999987654 5689999999999999999998887777666554433 343321 35444444 4
Q ss_pred HHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcch
Q 046667 136 WLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLW 215 (540)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gw 215 (540)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.+++.+.+.. ||
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~-----------------------G~ 368 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAY-----------------------GW 368 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh-----------------------Ch
Confidence 55566666677777777777776554 4555556777776777888886544 49
Q ss_pred HHHHHhhhHHHHHHHHHHHhC
Q 046667 216 RIIVMVGALPAALTYYWRMKM 236 (540)
Q Consensus 216 r~~f~~~~~~~~~~~~~~~~~ 236 (540)
+..|.+.++.+++.++..+..
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887766655433
No 208
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.04 E-value=1.7e-08 Score=96.52 Aligned_cols=161 Identities=8% Similarity=0.029 Sum_probs=118.5
Q ss_pred hhhHHHHHHHhcCCCcc-cchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 316 NLFQKDIFSAVGWIPSA-KTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 316 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
....|.+.++.|+++.+ .+. .......+..+..+.+|+++||+|.|+.+..+.+..++..+++++..
T Consensus 46 s~a~p~L~~elglT~~qv~G~------------I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNE------------IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcch------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666778888876 444 55556667777788999999999999999999988888888887754
Q ss_pred cccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCC
Q 046667 395 DHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDA 474 (540)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~ 474 (540)
....+.+.-++.+.+..... ....++...+|++.|+++.|+.+....+|.++++.+.+.+.. .+
T Consensus 114 --------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~g------ 177 (511)
T TIGR00806 114 --------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-LG------ 177 (511)
T ss_pred --------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC------
Confidence 24445555556666666555 677888999999999999999999999999999999999542 11
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 046667 475 GYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKG 508 (540)
Q Consensus 475 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (540)
.-.|....++..+...+++++.+++|..++
T Consensus 178 ----Wr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 178 ----WISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred ----chhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 123333445555566667777778885443
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=1.8e-08 Score=100.55 Aligned_cols=124 Identities=10% Similarity=0.011 Sum_probs=101.0
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+....++......++..++.++++++.||+|+|+++.++.++..++.++..+.+. ..++.+++..++.|+|.+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~----~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 260 NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSV----WSLPVALVALAIASIGQGV 335 (448)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----hhHHHHHHHHHHHHHHHHH
Confidence 555555555555556778889999999999999999999999998888877776542 1156677778899999999
Q ss_pred chhhHHHHHhhhcCcc-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 144 DYPLSATIMSEYANKK-------TRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
..+...++..|..|.+ ++|...++.+....+|..+|+.+.+.+.+..+
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999988754 35999999999999999999999998887665
No 210
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.03 E-value=6.1e-09 Score=96.70 Aligned_cols=155 Identities=16% Similarity=0.143 Sum_probs=111.3
Q ss_pred hhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 046667 316 NLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYD 395 (540)
Q Consensus 316 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 395 (540)
....+.+-++.++++.+.. . +.....+...+.++..|.+.||+|.|+....+.++..+-.+.+.+...
T Consensus 34 s~l~~~i~~~~~LS~~q~~-----------l-l~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~ 101 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKG-----------L-LVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT 101 (417)
T ss_pred HHHHhhhccccCCCHHHHH-----------H-HHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc
Confidence 3333444455666665532 2 555555666778899999999999999999998888888777777663
Q ss_pred ccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCC
Q 046667 396 HWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAG 475 (540)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~ 475 (540)
+. +. +...+..++.++.+ +.+.+...++++.+|++.+|.++|+.. .+++|..+..++.+.+..
T Consensus 102 ~~----~~-~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~---------- 164 (417)
T COG2223 102 YP----ST-WQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV---------- 164 (417)
T ss_pred CC----ch-HHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH----------
Confidence 21 22 23333334333333 345677788999999999999999999 999999999999999985
Q ss_pred CCCCcc---hhhHHHHHHHHHHHHHHHHHh
Q 046667 476 YPPGIG---VKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 476 ~~~~~g---~~~~~~~~~~~~~~~~~~~~~ 502 (540)
..+ |+.+..+..+..++..+..++
T Consensus 165 ---~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 165 ---AFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred ---HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345 788887777777777666663
No 211
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.03 E-value=8.7e-10 Score=100.21 Aligned_cols=113 Identities=13% Similarity=0.058 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcc
Q 046667 344 IARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNA 423 (540)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (540)
.+++......+..++.++..|.++||+|||.++.++.+..++...+.+... +....+..=+.++.+. +...
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--------~F~afv~aR~l~Gi~k-gnl~ 139 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--------NFAAFVLARFLGGIFK-GNLS 139 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhhhhcc-CchH
Confidence 466678888889999999999999999999999999888888777766654 2222222233344433 3456
Q ss_pred ceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 424 TTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
+..++++|+++++.|+.+++..++...+|.++||.+.|++.+
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 778999999999999999999999999999999999999986
No 212
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.03 E-value=9.6e-09 Score=100.72 Aligned_cols=198 Identities=14% Similarity=0.007 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHh----hccch
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFID----KIGRF 373 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d----~~g~r 373 (540)
++......+...+.+.....+.+.+++..|.++.. .........+..++..++.|+++| |+|||
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR 73 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR 73 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh
Confidence 34444445555556666666777788777765543 333566667778888899999999 59999
Q ss_pred hHHHHH-HHHHHHHHHHHHhcccccc-------cCCchh--HHHHHHHHHHHHhhcCCccceeeeecccCchhhh--hhh
Q 046667 374 AIQMMG-FFFMTVFMFALAIPYDHWT-------HKSNRL--GFVIIYSLTFFFANFGPNATTFVVPAEIFPARLR--STC 441 (540)
Q Consensus 374 ~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~ 441 (540)
+.++.+ .....+++.++.+...... .....+ ...++.....-+......+...+++.|..|+++| +.+
T Consensus 74 rp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a 153 (477)
T TIGR01301 74 RPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence 998875 4455555555544332110 000111 1111111111122222334456889999998765 679
Q ss_pred hHHHHHHHHHhHHHHHHHHHHH--hhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 442 HGISAASGKLGAIVGAFGFLYL--AQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 442 ~g~~~~~~~~g~~i~~~i~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
.++.+...++|+++++.+.+.. .+..+.........-..+++..|++.+++.+++.+... ..+|..
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 9999999999999999988865 22211111111001123678889988888888877776 667754
No 213
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.5e-09 Score=106.13 Aligned_cols=176 Identities=15% Similarity=0.199 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcc--hhHHH
Q 046667 24 AIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLG--RKKVY 101 (540)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G--rr~~~ 101 (540)
.++..+++..+..+........+|...++. +.+..+.+.+.++..+...++.++.|+++|+.. ++.+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~----------g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~ 368 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSL----------GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLF 368 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHH
Confidence 455556666666777777788888888888 899999999999999999999999999999987 55677
Q ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHH
Q 046667 102 GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (540)
.+++++.+++.+.++++++ ++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++.++||+
T Consensus 369 ~~~ll~~gl~~~~~p~~~~------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpP 442 (509)
T KOG2504|consen 369 LLTLLIAGLARLFLPFATT------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPP 442 (509)
T ss_pred HHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcc
Confidence 8889999999999999999 7999999999999999998888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC
Q 046667 182 FALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP 237 (540)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 237 (540)
+++.+.+..++ |...|+..++..++..+.++..+
T Consensus 443 iag~~~d~tg~----------------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 443 IAGLLYDITGN----------------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cceeeeeccCC----------------------eeeehhhcChHHHHHHHHHHHhH
Confidence 99987655443 89999998888777776665555
No 214
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.00 E-value=5.3e-09 Score=107.67 Aligned_cols=180 Identities=16% Similarity=0.028 Sum_probs=126.9
Q ss_pred hhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 046667 316 NLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYD 395 (540)
Q Consensus 316 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 395 (540)
....+.+-++.++++.+.+. ......++.+++.++.+++.||.+||+.+.++.++.+++.++.++.+.
T Consensus 53 ~~~l~~iek~F~lss~~~G~------------i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGL------------INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HhhchhhhhhhCCCCCccee------------eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 34455666667777766544 555666777788889999999999999999999999999888877641
Q ss_pred cc----c--------------------c-----------------C--CchhHHHHHHHHHHHHhhcCCccceeeeeccc
Q 046667 396 HW----T--------------------H-----------------K--SNRLGFVIIYSLTFFFANFGPNATTFVVPAEI 432 (540)
Q Consensus 396 ~~----~--------------------~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (540)
.. . . . ...+..+++.-++.+++.....++..+++.|.
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~ 200 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDF 200 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhcc
Confidence 10 0 0 0 01233445556666677777778888999999
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccc----c----CCCCCCCCc-chhhHHHHHHHHHHHHHHHHHhc
Q 046667 433 FPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKT----K----TDAGYPPGI-GVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~----~----~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
+|++.|+.+.|+.+....+|..+++.+.+.+.+...+- . ..+.-+... +|+..|++.+++.++..+.++++
T Consensus 201 ~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 201 AKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred CCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999988653210 0 001101112 37778888888877766665666
Q ss_pred ccCC
Q 046667 504 PESK 507 (540)
Q Consensus 504 ~~~~ 507 (540)
|++.
T Consensus 281 p~~l 284 (633)
T TIGR00805 281 PKAL 284 (633)
T ss_pred cccc
Confidence 6543
No 215
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.00 E-value=9e-07 Score=90.61 Aligned_cols=154 Identities=14% Similarity=0.058 Sum_probs=119.9
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhh-cchhHHHHHHHHHHHHHHHHhhccCCCCc--chhhHHHHHHHHHHhhc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYGMTLMLMVICSIASGLSFGNSP--KGVMATLCFFRFWLGFG 140 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~ 140 (540)
+.+.+....+...+....-+..+++|+++|+ +||++.++++.++..+|.++.++...... .......+++-.+..+|
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G 98 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG 98 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999997 59999999999999999988877532100 01123466777888899
Q ss_pred cccchhhHHHHHhhhcCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH
Q 046667 141 IGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI 217 (540)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~ 217 (540)
.|+.-++..+...|.++++ +|.....++..+.++|..+++++..++....+.. ....+|..
T Consensus 99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f----------------g~~~~~~~ 162 (654)
T TIGR00926 99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF----------------GCQDCYPL 162 (654)
T ss_pred ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----------------ccCcchHH
Confidence 9999999999999999754 3667888888999999999988888775332110 12346999
Q ss_pred HHHhhhHHHHHHHHHH
Q 046667 218 IVMVGALPAALTYYWR 233 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~ 233 (540)
.|.+.++..+++++..
T Consensus 163 aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 163 AFGVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888777665554
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.00 E-value=2.5e-08 Score=96.47 Aligned_cols=153 Identities=14% Similarity=0.119 Sum_probs=121.9
Q ss_pred CChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHH----HHHHHHHhhc
Q 046667 65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATL----CFFRFWLGFG 140 (540)
Q Consensus 65 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l----~~~r~l~G~~ 140 (540)
.+....+.+.+...++-...-...+++..|+|.|+++.++.+.+++=..+.+...+. .+.. ++...++|+.
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~-----~~~~~~~~~l~q~lhG~t 314 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP-----WPFIVALQLLGQLLHGLT 314 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC-----cHHHHHHHHHHHhhhhHH
Confidence 666778888888888888999999999999999999999999999988888887321 2332 3345679999
Q ss_pred cccchhhHHHHHhhhcCcccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHH
Q 046667 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFA-MQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIV 219 (540)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f 219 (540)
.+....+...++.+.+|++.|+++.+++.+ ..++|..+|..++|++.+..+. .....|...+
T Consensus 315 f~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~-----------------~~~~~~~~~~ 377 (400)
T PF03825_consen 315 FGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA-----------------RGMFDWSAVF 377 (400)
T ss_pred HHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc-----------------hhhhhHHHHH
Confidence 999999999999999999999999999876 4689999999999999887663 2234577777
Q ss_pred HhhhHHHHHHHHH-HHhCCCC
Q 046667 220 MVGALPAALTYYW-RMKMPET 239 (540)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~es 239 (540)
.+.+...++..++ .++++|+
T Consensus 378 ~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 378 LVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHhhccCC
Confidence 7766666554443 4445553
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.00 E-value=1.6e-08 Score=113.69 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=107.3
Q ss_pred CCChh-hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPN-VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~-~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+.+.. +.+++.+...++..++.++.|+++||+++|+.+.++.++.+++.++..+..+ .+.++++.++.|++.+
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPS------LASVLVLFFLFGFSAG 337 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHH
Confidence 78888 9999999999999999999999999999999999988888888888887776 6788888899999999
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
...+...+++.+.+|+++||+++++.+....+|.++++.+++.+.
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888877664
No 218
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.99 E-value=1.2e-08 Score=98.56 Aligned_cols=133 Identities=12% Similarity=0.129 Sum_probs=106.4
Q ss_pred HHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHHHHHHhhccCC
Q 046667 42 ISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVICSIASGLSFG 120 (540)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~~ 120 (540)
....+|.+.++. +.+..+.+.+.+...++..+++++.|++.||+ +||+.+..+.++.+++.++..+.++
T Consensus 216 ~~~~lp~~~~~~----------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 216 LIGWLPAILISH----------GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 334566666666 78999999999999999999999999999999 5677777888888888777776655
Q ss_pred CCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
. ... ..-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.+..+
T Consensus 286 ~------~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 286 H------GLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred h------HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 222 24577899999999888888776655 5667889999888888999999999999987665
No 219
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.98 E-value=2.4e-08 Score=100.26 Aligned_cols=123 Identities=11% Similarity=0.059 Sum_probs=97.8
Q ss_pred ChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhc---cCCCCcchhhHHHHHHHHHHhhccc
Q 046667 66 PPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGL---SFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 66 s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ... +..+.+++.-++.|++.+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~l~g~~~~ 339 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP----HNALLIVIAGILLNIGTA 339 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc----hhHHHHHHHHHHHHHHHH
Confidence 3456677777777889999999999999999999999888877766655432 111 115667777788999999
Q ss_pred cchhhHHHHHhhhcC-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046667 143 GDYPLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNA 192 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~ 192 (540)
...+...++++|..+ .++.|...+......-+|..+++.+.+++.+..+.
T Consensus 340 ~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 340 LFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999966 33446689999999999999999999999877663
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.97 E-value=6.9e-08 Score=91.77 Aligned_cols=148 Identities=11% Similarity=0.093 Sum_probs=122.3
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.+....|.+.+...+.-++...+..++.+|+|.|+.++++..++.+=.++++++++ .+.+.+.+.+.|+-.+.
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~------~~~i~~~klLH~~e~~l 328 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN------PWVISLIKLLHALEFPL 328 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S------HHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc------hHHHHHHHHHHHHHHHH
Confidence 356677999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred chhhHHHHHhhhcCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
.......|+.+.+|+|..++...+ .+...++|..+.+.++|.+-+..+ .+..|++.
T Consensus 329 ~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-----------------------~~~tylim 385 (412)
T PF01306_consen 329 LLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-----------------------FQHTYLIM 385 (412)
T ss_dssp HHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHH
T ss_pred HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-----------------------cHHHHHHH
Confidence 999999999999999887777777 468888999999999999966554 88888886
Q ss_pred hHHHHHH-HHHHHhCCCCh
Q 046667 223 ALPAALT-YYWRMKMPETA 240 (540)
Q Consensus 223 ~~~~~~~-~~~~~~~~esp 240 (540)
+.+.++. ++..+.+++.+
T Consensus 386 g~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 386 GLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHheeeecCCC
Confidence 6665554 44455565543
No 221
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.96 E-value=9e-07 Score=85.35 Aligned_cols=382 Identities=11% Similarity=0.044 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHH
Q 046667 27 VAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLM 106 (540)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~ 106 (540)
.+..+.++...+.-+.....+....+.++ -+---.+...-+-.+...++++..|.+.||..|.+++..+.+
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p---------~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFP---------GSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 34455666666666666777766655532 122233444444555678888999999999999998777765
Q ss_pred HHHHH----HHHhh--ccCCCCc---chhhHHHHHHHHHHhhcccc-chhhHHHHHhhhcC------cccchhHHHHHHH
Q 046667 107 LMVIC----SIASG--LSFGNSP---KGVMATLCFFRFWLGFGIGG-DYPLSATIMSEYAN------KKTRGAFIAAVFA 170 (540)
Q Consensus 107 ~~~i~----~~~~~--~~~~~~~---~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~e~~~------~~~r~~~~~~~~~ 170 (540)
..-++ +.+.. +...... ......+++.-.+.|.-.-. ......+.=.||.. ++.+.+..+..--
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 54332 22222 1111100 01112222222222221111 11222223345542 3444556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH-HHh----CCCChhhHHH
Q 046667 171 MQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW-RMK----MPETARYTAL 245 (540)
Q Consensus 171 ~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~----~~esp~~~~~ 245 (540)
.-.+.-+++|++.+.+....+ .+....+.+...++.++. .++ ....|+ +
T Consensus 157 IDL~ckllaPl~vG~l~t~~s-----------------------~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~---L 210 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMTFAS-----------------------PVIAAIFIAGWNLASVFVEYFLLARVYNSVPA---L 210 (432)
T ss_pred HHHHHHHHHHHHHHHHhhccC-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH---h
Confidence 667889999999999865433 566655555555444333 111 122332 1
Q ss_pred hhccHHHHHHHHHHHHhhhc-hhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 046667 246 VAKNAKQAASDMSKVLQVEL-EAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS 324 (540)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (540)
..+++++..+...+..+... +......+...+.-....+.++.....+ .+...+...+..+...+....+..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~----vflas~alalLY~TVLsf~~lmt~yl~ 286 (432)
T PF06963_consen 211 AVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQP----VFLASFALALLYFTVLSFGGLMTAYLK 286 (432)
T ss_pred cCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCH----HHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 11111110000000000000 0000000000000000000011111111 111111111111222233344555666
Q ss_pred HhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCC--c
Q 046667 325 AVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKS--N 402 (540)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 402 (540)
+.|+++...+. .-....+.++.++++..++.+|+|..+.-.++......++.+...... .+..+ .
T Consensus 287 ~~G~s~~~igi------------~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~-~~~~~~~~ 353 (432)
T PF06963_consen 287 SQGYSPSVIGI------------FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFW-APGSPFSS 353 (432)
T ss_pred HCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHh-cCCCCchh
Confidence 66776665332 445566677889999999999999988877777766555544433221 11111 1
Q ss_pred hhHHHHHHHHH-HHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 403 RLGFVIIYSLT-FFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 403 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
......+..+. .=++-.+.--...-+.+|..|+++||+..|+-+..+++.-.+.-.+.
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 11222333334445778999999999999999999998877765543
No 222
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.96 E-value=1.5e-08 Score=98.03 Aligned_cols=122 Identities=12% Similarity=0.007 Sum_probs=95.3
Q ss_pred HHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHH-HHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC-
Q 046667 42 ISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAF-CGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF- 119 (540)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~- 119 (540)
.....|...+++ +.+..+.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+..
T Consensus 228 ~~~~~~~~l~~~----------g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~ 297 (356)
T TIGR00901 228 ATVLTTLFLLDM----------GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS 297 (356)
T ss_pred HHHHHHHHHHHc----------CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455554556 899999998888765 67889999999999999999999888888877766555431
Q ss_pred CCC----cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHH
Q 046667 120 GNS----PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (540)
Q Consensus 120 ~~~----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 173 (540)
+.. .....+.+..+.++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 100 001156788888999999999999999999999999999999999877554
No 223
>PRK10133 L-fucose transporter; Provisional
Probab=98.96 E-value=2.8e-08 Score=98.34 Aligned_cols=150 Identities=9% Similarity=-0.058 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH
Q 046667 298 LLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~ 377 (540)
+.......+...+.........|.+-++.+.++.+. ........++..++.++.|++.||+|||+.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~------------gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~ 95 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA------------GLIQSAFYFGYFIIPIPAGILMKKLSYKAGII 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 344444555555666667777888866777665542 33666777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHH
Q 046667 378 MGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGA 457 (540)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 457 (540)
.+..+.+++.+++..... ...+....+..+..+.+.....+....++.|..|++.|...+++.+....+|..+++
T Consensus 96 ~g~~~~~~~~~l~~~~~~-----a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~ 170 (438)
T PRK10133 96 TGLFLYALGAALFWPAAE-----IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAV 170 (438)
T ss_pred HHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999988888866532110 012333333333333333333445556667777777777789999999999999999
Q ss_pred HHHHHHh
Q 046667 458 FGFLYLA 464 (540)
Q Consensus 458 ~i~~~~~ 464 (540)
.+.+.+.
T Consensus 171 ~~g~~l~ 177 (438)
T PRK10133 171 VFGQSLI 177 (438)
T ss_pred HHHHHHH
Confidence 9887665
No 224
>PTZ00207 hypothetical protein; Provisional
Probab=98.95 E-value=1.5e-08 Score=101.57 Aligned_cols=167 Identities=11% Similarity=0.066 Sum_probs=103.9
Q ss_pred HHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 046667 309 DIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMF 388 (540)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~ 388 (540)
....|....+.+.+-++.|++..+.+ .+... .... ....++.|++.||+|+|+++.++.++..++.+
T Consensus 40 ~g~~y~fsv~s~~L~~~lgls~~~l~-----------~i~sv-g~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~l 106 (591)
T PTZ00207 40 TSFMYAFNLISGAMQARYNLTQRDLS-----------TITTV-GIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTL 106 (591)
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHHH-----------HHHHH-HHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34556777888888777787765522 21221 1111 12445689999999999999999999999988
Q ss_pred HHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 389 ALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
+..+...... ..+.+.+.++.++.+.+.....+.....+.+.+| +.||++.|+......+|+++.+.+...+.+
T Consensus 107 l~ala~~~~i--~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--- 180 (591)
T PTZ00207 107 LFALTFQEVI--EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--- 180 (591)
T ss_pred HHHHHhcccc--cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 8777521100 0123333333333333333233344455678887 679999999999999999865555444442
Q ss_pred cccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hccc
Q 046667 469 KTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPE 505 (540)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (540)
.+++..|++.+++.++..++.+ +++.
T Consensus 181 -----------~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 181 -----------DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred -----------HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 1456677777777766665555 4443
No 225
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.94 E-value=9.9e-08 Score=92.63 Aligned_cols=167 Identities=19% Similarity=0.164 Sum_probs=118.5
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
.........+-++- +++..+..+......+...++.+++..+.||+|||+.++.+..++.+..+++....
T Consensus 287 ~ai~~Yst~i~~~a----------G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 287 NAIFFYSTSIFKTA----------GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred ceeHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555555 89999999999999999999999999999999999999999999988887776543
Q ss_pred CCCcch--hhH-HHHHHHHH--HhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 046667 120 GNSPKG--VMA-TLCFFRFW--LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAF 194 (540)
Q Consensus 120 ~~~~~~--~~~-~l~~~r~l--~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 194 (540)
...... ... ..+++.++ ..++.| ..|...-+.+|.+|++.|..++++..+...++..+-...-..+.+..+
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G-~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g--- 432 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIG-PGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG--- 432 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcC-CCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 210000 011 12333333 333333 257888899999999999999999988888888777766666654443
Q ss_pred CCCCCCCCCccccCCCCCcchHHHHHhhhHHHHH-HHHHHHhCCCChh
Q 046667 195 KAPAYEDDPIASTAPQADYLWRIIVMVGALPAAL-TYYWRMKMPETAR 241 (540)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~-~~~~~~~~~esp~ 241 (540)
= +.|++..+++++ .+..++.+|||..
T Consensus 433 --------------------~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 433 --------------------P-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred --------------------c-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 2 566665555555 4555678999864
No 226
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=6.6e-08 Score=91.58 Aligned_cols=162 Identities=27% Similarity=0.374 Sum_probs=127.9
Q ss_pred HHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCCh--hhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHH
Q 046667 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPP--NVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMV 109 (540)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~ 109 (540)
.+...++........+.+..++ +.+. .+.++..+.+.++..++.++.|.++||+|||+.+..+.....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTL----------SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHc----------CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 3333466666667777777776 4444 588999999999999999999999999999988888887666
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCc-ccchhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 046667 110 ICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFA-MQGFGILAGGIFALIVS 187 (540)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~ 187 (540)
++.+++++..+ ...+.+++.|++.|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+.
T Consensus 81 ~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 81 LGTLLLALAPN----VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667766665 1268999999999999999999999999999998 678999998888 58889999998877776
Q ss_pred HHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHH
Q 046667 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAAL 228 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 228 (540)
.. . ..+||..|.+.......
T Consensus 157 ~~-~--------------------~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 157 GA-L--------------------LWGWRAAFLLAALLGLL 176 (338)
T ss_pred HH-H--------------------hcchHHHHHHHHHHHHH
Confidence 54 2 34599977665555443
No 227
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1.2e-08 Score=100.02 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=112.2
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
.......|.+++.+.++++.||+|-|+++..+.++.+++.++....... ....+++.=++.++......|....
T Consensus 78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 78 IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------GFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------cchhhHHHHHHhHHHHhHHHhhhhc
Confidence 4555667888899999999999999999999999988888887765521 1123445555555666666788888
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
+..+-.|+++|++..++.....++|.+++-.+.|.+.+ ..+||+..|++.+++.++-.+++++
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~------------s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE------------SSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc------------cCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 3479999999999999888877773
No 228
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=9.6e-08 Score=95.23 Aligned_cols=119 Identities=16% Similarity=0.177 Sum_probs=94.2
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhcc-CCCCcchhhHHHHHHHHHHhhccccchhh
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLS-FGNSPKGVMATLCFFRFWLGFGIGGDYPL 147 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (540)
..+.+.....+...++.+++++++||+|+|+.+..+.++..+..+...+. ++. .+.+++..++.|++.+...+.
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~g~~~~~~~~~ 339 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSN-----VWLIFALNILFNFIQNLTTPL 339 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcch-----HHHHHHHHHHHHHHHHHHHHH
Confidence 44556667778888899999999999999999988887666544433332 221 677788889999999999999
Q ss_pred HHHHHhhhcC-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046667 148 SATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNA 192 (540)
Q Consensus 148 ~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~ 192 (540)
..++++|..+ +++.|...+.......+|..+|+.+++.+.+..+.
T Consensus 340 ~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 340 QWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999886 23346778888899999999999999999887764
No 229
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.90 E-value=2.9e-08 Score=111.09 Aligned_cols=118 Identities=17% Similarity=0.076 Sum_probs=102.2
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhcc--------------------CCCCc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLS--------------------FGNSP 123 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--------------------~~~~~ 123 (540)
+.+..+.|++.+.+.++..++.++.|+++|+.++++.+..+.++.+++.+..++. .+
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH--- 333 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---
Confidence 7889999999999999999999999999998888777666666666655544442 33
Q ss_pred chhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 124 KGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
.+.+++.-++.|++.+...+...+++.+.+|+++||+++|+.+....+|..+++++.+.+.
T Consensus 334 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 334 ---GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred ---cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888899999999999999999999999999999999999999999999999988875
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.88 E-value=2.2e-08 Score=99.32 Aligned_cols=149 Identities=13% Similarity=0.178 Sum_probs=121.7
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHH
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLML 107 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~ 107 (540)
..+..++............+...++.. +.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl---------~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~ 299 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVL---------GNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLL 299 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHh---------cCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHH
Confidence 333444444555555555566555541 222 5778888899999999999999999999999999999999
Q ss_pred HHHHHHHhhccC--CCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCc-------ccchhHHHHHHHHHHHHHHH
Q 046667 108 MVICSIASGLSF--GNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANK-------KTRGAFIAAVFAMQGFGILA 178 (540)
Q Consensus 108 ~~i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-------~~r~~~~~~~~~~~~~G~~~ 178 (540)
.+++.++..+.+ + .+.+++.-++.|++.+...+...++++|..+. ++.|...+.......+|..+
T Consensus 300 ~~~~~~~~~~~~~~~------~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~l 373 (428)
T PF13347_consen 300 AALGFLLLFFLGPGS------PWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGL 373 (428)
T ss_pred HHHHHHHHHHHHhhh------HHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHH
Confidence 999999988886 5 79999999999999999999999999998873 34589999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 046667 179 GGIFALIVSSAFNA 192 (540)
Q Consensus 179 g~~~~~~l~~~~~~ 192 (540)
++.+.+.+....+.
T Consensus 374 a~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 374 AGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999988877664
No 231
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1.7e-08 Score=87.87 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=96.6
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHH-HHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLM-LMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
++|+...+.+.+....-.++.+++.|.++||+|++.+.+.+.. ...++.....++ ++.=..+..+.|+...
T Consensus 296 GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--------~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--------FLSPYTSMTFLGLSYS 367 (459)
T ss_pred CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--------hccHHHHHHHHhhhHH
Confidence 9999999999999999999999999999999999977666544 444454444443 2444566678888877
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSA 189 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 189 (540)
.........++...|.++.|++.+..+...++|..+-+++++++.+.
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 66666777888899999999999999999999999999999998643
No 232
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.85 E-value=6.6e-05 Score=73.58 Aligned_cols=123 Identities=8% Similarity=-0.029 Sum_probs=89.3
Q ss_pred hhhhhHHHHHHHHHHHHh-hhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhcc--CCCCcc---------------h---
Q 046667 67 PNVSAAVNGVAFCGTLAG-QLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLS--FGNSPK---------------G--- 125 (540)
Q Consensus 67 ~~~~g~~~s~~~~~~~i~-~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~---------------~--- 125 (540)
...+.++-+...+..++. .++.+++++|++|++++-+....+...-+++++. ++.+.. +
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 357889988888877766 8999999999999999887776666655555544 110000 0
Q ss_pred -----hhHHHHHHHHHHhhccccchh-hHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 126 -----VMATLCFFRFWLGFGIGGDYP-LSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSA 189 (540)
Q Consensus 126 -----~~~~l~~~r~l~G~~~g~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 189 (540)
..|...+.-+...+-.....+ .-..++.|.++.+|-.|..+++..+.++|.++++.+..++.+.
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 013333444455554444554 7788999999999999999999999999999999888887653
No 233
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.85 E-value=6e-09 Score=95.46 Aligned_cols=138 Identities=21% Similarity=0.178 Sum_probs=115.0
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......+.+++.+++.|.+.||+|+|..+++|++++....+++++... ++..++.=..-+.+.........+
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s--------y~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS--------YPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch--------hHHHHHHHHHhhhhHHHHHhhhHH
Confidence 556667788888999999999999999999999999999999888663 445555555555666666677888
Q ss_pred eecccCchhh-hhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 428 VPAEIFPARL-RSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
++++.+|.+. |++++|+.-.+-.+|-.+||.+.|.++| ..|++.+|+++++++++...+.+++-+.
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe-------------~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE-------------FAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh-------------hcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999765 6999999999999999999999999995 5678899999999999988888755443
No 234
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.84 E-value=1.6e-08 Score=103.01 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=115.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
.........++.++|.++.|.++||+|||++++.+.++..++.+..++.. ++....+.-++.+++..+...+
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--------~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--------NYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHhhccchhHH
Confidence 33466677788899999999999999999999999999999987777765 3555666666667777777788
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcc
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (540)
.+.+..|.++++.|+.+..+ ....+.++.+++...+++.. +|+..+++..+..++..++.++.+
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---------------~Wr~~~~~~~~~~~~~~~~~~l~~ 255 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---------------DWRWLFWIISIPSGLFLLLWFLPP 255 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---------------hHHHHHHHHHHHHHHHHHHHHccC
Confidence 89999999999999999999 88889999999999999983 899999988888887777655555
Q ss_pred cCC
Q 046667 505 ESK 507 (540)
Q Consensus 505 ~~~ 507 (540)
|.+
T Consensus 256 Es~ 258 (521)
T KOG0255|consen 256 ESP 258 (521)
T ss_pred cCh
Confidence 654
No 235
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.82 E-value=8e-09 Score=96.49 Aligned_cols=123 Identities=11% Similarity=0.111 Sum_probs=94.4
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhh----cchhHHHHH-HHHHHHHHHHHhhccCCCC--------c---chhh
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK----LGRKKVYGM-TLMLMVICSIASGLSFGNS--------P---KGVM 127 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr----~Grr~~~~~-~~~~~~i~~~~~~~~~~~~--------~---~~~~ 127 (540)
+++....+.+--+..+...+.+|+.|..+|| |||||.++. +.....++.++..++.+.. . .-..
T Consensus 63 Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai 142 (498)
T KOG0637|consen 63 GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAI 142 (498)
T ss_pred CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHH
Confidence 7888888888888888999999999999995 899887665 5555566666766664311 0 0113
Q ss_pred HHHHHHHHHHhhccccchhhHHHHHhhhcCcccchh-HHHHHHHHHHHHHHHHHHHHHHH
Q 046667 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGA-FIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 128 ~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
..++++--+.-++.......+-+++.|...+++|.+ +.+.+....++|..+|..++.+.
T Consensus 143 ~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 143 VLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 345666666677777888999999999998777766 99999999999999999888743
No 236
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.80 E-value=4.7e-08 Score=97.39 Aligned_cols=131 Identities=13% Similarity=0.120 Sum_probs=89.0
Q ss_pred HHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeee
Q 046667 349 TLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVV 428 (540)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (540)
.....++..+..++.|+++|.+|||..++.+.++..++.++.+.... ....+....+.+++ .+...+....
T Consensus 84 ~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~--------~~~~iag~~l~Gvg-aG~~~~~~~~ 154 (599)
T PF06609_consen 84 STAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN--------MNTFIAGMVLYGVG-AGVQELAALA 154 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc--------HHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 33455566677788999999999999999999999999888876552 22233333333332 2233344556
Q ss_pred ecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 429 PAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
++|..|.+.|..+.++.....-....+++.+...+. ...+||+.|++..++..++++..+
T Consensus 155 isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~-------------~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 155 ISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA-------------AHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc-------------cCCCcchHHHHHHHHHHHHHHHHH
Confidence 799999999988777666544444445566555443 245899999988888777766655
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.78 E-value=5.3e-07 Score=86.77 Aligned_cols=162 Identities=17% Similarity=0.226 Sum_probs=122.1
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+.++.+..+.......+..++.+++..+++|+|+|+++.++.++..++.++..+.+. ++.+.+++..++.+++.+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~----~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA----GSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC----cchHHHHHHHHHHHHHhhc
Confidence 556667777888888888888999999999999999999999999999999998873 2268888999999999999
Q ss_pred chhhHHHHHhhhcC-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc-ccCCCCCcch
Q 046667 144 DYPLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIA-STAPQADYLW 215 (540)
Q Consensus 144 ~~~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~gw 215 (540)
..+...++++|..+ .+.-|...+......=+|..++..+.++.....+.. +.. .+......|-
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv---------~~~~~Q~~~al~gI 414 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV---------PNVSAQSASALFGI 414 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---------CCcccCCHHHHHHH
Confidence 99999999998765 233377888888888899999999988888877642 111 1111223455
Q ss_pred HHHHHh-hhHHHHHHHHHHHhCCC
Q 046667 216 RIIVMV-GALPAALTYYWRMKMPE 238 (540)
Q Consensus 216 r~~f~~-~~~~~~~~~~~~~~~~e 238 (540)
+..+.+ .++..++.++...+.|-
T Consensus 415 ~~~~~~~Pa~l~l~~~i~~~~y~L 438 (467)
T COG2211 415 RFLFIILPALLLLLAAIIIFFYKL 438 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 666655 45555555555445543
No 238
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=6.9e-08 Score=90.35 Aligned_cols=119 Identities=15% Similarity=0.088 Sum_probs=88.5
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccc
Q 046667 345 ARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNAT 424 (540)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (540)
.........++.+.|.++.|++.||+|||++....++++.++.++.++... ..........+..+=...+++..+-.|+
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~-~~~~~~~m~~L~~~R~~LGiGIGGDYPl 164 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG-TTSPLGVMMTLCFFRFLLGIGIGGDYPL 164 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC-CCCCcchhhHHHHHHHHhhccccCCCcc
Confidence 344667778899999999999999999999999999999988886665542 2222234445555556677777778899
Q ss_pred eeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHh
Q 046667 425 TFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLA 464 (540)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~ 464 (540)
.-++.+|....+.||+-.+...+.+..|...|..+.-.+.
T Consensus 165 SAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 165 SATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred hHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 9999999999999999888887666665554444443333
No 239
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.76 E-value=5.9e-06 Score=78.29 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHH
Q 046667 70 SAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSA 149 (540)
Q Consensus 70 ~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (540)
.+.+.-+-.+-..+..+.+.++.+|+.-+.=+....+++.++.++.+++++ .+.=+++-++.+++.|.......
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~------v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS------VWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc------hhHHHHHHHHHhhhhhhhHHHHH
Confidence 344555555666777777888899886554455666788889999999988 68888899999999988888877
Q ss_pred HHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
.+.. .+++ ...+-+..+.+.+.++|+..-..+..
T Consensus 135 ~lt~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~ 168 (402)
T PF02487_consen 135 SLTH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT 168 (402)
T ss_pred HHHH-hcCc----cccccccCCcChhhHHHHHHHHHHHH
Confidence 7754 5553 25677778888888888777666654
No 240
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.75 E-value=5.8e-07 Score=81.95 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=122.1
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHHHHHHhhcc
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVICSIASGLS 118 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~ 118 (540)
++.-.-+|.+..|- ++|..+.|++.+...+.....++....+++|. ++|+..+....++.++.+.+.+.
T Consensus 225 Y~~~~WLP~ili~~----------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 225 YIVIGWLPAILIDR----------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred HHHHHHHHHHHHHc----------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 33445677777777 99999999999999999999999999999975 67888888888888888888888
Q ss_pred CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 046667 119 FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAP 197 (540)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~ 197 (540)
+. ...+..-++.|+|.|..++.+..++.+..+. ++-++..++.+....+=..+||.+.|++-+..++
T Consensus 295 P~-------~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs----- 362 (395)
T COG2807 295 PG-------QLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS----- 362 (395)
T ss_pred hh-------hHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC-----
Confidence 76 2223335999999999999999999998864 4456666666666666677889999999876665
Q ss_pred CCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHH
Q 046667 198 AYEDDPIASTAPQADYLWRIIVMVGALPAALTYYW 232 (540)
Q Consensus 198 ~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~ 232 (540)
|+..++..+...+...+.
T Consensus 363 -----------------w~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 363 -----------------WSAPLVLLALATLLMLIF 380 (395)
T ss_pred -----------------hHHHHHHHHHHHHHHHHH
Confidence 999888866666555444
No 241
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.71 E-value=1.8e-07 Score=93.27 Aligned_cols=160 Identities=10% Similarity=0.060 Sum_probs=123.2
Q ss_pred CCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCc----chhhHHHHHHHHHHh
Q 046667 63 GSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSP----KGVMATLCFFRFWLG 138 (540)
Q Consensus 63 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~l~~~r~l~G 138 (540)
.+.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+......+... ....+.++..-++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 4899999999999999999999999999999999999999999999988866542211000 000245556678888
Q ss_pred hccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHH
Q 046667 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRII 218 (540)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~ 218 (540)
++.+........++.+..|++++++..++.....++|..+++.+++.+.+..+.. .+++..++.
T Consensus 363 ~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~----------------~~~~~~~~~ 426 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGIT----------------CDNSNNLWL 426 (468)
T ss_pred HHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------cccccchHH
Confidence 8888899999999999999999999999999999999999999999998877631 222333444
Q ss_pred HHh-hhHHHHHHHHHHHhCCC
Q 046667 219 VMV-GALPAALTYYWRMKMPE 238 (540)
Q Consensus 219 f~~-~~~~~~~~~~~~~~~~e 238 (540)
.++ ..+..++.+...+++|+
T Consensus 427 ~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 427 LILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 333 44444444445557886
No 242
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=8.8e-08 Score=86.90 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhh------cccCC---CCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhh
Q 046667 22 FTAIIVAGMGFFTDAYDLFCISLVTKLLGRIY------YHVDG---AEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLG 92 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~---~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~ 92 (540)
-..++..++++...+|....+..-+-...+.. ++... ..... .+....-- .-+..+.-.-|.++.+++.
T Consensus 328 tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~-s~~~dYrd-llitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPL-SVAKDYRD-LLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCc-cchhHHHH-HHHHHHhhCCchhHHHHHH
Confidence 34566677777777776655555444443322 00000 00011 11111111 1223445677889999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHH
Q 046667 93 DKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (540)
Q Consensus 93 Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~ 172 (540)
||+|||+++..+.+++++..++...+.+. +-.-..+..+|++. .+.+.+.+.|..|.+|.+-|+...|.-....
T Consensus 406 erlGRKkTMal~l~~f~iflfll~~c~~r--n~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRatgvGtcSsma 479 (528)
T KOG0253|consen 406 ERLGRKKTMALSLILFGIFLFLLTTCKTR--NAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRATGVGTCSSMA 479 (528)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHhcCc--chhHHHHHHHHHHH----hchheEEEEecCcccchhhhhcchhhhhhHH
Confidence 99999999999999999998888777652 01113344556554 4446677899999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 046667 173 GFGILAGGIFA 183 (540)
Q Consensus 173 ~~G~~~g~~~~ 183 (540)
-+|.++.|+++
T Consensus 480 RIggI~~p~iA 490 (528)
T KOG0253|consen 480 RIGGIFSPVIA 490 (528)
T ss_pred hhhhhhhhHHH
Confidence 99999999998
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.66 E-value=9.3e-07 Score=72.28 Aligned_cols=116 Identities=17% Similarity=0.177 Sum_probs=96.7
Q ss_pred CChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccc
Q 046667 65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGD 144 (540)
Q Consensus 65 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (540)
+++..--.-.++......+++++.+.+.+++|.|+.++++.+...+-.... +-++ .+.++.+-.+.|++.+..
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~------~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN------SYTLYPASALLGFGAALL 106 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh------HHHHHHHHHHHhhhhHHh
Confidence 343334445566667778888889999999999999999999988655444 3444 589999999999999999
Q ss_pred hhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187 (540)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 187 (540)
+++.-.++.+..++++|++..+++......+.++|.++..++.
T Consensus 107 W~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 107 WTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988877663
No 244
>PRK11462 putative transporter; Provisional
Probab=98.61 E-value=5e-06 Score=82.99 Aligned_cols=119 Identities=20% Similarity=0.156 Sum_probs=84.6
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhH
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLS 148 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (540)
..+.+.+.+.++..++.+++++++||+|+|+.+..+..+..+..++..+.++. ....+++.-++.|++.+...+..
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~l~ 339 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQ----ASITMFVFIFVIGVLHQLVTPIQ 339 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchh----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999998776555554444444333331 02234445566788777777777
Q ss_pred HHHHhhhcC-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 149 ATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 149 ~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
.+++.|..+ .++.|...+......-+|..+++.+++++....+
T Consensus 340 ~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 340 WVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 778887766 3333666677778889999999999999887655
No 245
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.61 E-value=2.6e-07 Score=65.83 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=72.2
Q ss_pred HHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHH
Q 046667 35 DAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIA 114 (540)
Q Consensus 35 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~ 114 (540)
.+..+..++|.+|.+.+|. ++|.++.|++.++.++||.+|.+...++.++..+++.+..+++...+..+.
T Consensus 4 mGigRFayTplLP~M~~~~----------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADG----------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhhHHHHHHhHhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999 999999999999999999999999999999988899999999999999999
Q ss_pred hhccCC
Q 046667 115 SGLSFG 120 (540)
Q Consensus 115 ~~~~~~ 120 (540)
+++.++
T Consensus 74 ma~~~~ 79 (85)
T PF06779_consen 74 MALTHS 79 (85)
T ss_pred HHHHhc
Confidence 999888
No 246
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.61 E-value=5.9e-07 Score=79.80 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=97.2
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 046667 308 LDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFM 387 (540)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~ 387 (540)
.+...|.+..|.|.+-+..++++++... ......++..+| ++.|.+.|++|.+.++.++.+...++.
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~------------l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNT------------LSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3446677888889888888887766332 445555565554 688999999999999999999999888
Q ss_pred HHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 388 FALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
..+......... ..+.+.+.++.+..+.+.............+.+|. +||++.|+.-....+++.+-..+...+.+
T Consensus 81 ~~~~l~~~~~i~-~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 81 GLLWLAVSGRIP-SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHhCccC-ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 877665432211 12333444443433333222223333344578875 69999999999999998888888877763
No 247
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.59 E-value=4.5e-07 Score=86.57 Aligned_cols=183 Identities=13% Similarity=0.042 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh-ccchh
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK-IGRFA 374 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~-~g~r~ 374 (540)
.++.+...-+.--++||+....+..|+.. .+ +. .+.+..+... .........-...+++||++|| +|+|+
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~--~g-Lg~~~~~A~~-----l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLG--DG-LGFDETHATG-----LFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcc--cc-CCcChHhhHH-----HHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 45555566666667888887666655543 22 11 2232222222 2222222223455689999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh--hhhhhhHHHHHHHHHh
Q 046667 375 IQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAASGKLG 452 (540)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 452 (540)
.+..+.+++.++.+++..... .. .....+.......+....=+...+++.|.+|++ .|..+.++.....++|
T Consensus 94 tI~lGail~~iGh~~L~~~~~-----~~-~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG 167 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSV-----SG-PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG 167 (498)
T ss_pred HHHHHHHHHHHHHHHHhcccc-----cc-ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehH
Confidence 999999999999999987640 01 112222222233444444556667888888753 3777888888888999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 453 AIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 453 ~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
+.++|.+.+++. +.+||...|.+.++-+.++.+..+..+++
T Consensus 168 sl~~p~i~~~~~-------------~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 168 SLIAPIITGLLA-------------INYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHH-------------HhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 999999999998 47789999999999998888877765543
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.56 E-value=9.3e-07 Score=87.13 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=106.6
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++.+++.+.++.+.||++..+.+....++.++..++-.... +.+..++.-++.+....+..|....
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--------s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--------SFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHHhcccchHHHH
Confidence 44555667788888999999999955555444443333332222222 3445556666667777777788888
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (540)
++..-+.++.|++-+|+.++...+|+++|+++...+.+..+. ....||++.|++-+++.++..++.+ ++|+.
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~-------~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS-------GGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-------CCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 999999999999999999999999999999999887653222 1356999999999999988887777 66654
Q ss_pred CC
Q 046667 507 KG 508 (540)
Q Consensus 507 ~~ 508 (540)
..
T Consensus 231 P~ 232 (495)
T KOG2533|consen 231 PS 232 (495)
T ss_pred hh
Confidence 33
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.53 E-value=2.2e-05 Score=73.70 Aligned_cols=154 Identities=18% Similarity=0.151 Sum_probs=125.0
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhh-hcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGD-KLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D-r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+++..|...++.....|..++....|++.. |.++|++-.+++....++..+..++... ++.+.+...-++.|++.|
T Consensus 240 gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~---~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 240 GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL---GSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc---ccchHHHHHHHHHHHhhh
Confidence 899999999999999999999999999887 6788888778887777666554433211 115889999999999999
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
.......+.+.+...+++.|..+|.+.+...++..++..+++.+.+........ ....+|-.+|.+.
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~-------------~~~~aY~~VF~lE 383 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN-------------SPALAYGVVFALE 383 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------------CcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998866542110 1345688899988
Q ss_pred hHHHHHHHHHH
Q 046667 223 ALPAALTYYWR 233 (540)
Q Consensus 223 ~~~~~~~~~~~ 233 (540)
++..++++++.
T Consensus 384 a~ll~~a~~ll 394 (403)
T PF03209_consen 384 AVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHH
Confidence 77766655543
No 250
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.49 E-value=1.8e-06 Score=87.69 Aligned_cols=140 Identities=19% Similarity=0.163 Sum_probs=105.7
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++..++.++.|+++|++|||+.++++.+...++.++..... .+..+.+.-++.+++..+...+...
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------SWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhccchhhhhhcchh
Confidence 56666778889999999999999999999999999999998888766 2334444444444444445566778
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESK 507 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (540)
+.+|+.|++.||...+..+....+|..++ .+.+...+. ..++|+..+.+..+.+++..+..+++||+.
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~-----------~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSK-----------VYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhcc-----------CCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 89999999999999999988888777777 444444420 015899888888888887777755777653
No 251
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.49 E-value=5e-06 Score=77.24 Aligned_cols=186 Identities=13% Similarity=0.019 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHH
Q 046667 299 LGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~ 378 (540)
......++..++..-......|.+-+....+..+ +...-.....+..+..+..+++.+|+|+|+.++.
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l 83 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL 83 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH
Confidence 3344444444555555566677766655544433 3335566667778888899999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHH
Q 046667 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAF 458 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 458 (540)
++.++++++.++.-... ...+.......+..+.+..........++..+.|++....-+.+...++.+|++++|.
T Consensus 84 gL~l~avg~~lF~pAa~-----~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~ 158 (422)
T COG0738 84 GLLLYAVGAALFWPAAS-----SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPL 158 (422)
T ss_pred HHHHHHHHHHHHhhhhh-----hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999887753221 1123222222222222222334455667788888888888899999999999999999
Q ss_pred HHHHHhhccccccCC------CCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 459 GFLYLAQSKDKTKTD------AGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 459 i~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
+.+++..+......+ ....+...++.++...+...++..+...
T Consensus 159 ~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 159 LGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 999998731100000 0000122356667777666666555554
No 252
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.46 E-value=9.3e-06 Score=70.60 Aligned_cols=86 Identities=15% Similarity=0.085 Sum_probs=66.3
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+....++|.+.-+.+-...+...+.|-++||-|||+.-+.-++...+++ +.-.++. +-.++++|.+.|++.+.
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpq------YkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQ------YKVLMVGRVLGGIATSL 140 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCc------eEEEeehhhhhhHHHHH
Confidence 6777788888888888888999999999999999997665555554433 2344555 57899999999999888
Q ss_pred chhhHHHH-Hhhhc
Q 046667 144 DYPLSATI-MSEYA 156 (540)
Q Consensus 144 ~~~~~~~~-i~e~~ 156 (540)
.+.+--++ +.|.-
T Consensus 141 LFSaFEsWliaEHn 154 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 88777765 56654
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.40 E-value=3e-06 Score=76.50 Aligned_cols=379 Identities=13% Similarity=0.091 Sum_probs=199.5
Q ss_pred CCChhhhh-HHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 64 SLPPNVSA-AVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 64 ~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+++..+.. -+.=...-.+.+.-++.=.+.|-.--|++++.-.+.......+..+.++ .+.+=+.-++.|...
T Consensus 37 NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s------V~~mQvlE~FyG~~t- 109 (433)
T KOG3810|consen 37 NLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS------VKAMQVLEFFYGPAT- 109 (433)
T ss_pred CccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC------chheeeehhhcChHH-
Confidence 55554443 2222333345555666667889887788888877777777778888888 688888899999874
Q ss_pred cchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
....+-++++-+..+|+++.++.+.-.+..-.|...|..++..+... +..++...-.+.
T Consensus 110 AaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~---------------------~~~sy~~LN~IS 168 (433)
T KOG3810|consen 110 AAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL---------------------ETLSYTTLNYIS 168 (433)
T ss_pred HHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh---------------------cccchhhhchhh
Confidence 45678899999999999999999999999889988888888887642 233455666665
Q ss_pred hHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhh-hhcccCCccchhhHHHhhhhhHHHHHH
Q 046667 223 ALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQE-LDRDKGNGYGLFSKEFLRRHGLHLLGT 301 (540)
Q Consensus 223 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (540)
.....+..++.+++|..++..-.++++.+....+.++... +.+..+ .+......++.++.-.. .+.++.-
T Consensus 169 L~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~------~~~~~~~l~~~~~~l~~~l~~~y~---np~ll~W 239 (433)
T KOG3810|consen 169 LAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNP------QASYMSYLRGAFVLLWRDLQECYS---NPRLLKW 239 (433)
T ss_pred HHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCc------cchhhHHHHHHHHHHHHHHHHHhc---Cchhhhh
Confidence 5555566667777887665421222211111111111100 000000 00000000001111111 1123333
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHH--HH
Q 046667 302 TSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQM--MG 379 (540)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~--~~ 379 (540)
.+-|.....++|-...|...+.++.. |+.... ..+..=.+..+.+.++.+..|.+--++.|..-+. ++
T Consensus 240 SlWwAl~scg~~QV~nY~Q~LW~~~~--~~~~~v--------yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~ 309 (433)
T KOG3810|consen 240 SLWWALASCGYYQVTNYTQILWKEVA--PNPANV--------YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVG 309 (433)
T ss_pred HHHHHHhhchhHHHHHHHHHHHHhhC--CCchhh--------hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHH
Confidence 44555666777777777777766643 222110 1111223334445566677788766666553333 33
Q ss_pred HHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 046667 380 FFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFG 459 (540)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 459 (540)
.+..+.+.+.+.... +.|.....+.++-....... ++...-+++....+.-|...|+..++.-+-..+ +
T Consensus 310 s~~~agllf~m~~t~-------~Iw~~Ya~yvlfr~~y~l~i-tiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---l 378 (433)
T KOG3810|consen 310 SAVQAGLLFIMAQTQ-------HIWVCYAGYVLFRVIYQLTI-TIATFQIARNLSSELFGLVFGINTFVALILQSI---L 378 (433)
T ss_pred HHHhhhhhhhhhccc-------ceehhhhhHHHHHhhHhhhh-hHHHHHHHHhhhhhhheeeeehHHHHHHHHHHh---h
Confidence 333333333332222 22333333333333333322 233333445556677788888876654433332 2
Q ss_pred HHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 460 FLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
.-.+.|..+-+-+... ...-|..-|.+.+++.+++..+...
T Consensus 379 T~iVvd~~g~~L~ir~--Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 379 TLIVVDDRGLGLDIRT--QFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred eEEEEcccccCCCcce--eEEEEeehHHHHHHHHHHHHHHHHH
Confidence 3333332221100000 0112334467778888777665443
No 254
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.39 E-value=2.7e-08 Score=99.67 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=105.4
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......++.++|.++.|++.||+|||+.++.+..+..++.++..+.... .+.....+.-++.+++..+..+....
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHhhhcccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccccc
Confidence 5666778889999999999999999999999988888888777665521 12333334444455555556678889
Q ss_pred eecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccC
Q 046667 428 VPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPES 506 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (540)
++.|..|++.|+...++.+....+|..++..+...+.+ .. +..+|+..+.+.++..++..+..+++||.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~---------~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-YS---------DNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc-cc---------ccccccccccccccccccccccccccccc
Confidence 99999999999999999998888888877766544421 11 23468888877777776666655677775
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.36 E-value=3e-06 Score=81.86 Aligned_cols=156 Identities=10% Similarity=0.002 Sum_probs=101.7
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCcccee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGR-FAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTF 426 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (540)
......++..+++++.++...|.+. |++++.+.+++.++.++...... . ++...++++..=+....+.+.....-
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~-~---~~~~~y~mL~~R~l~Gvg~~n~a~lR 151 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAY-V---PNGVKYLMLVARILTGVGVGNFAVLR 151 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHh-c---ccchHHHHHHHHHHcCcCcccHHHHH
Confidence 4555778888899999999999886 88889999998888887743331 1 12133333333333333334455667
Q ss_pred eeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccC-CCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcc
Q 046667 427 VVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKT-DAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVP 504 (540)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 504 (540)
.|+++..-.+.|.++++..+...-+|.++||.+...+.-.....-. .++ ..-.-|..+-++++++.++.+++.+ +++
T Consensus 152 ~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~-~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 152 AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG-LIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc-ceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 8888877777888899888887788888888776655432211100 010 1222456677888888888887777 666
Q ss_pred cCCC
Q 046667 505 ESKG 508 (540)
Q Consensus 505 ~~~~ 508 (540)
|..+
T Consensus 231 E~~~ 234 (488)
T KOG2325|consen 231 EVYR 234 (488)
T ss_pred eccc
Confidence 6543
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.30 E-value=5.3e-05 Score=69.56 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhh-----hc
Q 046667 21 HFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGD-----KL 95 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~D-----r~ 95 (540)
...-+..+.+.+..++.-.+..+ .+|.+.+.- +.|.++.+...-++. - ..--++|.++.| |+
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak----------~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~ 95 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK----------GVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRF 95 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC----------Ccchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhh
Confidence 34455666677888888888887 888887655 777777765433221 1 233578888999 99
Q ss_pred chhHHHHH-HHHHHHHHHHHhhccCCCC-----cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHH
Q 046667 96 GRKKVYGM-TLMLMVICSIASGLSFGNS-----PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 169 (540)
Q Consensus 96 Grr~~~~~-~~~~~~i~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~ 169 (540)
||||.-++ +..+.+..+.+.+...+.. .-+....+...-++.-+.++.--.+.-.+.-....+++-|-+.....
T Consensus 96 GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~ 175 (510)
T KOG3574|consen 96 GRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQS 175 (510)
T ss_pred ccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHH
Confidence 99985332 4444444333333322110 00112223333344445555555666667777778888888877766
Q ss_pred HHHHHHHHHHHHH
Q 046667 170 AMQGFGILAGGIF 182 (540)
Q Consensus 170 ~~~~~G~~~g~~~ 182 (540)
.+.+.|..++..+
T Consensus 176 Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 176 VGQTAGYFLGNVV 188 (510)
T ss_pred HHHhhhHHhhcce
Confidence 6666666666544
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.27 E-value=2.5e-06 Score=81.77 Aligned_cols=140 Identities=14% Similarity=0.028 Sum_probs=121.1
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
+-.+...|.....-..|-.+.-++.+++..|+|+-+++..++...++=.+......| .|+.+...+++|+..+.
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n------~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN------PWMVLPIEILQGITHAL 475 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC------chheeeHHHHHHHHHHH
Confidence 566777787777778888888899999999999999999999999999999999999 69999999999999999
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhh
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVG 222 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~ 222 (540)
.+.++.+|++...||+-|..+.++.+ ...++|-.+|.++++.+... +|=|..|.+.
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~-----------------------fg~~ttf~~~ 532 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER-----------------------FGARTTFRIF 532 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-----------------------ehhHHHHHHH
Confidence 99999999999999999999999875 55689999999999998544 4468888877
Q ss_pred hHHHHHHHHH
Q 046667 223 ALPAALTYYW 232 (540)
Q Consensus 223 ~~~~~~~~~~ 232 (540)
++.+++.++.
T Consensus 533 giAcl~~l~~ 542 (618)
T KOG3762|consen 533 GIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHH
Confidence 7766654443
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.18 E-value=1.2e-05 Score=56.96 Aligned_cols=68 Identities=21% Similarity=0.301 Sum_probs=54.1
Q ss_pred HHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHH
Q 046667 31 GFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLM 108 (540)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~ 108 (540)
.+++.....+.+-|.+|...++. +++..++|.+.++..+...++.+++|.++||+++++.++....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~----------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQL----------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34444545555566666666666 899999999999999999999999999999999988877765543
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.18 E-value=0.00067 Score=66.51 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=39.4
Q ss_pred hhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 046667 125 GVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALI 185 (540)
Q Consensus 125 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 185 (540)
..++..++.-++.|++.+........+.+ .+|++ .+..+..+.+++++++.++-..
T Consensus 104 ~~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii 159 (437)
T TIGR00939 104 GFFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMIL 159 (437)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHH
Confidence 34777788888999998888888888777 55543 4555666677777666665443
No 260
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=1.5e-05 Score=78.04 Aligned_cols=136 Identities=20% Similarity=0.208 Sum_probs=102.4
Q ss_pred HHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecc
Q 046667 352 ALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAE 431 (540)
Q Consensus 352 ~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (540)
.++..++.+...|.++||+|||..+....+...+....+.+.. ++......+ ............+++++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---------~~~~~~~~l--~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---------YWFFLLLGL--SGGFSAIFSVGFAYVAD 139 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---------HHHhhhccc--ccchhhhhhhhhhheee
Confidence 3455566777899999999999998887776666655555432 222222222 22233345677889999
Q ss_pred cCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCCCCC
Q 046667 432 IFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESKGKS 510 (540)
Q Consensus 432 ~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 510 (540)
....+.|....|+.+.....+..++|.+.+.+.+ ..|+...|.+..+..++..+... ++||+...+
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-------------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-------------FLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-------------hcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 9999999999999999999999999999999984 56788889998888888888777 788876544
Q ss_pred h
Q 046667 511 L 511 (540)
Q Consensus 511 ~ 511 (540)
.
T Consensus 207 ~ 207 (463)
T KOG2816|consen 207 E 207 (463)
T ss_pred c
Confidence 3
No 261
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.06 E-value=0.00048 Score=65.01 Aligned_cols=175 Identities=11% Similarity=0.070 Sum_probs=86.3
Q ss_pred HHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHh
Q 046667 36 AYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIAS 115 (540)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~ 115 (540)
-+....+..+.++..+++... +.+..-....+....+...+....--.+.-|. |+++.....+...+..+.+
T Consensus 31 LlpWN~fiTa~~y~~~~~~~~-------~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l 102 (406)
T KOG1479|consen 31 LLPWNMFITASDYYYYRFPGY-------HNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTL 102 (406)
T ss_pred ccchHhhhccHHHHHhhcCCC-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 344556666777777666211 11333334444444444555555555556562 2222211111111112222
Q ss_pred hcc---CCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 046667 116 GLS---FGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNA 192 (540)
Q Consensus 116 ~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~ 192 (540)
.++ ...+....+...++.-.+.+++.|......+...++. |+|. ..-+.++.++++.+..++.........+
T Consensus 103 ~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y----tqavm~G~a~aG~l~Sl~~i~tka~~~~ 177 (406)
T KOG1479|consen 103 DLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY----TQAVMSGQALAGTLTSLLRILTKAAFSD 177 (406)
T ss_pred HHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH----HHHHHhcchhHhHHHHHHHHHHHHhcCC
Confidence 222 2222334467777788888888888777777766654 4443 2333345555555555444333322221
Q ss_pred ccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChh
Q 046667 193 AFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETAR 241 (540)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~ 241 (540)
...+=...|.+..+..+++++....+|..|-
T Consensus 178 ------------------~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 178 ------------------SRTSALIYFITSTVILLLCFVLYLVLPKLPF 208 (406)
T ss_pred ------------------CCceeehhHHHHHHHHHHHHHHHHHhhcchH
Confidence 1122334555666666666666666777664
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.05 E-value=0.00022 Score=68.45 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.7
Q ss_pred cceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 423 ATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
....+.-+.+..|..-|+.+.+.|+..++|+-.-..+.-++.|...
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 3445666788889999999999999999999888777777877543
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.02 E-value=0.0041 Score=62.96 Aligned_cols=161 Identities=16% Similarity=0.089 Sum_probs=117.2
Q ss_pred hHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHHHHHHhhcc
Q 046667 40 FCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVICSIASGLS 118 (540)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~ 118 (540)
+.....+..+..++ +.+...+.-..+.+.-...+..+.+++++|-| ||-+++.++.++..++..+..++
T Consensus 55 g~~~nlv~ylt~~~----------~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~ 124 (571)
T KOG1237|consen 55 GLVSNLVTYLTLEL----------HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLS 124 (571)
T ss_pred cchhHHHHHHHHHh----------ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466777888888 77777888888888888888889999999986 99999999988888775443322
Q ss_pred CCC-----------------C--cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC---ccc---chhHHHHHHHHHH
Q 046667 119 FGN-----------------S--PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN---KKT---RGAFIAAVFAMQG 173 (540)
Q Consensus 119 ~~~-----------------~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~---~~~---r~~~~~~~~~~~~ 173 (540)
... . .......+....-+..+|.|+.-+...++-+|-++ +++ +...+.++....+
T Consensus 125 a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~ 204 (571)
T KOG1237|consen 125 AMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQN 204 (571)
T ss_pred HHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHH
Confidence 110 0 00113466777788888999999999999999998 322 2356777788888
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHH
Q 046667 174 FGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWR 233 (540)
Q Consensus 174 ~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 233 (540)
+|..++..+..++ .+..+|.+-|.+..+..+++++++
T Consensus 205 ~g~l~a~t~~vyi-----------------------q~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 205 GGALLAQTVLVYI-----------------------QDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHHHHHHHHhh-----------------------hhcccceeeccHHHHHHHHHHHHH
Confidence 8888887766655 335679999988777666555443
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.00 E-value=0.021 Score=56.63 Aligned_cols=160 Identities=11% Similarity=0.080 Sum_probs=96.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHH-HHHHhhhhhhhhhhhcc
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFC-GTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~Dr~G 96 (540)
.+..+..++.+++..|+..++.+. +..+.+.+--. ......+..+-....+ ...+...+..++++|++
T Consensus 19 ~~~E~~k~~~l~~m~f~i~f~y~~----lR~~KD~lvvt-------~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s 87 (491)
T PF03219_consen 19 HRSELKKFLPLALMFFFILFNYTI----LRDLKDTLVVT-------AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLS 87 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH----HHHhcCeEEEe-------cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 455566666666666666665543 33333333100 1344556666554444 44566778899999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcc--CCCC---cch------------h--------hHHHHHHHHHHhhccccchh-hHHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLS--FGNS---PKG------------V--------MATLCFFRFWLGFGIGGDYP-LSAT 150 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~--~~~~---~~~------------~--------~~~l~~~r~l~G~~~g~~~~-~~~~ 150 (540)
|++++-+....+...-.++++. |+.+ +.. . .|...+.-++.-+-.....+ .-..
T Consensus 88 ~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~ 167 (491)
T PF03219_consen 88 REKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWG 167 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998877666665544444432 1100 000 0 11122222222232223233 4577
Q ss_pred HHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 151 IMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 151 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
+..|.++.+|-.|..+++..+.++|.++++.+...+.+
T Consensus 168 fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999888888876
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.92 E-value=0.00034 Score=72.03 Aligned_cols=140 Identities=11% Similarity=0.001 Sum_probs=91.2
Q ss_pred hhhHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCch
Q 046667 357 VPGYWFTVAFIDK-IGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435 (540)
Q Consensus 357 ~~~~~~~~~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (540)
-+..+++|+++|+ +|+++.+.++.++..++..++.+................+...++..+..+.-|...+...|.+++
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 3445578889997 699999999999988888777664311000011111122222333344444556666777777764
Q ss_pred h---hhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 046667 436 R---LRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFL 502 (540)
Q Consensus 436 ~---~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (540)
+ .+.....+.....++|+.+++.+.+++.+..+. +....+|..+|.+.+++++++.+....
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~------fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC------FGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3 467788888888999999999999998753210 012347888998888888888776653
No 266
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.89 E-value=0.00094 Score=61.91 Aligned_cols=155 Identities=13% Similarity=0.031 Sum_probs=89.2
Q ss_pred HHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 046667 321 DIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK 400 (540)
Q Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (540)
..+++.|+...+. +. ..........+...+.|.+.||+|||+.-+..+++..++++.--...
T Consensus 59 ~LY~~yg~~~~qI-----------a~-Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~------ 120 (354)
T PF05631_consen 59 ALYESYGFSEHQI-----------AI-LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSN------ 120 (354)
T ss_pred HHHHHcCCCHHHH-----------HH-HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccc------
Confidence 4445666665542 22 45555556666677889999999999988887777777765433221
Q ss_pred CchhHHHHHHHHHHHHhhcCCccceee-eecc----cCchhhhhhhhHHHHH-HHHHhHHHHHHHHHHHhhccccccCCC
Q 046667 401 SNRLGFVIIYSLTFFFANFGPNATTFV-VPAE----IFPARLRSTCHGISAA-SGKLGAIVGAFGFLYLAQSKDKTKTDA 474 (540)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~p~~~~~~~~g~~~~-~~~~g~~i~~~i~~~~~~~~~~~~~~~ 474 (540)
...+++.-+.++.......+..=+ ++.| -+|++..+...+...+ .+.+-++++..+...+.+..+
T Consensus 121 ---~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~------ 191 (354)
T PF05631_consen 121 ---YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG------ 191 (354)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC------
Confidence 223333333333322222111111 2233 3566666666666653 344556666666666665332
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHH-hcccCC
Q 046667 475 GYPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESK 507 (540)
Q Consensus 475 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (540)
.|...+|....++.+++.++.. ..+|..
T Consensus 192 -----~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 192 -----FGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 3557788888888887777766 344443
No 267
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.87 E-value=0.00021 Score=67.68 Aligned_cols=159 Identities=15% Similarity=0.047 Sum_probs=94.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccce
Q 046667 346 RAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATT 425 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (540)
.....+..+..++..+.+-|+.||+|-|....++....+++..+=.........+.......................+.
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP 161 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP 161 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc
Confidence 33556666667777788999999999999999999998888877655442111111111122222222222222121222
Q ss_pred eeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhh--HHHHHHHHHHHHHHHHHhc
Q 046667 426 FVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKN--SLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~ 503 (540)
.-+..--+|+++|+++..+..+.+.+|.+++.++.+.+..+... .+...|.. .|+...+++.+.+++..+.
T Consensus 162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~-------~~~~~~~~~~~f~~~~~l~~l~l~l~~~~ 234 (480)
T KOG2563|consen 162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD-------SEDNSWLFFTLFLGVECLAALLLALVLFV 234 (480)
T ss_pred cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCC-------cchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22334458999999999999999999999999998888864421 12233333 3454555544444333344
Q ss_pred ccCCCCCh
Q 046667 504 PESKGKSL 511 (540)
Q Consensus 504 ~~~~~~~~ 511 (540)
++.+.+..
T Consensus 235 ~~~~P~tP 242 (480)
T KOG2563|consen 235 FTKKPPTP 242 (480)
T ss_pred cCCCCCCC
Confidence 44444433
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.82 E-value=0.00023 Score=69.05 Aligned_cols=114 Identities=13% Similarity=0.123 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCC---cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcc---cchhHHHHHHHHH
Q 046667 99 KVYGMTLMLMVICSIASGLSFGNS---PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQ 172 (540)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~ 172 (540)
|+++++.++..+|.++..++.... .....+.+.++-++.++|.|+.-|....+.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577888899999988844432211 1112367889999999999999999999999999865 4667788899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHh
Q 046667 173 GFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMK 235 (540)
Q Consensus 173 ~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 235 (540)
++|..++..+.+++- ++.||.+.|.+.++..+++++..+.
T Consensus 82 n~G~~~~~~~~~~i~-----------------------~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQ-----------------------QNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHH-----------------------HCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhc-----------------------cccchhhhhhHHHHHHHHHHHHHHh
Confidence 999999999888884 3567999999988877776665443
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.49 E-value=1.8e-05 Score=79.64 Aligned_cols=161 Identities=14% Similarity=0.038 Sum_probs=1.9
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC---------------------------
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK--------------------------- 400 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 400 (540)
.....-++.++..++..++.+|..|-+.+-.+.++++++.+++.+++......
T Consensus 43 i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~ 122 (539)
T PF03137_consen 43 ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQA 122 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccc
Confidence 66666677777777777888887777788888889999888888765421100
Q ss_pred ---------------CchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 401 ---------------SNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 401 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
...+...++..++.+.+.....++..+|+-|.++++..+...|+..+...+|-++|-.+.+....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 123 SSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp -----------------------------SSS------------------------------------------------
T ss_pred cCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHh
Confidence 01223344444555566666788889999999999999999999999998888888777776665
Q ss_pred cccc----c----cCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHhcccCCC
Q 046667 466 SKDK----T----KTDAGYPPGIG-VKNSLIVLGVVNLLGLLFTFLVPESKG 508 (540)
Q Consensus 466 ~~~~----~----~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (540)
..-+ + ...+.-+...| |...|++.+.+.++..+..+..|++-.
T Consensus 203 ~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 203 IYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ----------------------------------------------------
T ss_pred ceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 4221 1 11122223344 667788888888877777776665443
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.31 E-value=0.0057 Score=62.52 Aligned_cols=161 Identities=14% Similarity=0.035 Sum_probs=112.8
Q ss_pred HHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc------------------------------
Q 046667 350 LIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTH------------------------------ 399 (540)
Q Consensus 350 ~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 399 (540)
...-++..+...+..+...|..|-+.+-++.++++++.++..+++.....
T Consensus 139 s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 218 (735)
T KOG3626|consen 139 SSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNL 218 (735)
T ss_pred eecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccc
Confidence 33344455555566677778888888888999999998888876421100
Q ss_pred ------------CC--chhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 400 ------------KS--NRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 400 ------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
.. ..+.++++..++.+.+....+++..+|+-|...++......|+..++..+|=++|-++.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 219 CRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLK 298 (735)
T ss_pred cCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 00 1334555556667777777888999999999999999999999999999988888888888776
Q ss_pred ccccc-cCC----CCCCCCcc-hhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 046667 466 SKDKT-KTD----AGYPPGIG-VKNSLIVLGVVNLLGLLFTFLVPESKGKS 510 (540)
Q Consensus 466 ~~~~~-~~~----~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (540)
...+- ... +.-+...| |+..|++++.+.++..+.+++.|+..++.
T Consensus 299 lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 299 LYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred eeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 54432 111 11122233 66778899999999998888888766554
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.25 E-value=0.0042 Score=54.74 Aligned_cols=115 Identities=11% Similarity=0.090 Sum_probs=56.7
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCc--hhHHHHHHHHHHHHhhcCCccce
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSN--RLGFVIIYSLTFFFANFGPNATT 425 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 425 (540)
..+....+..+|.+..|...+.-=+|+..+...+.+++.++++.....+....++ ......++.++.+.+..+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 4445555555666666666655334444443333333333222222211111112 33445555566666667777766
Q ss_pred eeeeccc--CchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 046667 426 FVVPAEI--FPARLRSTCHGISAASGKLGAIVGAFGFLY 462 (540)
Q Consensus 426 ~~~~~~~--~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~ 462 (540)
..+..|. ..|+.-|.-.|+.-.++++.-.+.-.+...
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~ 264 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSV 264 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555554 234455666666666666655555444433
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.19 E-value=0.019 Score=54.98 Aligned_cols=128 Identities=9% Similarity=0.055 Sum_probs=87.3
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhh
Q 046667 361 WFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRST 440 (540)
Q Consensus 361 ~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 440 (540)
+....+.|.++.|.+++++.+...+...++.+.. ....+-+.-++.+..... -...++++-...|+++--+
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~ 129 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQK 129 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHH
Confidence 4567789999999999998888777777766654 233344444444433332 2344456666677887788
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 046667 441 CHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKG 508 (540)
Q Consensus 441 ~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (540)
+.+...+..-+|..++..++-.+... +...+....++..+...++.++.+++|..++
T Consensus 130 vts~~raa~l~g~~~s~~lgQllvs~-----------~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 130 VTSYTRAATLVGRFISSLLGQLLVSF-----------GGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 88888888888888888877766642 2346777767766666777777778876543
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.17 E-value=0.0047 Score=61.04 Aligned_cols=165 Identities=11% Similarity=0.063 Sum_probs=116.0
Q ss_pred CCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCc----chhhHHHHHHHHHH
Q 046667 62 PGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSP----KGVMATLCFFRFWL 137 (540)
Q Consensus 62 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~l~~~r~l~ 137 (540)
..+.++...|.+..+..++..++..+.....-+..-|+++.++.++.++..+.-...-.... ....+..+.--++.
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~ 328 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILE 328 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHH
Confidence 44689999999999999999999999988888888899998888887776665332210000 00012233344555
Q ss_pred hhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHH
Q 046667 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRI 217 (540)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~ 217 (540)
.+..+..+-....+++|..|+..-|...++.....++|..++..++..+.+.++.... +..+-.+
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~---------------~f~~l~~ 393 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRD---------------DFSNLWL 393 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc---------------cccchHH
Confidence 6666667788889999999999999999999999999999999999999888773110 0111234
Q ss_pred HHHhhhHHHHHHHHHHHhCCCChh
Q 046667 218 IVMVGALPAALTYYWRMKMPETAR 241 (540)
Q Consensus 218 ~f~~~~~~~~~~~~~~~~~~esp~ 241 (540)
..++..+..++.+.+..++|+..+
T Consensus 394 lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 394 LILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCch
Confidence 444455555555555666776543
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.15 E-value=0.0026 Score=45.17 Aligned_cols=62 Identities=16% Similarity=0.080 Sum_probs=46.6
Q ss_pred HHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHH
Q 046667 308 LDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFF 381 (540)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~ 381 (540)
.........-|.+.++++.|.++.+.+. ...+..+..+++.++.|+++||.++++.......
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGi------------l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGI------------LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3344555666888888888888777443 6666777888899999999999999887766543
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.14 E-value=0.036 Score=55.94 Aligned_cols=123 Identities=20% Similarity=0.188 Sum_probs=75.0
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHH-HHHHHH-HHHHHhhccCCCCcchhhHHHHHHHHHHhhcc
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGM-TLMLMV-ICSIASGLSFGNSPKGVMATLCFFRFWLGFGI 141 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (540)
+.+....+.+.+++.+|.++|+.+++++.++.-|+....- ...+.+ ++..+....... .......+...-++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF-QGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999988754333322111 111111 111111111110 0000122344456678888
Q ss_pred ccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
|+..|....+..+... ++-++..|-......+|.++|.++.+++.-
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 8888888777765432 234567788888899999999999887753
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.13 E-value=0.3 Score=47.59 Aligned_cols=160 Identities=11% Similarity=0.054 Sum_probs=101.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHH-HHHHhhhhhhhhhhhcc
Q 046667 18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFC-GTLAGQLFFGWLGDKLG 96 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~Dr~G 96 (540)
+++.+..+...++..++..++.. .+-.+.+.+--. ...+..+.++-+...+ +..+..++.+++.+++.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~-------~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt 90 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYN----LLRSLKDSLVVT-------RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILT 90 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhheEee-------cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcC
Confidence 33455555556666665555553 334444444100 2445677888888888 77888999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCC-----Cc------------c-h---hh-----HHHHHHHHHHhhccccchh-hHH
Q 046667 97 RKKVYGMTLMLMVICSIASGLSFGN-----SP------------K-G---VM-----ATLCFFRFWLGFGIGGDYP-LSA 149 (540)
Q Consensus 97 rr~~~~~~~~~~~i~~~~~~~~~~~-----~~------------~-~---~~-----~~l~~~r~l~G~~~g~~~~-~~~ 149 (540)
|.+++-+.+..+...-+++++.--+ ++ + + .+ |...+.-.+.=+-...... .-.
T Consensus 91 ~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw 170 (509)
T COG3202 91 REKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888777776666666654210 00 0 0 00 2222222222222222222 445
Q ss_pred HHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 150 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
....|.+..+|-.|..++++.+.+++..++..+..++..
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677889988898999999999999999998888888764
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.12 E-value=0.014 Score=55.82 Aligned_cols=116 Identities=15% Similarity=0.167 Sum_probs=83.5
Q ss_pred CChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHH---HHHhhccCCCCcchhhHHHHHHHHHHhhcc
Q 046667 65 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVIC---SIASGLSFGNSPKGVMATLCFFRFWLGFGI 141 (540)
Q Consensus 65 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (540)
-...+.-+...+|.+|-.++.--...+ |+-+-+++.+-..+..+. ....-+.++ .|.+++.-+..|+..
T Consensus 278 ~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fips------i~ivf~lif~eGLlG 349 (402)
T PF02487_consen 278 SPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPS------IWIVFVLIFYEGLLG 349 (402)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhH------HHHHHHHHHHHHHhh
Confidence 335677888888888877775433222 342222222222222222 222334455 688888999999999
Q ss_pred ccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
|..+..+...+.|-.|+++|...++....+.++|..++.+++.++-.
T Consensus 350 Ga~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 350 GASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887743
No 278
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.10 E-value=0.023 Score=46.65 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=72.1
Q ss_pred hhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCc
Q 046667 355 STVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFP 434 (540)
Q Consensus 355 ~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 434 (540)
...+.+++.+.+.+++|.|+.++++.+...+-........ +..++...++.+++....+...-.++.+...
T Consensus 49 ~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~---------~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 49 SFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN---------SYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 3455567788899999999999998877765554443221 3344444444445444444555577888888
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 435 ARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 435 ~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
++.+++..++...+.+.+.++|..+.-.+.+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988888877665553
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.06 E-value=0.031 Score=55.20 Aligned_cols=108 Identities=7% Similarity=0.031 Sum_probs=70.7
Q ss_pred hhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC--C----------------------chhHHHHHHHHH
Q 046667 358 PGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHK--S----------------------NRLGFVIIYSLT 413 (540)
Q Consensus 358 ~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------------~~~~~~~~~~~~ 413 (540)
+..++.+++++|++|++.+..........+.++.+........ + ..|.....+...
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~ 138 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMA 138 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHH
Confidence 3356789999999999987766555555555444432100000 0 122222222222
Q ss_pred HHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
-........-+.|.+++|++..++..+-.++....+++|.++++.+..++.+
T Consensus 139 elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 139 ELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222332323788999999999999999999999999999999999888774
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.97 E-value=0.11 Score=50.85 Aligned_cols=115 Identities=20% Similarity=0.158 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhh---hcchhHHHHHHHHHHHHHHHHhhccCCCCc------------chhhHHHHHHHH
Q 046667 71 AAVNGVAFCGTLAGQLFFGWLGD---KLGRKKVYGMTLMLMVICSIASGLSFGNSP------------KGVMATLCFFRF 135 (540)
Q Consensus 71 g~~~s~~~~~~~i~~~~~g~l~D---r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~l~~~r~ 135 (540)
+...-...+|..++..+.+.+.+ ++||++.+.++..+..++.++.-....... .++....++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33333444455556666667765 589999999998888888777665433211 012567788889
Q ss_pred HHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 136 WLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
+.|++.+......+.++.+.+ +++|..+.++...-..++..++.......
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999 57788888888888888877766554443
No 281
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.95 E-value=0.13 Score=47.06 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=69.7
Q ss_pred HHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC
Q 046667 78 FCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157 (540)
Q Consensus 78 ~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~ 157 (540)
.+..+.++++.+.+.+++|-|+++.++.......- ..-+-+. +..++-.-...|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr------~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPR------YETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-Hhhcchh------HHhhccHHHhhccccccccccCcceecHHHH
Confidence 34455666666689999999999988877765432 1222233 7889999999999999998877777766543
Q ss_pred --cccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 158 --KKTR---------GAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 158 --~~~r---------~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
.++| .+..+.+.+....+...|..++..+..
T Consensus 141 ~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 141 NYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred HHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233 455666666666666666555554443
No 282
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.62 E-value=0.00038 Score=65.32 Aligned_cols=111 Identities=11% Similarity=-0.013 Sum_probs=2.7
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhcccc-----cc-cCCchhHHHHHHHHHHHHhhcC
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKI-GRFAIQMMGFFFMTVFMFALAIPYDH-----WT-HKSNRLGFVIIYSLTFFFANFG 420 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~ 420 (540)
......++..+|+.+..+..-+. .+|++. +..+.=.+..-++...... .+ .-++.+ +.++..+..++..+-
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~-~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDA-WFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchH-HHHHHHHHHHHccch
Confidence 56677888999998877643221 233333 2222211111111111100 00 001122 223333344444444
Q ss_pred CccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
..++...+.++..+++.|..+-.+...+-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677788888888888887777777777766666544
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.33 E-value=0.22 Score=48.77 Aligned_cols=152 Identities=15% Similarity=0.123 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMT 104 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~ 104 (540)
++...++..+-++....++.........- |+++..+|..-+...+....+.+...++.+|+|..|.=+++
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~----------G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~ 329 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQ----------GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWS 329 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHH
Confidence 44444554444444333344444444333 89999999999999999999999999999999998887777
Q ss_pred HHHHHHHHHHh---hccCCCC-cchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHH
Q 046667 105 LMLMVICSIAS---GLSFGNS-PKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (540)
Q Consensus 105 ~~~~~i~~~~~---~~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 180 (540)
+........++ .+.+... +..+...++.+-.+.=+|.=+.-....-++-|..|+++||...|...+..++--++..
T Consensus 330 l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 330 LWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 66544332222 2233211 1112344444444444555566778888999999999999999999999988888887
Q ss_pred HHHHHH
Q 046667 181 IFALIV 186 (540)
Q Consensus 181 ~~~~~l 186 (540)
.++..+
T Consensus 410 ~~~ii~ 415 (432)
T PF06963_consen 410 VLTIIF 415 (432)
T ss_pred HHHhcc
Confidence 776554
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.78 E-value=0.26 Score=45.89 Aligned_cols=129 Identities=17% Similarity=0.219 Sum_probs=78.2
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
......+...++.++.|.+.||.|||+.+..+......+.....+... .............+.......+...+
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 444444555556689999999999997777666543333333333221 11222222222233333344567778
Q ss_pred eecccCch-hhhhhhhHHHHH-HHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHH
Q 046667 428 VPAEIFPA-RLRSTCHGISAA-SGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVN 493 (540)
Q Consensus 428 ~~~~~~p~-~~~~~~~g~~~~-~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (540)
+..|..|+ +.|+...+.... ...++..+++.+.+.+... ...+|+..+.......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-----------LLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhcchHHHHHHHHHHH
Confidence 88899887 678888888888 5778888888777777653 1346666555444444
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.49 E-value=0.068 Score=48.30 Aligned_cols=106 Identities=15% Similarity=0.050 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhc--chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhh
Q 046667 70 SAAVNGVAFCGTLAGQLFFGWLGDKL--GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPL 147 (540)
Q Consensus 70 ~g~~~s~~~~~~~i~~~~~g~l~Dr~--Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (540)
.|.+.-+-.+-..+..+......||+ |.|.. +..++.+.+.++.+++++ .++-+++-.+..++.|.....
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~--~~v~~sa~s~~lVafs~s------~~~sL~GV~~aSissGlGEiT 135 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIA--LVVLLSALSFFLVAFSNS------VPMSLLGVVFASISSGLGEIT 135 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHH--HHHHHHhcceEEEEeccc------hhHHHhhhhhhhhcCCcceee
Confidence 44555555556666667777788875 55543 455666778888999988 688788888888887766544
Q ss_pred HHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 148 SATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSS 188 (540)
Q Consensus 148 ~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 188 (540)
-.++-+. +++ ...+-+..+.+.+.++|..--..+.+
T Consensus 136 FL~lss~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 136 FLALSSR-YPS----IVIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred hhhhhcc-CCC----ceeccccCCCCcchhhhhhHHHHHhh
Confidence 4444333 332 23444555555555566554444443
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.31 E-value=0.064 Score=52.09 Aligned_cols=117 Identities=13% Similarity=0.047 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHHHhccccccc-CCchhHHHHHHHHHHHHhhcCCccceeeeecccCchh---hhhhhhHHHHHHH
Q 046667 374 AIQMMGFFFMTVFMFALAIPYDHWTH-KSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAASG 449 (540)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 449 (540)
+++.++.++..++.+++.+....... .+.......+.......+..+.=|...++..|.++++ .|...........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45677777888887775443321111 1111223333333344555556667777788888754 5677777888889
Q ss_pred HHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 046667 450 KLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 450 ~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
++|..++..+.+++.+ ..||...|.+.++..+++.+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~-------------~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ-------------NYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHH-------------CS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhcc-------------ccchhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999984 6799999999998888887766643
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.89 E-value=0.52 Score=47.03 Aligned_cols=109 Identities=10% Similarity=0.083 Sum_probs=69.3
Q ss_pred hhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc---ccccCC---------------------chhHHHHHHHH
Q 046667 357 VPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYD---HWTHKS---------------------NRLGFVIIYSL 412 (540)
Q Consensus 357 ~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~~~ 412 (540)
++...+..++++++++.++.-...........++++... ...+.+ ..|.....+..
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 444557789999999998776555444444444433211 000110 12222222222
Q ss_pred HHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 413 TFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
.-..+.....-+.|.++.|+.+.++..+..++.....++|.++++.+..++.+
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333333578999999999999999999999999999999999888876
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.87 E-value=0.051 Score=52.12 Aligned_cols=149 Identities=12% Similarity=0.069 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhh----ccchhHH
Q 046667 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDK----IGRFAIQ 376 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~----~g~r~~~ 376 (540)
.....+..-+++-....|.+.+.++.|......+. .....-+.+++-.++.|..+|| +||||..
T Consensus 37 v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~------------iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf 104 (498)
T KOG0637|consen 37 VASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSI------------IWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPF 104 (498)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHcCCCcccccc------------cccccccccceecccccccccccccccccccch
Confidence 33333444455555667778888888876665322 4444445556667788899996 7888887
Q ss_pred HHHHH-HHHHHHHHHHhccccc----ccCC--chhHHHHHHHHHHHH---hhcCCccceeeeecccCchhhhhh-hhHHH
Q 046667 377 MMGFF-FMTVFMFALAIPYDHW----THKS--NRLGFVIIYSLTFFF---ANFGPNATTFVVPAEIFPARLRST-CHGIS 445 (540)
Q Consensus 377 ~~~~~-~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~ 445 (540)
+.... ...+.++++....... .... .....+.+..+.... ..-......-++..|+..++.+.+ +++..
T Consensus 105 I~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f 184 (498)
T KOG0637|consen 105 ILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVF 184 (498)
T ss_pred HHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhH
Confidence 76544 4445555554433211 0011 111222222222222 221223345577888887777777 99999
Q ss_pred HHHHHHhHHHHHHHHH
Q 046667 446 AASGKLGAIVGAFGFL 461 (540)
Q Consensus 446 ~~~~~~g~~i~~~i~~ 461 (540)
..+..+|+.+|-...+
T Consensus 185 ~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 185 SFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHhcceeeeeccc
Confidence 9988888888766655
No 289
>PRK03612 spermidine synthase; Provisional
Probab=93.87 E-value=1.6 Score=44.24 Aligned_cols=49 Identities=31% Similarity=0.488 Sum_probs=35.3
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 046667 438 RSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLL 498 (540)
Q Consensus 438 ~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (540)
.+...|-..+.+.+|+++|+++.+++.- ..+|.....++.+.+.++..+
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLl------------p~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLL------------PRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHH------------HhcchHHHHHHHHHHHHHHHH
Confidence 4667888889999999999999998873 456666555555555544443
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.82 E-value=6.1 Score=38.05 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcc
Q 046667 484 NSLIVLGVVNLLGLLFTFLVP 504 (540)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~ 504 (540)
.-|.+..++.++|.+++..++
T Consensus 184 ~yF~~s~~~~llC~i~y~~l~ 204 (406)
T KOG1479|consen 184 IYFITSTVILLLCFVLYLVLP 204 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 345555556666666555443
No 291
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.81 E-value=0.41 Score=34.46 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=55.6
Q ss_pred HHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 046667 311 AFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFAL 390 (540)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~ 390 (540)
.-+.....+|...++.+++..+ +........++.++|.+...++.++.++++.+..+.+...+....+
T Consensus 7 gRFayTplLP~M~~~~~ls~~~------------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQ------------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3455556778888887777665 4447777888889999999999888888888888888888888777
Q ss_pred Hhcc
Q 046667 391 AIPY 394 (540)
Q Consensus 391 ~~~~ 394 (540)
.+..
T Consensus 75 a~~~ 78 (85)
T PF06779_consen 75 ALTH 78 (85)
T ss_pred HHHh
Confidence 7665
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.61 E-value=1.2 Score=42.11 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHh-----hcc
Q 046667 297 HLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFID-----KIG 371 (540)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d-----~~g 371 (540)
.++...+.+..++...-... ..|.+++..+.+-...+ ...+..-+..+= ++...++| |+|
T Consensus 32 ~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a---------~fS~ay~P~sLK-----llWaPiVDs~y~k~~G 96 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQA---------IFSFAYWPFSLK-----LLWAPIVDSVYSKRFG 96 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhh---------hhhhhhhHHHHH-----HHHHhhhHHHHHHhhc
Confidence 34445555555554433333 66777765443322211 111122222222 35556666 999
Q ss_pred chhHHHH-HHHHHHHHHHHHHhccccccc-CCc--hhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHH
Q 046667 372 RFAIQMM-GFFFMTVFMFALAIPYDHWTH-KSN--RLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAA 447 (540)
Q Consensus 372 ~r~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 447 (540)
||+..+. +..+.+..+..+......+.. +.. ...+.....+..-+....---....+...+..++..|-+......
T Consensus 97 rrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~V 176 (510)
T KOG3574|consen 97 RRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSV 176 (510)
T ss_pred cccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHH
Confidence 9887554 444445555555544333322 111 111111111111122211111223344455667777766655555
Q ss_pred HHHHhHHHHHHHHHH
Q 046667 448 SGKLGAIVGAFGFLY 462 (540)
Q Consensus 448 ~~~~g~~i~~~i~~~ 462 (540)
....|.+++..++-.
T Consensus 177 g~~~GyfL~~~ifLa 191 (510)
T KOG3574|consen 177 GQTAGYFLGNVVFLA 191 (510)
T ss_pred HHhhhHHhhcceeeE
Confidence 556666666555433
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.78 E-value=5 Score=39.46 Aligned_cols=111 Identities=9% Similarity=0.055 Sum_probs=71.9
Q ss_pred hhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc----cccc-----------CC----------chhHHHHH
Q 046667 355 STVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYD----HWTH-----------KS----------NRLGFVII 409 (540)
Q Consensus 355 ~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------~~----------~~~~~~~~ 409 (540)
+.++..++..++.+++.+.+.+.........+++++++... ..+. .+ +.|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 34555667788999999888776655555555544444321 0000 01 11333333
Q ss_pred HHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
+.+.-........-+.|..+.|+...++..+-.++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333333333334677888999999999999999999999999999998888875
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.74 E-value=7.5 Score=38.51 Aligned_cols=90 Identities=11% Similarity=0.059 Sum_probs=38.2
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceee
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFV 427 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (540)
..+...+..++..+....+..|+..|.-+..+.++..+..++..................++..+..+++.....+..++
T Consensus 50 ~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~g 129 (437)
T TIGR00939 50 YTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFG 129 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchh
Confidence 33444445555555666666776654333444343333332222211111111112223333333334444444445555
Q ss_pred eecccCchhhh
Q 046667 428 VPAEIFPARLR 438 (540)
Q Consensus 428 ~~~~~~p~~~~ 438 (540)
+.+ .+|++..
T Consensus 130 la~-~fp~~~~ 139 (437)
T TIGR00939 130 LAG-VFPSTYS 139 (437)
T ss_pred hcc-cCCHHHH
Confidence 544 5676643
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.07 E-value=5.4 Score=39.40 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=23.3
Q ss_pred eeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHh
Q 046667 426 FVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLA 464 (540)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~ 464 (540)
..++-.+..++.++.|........++|.+++-.++-.+-
T Consensus 140 DGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 140 DGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred ehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 344445566777777665555555666666666555443
No 296
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.75 E-value=1.3 Score=39.57 Aligned_cols=52 Identities=13% Similarity=0.010 Sum_probs=30.6
Q ss_pred HHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHH
Q 046667 321 DIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMT 384 (540)
Q Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~ 384 (540)
.+++..|+...+.++ ..+......++...+.|-++||.|||+.-+.-++...
T Consensus 62 yLYstYgFgkG~Igq------------LfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYi 113 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYI 113 (454)
T ss_pred eeehhcCccCCccce------------eeecccchHHHHHHHHHHHHhhhccccceeeehHHHH
Confidence 344455666655443 3333444445555678899999999987544433333
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=87.29 E-value=34 Score=35.29 Aligned_cols=132 Identities=17% Similarity=0.191 Sum_probs=78.9
Q ss_pred hhhHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhccccc---c------------cCCchhH-HHHHHHH-HHHHhh
Q 046667 357 VPGYWFTVAFIDKI-GRFAIQMMGFFFMTVFMFALAIPYDHW---T------------HKSNRLG-FVIIYSL-TFFFAN 418 (540)
Q Consensus 357 ~~~~~~~~~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~-~~~~~~~-~~~~~~ 418 (540)
....+++++++|.+ ||-+++.++..+..+++.++....... + ....... .++...+ ....+.
T Consensus 87 ~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~ 166 (571)
T KOG1237|consen 87 FLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGA 166 (571)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheecc
Confidence 44556888999974 788888888777777765554432111 0 0011111 1222222 222344
Q ss_pred cCCccceeeeecccCc----hhhhh--hhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHH
Q 046667 419 FGPNATTFVVPAEIFP----ARLRS--TCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVV 492 (540)
Q Consensus 419 ~~~~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 492 (540)
.+.-|...+.-+|-++ .+.+. .-+.......++|..++..+.-++. +..+|...|.+..++
T Consensus 167 gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq-------------~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 167 GGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ-------------DNVGWKLGFGIPTVL 233 (571)
T ss_pred CCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh-------------hcccceeeccHHHHH
Confidence 5556667777778777 22233 4555566667788888888887776 466788888777777
Q ss_pred HHHHHHHHH
Q 046667 493 NLLGLLFTF 501 (540)
Q Consensus 493 ~~~~~~~~~ 501 (540)
..++.++.+
T Consensus 234 ~~lai~iF~ 242 (571)
T KOG1237|consen 234 NALAILIFL 242 (571)
T ss_pred HHHHHHHHH
Confidence 776665554
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.06 E-value=2.4 Score=38.76 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=79.5
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhhhcc-hhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchh
Q 046667 68 NVSAAVNGVAFCGTLAGQLFFGWLGDKLG-RKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYP 146 (540)
Q Consensus 68 ~~~g~~~s~~~~~~~i~~~~~g~l~Dr~G-rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 146 (540)
+|.-|....|.+|..++.--.-..--++= --.++-+-..++.+...+..+.++ .+..++.-+.-|+-.|..++
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftps------i~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPS------IWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHhhcCchHHH
Confidence 46778888888876554322221111100 001122233444555566677777 68888888999998899999
Q ss_pred hHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 147 LSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 147 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
...--+.+-.++++|-.+++....+-.+|..++.+++..+
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 9988899989999999999999999999999998887665
No 299
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=83.76 E-value=40 Score=31.85 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=70.8
Q ss_pred CCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH----HHHHHHH-HHHHHhhccCCCCcchhhHHHHHHHHHHh
Q 046667 64 SLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG----MTLMLMV-ICSIASGLSFGNSPKGVMATLCFFRFWLG 138 (540)
Q Consensus 64 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~----~~~~~~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (540)
+-.--|.+.+.+.|...+.+|+...-++.|.--.-+.+. .|++.-. +..+-..|+.+. .++-+.+.+.-++.|
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~--~~~~~Vly~lt~vIG 116 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALES--APSRLVLYALTAVIG 116 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhcc--chHHHHHHHHHHHHH
Confidence 445568899999999999999999988887543332222 2222211 111222344331 123577888899999
Q ss_pred hccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
.-.|.-.|..+.++..... +-....+.....-.+|.+.+.++-.++
T Consensus 117 ~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHH
Confidence 9999999999999877322 111122222223556666655554443
No 300
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=83.71 E-value=17 Score=32.71 Aligned_cols=111 Identities=17% Similarity=0.209 Sum_probs=63.4
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhh-cchhHHHH----HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcccc
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYG----MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (540)
......-++..|+.+|.+..|.+... +-||+.+. .+.+++.++.++ +....+++...+..+++.-|+.|++.=+
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~Wg 220 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFLWG 220 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHHHh
Confidence 34555667777777888888888774 45665443 334555555444 3222222233467788888999987655
Q ss_pred chhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHH
Q 046667 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (540)
Q Consensus 144 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~ 181 (540)
..++...+=.|.= ..++-+..-.++..+++|.++-.+
T Consensus 221 iQ~ViL~lPhEyK-~~~pk~ig~~Fg~iWGfGY~~yTi 257 (267)
T PF07672_consen 221 IQGVILNLPHEYK-GYNPKKIGIQFGLIWGFGYIFYTI 257 (267)
T ss_pred hhHHHhcChhhhc-CCCcceehhHHHHHHHHHHHHHHH
Confidence 5555554444432 222333444455666677655443
No 301
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=81.91 E-value=9.7 Score=36.12 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHH
Q 046667 25 IIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMT 104 (540)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~ 104 (540)
.+.+.+++++.-+.--.........+.++++ -|-.....-...-.....+..++.|...|+..|+|++...
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~g---------nsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGG---------NSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcC---------ceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 3445566666666555666666666666632 2222233333333344567778889999999999998777
Q ss_pred HHHHH
Q 046667 105 LMLMV 109 (540)
Q Consensus 105 ~~~~~ 109 (540)
+.+.-
T Consensus 100 L~lqN 104 (503)
T KOG2601|consen 100 LLLQN 104 (503)
T ss_pred Hhhcc
Confidence 66543
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.07 E-value=5.2 Score=29.80 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=30.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhhhc-chhHHHHHHHHHHHH
Q 046667 68 NVSAAVNGVAFCGTLAGQLFFGWLGDKL-GRKKVYGMTLMLMVI 110 (540)
Q Consensus 68 ~~~g~~~s~~~~~~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~i 110 (540)
.....=.++=+++..+.....||+.||| |-+++.++..++.+.
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3445556677788888888899999997 777765555444433
No 303
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=80.75 E-value=55 Score=31.40 Aligned_cols=35 Identities=3% Similarity=-0.109 Sum_probs=24.4
Q ss_pred ccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhh
Q 046667 431 EIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ 465 (540)
Q Consensus 431 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~ 465 (540)
|--++.......+.....-.....++|.+.|.+.+
T Consensus 166 ~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 166 EGESPSVLTNMNATIRGIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred CCCCHHHHhhcchhhhhhhhhhhchhhhhhcccce
Confidence 33344444444566666777789999999999985
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.66 E-value=1.2 Score=41.95 Aligned_cols=115 Identities=11% Similarity=0.146 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh-cchhHHHHHH--HHHHHHHHHHhhccCCC----CcchhhHHHHHHHHHHhhccccc
Q 046667 72 AVNGVAFCGTLAGQLFFGWLGDK-LGRKKVYGMT--LMLMVICSIASGLSFGN----SPKGVMATLCFFRFWLGFGIGGD 144 (540)
Q Consensus 72 ~~~s~~~~~~~i~~~~~g~l~Dr-~Grr~~~~~~--~~~~~i~~~~~~~~~~~----~~~~~~~~l~~~r~l~G~~~g~~ 144 (540)
.+..++.++-.+|..+.++.-=+ -.+|++...+ =+++.-..++|..-++. ....+-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45678888999998887764211 1344443321 22222222223221110 00111366777889999999999
Q ss_pred hhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 046667 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIV 186 (540)
Q Consensus 145 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 186 (540)
...+..+..+..++++|..+..+......+|..+|..++..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp -HHHH-------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999888888889998888776543
No 305
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=69.00 E-value=8.6 Score=31.23 Aligned_cols=34 Identities=6% Similarity=0.085 Sum_probs=26.1
Q ss_pred ccceeeeecccCchhhhhhhhHHHHHHHHHhHHH
Q 046667 422 NATTFVVPAEIFPARLRSTCHGISAASGKLGAIV 455 (540)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 455 (540)
..+.|.+.+-...++..|+..|+-.+-.+++.+.
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3456777777788888899999998887776554
No 306
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=68.15 E-value=24 Score=34.43 Aligned_cols=27 Identities=19% Similarity=0.139 Sum_probs=11.4
Q ss_pred chhhhhhhhHHHHHHHHHhHHHHHHHHH
Q 046667 434 PARLRSTCHGISAASGKLGAIVGAFGFL 461 (540)
Q Consensus 434 p~~~~~~~~g~~~~~~~~g~~i~~~i~~ 461 (540)
|++.++.. .......+.+..--|++..
T Consensus 90 ~~~~~~~~-~~~~~~~N~~~lglpi~~~ 116 (385)
T PF03547_consen 90 PKEWRGVF-VLAASFGNTGFLGLPILQA 116 (385)
T ss_pred CcccceEE-EecccCCcchhhHHHHHHH
Confidence 44444432 2333344555444444433
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.59 E-value=52 Score=31.26 Aligned_cols=97 Identities=8% Similarity=-0.119 Sum_probs=69.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHH--HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccch
Q 046667 68 NVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYG--MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDY 145 (540)
Q Consensus 68 ~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (540)
..-|..-++..+..+++.+..|++--++.|..-++ ++.+..+...++++-+.+ .|...++-++.+.-.....
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~------Iw~~Ya~yvlfr~~y~l~i 344 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH------IWVCYAGYVLFRVIYQLTI 344 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc------eehhhhhHHHHHhhHhhhh
Confidence 34577777888889999999999988887764433 344444444445555555 6777777777776677778
Q ss_pred hhHHHHHhhhcCcccchhHHHHHHH
Q 046667 146 PLSATIMSEYANKKTRGAFIAAVFA 170 (540)
Q Consensus 146 ~~~~~~i~e~~~~~~r~~~~~~~~~ 170 (540)
+++..-+++....+.-|..+|+...
T Consensus 345 tiA~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 345 TIATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred hHHHHHHHHhhhhhhheeeeehHHH
Confidence 8888888888887777777775543
No 308
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=64.47 E-value=97 Score=27.00 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=17.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046667 158 KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAF 190 (540)
Q Consensus 158 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 190 (540)
.+++.+.-.......-++..+|..++..+....
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~ 189 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRRL 189 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 343333344445555666666666666665443
No 309
>PRK10263 DNA translocase FtsK; Provisional
Probab=62.82 E-value=90 Score=35.36 Aligned_cols=23 Identities=17% Similarity=0.085 Sum_probs=14.2
Q ss_pred HHHHHHHHhhhhhhhhhhhcchh
Q 046667 76 VAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 76 ~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+..++..+|..+...+..-||-=
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 44556666666666666666643
No 310
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=60.63 E-value=1.5e+02 Score=27.99 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=19.0
Q ss_pred hhHHHHHHHHhhccchhHHHHHHHHHH
Q 046667 358 PGYWFTVAFIDKIGRFAIQMMGFFFMT 384 (540)
Q Consensus 358 ~~~~~~~~l~d~~g~r~~~~~~~~~~~ 384 (540)
..+.+.+.+++++|-|+.+.++.....
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYA 99 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344455688999999999877654443
No 311
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=60.18 E-value=1e+02 Score=27.87 Aligned_cols=24 Identities=4% Similarity=-0.008 Sum_probs=11.3
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHH
Q 046667 437 LRSTCHGISAASGKLGAIVGAFGF 460 (540)
Q Consensus 437 ~~~~~~g~~~~~~~~g~~i~~~i~ 460 (540)
.|..+.|+...+......+.....
T Consensus 76 i~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 76 IKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHH
Confidence 344455555555544444444443
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.52 E-value=56 Score=24.60 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=28.4
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccc
Q 046667 435 ARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKD 468 (540)
Q Consensus 435 ~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~ 468 (540)
++.++.+.++-...-.+++++.....||+.|.+-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567888888888889999999999999998543
No 313
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=58.65 E-value=1.4e+02 Score=26.85 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=12.8
Q ss_pred HHHHHHhhccchhHHHHHHHH
Q 046667 362 FTVAFIDKIGRFAIQMMGFFF 382 (540)
Q Consensus 362 ~~~~l~d~~g~r~~~~~~~~~ 382 (540)
-+-.++.|+.-|.+.+.+..+
T Consensus 259 gGk~lAskIS~rtVt~~ggi~ 279 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGIL 279 (294)
T ss_pred hhHHHhhhheeEEEEEecchh
Confidence 344567777777766655443
No 314
>COG3619 Predicted membrane protein [Function unknown]
Probab=58.25 E-value=1.3e+02 Score=26.54 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=59.8
Q ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhhhcch-hH--HHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHh-----
Q 046667 67 PNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR-KK--VYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLG----- 138 (540)
Q Consensus 67 ~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr-r~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G----- 138 (540)
+...........+...++......+..|..| .. ....++++..+..+..++.++.. ......+..-|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~--~~~~~~il~~f~mg~Qnas 131 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESS--PDFVAVILVAFAMGIQNAS 131 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHH
Confidence 4466667777777777776666666655554 22 22333444444444444444311 11333333334444
Q ss_pred ------hccccchh-----hHHHHHhhhcCcc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046667 139 ------FGIGGDYP-----LSATIMSEYANKK-TRGAFIAAVFAMQGFGILAGGIFALIVSSAFN 191 (540)
Q Consensus 139 ------~~~g~~~~-----~~~~~i~e~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 191 (540)
...+-.+. ....-+.++...| +.-..-...+...-++.+.|...++++...++
T Consensus 132 f~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 132 FRKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222211 1122234444433 22233445556666777777777777765554
No 315
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=53.73 E-value=1.1e+02 Score=32.53 Aligned_cols=42 Identities=31% Similarity=0.267 Sum_probs=30.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 96 GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 96 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
||.+-++++.++++++++...+...+ -+.+...-++.+++.+
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~-----p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPK-----PWLFPFLLTLLTFGFI 96 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHH
Confidence 67788899999999999888877664 3555555555555433
No 316
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=53.16 E-value=91 Score=23.10 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 441 CHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 441 ~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
++|.....-..+-.++....-.+. ..|-.+|.+++++.+.+.....
T Consensus 26 ~~GfslS~L~~slgv~Q~~~kvia---------------lQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 26 AMGFSLSYLTASLGVGQFFIKVIA---------------LQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444445555555543332 3566777888887777766554
No 317
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=50.09 E-value=14 Score=28.75 Aligned_cols=11 Identities=18% Similarity=0.383 Sum_probs=3.5
Q ss_pred HHhcccCCCCC
Q 046667 500 TFLVPESKGKS 510 (540)
Q Consensus 500 ~~~~~~~~~~~ 510 (540)
.|++++.++|.
T Consensus 85 ~y~irR~~Kk~ 95 (122)
T PF01102_consen 85 SYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHS---
T ss_pred HHHHHHHhccC
Confidence 33444444443
No 318
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=49.63 E-value=1.4e+02 Score=31.73 Aligned_cols=48 Identities=31% Similarity=0.287 Sum_probs=32.5
Q ss_pred hhhhh---hc-chhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhcc
Q 046667 89 GWLGD---KL-GRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGI 141 (540)
Q Consensus 89 g~l~D---r~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (540)
+-++| ++ ||.+-++++.+++.++++...+...+ .+.+..+-++.+++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-----p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-----PWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHH
Confidence 44555 33 77788889999999888888876664 455655555555543
No 319
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=47.02 E-value=2.3e+02 Score=29.03 Aligned_cols=25 Identities=4% Similarity=0.143 Sum_probs=15.9
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccc
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGR 372 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~ 372 (540)
......+.+++++.+++++...++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 3444555666677777777777764
No 320
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=42.48 E-value=1.5e+02 Score=28.09 Aligned_cols=10 Identities=10% Similarity=0.202 Sum_probs=4.3
Q ss_pred HHHHHHhhcc
Q 046667 362 FTVAFIDKIG 371 (540)
Q Consensus 362 ~~~~l~d~~g 371 (540)
+--++.++..
T Consensus 186 ~~E~~v~~~~ 195 (334)
T PF06027_consen 186 LEEKLVKKAP 195 (334)
T ss_pred HHHHhcccCC
Confidence 3344444443
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.85 E-value=68 Score=24.21 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=42.9
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 68 NVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 68 ~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
...|=..++|.-.+.+.++++++..|+.-+.+.=.++..+..++..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4567788888888999999999999999888877788888777777766655
No 322
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=40.48 E-value=4e+02 Score=26.84 Aligned_cols=16 Identities=6% Similarity=0.029 Sum_probs=9.3
Q ss_pred HHHHHHhhccchhHHH
Q 046667 362 FTVAFIDKIGRFAIQM 377 (540)
Q Consensus 362 ~~~~l~d~~g~r~~~~ 377 (540)
....+.+|+++|+...
T Consensus 103 ~v~~l~k~l~~~~~~~ 118 (465)
T PF03606_consen 103 LVNLLIKPLKGKKNPL 118 (465)
T ss_pred HHHHHHHHhcCCcchh
Confidence 3456677776654433
No 323
>PRK02237 hypothetical protein; Provisional
Probab=36.50 E-value=1e+02 Score=23.32 Aligned_cols=51 Identities=12% Similarity=0.039 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccC
Q 046667 69 VSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSF 119 (540)
Q Consensus 69 ~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 119 (540)
..|=..++|.-.+.+.++++++..|+.-+-+.=.+|..+..+|..+..+.+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 467788888889999999999999999877777777777777776665554
No 324
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=36.02 E-value=1.8e+02 Score=23.92 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHHHHH
Q 046667 127 MATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (540)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g 179 (540)
+..++..-.+.|+|. ..+.+..++--..+++.|..+|+-.+-.+++.+.-
T Consensus 97 ~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 455666556655542 34566677777777888999999998888876543
No 325
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=34.30 E-value=1.4e+02 Score=19.69 Aligned_cols=28 Identities=7% Similarity=0.190 Sum_probs=19.2
Q ss_pred CcchHHHHHhhhHHHHHHHHHHHhCCCC
Q 046667 212 DYLWRIIVMVGALPAALTYYWRMKMPET 239 (540)
Q Consensus 212 ~~gwr~~f~~~~~~~~~~~~~~~~~~es 239 (540)
.++++....++.+.+++..++...+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4557888777777777766665556554
No 326
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=34.22 E-value=2e+02 Score=21.59 Aligned_cols=14 Identities=7% Similarity=0.442 Sum_probs=7.5
Q ss_pred chHHHHHhhhHHHH
Q 046667 214 LWRIIVMVGALPAA 227 (540)
Q Consensus 214 gwr~~f~~~~~~~~ 227 (540)
.|-.+|++.++..-
T Consensus 75 ~~tl~~lllGv~~G 88 (100)
T TIGR02230 75 SWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHHHHHHH
Confidence 46666666555433
No 327
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=33.93 E-value=3e+02 Score=25.46 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccc
Q 046667 102 GMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIG 142 (540)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (540)
+.+++++++++++..+...+ .+.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~-----~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPY-----PWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHHH
Confidence 45555665666666655543 3555555555555433
No 328
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.87 E-value=2e+02 Score=21.56 Aligned_cols=31 Identities=6% Similarity=-0.024 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 046667 357 VPGYWFTVAFIDKIGRFAIQMMGFFFMTVFM 387 (540)
Q Consensus 357 ~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~ 387 (540)
++|.+++-||=++++....+.+.+++.+++.
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 3444455556556776555544444444433
No 329
>PRK11469 hypothetical protein; Provisional
Probab=33.84 E-value=1.9e+02 Score=24.83 Aligned_cols=44 Identities=20% Similarity=0.098 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHhh-hhhhhhhhhcchhHHHHHHHHHHHHHHH
Q 046667 70 SAAVNGVAFCGTLAGQ-LFFGWLGDKLGRKKVYGMTLMLMVICSI 113 (540)
Q Consensus 70 ~g~~~s~~~~~~~i~~-~~~g~l~Dr~Grr~~~~~~~~~~~i~~~ 113 (540)
.........+...... .++.++.+++|||.-++-|.++..++.-
T Consensus 136 ~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 136 TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333 3444566677888777778877777643
No 330
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=33.56 E-value=1.2e+02 Score=21.49 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 454 IVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 454 ~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
.+.+++.|++.+ +.+.+++..++..++++++..
T Consensus 21 ~iisfi~Gy~~q---------------~~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 21 AIISFIVGYITQ---------------SFSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHhhee
Confidence 334566677775 556667666666666555443
No 331
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=31.84 E-value=3.1e+02 Score=23.06 Aligned_cols=23 Identities=13% Similarity=0.062 Sum_probs=13.4
Q ss_pred CchhhhhhhhHHHHHHHHHhHHH
Q 046667 433 FPARLRSTCHGISAASGKLGAIV 455 (540)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~i 455 (540)
-|.+.+.+++++......+-.++
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~ 132 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITII 132 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHH
Confidence 45556667777776655543333
No 332
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=31.77 E-value=1e+02 Score=26.18 Aligned_cols=24 Identities=21% Similarity=0.487 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcch
Q 046667 74 NGVAFCGTLAGQLFFGWLGDKLGR 97 (540)
Q Consensus 74 ~s~~~~~~~i~~~~~g~l~Dr~Gr 97 (540)
+.-|.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 445778889999999999999875
No 333
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=31.05 E-value=1e+02 Score=25.21 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcchhH
Q 046667 74 NGVAFCGTLAGQLFFGWLGDKLGRKK 99 (540)
Q Consensus 74 ~s~~~~~~~i~~~~~g~l~Dr~Grr~ 99 (540)
+.-|.+|+.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45677888999999999999988764
No 334
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=30.74 E-value=4.9e+02 Score=25.02 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=14.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHh
Q 046667 444 ISAASGKLGAIVGAFGFLYLA 464 (540)
Q Consensus 444 ~~~~~~~~g~~i~~~i~~~~~ 464 (540)
.....-++|+..+.+..+++.
T Consensus 143 ~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 143 RVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred hhhhhHhhhhhhHHHHHHHHH
Confidence 334446778877777777766
No 335
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=30.73 E-value=2.4e+02 Score=21.49 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=13.4
Q ss_pred HHhhccccchhhHHHHHhhhcC
Q 046667 136 WLGFGIGGDYPLSATIMSEYAN 157 (540)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~ 157 (540)
+.+.|..+..+.-.++..|...
T Consensus 58 ~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 58 ILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHhhHccccccHHHHHHHHHH
Confidence 3344444556677777777765
No 336
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=30.10 E-value=17 Score=32.56 Aligned_cols=14 Identities=21% Similarity=0.494 Sum_probs=0.0
Q ss_pred HHHHHHHHhcccCC
Q 046667 494 LLGLLFTFLVPESK 507 (540)
Q Consensus 494 ~~~~~~~~~~~~~~ 507 (540)
+++.++++++.+.+
T Consensus 176 FlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 176 FLAILIWLYVHDQR 189 (381)
T ss_dssp --------------
T ss_pred HHHHHHHHHhcCCC
Confidence 34444444565554
No 337
>PRK11469 hypothetical protein; Provisional
Probab=29.15 E-value=3.7e+02 Score=23.05 Aligned_cols=43 Identities=16% Similarity=0.082 Sum_probs=24.5
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFAL 390 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~ 390 (540)
......+....|..++.++.+++++|..++.+.++..++.-.+
T Consensus 140 ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 140 IGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444555566666677777776666665555554433
No 338
>PRK10263 DNA translocase FtsK; Provisional
Probab=28.31 E-value=5.2e+02 Score=29.81 Aligned_cols=29 Identities=7% Similarity=-0.012 Sum_probs=18.0
Q ss_pred hhhhhhHHHHHHHHhhccchhHHHHHHHH
Q 046667 354 CSTVPGYWFTVAFIDKIGRFAIQMMGFFF 382 (540)
Q Consensus 354 ~~~~~~~~~~~~l~d~~g~r~~~~~~~~~ 382 (540)
.|+++|.++...+...+|.-...++..++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLll 170 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCV 170 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46677777777777777765444443333
No 339
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=28.26 E-value=1.8e+02 Score=21.71 Aligned_cols=67 Identities=15% Similarity=0.074 Sum_probs=29.6
Q ss_pred HHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcchh
Q 046667 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRK 98 (540)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Grr 98 (540)
+.....+...+..+..+..+.-.++...+... +.+-.....-.-.....+.+.+++.|.+.||..||
T Consensus 39 l~a~~~G~~~gl~aa~ls~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 39 LIALRYGLRPGLFAALLSSLLLNFFFFPPPFY--DLTFLVYDPQDWITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHSS---SHHHHHHHHHHHHTTS-SS------TT-SS-HHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhCCCcc--ccchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 33444566666666666544432211111110 11111112223445566777888999999998765
No 340
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=28.25 E-value=1.1e+02 Score=16.78 Aligned_cols=10 Identities=20% Similarity=0.388 Sum_probs=3.7
Q ss_pred HHHhCCCChh
Q 046667 232 WRMKMPETAR 241 (540)
Q Consensus 232 ~~~~~~esp~ 241 (540)
...+++|+|+
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3456888885
No 341
>PRK11588 hypothetical protein; Provisional
Probab=27.92 E-value=5.4e+02 Score=26.16 Aligned_cols=151 Identities=9% Similarity=0.050 Sum_probs=0.0
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhh
Q 046667 362 FTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTC 441 (540)
Q Consensus 362 ~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 441 (540)
..+++.+|++.|..+++..+....++....... ..-...+.-.+.......+. +...|.+
T Consensus 135 ~i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~-------~Ee~i~f~pi~v~l~~alGy-------------D~ivg~a 194 (506)
T PRK11588 135 GILALIRKTRGNEILFIPVLFILFSLGGAVFGM-------GEEAIAFAIIIAPLMVRLGY-------------DSITTVL 194 (506)
T ss_pred HHHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHhCC-------------cHHHHHH
Q ss_pred hHHH-HHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhcccCCCCChhhhcccccc
Q 046667 442 HGIS-AASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGENQD 520 (540)
Q Consensus 442 ~g~~-~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (540)
.... ...+..++.+.|+..+.-.+..+ .+..+..++|...++......+..++.+..|-+++.+..-..+..++
T Consensus 195 i~~lg~~iGf~~s~~NPftvgIAQ~iAg-----lp~~SG~~~R~i~~~v~~~i~i~yv~~YA~kVkkdP~kS~~~~~~~~ 269 (506)
T PRK11588 195 VTYVATQIGFATSWMNPFSVAIAQGIAG-----VPVLSGSGLRIVMWVIFTLIGLIFTMVYASRVKKNPLLSRVHESDRF 269 (506)
T ss_pred HHHHHhhhhhcccccCccHHHHHHHhcC-----CCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhh
Q ss_pred cccccccCCCCCCCCCC
Q 046667 521 EGAQDMERDPSSNNSRT 537 (540)
Q Consensus 521 ~~~~~~~~~~~~~~~~~ 537 (540)
.+++..+.+..+-+.++
T Consensus 270 ~~~~~~~~~~~~~t~r~ 286 (506)
T PRK11588 270 FREKQADVEQRPFTFGD 286 (506)
T ss_pred hhhhhccccccCcChhh
No 342
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.86 E-value=38 Score=30.44 Aligned_cols=64 Identities=19% Similarity=0.251 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhh---------hhhcchh
Q 046667 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWL---------GDKLGRK 98 (540)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l---------~Dr~Grr 98 (540)
-.++.+.+....++.-..+-...++. +.+++....++-+..+.-++..++.|.. .||+|||
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqi----------glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQI----------GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHh----------cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 34555555555554444444444445 6888888888888888999999988754 4689999
Q ss_pred HHH
Q 046667 99 KVY 101 (540)
Q Consensus 99 ~~~ 101 (540)
+..
T Consensus 92 ~~w 94 (412)
T KOG4830|consen 92 MSW 94 (412)
T ss_pred eee
Confidence 753
No 343
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=27.69 E-value=2.3e+02 Score=21.49 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=20.9
Q ss_pred CCCCcchHHHHHhhhHHHHH-HHHHHHhCCCCh
Q 046667 209 PQADYLWRIIVMVGALPAAL-TYYWRMKMPETA 240 (540)
Q Consensus 209 ~~~~~gwr~~f~~~~~~~~~-~~~~~~~~~esp 240 (540)
..+..+|+.+|++...++++ +.+.+.+.||+.
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 34557899999986555544 444556677764
No 344
>COG2056 Predicted permease [General function prediction only]
Probab=27.67 E-value=3e+02 Score=26.25 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc
Q 046667 482 VKNSLIVLGVVNLLGLLFTFLV 503 (540)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~ 503 (540)
...+.++-+..++++.++..+.
T Consensus 190 V~~am~ip~lgMi~GLl~ai~~ 211 (444)
T COG2056 190 VPKAMWIPGLGMIVGLLLAIFV 211 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777777766644
No 345
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=27.51 E-value=2.4e+02 Score=22.00 Aligned_cols=28 Identities=14% Similarity=0.180 Sum_probs=13.9
Q ss_pred hHHHHHhhhHH-----HHHH-HHHHHhCCCChhh
Q 046667 215 WRIIVMVGALP-----AALT-YYWRMKMPETARY 242 (540)
Q Consensus 215 wr~~f~~~~~~-----~~~~-~~~~~~~~esp~~ 242 (540)
.|..+++..++ .+++ +++++.+|+.|..
T Consensus 36 VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 36 VRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhccCCccc
Confidence 46665543332 2232 3345667776653
No 346
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=27.06 E-value=2.6e+02 Score=21.25 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=33.5
Q ss_pred HHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 046667 348 QTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPY 394 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (540)
......+..+++. ..-+.+|.+.|+...+...+...+++.++....
T Consensus 6 ~L~lAi~~EV~~~-~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al 51 (106)
T COG2076 6 YLLLAILLEVVGT-TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL 51 (106)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 4455556666655 456788989998888888888888877777665
No 347
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=26.77 E-value=5.9e+02 Score=24.61 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=17.8
Q ss_pred hhcCcccchhHHHHHH-HHHHHHHHHHHHHH
Q 046667 154 EYANKKTRGAFIAAVF-AMQGFGILAGGIFA 183 (540)
Q Consensus 154 e~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~ 183 (540)
|+.|. +|.+..+... ...+.|.++||.++
T Consensus 48 DYvP~-~~~vlfghhf~sIAGaGPI~GPi~a 77 (376)
T PF02554_consen 48 DYVPT-NKWVLFGHHFASIAGAGPIVGPILA 77 (376)
T ss_pred CCCCC-chHHhhHHHHHHHhccccchHHHHH
Confidence 45553 4566777654 34456777777776
No 348
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=26.13 E-value=4.6e+02 Score=26.03 Aligned_cols=17 Identities=6% Similarity=0.327 Sum_probs=9.3
Q ss_pred HHHHHHhhccchhHHHH
Q 046667 362 FTVAFIDKIGRFAIQMM 378 (540)
Q Consensus 362 ~~~~l~d~~g~r~~~~~ 378 (540)
++-++.+.+.++++..+
T Consensus 310 ~~fflfE~~~~~~iHpi 326 (430)
T PF06123_consen 310 LAFFLFELLSKLRIHPI 326 (430)
T ss_pred HHHHHHHHHhcCcccHH
Confidence 44456666666655433
No 349
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.08 E-value=5.8e+02 Score=24.29 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=16.8
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 046667 473 DAGYPPGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
+..++.++.....|++...+...+....
T Consensus 180 ~r~fP~rFs~s~FFl~l~~~~~~alaAF 207 (439)
T KOG4255|consen 180 GRPFPPRFSVSTFFLALFAFTCAALAAF 207 (439)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 3447788887777766655554444333
No 350
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.69 E-value=2.2e+02 Score=22.91 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=18.4
Q ss_pred HHhhhcCcccchhHHHHHHHHHHHH
Q 046667 151 IMSEYANKKTRGAFIAAVFAMQGFG 175 (540)
Q Consensus 151 ~i~e~~~~~~r~~~~~~~~~~~~~G 175 (540)
-+.|++|++.|..+.+.+.......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999988887766544443
No 351
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=25.53 E-value=3.2e+02 Score=21.86 Aligned_cols=13 Identities=15% Similarity=-0.146 Sum_probs=5.1
Q ss_pred HhHHHHHHHHHHH
Q 046667 451 LGAIVGAFGFLYL 463 (540)
Q Consensus 451 ~g~~i~~~i~~~~ 463 (540)
.|..+--...|.+
T Consensus 68 ~GRGlfyif~G~l 80 (136)
T PF08507_consen 68 IGRGLFYIFLGTL 80 (136)
T ss_pred HHHHHHHHHHHHH
Confidence 3444333333333
No 352
>PRK11715 inner membrane protein; Provisional
Probab=24.26 E-value=5e+02 Score=25.84 Aligned_cols=18 Identities=6% Similarity=0.045 Sum_probs=9.6
Q ss_pred eecccCchhhhhhhhHHH
Q 046667 428 VPAEIFPARLRSTCHGIS 445 (540)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~ 445 (540)
|+.-+.....||..++..
T Consensus 375 Y~~~vl~~~k~g~~~~~~ 392 (436)
T PRK11715 375 YLSAVLRSWKRGLLFAAA 392 (436)
T ss_pred HHHHHHhcchHHHHHHHH
Confidence 444555555666555443
No 353
>COG4769 Predicted membrane protein [Function unknown]
Probab=24.10 E-value=61 Score=26.63 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=36.3
Q ss_pred HHHHHHHHhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhc
Q 046667 76 VAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFG 140 (540)
Q Consensus 76 ~~~~~~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 140 (540)
++.+..++.+...-++..++|+|..-.+|...+ -++.+| +.++++.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hN------l~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHN------LGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHh------HHHHHHHHHHHhcc
Confidence 344556666777778888999888755544333 355667 78999999887653
No 354
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=23.68 E-value=1.5e+02 Score=16.56 Aligned_cols=10 Identities=0% Similarity=0.245 Sum_probs=6.9
Q ss_pred HHhCCCChhh
Q 046667 233 RMKMPETARY 242 (540)
Q Consensus 233 ~~~~~esp~~ 242 (540)
..+++|+|+.
T Consensus 20 AIfFRepPri 29 (31)
T PRK11875 20 AIAFRDPPKI 29 (31)
T ss_pred hhhccCCCCC
Confidence 3567888874
No 355
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=23.48 E-value=5.6e+02 Score=23.25 Aligned_cols=24 Identities=4% Similarity=-0.128 Sum_probs=14.3
Q ss_pred hHHHHHhhhHHHHHHHHHHHhCCC
Q 046667 215 WRIIVMVGALPAALTYYWRMKMPE 238 (540)
Q Consensus 215 wr~~f~~~~~~~~~~~~~~~~~~e 238 (540)
..+.-+++..+.++...++.+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 455666666666666666555543
No 356
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=23.27 E-value=1.9e+02 Score=19.34 Aligned_cols=28 Identities=21% Similarity=0.269 Sum_probs=16.0
Q ss_pred cchHHHHHhhhHHH---HHH-HHHHHhCCCCh
Q 046667 213 YLWRIIVMVGALPA---ALT-YYWRMKMPETA 240 (540)
Q Consensus 213 ~gwr~~f~~~~~~~---~~~-~~~~~~~~esp 240 (540)
.-+|..|.+..++. ++. +++++.+|+.|
T Consensus 29 ~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 29 TLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 34788888765543 222 33346678765
No 357
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=23.11 E-value=1.3e+02 Score=23.44 Aligned_cols=23 Identities=22% Similarity=0.218 Sum_probs=11.8
Q ss_pred CCcchhhHHHHHHHHHHHHHHHH
Q 046667 478 PGIGVKNSLIVLGVVNLLGLLFT 500 (540)
Q Consensus 478 ~~~g~~~~~~~~~~~~~~~~~~~ 500 (540)
+...|.+..+..++++++..++.
T Consensus 31 D~tpWNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 31 DATPWNYSILALSFVVLVISFFL 53 (125)
T ss_pred CCCCcchHHHHHHHHHHHHHHHH
Confidence 44567766655554444433333
No 358
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.48 E-value=3.2e+02 Score=20.06 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=21.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 444 ISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 444 ~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
+...+-.+++++| ++.|+..+ ......++.++-+++.+++.+
T Consensus 27 ~~q~ilti~aiVg-~i~Gf~~Q---------------qls~tvy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 27 FQQLILTIGAIVG-FIYGFAQQ---------------QLSVTVYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHH-HHHHHHHH---------------HHHHHHHHHHHHHHHHHHhcC
Confidence 4444445555554 45556654 333445555555555555554
No 359
>COG1288 Predicted membrane protein [Function unknown]
Probab=22.11 E-value=7.9e+02 Score=24.43 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=18.4
Q ss_pred CCCcchHHHHHhhhHHHHHHHHHH--HhCCCChh
Q 046667 210 QADYLWRIIVMVGALPAALTYYWR--MKMPETAR 241 (540)
Q Consensus 210 ~~~~gwr~~f~~~~~~~~~~~~~~--~~~~esp~ 241 (540)
.+..+||...++......+..+.+ ..+++.|+
T Consensus 213 ~sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~ 246 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISIIYVYWYASKVKKDPT 246 (481)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 345679999988665544443332 23444444
No 360
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=21.23 E-value=5e+02 Score=21.78 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=10.7
Q ss_pred hHHHHHHHHhhccchhHHH
Q 046667 359 GYWFTVAFIDKIGRFAIQM 377 (540)
Q Consensus 359 ~~~~~~~l~d~~g~r~~~~ 377 (540)
.-++.|++.-|++.++...
T Consensus 129 ~L~ilG~~~a~~s~~~~~~ 147 (169)
T TIGR00267 129 ALLVLGVYLGRISRENILI 147 (169)
T ss_pred HHHHHHHHHHHHcCCcHHH
Confidence 3345666666766555443
No 361
>COG1288 Predicted membrane protein [Function unknown]
Probab=21.18 E-value=1.2e+02 Score=29.73 Aligned_cols=26 Identities=12% Similarity=0.300 Sum_probs=16.8
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHH
Q 046667 476 YPPGIGVKNSLIVLGVVNLLGLLFTF 501 (540)
Q Consensus 476 ~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (540)
..+..++|...++...+..+..++.+
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~~~Y 237 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYVYWY 237 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHH
Confidence 34678899888777666555444444
No 362
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=21.17 E-value=4.1e+02 Score=20.76 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC
Q 046667 103 MTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157 (540)
Q Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~ 157 (540)
...++..+++++.++...... + .. .|.+.+.|.-+.++.-.++..|...
T Consensus 35 gTl~VNi~GsfllG~~~~~~~-~--~~---~~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 35 GNLFANWTGALLIGIFAETVN-H--PQ---WKLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-C--HH---HHHHHHHHHhchHhhHHHHHHHHHH
Confidence 344555566666554432100 0 11 2333444444556677777777664
No 363
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=20.71 E-value=1.8e+02 Score=20.50 Aligned_cols=11 Identities=27% Similarity=0.265 Sum_probs=4.3
Q ss_pred hHHHHHHHHHH
Q 046667 484 NSLIVLGVVNL 494 (540)
Q Consensus 484 ~~~~~~~~~~~ 494 (540)
.+|.+..++.+
T Consensus 14 iVF~~L~lL~~ 24 (79)
T PF04277_consen 14 IVFLVLILLIL 24 (79)
T ss_pred HHHHHHHHHHH
Confidence 34444333333
No 364
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=20.56 E-value=2.2e+02 Score=18.79 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=16.8
Q ss_pred cchHHHHHhhhHHHHHHHHHH
Q 046667 213 YLWRIIVMVGALPAALTYYWR 233 (540)
Q Consensus 213 ~gwr~~f~~~~~~~~~~~~~~ 233 (540)
.|||...+++++.+++.+.+.
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred ccccchhhHHHHHHHHHHHHh
Confidence 459999999999888876554
No 365
>CHL00031 psbT photosystem II protein T
Probab=20.41 E-value=1.7e+02 Score=16.65 Aligned_cols=10 Identities=10% Similarity=0.165 Sum_probs=7.2
Q ss_pred HHhCCCChhh
Q 046667 233 RMKMPETARY 242 (540)
Q Consensus 233 ~~~~~esp~~ 242 (540)
..+++|+|+.
T Consensus 20 AI~FRePPri 29 (33)
T CHL00031 20 AIFFREPPKV 29 (33)
T ss_pred hheecCCCCC
Confidence 4568898874
No 366
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=20.05 E-value=3.9e+02 Score=21.48 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=17.8
Q ss_pred ecccCchhhhhhhhHHHHHHHHHh
Q 046667 429 PAEIFPARLRSTCHGISAASGKLG 452 (540)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~g 452 (540)
+.|++|+..|....+..+......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHH
Confidence 368999999998887776654443
Done!