Query 046669
Match_columns 187
No_of_seqs 131 out of 165
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 05:07:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046669.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046669hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q2oa_ d.174.1.1 (A:) Nitric 47.4 2.9 0.00021 36.1 1.3 22 152-173 56-77 (416)
2 d3e7ma1 d.174.1.1 (A:77-497) N 44.0 2 0.00014 37.3 -0.4 23 152-174 54-76 (421)
3 d1qrjb1 a.28.3.1 (B:131-214) H 23.7 18 0.0013 24.2 1.9 16 159-174 14-29 (84)
4 d1d1da1 a.28.3.1 (A:151-230) R 22.5 17 0.0012 24.2 1.5 18 158-175 13-30 (80)
5 d1om4a_ d.174.1.1 (A:) Nitric 21.7 18 0.0013 31.0 1.9 21 152-172 53-73 (418)
6 d2eiaa1 a.28.3.1 (A:148-222) E 21.5 23 0.0017 22.9 2.1 18 158-175 13-30 (75)
7 d1ivsa2 a.27.1.1 (A:579-796) V 18.0 26 0.0019 25.8 2.0 17 9-26 1-17 (218)
8 d2b3ja1 c.97.1.2 (A:1-151) tRN 16.1 42 0.0031 23.5 2.7 17 156-172 134-150 (151)
9 d1jzga_ b.6.1.1 (A:) Azurin {P 15.2 27 0.002 24.4 1.3 10 61-70 104-113 (128)
10 d1aora1 a.110.1.1 (A:211-605) 12.6 56 0.0041 26.8 2.8 23 7-31 315-337 (395)
No 1
>d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=47.38 E-value=2.9 Score=36.14 Aligned_cols=22 Identities=18% Similarity=0.502 Sum_probs=19.3
Q ss_pred cchhhHHHHHHHHHHHHHHhhh
Q 046669 152 DCHVDKEAEEFIKKFYQQLRLQ 173 (187)
Q Consensus 152 ~~~vD~~Ae~FI~~Fy~qlr~Q 173 (187)
-++|-.+|++||+.||..|+..
T Consensus 56 ~e~ll~eA~~Fi~q~y~e~~~~ 77 (416)
T d1q2oa_ 56 AEQLLSQARDFINQYYSSIKRS 77 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHhhCcc
Confidence 4689999999999999998754
No 2
>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.99 E-value=2 Score=37.25 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=19.0
Q ss_pred cchhhHHHHHHHHHHHHHHhhhH
Q 046669 152 DCHVDKEAEEFIKKFYQQLRLQK 174 (187)
Q Consensus 152 ~~~vD~~Ae~FI~~Fy~qlr~Q~ 174 (187)
-++|=.+|++||+.||..|+...
T Consensus 54 ~e~ll~eA~~Fi~qyy~e~~~~~ 76 (421)
T d3e7ma1 54 LEELLPHAIEFINQYYGSFKEAK 76 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhcccC
Confidence 36899999999999998876543
No 3
>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell leukemia virus type 1 [TaxId: 11908]}
Probab=23.66 E-value=18 Score=24.17 Aligned_cols=16 Identities=13% Similarity=0.175 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhhhH
Q 046669 159 AEEFIKKFYQQLRLQK 174 (187)
Q Consensus 159 Ae~FI~~Fy~qlr~Q~ 174 (187)
-++|++||++.++.+.
T Consensus 14 f~dfVdRl~~a~~~~~ 29 (84)
T d1qrjb1 14 YHAFVERLNIALDNGL 29 (84)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhc
Confidence 5789999999998765
No 4
>d1d1da1 a.28.3.1 (A:151-230) RSV capsid protein {Rous sarcoma virus [TaxId: 11886]}
Probab=22.47 E-value=17 Score=24.16 Aligned_cols=18 Identities=6% Similarity=0.165 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHhhhHH
Q 046669 158 EAEEFIKKFYQQLRLQKW 175 (187)
Q Consensus 158 ~Ae~FI~~Fy~qlr~Q~~ 175 (187)
--++|+.||++.++.++.
T Consensus 13 pf~dfVdRl~~al~~~~~ 30 (80)
T d1d1da1 13 SFVDFANRLIKAVEGSDL 30 (80)
T ss_dssp CHHHHHHHHHHHHHTSSC
T ss_pred cHHHHHHHHHHHHHHhcC
Confidence 457899999999998753
No 5
>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.71 E-value=18 Score=31.00 Aligned_cols=21 Identities=19% Similarity=0.445 Sum_probs=18.3
Q ss_pred cchhhHHHHHHHHHHHHHHhh
Q 046669 152 DCHVDKEAEEFIKKFYQQLRL 172 (187)
Q Consensus 152 ~~~vD~~Ae~FI~~Fy~qlr~ 172 (187)
.++|=.+|++||+.||..++.
T Consensus 53 ~e~ll~~A~~Fi~qyy~e~~~ 73 (418)
T d1om4a_ 53 KDQLFPLAKEFLDQYYSSIKR 73 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 467899999999999999864
No 6
>d2eiaa1 a.28.3.1 (A:148-222) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=21.51 E-value=23 Score=22.93 Aligned_cols=18 Identities=17% Similarity=0.405 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHhhhHH
Q 046669 158 EAEEFIKKFYQQLRLQKW 175 (187)
Q Consensus 158 ~Ae~FI~~Fy~qlr~Q~~ 175 (187)
--++|+.||++.++.+..
T Consensus 13 pf~dfVdRl~~a~~~~~~ 30 (75)
T d2eiaa1 13 PYPEFVDRLLSQIKSEGH 30 (75)
T ss_dssp CHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhhcC
Confidence 356799999999998753
No 7
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=17.99 E-value=26 Score=25.76 Aligned_cols=17 Identities=35% Similarity=0.556 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 046669 9 AKKLGRMVRVILFMIQKG 26 (187)
Q Consensus 9 akRlW~~vR~~~fmlRKG 26 (187)
|-|+||..|.++ |-..+
T Consensus 1 aNKlwNa~rF~~-~~~~~ 17 (218)
T d1ivsa2 1 ANKLYNAARFVL-LSREG 17 (218)
T ss_dssp HHHHHHHHHHHH-HHSSS
T ss_pred ChHHHHHHHHHH-hCcCC
Confidence 679999999764 44454
No 8
>d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]}
Probab=16.07 E-value=42 Score=23.45 Aligned_cols=17 Identities=18% Similarity=0.571 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHhh
Q 046669 156 DKEAEEFIKKFYQQLRL 172 (187)
Q Consensus 156 D~~Ae~FI~~Fy~qlr~ 172 (187)
.++|.+.++.||+++|.
T Consensus 134 ~~e~~~L~~~Ff~~~r~ 150 (151)
T d2b3ja1 134 KEACSTLLTTFFKNLRA 150 (151)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 78899999999999884
No 9
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.22 E-value=27 Score=24.37 Aligned_cols=10 Identities=30% Similarity=0.683 Sum_probs=8.2
Q ss_pred CCceeeecCC
Q 046669 61 CPREYEFSCS 70 (187)
Q Consensus 61 ~~~EYEFSCS 70 (187)
-++||+|-|+
T Consensus 104 ~~G~Y~f~Ct 113 (128)
T d1jzga_ 104 EGEQYMFFCT 113 (128)
T ss_dssp TTCCEEEECC
T ss_pred CCceEEEEEC
Confidence 4789999994
No 10
>d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=12.62 E-value=56 Score=26.76 Aligned_cols=23 Identities=17% Similarity=0.450 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCcchhh
Q 046669 7 VIAKKLGRMVRVILFMIQKGITKSK 31 (187)
Q Consensus 7 ~iakRlW~~vR~~~fmlRKGisKrK 31 (187)
-++.|.|++-|+ |.+|-|+.++|
T Consensus 315 ~~geRi~~l~R~--fN~r~G~~~~~ 337 (395)
T d1aora1 315 KIGERIWNAERL--FNLKAGLDPAR 337 (395)
T ss_dssp HHHHHHHHHHHH--HHHHHTCCHHH
T ss_pred HHHHHHHHHHHH--HHHHcCCChhh
Confidence 378999999994 57889987553
Done!