BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046670
WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL
KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII
SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK

High Scoring Gene Products

Symbol, full name Information P value
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 8.0e-37
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 1.8e-32
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 2.3e-32
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 3.5e-12

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046670
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   396  8.0e-37   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   355  1.8e-32   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   354  2.3e-32   1
TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...   170  3.5e-12   1


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 73/153 (47%), Positives = 107/153 (69%)

Query:     1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
             WKR + +  +  +  R +++Q A+++HIQ +V GRPI  TR L+FA A    F  VI++ 
Sbjct:   229 WKRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALF 288

Query:    61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
             KDIPD +GD+ FGIR+ SV LG++ V W CV +L +AY  A++VG TS P++ SK+++++
Sbjct:   289 KDIPDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATS-PFIWSKVISVV 347

Query:   121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
              H +LAT LW +A++VDLSSK    S YMFIWK
Sbjct:   348 GHVILATTLWARAKSVDLSSKTEITSCYMFIWK 380


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 65/153 (42%), Positives = 100/153 (65%)

Query:     1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
             WK+   LT +  + +  +     +F+H+Q  V  RP    R L+F  AI   +  VI++ 
Sbjct:   246 WKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALF 305

Query:    61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
             KDIPD +GD +FGI++LS+ LG + V W+CV +L + YG  ++VG TS P L SK++T++
Sbjct:   306 KDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATS-PILWSKIITVL 364

Query:   121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
              H++LA++LW+ A++VDL+S     SFYMFIWK
Sbjct:   365 GHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWK 397


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 65/153 (42%), Positives = 99/153 (64%)

Query:     1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
             WK+   LT +  +    +     +F+H+Q  V  RP    R L+F  AI   +  VI++ 
Sbjct:   243 WKKYPVLTAISFIANVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALF 302

Query:    61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
             KDIPD +GD +FGI++LS+ LG + V W+CV +L +AYG  ++VG TS P L SK++T++
Sbjct:   303 KDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMAYGVTILVGATS-PILWSKIITVL 361

Query:   121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
              H++LA++LW+ A++ DL+S     SFYMFIWK
Sbjct:   362 GHAILASVLWYHAKSTDLTSNVVLQSFYMFIWK 394


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 170 (64.9 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 45/153 (29%), Positives = 76/153 (49%)

Query:     2 KRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVLK 61
             KR      L     RG LL F  + H  +  LG P   +  + F  +    F  VI++ K
Sbjct:   230 KRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITK 288

Query:    62 DIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTIIS 121
             D+PD +GDR+F I TL+  LG  ++ +L   +L++ Y +A+ +     P +    + I +
Sbjct:   289 DLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISLAFYM-PQVFRGSLMIPA 347

Query:   122 HSMLATLLWHQAQTVDLSS--KASTLSFYMFIW 152
             H +LA+ L  Q   ++ ++  K +   +Y FIW
Sbjct:   348 HVILASGLIFQTWVLEKANYTKEAISGYYRFIW 380


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.141   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       153   0.00081  105 3  11 21  0.36    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  562 (60 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.35u 0.09s 13.44t   Elapsed:  00:00:01
  Total cpu time:  13.35u 0.09s 13.44t   Elapsed:  00:00:02
  Start:  Thu May  9 18:01:29 2013   End:  Thu May  9 18:01:31 2013

Back to top