BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046670
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
WKR + + + + R +++Q A+++HIQ +V GRPI TR L+FA A F VI++
Sbjct: 229 WKRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALF 288
Query: 61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
KDIPD +GD+ FGIR+ SV LG++ V W CV +L +AY A++VG T SP++ SK+++++
Sbjct: 289 KDIPDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGAT-SPFIWSKVISVV 347
Query: 121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
H +LAT LW +A++VDLSSK S YMFIWK
Sbjct: 348 GHVILATTLWARAKSVDLSSKTEITSCYMFIWK 380
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
WKRS+ + L + R +++Q A+F+HIQ +V RP TR L+FA A F VI++
Sbjct: 240 WKRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALF 299
Query: 61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
KDIPD +GDR FGI++ SV LG++ V W+CV +L +AY A+++G TS+ L SK T++
Sbjct: 300 KDIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSA-CLWSKYATVV 358
Query: 121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
H++LA +LW++++++DL+SK + SFYMFIWK
Sbjct: 359 GHAILAAILWNRSRSIDLTSKTAITSFYMFIWK 391
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Query: 1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
WK+ LT + + + + +F+H+Q V RP R L+F AI + VI++
Sbjct: 246 WKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALF 305
Query: 61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
KDIPD +GD +FGI++LS+ LG + V W+CV +L + YG ++VG T SP L SK++T++
Sbjct: 306 KDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGAT-SPILWSKIITVL 364
Query: 121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
H++LA++LW+ A++VDL+S SFYMFIWK
Sbjct: 365 GHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWK 397
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 1 WKRSSFLTTLYTVLERGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVL 60
WKR F+ + + L L +YF H+Q VL RPI R+L F VA + +++
Sbjct: 245 WKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFPRSLGFLVAFMTFYSLGLALS 304
Query: 61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTII 120
KDIPD +GD+E GI + +V LG++ W+CV +A+G ++ G + S + +K+ T +
Sbjct: 305 KDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCS-HFWTKIFTGM 363
Query: 121 SHSMLATLLWHQAQTVDLSSKASTLSFYMFIWK 153
+++LA++LW+QA++VDLS KAST SFYMFIWK
Sbjct: 364 GNAVLASILWYQAKSVDLSDKASTGSFYMFIWK 396
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 16 RGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVLKDIPDEDGDREFGIR 75
RG LL F + H + LG P + + F + F VI++ KD+PD +GDR+F I
Sbjct: 237 RGFLLNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQIS 295
Query: 76 TLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTIISHSMLATLLWHQAQT 135
TL+ LG ++ +L +L++ Y +A+ + P + + I +H +LA+ L Q
Sbjct: 296 TLATKLGVRNIAFLGSGLLLVNYVSAISLAFY-MPQVFRGSLMIPAHVILASGLIFQTWV 354
Query: 136 VDLSS--KASTLSFYMFIWK 153
++ ++ K + +Y FIW
Sbjct: 355 LEKANYTKEAISGYYRFIWN 374
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 16 RGLLLQFAYFIHIQKYVLGRPIAITRTLMFAVAIKCCFCFVISVLKDIPDEDGDREFGIR 75
RG LL F + + + LG + + F F VI++ KD+PD +GDR++ I
Sbjct: 230 RGFLLNFGVY-YATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQIS 288
Query: 76 TLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTIISHSMLATLLWHQAQT 135
TL+ LG ++ +L +L+ Y AA+ V P + V + H+ LA + Q
Sbjct: 289 TLATKLGVRNIAFLGSGLLIANYVAAIAVAFL-MPQAFRRTVMVPVHAALAVGIIFQTWV 347
Query: 136 VDLS--SKASTLSFYMFIWK 153
++ + +K + +Y FIW
Sbjct: 348 LEQAKYTKDAISQYYRFIWN 367
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 48 AIKCCFCFVISVLKDIPDEDGDREFGIRTLSVILGKESVLW 88
A+ C ++KD+ D DGDR G+RTL +++G+ L+
Sbjct: 162 ALAACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERRSLY 202
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 36 PIAITRTLMFAVAIKCCFCFVISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLV 95
P + TL++++A I+++ D +GDR G+++L V G E+ W+CV
Sbjct: 264 PDVVVLTLLYSIA-----GLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICV---- 314
Query: 96 IAYGAAVIVGLTSSPYLLS 114
GA I L+ + YLL+
Sbjct: 315 ---GAIDITQLSVAGYLLA 330
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 57 ISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLS 114
I+++ D +GDR G+++L V G E+ W+CV GA I L+ + YLLS
Sbjct: 271 IAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICV-------GAIDITQLSVAAYLLS 321
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 57 ISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLS 114
I+++ D +GDR G+++L V G E+ W+CV GA I L+ + YL S
Sbjct: 269 IAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICV-------GAIDITQLSVAGYLFS 319
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 58 SVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLS 114
++KDI D DGDR+ G++TL +++G + VL++A A+++ PY++
Sbjct: 179 EIIKDIEDLDGDRKEGLQTLPIVIGVTPAYRVATGVLLVAVIASIV------PYVIG 229
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKES 85
C F +S ++KDI D +GD+ G RTL +++GK+
Sbjct: 162 CAFLVNVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKES 85
C F +S ++KDI D +GD+ G RTL +I+G++
Sbjct: 162 CAFLVNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 55 FVISVLKDIPDEDGDREFGIRTLSVILGKESVL 87
F V+KD+ D GDR G+RTL V++G + L
Sbjct: 169 FAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 55 FVISVLKDIPDEDGDREFGIRTLSVILGKESVL 87
F V+KD+ D GDR G+RTL V++G + L
Sbjct: 169 FAREVIKDVEDLAGDRAAGLRTLPVVVGHQRAL 201
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKE 84
C F +S ++KDI D +GD + G +TL +I+GK
Sbjct: 162 CAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKR 197
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKESVLWLCVY 92
C F ++ ++KDI D +GD + G +TL +ILG+ ++ +
Sbjct: 162 CAFLVNVAREIVKDIEDVEGDLKKGAKTLPIILGRRKAAYVAAF 205
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 58 SVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVL--VIAYGAAVIVGLTSSPYLLSK 115
++KD D DGD+ G+ +L + GK S+ ++L ++ I+G+ +PYL++
Sbjct: 173 EIIKDYEDLDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAI 232
Query: 116 LV 117
++
Sbjct: 233 MI 234
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 52 CFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSS 109
F F +S +K I D +GD+ G+ TL+V LG++S W+ +++ +++ +
Sbjct: 163 IFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLGEKST-WIIAKIIL-----GILIFTSPL 216
Query: 110 PYLLS----KLVTIISHSMLATLLWHQAQTVDLSSKASTL 145
PY L L+ I++ +L + T++ ++KA +L
Sbjct: 217 PYFLGFNVIYLIGILALDVLLVYILILHNTIESATKARSL 256
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 57 ISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIA 97
I L D +GDR+ G+R+L V+LG E L V+ +A
Sbjct: 191 IMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|Q9V3R8|UBIA1_DROME UbiA prenyltransferase domain-containing protein 1 homolog
OS=Drosophila melanogaster GN=heix PE=2 SV=1
Length = 359
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 61 KDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKLVTI 119
+ D D DR GI TL++++G+ + L +L Y I GL S + L LVT+
Sbjct: 249 NNTRDADNDRRAGIVTLAILIGRTASHVLYAMLLFAPYSLFFIFGLKYSLWFLLPLVTL 307
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKESVLWLCV 91
C F ++ V+KDI D +GD G +TL +I GK+ ++ V
Sbjct: 162 CAFLVNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGV 204
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 59 VLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIA 97
++KDI D GD G +TL +GK L VL++A
Sbjct: 169 IVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|Q12S01|UBIA_SHEDO 4-hydroxybenzoate octaprenyltransferase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ubiA PE=3
SV=2
Length = 293
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 48 AIKCCFCFVISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLT 107
A C+ + + D D D + GI++ +++ G+ W+ V+ L +A+G ++ GL+
Sbjct: 177 AANWCWTVAYDTMYAMIDRDDDLKVGIKSSAILFGRFDRQWIAVFQL-MAFGCFLMAGLS 235
Query: 108 SS 109
+
Sbjct: 236 AE 237
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 58 SVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLS 114
++KD D +GD++ G+ +L + GK+S L+ +++V+A V L+ PY+L
Sbjct: 176 EIVKDFEDMEGDKKEGVISLPIKYGKKS-LYFATFLVVLA------VILSPLPYILK 225
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKE 84
C F ++ V+KDI D +GD G +TL +++G++
Sbjct: 162 CAFLVNVAREVIKDIEDIEGDMAKGAKTLPILIGRK 197
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 51 CCFCFVIS--VLKDIPDEDGDREFGIRTLSVILGKES 85
C F ++ + KDI D +GD+ G +TL ++ G ES
Sbjct: 162 CAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIES 198
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 59 VLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYLLSKL 116
++KD+ D GD++ G RTL +++G + ++ A+G ++ + PYL S L
Sbjct: 180 IVKDVEDIVGDKKDGARTLPILIGAKKASYIAA-----AFGFTAMLA-SPVPYLQSIL 231
>sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine synthase
OS=Caenorhabditis elegans GN=F10F2.2 PE=3 SV=3
Length = 1324
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 106 LTSSPYLLS----KLVTIISHSMLATLLWHQAQ 134
+T P L+S KLVT++SHS T +W ++Q
Sbjct: 44 ITQEPELISSNWEKLVTLLSHSPFETSVWKESQ 76
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 56 VISVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVIAYGAAVIVGLTSSPYL 112
V +LKD+ D +GD G++TL + G E V V IA LT PYL
Sbjct: 165 VREILKDLEDVEGDAALGLKTLPIAYG-EGVALRVATVFAIALAV-----LTPLPYL 215
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 58 SVLKDIPDEDGDREFGIRTLSVILGKESVLWLCVYVLVI 96
++KDI D +GD++ TL +I G + + L V + +I
Sbjct: 166 EIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAVILNII 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.141 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,191,520
Number of Sequences: 539616
Number of extensions: 1593370
Number of successful extensions: 5116
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5083
Number of HSP's gapped (non-prelim): 50
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)