BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046673
(447 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 162/401 (40%), Gaps = 62/401 (15%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPR--Q 143
+P+ + + Y I P+ E L+VD +W C N T+ R Q
Sbjct: 11 VPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQ--NYVSSTYRPVRCRTSQ 68
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVC-VYDERYANGASTKGIASEDLFFFFPD------ 196
+ G + C D C N C N+ C V+ E +T G +ED+
Sbjct: 69 CSLSGSIACGD--CFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSG 126
Query: 197 ---SIPEFLVFGCSDDN--QGFPFGPDNRISGILGLSMSPLSLISQIGG--DINHKFSYC 249
++P F +F C+ + Q G + G+ GL + ++L SQ KF+ C
Sbjct: 127 RVVTVPRF-IFSCAPTSLLQNLASG----VVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181
Query: 250 LVYPLAS-STLTFGDVDTSGLP--------IQSTPFVT-PHAPGYSN--------YYLNL 291
L +S S + FG+ + LP + TP +T P + ++ Y++ +
Sbjct: 182 LSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241
Query: 292 IDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFH 351
+ I + + NT + GLGG + + + +T +E + Y+ V E F+ +
Sbjct: 242 KSIKINSKIVAL--NTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN 299
Query: 352 LIRVQTATGFELCYRQDPNFT-----DYPSMTLHFQGAD--WPL--PKEYVYIFNTAGEK 402
+ RV + F C+ D + PS+ L Q W + VYI +
Sbjct: 300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI----NDN 355
Query: 403 YFCVALL---PDDRLTI-IGAYHQQNVLVIYDVGNNRLQFA 439
C+ ++ + R +I IG + ++ LV +D+ +R+ F+
Sbjct: 356 VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 162/401 (40%), Gaps = 62/401 (15%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPR--Q 143
+P+ + + Y I P+ E L+VD +W C N T+ R Q
Sbjct: 11 VPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQ--NYVSSTYRPVRCRTSQ 68
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVC-VYDERYANGASTKGIASEDLFFFFPD------ 196
+ G + C D C N C N+ C V+ E +T G +ED+
Sbjct: 69 CSLSGSIACGD--CFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSG 126
Query: 197 ---SIPEFLVFGCSDDN--QGFPFGPDNRISGILGLSMSPLSLISQIGG--DINHKFSYC 249
++P F +F C+ + Q G + G+ GL + ++L SQ KF+ C
Sbjct: 127 RVVTVPRF-IFSCAPTSLLQNLASG----VVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181
Query: 250 LVYPLAS-STLTFGDVDTSGLP--------IQSTPFVT-PHAPGYSN--------YYLNL 291
L +S S + FG+ + LP + TP +T P + ++ Y++ +
Sbjct: 182 LSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241
Query: 292 IDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFH 351
+ I + + NT + GLGG + + + +T +E + Y+ V E F+ +
Sbjct: 242 KSIKINSKIVAL--NTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN 299
Query: 352 LIRVQTATGFELCYRQDPNFT-----DYPSMTLHFQGAD--WPL--PKEYVYIFNTAGEK 402
+ RV + F C+ D + PS+ L Q W + VYI +
Sbjct: 300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI----NDN 355
Query: 403 YFCVALL---PDDRLTI-IGAYHQQNVLVIYDVGNNRLQFA 439
C+ ++ + R +I IG + ++ LV +D+ +R+ F+
Sbjct: 356 VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
Length = 403
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 154/400 (38%), Gaps = 74/400 (18%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSA 145
+P+ + + L++ N+ P+ Q P+LVD + +W C+ S
Sbjct: 12 LPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-------------QQYSSK 58
Query: 146 TYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIAS--------------EDLF 191
TY C+ C C++ C R +T G+ S ED+
Sbjct: 59 TYQAPFCHSTQCSRANTHQCLS--CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVL 116
Query: 192 FFFPD-----------SIPEFLVFGCSDD---NQGFPFGPDNRISGILGLSMSPLSLISQ 237
++P+FL F C+ +G P G+ GL +P+SL +Q
Sbjct: 117 AIHATQGSTQQLGPLVTVPQFL-FSCAPSFLVQKGLP----RNTQGVAGLGHAPISLPNQ 171
Query: 238 IGGD--INHKFSYCLV-YPLASSTLTFGDVDTSGLPIQS---------TPFVTPHAPGYS 285
+ + +F+ CL YP + + FGD + Q+ TP T G
Sbjct: 172 LASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPL-TITLQGEY 230
Query: 286 NYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMA 345
N +N I ++ +FP N + V GG ++ + + ++++ Y+ + F
Sbjct: 231 NVRVNSIRIN---QHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQ 287
Query: 346 YFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHF---QGADWPLPKEYVYIFNTAGEK 402
+ +V++ F LC+ + YPS+ L G W + E + + G
Sbjct: 288 QLPK--QAQVKSVAPFGLCFNSN-KINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVT 344
Query: 403 YFCV---ALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFA 439
V + P +T +GA + LV++D+ +R+ F+
Sbjct: 345 CLGVMNGGMQPRAEIT-LGARQLEENLVVFDLARSRVGFS 383
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6
pdb|1UH8|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 8.0
pdb|1UH9|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 7.0
Length = 325
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Query: 85 TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
T+P+T Y+ + IG P + L DT S +W C NC + YDP QS
Sbjct: 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTK-YDPNQS 63
Query: 145 ATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVF 204
+TY + R +S Y +G+S GI ++D I +
Sbjct: 64 STY---------QADGRTWSI---------SYGDGSSASGILAKDNVNLGGLLIKGQTIE 105
Query: 205 GCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLV 251
+ F GP++ G+LGL ++ + + +++ S L+
Sbjct: 106 LAKREAASFASGPND---GLLGLGFDTITTVRGVKTPMDNLISQGLI 149
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic
Proteinase From Rhizopus Chinensis. Implications For A
Mechanism Of Action
pdb|4APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|5APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|6APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|2APR|A Chain A, Structure And Refinement At 1.8 Angstroms Resolution Of
The Aspartic Proteinase From Rhizopus Chinensis
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 22/167 (13%)
Query: 85 TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
T+P+T Y+ + IG P + L DT S +W C NC YDP QS
Sbjct: 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTK-YDPNQS 63
Query: 145 ATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVF 204
+TY + R +S Y +G+S GI ++D I +
Sbjct: 64 STY---------QADGRTWSI---------SYGDGSSASGILAKDNVNLGGLLIKGQTIE 105
Query: 205 GCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLV 251
+ F GP++ G+LGL ++ + + +++ S L+
Sbjct: 106 LAKREAASFASGPND---GLLGLGFDTITTVRGVKTPMDNLISQGLI 149
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 140/375 (37%), Gaps = 80/375 (21%)
Query: 90 MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQ---TFPIYDPRQSAT 146
M + YF I IG P +L DT S +W P + C Q + ++P +S+T
Sbjct: 7 MAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWV---PSVYCQSQACTSHSRFNPSESST 63
Query: 147 YGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGC 206
Y N + FS +Y +G+ T G D +P FG
Sbjct: 64 Y---------STNGQTFSL---------QYGSGSLT-GFFGYDTLTVQSIQVPN-QEFGL 103
Query: 207 SDDNQGFPFGPDNRISGILGLSMSPLSL---------ISQIGGDINHKFSYCLVYPLASS 257
S++ G F + GI+GL+ LS+ + Q G + FS L SS
Sbjct: 104 SENEPGTNF-VYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSS 162
Query: 258 --TLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVER 315
+ FG VD+S Q AP Y IG F I
Sbjct: 163 GGAVVFGGVDSSLYTGQ-----IYWAPVTQELYWQ-----IGIEE-------FLIGGQAS 205
Query: 316 GL--GGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNF 371
G GC I+D+G++ ++ + +L+ A + + V +
Sbjct: 206 GWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNS-----------I 254
Query: 372 TDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLP-------DDRLTIIGAYHQQN 424
+ PS+T G ++PLP YI + G Y V + P L I+G ++
Sbjct: 255 QNLPSLTFIINGVEFPLPPS-SYILSNNG--YCTVGVEPTYLSSQNGQPLWILGDVFLRS 311
Query: 425 VLVIYDVGNNRLQFA 439
+YD+GNNR+ FA
Sbjct: 312 YYSVYDLGNNRVGFA 326
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L.
pdb|1B5F|C Chain C, Native Cardosin A From Cynara Cardunculus L
Length = 239
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 91 NTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFP-QTFPIYDPRQSATY 147
N + + YF IGIG P + ++ DT S ++W CIN + +Y+ S+TY
Sbjct: 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTY 66
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|B Chain B, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|C Chain C, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
pdb|2EWY|D Chain D, Crystal Structure Of Human Bace2 In Complex With A
Hydroxyethylenamine Transition-State Inhibitor
Length = 383
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 149/380 (39%), Gaps = 71/380 (18%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPL 156
Y++ + IG P + +LVDT S P + + T+ +D +S+TY
Sbjct: 15 YYLEMLIGTPPQKLQILVDTGSSNFAVAGTP--HSYIDTY--FDTERSSTY--------- 61
Query: 157 CENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLV-FGCSDDNQGFPF 215
++ F DV V +Y G+ T G EDL FLV +++ F F
Sbjct: 62 --RSKGF----DVTV---KYTQGSWT-GFVGEDLVTIPKGFNTSFLVNIATIFESENF-F 110
Query: 216 GPDNRISGILGLSMSPL------------SLISQIGGDINHKFSYCLV---YPLASSTLT 260
P + +GILGL+ + L SL++Q +I + FS + P+A S
Sbjct: 111 LPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQ--ANIPNVFSMQMCGAGLPVAGSGTN 168
Query: 261 FGDVDTSGLP---IQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGL 317
G + G+ + + TP + Y + ++ + IG + E
Sbjct: 169 GGSLVLGGIEPSLYKGDIWYTPIKEEW-YYQIEILKLEIGGQSLNLDCR-------EYNA 220
Query: 318 GGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLI-----RVQTATGFELCYRQDPNFT 372
I+DSG T++ R P ++V + + R LI T + + ++
Sbjct: 221 DKAIVDSG---TTLLRLP-QKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWS 276
Query: 373 DYPSMTLHFQGADWP-------LPKEYVYIFNTAGEKYFC--VALLPDDRLTIIGAYHQQ 423
+P ++++ + + LP+ Y+ AG Y C + P +IGA +
Sbjct: 277 YFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVME 336
Query: 424 NVLVIYDVGNNRLQFAPVVC 443
VI+D R+ FA C
Sbjct: 337 GFYVIFDRAQKRVGFAASPC 356
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution
Length = 320
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 133/367 (36%), Gaps = 76/367 (20%)
Query: 95 SLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCND 154
S YF I IG P + ++ DT S +W C + + +DPR+S+T+ L
Sbjct: 11 SQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNL--GK 68
Query: 155 PLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFP 214
PL + Y G S +G D P V G S + G
Sbjct: 69 PLSIH----------------YGTG-SMEGFLGYDTVTVSNIVDPNQTV-GLSTEQPGEV 110
Query: 215 FGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLAS---------STLTFGDVD 265
F + GILGL+ L+ + N + + L S S LT G +D
Sbjct: 111 F-TYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAID 169
Query: 266 TSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERG-LGGC--IM 322
P Y L+ + V++ + F ++ I V +GGC I+
Sbjct: 170 ----------------PSYYTGSLHWVPVTLQQY-WQFTVDSVTINGVAVACVGGCQAIL 212
Query: 323 DSGSAFTSMERTPYRQVLEQFMAYF---ERFHLIRVQTATGFELCYRQDPNFTDYPSMTL 379
D+G TS+ P +L+ MA R+ V N P++
Sbjct: 213 DTG---TSVLFGPSSDILKIQMAIGATENRYGEFDVNCG-----------NLRSMPTVVF 258
Query: 380 HFQGADWPL-PKEYVYIFNTAGEKYFCVALLPDD---RLTIIGAYHQQNVLVIYDVGNNR 435
G D+PL P Y T+ ++ FC + D L I+G + ++D NNR
Sbjct: 259 EINGRDYPLSPSAY-----TSKDQGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNR 313
Query: 436 LQFAPVV 442
+ A +
Sbjct: 314 VGLAKAI 320
>pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex
Lacteus
Length = 340
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYG 148
Y VN+G+G P T LLVDT S W T + S TYG
Sbjct: 14 YVVNVGVGSPATTYSLLVDTGSSNTWLGADKSY-VKTSTSSATSDKVSVTYG 64
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 125/375 (33%), Gaps = 81/375 (21%)
Query: 91 NTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRL 150
N + Y+ I IG P ++ DT S +W C + PRQS+TY
Sbjct: 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTY--- 64
Query: 151 PCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDN 210
V D Y G +GI +D S P G S
Sbjct: 65 ---------------VETGKTVDLTYGTGG-MRGILGQDTVSVGGGSDPN-QELGESQTE 107
Query: 211 QGFPFGPDNRISGILGLS---------------MSPLSLISQIGGDINHKFSYCLVYPLA 255
G PF GILGL+ M SL+ + D+ FS+ L A
Sbjct: 108 PG-PFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEK---DL---FSFYLSGGGA 160
Query: 256 S-STLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVE 314
+ S + G VD S S ++ A Y L+ I V+ T A +
Sbjct: 161 NGSEVMLGGVDNSHY-TGSIHWIPVTAEKYWQVALDGITVN---------GQTAACEGCQ 210
Query: 315 RGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDY 374
I+D+G++ + +++ A + ++ +
Sbjct: 211 -----AIVDTGTSKIVAPVSALANIMKDIGASENQGEMMG------------NCASVQSL 253
Query: 375 PSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDD-------RLTIIGAYHQQNVLV 427
P +T G PLP YI G++ FC + L L I G +N
Sbjct: 254 PDITFTINGVKQPLPPS-AYI---EGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYT 309
Query: 428 IYDVGNNRLQFAPVV 442
IYD NN++ FAP
Sbjct: 310 IYDRTNNKVGFAPAA 324
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
pdb|2QZW|B Chain B, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
Length = 341
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 149/391 (38%), Gaps = 99/391 (25%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINC----------FPQT 135
IP+T+N + Y +I IG + ++VDT S +W + C F +
Sbjct: 3 IPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVP-DASVTCDKPRPGQSADFCKG 61
Query: 136 FPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFP 195
IY P+ S T L P Y +G+S++G +D F
Sbjct: 62 KGIYTPKSSTTSQNLGT--PFYIG----------------YGDGSSSQGTLYKDTVGFGG 103
Query: 196 DSIPEFLVFGCSDDNQGFPFGPDNRIS---GILGLSMS-----------PLSLISQIGGD 241
SI + + F + S GILG+ P++L +Q G
Sbjct: 104 ASITKQV------------FADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQ-GVI 150
Query: 242 INHKFSYCLVYP-LASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHR 300
+ +S L P A+ + FG VD + Y +LI V + + R
Sbjct: 151 AKNAYSLYLNSPNAATGQIIFGGVDK------------------AKYSGSLIAVPVTSDR 192
Query: 301 MMFPPNTFAIRDVERGLGGCI---MDSGSAFTSMERTPYRQVLEQFMAYFER------FH 351
+ +++ V + + G I +DSG+ T +++ + +++ F A + F+
Sbjct: 193 EL-RITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFY 251
Query: 352 LIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKY-FCVALLP 410
+ QT+ + NF + +++ +++ P Y G+ Y C LL
Sbjct: 252 VTDCQTSGTVDF------NFDNNAKISVP--ASEFTAPLSYA-----NGQPYPKCQLLLG 298
Query: 411 DDRLTIIGAYHQQNVLVIYDVGNNRLQFAPV 441
I+G ++ ++YD+ ++++ A V
Sbjct: 299 ISDANILGDNFLRSAYLVYDLDDDKISLAQV 329
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant,
Mvv
Length = 329
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPC--INCFPQTFPIYDPRQ 143
+P+T N ++ Y+ +I +G P +++DT S +W C + CF + YD
Sbjct: 5 VPLT-NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHS--KYDHEA 61
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIP-EFL 202
S++Y N EF+ +Y G S +G S+D +IP +
Sbjct: 62 SSSY---------KANGTEFAI---------QYGTG-SLEGYISQDTLSIGDLTIPKQDF 102
Query: 203 VFGCSDDNQGFPFGPDNRISGILGLSMSPLSL 234
S+ F FG + GILGL +S+
Sbjct: 103 AEATSEPGLTFAFG---KFDGILGLGYDTISV 131
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant
Inhibitor
pdb|1DPJ|A Chain A, The Structure Of Proteinase A Complexed With Ia3 Peptide
Inhibitor
pdb|1FMU|A Chain A, Structure Of Native Proteinase A In P3221 Space Group.
pdb|1FMX|A Chain A, Structure Of Native Proteinase A In The Space Group P21
pdb|1FMX|B Chain B, Structure Of Native Proteinase A In The Space Group P21
Length = 329
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPC--INCFPQTFPIYDPRQ 143
+P+T N ++ Y+ +I +G P +++DT S +W C + CF + YD
Sbjct: 5 VPLT-NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHS--KYDHEA 61
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIP-EFL 202
S++Y N EF+ +Y G S +G S+D +IP +
Sbjct: 62 SSSY---------KANGTEFAI---------QYGTG-SLEGYISQDTLSIGDLTIPKQDF 102
Query: 203 VFGCSDDNQGFPFGPDNRISGILGLSMSPLSL 234
S+ F FG + GILGL +S+
Sbjct: 103 AEATSEPGLTFAFG---KFDGILGLGYDTISV 131
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A
pdb|1FQ4|A Chain A, Crystal Structure Of A Complex Between Hydroxyethylene
Inhibitor Cp- 108,420 And Yeast Aspartic Proteinase A
pdb|1FQ5|A Chain A, X-Ray Struture Of A Cyclic Statine Inhibitor Pd-129,541
Bound To Yeast Proteinase A
pdb|1FQ6|A Chain A, X-Ray Structure Of Glycol Inhibitor Pd-133,450 Bound To
Saccharopepsin
pdb|1FQ7|A Chain A, X-Ray Structure Of Inhibitor Cp-72,647 Bound To
Saccharopepsin
pdb|1FQ8|A Chain A, X-Ray Structure Of Difluorostatine Inhibitor Cp81,198
Bound To Saccharopepsin
Length = 329
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 28/152 (18%)
Query: 86 IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPC--INCFPQTFPIYDPRQ 143
+P+T N ++ Y+ +I +G P +++DT S +W C + CF + YD
Sbjct: 5 VPLT-NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHS--KYDHEA 61
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIP-EFL 202
S++Y N EF+ +Y G S +G S+D +IP +
Sbjct: 62 SSSY---------KANGTEFAI---------QYGTG-SLEGYISQDTLSIGDLTIPKQDF 102
Query: 203 VFGCSDDNQGFPFGPDNRISGILGLSMSPLSL 234
S+ F FG + GILGL +S+
Sbjct: 103 AEATSEPGLTFAFG---KFDGILGLGYDTISV 131
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation,
Kinetic Characterization And X-Ray Analysis At
2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf
Chymosin
Length = 323
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 85 TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
++P+T N S YF I +G P + +L DT S W C + + +DPR+S
Sbjct: 5 SVPLT-NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKS 63
Query: 145 ATYGRL 150
+T+ L
Sbjct: 64 STFQNL 69
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972
pdb|1CMS|A Chain A, The Three-Dimensional Structure Of Recombinant Bovine
Chymosin At 2.3 Angstroms Resolution
pdb|4CMS|A Chain A, X-Ray Analyses Of Aspartic Proteinases Iv. Structure And
Refinement At 2.2 Angstroms Resolution Of Bovine
Chymosin
pdb|4AA8|A Chain A, Bovine Chymosin At 1.8a Resolution
Length = 323
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 85 TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
++P+T N S YF I +G P + +L DT S W C + + +DPR+S
Sbjct: 5 SVPLT-NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKS 63
Query: 145 ATYGRL 150
+T+ L
Sbjct: 64 STFQNL 69
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|B Chain B, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|C Chain C, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|D Chain D, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|E Chain E, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|F Chain F, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|G Chain G, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|H Chain H, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3TNE|A Chain A, The Crystal Structure Of Protease Sapp1p From Candida
Parapsilosis In Complex With The Hiv Protease Inhibitor
Ritonavir
pdb|3TNE|B Chain B, The Crystal Structure Of Protease Sapp1p From Candida
Parapsilosis In Complex With The Hiv Protease Inhibitor
Ritonavir
Length = 339
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 25/111 (22%)
Query: 84 DTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIW-----TQCQPCINCFPQTFPI 138
D+I +++ + Y + +G Q+ +++DT S W QC ++C ++
Sbjct: 1 DSISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDC--KSSGT 58
Query: 139 YDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASED 189
+ P S++Y L + RY +G++++G +D
Sbjct: 59 FTPSSSSSYKNLG------------------AAFTIRYGDGSTSQGTWGKD 91
>pdb|2BJU|A Chain A, Plasmepsin Ii Complexed With A Highly Active Achiral
Inhibitor
Length = 453
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 25/185 (13%)
Query: 54 KFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPL- 112
K H L K ++L S T + + + +D I + ++ Q+ +++ + +G Q+P
Sbjct: 98 KTHKLKNYIKESVNFLNSGLTKTNYLGSSNDNIEL-VDFQNIMFYGDAEVGD--NQQPFT 154
Query: 113 -LVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCV 171
++DT S +W C T +YD +S TY + D
Sbjct: 155 FILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEK------------------DGTK 196
Query: 172 YDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSP 231
+ Y +G + G S+DL S+P + D N P + GILGL
Sbjct: 197 VEMNYVSG-TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKD 254
Query: 232 LSLIS 236
LS+ S
Sbjct: 255 LSIGS 259
>pdb|1PFZ|A Chain A, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|B Chain B, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|C Chain C, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|D Chain D, Proplasmepsin Ii From Plasmodium Falciparum
Length = 380
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 51 ESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQE 110
++ K H L K ++L S T + + + +D I + ++ Q+ +++ + +G Q+
Sbjct: 22 KTIKTHKLKNYIKESVNFLNSGLTKTNYLGSSNDNIEL-VDFQNIMFYGDAEVGD--NQQ 78
Query: 111 PL--LVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVND 168
P ++DT S +W C T +YD +S TY + D
Sbjct: 79 PFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEK------------------D 120
Query: 169 VCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLS 228
+ Y +G + G S+DL S+P + D N P + GILGL
Sbjct: 121 GTKVEMNYVSG-TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLG 178
Query: 229 MSPLSLIS 236
LS+ S
Sbjct: 179 WKDLSIGS 186
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGR 149
YF I IG P ++ DT S +W C + +T + P QS+TY +
Sbjct: 25 YFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQ 77
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 144/377 (38%), Gaps = 67/377 (17%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 5 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 61
Query: 137 PIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPD 196
++D S++Y N E + RY+ G + G S+D+
Sbjct: 62 KLFDASDSSSYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGI 102
Query: 197 SIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYP-LA 255
++ + +FG + PF G++G + I Q G + F + L
Sbjct: 103 TVTQ--MFGEVTEMPALPF-MLAEFDGVVG-----MGFIEQAIGRVTPIFDNIISQGVLK 154
Query: 256 SSTLTF-GDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---FPPNTFAIR 311
+F + D+ G I H G + +Y+NLI + +M +T
Sbjct: 155 EDVFSFYYNRDSLGGQIVLGGSDPQHYEG-NFHYINLIKTGVWQIQMKGVSVGSSTLLCE 213
Query: 312 DVERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDP 369
D GC ++D+G+++ S + +++E A F + V+ G L
Sbjct: 214 D------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGPTL------ 260
Query: 370 NFTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRLTIIGAYHQ 422
P ++ H G ++ L +YV+ + + +K +A+ P +GA
Sbjct: 261 -----PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFI 315
Query: 423 QNVLVIYDVGNNRLQFA 439
+ +D NNR+ FA
Sbjct: 316 RKFYTEFDRRNNRIGFA 332
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 142/376 (37%), Gaps = 73/376 (19%)
Query: 88 ITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF--PIYDPRQSA 145
I N + Y+ IGIG P ++ DT S +W C + ++D S+
Sbjct: 54 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSS 113
Query: 146 TYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFG 205
+Y N E + RY+ G + G S+D+ ++ + +FG
Sbjct: 114 SYK---------HNGTELTL---------RYSTG-TVSGFLSQDIITVGGITVTQ--MFG 152
Query: 206 CSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKFSYCLVYPLA 255
+ PF G++G+ ++P+ ++ISQ G FS+
Sbjct: 153 EVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDSE 210
Query: 256 SSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---FPPNTFAIRD 312
+S G + G Q H G + +Y+NLI + +M +T D
Sbjct: 211 NSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSVGSSTLLCED 262
Query: 313 VERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPN 370
GC ++D+G+++ S + +++E A F + V+ G L
Sbjct: 263 ------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGPTL------- 308
Query: 371 FTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRLTIIGAYHQQ 423
P ++ H G ++ L +YV+ + + +K +A+ P +GA +
Sbjct: 309 ----PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIR 364
Query: 424 NVLVIYDVGNNRLQFA 439
+D NNR+ FA
Sbjct: 365 KFYTEFDRRNNRIGFA 380
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 149/385 (38%), Gaps = 78/385 (20%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 1 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 57
Query: 137 PIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPD 196
++D S++Y N E + RY+ G + G S+D+
Sbjct: 58 KLFDASDSSSYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGI 98
Query: 197 SIPEFLVFGCSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKF 246
++ + +FG + PF G++G+ ++P+ ++ISQ G F
Sbjct: 99 TVTQ--MFGEVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVF 154
Query: 247 SYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---F 303
S+ +S G + G Q H G + +Y+NLI + +M
Sbjct: 155 SFYYNRDSENSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSV 206
Query: 304 PPNTFAIRDVERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGF 361
+T D GC ++D+G+++ S + +++E A F + V+ G
Sbjct: 207 GSSTLLCED------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGP 259
Query: 362 ELCYRQDPNFTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRL 414
L P ++ H G ++ L +YV+ + + +K +A+ P
Sbjct: 260 TL-----------PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPT 308
Query: 415 TIIGAYHQQNVLVIYDVGNNRLQFA 439
+GA + +D NNR+ FA
Sbjct: 309 WALGATFIRKFYTEFDRRNNRIGFA 333
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 149/385 (38%), Gaps = 78/385 (20%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 5 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 61
Query: 137 PIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPD 196
++D S++Y N E + RY+ G + G S+D+
Sbjct: 62 KLFDASDSSSYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGI 102
Query: 197 SIPEFLVFGCSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKF 246
++ + +FG + PF G++G+ ++P+ ++ISQ G F
Sbjct: 103 TVTQ--MFGEVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVF 158
Query: 247 SYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---F 303
S+ +S G + G Q H G + +Y+NLI + +M
Sbjct: 159 SFYYNRDSENSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSV 210
Query: 304 PPNTFAIRDVERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGF 361
+T D GC ++D+G+++ S + +++E A F + V+ G
Sbjct: 211 GSSTLLCED------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGP 263
Query: 362 ELCYRQDPNFTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRL 414
L P ++ H G ++ L +YV+ + + +K +A+ P
Sbjct: 264 TL-----------PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPT 312
Query: 415 TIIGAYHQQNVLVIYDVGNNRLQFA 439
+GA + +D NNR+ FA
Sbjct: 313 WALGATFIRKFYTEFDRRNNRIGFA 337
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 149/385 (38%), Gaps = 78/385 (20%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 2 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 58
Query: 137 PIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPD 196
++D S++Y N E + RY+ G + G S+D+
Sbjct: 59 KLFDASDSSSYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGI 99
Query: 197 SIPEFLVFGCSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKF 246
++ + +FG + PF G++G+ ++P+ ++ISQ G F
Sbjct: 100 TVTQ--MFGEVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVF 155
Query: 247 SYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---F 303
S+ +S G + G Q H G + +Y+NLI + +M
Sbjct: 156 SFYYNRDSENSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSV 207
Query: 304 PPNTFAIRDVERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGF 361
+T D GC ++D+G+++ S + +++E A F + V+ G
Sbjct: 208 GSSTLLCED------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGP 260
Query: 362 ELCYRQDPNFTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRL 414
L P ++ H G ++ L +YV+ + + +K +A+ P
Sbjct: 261 TL-----------PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPT 309
Query: 415 TIIGAYHQQNVLVIYDVGNNRLQFA 439
+GA + +D NNR+ FA
Sbjct: 310 WALGATFIRKFYTEFDRRNNRIGFA 334
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 149/385 (38%), Gaps = 78/385 (20%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 5 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 61
Query: 137 PIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPD 196
++D S++Y N E + RY+ G + G S+D+
Sbjct: 62 KLFDASDSSSYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGI 102
Query: 197 SIPEFLVFGCSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKF 246
++ + +FG + PF G++G+ ++P+ ++ISQ G F
Sbjct: 103 TVTQ--MFGEVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVF 158
Query: 247 SYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---F 303
S+ +S G + G Q H G + +Y+NLI + +M
Sbjct: 159 SFYYNRDSENSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSV 210
Query: 304 PPNTFAIRDVERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGF 361
+T D GC ++D+G+++ S + +++E A F + V+ G
Sbjct: 211 GSSTLLCED------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGP 263
Query: 362 ELCYRQDPNFTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRL 414
L P ++ H G ++ L +YV+ + + +K +A+ P
Sbjct: 264 TL-----------PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPT 312
Query: 415 TIIGAYHQQNVLVIYDVGNNRLQFA 439
+GA + +D NNR+ FA
Sbjct: 313 WALGATFIRKFYTEFDRRNNRIGFA 337
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|B Chain B, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|C Chain C, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase
Length = 478
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 90 MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPC---INCFPQTFPIYDPRQSAT 146
MN Q YF IG+G P + ++ DT S +W C I C+ + Y S+T
Sbjct: 50 MNAQ---YFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSR--YKAGASST 104
Query: 147 YGR 149
Y +
Sbjct: 105 YKK 107
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
Length = 333
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 142/376 (37%), Gaps = 73/376 (19%)
Query: 88 ITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF--PIYDPRQSA 145
I N + Y+ IGIG P ++ DT S +W C + ++D S+
Sbjct: 4 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSS 63
Query: 146 TYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFG 205
+Y N E + RY+ G + G S+D+ ++ + +FG
Sbjct: 64 SYKH---------NGTELTL---------RYSTG-TVSGFLSQDIITVGGITVTQ--MFG 102
Query: 206 CSDDNQGFPFGPDNRISGILGLS--------MSPL--SLISQIGGDINHKFSYCLVYPLA 255
+ PF G++G+ ++P+ ++ISQ G FS+
Sbjct: 103 EVTEMPALPF-MLAEFDGVVGMGFIEQAIGRVTPIFDNIISQ-GVLKEDVFSFYYNRDSE 160
Query: 256 SSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMM---FPPNTFAIRD 312
+S G + G Q H G + +Y+NLI + +M +T D
Sbjct: 161 NSQSLGGQIVLGGSDPQ-------HYEG-NFHYINLIKTGVWQIQMKGVSVGSSTLLCED 212
Query: 313 VERGLGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPN 370
GC ++D+G+++ S + +++E A F + V+ G L
Sbjct: 213 ------GCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYV-VKCNEGPTL------- 258
Query: 371 FTDYPSMTLHFQGADWPL-PKEYVYIFNTAGEKYFCVALL------PDDRLTIIGAYHQQ 423
P ++ H G ++ L +YV+ + + +K +A+ P +GA +
Sbjct: 259 ----PDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIR 314
Query: 424 NVLVIYDVGNNRLQFA 439
+D NNR+ FA
Sbjct: 315 KFYTEFDRRNNRIGFA 330
>pdb|1MIQ|A Chain A, Crystal Structure Of Proplasmepsin From The Human Malarial
Pathogen Plasmodium Vivax
pdb|1MIQ|B Chain B, Crystal Structure Of Proplasmepsin From The Human Malarial
Pathogen Plasmodium Vivax
Length = 375
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 22/126 (17%)
Query: 112 LLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCV 171
L+ DT S +W + C + +YD +S +Y + D
Sbjct: 79 LIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEK------------------DGTK 120
Query: 172 YDERYANGASTKGIASEDLFFFFPDSIP-EFLVFGCSDDNQGFPFGPDNRISGILGLSMS 230
D Y +G + KG S+DL S+P +F+ +DD + P GILGL
Sbjct: 121 VDITYGSG-TVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLE--PIYSSVEFDGILGLGWK 177
Query: 231 PLSLIS 236
LS+ S
Sbjct: 178 DLSIGS 183
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 106 PITQEPLLVDTASDLIWTQCQPCINCFPQTFP 137
P++Q L + DLIWT Q C FPQ+ P
Sbjct: 568 PLSQ---LCENEMDLIWTLRQDCRENFPQSLP 596
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution
Length = 326
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATY 147
YF IGIG P ++ DT S +W C + ++P S+TY
Sbjct: 14 YFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNPEDSSTY 64
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|1QRP|E Chain E, Human Pepsin 3a In Complex With A Phosphonate Inhibitor
Iva-Val-Val- Leu(P)-(O)phe-Ala-Ala-Ome
pdb|1PSN|A Chain A, The Crystal Structure Of Human Pepsin And Its Complex With
Pepstatin
pdb|3UTL|A Chain A, Human Pepsin 3b
Length = 326
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATY 147
YF IGIG P ++ DT S +W C + ++P S+TY
Sbjct: 14 YFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNPEDSSTY 64
>pdb|2ANL|A Chain A, X-Ray Crystal Structure Of The Aspartic Protease
Plasmepsin 4 From The Malarial Parasite Plasmodium
Malariae Bound To An Allophenylnorstatine Based
Inhibitor
pdb|2ANL|B Chain B, X-Ray Crystal Structure Of The Aspartic Protease
Plasmepsin 4 From The Malarial Parasite Plasmodium
Malariae Bound To An Allophenylnorstatine Based
Inhibitor
Length = 327
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 88 ITMNTQSSLYFVNIG-IGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSAT 146
I ++ ++L F G +G + L+ DT S +W + C + T +YD +S +
Sbjct: 6 IELDDVANLMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSIGCSTKHLYDSSKSKS 65
Query: 147 YGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIP-EFLVFG 205
Y + D + Y +G + +G S+DL S+P +F+
Sbjct: 66 YEK------------------DGTKVEITYGSG-TVRGFFSKDLVTLGYLSLPYKFIEVT 106
Query: 206 CSDDNQGFPFGPDNRISGILGLSMSPLSLIS 236
+DD + P GILGL LS+ S
Sbjct: 107 DTDDLE--PLYTAAEFDGILGLGWKDLSIGS 135
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 81 NPSDTIPIT--MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF-- 136
N + ++ +T M+TQ Y+ IGIG P ++ DT S +W C +
Sbjct: 5 NTTSSVILTNYMDTQ---YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH 61
Query: 137 PIYDPRQSATY 147
++D S++Y
Sbjct: 62 KLFDASDSSSY 72
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And
Refinement At 2.0 Angstroms Resolution Of The Aspartic
Proteinase From Mucor Pusillus
Length = 361
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCIN---CFPQTFPIYDPRQSATYGRLPCN 153
Y + + IG P LL DT S W + C N C + F +DP S+T+ N
Sbjct: 20 YAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRF--FDPSSSSTFKETDYN 77
>pdb|1QS8|A Chain A, Crystal Structure Of The P. Vivax Aspartic Proteinase
Plasmepsin Complexed With The Inhibitor Pepstatin A
pdb|1QS8|B Chain B, Crystal Structure Of The P. Vivax Aspartic Proteinase
Plasmepsin Complexed With The Inhibitor Pepstatin A
Length = 329
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 22/126 (17%)
Query: 112 LLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCV 171
L+ DT S +W + C + +YD +S +Y + D
Sbjct: 33 LIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEK------------------DGTK 74
Query: 172 YDERYANGASTKGIASEDLFFFFPDSIP-EFLVFGCSDDNQGFPFGPDNRISGILGLSMS 230
D Y +G + KG S+DL S+P +F+ +DD + P GILGL
Sbjct: 75 VDITYGSG-TVKGFFSKDLVTLGHLSMPYKFIEVIDTDDLE--PIYSSVEFDGILGLGWK 131
Query: 231 PLSLIS 236
LS+ S
Sbjct: 132 DLSIGS 137
>pdb|3QRV|A Chain A, Crystal Structure Of Plasmepsin I (Pmi) From Plasmodium
Falciparum
pdb|3QRV|B Chain B, Crystal Structure Of Plasmepsin I (Pmi) From Plasmodium
Falciparum
pdb|3QS1|A Chain A, Crystal Structure Of Kni-10006 Complex Of Plasmepsin I
(Pmi) From Plasmodium Falciparum
pdb|3QS1|B Chain B, Crystal Structure Of Kni-10006 Complex Of Plasmepsin I
(Pmi) From Plasmodium Falciparum
pdb|3QS1|C Chain C, Crystal Structure Of Kni-10006 Complex Of Plasmepsin I
(Pmi) From Plasmodium Falciparum
pdb|3QS1|D Chain D, Crystal Structure Of Kni-10006 Complex Of Plasmepsin I
(Pmi) From Plasmodium Falciparum
Length = 336
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 21/156 (13%)
Query: 81 NPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYD 140
N D++ + + + +Y+ IG + + DT S +W C +T +YD
Sbjct: 8 NAGDSVTLN-DVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCNTIGCKTKNLYD 66
Query: 141 PRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPE 200
+S TY + D + Y +G + G S+D+ S P
Sbjct: 67 SNKSKTYEK------------------DGTKVEMNYVSG-TVSGFFSKDIVTIANLSFP- 106
Query: 201 FLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLIS 236
+ +D N P + GI+GL LS+ S
Sbjct: 107 YKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGS 142
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|C Chain C, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|E Chain E, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|G Chain G, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
Length = 335
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 135/372 (36%), Gaps = 67/372 (18%)
Query: 88 ITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQ--TFPIYDPRQSA 145
+ N +S Y+ IGIG P ++ DT S +W C + +Y+ S+
Sbjct: 8 VLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSS 67
Query: 146 TYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFG 205
+Y EN +F+ Y +G KG S+D ++ + FG
Sbjct: 68 SY---------MENGDDFTI---------HYGSG-RVKGFLSQDSVTVGGITVTQ--TFG 106
Query: 206 CSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCL-------VYPLASST 258
PF + G+LG+ P + + +H S + VY
Sbjct: 107 EVTQLPLIPF-MLAQFDGVLGMGF-PAQAVGGVTPVFDHILSQGVLKEKVFSVYYNRGPH 164
Query: 259 LTFGDVDTSGLPIQ--STPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERG 316
L G+V G Q F ++ + + VS+G+ ++
Sbjct: 165 LLGGEVVLGGSDPQHYQGDFHYVSLSKTDSWQITMKGVSVGSSTLLCEE----------- 213
Query: 317 LGGC--IMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDY 374
GC ++D+GS+F S + + +++ A +R H V + Q P
Sbjct: 214 --GCEVVVDTGSSFISAPTSSLKLIMQALGAKEKRLHEYVVSCS--------QVPTL--- 260
Query: 375 PSMTLHFQGADWPLPK-EYVYIFNTAGEKYFCVALL------PDDRLTIIGAYHQQNVLV 427
P ++ + G + L +YV + +K VAL P + ++GA +
Sbjct: 261 PDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYT 320
Query: 428 IYDVGNNRLQFA 439
+D NNR+ FA
Sbjct: 321 EFDRHNNRIGFA 332
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms
Resolution
Length = 370
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATY 147
YF IGIG P ++ DT S +W C + ++P S+T+
Sbjct: 58 YFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTF 108
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine
Pepsinogen
Length = 370
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 97 YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATY 147
YF IGIG P ++ DT S +W C + ++P S+T+
Sbjct: 58 YFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTF 108
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,749,899
Number of Sequences: 62578
Number of extensions: 592239
Number of successful extensions: 1215
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1160
Number of HSP's gapped (non-prelim): 78
length of query: 447
length of database: 14,973,337
effective HSP length: 102
effective length of query: 345
effective length of database: 8,590,381
effective search space: 2963681445
effective search space used: 2963681445
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)