BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046677
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04088|POF21_ARATH Probable transcription factor PosF21 OS=Arabidopsis thaliana
GN=POSF21 PE=2 SV=1
Length = 398
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
Query: 2 CHRIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVL 61
RI ANR SA R+KERK YI+ LE K+ L++ +TTL+AQLTLL+ ++N L E L
Sbjct: 205 AKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVENNEL 264
Query: 62 KHRLEITLQKIHLQDSLNDQIRSEIQHMKTVLGEKIP---NLGALFG 105
K RL+ Q++HLQD LN+ ++ EIQH+K + G+ P N G+ FG
Sbjct: 265 KLRLQTMEQQVHLQDELNEALKEEIQHLKVLTGQVAPSALNYGS-FG 310
>sp|Q69IL4|RF2A_ORYSJ Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a
PE=1 SV=1
Length = 380
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 65/94 (69%)
Query: 2 CHRIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVL 61
RI ANR SA R+KERK YI LE K+ L++ +TTL+AQL LL+ +++ L E + L
Sbjct: 185 AKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTTENSEL 244
Query: 62 KHRLEITLQKIHLQDSLNDQIRSEIQHMKTVLGE 95
K RL+ Q++HLQD+LND ++SE+Q +K G+
Sbjct: 245 KLRLQTMEQQVHLQDALNDTLKSEVQRLKVATGQ 278
>sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b
PE=1 SV=1
Length = 329
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%)
Query: 2 CHRIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVL 61
RI+ANR SA R+KERK YI LE K+ L++ +TTL+AQLTL + ++ L AE A L
Sbjct: 136 AKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAEL 195
Query: 62 KHRLEITLQKIHLQDSLNDQIRSEIQHMKTVLGE 95
K RL+ Q+ L+D+LND ++ E++ +K GE
Sbjct: 196 KIRLQAMEQQAQLRDALNDALKQELERLKLATGE 229
>sp|Q9MA75|VIP1_ARATH Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1
Length = 341
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 2 CHRIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVL 61
RI+ANR SA R+KERK Y LE K+ L++ +TTL+AQ+T+L+ ++ L+ E L
Sbjct: 198 AKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTENKHL 257
Query: 62 KHRLEITLQKIHLQDSLNDQIRSEIQHMKTVLGEKIP 98
K RL+ Q+ L+D+LN+ +R E+ +K V GE IP
Sbjct: 258 KMRLQALEQQAELRDALNEALRDELNRLKVVAGE-IP 293
>sp|Q8W191|HYH_ARATH Transcription factor HY5-like OS=Arabidopsis thaliana GN=HYH PE=1
SV=1
Length = 149
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSL 54
R++ NR+SA +A+ERKK+Y+ LE + + L++N+ L +++ L E+ L
Sbjct: 84 RLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTML 134
>sp|O24646|HY5_ARATH Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1
Length = 168
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETE 50
R++ NR+SA +A+ERKK Y+ LE+++ +L + ++ L +L+ L+ E
Sbjct: 94 RLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNE 140
>sp|Q9FUD3|BZIP9_ARATH Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1
Length = 277
Score = 37.0 bits (84), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVLKH 63
R+ +NR SA R++ RK+ Y+ LE ++ +L+ +++TL QL + S VLK
Sbjct: 126 RMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKS 185
Query: 64 RLEITLQKIHLQDSL 78
+E K+ L + L
Sbjct: 186 DVETLRVKVKLAEDL 200
>sp|Q54RZ9|BZPG_DICDI Probable basic-leucine zipper transcription factor G
OS=Dictyostelium discoideum GN=bzpG PE=3 SV=1
Length = 372
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETESNSLDAE 57
R++ NR SA +++RK+ + LEH++ L SNS + L+ LE E+ L AE
Sbjct: 283 RLIKNRESAHLSRQRKRERLTDLEHRVEELSSNSIDINKTLSSLENENLILKAE 336
>sp|Q9SM50|HY5_SOLLC Transcription factor HY5 OS=Solanum lycopersicum GN=HY5 PE=2 SV=1
Length = 158
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETE 50
R++ NR+SA +A+ERKK Y+ LE ++ L + + L +L+ L+ E
Sbjct: 92 RLLRNRVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTLQNE 138
>sp|Q5R9C9|ATF7_PONAB Cyclic AMP-dependent transcription factor ATF-7 OS=Pongo abelii
GN=ATF7 PE=2 SV=1
Length = 483
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 8 NRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQLTLLETE 50
NR +A R ++++KL++ LE K L S + L+ ++TLL E
Sbjct: 342 NRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNE 384
>sp|Q54Q90|BZPL_DICDI Probable basic-leucine zipper transcription factor L
OS=Dictyostelium discoideum GN=bzpL PE=3 SV=1
Length = 530
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTLTAQL-----TLLETESNSLDAEK 58
R++ NR SA ++ RKK YI LE K L ++ L Q T ET+S EK
Sbjct: 61 RLLKNRQSAALSRSRKKEYIANLESKAQELTHSTQELHVQYNKISSTTFETKSRLEFLEK 120
Query: 59 AVLKHRLEITLQKIHLQDSLNDQIR 83
++ R+E + +D N+ I+
Sbjct: 121 SLRSLRMENEFLRTKFEDINNNNIK 145
>sp|Q86AF3|BZPH_DICDI Probable basic-leucine zipper transcription factor H
OS=Dictyostelium discoideum GN=bzpH PE=3 SV=1
Length = 509
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 4 RIVANRMSAIRAKERKKLYIYMLEHKMHNLRSNSTTL---TAQLTLLETE 50
R + NR SA + +ERKK Y+ LE + NL S+ L T QL +L+ E
Sbjct: 56 RQMQNRQSAAQYRERKKEYLEKLETIVDNLESDRNQLLQQTKQLGMLQNE 105
>sp|Q5U3A8|PPR21_DANRE Protein phosphatase 1 regulatory subunit 21 OS=Danio rerio
GN=ppp1r21 PE=2 SV=1
Length = 665
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 28 HKMHNLRSNSTTLTAQLTLLETESNSLDAEKAVLKHRLEITLQKIHLQDSLNDQIRSEIQ 87
H +H L+ + TL +L LE E+ + R E Q++ S ++ S+++
Sbjct: 165 HTIHTLQEDKATLEVKLQTLEREARDC-------RVRTEECQQQLRKYQS---EVSSQLK 214
Query: 88 HMKTVLGEKIPNLGALFGLSRKSSYQDMNAP 118
H +V+ EK+P F ++ S Y +N P
Sbjct: 215 HSSSVIQEKVP-----FNDTQLSDYNSLNVP 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,470,378
Number of Sequences: 539616
Number of extensions: 2702205
Number of successful extensions: 18841
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 12025
Number of HSP's gapped (non-prelim): 3420
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)