BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046678
(74 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255542406|ref|XP_002512266.1| conserved hypothetical protein [Ricinus communis]
gi|223548227|gb|EEF49718.1| conserved hypothetical protein [Ricinus communis]
Length = 74
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 1 MAKFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHK 60
M KFT L+ +L SD + + A A C K W C G+++C DC+ Y G G CD +
Sbjct: 1 MVKFTTFFLLVLLILASDEEVVMRAGARDCHKVWNCKGNNRCWDDCKNKYNGMGLCDLYA 60
Query: 61 AIPPEKYCFCQYNC 74
A K CFC Y C
Sbjct: 61 APAVPKQCFCAYKC 74
>gi|79313119|ref|NP_001030639.1| putative defensin-like protein 184 [Arabidopsis thaliana]
gi|46396209|sp|P82732.1|DF184_ARATH RecName: Full=Putative defensin-like protein 184; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 18; Short=Protein LCR18; Flags: Precursor
gi|332640642|gb|AEE74163.1| putative defensin-like protein 184 [Arabidopsis thaliana]
Length = 76
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 2 AKFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKA 61
+ V ++ FL+ S GN + +A C++ W C G+D+C+ C + G G CD + A
Sbjct: 4 SSILFVLIIVVFLISSSGNKKMVGEAKKCDQTWTCEGEDKCREKCLTLHNGVGVCDLYTA 63
Query: 62 IPPEKYCFCQYNC 74
K CFC Y+C
Sbjct: 64 PLVPKQCFCHYDC 76
>gi|224125500|ref|XP_002319602.1| predicted protein [Populus trichocarpa]
gi|222857978|gb|EEE95525.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 9 FLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIPPEKYC 68
+ + ++D + L A C K W C G ++C DC+ Y GTG CD + A P K C
Sbjct: 6 IIYLYFCLADEKLVLMVGARDCHKVWTCKGQNRCWEDCKNRYSGTGLCDLYTAPPVPKQC 65
Query: 69 FCQYNC 74
FC Y C
Sbjct: 66 FCAYKC 71
>gi|297833196|ref|XP_002884480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330320|gb|EFH60739.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 FTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIP 63
F ++ L +F + + M +A CEK W C G+D+C+ C+ Y G G CD + A
Sbjct: 8 FVLIVVLFSFNCLRNKKMV--GEAKKCEKTWNCEGEDKCREKCKTLYNGDGICDLYTAPL 65
Query: 64 PEKYCFCQYNC 74
K CFC Y+C
Sbjct: 66 VPKQCFCHYDC 76
>gi|79313331|ref|NP_001030745.1| putative defensin-like protein 187 [Arabidopsis thaliana]
gi|46396229|sp|P82757.1|DF187_ARATH RecName: Full=Putative defensin-like protein 187; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 42; Short=Protein LCR42; Flags: Precursor
gi|332643205|gb|AEE76726.1| putative defensin-like protein 187 [Arabidopsis thaliana]
Length = 77
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 9 FLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIPPEK-- 66
++ FL+ S N + +A C+ WAC G+D CK C YKG G + PPE
Sbjct: 10 LIVVFLISSSENQKMVGEAKQCKTGWACFGEDACKEKCMAKYKGVGTVTYF-PFPPETII 68
Query: 67 -YCFCQYNC 74
YC C Y+C
Sbjct: 69 IYCECLYDC 77
>gi|297835342|ref|XP_002885553.1| low-molecular-weight cysteine-rich 42 [Arabidopsis lyrata subsp.
lyrata]
gi|297331393|gb|EFH61812.1| low-molecular-weight cysteine-rich 42 [Arabidopsis lyrata subsp.
lyrata]
Length = 77
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 9 FLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIPPEKY- 67
++ F++ S N + +A C+ WAC+G+D CK C Y G G + + PPE
Sbjct: 10 LIVVFVISSSENQKMVGEAKKCKAGWACSGEDICKEKCMAKYNGVGTVTYF-SFPPETIT 68
Query: 68 --CFCQYNC 74
C C Y+C
Sbjct: 69 ILCDCVYDC 77
>gi|79312827|ref|NP_001030638.1| putative defensin-like protein 188 [Arabidopsis thaliana]
gi|46396228|sp|P82756.1|DF188_ARATH RecName: Full=Putative defensin-like protein 188; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 41; Short=Protein LCR41; Flags: Precursor
gi|332640641|gb|AEE74162.1| putative defensin-like protein 188 [Arabidopsis thaliana]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 9 FLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIPPEK-- 66
++ F++ S N + +A C W C GD++CK C +YKG G C + PP K
Sbjct: 10 LIVVFVISSSENGIMIGEAKKCSNSWICEGDEKCKEKCMADYKGNGTCYYPS--PPSKQH 67
Query: 67 ------YCFCQYNC 74
C+C ++C
Sbjct: 68 PEFFYPTCWCGFDC 81
>gi|255577914|ref|XP_002529829.1| conserved hypothetical protein [Ricinus communis]
gi|223530657|gb|EEF32530.1| conserved hypothetical protein [Ricinus communis]
Length = 73
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 1 MAKFTIVCFLLA--FLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNY-KGTGWCD 57
MAK + CFLL FL + G + + C W C CK +C KNY +G G C
Sbjct: 1 MAKLSSSCFLLVLIFLAAAQGGLSQAGEPGKCVTSWDCKDSKSCKDECNKNYPQGYGLC- 59
Query: 58 FHKAIPPEKYCFCQYNC 74
+ K C C YNC
Sbjct: 60 ----VGNPKTCLCSYNC 72
>gi|297833194|ref|XP_002884479.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330319|gb|EFH60738.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 79
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 3 KFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAI 62
K + + F+L ++ S N + +A C W C GD++CK C +YKG G C +
Sbjct: 2 KNSSLLFILIVVISSSENGKMIGEAKKCSNSWICEGDEKCKEKCMADYKGNGTCYYPS-- 59
Query: 63 PPEK 66
PP K
Sbjct: 60 PPSK 63
>gi|79322343|ref|NP_001031356.1| putative defensin-like protein 186 [Arabidopsis thaliana]
gi|46396227|sp|P82755.1|DF186_ARATH RecName: Full=Putative defensin-like protein 186; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 40; Short=Protein LCR40; Flags: Precursor
gi|330251258|gb|AEC06352.1| putative defensin-like protein 186 [Arabidopsis thaliana]
Length = 74
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 1 MAKFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHK 60
M +I+ L+ F +S +A TC W C G+D+CK +C +KG G C +
Sbjct: 1 MKNSSIILVLVFFFFISSS-----GEAKTCSDGWTCVGEDKCKVNCMAKHKGVGTCTLYI 55
Query: 61 ----AIPPEKY-CFCQYNC 74
P Y C C ++C
Sbjct: 56 IPSFPAPITSYICDCMFDC 74
>gi|79313333|ref|NP_001030746.1| putative defensin-like protein 185 [Arabidopsis thaliana]
gi|46396226|sp|P82754.1|DF185_ARATH RecName: Full=Putative defensin-like protein 185; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 39; Short=Protein LCR39; Flags: Precursor
gi|332643206|gb|AEE76727.1| putative defensin-like protein 185 [Arabidopsis thaliana]
Length = 77
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 1 MAKFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNG---DDQCKADCQKNYKGTGWCD 57
M +I+ L+ F ++S +A TC W C G +D+CK +C +KG G C+
Sbjct: 1 MKNSSILLLLVVFFVISSS-----GEAKTCSDGWTCLGPKEEDKCKENCMAKHKGVGTCN 55
Query: 58 FHKAIP----PEKY--CFCQYNC 74
+ IP P Y C C ++C
Sbjct: 56 LY-TIPEFPAPITYYMCDCMFDC 77
>gi|79322519|ref|NP_001031377.1| defensin-like protein 172 [Arabidopsis thaliana]
gi|46396246|sp|P82774.1|DF172_ARATH RecName: Full=Defensin-like protein 172; AltName:
Full=Low-molecular-weight cysteine-rich protein 60;
Short=Protein LCR60; Flags: Precursor
gi|330251887|gb|AEC06981.1| defensin-like protein 172 [Arabidopsis thaliana]
Length = 84
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 7 VCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNY--KGTGWCDFHKAIPP 64
+ FL+ F LV + NM A CEK D C A C+ + + G+CD+ + P
Sbjct: 12 IIFLVMFALV-EQNMGCTATMGPCEK------DKSCSATCRATFGDRANGFCDYSTSTSP 64
Query: 65 EKYCFCQYNC 74
C C Y+C
Sbjct: 65 GGECTCVYHC 74
>gi|297835344|ref|XP_002885554.1| hypothetical protein ARALYDRAFT_319035 [Arabidopsis lyrata subsp.
lyrata]
gi|297331394|gb|EFH61813.1| hypothetical protein ARALYDRAFT_319035 [Arabidopsis lyrata subsp.
lyrata]
Length = 75
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 5 TIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHK---- 60
TI+ L+ F +S + C W C G+D+CK C +KG G C+ +
Sbjct: 6 TILFVLVVFFFISSS-----GERKKCFDGWTCLGEDKCKVKCMAKHKGVGTCNLYTIPSF 60
Query: 61 AIPPEKY-CFCQYNC 74
P Y C C+++C
Sbjct: 61 PAPGASYICDCKFDC 75
>gi|1360108|emb|CAA62761.1| putative gamma-thionin protein [Picea abies]
Length = 83
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 9 FLLAFLLVSDGNMFLG-AQANTCE----KF-WACNGDDQCKADCQKNYKGTGWCDFHKAI 62
FLL L++S G M L A+ TC+ KF C + CK CQ +G CDFH A
Sbjct: 14 FLLVLLVISIGMMQLELAEGRTCKTPSGKFKGVCASSNNCKNVCQTEGFPSGSCDFHVA- 72
Query: 63 PPEKYCFCQYNC 74
+ C+C C
Sbjct: 73 --NRKCYCSKPC 82
>gi|116784600|gb|ABK23404.1| unknown [Picea sitchensis]
gi|116784882|gb|ABK23503.1| unknown [Picea sitchensis]
gi|148909582|gb|ABR17883.1| unknown [Picea sitchensis]
gi|224285158|gb|ACN40306.1| unknown [Picea sitchensis]
Length = 83
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 9 FLLAFLLVSDGNMFLG-AQANTCE----KF-WACNGDDQCKADCQKNYKGTGWCDFHKAI 62
FLL L++S G + L A+A TC+ KF C + CK CQ +G CDFH A
Sbjct: 14 FLLVLLVISIGMIQLELAEARTCKTPSGKFKGVCASSNNCKNVCQTEGFPSGSCDFHVA- 72
Query: 63 PPEKYCFCQYNC 74
+ C+C C
Sbjct: 73 --NRKCYCSKPC 82
>gi|116788953|gb|ABK25062.1| unknown [Picea sitchensis]
Length = 83
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 9 FLLAFLLVSDGNMFLG-AQANTCE----KF-WACNGDDQCKADCQKNYKGTGWCDFHKAI 62
FLL L++S G M L A+ TC+ KF C + CK CQ +G CDFH A
Sbjct: 14 FLLVLLVISIGMMQLELAEGRTCKTPSGKFKGVCASSNNCKNVCQTEGFPSGSCDFHVA- 72
Query: 63 PPEKYCFCQYNC 74
+ C+C C
Sbjct: 73 --NRKCYCSKPC 82
>gi|90411899|ref|ZP_01219907.1| hypothetical potassium channel protein [Photobacterium profundum
3TCK]
gi|90327157|gb|EAS43529.1| hypothetical potassium channel protein [Photobacterium profundum
3TCK]
Length = 263
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 21 MFLGAQANTCEKFWACNGDDQCKADCQKNYKGTGWCDFHKAIP---PEKY 67
+FLG C FW+ D C++ + NY T W DF +IP P +Y
Sbjct: 44 LFLGIDTFICLMFWSQLLTDLCRSKQKINYLKTHWLDFIASIPIIEPVRY 93
>gi|79322249|ref|NP_001031345.1| putative defensin-like protein 131 [Arabidopsis thaliana]
gi|254763272|sp|P82744.2|DF131_ARATH RecName: Full=Putative defensin-like protein 131; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 29; Short=Protein LCR29; Flags: Precursor
gi|330251053|gb|AEC06147.1| putative defensin-like protein 131 [Arabidopsis thaliana]
Length = 83
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 9 FLLAFLLVSDGNMFLGAQANTCEKFWA---CNGDDQCKADCQKNYKGTGWCDFHKAIPPE 65
+ + F V G + Q + C + C+ D C DC+ +KGTG C+ P
Sbjct: 16 YCICFKYVLLGMVVEKTQGHICHDYLEGDHCDPKD-CNLDCRDKWKGTGTCEPPTGTPLT 74
Query: 66 KYCFCQYNC 74
+ C+C Y+C
Sbjct: 75 RTCYCTYDC 83
>gi|297799060|ref|XP_002867414.1| low-molecular-weight cysteine-rich 27 [Arabidopsis lyrata subsp.
lyrata]
gi|297313250|gb|EFH43673.1| low-molecular-weight cysteine-rich 27 [Arabidopsis lyrata subsp.
lyrata]
Length = 77
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 1 MAKFTIVCFLLAFLLVSDGNMFLGAQANTCE----KFWACNGDDQCKADCQKNYKGTGWC 56
MAK + FL+ L++S M + C K AC+ D C+ C Y G G C
Sbjct: 1 MAKLSFSYFLVLMLVLSAFLMVERVEGKQCRLIIYKATACSLSD-CRLSCYTGYNGVGEC 59
Query: 57 DFHKAIPPEKYCFCQYNC 74
+P C C YNC
Sbjct: 60 FDDPNVPGPDNCGCLYNC 77
>gi|79325043|ref|NP_001031606.1| putative defensin-like protein 129 [Arabidopsis thaliana]
gi|46396205|sp|P82728.1|DF129_ARATH RecName: Full=Putative defensin-like protein 129; AltName:
Full=Putative low-molecular-weight cysteine-rich
protein 13; Short=Protein LCR13; Flags: Precursor
gi|332657399|gb|AEE82799.1| putative defensin-like protein 129 [Arabidopsis thaliana]
Length = 77
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 1 MAKFTIVCFLLAFLLVSDGNMFLGAQANTCEKFWACNG--DDQCKADCQKNYKGTG---W 55
M K T + + L++ + Q +TC ++ ++QC ++C +K G +
Sbjct: 1 MTKNTALTIFMVVLVIE--MVMEETQGDTCHEYLYPEKCENNQCNSECATKFKEVGVFGF 58
Query: 56 CDFHKAIPPEKYCFCQYNC 74
C ++ P E++C C YNC
Sbjct: 59 CVPPRSEPTEQFCICSYNC 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.330 0.141 0.524
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,201,238,366
Number of Sequences: 23463169
Number of extensions: 39012398
Number of successful extensions: 80910
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 80799
Number of HSP's gapped (non-prelim): 142
length of query: 74
length of database: 8,064,228,071
effective HSP length: 45
effective length of query: 29
effective length of database: 7,008,385,466
effective search space: 203243178514
effective search space used: 203243178514
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)