Query 046684
Match_columns 373
No_of_seqs 210 out of 2495
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 05:23:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 2.3E-35 7.8E-40 261.8 27.6 258 49-348 10-286 (306)
2 1zgk_A Kelch-like ECH-associat 100.0 1.7E-34 5.9E-39 256.3 26.8 255 50-347 24-300 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 4.1E-34 1.4E-38 253.2 28.0 249 50-341 15-283 (302)
4 2vpj_A Kelch-like protein 12; 100.0 1.5E-33 5.1E-38 249.5 26.5 254 50-346 14-290 (301)
5 4asc_A Kelch repeat and BTB do 100.0 3.9E-33 1.3E-37 248.4 28.4 253 52-346 6-289 (315)
6 2woz_A Kelch repeat and BTB do 100.0 8.7E-33 3E-37 246.5 27.8 247 51-340 16-293 (318)
7 2uvk_A YJHT; unknown function, 100.0 5.7E-30 1.9E-34 232.0 25.0 252 50-344 19-352 (357)
8 1zgk_A Kelch-like ECH-associat 100.0 1.3E-29 4.3E-34 224.9 21.3 247 20-292 39-302 (308)
9 4asc_A Kelch repeat and BTB do 100.0 8.8E-30 3E-34 226.7 19.8 255 24-317 17-304 (315)
10 2uvk_A YJHT; unknown function, 100.0 3.1E-29 1.1E-33 227.1 23.2 236 77-346 2-306 (357)
11 2xn4_A Kelch-like protein 2; s 100.0 9E-30 3.1E-34 225.3 19.1 243 21-291 31-291 (302)
12 2vpj_A Kelch-like protein 12; 100.0 2.9E-29 1E-33 221.8 22.2 246 21-292 32-293 (301)
13 3ii7_A Kelch-like protein 7; p 100.0 3.4E-29 1.2E-33 222.0 22.4 246 21-292 25-287 (306)
14 2woz_A Kelch repeat and BTB do 100.0 1.2E-28 4E-33 219.7 21.9 231 49-317 55-314 (318)
15 2zwa_A Leucine carboxyl methyl 99.9 7.5E-25 2.6E-29 214.0 22.6 217 81-341 385-642 (695)
16 2zwa_A Leucine carboxyl methyl 99.9 1.7E-24 5.7E-29 211.6 21.5 237 51-319 398-674 (695)
17 1k3i_A Galactose oxidase precu 99.9 5.6E-25 1.9E-29 214.6 17.5 284 27-346 173-509 (656)
18 1k3i_A Galactose oxidase precu 99.9 4.1E-22 1.4E-26 194.4 16.3 243 65-349 168-456 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.2 1.1E-08 3.9E-13 94.6 27.7 44 1-44 18-61 (445)
20 1fs1_A SKP2 F-BOX, cyclin A/CD 99.2 8.6E-12 3E-16 78.4 2.9 42 2-43 9-50 (53)
21 3v7d_B Cell division control p 99.1 1.3E-08 4.6E-13 94.5 21.3 37 2-38 15-51 (464)
22 1p22_A F-BOX/WD-repeat protein 99.1 4.1E-09 1.4E-13 97.3 17.1 42 2-43 11-56 (435)
23 2e31_A FBS1, F-box only protei 98.9 5.7E-10 2E-14 95.3 2.4 43 2-44 51-94 (297)
24 3dsm_A Uncharacterized protein 98.3 0.00048 1.6E-08 60.6 24.4 224 62-333 16-254 (328)
25 3dsm_A Uncharacterized protein 98.1 0.0024 8.1E-08 56.1 24.7 177 106-333 16-213 (328)
26 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0021 7.3E-08 57.5 23.9 219 63-340 63-304 (376)
27 3vgz_A Uncharacterized protein 98.1 0.0054 1.8E-07 53.9 26.3 222 62-333 68-304 (353)
28 3l2o_B F-box only protein 4; s 98.0 1.3E-06 4.5E-11 73.8 0.8 43 2-44 5-47 (312)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0022 7.4E-08 57.4 21.5 204 89-340 48-266 (376)
30 3hfq_A Uncharacterized protein 97.9 0.004 1.4E-07 54.8 22.0 255 63-344 18-282 (347)
31 2iwa_A Glutamine cyclotransfer 97.9 0.0042 1.4E-07 52.5 20.7 203 88-329 24-236 (266)
32 3mbr_X Glutamine cyclotransfer 97.9 0.004 1.4E-07 51.7 19.8 183 150-366 31-216 (243)
33 3nol_A Glutamine cyclotransfer 97.8 0.0028 9.7E-08 53.1 17.8 182 150-366 53-237 (262)
34 1l0q_A Surface layer protein; 97.8 0.002 6.8E-08 57.7 18.5 215 63-333 12-234 (391)
35 2ast_B S-phase kinase-associat 97.8 9E-06 3.1E-10 72.0 2.7 43 2-44 9-51 (336)
36 3bws_A Protein LP49; two-domai 97.7 0.0036 1.2E-07 56.9 19.4 220 64-333 102-335 (433)
37 3nol_A Glutamine cyclotransfer 97.7 0.011 3.6E-07 49.7 19.5 199 89-326 47-252 (262)
38 3nok_A Glutaminyl cyclase; bet 97.6 0.0053 1.8E-07 51.6 17.5 179 150-367 65-248 (268)
39 1l0q_A Surface layer protein; 97.6 0.0028 9.5E-08 56.8 16.9 215 63-333 54-276 (391)
40 1ri6_A Putative isomerase YBHE 97.6 0.0085 2.9E-07 52.2 19.3 153 170-345 151-321 (343)
41 3mbr_X Glutamine cyclotransfer 97.6 0.0017 5.9E-08 53.9 13.6 109 203-333 25-134 (243)
42 1rwi_B Serine/threonine-protei 97.5 0.019 6.7E-07 48.2 19.4 215 63-329 46-263 (270)
43 3vgz_A Uncharacterized protein 97.4 0.027 9.2E-07 49.3 20.5 205 93-333 51-263 (353)
44 3scy_A Hypothetical bacterial 97.4 0.057 1.9E-06 47.6 22.8 248 63-345 29-304 (361)
45 2iwa_A Glutamine cyclotransfer 97.4 0.0092 3.2E-07 50.5 15.9 151 150-333 32-182 (266)
46 2z2n_A Virginiamycin B lyase; 97.4 0.05 1.7E-06 46.2 21.1 214 63-333 78-296 (299)
47 2z2n_A Virginiamycin B lyase; 97.4 0.039 1.3E-06 46.9 20.2 215 63-329 36-254 (299)
48 3hfq_A Uncharacterized protein 97.3 0.029 9.8E-07 49.2 19.6 195 107-340 18-226 (347)
49 2qc5_A Streptogramin B lactona 97.3 0.059 2E-06 45.8 21.3 211 63-329 83-299 (300)
50 2p1m_B Transport inhibitor res 97.3 7E-05 2.4E-09 71.7 2.4 35 1-35 5-40 (594)
51 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.029 9.9E-07 50.9 19.1 225 63-341 159-394 (415)
52 3jrp_A Fusion protein of prote 97.2 0.035 1.2E-06 48.9 19.2 142 170-333 79-241 (379)
53 1ri6_A Putative isomerase YBHE 97.2 0.092 3.2E-06 45.4 22.3 210 93-343 48-273 (343)
54 2ojh_A Uncharacterized protein 97.2 0.028 9.5E-07 47.4 17.4 230 61-340 20-264 (297)
55 2aq5_A Coronin-1A; WD40 repeat 97.2 0.12 4.1E-06 46.2 23.4 198 94-333 93-300 (402)
56 2qc5_A Streptogramin B lactona 97.2 0.06 2.1E-06 45.7 19.4 213 63-329 41-259 (300)
57 3scy_A Hypothetical bacterial 97.2 0.11 3.8E-06 45.6 21.9 117 208-340 221-345 (361)
58 4aez_A CDC20, WD repeat-contai 97.1 0.059 2E-06 48.4 19.7 194 90-333 182-381 (401)
59 4g56_B MGC81050 protein; prote 97.1 0.014 4.8E-07 51.7 15.0 193 92-333 103-302 (357)
60 3u4y_A Uncharacterized protein 97.1 0.021 7.3E-07 49.5 16.0 190 92-333 7-208 (331)
61 3u4y_A Uncharacterized protein 97.1 0.099 3.4E-06 45.2 20.3 243 63-346 62-316 (331)
62 3jrp_A Fusion protein of prote 97.1 0.089 3.1E-06 46.2 20.1 121 208-344 171-298 (379)
63 3nok_A Glutaminyl cyclase; bet 97.1 0.0044 1.5E-07 52.1 10.4 106 204-333 60-165 (268)
64 1k8k_C P40, ARP2/3 complex 41 97.1 0.043 1.5E-06 48.3 17.8 231 63-343 30-285 (372)
65 3bws_A Protein LP49; two-domai 97.0 0.016 5.3E-07 52.6 15.0 191 97-333 91-293 (433)
66 1q7f_A NHL, brain tumor CG1071 97.0 0.058 2E-06 45.8 17.3 177 63-273 100-280 (286)
67 4ery_A WD repeat-containing pr 97.0 0.081 2.8E-06 45.4 18.3 190 94-333 76-269 (312)
68 1gxr_A ESG1, transducin-like e 96.9 0.094 3.2E-06 45.2 18.5 177 106-333 118-297 (337)
69 3g4e_A Regucalcin; six bladed 96.9 0.15 5.1E-06 43.6 19.5 189 94-333 24-230 (297)
70 3m0c_C LDL receptor, low-densi 96.9 0.39 1.3E-05 47.3 25.8 189 93-329 434-631 (791)
71 3no2_A Uncharacterized protein 96.9 0.066 2.3E-06 45.5 16.7 190 95-340 5-203 (276)
72 4gqb_B Methylosome protein 50; 96.9 0.055 1.9E-06 47.7 16.5 191 93-333 92-290 (344)
73 3v65_B Low-density lipoprotein 96.9 0.24 8.2E-06 44.3 24.5 216 63-329 96-317 (386)
74 1jmx_B Amine dehydrogenase; ox 96.8 0.14 4.7E-06 44.5 19.0 56 63-120 21-78 (349)
75 3jro_A Fusion protein of prote 96.8 0.079 2.7E-06 52.2 19.0 188 106-333 30-239 (753)
76 1r5m_A SIR4-interacting protei 96.8 0.083 2.8E-06 47.2 17.5 104 208-333 258-362 (425)
77 4aez_A CDC20, WD repeat-contai 96.7 0.055 1.9E-06 48.6 15.9 192 90-333 99-294 (401)
78 1k8k_C P40, ARP2/3 complex 41 96.7 0.035 1.2E-06 48.8 14.4 200 94-333 19-234 (372)
79 1q7f_A NHL, brain tumor CG1071 96.7 0.23 7.8E-06 41.9 20.0 219 63-329 51-279 (286)
80 3ei3_B DNA damage-binding prot 96.7 0.16 5.5E-06 45.0 18.4 184 106-333 95-283 (383)
81 3fvz_A Peptidyl-glycine alpha- 96.7 0.28 9.7E-06 42.6 25.1 232 64-329 70-321 (329)
82 1nir_A Nitrite reductase; hemo 96.7 0.048 1.7E-06 51.4 15.4 193 92-334 146-357 (543)
83 2hes_X YDR267CP; beta-propelle 96.7 0.24 8.1E-06 43.1 19.0 119 208-341 164-287 (330)
84 1gxr_A ESG1, transducin-like e 96.6 0.23 7.8E-06 42.7 18.7 191 93-333 61-256 (337)
85 1p22_A F-BOX/WD-repeat protein 96.6 0.047 1.6E-06 49.7 14.6 185 94-333 142-326 (435)
86 1ijq_A LDL receptor, low-densi 96.6 0.32 1.1E-05 42.1 25.9 216 63-329 10-237 (316)
87 1sq9_A Antiviral protein SKI8; 96.5 0.38 1.3E-05 42.6 23.5 113 212-333 199-323 (397)
88 2ovr_B FBW7, F-BOX/WD repeat p 96.5 0.19 6.4E-06 45.7 18.2 185 90-333 125-309 (445)
89 1kb0_A Quinohemoprotein alcoho 96.4 0.41 1.4E-05 46.4 20.6 116 90-235 73-207 (677)
90 1rwi_B Serine/threonine-protei 96.4 0.12 4.2E-06 43.1 15.2 188 92-333 32-223 (270)
91 3ow8_A WD repeat-containing pr 96.4 0.3 1E-05 42.2 18.1 212 63-328 102-319 (321)
92 1r5m_A SIR4-interacting protei 96.4 0.21 7.1E-06 44.5 17.6 145 92-273 215-361 (425)
93 3ow8_A WD repeat-containing pr 96.4 0.32 1.1E-05 42.1 18.1 144 150-333 92-238 (321)
94 1qks_A Cytochrome CD1 nitrite 96.4 0.099 3.4E-06 49.5 15.5 195 93-337 165-378 (567)
95 1yiq_A Quinohemoprotein alcoho 96.4 0.42 1.4E-05 46.4 20.4 116 90-235 66-200 (689)
96 3fm0_A Protein CIAO1; WDR39,SG 96.3 0.1 3.6E-06 45.7 14.7 193 94-328 27-223 (345)
97 3mkq_A Coatomer beta'-subunit; 96.3 0.35 1.2E-05 47.6 19.9 219 63-333 35-260 (814)
98 1got_B GT-beta; complex (GTP-b 96.3 0.45 1.6E-05 41.4 18.7 106 208-333 195-302 (340)
99 3v64_C Agrin; beta propeller, 96.3 0.51 1.7E-05 41.5 25.4 216 63-329 53-274 (349)
100 3odt_A Protein DOA1; ubiquitin 96.3 0.42 1.4E-05 40.5 18.6 106 207-338 194-300 (313)
101 4aow_A Guanine nucleotide-bind 96.3 0.34 1.2E-05 41.7 17.7 113 208-333 226-338 (340)
102 3p5b_L Low density lipoprotein 96.3 0.59 2E-05 42.0 26.0 218 63-329 92-319 (400)
103 3v7d_B Cell division control p 96.3 0.61 2.1E-05 42.4 20.2 102 208-333 321-422 (464)
104 3ogk_B Coronatine-insensitive 96.3 0.0012 4E-08 63.2 1.7 34 3-36 14-48 (592)
105 2hqs_A Protein TOLB; TOLB, PAL 96.3 0.21 7.2E-06 45.1 16.8 176 63-272 203-384 (415)
106 1got_B GT-beta; complex (GTP-b 96.2 0.33 1.1E-05 42.3 17.3 103 208-333 154-258 (340)
107 3v9f_A Two-component system se 96.2 1.1 3.7E-05 44.2 22.7 227 64-340 384-617 (781)
108 1npe_A Nidogen, entactin; glyc 96.2 0.46 1.6E-05 39.7 20.8 189 93-333 46-239 (267)
109 3vl1_A 26S proteasome regulato 96.2 0.65 2.2E-05 41.4 23.0 105 208-329 258-364 (420)
110 3fm0_A Protein CIAO1; WDR39,SG 96.2 0.13 4.4E-06 45.1 14.3 157 150-340 28-187 (345)
111 1n7d_A LDL receptor, low-densi 96.2 0.086 3E-06 51.3 14.2 218 64-333 387-615 (699)
112 1kv9_A Type II quinohemoprotei 96.2 0.77 2.6E-05 44.4 20.8 116 90-235 62-195 (668)
113 2ojh_A Uncharacterized protein 96.1 0.48 1.6E-05 39.6 18.4 152 94-281 9-166 (297)
114 3vl1_A 26S proteasome regulato 96.1 0.68 2.3E-05 41.3 20.3 104 149-273 258-365 (420)
115 3azo_A Aminopeptidase; POP fam 96.1 1 3.5E-05 43.2 22.6 198 63-285 161-377 (662)
116 3bg1_A Protein SEC13 homolog; 96.1 0.59 2E-05 40.2 19.1 111 216-344 185-304 (316)
117 1yfq_A Cell cycle arrest prote 96.1 0.44 1.5E-05 41.1 17.4 106 217-333 167-283 (342)
118 2dg1_A DRP35, lactonase; beta 96.1 0.57 2E-05 40.4 18.1 200 92-333 53-264 (333)
119 2hz6_A Endoplasmic reticulum t 96.1 0.015 5.1E-07 51.9 7.7 186 90-340 5-200 (369)
120 2ad6_A Methanol dehydrogenase 96.1 0.99 3.4E-05 42.7 20.6 117 90-235 58-193 (571)
121 1w6s_A Methanol dehydrogenase 96.0 0.83 2.8E-05 43.5 20.0 121 90-235 58-199 (599)
122 3azo_A Aminopeptidase; POP fam 96.0 0.32 1.1E-05 46.8 17.4 145 169-340 216-375 (662)
123 4a2l_A BT_4663, two-component 96.0 1.1 3.9E-05 44.1 21.7 228 64-341 108-346 (795)
124 3lrv_A PRE-mRNA-splicing facto 96.0 0.44 1.5E-05 41.5 16.8 205 88-339 88-299 (343)
125 3dwl_C Actin-related protein 2 96.0 0.038 1.3E-06 48.9 9.9 236 64-344 34-291 (377)
126 4gga_A P55CDC, cell division c 96.0 0.2 6.9E-06 45.2 14.9 146 92-273 114-261 (420)
127 2pbi_B Guanine nucleotide-bind 95.9 0.49 1.7E-05 41.6 17.0 105 209-333 210-316 (354)
128 1nir_A Nitrite reductase; hemo 95.9 0.6 2.1E-05 43.9 18.4 245 63-347 159-420 (543)
129 2pm7_B Protein transport prote 95.8 0.73 2.5E-05 39.1 22.9 115 210-341 171-293 (297)
130 3zwl_B Eukaryotic translation 95.8 0.57 1.9E-05 40.7 17.0 106 208-333 229-347 (369)
131 3dwl_C Actin-related protein 2 95.8 0.028 9.7E-07 49.8 8.4 197 94-333 22-237 (377)
132 4e54_B DNA damage-binding prot 95.8 0.14 4.7E-06 46.5 13.2 193 94-333 131-328 (435)
133 4ery_A WD repeat-containing pr 95.7 0.24 8.1E-06 42.4 13.6 105 208-333 118-224 (312)
134 4g56_B MGC81050 protein; prote 95.7 0.028 9.7E-07 49.7 7.8 188 93-329 149-342 (357)
135 4gqb_B Methylosome protein 50; 95.6 0.063 2.2E-06 47.3 9.9 189 94-333 138-332 (344)
136 2vdu_B TRNA (guanine-N(7)-)-me 95.6 1.3 4.3E-05 40.2 23.5 112 208-338 251-397 (450)
137 4a2l_A BT_4663, two-component 95.5 1.4 4.6E-05 43.6 20.1 216 64-329 428-658 (795)
138 2pm9_A Protein WEB1, protein t 95.5 0.87 3E-05 40.4 17.2 150 151-333 179-338 (416)
139 1vyh_C Platelet-activating fac 95.5 0.33 1.1E-05 43.6 14.4 63 253-333 308-370 (410)
140 3k26_A Polycomb protein EED; W 95.5 1.1 3.7E-05 38.8 17.5 67 253-329 299-365 (366)
141 3pe7_A Oligogalacturonate lyas 95.5 1.2 4.2E-05 39.1 18.9 260 50-341 47-336 (388)
142 2dg1_A DRP35, lactonase; beta 95.5 0.31 1E-05 42.2 13.7 146 150-329 56-212 (333)
143 1sq9_A Antiviral protein SKI8; 95.5 0.87 3E-05 40.2 17.0 22 310-333 244-268 (397)
144 3bg1_A Protein SEC13 homolog; 95.5 0.21 7.1E-06 43.1 12.5 195 94-329 24-246 (316)
145 2xdw_A Prolyl endopeptidase; a 95.4 2.1 7.1E-05 41.6 24.9 139 169-333 258-415 (710)
146 3lrv_A PRE-mRNA-splicing facto 95.4 1.2 4.1E-05 38.6 19.0 153 94-282 138-299 (343)
147 2ynn_A Coatomer subunit beta'; 95.4 1.1 3.8E-05 38.1 18.4 104 209-333 153-260 (304)
148 3mkq_A Coatomer beta'-subunit; 95.3 0.9 3.1E-05 44.7 18.1 178 106-333 34-218 (814)
149 2pm7_B Protein transport prote 95.3 1.2 3.9E-05 37.9 21.2 147 150-329 67-237 (297)
150 2ynn_A Coatomer subunit beta'; 95.3 0.42 1.4E-05 40.9 13.8 100 209-329 198-301 (304)
151 3v9f_A Two-component system se 95.3 1.7 5.8E-05 42.8 19.8 193 94-340 373-574 (781)
152 1ijq_A LDL receptor, low-densi 95.2 1.4 4.7E-05 38.1 17.4 174 107-329 10-194 (316)
153 3fvz_A Peptidyl-glycine alpha- 95.2 1.4 4.8E-05 38.0 23.0 190 107-333 69-278 (329)
154 3i2n_A WD repeat-containing pr 95.2 1.4 4.8E-05 38.0 20.6 189 106-329 138-352 (357)
155 3c75_H MADH, methylamine dehyd 95.1 1.8 6.1E-05 39.2 20.7 73 252-343 330-409 (426)
156 3v65_B Low-density lipoprotein 95.1 0.53 1.8E-05 42.1 14.3 175 107-329 96-276 (386)
157 3jro_A Fusion protein of prote 95.0 0.26 8.8E-06 48.5 13.0 172 150-364 21-215 (753)
158 1pjx_A Dfpase, DIISOPROPYLFLUO 95.0 1.5 5.1E-05 37.2 19.2 196 93-333 27-257 (314)
159 2z3z_A Dipeptidyl aminopeptida 94.9 2.9 0.0001 40.3 21.9 152 106-282 234-396 (706)
160 3ei3_B DNA damage-binding prot 94.8 0.9 3.1E-05 40.0 15.0 144 151-329 87-235 (383)
161 2hes_X YDR267CP; beta-propelle 94.8 0.85 2.9E-05 39.5 14.5 149 150-329 165-327 (330)
162 3e5z_A Putative gluconolactona 94.8 1.6 5.5E-05 36.8 17.7 219 63-333 50-287 (296)
163 2z3z_A Dipeptidyl aminopeptida 94.7 3 0.0001 40.3 19.6 147 169-340 234-397 (706)
164 3zwl_B Eukaryotic translation 94.7 1.9 6.3E-05 37.3 19.5 62 208-273 186-249 (369)
165 1npe_A Nidogen, entactin; glyc 94.7 1.6 5.3E-05 36.4 19.4 146 150-333 48-199 (267)
166 3hrp_A Uncharacterized protein 94.7 2.3 7.8E-05 38.2 20.2 211 92-342 139-362 (409)
167 1pjx_A Dfpase, DIISOPROPYLFLUO 94.7 1.7 5.9E-05 36.8 19.4 228 63-333 46-300 (314)
168 1vyh_C Platelet-activating fac 94.7 1.7 5.8E-05 38.9 16.6 99 209-328 308-409 (410)
169 4gga_A P55CDC, cell division c 94.7 2.3 7.8E-05 38.1 19.5 102 211-329 292-394 (420)
170 3e5z_A Putative gluconolactona 94.7 1.7 6E-05 36.6 18.9 195 94-340 39-252 (296)
171 3g4e_A Regucalcin; six bladed 94.6 0.96 3.3E-05 38.5 14.1 140 150-328 25-178 (297)
172 2aq5_A Coronin-1A; WD40 repeat 94.5 2.4 8.2E-05 37.6 18.2 105 210-333 145-255 (402)
173 1pgu_A Actin interacting prote 94.5 1.5 5E-05 41.3 16.5 106 211-333 175-284 (615)
174 2pm9_A Protein WEB1, protein t 94.5 0.31 1.1E-05 43.4 11.2 107 209-333 178-295 (416)
175 3dm0_A Maltose-binding peripla 94.5 2.7 9.2E-05 40.6 18.5 111 208-329 572-692 (694)
176 3mmy_A MRNA export factor; mRN 94.5 2.2 7.4E-05 36.8 18.1 190 106-333 107-305 (368)
177 3v64_C Agrin; beta propeller, 94.4 0.97 3.3E-05 39.7 14.0 175 107-329 53-233 (349)
178 1qks_A Cytochrome CD1 nitrite 94.4 3.5 0.00012 38.9 19.2 243 63-346 177-438 (567)
179 1flg_A Protein (quinoprotein e 94.4 3.5 0.00012 39.0 21.6 115 90-234 64-200 (582)
180 1pby_B Quinohemoprotein amine 94.4 2.1 7.3E-05 36.4 22.4 56 63-120 11-69 (337)
181 3iz6_a 40S ribosomal protein R 94.3 2.6 8.8E-05 37.2 17.9 185 106-329 179-374 (380)
182 3hxj_A Pyrrolo-quinoline quino 94.3 2.2 7.5E-05 36.4 16.6 197 65-329 80-283 (330)
183 3hrp_A Uncharacterized protein 94.3 2.8 9.7E-05 37.6 22.4 233 63-329 152-409 (409)
184 3sjl_D Methylamine dehydrogena 94.3 2.8 9.4E-05 37.4 22.8 119 208-348 237-375 (386)
185 4a11_B DNA excision repair pro 94.3 2.6 8.8E-05 37.0 18.5 23 309-333 344-366 (408)
186 2vdu_B TRNA (guanine-N(7)-)-me 94.3 3 0.0001 37.7 18.7 61 209-273 210-271 (450)
187 3sov_A LRP-6, low-density lipo 94.2 2.5 8.6E-05 36.5 24.5 186 94-329 46-237 (318)
188 3c5m_A Oligogalacturonate lyas 94.1 1.6 5.3E-05 38.4 15.0 193 62-283 167-390 (396)
189 3p5b_L Low density lipoprotein 94.1 3.1 0.00011 37.2 17.3 103 208-329 170-276 (400)
190 1erj_A Transcriptional repress 94.0 1.1 3.7E-05 39.9 13.6 200 94-333 134-342 (393)
191 1kb0_A Quinohemoprotein alcoho 94.0 2 6.9E-05 41.5 16.2 118 150-283 78-207 (677)
192 3mmy_A MRNA export factor; mRN 93.9 1.4 4.9E-05 38.0 14.2 143 95-273 54-199 (368)
193 3iz6_a 40S ribosomal protein R 93.9 3.1 0.00011 36.7 22.2 110 208-333 217-330 (380)
194 1jmx_B Amine dehydrogenase; ox 93.9 1.6 5.5E-05 37.5 14.3 68 149-234 10-79 (349)
195 2pbi_B Guanine nucleotide-bind 93.9 3 0.0001 36.3 17.4 177 106-327 175-354 (354)
196 2fp8_A Strictosidine synthase; 93.9 2.8 9.6E-05 35.9 22.8 201 94-329 91-312 (322)
197 4a11_B DNA excision repair pro 93.8 0.54 1.9E-05 41.5 11.4 146 170-333 122-277 (408)
198 2xyi_A Probable histone-bindin 93.8 0.52 1.8E-05 42.6 11.3 106 208-329 243-352 (430)
199 1pgu_A Actin interacting prote 93.8 3.8 0.00013 38.4 17.8 133 170-329 467-613 (615)
200 3f3f_A Nucleoporin SEH1; struc 93.8 2.8 9.5E-05 35.6 23.8 31 309-342 316-346 (351)
201 3k26_A Polycomb protein EED; W 93.7 1.4 4.8E-05 38.1 13.6 21 311-333 299-319 (366)
202 3vu4_A KMHSV2; beta-propeller 93.6 3.5 0.00012 36.0 16.7 185 94-329 70-270 (355)
203 3sfz_A APAF-1, apoptotic pepti 93.3 0.72 2.5E-05 48.0 12.8 144 92-273 1012-1158(1249)
204 4ggc_A P55CDC, cell division c 93.3 3.3 0.00011 34.9 18.8 103 211-329 212-314 (318)
205 2bkl_A Prolyl endopeptidase; m 93.3 6.2 0.00021 38.1 24.5 94 169-273 251-349 (695)
206 3no2_A Uncharacterized protein 93.1 3.5 0.00012 34.6 19.0 234 63-348 15-267 (276)
207 3dm0_A Maltose-binding peripla 93.0 5.1 0.00017 38.6 17.5 147 150-333 442-593 (694)
208 2ghs_A AGR_C_1268P; regucalcin 92.8 4.3 0.00015 34.9 18.1 188 94-333 60-261 (326)
209 4aow_A Guanine nucleotide-bind 92.8 4.1 0.00014 34.7 18.4 95 216-333 191-287 (340)
210 3odt_A Protein DOA1; ubiquitin 92.8 3.8 0.00013 34.3 19.5 101 208-333 154-256 (313)
211 3hxj_A Pyrrolo-quinoline quino 92.6 2.1 7.2E-05 36.5 13.0 170 93-329 69-243 (330)
212 3tc9_A Hypothetical hydrolase; 92.6 5.7 0.0002 35.9 18.1 204 93-329 148-370 (430)
213 4e54_B DNA damage-binding prot 92.6 0.56 1.9E-05 42.4 9.5 147 150-333 132-283 (435)
214 3m0c_C LDL receptor, low-densi 92.5 3.6 0.00012 40.5 15.5 103 208-329 482-588 (791)
215 4ggc_A P55CDC, cell division c 92.4 4.3 0.00015 34.1 15.6 61 209-273 253-315 (318)
216 3i2n_A WD repeat-containing pr 92.4 4.7 0.00016 34.5 22.1 239 50-333 30-292 (357)
217 3iuj_A Prolyl endopeptidase; h 92.4 8.3 0.00028 37.3 24.4 144 170-342 259-413 (693)
218 2mad_H Methylamine dehydrogena 92.4 5.5 0.00019 35.2 23.2 67 252-333 278-351 (373)
219 3gre_A Serine/threonine-protei 92.3 2.7 9.3E-05 37.6 13.8 157 150-333 182-360 (437)
220 3pe7_A Oligogalacturonate lyas 92.3 1.7 5.7E-05 38.2 12.1 108 106-235 167-279 (388)
221 3gre_A Serine/threonine-protei 92.2 3.4 0.00012 36.9 14.4 104 209-333 182-293 (437)
222 2xyi_A Probable histone-bindin 92.2 2.1 7.2E-05 38.5 12.9 107 211-333 292-411 (430)
223 1yfq_A Cell cycle arrest prote 92.2 4.9 0.00017 34.2 15.4 136 170-329 79-224 (342)
224 3c5m_A Oligogalacturonate lyas 92.2 5.6 0.00019 34.7 20.4 72 50-124 47-119 (396)
225 2xzm_R RACK1; ribosome, transl 92.1 5.4 0.00018 34.4 15.8 21 309-329 223-243 (343)
226 2ad6_A Methanol dehydrogenase 92.0 1.2 4.2E-05 42.0 11.4 122 203-341 57-194 (571)
227 1erj_A Transcriptional repress 92.0 1.5 5.2E-05 38.9 11.5 149 150-329 135-286 (393)
228 2fp8_A Strictosidine synthase; 91.9 5.5 0.00019 34.1 18.2 148 150-333 92-270 (322)
229 4h5i_A Guanine nucleotide-exch 91.8 6.2 0.00021 34.5 16.2 182 63-273 157-343 (365)
230 1pby_B Quinohemoprotein amine 91.6 4.7 0.00016 34.2 14.0 136 170-333 11-164 (337)
231 1yr2_A Prolyl oligopeptidase; 91.3 11 0.00039 36.6 22.8 145 169-342 293-449 (741)
232 1kv9_A Type II quinohemoprotei 91.2 1.5 5.1E-05 42.4 11.1 120 203-340 61-195 (668)
233 2bkl_A Prolyl endopeptidase; m 90.8 12 0.00041 36.0 20.0 213 92-340 77-313 (695)
234 3ott_A Two-component system se 90.8 13 0.00044 36.3 18.2 142 63-235 82-226 (758)
235 4a0p_A LRP6, LRP-6, low-densit 90.7 12 0.00041 35.7 21.3 123 107-259 15-141 (628)
236 4hw6_A Hypothetical protein, I 90.7 9.1 0.00031 34.6 15.3 202 94-329 152-373 (433)
237 1yiq_A Quinohemoprotein alcoho 90.4 2 7E-05 41.6 11.3 120 204-340 66-200 (689)
238 2ecf_A Dipeptidyl peptidase IV 90.3 13 0.00046 35.8 20.0 96 170-273 263-367 (741)
239 3frx_A Guanine nucleotide-bind 90.1 8.1 0.00028 32.9 17.4 144 150-333 77-228 (319)
240 1w6s_A Methanol dehydrogenase 90.1 13 0.00045 35.2 17.7 174 150-340 63-295 (599)
241 1mda_H Methylamine dehydrogena 90.0 9.6 0.00033 33.6 14.8 67 51-119 32-108 (368)
242 2ecf_A Dipeptidyl peptidase IV 89.8 15 0.00051 35.5 20.5 141 108-273 264-413 (741)
243 2p4o_A Hypothetical protein; p 89.7 8.6 0.00029 32.6 22.0 192 93-329 41-241 (306)
244 3sre_A PON1, serum paraoxonase 89.3 11 0.00036 33.1 14.7 188 106-329 82-297 (355)
245 1nr0_A Actin interacting prote 89.3 13 0.00043 35.2 15.8 110 209-333 159-271 (611)
246 3sfz_A APAF-1, apoptotic pepti 89.2 4.4 0.00015 42.0 13.5 144 150-333 627-775 (1249)
247 4h5i_A Guanine nucleotide-exch 89.2 11 0.00036 33.0 17.6 195 92-329 142-342 (365)
248 2p4o_A Hypothetical protein; p 88.9 5.6 0.00019 33.8 11.9 106 208-333 42-148 (306)
249 1flg_A Protein (quinoprotein e 88.8 4.7 0.00016 38.1 12.2 121 203-339 63-200 (582)
250 3frx_A Guanine nucleotide-bind 88.4 11 0.00037 32.1 19.5 54 216-273 172-227 (319)
251 3sov_A LRP-6, low-density lipo 88.2 12 0.0004 32.2 16.4 103 208-329 90-196 (318)
252 1jof_A Carboxy-CIS,CIS-muconat 87.5 14 0.00046 32.2 15.6 70 208-281 155-230 (365)
253 2xbg_A YCF48-like protein; pho 87.4 13 0.00045 31.9 22.2 216 72-342 24-243 (327)
254 2oiz_A Aromatic amine dehydrog 87.4 14 0.00048 32.2 20.4 87 252-364 265-358 (361)
255 2be1_A Serine/threonine-protei 87.3 1.6 5.5E-05 38.1 7.3 114 93-234 9-137 (339)
256 2ymu_A WD-40 repeat protein; u 87.1 19 0.00064 33.4 17.2 101 208-329 396-497 (577)
257 1qhu_A Protein (hemopexin); be 86.7 18 0.00063 32.9 16.5 188 94-329 158-384 (460)
258 2ymu_A WD-40 repeat protein; u 86.6 20 0.00068 33.2 16.7 101 208-329 437-538 (577)
259 1n7d_A LDL receptor, low-densi 86.5 1 3.5E-05 43.8 6.2 106 207-329 463-570 (699)
260 3s94_A LRP-6, low-density lipo 86.2 24 0.0008 33.6 23.1 191 92-333 49-244 (619)
261 3tc9_A Hypothetical hydrolase; 86.1 19 0.00065 32.4 15.7 105 208-333 149-258 (430)
262 4a0p_A LRP6, LRP-6, low-densit 86.0 24 0.00083 33.6 26.7 213 63-329 15-236 (628)
263 3ju4_A Endo-N-acetylneuraminid 85.5 8.6 0.0003 34.1 10.6 58 204-261 344-406 (670)
264 3f3f_A Nucleoporin SEH1; struc 85.5 15 0.00052 30.8 21.6 33 252-288 317-349 (351)
265 3dw8_B Serine/threonine-protei 85.4 19 0.00065 31.9 16.5 26 306-333 349-374 (447)
266 3dr2_A Exported gluconolactona 85.1 16 0.00055 30.7 17.6 195 94-340 56-273 (305)
267 3vu4_A KMHSV2; beta-propeller 85.0 18 0.00062 31.2 19.4 118 208-329 206-335 (355)
268 3ott_A Two-component system se 84.3 32 0.0011 33.5 23.8 189 92-340 71-266 (758)
269 3s94_A LRP-6, low-density lipo 84.0 30 0.001 32.9 24.1 190 93-333 359-552 (619)
270 1nr0_A Actin interacting prote 83.8 29 0.001 32.6 18.4 151 92-273 199-355 (611)
271 1qhu_A Protein (hemopexin); be 83.6 26 0.00088 31.9 17.4 53 63-120 167-219 (460)
272 2xbg_A YCF48-like protein; pho 83.3 21 0.00071 30.6 15.5 94 179-285 65-159 (327)
273 2ghs_A AGR_C_1268P; regucalcin 82.9 21 0.00073 30.4 18.6 140 150-329 61-209 (326)
274 2oaj_A Protein SNI1; WD40 repe 82.5 30 0.001 34.6 15.0 23 309-333 221-243 (902)
275 2xzm_R RACK1; ribosome, transl 82.1 23 0.00079 30.2 20.4 21 309-329 319-339 (343)
276 3dw8_B Serine/threonine-protei 82.0 16 0.00054 32.4 11.9 70 252-333 188-259 (447)
277 2hz6_A Endoplasmic reticulum t 81.5 0.41 1.4E-05 42.4 1.0 69 204-282 5-75 (369)
278 2kwv_A RAD30 homolog B, DNA po 81.0 0.65 2.2E-05 26.5 1.3 16 2-17 21-36 (48)
279 2ece_A 462AA long hypothetical 80.2 19 0.00066 32.6 11.3 118 208-343 148-298 (462)
280 1jof_A Carboxy-CIS,CIS-muconat 79.5 30 0.001 29.9 15.4 36 309-348 320-355 (365)
281 3ei3_A DNA damage-binding prot 78.2 67 0.0023 33.2 16.3 161 107-290 807-970 (1158)
282 1pex_A Collagenase-3, MMP-13; 78.2 24 0.00082 28.1 12.7 111 94-233 79-196 (207)
283 3qqz_A Putative uncharacterize 75.5 33 0.0011 28.3 14.1 112 208-327 38-150 (255)
284 3lp9_A LS-24; SEED albumin, pl 74.9 15 0.00051 29.8 8.4 109 92-230 70-202 (227)
285 3dr2_A Exported gluconolactona 74.4 37 0.0013 28.4 12.2 108 208-333 96-225 (305)
286 1fwx_A Nitrous oxide reductase 73.5 32 0.0011 32.4 11.2 215 94-329 101-360 (595)
287 3oyo_A Hemopexin fold protein 73.0 35 0.0012 27.5 13.7 58 208-273 127-196 (225)
288 2oaj_A Protein SNI1; WD40 repe 71.8 81 0.0028 31.4 14.6 114 205-333 65-183 (902)
289 2be1_A Serine/threonine-protei 71.6 10 0.00035 33.0 7.0 117 207-343 9-141 (339)
290 3c75_H MADH, methylamine dehyd 71.3 37 0.0013 30.5 10.9 113 208-333 84-210 (426)
291 3sjl_D Methylamine dehydrogena 70.8 25 0.00086 31.2 9.5 113 208-333 44-170 (386)
292 2mad_H Methylamine dehydrogena 69.9 56 0.0019 28.5 12.3 99 221-333 48-157 (373)
293 1k32_A Tricorn protease; prote 69.0 1E+02 0.0035 31.2 22.3 90 171-273 318-409 (1045)
294 3oyo_A Hemopexin fold protein 67.0 49 0.0017 26.7 10.8 107 93-229 69-198 (225)
295 3kya_A Putative phosphatase; s 66.9 79 0.0027 29.1 18.9 214 94-329 151-409 (496)
296 2xdw_A Prolyl endopeptidase; a 66.5 93 0.0032 29.8 21.7 211 92-340 81-329 (710)
297 4hw6_A Hypothetical protein, I 65.3 77 0.0026 28.4 14.5 106 209-333 153-260 (433)
298 3iuj_A Prolyl endopeptidase; h 64.6 1E+02 0.0035 29.5 19.0 103 219-340 258-365 (693)
299 1itv_A MMP9; adaptive molecula 62.9 53 0.0018 25.7 11.7 110 94-233 64-178 (195)
300 1xfd_A DIP, dipeptidyl aminope 62.4 1.1E+02 0.0037 29.1 14.9 19 107-125 91-109 (723)
301 2oiz_A Aromatic amine dehydrog 62.1 77 0.0026 27.3 12.2 103 170-288 31-150 (361)
302 1k32_A Tricorn protease; prote 61.9 43 0.0015 34.0 10.5 93 170-273 358-461 (1045)
303 2qe8_A Uncharacterized protein 61.3 76 0.0026 27.0 20.5 79 150-235 78-161 (343)
304 3kya_A Putative phosphatase; s 61.1 1E+02 0.0034 28.3 12.6 105 208-329 151-277 (496)
305 3b7f_A Glycosyl hydrolase, BNR 60.1 88 0.003 27.3 18.1 195 65-284 33-269 (394)
306 3amr_A 3-phytase; beta-propell 57.1 98 0.0034 26.9 16.5 139 170-329 50-209 (355)
307 2gop_A Trilobed protease; beta 55.1 94 0.0032 26.1 15.3 57 219-284 151-214 (347)
308 3o4h_A Acylamino-acid-releasin 54.3 1.3E+02 0.0046 27.6 18.6 53 173-235 135-190 (582)
309 2ece_A 462AA long hypothetical 54.2 1.3E+02 0.0043 27.3 19.3 120 218-345 226-364 (462)
310 2w18_A PALB2, fancn, partner a 52.6 1.2E+02 0.004 26.5 18.8 138 170-328 203-355 (356)
311 4gq1_A NUP37; propeller, trans 51.7 1E+02 0.0035 26.7 10.2 102 212-333 103-219 (393)
312 2gop_A Trilobed protease; beta 51.3 1.1E+02 0.0037 25.7 20.0 129 106-273 151-291 (347)
313 1su3_A Interstitial collagenas 49.6 1.5E+02 0.0051 26.8 10.9 110 93-234 317-437 (450)
314 1yr2_A Prolyl oligopeptidase; 48.2 1.9E+02 0.0066 27.7 20.9 209 92-340 116-358 (741)
315 2w18_A PALB2, fancn, partner a 47.8 1.4E+02 0.0048 26.0 17.2 54 216-271 301-355 (356)
316 3o4h_A Acylamino-acid-releasin 46.8 1.8E+02 0.006 26.8 16.7 111 205-338 117-231 (582)
317 2p9w_A MAL S 1 allergenic prot 46.3 1.4E+02 0.0049 25.6 15.4 153 200-365 14-196 (334)
318 3ba0_A Macrophage metalloelast 46.2 1.5E+02 0.0051 25.9 14.2 113 93-234 235-355 (365)
319 2xe4_A Oligopeptidase B; hydro 44.5 2.3E+02 0.0078 27.4 16.1 119 150-285 331-466 (751)
320 2oit_A Nucleoporin 214KDA; NH2 43.7 1.7E+02 0.006 25.9 14.7 27 208-235 203-229 (434)
321 1pex_A Collagenase-3, MMP-13; 42.0 1.3E+02 0.0043 23.8 17.4 143 90-273 29-190 (207)
322 3amr_A 3-phytase; beta-propell 41.2 1.8E+02 0.0061 25.3 19.1 190 63-286 50-271 (355)
323 3b7f_A Glycosyl hydrolase, BNR 41.2 1.8E+02 0.0061 25.3 24.0 244 64-341 82-379 (394)
324 1itv_A MMP9; adaptive molecula 40.1 1.3E+02 0.0045 23.4 13.1 110 202-333 10-128 (195)
325 1hxn_A Hemopexin, HPX; heme, b 38.3 1.5E+02 0.0052 23.6 11.2 101 93-229 27-144 (219)
326 1egx_A VAsp, vasodilator-stimu 35.4 1E+02 0.0035 21.8 5.9 36 107-144 11-46 (115)
327 2p9w_A MAL S 1 allergenic prot 35.3 2.2E+02 0.0074 24.5 18.6 217 63-319 35-304 (334)
328 2qe8_A Uncharacterized protein 34.9 2.1E+02 0.0071 24.2 14.3 120 208-341 27-162 (343)
329 1xfd_A DIP, dipeptidyl aminope 33.0 3.2E+02 0.011 25.8 20.2 57 63-123 91-150 (723)
330 1ddw_A GLGF-domain protein hom 32.0 1.1E+02 0.0037 21.8 5.6 41 106-156 10-51 (120)
331 1mda_H Methylamine dehydrogena 30.8 1.4E+02 0.0047 26.1 7.3 66 253-334 32-107 (368)
332 3qqz_A Putative uncharacterize 30.4 2.2E+02 0.0077 23.2 22.6 156 150-329 39-203 (255)
333 2cn3_A Xyloglucanase, beta-1,4 26.8 4.3E+02 0.015 25.4 22.7 240 72-346 10-295 (737)
334 1z68_A Fibroblast activation p 26.3 4.2E+02 0.014 25.0 16.0 225 63-329 90-390 (719)
335 2j04_A TAU60, YPL007P, hypothe 25.8 4.2E+02 0.014 24.9 12.4 144 92-272 138-296 (588)
336 1tl2_A L10, protein (tachylect 24.4 2.7E+02 0.0093 22.5 7.2 91 208-317 51-152 (236)
337 1su3_A Interstitial collagenas 24.2 3.9E+02 0.013 24.0 16.5 58 208-273 367-430 (450)
338 3q6k_A 43.2 kDa salivary prote 24.1 3.7E+02 0.013 23.6 12.3 84 150-236 98-198 (381)
339 1d0q_A DNA primase; zinc-bindi 23.2 49 0.0017 22.8 2.4 25 1-25 1-25 (103)
340 3c7x_A Matrix metalloproteinas 23.0 2.7E+02 0.0091 21.6 12.3 107 93-231 60-177 (196)
341 1ck7_A Protein (gelatinase A); 22.7 2.9E+02 0.01 26.2 8.2 21 208-231 548-568 (631)
342 1sqj_A OXG-RCBH, oligoxylogluc 21.3 5.7E+02 0.02 24.8 20.9 223 95-344 28-279 (789)
343 1gen_A Gelatinase A; hydrolase 21.1 3.1E+02 0.011 21.7 14.2 109 208-333 87-203 (218)
344 2oit_A Nucleoporin 214KDA; NH2 20.9 4.3E+02 0.015 23.2 13.1 97 215-329 113-222 (434)
345 3c7x_A Matrix metalloproteinas 20.9 3E+02 0.01 21.4 10.6 108 208-333 61-176 (196)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=261.77 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=217.4
Q ss_pred CCceEEEEEecCCCeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCC--CceEEEEEcCcccceeccCCCC
Q 046684 49 RPAWFLALPTRNRGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINS--TILQLVLCNPFTRQFRYLPLLN 126 (373)
Q Consensus 49 ~~~~l~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~--~~~~~~v~np~t~~w~~lp~~~ 126 (373)
....++++++......++.||+.+++|..++.++.+|..++++..++.||++||.. ..+++++|||.+++|+.++++|
T Consensus 10 ~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 10 KHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34567888876656788999999999999988888999999999999999999964 3568999999999999999999
Q ss_pred CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE
Q 046684 127 VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC 206 (373)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~ 206 (373)
.+|..+++++++ ++||++||.+ ........+++||+.+++|+.++++| ..+..++++.
T Consensus 90 ~~r~~~~~~~~~-----------~~iyv~GG~~----~~~~~~~~~~~~d~~~~~W~~~~~~p-------~~r~~~~~~~ 147 (306)
T 3ii7_A 90 TPRDSLAACAAE-----------GKIYTSGGSE----VGNSALYLFECYDTRTESWHTKPSML-------TQRCSHGMVE 147 (306)
T ss_dssp SCCBSCEEEEET-----------TEEEEECCBB----TTBSCCCCEEEEETTTTEEEEECCCS-------SCCBSCEEEE
T ss_pred ccccceeEEEEC-----------CEEEEECCCC----CCCcEeeeEEEEeCCCCceEeCCCCc-------CCcceeEEEE
Confidence 999999998886 9999999975 13445678999999999999999885 4567788899
Q ss_pred ECCEEEEEEcCC--------ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc----eEEEEeecC
Q 046684 207 TRGMLYWITSAR--------AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD----ACVWELSEG 274 (373)
Q Consensus 207 ~~g~ly~~gg~~--------~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~----~~i~~~~~~ 274 (373)
+++++|++||.. ...+++||+++++|+.+ .++|..+..+.++.++++||++||..... +.+|++
T Consensus 148 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~--- 223 (306)
T 3ii7_A 148 ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL-CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDI--- 223 (306)
T ss_dssp ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEET---
T ss_pred ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC-CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeC---
Confidence 999999998631 57899999999999999 68899999999999999999999976542 555555
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-----CccEEEEEccccCCcccEEEecccccCCC
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-----GLGMIIWREDEDKRKWEWVWVGGCCLTGG 348 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~yd~~~~~~~~~W~~~~~~~~~~~ 348 (373)
++++|+.+..+|.++. .+.++..+++||++||. ...+++||++ ++ +|+.++..|.+..
T Consensus 224 -~~~~W~~~~~~p~~r~-----------~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~--~W~~~~~~~~~r~ 286 (306)
T 3ii7_A 224 -KLNEWKMVSPMPWKGV-----------TVKCAAVGSIVYVLAGFQGVGRLGHILEYNTE--TD--KWVANSKVRAFPV 286 (306)
T ss_dssp -TTTEEEECCCCSCCBS-----------CCEEEEETTEEEEEECBCSSSBCCEEEEEETT--TT--EEEEEEEEECCSC
T ss_pred -CCCcEEECCCCCCCcc-----------ceeEEEECCEEEEEeCcCCCeeeeeEEEEcCC--CC--eEEeCCCcccccc
Confidence 5599999988887654 36777789999999984 3679999999 99 9999987664433
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.7e-34 Score=256.29 Aligned_cols=255 Identities=18% Similarity=0.223 Sum_probs=213.6
Q ss_pred CceEEEEEecC--CCeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCC----C---CceEEEEEcCccccee
Q 046684 50 PAWFLALPTRN--RGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPIN----S---TILQLVLCNPFTRQFR 120 (373)
Q Consensus 50 ~~~l~~~~~~~--~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~----~---~~~~~~v~np~t~~w~ 120 (373)
...++++++.. ....++.||+.+++|..++.++.+|..++++..++.||++||. . ..+++++||+.+++|+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 45677777642 2367889999999999998888889888899999999999996 2 1357999999999999
Q ss_pred ccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceecc
Q 046684 121 YLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWT 200 (373)
Q Consensus 121 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~ 200 (373)
+++++|.+|..+++++++ ++||++||.. .......+++||+.+++|+.++++| ..+.
T Consensus 104 ~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~~~~~yd~~~~~W~~~~~~p-------~~r~ 160 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVID-----------GHIYAVGGSH-----GCIHHNSVERYEPERDEWHLVAPML-------TRRI 160 (308)
T ss_dssp ECCCCSSCCBTCEEEEET-----------TEEEEECCEE-----TTEECCCEEEEETTTTEEEECCCCS-------SCCB
T ss_pred ECCCCCcCccccEEEEEC-----------CEEEEEcCCC-----CCcccccEEEECCCCCeEeECCCCC-------cccc
Confidence 999999999999988886 9999999987 5566788999999999999999885 4567
Q ss_pred CCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc----eEEEEee
Q 046684 201 PNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD----ACVWELS 272 (373)
Q Consensus 201 ~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~----~~i~~~~ 272 (373)
.++++.++++||++||.. ...+++||+.+++|+.+ .++|.++..+.++.++++||++||..... +.+|++
T Consensus 161 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~- 238 (308)
T 1zgk_A 161 GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDV- 238 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET-
T ss_pred ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC-CCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeC-
Confidence 788889999999998643 56899999999999999 68888998899999999999999976432 455555
Q ss_pred cCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-----CccEEEEEccccCCcccEEEecccccCC
Q 046684 273 EGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-----GLGMIIWREDEDKRKWEWVWVGGCCLTG 347 (373)
Q Consensus 273 ~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~yd~~~~~~~~~W~~~~~~~~~~ 347 (373)
++++|+++..+|.++. .+.++..+++||++||. ...+++||++ ++ +|+.++..|.+.
T Consensus 239 ---~~~~W~~~~~~p~~r~-----------~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~--~W~~~~~~p~~r 300 (308)
T 1zgk_A 239 ---ETETWTFVAPMKHRRS-----------ALGITVHQGRIYVLGGYDGHTFLDSVECYDPD--TD--TWSEVTRMTSGR 300 (308)
T ss_dssp ---TTTEEEECCCCSSCCB-----------SCEEEEETTEEEEECCBCSSCBCCEEEEEETT--TT--EEEEEEECSSCC
T ss_pred ---CCCcEEECCCCCCCcc-----------ceEEEEECCEEEEEcCcCCCcccceEEEEcCC--CC--EEeecCCCCCCc
Confidence 5599999998887654 36777789999999974 3579999999 99 999997765443
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=253.20 Aligned_cols=249 Identities=16% Similarity=0.225 Sum_probs=210.0
Q ss_pred CceEEEEEecCC--CeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCC---CceEEEEEcCcccceeccCC
Q 046684 50 PAWFLALPTRNR--GLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINS---TILQLVLCNPFTRQFRYLPL 124 (373)
Q Consensus 50 ~~~l~~~~~~~~--~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~---~~~~~~v~np~t~~w~~lp~ 124 (373)
...++++++.+. ...++.||+.+++|..++.++.+|..++++..++.||++||.. ..+++++||+.+++|+.+++
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 345777776543 3678889999999999988888888888899999999999963 24679999999999999999
Q ss_pred CCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCce
Q 046684 125 LNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNES 204 (373)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~ 204 (373)
+|.+|..+++++++ ++||++||.. ......++++||+.+++|+.++++| ..+..+++
T Consensus 95 ~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~~~~~~d~~~~~W~~~~~~p-------~~r~~~~~ 151 (302)
T 2xn4_A 95 MRDRRSTLGAAVLN-----------GLLYAVGGFD-----GSTGLSSVEAYNIKSNEWFHVAPMN-------TRRSSVGV 151 (302)
T ss_dssp CSSCCBSCEEEEET-----------TEEEEEEEEC-----SSCEEEEEEEEETTTTEEEEECCCS-------SCCBSCEE
T ss_pred CCccccceEEEEEC-----------CEEEEEcCCC-----CCccCceEEEEeCCCCeEeecCCCC-------CcccCceE
Confidence 99999999988886 9999999987 5566788999999999999999885 45677888
Q ss_pred EEECCEEEEEEcCC------ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc----eEEEEeecC
Q 046684 205 VCTRGMLYWITSAR------AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD----ACVWELSEG 274 (373)
Q Consensus 205 ~~~~g~ly~~gg~~------~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~----~~i~~~~~~ 274 (373)
+.+++++|++||.. ...+++||+++++|+.+ .++|..+..+.+++++++||++||..+.. +.+|++
T Consensus 152 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~--- 227 (302)
T 2xn4_A 152 GVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI-AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDP--- 227 (302)
T ss_dssp EEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEET---
T ss_pred EEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC-CCCccccccccEEEECCEEEEECCCCCCcccceEEEEeC---
Confidence 99999999998632 56799999999999999 78888998899999999999999976532 455555
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC-----ccEEEEEccccCCcccEEEec
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG-----LGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~yd~~~~~~~~~W~~~~ 341 (373)
++++|+.+..+|.++. .+.++..+++||++||.. ..+++||++ ++ +|+.++
T Consensus 228 -~~~~W~~~~~~~~~r~-----------~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~--~W~~~~ 283 (302)
T 2xn4_A 228 -TTNAWRQVADMNMCRR-----------NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPT--TD--KWTVVS 283 (302)
T ss_dssp -TTTEEEEECCCSSCCB-----------SCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TT--EEEECS
T ss_pred -CCCCEeeCCCCCCccc-----------cCeEEEECCEEEEECCcCCCcccccEEEEcCC--CC--eEEECC
Confidence 5599999998887654 366777899999999753 469999999 99 999987
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=249.48 Aligned_cols=254 Identities=17% Similarity=0.233 Sum_probs=212.8
Q ss_pred CceEEEEEe-cCC---CeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCC---CceEEEEEcCcccc---e
Q 046684 50 PAWFLALPT-RNR---GLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINS---TILQLVLCNPFTRQ---F 119 (373)
Q Consensus 50 ~~~l~~~~~-~~~---~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~---~~~~~~v~np~t~~---w 119 (373)
...++++++ ... ...++.||+.+++|..++.++.+|..++++..++.||++||.. ..+++++||+.+++ |
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 345777776 332 3688899999999999987777888888999999999999963 24579999999999 9
Q ss_pred eccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceec
Q 046684 120 RYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVW 199 (373)
Q Consensus 120 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~ 199 (373)
+.++++|.+|..+++++.+ ++||++||.. ......++++||+.+++|+.++++| ..+
T Consensus 94 ~~~~~~p~~r~~~~~~~~~-----------~~lyv~GG~~-----~~~~~~~~~~~d~~~~~W~~~~~~p-------~~r 150 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTLG-----------DMIYVSGGFD-----GSRRHTSMERYDPNIDQWSMLGDMQ-------TAR 150 (301)
T ss_dssp EEECCCSSCCBSCEEEEET-----------TEEEEECCBC-----SSCBCCEEEEEETTTTEEEEEEECS-------SCC
T ss_pred EECCCCCCCccceeEEEEC-----------CEEEEEcccC-----CCcccceEEEEcCCCCeEEECCCCC-------CCc
Confidence 9999999999999988886 9999999987 5556789999999999999998884 456
Q ss_pred cCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc----eEEEEe
Q 046684 200 TPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD----ACVWEL 271 (373)
Q Consensus 200 ~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~----~~i~~~ 271 (373)
..++++.+++++|++||.. ...+++||+++++|+.+ .++|.++..+.++.++++||++||..... +.+|++
T Consensus 151 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 151 EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV-TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC-CCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeC
Confidence 7788889999999998643 57899999999999999 78898998899999999999999976432 455555
Q ss_pred ecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC-----ccEEEEEccccCCcccEEEecccccC
Q 046684 272 SEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG-----LGMIIWREDEDKRKWEWVWVGGCCLT 346 (373)
Q Consensus 272 ~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~yd~~~~~~~~~W~~~~~~~~~ 346 (373)
++++|+.+..+|.++. .+.++..+++||++||.. ..+++||++ ++ +|+.++..|.+
T Consensus 230 ----~~~~W~~~~~~p~~r~-----------~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~--~W~~~~~~~~~ 290 (301)
T 2vpj_A 230 ----RTDSWTTVTSMTTPRC-----------YVGATVLRGRLYAIAGYDGNSLLSSIECYDPI--ID--SWEVVTSMGTQ 290 (301)
T ss_dssp ----TTTEEEEECCCSSCCB-----------SCEEEEETTEEEEECCBCSSSBEEEEEEEETT--TT--EEEEEEEEEEE
T ss_pred ----CCCcEEECCCCCCccc-----------ceeEEEECCEEEEEcCcCCCcccccEEEEcCC--CC--eEEEcCCCCcc
Confidence 5599999988887664 366777899999999754 579999999 99 99999876543
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=248.39 Aligned_cols=253 Identities=16% Similarity=0.209 Sum_probs=205.6
Q ss_pred eEEEEEecCCCeeEEEEeCCCCCccccCCC-CCCCCceeEEeeCcEEEEeeCC-----C----CceEEEEEcCcccceec
Q 046684 52 WFLALPTRNRGLCCYVHNPVSDKWHVLSLD-FLPYPVRPVSSIGSFLLLRPIN-----S----TILQLVLCNPFTRQFRY 121 (373)
Q Consensus 52 ~l~~~~~~~~~~~~~~~d~~~~~w~~~~~~-~~~~~~~~~~~~~g~l~~~gg~-----~----~~~~~~v~np~t~~w~~ 121 (373)
.++++++ ..++.||+.+++|...+.+ +.+|..++++..++.||++||. . ...++++|||.+++|+.
T Consensus 6 ~l~~~GG----~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 6 LIFMISE----EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEEET----TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEEcC----CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 4666666 5788899999999874332 4578888899999999999984 1 12458999999999999
Q ss_pred cCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccC
Q 046684 122 LPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTP 201 (373)
Q Consensus 122 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~ 201 (373)
++++|.+|..+++++++ ++||++||.... .+.....++++||+.+++|+.++++| .++..
T Consensus 82 ~~~~p~~r~~~~~~~~~-----------~~lyv~GG~~~~--~~~~~~~~~~~~d~~~~~W~~~~~~p-------~~r~~ 141 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEAL-----------NSIYVVGGREIK--DGERCLDSVMCYDRLSFKWGESDPLP-------YVVYG 141 (315)
T ss_dssp CCCBSSCEESCEEEEET-----------TEEEEECCEESS--TTCCBCCCEEEEETTTTEEEECCCCS-------SCCBS
T ss_pred CCCCCcchhceeEEEEC-----------CEEEEEeCCcCC--CCCcccceEEEECCCCCcEeECCCCC-------Ccccc
Confidence 99999999999988886 999999996410 13456778999999999999999885 45778
Q ss_pred CceEEECCEEEEEEcC-----CceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc--eEEEEeecC
Q 046684 202 NESVCTRGMLYWITSA-----RAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD--ACVWELSEG 274 (373)
Q Consensus 202 ~~~~~~~g~ly~~gg~-----~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~--~~i~~~~~~ 274 (373)
++++.++++||++||. ..+.+++||+.+++|+.+ .++|.++..+.+++++++||++||..... -.+|.++.
T Consensus 142 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~- 219 (315)
T 4asc_A 142 HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL-APMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSI- 219 (315)
T ss_dssp CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEET-
T ss_pred eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEEC-CCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEEC-
Confidence 8889999999999875 246899999999999999 68899999999999999999999986653 24555544
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC--------------ccEEEEEccccCCcccEEEe
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG--------------LGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~yd~~~~~~~~~W~~~ 340 (373)
++++|+.+..+|.++. .+.++..+++||++||.. ..+++||++ ++ +|+.+
T Consensus 220 -~~~~W~~~~~~p~~r~-----------~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~--~W~~~ 283 (315)
T 4asc_A 220 -TDNKWAPFEAFPQERS-----------SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE--EK--KWEGV 283 (315)
T ss_dssp -TTTEEEEECCCSSCCB-----------SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT--TT--EEEEE
T ss_pred -CCCeEEECCCCCCccc-----------ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC--CC--hhhhh
Confidence 5699999988887764 367778899999999753 458999999 99 99999
Q ss_pred cccccC
Q 046684 341 GGCCLT 346 (373)
Q Consensus 341 ~~~~~~ 346 (373)
...|..
T Consensus 284 ~~~~r~ 289 (315)
T 4asc_A 284 LREIAY 289 (315)
T ss_dssp ESCSSC
T ss_pred ccCCcC
Confidence 544433
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.7e-33 Score=246.46 Aligned_cols=247 Identities=17% Similarity=0.269 Sum_probs=201.5
Q ss_pred ceEEEEEecCCCeeEEEEeCCCCCccccCCC-CCCCCceeEEeeCcEEEEeeCCC----C-----ceEEEEEcCccccee
Q 046684 51 AWFLALPTRNRGLCCYVHNPVSDKWHVLSLD-FLPYPVRPVSSIGSFLLLRPINS----T-----ILQLVLCNPFTRQFR 120 (373)
Q Consensus 51 ~~l~~~~~~~~~~~~~~~d~~~~~w~~~~~~-~~~~~~~~~~~~~g~l~~~gg~~----~-----~~~~~v~np~t~~w~ 120 (373)
..++++++. .++.||+.+++|...+.+ +.+|..++++..++.||++||.. . ...+++|||.+++|+
T Consensus 16 ~~i~~~GG~----~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 16 DLILLVNDT----AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEEECSS----EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred chhhhcccc----ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 356776653 478899999999885433 36788888899999999999941 1 224899999999999
Q ss_pred ccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceecc
Q 046684 121 YLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWT 200 (373)
Q Consensus 121 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~ 200 (373)
.++++|.+|..+++++++ ++||++||... .......++++||+.+++|+.++++| ..+.
T Consensus 92 ~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~~---~~~~~~~~~~~yd~~~~~W~~~~~~p-------~~r~ 150 (318)
T 2woz_A 92 GLPPLPSARCLFGLGEVD-----------DKIYVVAGKDL---QTEASLDSVLCYDPVAAKWSEVKNLP-------IKVY 150 (318)
T ss_dssp ECSCBSSCBCSCEEEEET-----------TEEEEEEEEBT---TTCCEEEEEEEEETTTTEEEEECCCS-------SCEE
T ss_pred ECCCCCccccccceEEEC-----------CEEEEEcCccC---CCCcccceEEEEeCCCCCEeECCCCC-------Cccc
Confidence 999999999999988886 99999999751 02345678999999999999999885 3467
Q ss_pred CCceEEECCEEEEEEcC-----CceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCc--eEEEEeec
Q 046684 201 PNESVCTRGMLYWITSA-----RAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGD--ACVWELSE 273 (373)
Q Consensus 201 ~~~~~~~~g~ly~~gg~-----~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~--~~i~~~~~ 273 (373)
.++++.++|+||++||. ..+.+++||+.+++|+.+ .++|.++..+.+++++++||++||..... ..+|.++.
T Consensus 151 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 151 GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL-APMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEET
T ss_pred ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC-CCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEEC
Confidence 78888899999999864 256799999999999999 68888998889999999999999986653 23444444
Q ss_pred CCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC--------------ccEEEEEccccCCcccEEE
Q 046684 274 GGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG--------------LGMIIWREDEDKRKWEWVW 339 (373)
Q Consensus 274 ~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~yd~~~~~~~~~W~~ 339 (373)
++++|+.+..+|.++. .+.++..+++||++||.. ..+++||++ ++ +|+.
T Consensus 230 --~~~~W~~~~~~p~~r~-----------~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~--~W~~ 292 (318)
T 2woz_A 230 --KTNKWEVMTEFPQERS-----------SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD--KK--EWAG 292 (318)
T ss_dssp --TTCCEEECCCCSSCCB-----------SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETT--TT--EEEE
T ss_pred --CCCeEEECCCCCCccc-----------ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCC--CC--Eehh
Confidence 5699999988887654 367778899999998752 469999999 99 9998
Q ss_pred e
Q 046684 340 V 340 (373)
Q Consensus 340 ~ 340 (373)
+
T Consensus 293 ~ 293 (318)
T 2woz_A 293 M 293 (318)
T ss_dssp E
T ss_pred h
Confidence 8
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=5.7e-30 Score=231.98 Aligned_cols=252 Identities=13% Similarity=0.108 Sum_probs=193.3
Q ss_pred CceEEEEEecCCCeeEEEEeCC--CCCccccCCCC-CCCCceeEEeeCcEEEEeeCC-C-------CceEEEEEcCcccc
Q 046684 50 PAWFLALPTRNRGLCCYVHNPV--SDKWHVLSLDF-LPYPVRPVSSIGSFLLLRPIN-S-------TILQLVLCNPFTRQ 118 (373)
Q Consensus 50 ~~~l~~~~~~~~~~~~~~~d~~--~~~w~~~~~~~-~~~~~~~~~~~~g~l~~~gg~-~-------~~~~~~v~np~t~~ 118 (373)
...++++++... ..++.||+. +++|..++.++ .+|..++++..++.||++||. . ..+++++|||.+++
T Consensus 19 ~~~iyv~GG~~~-~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAG-TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGT-TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCC-CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 445677776544 478899997 48999998777 789999999999999999996 2 13579999999999
Q ss_pred eeccCCCC-CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC-------------------------------
Q 046684 119 FRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA------------------------------- 166 (373)
Q Consensus 119 w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~------------------------------- 166 (373)
|+.+++++ .+|..+++++.+ ++||++||.. ..
T Consensus 98 W~~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHN-----------GKAYVTGGVN-----QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEET-----------TEEEEEECCC-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred EEECCCCCCcccccceEEEEC-----------CEEEEEeCcC-----CCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 99999888 888888777765 9999999975 22
Q ss_pred ---cccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcC-----CceEEEEEEC--CCCcEEecc
Q 046684 167 ---TYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA-----RAYSVIGFDI--ESNTWRELS 236 (373)
Q Consensus 167 ---~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~-----~~~~i~~yd~--~~~~w~~~~ 236 (373)
.....+++||+.+++|+.+.++|. ..+..+++++++++||++||. ....++.||+ ++++|+.+
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p~------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~- 234 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESPW------YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL- 234 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECSS------CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC-
T ss_pred cccCCcccEEEEeCCCCcEEECCCCCC------CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec-
Confidence 134789999999999999988862 334557888999999999863 2567888986 89999999
Q ss_pred cCCCCC--CCceeEEEECCEEEEEEeecCC---------------------ceEEEEeecCCCCCCeEEEEeechhhhhh
Q 046684 237 APMADR--LEFATLVSRNQKLTLIGGTCGG---------------------DACVWELSEGGDDDIWCLIEKVPIEMGMR 293 (373)
Q Consensus 237 ~~~p~~--~~~~~~~~~~g~l~~~gg~~~~---------------------~~~i~~~~~~~~~~~W~~v~~~p~~~~~~ 293 (373)
.++|.+ +..+.+++.+++||++||.... .+++|+++. ++|+++..+|.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r~~- 309 (357)
T 2uvk_A 235 APVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN----GKWDKSGELSQGRAY- 309 (357)
T ss_dssp CCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------CEEEEECSSCCBS-
T ss_pred CCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC----CceeeCCCCCCCccc-
Confidence 566554 4456688999999999996421 256676654 999999999987653
Q ss_pred hcCCCCCCCceEEEecCCEEEEEEcCC------ccEEEEEccccCCcccEEEecccc
Q 046684 294 LSGGKASWGGTRCAAGNGAICLYREVG------LGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
+.++..+++||++||.. .+++.++++ ++ +|......|
T Consensus 310 ----------~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~--~~--~~~~~~~~~ 352 (357)
T 2uvk_A 310 ----------GVSLPWNNSLLIIGGETAGGKAVTDSVLITVK--DN--KVTVQNLEH 352 (357)
T ss_dssp ----------SEEEEETTEEEEEEEECGGGCEEEEEEEEEC---CC--SCEEEC---
T ss_pred ----------ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc--Cc--EeEeeeccc
Confidence 66777899999999853 468899999 99 998776544
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.97 E-value=1.3e-29 Score=224.94 Aligned_cols=247 Identities=18% Similarity=0.252 Sum_probs=197.1
Q ss_pred hhHHHhhcccccchhccccccchhhccC-CCCceEEEEEec----C---CCeeEEEEeCCCCCccccCCCCCCCCceeEE
Q 046684 20 DSLARAKSVCSHWHTCAKLYHLHSVSQH-RRPAWFLALPTR----N---RGLCCYVHNPVSDKWHVLSLDFLPYPVRPVS 91 (373)
Q Consensus 20 ~~l~r~r~Vck~W~~li~~~~f~~~~~~-~~~~~l~~~~~~----~---~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 91 (373)
.++..+....++|..+...|.-+..... .....++++++. . ....++.||+.+++|.+++.++.+|..++++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 3455566677889888654432211111 224557777664 2 1257889999999999998888899999999
Q ss_pred eeCcEEEEeeCCCC---ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc
Q 046684 92 SIGSFLLLRPINST---ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY 168 (373)
Q Consensus 92 ~~~g~l~~~gg~~~---~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~ 168 (373)
..+|.||++||... ..++++||+.+++|+.++++|.+|..+++++++ ++||++||.. ....
T Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~ 182 (308)
T 1zgk_A 119 VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN-----------RLLYAVGGFD-----GTNR 182 (308)
T ss_dssp EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET-----------TEEEEECCBC-----SSCB
T ss_pred EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC-----------CEEEEEeCCC-----CCCc
Confidence 99999999999632 457999999999999999999999999888876 9999999987 5555
Q ss_pred cceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCC
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLE 244 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~ 244 (373)
..++++||+.+++|+.++++| ..+..++++.++++||++||.. ...+++||+++++|+.+ .++|..+.
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~ 254 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMN-------TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV-APMKHRRS 254 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCS-------SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC-CCCSSCCB
T ss_pred CceEEEEeCCCCeEeeCCCCC-------CccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC-CCCCCCcc
Confidence 788999999999999999885 4567788889999999998643 57899999999999999 68888898
Q ss_pred ceeEEEECCEEEEEEeecCCc--eEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 245 FATLVSRNQKLTLIGGTCGGD--ACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 245 ~~~~~~~~g~l~~~gg~~~~~--~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
.+.++.++++||++||..... .++|.++. ++++|+.+..||.++..
T Consensus 255 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r~~ 302 (308)
T 1zgk_A 255 ALGITVHQGRIYVLGGYDGHTFLDSVECYDP--DTDTWSEVTRMTSGRSG 302 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEET--TTTEEEEEEECSSCCBS
T ss_pred ceEEEEECCEEEEEcCcCCCcccceEEEEcC--CCCEEeecCCCCCCccc
Confidence 889999999999999976532 24444444 55999999999987754
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=8.8e-30 Score=226.70 Aligned_cols=255 Identities=13% Similarity=0.115 Sum_probs=196.5
Q ss_pred Hhhcccccchhccccccchhh-ccC--CCCceEEEEEec-----CC----CeeEEEEeCCCCCccccCCCCCCCCceeEE
Q 046684 24 RAKSVCSHWHTCAKLYHLHSV-SQH--RRPAWFLALPTR-----NR----GLCCYVHNPVSDKWHVLSLDFLPYPVRPVS 91 (373)
Q Consensus 24 r~r~Vck~W~~li~~~~f~~~-~~~--~~~~~l~~~~~~-----~~----~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 91 (373)
.+....++|.. ...|.-..+ ... .....++++++. .. ...++.||+.+++|..++.++.+|..++++
T Consensus 17 ~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 95 (315)
T 4asc_A 17 AYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLG 95 (315)
T ss_dssp EEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEE
T ss_pred EECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEE
Confidence 34445677864 333221111 111 334456666652 11 145889999999999998888899999999
Q ss_pred eeCcEEEEeeCC------CCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCC
Q 046684 92 SIGSFLLLRPIN------STILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGG 165 (373)
Q Consensus 92 ~~~g~l~~~gg~------~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~ 165 (373)
..++.||++||. ...+++++||+.+++|+.++++|.+|..+++++.+ ++||++||.. ..
T Consensus 96 ~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~----~~ 160 (315)
T 4asc_A 96 EALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM-----------DLVYVIGGKG----SD 160 (315)
T ss_dssp EETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET-----------TEEEEECCBC----TT
T ss_pred EECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC-----------CEEEEEeCCC----CC
Confidence 999999999994 23467999999999999999999999999988876 9999999984 14
Q ss_pred CcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCC
Q 046684 166 ATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMAD 241 (373)
Q Consensus 166 ~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~ 241 (373)
.....++++||+.+++|+.++++| .++..++++.++++||++||.. ...+++||+++++|+.+ .++|.
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~ 232 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQ-------TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF-EAFPQ 232 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCS-------SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE-CCCSS
T ss_pred CcccceEEEEeCCCCeEEECCCCC-------CchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC-CCCCC
Confidence 556789999999999999999884 4577788899999999999743 46899999999999999 78899
Q ss_pred CCCceeEEEECCEEEEEEeecCC-----------ceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecC
Q 046684 242 RLEFATLVSRNQKLTLIGGTCGG-----------DACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGN 310 (373)
Q Consensus 242 ~~~~~~~~~~~g~l~~~gg~~~~-----------~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
++..+.++.++++||++||.... ..++|.++. ++++|+.+ ++.++. .+.++..+
T Consensus 233 ~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~--~~~~r~-----------~~~~~~~~ 297 (315)
T 4asc_A 233 ERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNE--EEKKWEGV--LREIAY-----------AAGATFLP 297 (315)
T ss_dssp CCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET--TTTEEEEE--ESCSSC-----------CSSCEEEE
T ss_pred cccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecC--CCChhhhh--ccCCcC-----------ccceEEeC
Confidence 99999999999999999997431 134555555 66999999 444332 35567778
Q ss_pred CEEEEEE
Q 046684 311 GAICLYR 317 (373)
Q Consensus 311 ~~i~~~~ 317 (373)
++||++.
T Consensus 298 ~~l~v~~ 304 (315)
T 4asc_A 298 VRLNVLR 304 (315)
T ss_dssp EEECGGG
T ss_pred CEEEEEE
Confidence 8888864
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3.1e-29 Score=227.13 Aligned_cols=236 Identities=14% Similarity=0.177 Sum_probs=181.8
Q ss_pred ccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCc--ccceeccCCCC-CCCCCCeEEEEEcCCCCCCCCCceEEE
Q 046684 77 VLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPF--TRQFRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPNFRIY 153 (373)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~--t~~w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~kl~ 153 (373)
.++.++.+|..++++..++.||++||.. .+++++||+. +++|+.++++| .+|..+++++++ ++||
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~-----------~~ly 69 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID-----------GNLY 69 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET-----------TEEE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCcCccceEEEEC-----------CEEE
Confidence 3556667787787778899999999964 3479999998 49999999999 899999998886 9999
Q ss_pred EEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC---------------
Q 046684 154 VAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR--------------- 218 (373)
Q Consensus 154 ~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~--------------- 218 (373)
++||.............++++||+.+++|+.+++++ +..+..++++.++++||++||..
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred EEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcC
Confidence 999972100112345678999999999999999884 25677777788999999999743
Q ss_pred -----------------------ceEEEEEECCCCcEEecccCCCCCCCc-eeEEEECCEEEEEEeecCC-----ceEEE
Q 046684 219 -----------------------AYSVIGFDIESNTWRELSAPMADRLEF-ATLVSRNQKLTLIGGTCGG-----DACVW 269 (373)
Q Consensus 219 -----------------------~~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~~~g~l~~~gg~~~~-----~~~i~ 269 (373)
.+.+++||+.+++|+.+ .++|..+.. +.+++.+++||++||.... .+.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA-GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE-EECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC-CCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEE
Confidence 36899999999999999 677765544 8889999999999997532 25566
Q ss_pred EeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC----------------------ccEEEEE
Q 046684 270 ELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG----------------------LGMIIWR 327 (373)
Q Consensus 270 ~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------------~~~~~yd 327 (373)
+++. ++++|+.+..++.++.. ..+.++..+++||++||.. ..+.+||
T Consensus 223 d~d~--~~~~W~~~~~~~~~~~~---------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd 291 (357)
T 2uvk_A 223 DFTG--NNLKWNKLAPVSSPDGV---------AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL 291 (357)
T ss_dssp ECC-----CEEEECCCSSTTTCC---------BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE
T ss_pred EecC--CCCcEEecCCCCCCccc---------ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe
Confidence 6644 56999999888765432 1466788899999999842 3689999
Q ss_pred ccccCCcccEEEecccccC
Q 046684 328 EDEDKRKWEWVWVGGCCLT 346 (373)
Q Consensus 328 ~~~~~~~~~W~~~~~~~~~ 346 (373)
++ ++ +|+.++..|.+
T Consensus 292 ~~--~~--~W~~~~~~p~~ 306 (357)
T 2uvk_A 292 WH--NG--KWDKSGELSQG 306 (357)
T ss_dssp CC-------CEEEEECSSC
T ss_pred cC--CC--ceeeCCCCCCC
Confidence 99 99 99999766544
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.97 E-value=9e-30 Score=225.25 Aligned_cols=243 Identities=20% Similarity=0.231 Sum_probs=192.1
Q ss_pred hHHHhhcccccchhccccccchhhccC-CCCceEEEEEecCC---CeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcE
Q 046684 21 SLARAKSVCSHWHTCAKLYHLHSVSQH-RRPAWFLALPTRNR---GLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSF 96 (373)
Q Consensus 21 ~l~r~r~Vck~W~~li~~~~f~~~~~~-~~~~~l~~~~~~~~---~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~ 96 (373)
++..+....++|..+...|.-+..... .....++++++... ...++.||+.+++|..++.++.+|..++++..++.
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 110 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGL 110 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCE
Confidence 334445556788887544432111111 22445777766432 36788999999999999888889999999999999
Q ss_pred EEEeeCCCC---ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC--cccce
Q 046684 97 LLLRPINST---ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA--TYESM 171 (373)
Q Consensus 97 l~~~gg~~~---~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~--~~~~~ 171 (373)
||++||... .+++++||+.+++|+.++++|.+|..+++++++ ++||++||.. .. ....+
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~~~~ 174 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG-----------GLLYAVGGYD-----VASRQCLST 174 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET-----------TEEEEECCEE-----TTTTEECCC
T ss_pred EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC-----------CEEEEEeCCC-----CCCCccccE
Confidence 999998632 457999999999999999999999999888876 9999999976 32 34678
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCcee
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEFAT 247 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~~~ 247 (373)
+++||+.+++|+.++++| ..+..++++.++++||++||.. ...+++||+++++|+.+ .++|..+..+.
T Consensus 175 ~~~yd~~~~~W~~~~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~ 246 (302)
T 2xn4_A 175 VECYNATTNEWTYIAEMS-------TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV-ADMNMCRRNAG 246 (302)
T ss_dssp EEEEETTTTEEEEECCCS-------SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCE
T ss_pred EEEEeCCCCcEEECCCCc-------cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeC-CCCCCccccCe
Confidence 999999999999998885 4567788899999999998643 46899999999999999 68888888888
Q ss_pred EEEECCEEEEEEeecCCc----eEEEEeecCCCCCCeEEEE-eechhhh
Q 046684 248 LVSRNQKLTLIGGTCGGD----ACVWELSEGGDDDIWCLIE-KVPIEMG 291 (373)
Q Consensus 248 ~~~~~g~l~~~gg~~~~~----~~i~~~~~~~~~~~W~~v~-~~p~~~~ 291 (373)
++..+++||++||..+.. +.+|++ ++++|+.+. .+|.++.
T Consensus 247 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~----~~~~W~~~~~~~~~~r~ 291 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGSCNLASVEYYNP----TTDKWTVVSSCMSTGRS 291 (302)
T ss_dssp EEEETTEEEEECCBCSSSBCCCEEEEET----TTTEEEECSSCCSSCCB
T ss_pred EEEECCEEEEECCcCCCcccccEEEEcC----CCCeEEECCcccCcccc
Confidence 999999999999976532 566666 459999986 6777664
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=2.9e-29 Score=221.84 Aligned_cols=246 Identities=13% Similarity=0.184 Sum_probs=197.3
Q ss_pred hHHHhhcccccchhccccccchhhccC-CCCceEEEEEecCC---CeeEEEEeCCCCC---ccccCCCCCCCCceeEEee
Q 046684 21 SLARAKSVCSHWHTCAKLYHLHSVSQH-RRPAWFLALPTRNR---GLCCYVHNPVSDK---WHVLSLDFLPYPVRPVSSI 93 (373)
Q Consensus 21 ~l~r~r~Vck~W~~li~~~~f~~~~~~-~~~~~l~~~~~~~~---~~~~~~~d~~~~~---w~~~~~~~~~~~~~~~~~~ 93 (373)
++.++....++|..+...|.-+..... .....++++++... ...++.||+.+++ |..++.++.+|..++++..
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~ 111 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL 111 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE
Confidence 444555667889887755442111111 22455777766432 3678899999999 9999888889999999999
Q ss_pred CcEEEEeeCCCC---ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 94 GSFLLLRPINST---ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 94 ~g~l~~~gg~~~---~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
++.||++||... .+++++||+.+++|+.++++|.+|..+++++++ ++||++||.+ ......
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~ 175 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS-----------GVIYCLGGYD-----GLNILN 175 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET-----------TEEEEECCBC-----SSCBCC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEEC-----------CEEEEECCCC-----CCcccc
Confidence 999999998643 458999999999999999999999998888876 9999999987 555678
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCce
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEFA 246 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~~ 246 (373)
.+++||+.+++|+.++++| ..+..++++.++++||++||.. ...+++||+++++|+.+ .++|..+..+
T Consensus 176 ~~~~~d~~~~~W~~~~~~p-------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~ 247 (301)
T 2vpj_A 176 SVEKYDPHTGHWTNVTPMA-------TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCYV 247 (301)
T ss_dssp CEEEEETTTTEEEEECCCS-------SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSC
T ss_pred eEEEEeCCCCcEEeCCCCC-------cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccce
Confidence 8999999999999998884 4566788899999999998643 57899999999999999 6888888888
Q ss_pred eEEEECCEEEEEEeecCCc--eEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 247 TLVSRNQKLTLIGGTCGGD--ACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 247 ~~~~~~g~l~~~gg~~~~~--~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
.++.++++||++||..... -.+|.++. ++++|+.+..+|.++..
T Consensus 248 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~~~~r~~ 293 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGNSLLSSIECYDP--IIDSWEVVTSMGTQRCD 293 (301)
T ss_dssp EEEEETTEEEEECCBCSSSBEEEEEEEET--TTTEEEEEEEEEEEEES
T ss_pred eEEEECCEEEEEcCcCCCcccccEEEEcC--CCCeEEEcCCCCccccc
Confidence 9999999999999976543 34555554 56999999999987754
No 13
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.97 E-value=3.4e-29 Score=221.98 Aligned_cols=246 Identities=15% Similarity=0.134 Sum_probs=195.6
Q ss_pred hHHHhhcccccchhccccccchhhccC-CCCceEEEEEecC--CCeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEE
Q 046684 21 SLARAKSVCSHWHTCAKLYHLHSVSQH-RRPAWFLALPTRN--RGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFL 97 (373)
Q Consensus 21 ~l~r~r~Vck~W~~li~~~~f~~~~~~-~~~~~l~~~~~~~--~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l 97 (373)
++.++....++|..+...|.-+..... .....++++++.. ....++.||+.+++|..++.++.+|..++++..++.|
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 104 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKI 104 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEE
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEE
Confidence 344455667789887655432111111 2344577776654 2378889999999999998888899999999999999
Q ss_pred EEeeCCC----CceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc----c
Q 046684 98 LLRPINS----TILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY----E 169 (373)
Q Consensus 98 ~~~gg~~----~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~----~ 169 (373)
|++||.+ ...++++||+.+++|+.++++|.+|..+++++++ ++||++||.. .... .
T Consensus 105 yv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~-----~~~~~~~~~ 168 (306)
T 3ii7_A 105 YTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEAN-----------GLIYVCGGSL-----GNNVSGRVL 168 (306)
T ss_dssp EEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET-----------TEEEEECCEE-----SCTTTCEEC
T ss_pred EEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEEC-----------CEEEEECCCC-----CCCCccccc
Confidence 9999964 2467999999999999999999999999888876 9999999976 3333 7
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCc
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
.++++||+.+++|+.++++| ..+..+.++.++++||++||.. ...+++||+++++|+.+ .++|..+..
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p-------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~ 240 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMI-------EARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV-SPMPWKGVT 240 (306)
T ss_dssp CCEEEEETTTTEEEEECCCS-------SCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC-CCCSCCBSC
T ss_pred ceEEEeCCCCCeEEECCCcc-------chhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC-CCCCCCccc
Confidence 88999999999999999884 4567888899999999998642 46799999999999999 788999999
Q ss_pred eeEEEECCEEEEEEeecCCc--eEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 246 ATLVSRNQKLTLIGGTCGGD--ACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 246 ~~~~~~~g~l~~~gg~~~~~--~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
+.+++++++||++||..+.. -.+|.++. ++++|+.+..+|.++..
T Consensus 241 ~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~r~~ 287 (306)
T 3ii7_A 241 VKCAAVGSIVYVLAGFQGVGRLGHILEYNT--ETDKWVANSKVRAFPVT 287 (306)
T ss_dssp CEEEEETTEEEEEECBCSSSBCCEEEEEET--TTTEEEEEEEEECCSCT
T ss_pred eeEEEECCEEEEEeCcCCCeeeeeEEEEcC--CCCeEEeCCCcccccce
Confidence 99999999999999976442 24555554 56999999999876653
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=1.2e-28 Score=219.75 Aligned_cols=231 Identities=15% Similarity=0.194 Sum_probs=186.3
Q ss_pred CCceEEEEEecC----C-----CeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCC-----CceEEEEEcC
Q 046684 49 RPAWFLALPTRN----R-----GLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINS-----TILQLVLCNP 114 (373)
Q Consensus 49 ~~~~l~~~~~~~----~-----~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~-----~~~~~~v~np 114 (373)
....++++++.. . ...++.||+.+++|..++.++.+|..++++..++.||++||.. ..+++++||+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 345577776631 1 1348899999999999988888999999999999999999863 2357999999
Q ss_pred cccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccc
Q 046684 115 FTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAV 194 (373)
Q Consensus 115 ~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~ 194 (373)
.+++|+.++++|.+|..+++++.+ ++||++||.. .......++++||+.+++|+.++++|
T Consensus 135 ~~~~W~~~~~~p~~r~~~~~~~~~-----------~~iyv~GG~~----~~~~~~~~~~~yd~~~~~W~~~~~~p----- 194 (318)
T 2woz_A 135 VAAKWSEVKNLPIKVYGHNVISHN-----------GMIYCLGGKT----DDKKCTNRVFIYNPKKGDWKDLAPMK----- 194 (318)
T ss_dssp TTTEEEEECCCSSCEESCEEEEET-----------TEEEEECCEE----SSSCBCCCEEEEETTTTEEEEECCCS-----
T ss_pred CCCCEeECCCCCCcccccEEEEEC-----------CEEEEEcCCC----CCCCccceEEEEcCCCCEEEECCCCC-----
Confidence 999999999999999998888866 9999999975 13445678999999999999999884
Q ss_pred cceeccCCceEEECCEEEEEEcCC----ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCC------
Q 046684 195 RLTVWTPNESVCTRGMLYWITSAR----AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGG------ 264 (373)
Q Consensus 195 ~~~~~~~~~~~~~~g~ly~~gg~~----~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~------ 264 (373)
..+..++++.++++||++||.. ...+++||+++++|+.+ .++|.++..+.++.++++||++||....
T Consensus 195 --~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~ 271 (318)
T 2woz_A 195 --TPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM-TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKE 271 (318)
T ss_dssp --SCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC-CCCSSCCBSCEEEEETTEEEEECCBCCBC----C
T ss_pred --CCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC-CCCCCcccceEEEEECCEEEEECCeeccCCCCce
Confidence 4567778899999999998642 46799999999999999 7888889888999999999999997531
Q ss_pred -----ceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEE
Q 046684 265 -----DACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYR 317 (373)
Q Consensus 265 -----~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
..++|.++. ++++|+++ +|..+.. +.++..+++||++.
T Consensus 272 ~~~~~~~~v~~yd~--~~~~W~~~--~~~~r~~-----------~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 272 FAPTEVNDIWKYED--DKKEWAGM--LKEIRYA-----------SGASCLATRLNLFK 314 (318)
T ss_dssp CBCCBCCCEEEEET--TTTEEEEE--ESCCGGG-----------TTCEEEEEEEEGGG
T ss_pred eccceeeeEEEEeC--CCCEehhh--ccccccc-----------ccceeeCCEEEEEE
Confidence 124555554 66999998 6655543 55667788888753
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=7.5e-25 Score=214.01 Aligned_cols=217 Identities=9% Similarity=0.100 Sum_probs=170.7
Q ss_pred CCCCCCceeEEeeCcEEEEeeCCC--CceEEEEEcCcccceeccC-C-----CCCCCCCCeEEEE--EcCCCCCCCCCce
Q 046684 81 DFLPYPVRPVSSIGSFLLLRPINS--TILQLVLCNPFTRQFRYLP-L-----LNVSRTNPAVGIV--MEGPAQHGPFPNF 150 (373)
Q Consensus 81 ~~~~~~~~~~~~~~g~l~~~gg~~--~~~~~~v~np~t~~w~~lp-~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~ 150 (373)
++..+..+ +++.++.||++||.. ..+++++|||.+++|+.++ + +|.+|..++++++ + +
T Consensus 385 ~p~rr~g~-~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~-----------~ 452 (695)
T 2zwa_A 385 PINRKFGD-VDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN-----------N 452 (695)
T ss_dssp TTCCBSCE-EEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT-----------T
T ss_pred CCCCceeE-EEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC-----------C
Confidence 33344444 445899999999963 3567999999999999988 5 7888999999888 6 9
Q ss_pred EEEEEeccCCCCCCCC-cccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCce-EEEEEEC
Q 046684 151 RIYVAGGMSDEPRGGA-TYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAY-SVIGFDI 227 (373)
Q Consensus 151 kl~~~gg~~~~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~-~i~~yd~ 227 (373)
+||++||.. .. ....++++||+.+++|+.++++| .++..++++.+ +|+||++||.... .+++||+
T Consensus 453 ~lyv~GG~~-----~~~~~~~dv~~yd~~t~~W~~~~~~p-------~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~ 520 (695)
T 2zwa_A 453 QLLLIGGRK-----APHQGLSDNWIFDMKTREWSMIKSLS-------HTRFRHSACSLPDGNVLILGGVTEGPAMLLYNV 520 (695)
T ss_dssp EEEEECCBS-----STTCBCCCCEEEETTTTEEEECCCCS-------BCCBSCEEEECTTSCEEEECCBCSSCSEEEEET
T ss_pred EEEEEcCCC-----CCCCccccEEEEeCCCCcEEECCCCC-------CCcccceEEEEcCCEEEEECCCCCCCCEEEEEC
Confidence 999999986 33 35678999999999999999885 46777888886 9999999875322 7999999
Q ss_pred CCCcEEecccC---CCCCCCceeEEEEC---CEEEEEEeecCC------ceEEEEeecCCCCCC------eEEEEeec-h
Q 046684 228 ESNTWRELSAP---MADRLEFATLVSRN---QKLTLIGGTCGG------DACVWELSEGGDDDI------WCLIEKVP-I 288 (373)
Q Consensus 228 ~~~~w~~~~~~---~p~~~~~~~~~~~~---g~l~~~gg~~~~------~~~i~~~~~~~~~~~------W~~v~~~p-~ 288 (373)
.+++|+.+ .+ +|.++.++..++++ ++||++||.... .+.+|+++. ++ |+.+..+| .
T Consensus 521 ~t~~W~~~-~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~----~~w~~~~~W~~~~~~p~~ 595 (695)
T 2zwa_A 521 TEEIFKDV-TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA----ENATEPITVIKKLQHPLF 595 (695)
T ss_dssp TTTEEEEC-CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT----TCSSCCEEEEEEEECGGG
T ss_pred CCCceEEc-cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC----CccccceEEEEcCCCCCC
Confidence 99999999 44 67788888777766 899999997432 255666654 77 99998864 3
Q ss_pred hhhhhhcCCCCCCCceEEEecC-CEEEEEEcC--------CccEEEEEccccCCcccEEEec
Q 046684 289 EMGMRLSGGKASWGGTRCAAGN-GAICLYREV--------GLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--------~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
++. .+.++..+ ++||++||. ...+++||++ ++ +|+.++
T Consensus 596 ~R~-----------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~--t~--~W~~~~ 642 (695)
T 2zwa_A 596 QRY-----------GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL--SE--TLTSIP 642 (695)
T ss_dssp CCB-----------SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT--TT--EEEECC
T ss_pred Ccc-----------cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC--CC--eEEEee
Confidence 332 36666777 999999984 3579999999 99 999653
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=1.7e-24 Score=211.57 Aligned_cols=237 Identities=11% Similarity=0.014 Sum_probs=178.1
Q ss_pred ceEEEEEecC--CCeeEEEEeCCCCCccccC-C-----CCCCCCceeEEee--CcEEEEeeCCCC----ceEEEEEcCcc
Q 046684 51 AWFLALPTRN--RGLCCYVHNPVSDKWHVLS-L-----DFLPYPVRPVSSI--GSFLLLRPINST----ILQLVLCNPFT 116 (373)
Q Consensus 51 ~~l~~~~~~~--~~~~~~~~d~~~~~w~~~~-~-----~~~~~~~~~~~~~--~g~l~~~gg~~~----~~~~~v~np~t 116 (373)
..++++++.+ ....++.||+.+++|..++ . ++.+|..++++.. +|.||++||... .+++++||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 3466676643 3367889999999999987 4 5678888999999 999999999632 46799999999
Q ss_pred cceeccCCCCCCCCCCeEEEE-EcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCcccccc
Q 046684 117 RQFRYLPLLNVSRTNPAVGIV-MEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVR 195 (373)
Q Consensus 117 ~~w~~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~ 195 (373)
++|+.++++|.+|..++++++ + ++||++||.. ... ++++||+.+++|+.+..... .
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~-----------~~iyv~GG~~-----~~~---~v~~yd~~t~~W~~~~~~g~----~ 534 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPD-----------GNVLILGGVT-----EGP---AMLLYNVTEEIFKDVTPKDE----F 534 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTT-----------SCEEEECCBC-----SSC---SEEEEETTTTEEEECCCSSG----G
T ss_pred CcEEECCCCCCCcccceEEEEcC-----------CEEEEECCCC-----CCC---CEEEEECCCCceEEccCCCC----C
Confidence 999999999999999998886 4 9999999986 333 89999999999999986311 0
Q ss_pred ceeccCCceEEEC---CEEEEEEcC------CceEEEEEECCCCc------EEecccCC-CCCCCceeEEEEC-CEEEEE
Q 046684 196 LTVWTPNESVCTR---GMLYWITSA------RAYSVIGFDIESNT------WRELSAPM-ADRLEFATLVSRN-QKLTLI 258 (373)
Q Consensus 196 ~~~~~~~~~~~~~---g~ly~~gg~------~~~~i~~yd~~~~~------w~~~~~~~-p~~~~~~~~~~~~-g~l~~~ 258 (373)
+..+..+++++++ +++|++||. ..+.+++||+.+++ |+.+ .++ +.++.++.+++++ ++||++
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~-~~~p~~~R~~~~~~~~~~~~iyv~ 613 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK-LQHPLFQRYGSQIKYITPRKLLIV 613 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE-EECGGGCCBSCEEEEEETTEEEEE
T ss_pred CCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc-CCCCCCCcccceEEEeCCCEEEEE
Confidence 3456677767777 899999864 24789999999999 8888 454 4678888888998 999999
Q ss_pred EeecCC-------ceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC-EEEEEEcC
Q 046684 259 GGTCGG-------DACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG-AICLYREV 319 (373)
Q Consensus 259 gg~~~~-------~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~ 319 (373)
||.... .+.+|++ ++++|+.+ .+|........+ ....+.++..++ +||++||.
T Consensus 614 GG~~~~~~~~~~~~v~~yd~----~t~~W~~~-~~p~~~~~~~~p---~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 614 GGTSPSGLFDRTNSIISLDP----LSETLTSI-PISRRIWEDHSL---MLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp CCBCSSCCCCTTTSEEEEET----TTTEEEEC-CCCHHHHHHSCC---CCSSCEEECC---CEEEECCE
T ss_pred CCccCCCCCCCCCeEEEEEC----CCCeEEEe-eccccccCCCCc---cceeeeEEEeCCCEEEEEeCC
Confidence 997432 2566666 45999943 455443111001 112355666554 99999974
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=5.6e-25 Score=214.60 Aligned_cols=284 Identities=9% Similarity=0.056 Sum_probs=193.2
Q ss_pred cccccchhccccccchhhccC-CCCceEEEEEecCC---------CeeEEEEeCCCCCccccCCCCCCCCcee---EEee
Q 046684 27 SVCSHWHTCAKLYHLHSVSQH-RRPAWFLALPTRNR---------GLCCYVHNPVSDKWHVLSLDFLPYPVRP---VSSI 93 (373)
Q Consensus 27 ~Vck~W~~li~~~~f~~~~~~-~~~~~l~~~~~~~~---------~~~~~~~d~~~~~w~~~~~~~~~~~~~~---~~~~ 93 (373)
....+|..+...|........ +....++++++... ...++.||+.+++|..++.++.++..++ +...
T Consensus 173 p~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~ 252 (656)
T 1k3i_A 173 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG 252 (656)
T ss_dssp TTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT
T ss_pred CCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC
Confidence 344678776655541111111 22445666655322 1468889999999999976666665543 3346
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEE-EcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIV-MEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
+|.||++||... .++++|||.+++|+++++|+.+|..++++++ + ++||++||.. .+......+
T Consensus 253 ~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d-----------g~iyv~GG~~----~~~~~~~~~ 316 (656)
T 1k3i_A 253 NGQIVVTGGNDA-KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD-----------GRVFTIGGSW----SGGVFEKNG 316 (656)
T ss_dssp TSCEEEECSSST-TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT-----------SCEEEECCCC----CSSSCCCCE
T ss_pred CCCEEEeCCCCC-CceEEecCcCCceeECCCCCccccccceEEecC-----------CeEEEEeCcc----cCCcccccc
Confidence 999999999643 3799999999999999999999999888887 5 8999999953 144456789
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC--------ceEEEEEECCCCcEEecccCCCC---
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR--------AYSVIGFDIESNTWRELSAPMAD--- 241 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~--------~~~i~~yd~~~~~w~~~~~~~p~--- 241 (373)
++||+.+++|+.++..... .. ... ....++..++++|++||.. ...+..||+++++|.......+.
T Consensus 317 e~yd~~t~~W~~~~~~~~~-p~-~~~-~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 317 EVYSPSSKTWTSLPNAKVN-PM-LTA-DKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp EEEETTTTEEEEETTSCSG-GG-CCC-CTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred eEeCCCCCcceeCCCcccc-cc-ccc-cccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 9999999999998543210 00 112 2234555789999998532 46789999999998754222221
Q ss_pred ---CCCceeEEE---ECCEEEEEEeecCC------c--eEEEEeecCCCCCCeEEEE--eechhhhhhhcCCCCCCCceE
Q 046684 242 ---RLEFATLVS---RNQKLTLIGGTCGG------D--ACVWELSEGGDDDIWCLIE--KVPIEMGMRLSGGKASWGGTR 305 (373)
Q Consensus 242 ---~~~~~~~~~---~~g~l~~~gg~~~~------~--~~i~~~~~~~~~~~W~~v~--~~p~~~~~~~~~~~~~~~~~~ 305 (373)
.+.....+. .+++||++||.... . ..++.++. ++++|+.+. .||.++.. +.
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~mp~~R~~-----------~~ 460 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP--GTSPNTVFASNGLYFARTF-----------HT 460 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST--TSCCEEEECTTCCSSCCBS-----------CE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC--CCCCeeEEccCCCCCCccc-----------CC
Confidence 122222232 48999999996421 0 13343433 558999987 78876643 44
Q ss_pred EEe-cCCEEEEEEcCC-----------ccEEEEEccccCCcccEEEecccccC
Q 046684 306 CAA-GNGAICLYREVG-----------LGMIIWREDEDKRKWEWVWVGGCCLT 346 (373)
Q Consensus 306 ~~~-~~~~i~~~~~~~-----------~~~~~yd~~~~~~~~~W~~~~~~~~~ 346 (373)
++. .+++||++||.. ..+++||++ ++ +|+.++..|.+
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~--t~--~W~~~~~~~~~ 509 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE--QD--TFYKQNPNSIV 509 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG--GT--EEEECCCCSSC
T ss_pred eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC--CC--ceeecCCCCCc
Confidence 444 499999999743 468999999 99 99988765543
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.88 E-value=4.1e-22 Score=194.36 Aligned_cols=243 Identities=15% Similarity=0.069 Sum_probs=168.1
Q ss_pred EEEEeCCCCCccccCCCCCCCCceeEEee--CcEEEEeeCCCC---------ceEEEEEcCcccceeccCCCCCCCCCCe
Q 046684 65 CYVHNPVSDKWHVLSLDFLPYPVRPVSSI--GSFLLLRPINST---------ILQLVLCNPFTRQFRYLPLLNVSRTNPA 133 (373)
Q Consensus 65 ~~~~d~~~~~w~~~~~~~~~~~~~~~~~~--~g~l~~~gg~~~---------~~~~~v~np~t~~w~~lp~~~~~~~~~~ 133 (373)
+..|||.+++|..+.++ |+..+.++.. +|.||++||... ...+++|||.|++|+.+++++.++..++
T Consensus 168 ~~~~dp~~~~W~~~~~~--P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~ 245 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL--PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC 245 (656)
T ss_dssp CCCCCTTSCEEEEEEEC--SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS
T ss_pred cccCCCCCCeeeeeccC--CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc
Confidence 44578999999987544 3333344544 999999987522 2478999999999999998887776554
Q ss_pred --EEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCE
Q 046684 134 --VGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGM 210 (373)
Q Consensus 134 --~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ 210 (373)
.++..+ ++||++||.. . ..+++||+.+++|+++++|| ..|..++++.+ +|+
T Consensus 246 ~~~~~~~~----------g~lyv~GG~~-----~----~~v~~yd~~t~~W~~~~~~~-------~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 246 PGISMDGN----------GQIVVTGGND-----A----KKTSLYDSSSDSWIPGPDMQ-------VARGYQSSATMSDGR 299 (656)
T ss_dssp CEEEECTT----------SCEEEECSSS-----T----TCEEEEEGGGTEEEECCCCS-------SCCSSCEEEECTTSC
T ss_pred ccccCCCC----------CCEEEeCCCC-----C----CceEEecCcCCceeECCCCC-------ccccccceEEecCCe
Confidence 332221 8999999976 2 27999999999999999884 45777787888 999
Q ss_pred EEEEEcC-----CceEEEEEECCCCcEEecc----cCCCCCCCceeEEEECCEEEEEEeecCC--------ceEEEEeec
Q 046684 211 LYWITSA-----RAYSVIGFDIESNTWRELS----APMADRLEFATLVSRNQKLTLIGGTCGG--------DACVWELSE 273 (373)
Q Consensus 211 ly~~gg~-----~~~~i~~yd~~~~~w~~~~----~~~p~~~~~~~~~~~~g~l~~~gg~~~~--------~~~i~~~~~ 273 (373)
+|++||. ....+.+||+++++|+.++ .|++..+. ..++..++++|++||.++. .++.|+++.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 9999873 2468999999999999873 24444433 2455578999999986542 266777754
Q ss_pred CCCCCCeEEEEeechh-hhhhhcCCCCCCCceEEE---ecCCEEEEEEcCC--------c---cEEEEEccccCCcccEE
Q 046684 274 GGDDDIWCLIEKVPIE-MGMRLSGGKASWGGTRCA---AGNGAICLYREVG--------L---GMIIWREDEDKRKWEWV 338 (373)
Q Consensus 274 ~~~~~~W~~v~~~p~~-~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~--------~---~~~~yd~~~~~~~~~W~ 338 (373)
+.|......... +... . ......++ ..+++||++||.. . .+.+||++ ++ +|+
T Consensus 379 ----~~w~~~~~~~~~~~~~~--~---~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~--~~--~W~ 445 (656)
T 1k3i_A 379 ----SGDVKSAGKRQSNRGVA--P---DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG--TS--PNT 445 (656)
T ss_dssp ----TCEEEEEEECEETTEEC--C---CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT--SC--CEE
T ss_pred ----cceeecCCccccccccC--C---CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC--CC--Cee
Confidence 787654332211 0000 0 00012233 3689999999842 1 68899999 99 999
Q ss_pred EecccccCCCC
Q 046684 339 WVGGCCLTGGK 349 (373)
Q Consensus 339 ~~~~~~~~~~~ 349 (373)
.+..-+++..|
T Consensus 446 ~~~~~~mp~~R 456 (656)
T 1k3i_A 446 VFASNGLYFAR 456 (656)
T ss_dssp EECTTCCSSCC
T ss_pred EEccCCCCCCc
Confidence 88623344444
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.22 E-value=1.1e-08 Score=94.56 Aligned_cols=44 Identities=27% Similarity=0.405 Sum_probs=39.7
Q ss_pred CCCcchHHHHHHHHhcCChhhHHHhhcccccchhccccccchhh
Q 046684 1 MWSNLHLDVLANIFSFLSPDSLARAKSVCSHWHTCAKLYHLHSV 44 (373)
Q Consensus 1 ~~~~Lp~dll~~Il~rLP~~~l~r~r~Vck~W~~li~~~~f~~~ 44 (373)
+++.||+||+.+||+.|++++|+++..|||+|+.++.++.+.+.
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 36789999999999999999999999999999999988766654
No 20
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.18 E-value=8.6e-12 Score=78.38 Aligned_cols=42 Identities=31% Similarity=0.532 Sum_probs=39.4
Q ss_pred CCcchHHHHHHHHhcCChhhHHHhhcccccchhccccccchh
Q 046684 2 WSNLHLDVLANIFSFLSPDSLARAKSVCSHWHTCAKLYHLHS 43 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rLP~~~l~r~r~Vck~W~~li~~~~f~~ 43 (373)
|..||+|++.+||++||.++++++++|||+|+.++.++.+.+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 789999999999999999999999999999999999988765
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.09 E-value=1.3e-08 Score=94.48 Aligned_cols=37 Identities=16% Similarity=0.453 Sum_probs=35.1
Q ss_pred CCcchHHHHHHHHhcCChhhHHHhhcccccchhcccc
Q 046684 2 WSNLHLDVLANIFSFLSPDSLARAKSVCSHWHTCAKL 38 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rLP~~~l~r~r~Vck~W~~li~~ 38 (373)
++.||+||+.+||+.||+++|+++..|||+|+.++.+
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999987
No 22
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.08 E-value=4.1e-09 Score=97.33 Aligned_cols=42 Identities=29% Similarity=0.434 Sum_probs=37.3
Q ss_pred CCcchHH----HHHHHHhcCChhhHHHhhcccccchhccccccchh
Q 046684 2 WSNLHLD----VLANIFSFLSPDSLARAKSVCSHWHTCAKLYHLHS 43 (373)
Q Consensus 2 ~~~Lp~d----ll~~Il~rLP~~~l~r~r~Vck~W~~li~~~~f~~ 43 (373)
++.||+| |+.+||+.|++++|+++.+|||+|+.++.++.+.+
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 3579999 99999999999999999999999999997765544
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.87 E-value=5.7e-10 Score=95.31 Aligned_cols=43 Identities=19% Similarity=0.310 Sum_probs=41.3
Q ss_pred CCcchHHHHHHHHhcCChhhHH-Hhhcccccchhccccccchhh
Q 046684 2 WSNLHLDVLANIFSFLSPDSLA-RAKSVCSHWHTCAKLYHLHSV 44 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rLP~~~l~-r~r~Vck~W~~li~~~~f~~~ 44 (373)
+..||+|||.+||+|||+++|+ |+++|||+|+.|++++.|.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~ 94 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLL 94 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHH
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHH
Confidence 5789999999999999999999 999999999999999999987
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.30 E-value=0.00048 Score=60.63 Aligned_cols=224 Identities=6% Similarity=-0.070 Sum_probs=124.6
Q ss_pred CeeEEEEeCCCCCcccc-----CCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccce-eccCCCCCCCCCCeEE
Q 046684 62 GLCCYVHNPVSDKWHVL-----SLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQF-RYLPLLNVSRTNPAVG 135 (373)
Q Consensus 62 ~~~~~~~d~~~~~w~~~-----~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w-~~lp~~~~~~~~~~~~ 135 (373)
...+..+|+.+.+.... ....+......++..++.+|+.... ...+.++|+.|++. ..++.... ...++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~--~~~v~viD~~t~~~~~~i~~~~~---p~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN--SHVIFAIDINTFKEVGRITGFTS---PRYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG--GTEEEEEETTTCCEEEEEECCSS---EEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC--CCEEEEEECcccEEEEEcCCCCC---CcEEE
Confidence 46788899998876432 1111222234466679999998763 46899999999886 33543222 12333
Q ss_pred EEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEE
Q 046684 136 IVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWIT 215 (373)
Q Consensus 136 ~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~g 215 (373)
+..+ +++|+..... ..+.++|..+++-...-..+.. . ........++..++++|+..
T Consensus 91 ~~~~----------g~lyv~~~~~----------~~v~~iD~~t~~~~~~i~~g~~-~--~~~~~p~~i~~~~~~lyv~~ 147 (328)
T 3dsm_A 91 FLSD----------EKAYVTQIWD----------YRIFIINPKTYEITGYIECPDM-D--MESGSTEQMVQYGKYVYVNC 147 (328)
T ss_dssp EEET----------TEEEEEEBSC----------SEEEEEETTTTEEEEEEECTTC-C--TTTCBCCCEEEETTEEEEEE
T ss_pred EeCC----------CeEEEEECCC----------CeEEEEECCCCeEEEEEEcCCc-c--ccCCCcceEEEECCEEEEEc
Confidence 3221 7898876332 4789999998774322111100 0 00001233455788999984
Q ss_pred cCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCC-------ceEEEEeecCCCCCCeEEEEeech
Q 046684 216 SARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGG-------DACVWELSEGGDDDIWCLIEKVPI 288 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~-------~~~i~~~~~~~~~~~W~~v~~~p~ 288 (373)
......|.++|+++++.... .+....- ......-+|++|+....... .-.++.++. ++.+......++.
T Consensus 148 ~~~~~~v~viD~~t~~~~~~-i~~g~~p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~--~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 148 WSYQNRILKIDTETDKVVDE-LTIGIQP-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA--ETFTVEKQFKFKL 223 (328)
T ss_dssp CTTCCEEEEEETTTTEEEEE-EECSSCB-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET--TTTEEEEEEECCT
T ss_pred CCCCCEEEEEECCCCeEEEE-EEcCCCc-cceEEcCCCCEEEEECCCccCCccccCCceEEEEEC--CCCeEEEEEecCC
Confidence 22467899999999876543 2222111 11122346888887643200 124555544 3354333223332
Q ss_pred hhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEccccCC
Q 046684 289 EMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
... +..++. .++.+|+.+. .++++|++ ++
T Consensus 224 g~~-----------p~~la~~~d~~~lyv~~~---~v~~~d~~--t~ 254 (328)
T 3dsm_A 224 GDW-----------PSEVQLNGTRDTLYWINN---DIWRMPVE--AD 254 (328)
T ss_dssp TCC-----------CEEEEECTTSCEEEEESS---SEEEEETT--CS
T ss_pred CCC-----------ceeEEEecCCCEEEEEcc---EEEEEECC--CC
Confidence 211 233333 3778888765 69999999 87
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.10 E-value=0.0024 Score=56.14 Aligned_cols=177 Identities=8% Similarity=-0.020 Sum_probs=102.2
Q ss_pred ceEEEEEcCcccceecc-C----CCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCC
Q 046684 106 ILQLVLCNPFTRQFRYL-P----LLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHD 180 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~l-p----~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~ 180 (373)
...+.++|+.|++...- . ..+.......+++.+ .++|+..... ..+.++|..++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-----------~~lyv~~~~~----------~~v~viD~~t~ 74 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-----------GIGWIVVNNS----------HVIFAIDINTF 74 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-----------TEEEEEEGGG----------TEEEEEETTTC
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-----------CEEEEEEcCC----------CEEEEEECccc
Confidence 56899999999987542 1 111111112333322 8899986432 57899999987
Q ss_pred ce-eeecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCC----CCceeEEEECCE
Q 046684 181 AW-QIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADR----LEFATLVSRNQK 254 (373)
Q Consensus 181 ~W-~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~----~~~~~~~~~~g~ 254 (373)
+- ..++... ....+++ -+|++|+.. .....|.++|+++.+.... .+.+.. ..-.+++..+++
T Consensus 75 ~~~~~i~~~~----------~p~~i~~~~~g~lyv~~-~~~~~v~~iD~~t~~~~~~-i~~g~~~~~~~~p~~i~~~~~~ 142 (328)
T 3dsm_A 75 KEVGRITGFT----------SPRYIHFLSDEKAYVTQ-IWDYRIFIINPKTYEITGY-IECPDMDMESGSTEQMVQYGKY 142 (328)
T ss_dssp CEEEEEECCS----------SEEEEEEEETTEEEEEE-BSCSEEEEEETTTTEEEEE-EECTTCCTTTCBCCCEEEETTE
T ss_pred EEEEEcCCCC----------CCcEEEEeCCCeEEEEE-CCCCeEEEEECCCCeEEEE-EEcCCccccCCCcceEEEECCE
Confidence 75 3333221 1122344 678999884 2467899999999876532 222220 022345557899
Q ss_pred EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC----------ccEE
Q 046684 255 LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG----------LGMI 324 (373)
Q Consensus 255 l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 324 (373)
||+........+.+++++. .+. +..++..... ....+..++++|+..... ..+.
T Consensus 143 lyv~~~~~~~~v~viD~~t----~~~--~~~i~~g~~p----------~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTET----DKV--VDELTIGIQP----------TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp EEEEECTTCCEEEEEETTT----TEE--EEEEECSSCB----------CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred EEEEcCCCCCEEEEEECCC----CeE--EEEEEcCCCc----------cceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 9998531233456666543 433 3333322111 123334568888876543 6799
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
++|++ ++
T Consensus 207 ~id~~--t~ 213 (328)
T 3dsm_A 207 RIDAE--TF 213 (328)
T ss_dssp EEETT--TT
T ss_pred EEECC--CC
Confidence 99999 88
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.06 E-value=0.0021 Score=57.46 Aligned_cols=219 Identities=12% Similarity=0.061 Sum_probs=124.5
Q ss_pred eeEEEEeCCCC--CccccCCCC-------CCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCCCCC
Q 046684 63 LCCYVHNPVSD--KWHVLSLDF-------LPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVSRTN 131 (373)
Q Consensus 63 ~~~~~~d~~~~--~w~~~~~~~-------~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~~~~ 131 (373)
..+.++|..+. .|..-.... ........+..++.||+... ...++.+|+.|++ |+.-.. ... .
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W~~~~~--~~~-~ 136 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNTSDGTVAWQTKVA--GEA-L 136 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEETTTCCEEEEEECS--SCC-C
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEECCCCCEEEEEeCC--Cce-E
Confidence 47788998765 465432111 11112335677999999776 4689999999886 543211 111 1
Q ss_pred CeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECC
Q 046684 132 PAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRG 209 (373)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g 209 (373)
....+.+ +.||+.. .+ ..+..||.++++ |+.-...+. ...+.....+..++
T Consensus 137 ~~p~~~~-----------~~v~v~~-~~----------g~l~~~d~~tG~~~W~~~~~~~~-----~~~~~~~~~~~~~~ 189 (376)
T 3q7m_A 137 SRPVVSD-----------GLVLIHT-SN----------GQLQALNEADGAVKWTVNLDMPS-----LSLRGESAPTTAFG 189 (376)
T ss_dssp SCCEEET-----------TEEEEEC-TT----------SEEEEEETTTCCEEEEEECCC----------CCCCCCEEETT
T ss_pred cCCEEEC-----------CEEEEEc-CC----------CeEEEEECCCCcEEEEEeCCCCc-----eeecCCCCcEEECC
Confidence 1112222 6677643 22 368999998876 876544321 11122234466688
Q ss_pred EEEEEEcCCceEEEEEECCCC--cEEecccCCCCCC--------CceeEEEECCEEEEEEeecCCceEEEEeecCCCCCC
Q 046684 210 MLYWITSARAYSVIGFDIESN--TWRELSAPMADRL--------EFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDI 279 (373)
Q Consensus 210 ~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~~--------~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~ 279 (373)
.+|+- .....+.++|++++ .|+.- ...+... .....+..++.+|+.+. ...+..++.+. .+..
T Consensus 190 ~v~~g--~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~--~g~l~~~d~~t--G~~~ 262 (376)
T 3q7m_A 190 AAVVG--GDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAY--NGNLTALDLRS--GQIM 262 (376)
T ss_dssp EEEEC--CTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECT--TSCEEEEETTT--CCEE
T ss_pred EEEEE--cCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEec--CcEEEEEECCC--CcEE
Confidence 88774 34568999999876 46644 2222111 12234456788887642 22355666654 3345
Q ss_pred eEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEe
Q 046684 280 WCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 280 W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
|+.- .+. ....+..++.||+... .+.+.++|++ +++..|+.-
T Consensus 263 w~~~--~~~--------------~~~~~~~~~~l~~~~~-~g~l~~~d~~--tG~~~w~~~ 304 (376)
T 3q7m_A 263 WKRE--LGS--------------VNDFIVDGNRIYLVDQ-NDRVMALTID--GGVTLWTQS 304 (376)
T ss_dssp EEEC--CCC--------------EEEEEEETTEEEEEET-TCCEEEEETT--TCCEEEEEC
T ss_pred eecc--CCC--------------CCCceEECCEEEEEcC-CCeEEEEECC--CCcEEEeec
Confidence 7642 111 1334556888988664 4579999999 887778753
No 27
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.05 E-value=0.0054 Score=53.85 Aligned_cols=222 Identities=12% Similarity=0.050 Sum_probs=113.5
Q ss_pred CeeEEEEeCCCCCcccc-CCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceec-cCCCCCCC------CCCe
Q 046684 62 GLCCYVHNPVSDKWHVL-SLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRY-LPLLNVSR------TNPA 133 (373)
Q Consensus 62 ~~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~~~~~~------~~~~ 133 (373)
...+..+|+.+.+.... +....+ ....+...++.+|+.+.. ...+.++|+.+++-.. ++...... ....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKP-FGATINNTTQTLWFGNTV--NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC-CSEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCc-ceEEECCCCCEEEEEecC--CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc
Confidence 36788899887654332 222111 222233445568877653 4589999999987533 22211100 0011
Q ss_pred EEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EE
Q 046684 134 VGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-ML 211 (373)
Q Consensus 134 ~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~l 211 (373)
..... +.+ .++|+.+... ...+.++|..+++-...-... .......++. +| .+
T Consensus 145 ~~~~s-~dg-------~~l~~~~~~~---------~~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 145 ELVAD-DAT-------NTVYISGIGK---------ESVIWVVDGGNIKLKTAIQNT--------GKMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEEE-TTT-------TEEEEEEESS---------SCEEEEEETTTTEEEEEECCC--------CTTCCCCEEETTTTEE
T ss_pred eEEEC-CCC-------CEEEEEecCC---------CceEEEEcCCCCceEEEecCC--------CCccceEEECCCCCEE
Confidence 12222 211 5577765221 246899999876532221110 1111222332 44 46
Q ss_pred EEEEcCCceEEEEEECCCCcEEecccCCCC--CC-CceeEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 212 YWITSARAYSVIGFDIESNTWRELSAPMAD--RL-EFATLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 212 y~~gg~~~~~i~~yd~~~~~w~~~~~~~p~--~~-~~~~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
|+.. ....+..+|+.+.+-... .+.+. .. ....++.. +| .||+.. .....+.+|+++. .+-......
T Consensus 200 ~~~~--~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~----~~~~~~~~~ 271 (353)
T 3vgz_A 200 YTTN--ADGELITIDTADNKILSR-KKLLDDGKEHFFINISLDTARQRAFITD-SKAAEVLVVDTRN----GNILAKVAA 271 (353)
T ss_dssp EEEC--TTSEEEEEETTTTEEEEE-EECCCSSSCCCEEEEEEETTTTEEEEEE-SSSSEEEEEETTT----CCEEEEEEC
T ss_pred EEEc--CCCeEEEEECCCCeEEEE-EEcCCCCCCcccceEEECCCCCEEEEEe-CCCCEEEEEECCC----CcEEEEEEc
Confidence 6552 357889999998765433 22211 11 11223333 44 465554 3334467777644 433222222
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+.+ ....+...++.+|+.+...+.+.+||.+ +.
T Consensus 272 ~~~------------~~~~~s~dg~~l~v~~~~~~~v~~~d~~--~~ 304 (353)
T 3vgz_A 272 PES------------LAVLFNPARNEAYVTHRQAGKVSVIDAK--SY 304 (353)
T ss_dssp SSC------------CCEEEETTTTEEEEEETTTTEEEEEETT--TT
T ss_pred CCC------------ceEEECCCCCEEEEEECCCCeEEEEECC--CC
Confidence 211 0244444567799988777889999999 77
No 28
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.97 E-value=1.3e-06 Score=73.78 Aligned_cols=43 Identities=30% Similarity=0.408 Sum_probs=40.6
Q ss_pred CCcchHHHHHHHHhcCChhhHHHhhcccccchhccccccchhh
Q 046684 2 WSNLHLDVLANIFSFLSPDSLARAKSVCSHWHTCAKLYHLHSV 44 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rLP~~~l~r~r~Vck~W~~li~~~~f~~~ 44 (373)
+..||+|++..||+.|++++|+++.+|||+|+.+.+++..++.
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 4689999999999999999999999999999999999988876
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.0022 Score=57.42 Aligned_cols=204 Identities=11% Similarity=0.052 Sum_probs=111.1
Q ss_pred eEEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCC-----CCCCeEEEEEcCCCCCCCCCceEEEEEeccCCC
Q 046684 89 PVSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVS-----RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDE 161 (373)
Q Consensus 89 ~~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~-----~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~ 161 (373)
..+..++.||+... ...++.+|+.|++ |+.-...... ..........++ ++||+....
T Consensus 48 ~p~v~~~~v~~~~~---~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~v~~~~--- 112 (376)
T 3q7m_A 48 HPALADNVVYAADR---AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG---------GHVYIGSEK--- 112 (376)
T ss_dssp CCEEETTEEEEECT---TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET---------TEEEEEETT---
T ss_pred ccEEECCEEEEEcC---CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC---------CEEEEEcCC---
Confidence 35567999999876 4689999999876 5442211100 111111111111 778875422
Q ss_pred CCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCc--EEeccc
Q 046684 162 PRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNT--WRELSA 237 (373)
Q Consensus 162 ~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~--w~~~~~ 237 (373)
..+..+|.++++ |+.-..-+ .....+..++.+|+.. ....+.+||+++++ |+.- .
T Consensus 113 --------g~l~a~d~~tG~~~W~~~~~~~----------~~~~p~~~~~~v~v~~--~~g~l~~~d~~tG~~~W~~~-~ 171 (376)
T 3q7m_A 113 --------AQVYALNTSDGTVAWQTKVAGE----------ALSRPVVSDGLVLIHT--SNGQLQALNEADGAVKWTVN-L 171 (376)
T ss_dssp --------SEEEEEETTTCCEEEEEECSSC----------CCSCCEEETTEEEEEC--TTSEEEEEETTTCCEEEEEE-C
T ss_pred --------CEEEEEECCCCCEEEEEeCCCc----------eEcCCEEECCEEEEEc--CCCeEEEEECCCCcEEEEEe-C
Confidence 368999998776 76543221 1223366788888763 45689999998775 7755 2
Q ss_pred CCCCC--CCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhh--hhhcCCCCCCCceEEEecCCEE
Q 046684 238 PMADR--LEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMG--MRLSGGKASWGGTRCAAGNGAI 313 (373)
Q Consensus 238 ~~p~~--~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~i 313 (373)
+.+.. +.....+..++.+++. .....+..++.++ .+..|+.-...+.... ..+... ....+..++.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~g--~~~g~l~~~d~~t--G~~~w~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~~v 242 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTAFGAAVVG--GDNGRVSAVLMEQ--GQMIWQQRISQATGSTEIDRLSDV-----DTTPVVVNGVV 242 (376)
T ss_dssp CC-----CCCCCCEEETTEEEEC--CTTTEEEEEETTT--CCEEEEEECCC-----------CC-----CCCCEEETTEE
T ss_pred CCCceeecCCCCcEEECCEEEEE--cCCCEEEEEECCC--CcEEEEEecccCCCCccccccccc-----CCCcEEECCEE
Confidence 22211 1123344557776663 2233355566554 4456765433222110 000000 12223457888
Q ss_pred EEEEcCCccEEEEEccccCCcccEEEe
Q 046684 314 CLYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 314 ~~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
|+.. ..+.+.++|++ +++..|+.-
T Consensus 243 ~~~~-~~g~l~~~d~~--tG~~~w~~~ 266 (376)
T 3q7m_A 243 FALA-YNGNLTALDLR--SGQIMWKRE 266 (376)
T ss_dssp EEEC-TTSCEEEEETT--TCCEEEEEC
T ss_pred EEEe-cCcEEEEEECC--CCcEEeecc
Confidence 8854 34579999999 887778753
No 30
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.88 E-value=0.004 Score=54.83 Aligned_cols=255 Identities=10% Similarity=-0.026 Sum_probs=122.3
Q ss_pred eeEEEEeCCCCCccccCC-CCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSL-DFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~-~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..++.+|+.+.+...+.. ...........+-+|.+|+.+.......+.+||..+++.+.+.........+....+. +.
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s-pd 96 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD-EA 96 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE-TT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC-CC
Confidence 456667887777655421 1122222234455777777664223468999999888776654432222222222232 11
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECC-CCceeeecCCCccccccc--eeccCCceEEE--CCEEEEEEc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSR-HDAWQIIGSMPVEFAVRL--TVWTPNESVCT--RGMLYWITS 216 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~~~~~~--~~~~~~~~~~~--~g~ly~~gg 216 (373)
+ ..+|+.+..+ ..+.+|+.. +++.+.+...+..-..|. ........+.+ +|++|+. .
T Consensus 97 g-------~~l~~~~~~~----------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~-~ 158 (347)
T 3hfq_A 97 R-------QLVYSANYHK----------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI-D 158 (347)
T ss_dssp T-------TEEEEEETTT----------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE-E
T ss_pred C-------CEEEEEeCCC----------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE-e
Confidence 1 4566655222 357777774 334443322210000000 00001111222 5777766 4
Q ss_pred CCceEEEEEECC-CCcEEeccc-CCCCCCCceeEEE-ECCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 217 ARAYSVIGFDIE-SNTWRELSA-PMADRLEFATLVS-RNQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 217 ~~~~~i~~yd~~-~~~w~~~~~-~~p~~~~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
.....+..||+. +++...+.. ..+....-..++. -+|+ ||+.+ .....+.+|+++. .+.+++.+..+......
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~--~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG-ELSSQIASLKYDT--QTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEEET--TTTEEEEEEEEESSCTT
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe-CCCCEEEEEEecC--CCCceEEeeeeeecCCC
Confidence 445689999988 555554311 1111111112222 3666 55544 3444578999885 45677665543321100
Q ss_pred hhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEecccc
Q 046684 293 RLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
+... .......+...|..||+.+...+.+.+||++. .+ +.+.+...+
T Consensus 236 -~~~~-~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g--~~~~~~~~~ 282 (347)
T 3hfq_A 236 -YTAH-NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DG--HLTLIQQIS 282 (347)
T ss_dssp -CCSC-CEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GG--CEEEEEEEE
T ss_pred -CCCC-CcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CC--cEEEeEEEe
Confidence 0000 00001222223456888877677899999851 33 445444433
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.87 E-value=0.0042 Score=52.53 Aligned_cols=203 Identities=10% Similarity=-0.067 Sum_probs=114.2
Q ss_pred eeEEeeC-cEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC
Q 046684 88 RPVSSIG-SFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA 166 (373)
Q Consensus 88 ~~~~~~~-g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~ 166 (373)
+.+...+ |.+|+..|....+.+.++|+.|++-..--+++.......++..+ .++|+..-.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-----------~~lyv~t~~~------- 85 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-----------EKLYQVVWLK------- 85 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-----------TEEEEEETTC-------
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-----------CEEEEEEecC-------
Confidence 3455544 89999887555689999999999865432222222222333332 7899986432
Q ss_pred cccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEE-ecccC---CCCC
Q 046684 167 TYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWR-ELSAP---MADR 242 (373)
Q Consensus 167 ~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~-~~~~~---~p~~ 242 (373)
..+.+||..+.+ .+..+|.+ ...+...+.-++.+|+.. ..+.+..+|+++.+-. .++.. .|..
T Consensus 86 ---~~v~viD~~t~~--v~~~i~~g------~~~g~glt~Dg~~l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 86 ---NIGFIYDRRTLS--NIKNFTHQ------MKDGWGLATDGKILYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp ---SEEEEEETTTTE--EEEEEECC------SSSCCEEEECSSSEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred ---CEEEEEECCCCc--EEEEEECC------CCCeEEEEECCCEEEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 578999998754 23323210 011222222245677653 4679999999986543 33111 1111
Q ss_pred CCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhh---cCCCCCCCceEEEe--cCCEEEEEE
Q 046684 243 LEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRL---SGGKASWGGTRCAA--GNGAICLYR 317 (373)
Q Consensus 243 ~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~---~~~~~~~~~~~~~~--~~~~i~~~~ 317 (373)
.. ..+...+|+||+-... .. .|...+. .+.+.+..++....... ...........++. .++.+|+.+
T Consensus 153 ~~-nele~~dg~lyvn~~~-~~--~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 153 RL-NELEYINGEVWANIWQ-TD--CIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CE-EEEEEETTEEEEEETT-SS--EEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred cc-eeEEEECCEEEEecCC-CC--eEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 11 1334448999865432 22 5777766 66667777665322100 00000001233333 467999999
Q ss_pred cCCccEEEEEcc
Q 046684 318 EVGLGMIIWRED 329 (373)
Q Consensus 318 ~~~~~~~~yd~~ 329 (373)
...++++..++.
T Consensus 225 k~~~~v~~i~l~ 236 (266)
T 2iwa_A 225 KLWPKLFEIKLH 236 (266)
T ss_dssp TTCSEEEEEEEE
T ss_pred CCCCeEEEEEEe
Confidence 998899999988
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.85 E-value=0.004 Score=51.71 Aligned_cols=183 Identities=17% Similarity=0.109 Sum_probs=107.9
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
+.+|.-.|.. + .+.+.++|+++++=.....+|. .......+..++++|.+. ...+.+.+||+++
T Consensus 31 ~~LyestG~~-----g---~S~v~~vD~~tgkv~~~~~l~~-------~~fgeGi~~~~~~ly~lt-w~~~~v~v~D~~t 94 (243)
T 3mbr_X 31 GHLYESTGET-----G---RSSVRKVDLETGRILQRAEVPP-------PYFGAGIVAWRDRLIQLT-WRNHEGFVYDLAT 94 (243)
T ss_dssp TEEEEEECCT-----T---SCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEETTEEEEEE-SSSSEEEEEETTT
T ss_pred CEEEEECCCC-----C---CceEEEEECCCCCEEEEEeCCC-------CcceeEEEEeCCEEEEEE-eeCCEEEEEECCc
Confidence 7799887654 2 4678999999988654444431 112234567789999994 5678999999987
Q ss_pred CcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec
Q 046684 230 NTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG 309 (373)
Q Consensus 230 ~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
-+-..- .+.+ ..+.+++.-+++||+..|. . .++.++. .+-+.+..++...-..-. ...-.+...
T Consensus 95 l~~~~t-i~~~--~~Gwglt~dg~~L~vSdgs--~--~l~~iDp----~t~~~~~~I~V~~~g~~~-----~~lNeLe~~ 158 (243)
T 3mbr_X 95 LTPRAR-FRYP--GEGWALTSDDSHLYMSDGT--A--VIRKLDP----DTLQQVGSIKVTAGGRPL-----DNLNELEWV 158 (243)
T ss_dssp TEEEEE-EECS--SCCCEEEECSSCEEEECSS--S--EEEEECT----TTCCEEEEEECEETTEEC-----CCEEEEEEE
T ss_pred CcEEEE-EeCC--CCceEEeeCCCEEEEECCC--C--eEEEEeC----CCCeEEEEEEEccCCccc-----ccceeeEEe
Confidence 654432 2333 2455666667788887652 2 4666655 444455554432211000 001122334
Q ss_pred CCEEEEEEcCCccEEEEEccccCCcc-cEEEecccccCCCC--cccccceeEEEeccccc
Q 046684 310 NGAICLYREVGLGMIIWREDEDKRKW-EWVWVGGCCLTGGK--QVQNVPMRGVLLHPSLA 366 (373)
Q Consensus 310 ~~~i~~~~~~~~~~~~yd~~~~~~~~-~W~~~~~~~~~~~~--~~~~~~~~~~~~~p~l~ 366 (373)
+++||+-...++.|.+-|++ ++++ .|..+.++--.... .-....+.|+.|.|.=+
T Consensus 159 ~G~lyanvw~s~~I~vIDp~--tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPA--SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp TTEEEEEETTTTEEEEECTT--TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred CCEEEEEECCCCeEEEEECC--CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 88999877677889999999 8843 24334333111100 00123578899988543
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.0028 Score=53.14 Aligned_cols=182 Identities=11% Similarity=-0.025 Sum_probs=105.6
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
+.+|.-.|.. + .+.+.++|+++++=.....++. .......+..++++|++. ...+.+.+||+++
T Consensus 53 ~~LyestG~~-----g---~S~v~~vD~~Tgkv~~~~~l~~-------~~FgeGit~~g~~ly~lt-w~~~~v~v~D~~t 116 (262)
T 3nol_A 53 GYFYESTGLN-----G---RSSIRKVDIESGKTLQQIELGK-------RYFGEGISDWKDKIVGLT-WKNGLGFVWNIRN 116 (262)
T ss_dssp TEEEEEEEET-----T---EEEEEEECTTTCCEEEEEECCT-------TCCEEEEEEETTEEEEEE-SSSSEEEEEETTT
T ss_pred CEEEEECCCC-----C---CceEEEEECCCCcEEEEEecCC-------ccceeEEEEeCCEEEEEE-eeCCEEEEEECcc
Confidence 7899887654 1 3578999999987544333421 112233566789999994 5678999999987
Q ss_pred CcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCce-EEEe
Q 046684 230 NTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGT-RCAA 308 (373)
Q Consensus 230 ~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~-~~~~ 308 (373)
.+-..- .+.+ ..+.+++.-++.||+..|. . .++.++. .+-+.+..++...-.+.. ... .+..
T Consensus 117 ~~~~~t-i~~~--~eG~glt~dg~~L~~SdGs---~-~i~~iDp----~T~~v~~~I~V~~~g~~~------~~lNELe~ 179 (262)
T 3nol_A 117 LRQVRS-FNYD--GEGWGLTHNDQYLIMSDGT---P-VLRFLDP----ESLTPVRTITVTAHGEEL------PELNELEW 179 (262)
T ss_dssp CCEEEE-EECS--SCCCCEEECSSCEEECCSS---S-EEEEECT----TTCSEEEEEECEETTEEC------CCEEEEEE
T ss_pred CcEEEE-EECC--CCceEEecCCCEEEEECCC---C-eEEEEcC----CCCeEEEEEEeccCCccc------cccceeEE
Confidence 664432 2332 2455666667778887652 2 5666665 444455554442110000 011 1223
Q ss_pred cCCEEEEEEcCCccEEEEEccccCCcc-cEEEecccccCCC-CcccccceeEEEeccccc
Q 046684 309 GNGAICLYREVGLGMIIWREDEDKRKW-EWVWVGGCCLTGG-KQVQNVPMRGVLLHPSLA 366 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~~~~~~~-~W~~~~~~~~~~~-~~~~~~~~~~~~~~p~l~ 366 (373)
.++.||+-...++.|.+-|++ ++++ .|..++++.-... ..-....+.|+.|.|.=+
T Consensus 180 ~~G~lyan~w~~~~I~vIDp~--tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 180 VDGEIFANVWQTNKIVRIDPE--TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp ETTEEEEEETTSSEEEEECTT--TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred ECCEEEEEEccCCeEEEEECC--CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 378999877777889999999 8843 2333332211000 000123578899988533
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.77 E-value=0.002 Score=57.72 Aligned_cols=215 Identities=11% Similarity=0.030 Sum_probs=108.7
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-ee-CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SI-GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~-~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..+..+|..+++....-.. .....+++ +. +..+++.++. ...+.+||+.+++....-..+. ... .+...+
T Consensus 12 ~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~~~~---~v~-~~~~sp 83 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPV--GSNPMGAVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVPAGS---SPQ-GVAVSP 83 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEECSS---SEE-EEEECT
T ss_pred CEEEEEECCCCeEEEEeec--CCCcceEEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEECCC---Ccc-ceEECC
Confidence 4677788877654322111 11112222 33 4467676643 4689999999887644322221 111 222211
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCE-EEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGM-LYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~-ly~~gg~~ 218 (373)
.+ ..+++.+..+ ..+.+||..+++-........ .....++. +|. +|+. +..
T Consensus 84 dg-------~~l~~~~~~~----------~~v~v~d~~~~~~~~~~~~~~---------~~~~~~~s~dg~~l~~~-~~~ 136 (391)
T 1l0q_A 84 DG-------KQVYVTNMAS----------STLSVIDTTSNTVAGTVKTGK---------SPLGLALSPDGKKLYVT-NNG 136 (391)
T ss_dssp TS-------SEEEEEETTT----------TEEEEEETTTTEEEEEEECSS---------SEEEEEECTTSSEEEEE-ETT
T ss_pred CC-------CEEEEEECCC----------CEEEEEECCCCeEEEEEeCCC---------CcceEEECCCCCEEEEE-eCC
Confidence 11 4566665332 468999998876433322210 11122222 344 6666 455
Q ss_pred ceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcC
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSG 296 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~ 296 (373)
...|..+|+.+++.... .... .....++.. +|+ |++.+ ..+..+.+|++.. . +.+..++.....
T Consensus 137 ~~~v~~~d~~~~~~~~~-~~~~--~~~~~~~~~~dg~~l~~~~-~~~~~v~~~d~~~----~--~~~~~~~~~~~~---- 202 (391)
T 1l0q_A 137 DKTVSVINTVTKAVINT-VSVG--RSPKGIAVTPDGTKVYVAN-FDSMSISVIDTVT----N--SVIDTVKVEAAP---- 202 (391)
T ss_dssp TTEEEEEETTTTEEEEE-EECC--SSEEEEEECTTSSEEEEEE-TTTTEEEEEETTT----T--EEEEEEECSSEE----
T ss_pred CCEEEEEECCCCcEEEE-EecC--CCcceEEECCCCCEEEEEe-CCCCEEEEEECCC----C--eEEEEEecCCCc----
Confidence 67899999998876544 2221 111222222 454 44544 3444578888754 3 333333321110
Q ss_pred CCCCCCceEEEecCCEEEEEEc--CCccEEEEEccccCC
Q 046684 297 GKASWGGTRCAAGNGAICLYRE--VGLGMIIWREDEDKR 333 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~yd~~~~~~ 333 (373)
....+...+..|++.+. ..+.+.+||++ ++
T Consensus 203 -----~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~--~~ 234 (391)
T 1l0q_A 203 -----SGIAVNPEGTKAYVTNVDKYFNTVSMIDTG--TN 234 (391)
T ss_dssp -----EEEEECTTSSEEEEEEECSSCCEEEEEETT--TT
T ss_pred -----cceEECCCCCEEEEEecCcCCCcEEEEECC--CC
Confidence 01222223456666654 56789999999 77
No 35
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.77 E-value=9e-06 Score=72.03 Aligned_cols=43 Identities=30% Similarity=0.519 Sum_probs=39.4
Q ss_pred CCcchHHHHHHHHhcCChhhHHHhhcccccchhccccccchhh
Q 046684 2 WSNLHLDVLANIFSFLSPDSLARAKSVCSHWHTCAKLYHLHSV 44 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rLP~~~l~r~r~Vck~W~~li~~~~f~~~ 44 (373)
|++||+|++.+||++|+.+++.+++.|||+|+.+..++..++.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhee
Confidence 7899999999999999999999999999999999987765543
No 36
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.71 E-value=0.0036 Score=56.87 Aligned_cols=220 Identities=8% Similarity=-0.027 Sum_probs=110.6
Q ss_pred eEEEEeCCCCCccccCCCCCCCCcee-EEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCC---CCCCCCeEEEEEc
Q 046684 64 CCYVHNPVSDKWHVLSLDFLPYPVRP-VSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLN---VSRTNPAVGIVME 139 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~~~~~~~~~~-~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~---~~~~~~~~~~~~~ 139 (373)
.++.+|+.+..+..+..........+ ..+.++.+++.++. ...+.+||+.+++.....+.. ........... .
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~-~ 178 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLE--DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI-P 178 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTT--SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE-G
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCC--CCeEEEEECCCCeEeeecCcccccccCCceeEEEE-c
Confidence 55666665554433321111111112 22337888887764 356999999998876543321 11111111112 1
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EEEEEEcC
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSA 217 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~ 217 (373)
+ ++++++.++.+ ..+.+||..+++-...-... .......++. +| .+|+. +.
T Consensus 179 ~--------~~~~~~s~~~d----------~~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~-~~ 231 (433)
T 3bws_A 179 E--------HNELWVSQMQA----------NAVHVFDLKTLAYKATVDLT--------GKWSKILLYDPIRDLVYCS-NW 231 (433)
T ss_dssp G--------GTEEEEEEGGG----------TEEEEEETTTCCEEEEEECS--------SSSEEEEEEETTTTEEEEE-ET
T ss_pred C--------CCEEEEEECCC----------CEEEEEECCCceEEEEEcCC--------CCCeeEEEEcCCCCEEEEE-ec
Confidence 1 16777777543 46899998876532211110 0011122222 33 46665 44
Q ss_pred CceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeec-------CCceEEEEeecCCCCCCeEEEEeechh
Q 046684 218 RAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTC-------GGDACVWELSEGGDDDIWCLIEKVPIE 289 (373)
Q Consensus 218 ~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~-------~~~~~i~~~~~~~~~~~W~~v~~~p~~ 289 (373)
....|..||+.+++.... .+.. ..-..++. -+|+.+++++.. +..+.+|++.. .+ .+..+...
T Consensus 232 ~~~~i~~~d~~~~~~~~~-~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~----~~--~~~~~~~~ 302 (433)
T 3bws_A 232 ISEDISVIDRKTKLEIRK-TDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK----EK--LIDTIGPP 302 (433)
T ss_dssp TTTEEEEEETTTTEEEEE-CCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT----TE--EEEEEEEE
T ss_pred CCCcEEEEECCCCcEEEE-ecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC----Cc--EEeeccCC
Confidence 567899999988766443 2221 11122222 255444444432 22367888754 32 22222111
Q ss_pred hhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 290 MGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
... ....+...++.+|+.+...+.+.+||++ ++
T Consensus 303 ~~~---------~~~~~~~~g~~l~~~~~~~~~v~v~d~~--~~ 335 (433)
T 3bws_A 303 GNK---------RHIVSGNTENKIYVSDMCCSKIEVYDLK--EK 335 (433)
T ss_dssp ECE---------EEEEECSSTTEEEEEETTTTEEEEEETT--TT
T ss_pred CCc---------ceEEECCCCCEEEEEecCCCEEEEEECC--CC
Confidence 100 0122223355788888888899999999 77
No 37
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.66 E-value=0.011 Score=49.68 Aligned_cols=199 Identities=6% Similarity=-0.173 Sum_probs=106.8
Q ss_pred eEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc
Q 046684 89 PVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY 168 (373)
Q Consensus 89 ~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~ 168 (373)
.+...++.+|...|..+.+.+.++|+.|++-..--+++......+++..+ .+||++...+
T Consensus 47 GL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-----------~~ly~ltw~~--------- 106 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-----------DKIVGLTWKN--------- 106 (262)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-----------TEEEEEESSS---------
T ss_pred eEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-----------CEEEEEEeeC---------
Confidence 45556899999988766779999999999865432333322222344443 8999986443
Q ss_pred cceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEE-ecccCC-CCCCCc-
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWR-ELSAPM-ADRLEF- 245 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~-~~~~~~-p~~~~~- 245 (373)
..+.+||.++.+=..--+.+ . .+...+.-++.+|+.. ....+..+|+++.+-. .+.... +.+...
T Consensus 107 -~~v~v~D~~t~~~~~ti~~~------~---eG~glt~dg~~L~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 107 -GLGFVWNIRNLRQVRSFNYD------G---EGWGLTHNDQYLIMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp -SEEEEEETTTCCEEEEEECS------S---CCCCEEECSSCEEECC--SSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred -CEEEEEECccCcEEEEEECC------C---CceEEecCCCEEEEEC--CCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 57999999886632221111 1 2233333345566653 3678999999986543 331111 111111
Q ss_pred eeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcC--CCCCCCceEEE--ecCCEEEEEEcCCc
Q 046684 246 ATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSG--GKASWGGTRCA--AGNGAICLYREVGL 321 (373)
Q Consensus 246 ~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~--~~~~~~~~~~~--~~~~~i~~~~~~~~ 321 (373)
..+...+|+||+-. .... .|...+. ++. +.+..++...+..... .......-.++ ..++.+|+.|..-+
T Consensus 175 NELe~~~G~lyan~-w~~~--~I~vIDp--~tG--~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 175 NELEWVDGEIFANV-WQTN--KIVRIDP--ETG--KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp EEEEEETTEEEEEE-TTSS--EEEEECT--TTC--BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ceeEEECCEEEEEE-ccCC--eEEEEEC--CCC--cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 12445599999654 2222 4555655 334 3444443322111000 00000122233 34689999887765
Q ss_pred cEEEE
Q 046684 322 GMIIW 326 (373)
Q Consensus 322 ~~~~y 326 (373)
+++.-
T Consensus 248 ~~~ev 252 (262)
T 3nol_A 248 KVFEI 252 (262)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 55443
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.65 E-value=0.0053 Score=51.56 Aligned_cols=179 Identities=9% Similarity=-0.025 Sum_probs=104.9
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
..+|+..|.. ..+.++|+++++=.... ++.. ......+..++++|.+ ....+.+.+||+++
T Consensus 65 ~~Ly~stG~~----------g~v~~iD~~Tgkv~~~~-l~~~-------~FgeGit~~g~~Ly~l-tw~~~~v~V~D~~T 125 (268)
T 3nok_A 65 GHFFESTGHQ----------GTLRQLSLESAQPVWME-RLGN-------IFAEGLASDGERLYQL-TWTEGLLFTWSGMP 125 (268)
T ss_dssp TEEEEEETTT----------TEEEECCSSCSSCSEEE-ECTT-------CCEEEEEECSSCEEEE-ESSSCEEEEEETTT
T ss_pred CEEEEEcCCC----------CEEEEEECCCCcEEeEE-CCCC-------cceeEEEEeCCEEEEE-EccCCEEEEEECCc
Confidence 7899988765 23899999988743322 4311 1122346678899999 45688999999988
Q ss_pred CcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec
Q 046684 230 NTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG 309 (373)
Q Consensus 230 ~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
.+-..- .+.+ ..+.+++.-+++||+..|. . .++.++. .+-+.+..++...-..... ..-.....
T Consensus 126 l~~~~t-i~~~--~eGwGLt~Dg~~L~vSdGs--~--~l~~iDp----~T~~v~~~I~V~~~g~~v~-----~lNeLe~~ 189 (268)
T 3nok_A 126 PQRERT-TRYS--GEGWGLCYWNGKLVRSDGG--T--MLTFHEP----DGFALVGAVQVKLRGQPVE-----LINELECA 189 (268)
T ss_dssp TEEEEE-EECS--SCCCCEEEETTEEEEECSS--S--EEEEECT----TTCCEEEEEECEETTEECC-----CEEEEEEE
T ss_pred CcEEEE-EeCC--CceeEEecCCCEEEEECCC--C--EEEEEcC----CCCeEEEEEEeCCCCcccc-----cccccEEe
Confidence 655432 2332 3456677778888888642 2 5666655 4445555554432110000 00112233
Q ss_pred CCEEEEEEcCCccEEEEEccccCCcc-cEEEecccc--cC--CCCcccccceeEEEecccccc
Q 046684 310 NGAICLYREVGLGMIIWREDEDKRKW-EWVWVGGCC--LT--GGKQVQNVPMRGVLLHPSLAC 367 (373)
Q Consensus 310 ~~~i~~~~~~~~~~~~yd~~~~~~~~-~W~~~~~~~--~~--~~~~~~~~~~~~~~~~p~l~~ 367 (373)
++.||+-...++.|.+-|++ ++++ .|..+.++. .. .... ...+.|+.|.|.=+.
T Consensus 190 dG~lyanvw~s~~I~vIDp~--TG~V~~~Idl~~L~~~~~~~~~~~--~~vlNGIA~dp~~~r 248 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEIDPA--TGTVVGVIDASALTRAVAGQVTNP--EAVLNGIAVEPGSGR 248 (268)
T ss_dssp TTEEEEEETTCSEEEEECTT--TCBEEEEEECHHHHHHHTTTCCCT--TCCEEEEEECTTTCC
T ss_pred CCEEEEEECCCCeEEEEeCC--CCcEEEEEECCCCcccccccccCc--CCceEEEEEcCCCCE
Confidence 78999877677889999999 8843 243333221 00 1111 235788999886443
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.61 E-value=0.0028 Score=56.77 Aligned_cols=215 Identities=9% Similarity=0.095 Sum_probs=111.4
Q ss_pred eeEEEEeCCCCCcccc-CCCCCCCCceeEE--eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEc
Q 046684 63 LCCYVHNPVSDKWHVL-SLDFLPYPVRPVS--SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVME 139 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~--~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~ 139 (373)
..+..+|..+.+.... .... ....++ ..+..+++.+.. ...+.+||+.+++....-... .. . ..+...
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~--~~-~-~~~~~s 124 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS---SPQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVKTG--KS-P-LGLALS 124 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECS--SS-E-EEEEEC
T ss_pred CeEEEEECCCCeEEEEEECCC---CccceEECCCCCEEEEEECC--CCEEEEEECCCCeEEEEEeCC--CC-c-ceEEEC
Confidence 4667788877654332 2111 222222 225557666643 467999999998764432211 11 1 122221
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EEEEEEcC
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSA 217 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~ 217 (373)
+.+ ..+|+.++.+ ..+.+||..+++......... ....+++. +| .+|+. +.
T Consensus 125 ~dg-------~~l~~~~~~~----------~~v~~~d~~~~~~~~~~~~~~---------~~~~~~~~~dg~~l~~~-~~ 177 (391)
T 1l0q_A 125 PDG-------KKLYVTNNGD----------KTVSVINTVTKAVINTVSVGR---------SPKGIAVTPDGTKVYVA-NF 177 (391)
T ss_dssp TTS-------SEEEEEETTT----------TEEEEEETTTTEEEEEEECCS---------SEEEEEECTTSSEEEEE-ET
T ss_pred CCC-------CEEEEEeCCC----------CEEEEEECCCCcEEEEEecCC---------CcceEEECCCCCEEEEE-eC
Confidence 111 4576766443 478999998876543322210 01111222 34 46555 44
Q ss_pred CceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEee--cCCceEEEEeecCCCCCCeEEEEeechhhhhhh
Q 046684 218 RAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGT--CGGDACVWELSEGGDDDIWCLIEKVPIEMGMRL 294 (373)
Q Consensus 218 ~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~--~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~ 294 (373)
....+..+|+.+++.... .+... ....++. -+|+.+++++. ....+.+|+++. . +.+..++.....
T Consensus 178 ~~~~v~~~d~~~~~~~~~-~~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~----~--~~~~~~~~~~~~-- 246 (391)
T 1l0q_A 178 DSMSISVIDTVTNSVIDT-VKVEA--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT----N--KITARIPVGPDP-- 246 (391)
T ss_dssp TTTEEEEEETTTTEEEEE-EECSS--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTT----T--EEEEEEECCSSE--
T ss_pred CCCEEEEEECCCCeEEEE-EecCC--CccceEECCCCCEEEEEecCcCCCcEEEEECCC----C--eEEEEEecCCCc--
Confidence 567899999998865544 22211 1112222 24554444443 334478888754 3 344444332110
Q ss_pred cCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 295 SGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....+...+..||+.+...+.+.+||++ ++
T Consensus 247 -------~~~~~s~dg~~l~~s~~~d~~v~v~d~~--~~ 276 (391)
T 1l0q_A 247 -------AGIAVTPDGKKVYVALSFXNTVSVIDTA--TN 276 (391)
T ss_dssp -------EEEEECTTSSEEEEEETTTTEEEEEETT--TT
T ss_pred -------cEEEEccCCCEEEEEcCCCCEEEEEECC--CC
Confidence 0122222355788887777889999999 87
No 40
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.58 E-value=0.0085 Score=52.21 Aligned_cols=153 Identities=9% Similarity=0.077 Sum_probs=79.7
Q ss_pred ceEEEEECCC-Cceeeec--CCCccccccceeccCCceEEE--CCE-EEEEEcCCceEEEEEECC--CCcEEecc--cCC
Q 046684 170 SMVEMYDSRH-DAWQIIG--SMPVEFAVRLTVWTPNESVCT--RGM-LYWITSARAYSVIGFDIE--SNTWRELS--APM 239 (373)
Q Consensus 170 ~~~~~yd~~~-~~W~~~~--~~p~~~~~~~~~~~~~~~~~~--~g~-ly~~gg~~~~~i~~yd~~--~~~w~~~~--~~~ 239 (373)
..+.+||..+ ++..... .... ... .....+.+ +|. +|+. +.....+..||+. ++++.... ...
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~pdg~~l~~~-~~~~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTT-----VEG-AGPRHMVFHPNEQYAYCV-NELNSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEEC-----STT-CCEEEEEECTTSSEEEEE-ETTTTEEEEEESSCTTSCCEEEEEEECS
T ss_pred CEEEEEEecCCCceeeeccccccc-----CCC-CCcceEEECCCCCEEEEE-eCCCCEEEEEEecCCCCcEEEEeecccc
Confidence 3588999877 6665432 1100 000 01111222 454 6666 3456778899985 34443220 112
Q ss_pred CCC---CCce-eEEEE-CCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEE
Q 046684 240 ADR---LEFA-TLVSR-NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAI 313 (373)
Q Consensus 240 p~~---~~~~-~~~~~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 313 (373)
+.. .... .++.. +|+ ||+. ......+.+|+++. ++.+++.+..++..... ....+...+..|
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~-~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~---------~~~~~s~dg~~l 291 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYAC-DRTASLITVFSVSE--DGSVLSKEGFQPTETQP---------RGFNVDHSGKYL 291 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECT--TSCCEEEEEEEECSSSC---------CCEEECTTSSEE
T ss_pred CccccccCCccceEECCCCCEEEEE-ecCCCEEEEEEEcC--CCCceEEeeeecCCCcc---------ceEEECCCCCEE
Confidence 221 1111 23222 454 5444 33445589999975 45678887766543211 123333345667
Q ss_pred EEEEcCCccEEEE--EccccCCcccEEEeccccc
Q 046684 314 CLYREVGLGMIIW--REDEDKRKWEWVWVGGCCL 345 (373)
Q Consensus 314 ~~~~~~~~~~~~y--d~~~~~~~~~W~~~~~~~~ 345 (373)
|+.+...+.+.+| |++ ++ +++.+...+.
T Consensus 292 ~~~~~~~~~v~v~~~d~~--~g--~~~~~~~~~~ 321 (343)
T 1ri6_A 292 IAAGQKSHHISVYEIVGE--QG--LLHEKGRYAV 321 (343)
T ss_dssp EEECTTTCEEEEEEEETT--TT--EEEEEEEEEC
T ss_pred EEecCCCCeEEEEEEcCC--Cc--eeeEcccccc
Confidence 7776566677787 666 78 7887766554
No 41
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.58 E-value=0.0017 Score=53.93 Aligned_cols=109 Identities=14% Similarity=0.017 Sum_probs=82.3
Q ss_pred ceEEECCEEEEEEcCC-ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 203 ESVCTRGMLYWITSAR-AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 203 ~~~~~~g~ly~~gg~~-~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
...+.++.||.-+|.. ...|..+|+++++-... .+++....+.+++..+++||++....+ .+|.++. ++-+
T Consensus 25 GL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~-~~l~~~~fgeGi~~~~~~ly~ltw~~~---~v~v~D~----~tl~ 96 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETGRSSVRKVDLETGRILQR-AEVPPPYFGAGIVAWRDRLIQLTWRNH---EGFVYDL----ATLT 96 (243)
T ss_dssp EEEEETTEEEEEECCTTSCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESSSS---EEEEEET----TTTE
T ss_pred cEEEECCEEEEECCCCCCceEEEEECCCCCEEEE-EeCCCCcceeEEEEeCCEEEEEEeeCC---EEEEEEC----CcCc
Confidence 3456678899887654 57899999999987765 566666666788888999999964332 4566654 6678
Q ss_pred EEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 282 LIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 282 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+.+++.+.. +..++..++.+|+.++ ++.+..+|++ +.
T Consensus 97 ~~~ti~~~~~-----------Gwglt~dg~~L~vSdg-s~~l~~iDp~--t~ 134 (243)
T 3mbr_X 97 PRARFRYPGE-----------GWALTSDDSHLYMSDG-TAVIRKLDPD--TL 134 (243)
T ss_dssp EEEEEECSSC-----------CCEEEECSSCEEEECS-SSEEEEECTT--TC
T ss_pred EEEEEeCCCC-----------ceEEeeCCCEEEEECC-CCeEEEEeCC--CC
Confidence 8888876531 5777888889999876 7789999999 86
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.46 E-value=0.019 Score=48.17 Aligned_cols=215 Identities=11% Similarity=0.018 Sum_probs=107.1
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPA 142 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~ 142 (373)
..+..+|+.+.....................+|.+|+... ...+.++|+.++....++... ...+. .+..++
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~~--~~~p~-~i~~~~-- 117 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFDG--LNYPE-GLAVDT-- 117 (270)
T ss_dssp CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET---TTEEEEECTTCSCCEECCCCS--CSSEE-EEEECT--
T ss_pred CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC---CCEEEEEeCCCceEeeeecCC--cCCCc-ceEECC--
Confidence 4666788766544333222212222222334677888765 467999999887655443211 11112 222221
Q ss_pred CCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceE
Q 046684 143 QHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYS 221 (373)
Q Consensus 143 ~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~ 221 (373)
+ +++|+..... ..+.+|+..+.......... .......++- +|.+|+.. .....
T Consensus 118 -~-----g~l~v~~~~~----------~~i~~~~~~~~~~~~~~~~~--------~~~p~~i~~~~~g~l~v~~-~~~~~ 172 (270)
T 1rwi_B 118 -Q-----GAVYVADRGN----------NRVVKLAAGSKTQTVLPFTG--------LNDPDGVAVDNSGNVYVTD-TDNNR 172 (270)
T ss_dssp -T-----CCEEEEEGGG----------TEEEEECTTCCSCEECCCCS--------CCSCCCEEECTTCCEEEEE-GGGTE
T ss_pred -C-----CCEEEEECCC----------CEEEEEECCCceeEeecccc--------CCCceeEEEeCCCCEEEEE-CCCCE
Confidence 1 6688865322 35778876655443221110 0111222332 57888874 33568
Q ss_pred EEEEECCCCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCC
Q 046684 222 VIGFDIESNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKAS 300 (373)
Q Consensus 222 i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~ 300 (373)
|..||+.++.-... ..... ..-.+++.- +|.||+.... ...+.+|+++. ..-.. .+....
T Consensus 173 i~~~~~~~~~~~~~-~~~~~-~~p~~i~~d~~g~l~v~~~~-~~~v~~~~~~~----~~~~~---~~~~~~--------- 233 (270)
T 1rwi_B 173 VVKLEAESNNQVVL-PFTDI-TAPWGIAVDEAGTVYVTEHN-TNQVVKLLAGS----TTSTV---LPFTGL--------- 233 (270)
T ss_dssp EEEECTTTCCEEEC-CCSSC-CSEEEEEECTTCCEEEEETT-TSCEEEECTTC----SCCEE---CCCCSC---------
T ss_pred EEEEecCCCceEee-cccCC-CCceEEEECCCCCEEEEECC-CCcEEEEcCCC----Cccee---eccCCC---------
Confidence 99999987765443 11111 112233333 5688887632 23355665532 22111 111100
Q ss_pred CCceEEEe-cCCEEEEEEcCCccEEEEEcc
Q 046684 301 WGGTRCAA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 301 ~~~~~~~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++. .++.||+.+...+.|.+|++.
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 01234443 356899998888889999988
No 43
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.42 E-value=0.027 Score=49.25 Aligned_cols=205 Identities=8% Similarity=0.020 Sum_probs=99.3
Q ss_pred eCcEEEEeeCCC----CceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc
Q 046684 93 IGSFLLLRPINS----TILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY 168 (373)
Q Consensus 93 ~~g~l~~~gg~~----~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~ 168 (373)
.++.+|+..... ....++++|+.+++....-+... ....+++..++ .++|+.+..+
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg---------~~l~v~~~~~--------- 110 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTT---------QTLWFGNTVN--------- 110 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTT---------TEEEEEETTT---------
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCC---------CEEEEEecCC---------
Confidence 345777766421 14679999999887543222111 11233332221 4577766432
Q ss_pred cceEEEEECCCCceeeecCCCcccccc-ceeccCCceEEE-C-CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCc
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVR-LTVWTPNESVCT-R-GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~~~~~~~-~-g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
..+.+||..+++-...-..+...... .........++. + +.+|+........|..+|+++.+-... .+.......
T Consensus 111 -~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~ 188 (353)
T 3vgz_A 111 -SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA-IQNTGKMST 188 (353)
T ss_dssp -TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE-ECCCCTTCC
T ss_pred -CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE-ecCCCCccc
Confidence 37899999887632221111000000 000001112332 3 457776534467899999988765443 231111111
Q ss_pred eeEEEECCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEE
Q 046684 246 ATLVSRNQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMI 324 (373)
Q Consensus 246 ~~~~~~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 324 (373)
.....-+|+ ||+... ...+.+|++.. . +.+..++...... .. ......+...++.+|+.+...+.+.
T Consensus 189 ~~~~s~dg~~l~~~~~--~~~i~~~d~~~----~--~~~~~~~~~~~~~--~~--~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNA--DGELITIDTAD----N--KILSRKKLLDDGK--EH--FFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp CCEEETTTTEEEEECT--TSEEEEEETTT----T--EEEEEEECCCSSS--CC--CEEEEEEETTTTEEEEEESSSSEEE
T ss_pred eEEECCCCCEEEEEcC--CCeEEEEECCC----C--eEEEEEEcCCCCC--Cc--ccceEEECCCCCEEEEEeCCCCEEE
Confidence 112223444 555432 33456666543 2 3333332211000 00 0001233334677888877778899
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||++ ++
T Consensus 257 ~~d~~--~~ 263 (353)
T 3vgz_A 257 VVDTR--NG 263 (353)
T ss_dssp EEETT--TC
T ss_pred EEECC--CC
Confidence 99999 77
No 44
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.42 E-value=0.057 Score=47.58 Aligned_cols=248 Identities=15% Similarity=0.102 Sum_probs=113.5
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEee-CcEEEEeeCCC-CceEE--EEEcCcccceeccCCCCCCCCCCeEEEEE
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSI-GSFLLLRPINS-TILQL--VLCNPFTRQFRYLPLLNVSRTNPAVGIVM 138 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~g~l~~~gg~~-~~~~~--~v~np~t~~w~~lp~~~~~~~~~~~~~~~ 138 (373)
..++.+|+.+.+...+.............+- +..||+.+... ....+ +.+|+.+++.+.+...+.....+.....
T Consensus 29 i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~- 107 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT- 107 (361)
T ss_dssp EEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-
T ss_pred EEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-
Confidence 4555568877777665322222222223334 44577766531 12344 5556766777666544322222222222
Q ss_pred cCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc-eeeecC-------CCccccccceeccCCceEE-ECC
Q 046684 139 EGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-WQIIGS-------MPVEFAVRLTVWTPNESVC-TRG 209 (373)
Q Consensus 139 ~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~-------~p~~~~~~~~~~~~~~~~~-~~g 209 (373)
++ ..+|+....+ ..+.+|+..++. -..+.. -|.+.. ......+.+++ -+|
T Consensus 108 dg---------~~l~~~~~~~----------~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~spdg 166 (361)
T 3scy_A 108 NG---------KNIVTANYSG----------GSITVFPIGQDGALLPASDVIEFKGSGPDKER--QTMPHLHCVRITPDG 166 (361)
T ss_dssp CS---------SEEEEEETTT----------TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT--CSSCCEEEEEECTTS
T ss_pred CC---------CEEEEEECCC----------CEEEEEEeCCCCcCcccceeEEccCCCCCccc--cCCCcceEEEECCCC
Confidence 21 5566654222 457888876432 211110 000000 00000011222 256
Q ss_pred E-EEEEEcCCceEEEEEECCCCc-------EEec----ccCCCCCCCceeEEE-ECCE-EEEEEeecCCceEEEEeecCC
Q 046684 210 M-LYWITSARAYSVIGFDIESNT-------WREL----SAPMADRLEFATLVS-RNQK-LTLIGGTCGGDACVWELSEGG 275 (373)
Q Consensus 210 ~-ly~~gg~~~~~i~~yd~~~~~-------w~~~----~~~~p~~~~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~ 275 (373)
+ +|+. ......+..|+...+. .... ....+....-..++. -+|+ ||+.. .....+.+|+++.
T Consensus 167 ~~l~~~-~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~~~~~v~v~~~~~-- 242 (361)
T 3scy_A 167 KYLLAD-DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN-EIGGTVIAFRYAD-- 242 (361)
T ss_dssp SEEEEE-ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTCEEEEEEEET--
T ss_pred CEEEEE-eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-CCCCeEEEEEecC--
Confidence 5 6666 3445677778776543 2110 011122111122332 3565 55543 3344588999875
Q ss_pred CCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-CccEEEEEccccCCcccEEEeccccc
Q 046684 276 DDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-GLGMIIWREDEDKRKWEWVWVGGCCL 345 (373)
Q Consensus 276 ~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~yd~~~~~~~~~W~~~~~~~~ 345 (373)
.+.+.+..++...... .......+...+..||+.+.. .+.+.+|+.+.+++ +++.+...+.
T Consensus 243 --g~~~~~~~~~~~~~~~-----~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~ 304 (361)
T 3scy_A 243 --GMLDEIQTVAADTVNA-----QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLT 304 (361)
T ss_dssp --TEEEEEEEEESCSSCC-----CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEEC
T ss_pred --CceEEeEEEecCCCCC-----CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecC
Confidence 6666665543211100 000012222235567777766 56788888742266 6666554443
No 45
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.38 E-value=0.0092 Score=50.45 Aligned_cols=151 Identities=11% Similarity=-0.039 Sum_probs=89.6
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
+++|+..|.. ....+.++|..+++=...-.++. .......+..++.+|+.. ...+.+.+||+++
T Consensus 32 g~Lyvstg~~--------~~s~v~~iD~~tg~v~~~i~l~~-------~~fgeGi~~~g~~lyv~t-~~~~~v~viD~~t 95 (266)
T 2iwa_A 32 DTLFESTGLY--------GRSSVRQVALQTGKVENIHKMDD-------SYFGEGLTLLNEKLYQVV-WLKNIGFIYDRRT 95 (266)
T ss_dssp TEEEEEECST--------TTCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEETTEEEEEE-TTCSEEEEEETTT
T ss_pred CeEEEECCCC--------CCCEEEEEECCCCCEEEEEecCC-------CcceEEEEEeCCEEEEEE-ecCCEEEEEECCC
Confidence 6799976532 13679999999987443322321 011123456678999994 5678899999987
Q ss_pred CcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec
Q 046684 230 NTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG 309 (373)
Q Consensus 230 ~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
.+-... .+.+ ...+.+++.-+++||+..+ .. .++.++. .+-+.+..++.....+... ....+...
T Consensus 96 ~~v~~~-i~~g-~~~g~glt~Dg~~l~vs~g---s~-~l~viD~----~t~~v~~~I~Vg~~~~p~~-----~~nele~~ 160 (266)
T 2iwa_A 96 LSNIKN-FTHQ-MKDGWGLATDGKILYGSDG---TS-ILYEIDP----HTFKLIKKHNVKYNGHRVI-----RLNELEYI 160 (266)
T ss_dssp TEEEEE-EECC-SSSCCEEEECSSSEEEECS---SS-EEEEECT----TTCCEEEEEECEETTEECC-----CEEEEEEE
T ss_pred CcEEEE-EECC-CCCeEEEEECCCEEEEECC---CC-eEEEEEC----CCCcEEEEEEECCCCcccc-----cceeEEEE
Confidence 654322 2333 1234455554667887653 22 5666655 4455555555432110000 01222233
Q ss_pred CCEEEEEEcCCccEEEEEccccCC
Q 046684 310 NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 310 ~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
++.||+....++.+.+-|++ ++
T Consensus 161 dg~lyvn~~~~~~V~vID~~--tg 182 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAK--DG 182 (266)
T ss_dssp TTEEEEEETTSSEEEEEETT--TC
T ss_pred CCEEEEecCCCCeEEEEECC--CC
Confidence 78999887777889999999 77
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.37 E-value=0.05 Score=46.19 Aligned_cols=214 Identities=7% Similarity=-0.044 Sum_probs=107.0
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEe-eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSS-IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..+..+|+. .+...+..+........++. .+|.+|+.... ...+.++|+ +++........ .... ...+..++
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~-~~~~-~~~i~~~~- 150 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPN-KGSY-PSFITLGS- 150 (299)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSS-TTCC-EEEEEECT-
T ss_pred CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCC-CCCC-CceEEEcC-
Confidence 456678875 34433332211112223333 36788886542 457899999 66665432211 1111 12222221
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARA 219 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~ 219 (373)
+ +++|+.... ...+.+||. +++.+... .+.. ........+ +|.+|+.. ...
T Consensus 151 --~-----g~l~v~~~~----------~~~i~~~~~-~g~~~~~~-~~~~-------~~~~~~i~~~~~g~l~v~~-~~~ 203 (299)
T 2z2n_A 151 --D-----NALWFTENQ----------NNAIGRITE-SGDITEFK-IPTP-------ASGPVGITKGNDDALWFVE-IIG 203 (299)
T ss_dssp --T-----SCEEEEETT----------TTEEEEECT-TCCEEEEE-CSST-------TCCEEEEEECTTSSEEEEE-TTT
T ss_pred --C-----CCEEEEeCC----------CCEEEEEcC-CCcEEEee-CCCC-------CCcceeEEECCCCCEEEEc-cCC
Confidence 1 678876422 246888998 77766542 1110 011112223 47888773 345
Q ss_pred eEEEEEECCCCcEEecccCCCCCCCc-eeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCC
Q 046684 220 YSVIGFDIESNTWRELSAPMADRLEF-ATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~ 297 (373)
..+..||+ +++...+. .+..... ..++. -+|.||+... ....+.+|++ . .+.... .++....
T Consensus 204 ~~i~~~~~-~g~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~d~-~----g~~~~~-~~~~~~~------ 267 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFK--IPTPNARPHAITAGAGIDLWFTEW-GANKIGRLTS-N----NIIEEY-PIQIKSA------ 267 (299)
T ss_dssp TEEEEECT-TCCEEEEE--CSSTTCCEEEEEECSTTCEEEEET-TTTEEEEEET-T----TEEEEE-ECSSSSC------
T ss_pred ceEEEECC-CCcEEEEE--CCCCCCCceeEEECCCCCEEEecc-CCceEEEECC-C----CceEEE-eCCCCCC------
Confidence 78999999 77776552 2222222 23333 2678887652 2233455554 2 322222 1221110
Q ss_pred CCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 298 KASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+..++..++.||+... .+.+..||++ ++
T Consensus 268 ----~~~~i~~~~g~l~v~~~-~~~l~~~~~~--~~ 296 (299)
T 2z2n_A 268 ----EPHGICFDGETIWFAME-CDKIGKLTLI--KD 296 (299)
T ss_dssp ----CEEEEEECSSCEEEEET-TTEEEEEEEC----
T ss_pred ----ccceEEecCCCEEEEec-CCcEEEEEcC--cc
Confidence 12333337788888764 4679999998 66
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.35 E-value=0.039 Score=46.87 Aligned_cols=215 Identities=10% Similarity=-0.037 Sum_probs=109.4
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..+..+|+. ........+........++ ..+|.+++.... ...+.++|+. ++.+.+.. +.....+ ..+..++
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~-~~~~~~~-~~i~~~~- 108 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA--ANKIGRITKK-GIIKEYTL-PNPDSAP-YGITEGP- 108 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEEC-SSTTCCE-EEEEECT-
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC--CCeEEEECCC-CcEEEEeC-CCcCCCc-eeeEECC-
Confidence 467778888 6665543221122222333 347778887542 3578999986 45544331 1111111 2222221
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCce
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAY 220 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~ 220 (373)
+ +++|+..... ..+.+||. +++...... +.. .......+.- +|.+|+.. ....
T Consensus 109 --~-----g~l~v~~~~~----------~~i~~~d~-~g~~~~~~~-~~~------~~~~~~i~~~~~g~l~v~~-~~~~ 162 (299)
T 2z2n_A 109 --N-----GDIWFTEMNG----------NRIGRITD-DGKIREYEL-PNK------GSYPSFITLGSDNALWFTE-NQNN 162 (299)
T ss_dssp --T-----SCEEEEETTT----------TEEEEECT-TCCEEEEEC-SST------TCCEEEEEECTTSCEEEEE-TTTT
T ss_pred --C-----CCEEEEecCC----------ceEEEECC-CCCEEEecC-CCC------CCCCceEEEcCCCCEEEEe-CCCC
Confidence 1 6788765322 35788888 665554321 100 0011122222 57888863 3456
Q ss_pred EEEEEECCCCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCC
Q 046684 221 SVIGFDIESNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKA 299 (373)
Q Consensus 221 ~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~ 299 (373)
.+..||+ +++...+..+... ..-..++.. +|.||+... ....+.+|++ . .+.... .++...
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~-~----g~~~~~-~~~~~~--------- 224 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPA-SGPVGITKGNDDALWFVEI-IGNKIGRITT-S----GEITEF-KIPTPN--------- 224 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTT-CCEEEEEECTTSSEEEEET-TTTEEEEECT-T----CCEEEE-ECSSTT---------
T ss_pred EEEEEcC-CCcEEEeeCCCCC-CcceeEEECCCCCEEEEcc-CCceEEEECC-C----CcEEEE-ECCCCC---------
Confidence 8999999 7777654222111 111233332 578887653 2233555555 3 444432 222111
Q ss_pred CCCceEEEe-cCCEEEEEEcCCccEEEEEcc
Q 046684 300 SWGGTRCAA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 300 ~~~~~~~~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++. .++.||+.....+.+..||++
T Consensus 225 -~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 225 -ARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -CCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred -CCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 01233433 367888877566689999986
No 48
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.34 E-value=0.029 Score=49.20 Aligned_cols=195 Identities=9% Similarity=0.046 Sum_probs=97.7
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeec
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIG 186 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 186 (373)
-.++.+|+.+++.+.+....... .+....+. +++++|+.+... ....+.+||..+++++.+.
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~-~p~~~a~s---------pdg~l~~~~~~~--------~~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQ-NPTYLALS---------AKDCLYSVDKED--------DEGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECS-CCCCEEEC---------TTCEEEEEEEET--------TEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccC-CcceEEEc---------cCCeEEEEEecC--------CCceEEEEEecCCcEEEee
Confidence 35778889888876643322211 11222222 116688775321 1256899999888877665
Q ss_pred CCCccccccceeccCCceEEE-CCE-EEEEEcCCceEEEEEECC-CCcEEecccCCCC------C---CCcee-EEE-EC
Q 046684 187 SMPVEFAVRLTVWTPNESVCT-RGM-LYWITSARAYSVIGFDIE-SNTWRELSAPMAD------R---LEFAT-LVS-RN 252 (373)
Q Consensus 187 ~~p~~~~~~~~~~~~~~~~~~-~g~-ly~~gg~~~~~i~~yd~~-~~~w~~~~~~~p~------~---~~~~~-~~~-~~ 252 (373)
.... .......+++- +|+ +|+. ......+..||+. +++...+ ...+. . ..... ++. -+
T Consensus 80 ~~~~------~~~~p~~~a~spdg~~l~~~-~~~~~~v~v~~~~~~g~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 80 TVVA------PGTPPAYVAVDEARQLVYSA-NYHKGTAEVMKIAADGALTLT-DTVQHSGHGPRPEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EEEE------ESCCCSEEEEETTTTEEEEE-ETTTTEEEEEEECTTSCEEEE-EEEECCCCCSSTTCSSCCEEEEEECTT
T ss_pred eeec------CCCCCEEEEECCCCCEEEEE-eCCCCEEEEEEeCCCCCeeec-ceeecCCCCCCccccCCCceEEEECCC
Confidence 4311 11112222332 454 6665 3445678888885 3344333 11111 0 01122 222 36
Q ss_pred CEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccC
Q 046684 253 QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDK 332 (373)
Q Consensus 253 g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~ 332 (373)
|++|+.. .....+.+|+++. +.+...+......... ......+...|..+|+.+...+.+.+|+.+.++
T Consensus 152 g~l~v~~-~~~~~v~~~~~~~---~g~~~~~~~~~~~~g~-------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 152 NRLAVID-LGSDKVYVYNVSD---AGQLSEQSVLTMEAGF-------GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp SCEEEEE-TTTTEEEEEEECT---TSCEEEEEEEECCTTC-------CEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CcEEEEe-CCCCEEEEEEECC---CCcEEEeeeEEcCCCC-------CCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 7755543 3444578999873 2555555433221110 000122222345688887777778888877223
Q ss_pred CcccEEEe
Q 046684 333 RKWEWVWV 340 (373)
Q Consensus 333 ~~~~W~~~ 340 (373)
+ +++.+
T Consensus 221 g--~~~~~ 226 (347)
T 3hfq_A 221 G--AFTQL 226 (347)
T ss_dssp T--EEEEE
T ss_pred C--ceEEe
Confidence 6 55444
No 49
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.33 E-value=0.059 Score=45.78 Aligned_cols=211 Identities=6% Similarity=-0.004 Sum_probs=106.9
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..+..||+. .+...+..+........++ ..+|.+|+.... ...+.++|+. ++...... +.....+ ..+..++
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~-~~~~~~~-~~i~~d~- 155 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN--GDRIGKLTAD-GTIYEYDL-PNKGSYP-AFITLGS- 155 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT--TTEEEEECTT-SCEEEEEC-SSTTCCE-EEEEECT-
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC--CCeEEEECCC-CCEEEccC-CCCCCCc-eeEEECC-
Confidence 457778887 5554443221112222333 337788887642 3578999998 66554321 1111112 2222221
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARA 219 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~ 219 (373)
+ +++|+..... ..+.+||. +++..... .+.. ......+.+ +|.+|+.. ...
T Consensus 156 --~-----g~l~v~~~~~----------~~i~~~~~-~g~~~~~~-~~~~-------~~~~~~i~~d~~g~l~v~~-~~~ 208 (300)
T 2qc5_A 156 --D-----NALWFTENQN----------NSIGRITN-TGKLEEYP-LPTN-------AAAPVGITSGNDGALWFVE-IMG 208 (300)
T ss_dssp --T-----SSEEEEETTT----------TEEEEECT-TCCEEEEE-CSST-------TCCEEEEEECTTSSEEEEE-TTT
T ss_pred --C-----CCEEEEecCC----------CeEEEECC-CCcEEEee-CCCC-------CCCcceEEECCCCCEEEEc-cCC
Confidence 1 5688765221 35888988 66665542 2111 011112333 57888873 345
Q ss_pred eEEEEEECCCCcEEecccCCCCCCCc-eeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCC
Q 046684 220 YSVIGFDIESNTWRELSAPMADRLEF-ATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~ 297 (373)
..|..||+ ++++..... +..... ..++. -+|.||+.... ...+.++++ . .+.... .++....
T Consensus 209 ~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~-~----g~~~~~-~~~~~~~------ 272 (300)
T 2qc5_A 209 NKIGRITT-TGEISEYDI--PTPNARPHAITAGKNSEIWFTEWG-ANQIGRITN-D----NTIQEY-QLQTENA------ 272 (300)
T ss_dssp TEEEEECT-TCCEEEEEC--SSTTCCEEEEEECSTTCEEEEETT-TTEEEEECT-T----SCEEEE-ECCSTTC------
T ss_pred CEEEEEcC-CCcEEEEEC--CCCCCCceEEEECCCCCEEEeccC-CCeEEEECC-C----CcEEEE-ECCccCC------
Confidence 67999999 666665522 221222 23333 26788887532 223444444 1 344332 2331111
Q ss_pred CCCCCceEEE-ecCCEEEEEEcCCccEEEEEcc
Q 046684 298 KASWGGTRCA-AGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 298 ~~~~~~~~~~-~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.+..++ ..++.||+... . .+..||++
T Consensus 273 ----~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 273 ----EPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp ----CCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ----ccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 123333 34678888766 5 89999986
No 50
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.32 E-value=7e-05 Score=71.72 Aligned_cols=35 Identities=23% Similarity=0.484 Sum_probs=29.4
Q ss_pred CCCcchHHHHHHHHhcCC-hhhHHHhhcccccchhc
Q 046684 1 MWSNLHLDVLANIFSFLS-PDSLARAKSVCSHWHTC 35 (373)
Q Consensus 1 ~~~~Lp~dll~~Il~rLP-~~~l~r~r~Vck~W~~l 35 (373)
+|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 589999999999999999 99999999999999988
No 51
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.26 E-value=0.029 Score=50.90 Aligned_cols=225 Identities=12% Similarity=0.011 Sum_probs=109.4
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeE-EeeCc-EEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPV-SSIGS-FLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~-~~~~g-~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..+..+|.....-..+... ......+ -+.+| .|+..+.......++++|..+++.+.+...+. ........+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~----~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR----HNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS----CEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCC--CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC----cccCEEEcC
Confidence 6788888765544433211 1111122 23344 44444432234689999999988766543322 112222222
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCE-EEEEEc-C
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGM-LYWITS-A 217 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~-ly~~gg-~ 217 (373)
.+ .+|++.+..+ ....++++|..+++.+.+...+. .....++ -+|+ |++... .
T Consensus 233 dg-------~~la~~~~~~--------g~~~i~~~d~~~~~~~~l~~~~~---------~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 233 DG-------SKLAFALSKT--------GSLNLYVMDLASGQIRQVTDGRS---------NNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp TS-------SEEEEEECTT--------SSCEEEEEETTTCCEEECCCCSS---------CEEEEEECTTSSEEEEEECTT
T ss_pred CC-------CEEEEEEecC--------CCceEEEEECCCCCEEeCcCCCC---------cccceEECCCCCEEEEEECCC
Confidence 11 3455454322 13579999998887665544321 0011122 2455 444432 1
Q ss_pred CceEEEEEECCCCcEEecccCCCCCCCceeEE-EECCEEEEEEeecCC--ceEEEEeecCCCCCCeEEEEeechhhhhhh
Q 046684 218 RAYSVIGFDIESNTWRELSAPMADRLEFATLV-SRNQKLTLIGGTCGG--DACVWELSEGGDDDIWCLIEKVPIEMGMRL 294 (373)
Q Consensus 218 ~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~-~~~g~l~~~gg~~~~--~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~ 294 (373)
....|+.+|+.+++-..+ .. ... ....+. .-+|+..++...... .+.+|+++. .....+..-. . .
T Consensus 289 g~~~i~~~d~~~~~~~~l-~~-~~~-~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~----~~~~~l~~~~--~-~-- 356 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQRI-TW-EGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT----GGVQVLSSTF--L-D-- 356 (415)
T ss_dssp SSCEEEEEETTSSCCEEC-CC-SSS-EEEEEEECTTSSEEEEEEECSSCEEEEEEETTT----CCEEECCCSS--S-C--
T ss_pred CCcEEEEEECCCCCEEEE-ec-CCC-cccCeEECCCCCEEEEEECcCCceEEEEEECCC----CCEEEecCCC--C-c--
Confidence 234799999988775554 11 111 111122 236665555544322 356666644 5443322111 0 0
Q ss_pred cCCCCCCCceEEEec-CCEEEEEEcCC--ccEEEEEccccCCcccEEEec
Q 046684 295 SGGKASWGGTRCAAG-NGAICLYREVG--LGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~-~~~i~~~~~~~--~~~~~yd~~~~~~~~~W~~~~ 341 (373)
....... +..|++.+... ..++.+|++ .+ ..+.++
T Consensus 357 --------~~~~~spdg~~l~~~s~~~~~~~l~~~d~~--g~--~~~~l~ 394 (415)
T 2hqs_A 357 --------ETPSLAPNGTMVIYSSSQGMGSVLNLVSTD--GR--FKARLP 394 (415)
T ss_dssp --------EEEEECTTSSEEEEEEEETTEEEEEEEETT--SC--CEEECC
T ss_pred --------CCeEEcCCCCEEEEEEcCCCccEEEEEECC--CC--cEEEee
Confidence 1222333 44555544332 269999998 77 655554
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.035 Score=48.91 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=77.0
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEE-C--CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCc-
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-R--GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEF- 245 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~--g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~- 245 (373)
..+.+||..+++|..+..... ....-..+++. + +.+.+.+ .....|..||+.+..-... .........
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~-~~~~~~~~~v 150 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAV------HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSP-IIIDAHAIGV 150 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECC------CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCE-EEEECCTTCE
T ss_pred CEEEEEEcCCCceeEeeeecC------CCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceee-EEecCCCCce
Confidence 358899999988766654421 00011111222 2 4455553 4567889999887632211 111111111
Q ss_pred eeEEEE--------------CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecC-
Q 046684 246 ATLVSR--------------NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGN- 310 (373)
Q Consensus 246 ~~~~~~--------------~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~- 310 (373)
..+... ++.+++.++. +..+.+|++.. ....+..+..+...... ....+...+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~~~~~~~~~h~~~---------v~~~~~sp~~ 218 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNS--DAQTYVLESTLEGHSDW---------VRDVAWSPTV 218 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEET-TSCEEEEEEET--TTTEEEEEEEECCCSSC---------EEEEEECCCC
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecC--CCcceeeEEEEecccCc---------EeEEEECCCC
Confidence 122222 3666666654 44589999987 55567776665432110 012222234
Q ss_pred --CEEEEEEcCCccEEEEEccccCC
Q 046684 311 --GAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 311 --~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+.+++.++..+.+.+||.+ +.
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~--~~ 241 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQD--NE 241 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEES--ST
T ss_pred CCCCeEEEEeCCCEEEEEeCC--CC
Confidence 6888888888889999999 65
No 53
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.20 E-value=0.092 Score=45.43 Aligned_cols=210 Identities=7% Similarity=0.029 Sum_probs=99.5
Q ss_pred eCcEEEEeeCCCCceEEEEEcCc--ccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 93 IGSFLLLRPINSTILQLVLCNPF--TRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~--t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
.+..+++.+.. ...+.+|+.. +++++.+...+.......++ .. +.+ ..+|+.+..+ .
T Consensus 48 dg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s-~dg-------~~l~~~~~~~----------~ 106 (343)
T 1ri6_A 48 DKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESALPGSLTHIS-TD-HQG-------QFVFVGSYNA----------G 106 (343)
T ss_dssp TSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEECSSCCSEEE-EC-TTS-------SEEEEEETTT----------T
T ss_pred CCCEEEEeecC--CCeEEEEEecCCCCceeeccccccCCCCcEEE-Ec-CCC-------CEEEEEecCC----------C
Confidence 34557776653 2566666654 77776554433222222222 21 111 4466655322 3
Q ss_pred eEEEEECCCCc-eeeecCCCccccccceeccCCceEEE-CC-EEEEEEcCCceEEEEEECCC-CcEEecc---cCCCCCC
Q 046684 171 MVEMYDSRHDA-WQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSARAYSVIGFDIES-NTWRELS---APMADRL 243 (373)
Q Consensus 171 ~~~~yd~~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~~i~~yd~~~-~~w~~~~---~~~p~~~ 243 (373)
.+.+||...+. .+.+...+. ......+++. +| .+|+. ......+..||+.+ ++...+. ...+...
T Consensus 107 ~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~-~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 107 NVSVTRLEDGLPVGVVDVVEG-------LDGCHSANISPDNRTLWVP-ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EEEEEEEETTEEEEEEEEECC-------CTTBCCCEECTTSSEEEEE-EGGGTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred eEEEEECCCCccccccccccC-------CCCceEEEECCCCCEEEEe-cCCCCEEEEEEecCCCceeeecccccccCCCC
Confidence 57788774222 222222210 0011222332 34 46655 33456799999987 6665331 1112111
Q ss_pred CceeEEE-ECCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEee---chhhhhhhcCCCCCCCceEEEe--cCCEEEEE
Q 046684 244 EFATLVS-RNQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKV---PIEMGMRLSGGKASWGGTRCAA--GNGAICLY 316 (373)
Q Consensus 244 ~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~---p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~ 316 (373)
.-..++. -+|+ ||+.+ .....+.+|+++. .+..++.+... +..... ......+.. .+..||+.
T Consensus 179 ~~~~~~~~pdg~~l~~~~-~~~~~i~~~~~~~--~~g~~~~~~~~~~~~~~~~~-------~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVN-ELNSSVDVWELKD--PHGNIECVQTLDMMPENFSD-------TRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-TTTTEEEEEESSC--TTSCCEEEEEEECSCTTCCS-------CCCEEEEEECTTSSEEEEE
T ss_pred CcceEEECCCCCEEEEEe-CCCCEEEEEEecC--CCCcEEEEeeccccCccccc-------cCCccceEECCCCCEEEEE
Confidence 1112222 2555 55544 3444588999965 44566544332 221000 000112222 34578777
Q ss_pred EcCCccEEEEEccccCCcccEEEeccc
Q 046684 317 REVGLGMIIWREDEDKRKWEWVWVGGC 343 (373)
Q Consensus 317 ~~~~~~~~~yd~~~~~~~~~W~~~~~~ 343 (373)
+...+.+.+||++.+++ +++.+...
T Consensus 249 ~~~~~~i~v~d~~~~~~--~~~~~~~~ 273 (343)
T 1ri6_A 249 DRTASLITVFSVSEDGS--VLSKEGFQ 273 (343)
T ss_dssp ETTTTEEEEEEECTTSC--CEEEEEEE
T ss_pred ecCCCEEEEEEEcCCCC--ceEEeeee
Confidence 76677899999873334 45555443
No 54
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.20 E-value=0.028 Score=47.45 Aligned_cols=230 Identities=11% Similarity=-0.025 Sum_probs=110.5
Q ss_pred CCeeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcc-cceeccCCCCCCCCCCeEEEEEc
Q 046684 61 RGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFT-RQFRYLPLLNVSRTNPAVGIVME 139 (373)
Q Consensus 61 ~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t-~~w~~lp~~~~~~~~~~~~~~~~ 139 (373)
....++.+|..++....+...... ......+.+|..++.++ ...++++|..+ ++...+...........+.+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~-v~~~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s-- 93 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPEL-FEAPNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS-- 93 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSC-CEEEEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC--
T ss_pred cceeEEEEeCCCCceeeeccCCcc-eEeeEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEEC--
Confidence 346777888877765544221111 11112233554444444 46899999999 777665433221111122221
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCE-EEEEEc-
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGM-LYWITS- 216 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~-ly~~gg- 216 (373)
+ +++.++++... ......++.++..++.-+.+.... . ....++. +|. +++.+.
T Consensus 94 p--------dg~~l~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~-------~---~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 94 P--------DGALYAISDKV------EFGKSAIYLLPSTGGTPRLMTKNL-------P---SYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp T--------TSSEEEEEECT------TTSSCEEEEEETTCCCCEECCSSS-------S---EEEEEECTTSSEEEEEEEE
T ss_pred C--------CCCEEEEEEeC------CCCcceEEEEECCCCceEEeecCC-------C---ccceEECCCCCEEEEEECC
Confidence 1 14444444321 113467888888777655444321 0 0111221 444 444432
Q ss_pred CCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhc
Q 046684 217 ARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLS 295 (373)
Q Consensus 217 ~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~ 295 (373)
.....++.+|..+++...+ ...+... ..+.. -+|+.+++.+.....+.+|.++. .......+........
T Consensus 150 ~~~~~l~~~~~~~~~~~~~-~~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~---- 220 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVETRL-THGEGRN--DGPDYSPDGRWIYFNSSRTGQMQIWRVRV--DGSSVERITDSAYGDW---- 220 (297)
T ss_dssp TTEEEEEEEETTTCCEEEC-CCSSSCE--EEEEECTTSSEEEEEECTTSSCEEEEEET--TSSCEEECCCCSEEEE----
T ss_pred CCceEEEEEECCCCcceEc-ccCCCcc--ccceECCCCCEEEEEecCCCCccEEEECC--CCCCcEEEecCCcccC----
Confidence 2234677777877776665 2222111 12222 25665555444344568999875 3344333322111100
Q ss_pred CCCCCCCceEEEecCCEEEEEEcC----------CccEEEEEccccCCcccEEEe
Q 046684 296 GGKASWGGTRCAAGNGAICLYREV----------GLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~yd~~~~~~~~~W~~~ 340 (373)
.......+..|++.... ...+.+||++ ++ +...+
T Consensus 221 -------~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~--~~--~~~~~ 264 (297)
T 2ojh_A 221 -------FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD--GG--NVETL 264 (297)
T ss_dssp -------EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT--SC--SCEEE
T ss_pred -------CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC--CC--Cceee
Confidence 12222234455555432 2469999999 77 55444
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.17 E-value=0.12 Score=46.24 Aligned_cols=198 Identities=8% Similarity=0.006 Sum_probs=95.2
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceec-----cCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRY-----LPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY 168 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~-----lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~ 168 (373)
++.+++.++. ...+.+||..++.... +..+..... ...++...+.+ .++++.|+.+
T Consensus 93 ~~~~l~s~s~--dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~-------~~~l~s~~~d--------- 153 (402)
T 2aq5_A 93 NDNVIASGSE--DCTVMVWEIPDGGLVLPLREPVITLEGHTK-RVGIVAWHPTA-------QNVLLSAGCD--------- 153 (402)
T ss_dssp CTTEEEEEET--TSEEEEEECCTTCCSSCBCSCSEEEECCSS-CEEEEEECSSB-------TTEEEEEETT---------
T ss_pred CCCEEEEEeC--CCeEEEEEccCCCCccccCCceEEecCCCC-eEEEEEECcCC-------CCEEEEEcCC---------
Confidence 4444444443 4679999998875422 111111111 11122222211 1466666554
Q ss_pred cceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEeccc-CCCCCC-Cc
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSA-PMADRL-EF 245 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~-~~p~~~-~~ 245 (373)
..+.+||..+++....-... .....-..+++. +|.+.+.+ ...+.|..||+.+++-... . ...... ..
T Consensus 154 -g~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~ 224 (402)
T 2aq5_A 154 -NVILVWDVGTGAAVLTLGPD------VHPDTIYSVDWSRDGALICTS-CRDKRVRVIEPRKGTVVAE-KDRPHEGTRPV 224 (402)
T ss_dssp -SCEEEEETTTTEEEEEECTT------TCCSCEEEEEECTTSSCEEEE-ETTSEEEEEETTTTEEEEE-EECSSCSSSCC
T ss_pred -CEEEEEECCCCCccEEEecC------CCCCceEEEEECCCCCEEEEE-ecCCcEEEEeCCCCceeee-eccCCCCCcce
Confidence 35899999887643222100 000001111222 46555553 3467899999988765433 2 111111 11
Q ss_pred eeEEEECCEEEEEEe--ecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccE
Q 046684 246 ATLVSRNQKLTLIGG--TCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGM 323 (373)
Q Consensus 246 ~~~~~~~g~l~~~gg--~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
.....-+|++++++. ..+..+.+|++.. ....-. ...+.... ..........+..+++.+...+.+
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~--~~~~~~-~~~~~~~~---------~v~~~~~s~~~~~l~~~g~~dg~i 292 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKH--LEEPLS-LQELDTSS---------GVLLPFFDPDTNIVYLCGKGDSSI 292 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTB--CSSCSE-EEECCCCS---------SCEEEEEETTTTEEEEEETTCSCE
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCcc--ccCCce-EEeccCCC---------ceeEEEEcCCCCEEEEEEcCCCeE
Confidence 222223677666653 2333488999865 111111 11221110 000122233456677777677789
Q ss_pred EEEEccccCC
Q 046684 324 IIWREDEDKR 333 (373)
Q Consensus 324 ~~yd~~~~~~ 333 (373)
.+||.+ ++
T Consensus 293 ~i~d~~--~~ 300 (402)
T 2aq5_A 293 RYFEIT--SE 300 (402)
T ss_dssp EEEEEC--SS
T ss_pred EEEEec--CC
Confidence 999999 77
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.17 E-value=0.06 Score=45.70 Aligned_cols=213 Identities=10% Similarity=-0.017 Sum_probs=109.2
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..+..||+. .+...+..+.....-..++ ..+|.+|+.... ...+.++|+. ++...+...... ..+. .+..++
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~v~~~d~~-g~~~~~~~~~~~-~~~~-~i~~~~- 113 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG--ANKIGKLSKK-GGFTEYPLPQPD-SGPY-GITEGL- 113 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSSTT-CCEE-EEEECS-
T ss_pred CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC--CCeEEEECCC-CCeEEecCCCCC-CCCc-cceECC-
Confidence 467778887 6555443322111222233 346778886542 4579999998 666543221111 1122 222221
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARA 219 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~ 219 (373)
+ +++|+..... ..+..||.. ++.+... .+.. . ........ +|.+|+.. ...
T Consensus 114 --~-----g~l~v~~~~~----------~~i~~~~~~-g~~~~~~-~~~~------~-~~~~~i~~d~~g~l~v~~-~~~ 166 (300)
T 2qc5_A 114 --N-----GDIWFTQLNG----------DRIGKLTAD-GTIYEYD-LPNK------G-SYPAFITLGSDNALWFTE-NQN 166 (300)
T ss_dssp --T-----TCEEEEETTT----------TEEEEECTT-SCEEEEE-CSST------T-CCEEEEEECTTSSEEEEE-TTT
T ss_pred --C-----CCEEEEccCC----------CeEEEECCC-CCEEEcc-CCCC------C-CCceeEEECCCCCEEEEe-cCC
Confidence 1 6788765322 357888887 5555332 1110 0 11112223 57888773 345
Q ss_pred eEEEEEECCCCcEEecccCCCCCCCc-eeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCC
Q 046684 220 YSVIGFDIESNTWRELSAPMADRLEF-ATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~ 297 (373)
..|..||+ +++...+. .+..... ..++.- +|.||+.... ...+.++++ . ...... .++...
T Consensus 167 ~~i~~~~~-~g~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~-~----g~~~~~-~~~~~~------- 229 (300)
T 2qc5_A 167 NSIGRITN-TGKLEEYP--LPTNAAAPVGITSGNDGALWFVEIM-GNKIGRITT-T----GEISEY-DIPTPN------- 229 (300)
T ss_dssp TEEEEECT-TCCEEEEE--CSSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT-T----CCEEEE-ECSSTT-------
T ss_pred CeEEEECC-CCcEEEee--CCCCCCCcceEEECCCCCEEEEccC-CCEEEEEcC-C----CcEEEE-ECCCCC-------
Confidence 68999999 66666552 2222222 233332 6788886532 223444444 2 444443 222111
Q ss_pred CCCCCceEEEe-cCCEEEEEEcCCccEEEEEcc
Q 046684 298 KASWGGTRCAA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 298 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++. .++.||+.....+.+..||++
T Consensus 230 ---~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 230 ---ARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp ---CCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred ---CCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 01233443 367899987666789999986
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.16 E-value=0.11 Score=45.64 Aligned_cols=117 Identities=9% Similarity=0.046 Sum_probs=65.1
Q ss_pred CCE-EEEEEcCCceEEEEEECCCCcEEecc--cCCCCCCCce-eEEE-ECCEEEEEEeec-CCceEEEEeecCCCCCCeE
Q 046684 208 RGM-LYWITSARAYSVIGFDIESNTWRELS--APMADRLEFA-TLVS-RNQKLTLIGGTC-GGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 208 ~g~-ly~~gg~~~~~i~~yd~~~~~w~~~~--~~~p~~~~~~-~~~~-~~g~l~~~gg~~-~~~~~i~~~~~~~~~~~W~ 281 (373)
+|+ +|+. ......|..||+.+++...+. ...+...... .++. -+|+..++.... ...+.+|+++. .+.+++
T Consensus 221 dg~~l~v~-~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~--~~g~~~ 297 (361)
T 3scy_A 221 DGKFAYLI-NEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE--TNGTLT 297 (361)
T ss_dssp TSSEEEEE-ETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT--TTCCEE
T ss_pred CCCEEEEE-cCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC--CCCcEE
Confidence 464 6666 445678999999887765441 1112211112 2322 266643344344 45589999975 557788
Q ss_pred EEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEE--EccccCCcccEEEe
Q 046684 282 LIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIW--REDEDKRKWEWVWV 340 (373)
Q Consensus 282 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~y--d~~~~~~~~~W~~~ 340 (373)
.+..++..... ....+...+..||+.+...+.+.+| |++ ++ +-+.+
T Consensus 298 ~~~~~~~g~~~---------~~~~~spdg~~l~~~~~~~~~v~v~~~d~~--~g--~~~~~ 345 (361)
T 3scy_A 298 KVGYQLTGIHP---------RNFIITPNGKYLLVACRDTNVIQIFERDQA--TG--LLTDI 345 (361)
T ss_dssp EEEEEECSSCC---------CEEEECTTSCEEEEEETTTTEEEEEEECTT--TC--CEEEC
T ss_pred EeeEecCCCCC---------ceEEECCCCCEEEEEECCCCCEEEEEEECC--CC--cEeec
Confidence 87776642111 1233333455688777566667775 555 77 55444
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.13 E-value=0.059 Score=48.40 Aligned_cols=194 Identities=10% Similarity=0.049 Sum_probs=97.9
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCccc
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYE 169 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~ 169 (373)
+...+..++..+. ...+.+||..+..-.. ..+..... ...++...+ + ++.++.|+.+
T Consensus 182 ~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~-~~~~~~~~-~v~~~~~~~---~-----~~~l~s~~~d---------- 238 (401)
T 4aez_A 182 LSWNRHVLSSGSR---SGAIHHHDVRIANHQI-GTLQGHSS-EVCGLAWRS---D-----GLQLASGGND---------- 238 (401)
T ss_dssp EEEETTEEEEEET---TSEEEEEETTSSSCEE-EEEECCSS-CEEEEEECT---T-----SSEEEEEETT----------
T ss_pred EEECCCEEEEEcC---CCCEEEEecccCccee-eEEcCCCC-CeeEEEEcC---C-----CCEEEEEeCC----------
Confidence 4444554444444 5778899987533211 11111111 111222221 1 5566666554
Q ss_pred ceEEEEECCCCceee-ecCCCccccccceeccCCceEEE--CCEEEEEE-cCCceEEEEEECCCCcEEecccCCCCCCCc
Q 046684 170 SMVEMYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVCT--RGMLYWIT-SARAYSVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~g-g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
..+.+||..++.=.. +... ...-..+++. +..+.+.+ |.....+..||..+++-... .... ..-
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~---------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~-~~~~--~~v 306 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNH---------NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT-VDAG--SQV 306 (401)
T ss_dssp SCEEEEETTCSSEEEEECCC---------SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE-EECS--SCE
T ss_pred CeEEEccCCCCCccEEecCC---------cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE-EeCC--CcE
Confidence 368899987754221 1111 0111122332 23566665 33578899999987765433 2211 111
Q ss_pred eeEEE-ECCEEEEE-EeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccE
Q 046684 246 ATLVS-RNQKLTLI-GGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGM 323 (373)
Q Consensus 246 ~~~~~-~~g~l~~~-gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
..+.. -+++.+++ +|..+..+.+|++.. .....+..++..... ........++..++.++.++.+
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~~~---------v~~~~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHDTR---------VLYSALSPDGRILSTAASDENL 373 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCSSC---------CCEEEECTTSSEEEEECTTSEE
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCCCC---------EEEEEECCCCCEEEEEeCCCcE
Confidence 12222 24444444 355556689999976 556665554321110 0233334466677777777889
Q ss_pred EEEEccccCC
Q 046684 324 IIWREDEDKR 333 (373)
Q Consensus 324 ~~yd~~~~~~ 333 (373)
.+||+. ++
T Consensus 374 ~iw~~~--~~ 381 (401)
T 4aez_A 374 KFWRVY--DG 381 (401)
T ss_dssp EEEECC--C-
T ss_pred EEEECC--CC
Confidence 999999 76
No 59
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.11 E-value=0.014 Score=51.74 Aligned_cols=193 Identities=8% Similarity=-0.012 Sum_probs=87.8
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeE-EEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAV-GIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~-~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
+.++.++..+. ...+.+||..+++-..+...........+ ++...+ +++.++.|+.+ .
T Consensus 103 s~d~~~l~~s~---dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp--------dg~~l~sgs~d----------g 161 (357)
T 4g56_B 103 VSEKGILVASD---SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS--------DGTQAVSGGKD----------F 161 (357)
T ss_dssp ETTTEEEEEET---TSCEEEC--------CCCCEEECCCSSCEEEEEECS--------SSSEEEEEETT----------S
T ss_pred cCCCCEEEEEC---CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC--------CCCEEEEEeCC----------C
Confidence 34666666554 46789999988765443322211111112 222211 15566666554 3
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL 248 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~ 248 (373)
.+.+||..+++-...-... .. .-..+++. ++ .+++.+ .....|..+|+.+.+-... ............
T Consensus 162 ~v~iwd~~~~~~~~~~~~h-------~~-~v~~v~~s~~~~~~~~s~-~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~ 231 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAH-------SS-EVNCVAACPGKDTIFLSC-GEDGRILLWDTRKPKPATR-IDFCASDTIPTS 231 (357)
T ss_dssp CEEEEETTTTEEEEEECCC-------SS-CEEEEEECTTCSSCEEEE-ETTSCEEECCTTSSSCBCB-CCCTTCCSCEEE
T ss_pred eEEEEECCCCcEEEEEcCC-------CC-CEEEEEEccCCCceeeee-ccCCceEEEECCCCceeee-eeeccccccccc
Confidence 5889998876532221110 00 00111221 23 344443 3456788899887654333 222222222222
Q ss_pred EEE---CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEE-ecCCEEEEEEcCCccEE
Q 046684 249 VSR---NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCA-AGNGAICLYREVGLGMI 324 (373)
Q Consensus 249 ~~~---~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 324 (373)
+.. ++.+++.++ .+..+.+|++.. .+ .+..+..... .. ...++ ..++.+++.++.++.+.
T Consensus 232 v~~sp~~~~~la~g~-~d~~i~~wd~~~----~~--~~~~~~~~~~--------~v-~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 232 VTWHPEKDDTFACGD-ETGNVSLVNIKN----PD--SAQTSAVHSQ--------NI-TGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp EEECTTSTTEEEEEE-SSSCEEEEESSC----GG--GCEEECCCSS--------CE-EEEEECSSSSCCEEEEETTSCEE
T ss_pred hhhhhcccceEEEee-cccceeEEECCC----Cc--EeEEEeccce--------eE-EEEEEcCCCCCEEEEEeCCCEEE
Confidence 332 355665554 444579999865 21 1112211000 00 11122 23456777777777899
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||.+ ++
T Consensus 296 iwd~~--~~ 302 (357)
T 4g56_B 296 VLDAD--FS 302 (357)
T ss_dssp EECTT--SC
T ss_pred EEECC--CC
Confidence 99999 88
No 60
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.10 E-value=0.021 Score=49.55 Aligned_cols=190 Identities=8% Similarity=0.041 Sum_probs=99.1
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
...+.+|+.... ...+.++|+.+++....-..+ .... .+...+.+ ..+|+.+... ..
T Consensus 7 ~~~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~--~~~~s~dg-------~~l~~~~~~~----------~~ 63 (331)
T 3u4y_A 7 TTSNFGIVVEQH--LRRISFFSTDTLEILNQITLG--YDFV--DTAITSDC-------SNVVVTSDFC----------QT 63 (331)
T ss_dssp CCCCEEEEEEGG--GTEEEEEETTTCCEEEEEECC--CCEE--EEEECSSS-------CEEEEEESTT----------CE
T ss_pred CCCCEEEEEecC--CCeEEEEeCcccceeeeEEcc--CCcc--eEEEcCCC-------CEEEEEeCCC----------Ce
Confidence 345677776653 468999999998875532222 1112 22221111 4577765432 37
Q ss_pred EEEEECCCCce-eeecCCCccccccceeccCCc-eEEE-CC-EEEEEEcCCce--EEEEEECCCCcEEecccCCCCCCCc
Q 046684 172 VEMYDSRHDAW-QIIGSMPVEFAVRLTVWTPNE-SVCT-RG-MLYWITSARAY--SVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 172 ~~~yd~~~~~W-~~~~~~p~~~~~~~~~~~~~~-~~~~-~g-~ly~~gg~~~~--~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
+.++|..+++- ...... ...... .++. +| .+| ....... .|..+|+++++.... .+... ..
T Consensus 64 i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~-~~~~~--~~ 130 (331)
T 3u4y_A 64 LVQIETQLEPPKVVAIQE---------GQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFIST-IPIPY--DA 130 (331)
T ss_dssp EEEEECSSSSCEEEEEEE---------CSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEE-EECCT--TE
T ss_pred EEEEECCCCceeEEeccc---------CCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEE-EECCC--Cc
Confidence 89999988764 111111 011112 2222 34 456 4322223 899999998876543 22211 11
Q ss_pred eeEEEE-CCE-EEEEEeecCCc-eEEEEeecCCCCCCeEE-EEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcC
Q 046684 246 ATLVSR-NQK-LTLIGGTCGGD-ACVWELSEGGDDDIWCL-IEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREV 319 (373)
Q Consensus 246 ~~~~~~-~g~-l~~~gg~~~~~-~~i~~~~~~~~~~~W~~-v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 319 (373)
..++.. +|+ ||+.+. .... +.+|+++. +...... ...++.... +..+.. .+..+|+.+..
T Consensus 131 ~~~~~spdg~~l~~~~~-~~~~~i~~~~~~~--~g~~~~~~~~~~~~~~~-----------~~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDR-SSANTVRRFKIDA--DGVLFDTGQEFISGGTR-----------PFNITFTPDGNFAFVANLI 196 (331)
T ss_dssp EEEEECTTSSCEEEEEE-TTTTEEEEEEECT--TCCEEEEEEEEECSSSS-----------EEEEEECTTSSEEEEEETT
T ss_pred cceEECCCCCEEEEEec-CCCceEEEEEECC--CCcEeecCCccccCCCC-----------ccceEECCCCCEEEEEeCC
Confidence 233332 554 666654 3344 78999875 2221111 111211110 122222 34568888877
Q ss_pred CccEEEEEccccCC
Q 046684 320 GLGMIIWREDEDKR 333 (373)
Q Consensus 320 ~~~~~~yd~~~~~~ 333 (373)
.+.+.+||++ ++
T Consensus 197 ~~~v~v~d~~--~~ 208 (331)
T 3u4y_A 197 GNSIGILETQ--NP 208 (331)
T ss_dssp TTEEEEEECS--ST
T ss_pred CCeEEEEECC--CC
Confidence 7789999999 77
No 61
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.10 E-value=0.099 Score=45.20 Aligned_cols=243 Identities=8% Similarity=-0.016 Sum_probs=114.8
Q ss_pred eeEEEEeCCCCCc-c-ccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKW-H-VLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w-~-~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..++.+|+.+.+. . .+.....+........-+..+++..+......+.+||+.+++....-+. ... +. .+...+
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~-~~-~~~~sp 137 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYD-AV-GIAISP 137 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTT-EE-EEEECT
T ss_pred CeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCC-cc-ceEECC
Confidence 4777889887764 2 2222222332233334455677433321222899999998876443111 111 11 222222
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc-eeee--cCCCccccccceeccCCceEE-ECCE-EEEEE
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-WQII--GSMPVEFAVRLTVWTPNESVC-TRGM-LYWIT 215 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-W~~~--~~~p~~~~~~~~~~~~~~~~~-~~g~-ly~~g 215 (373)
.+ ..+|+.+... ...+.+|+...+. -... ..++. .......++ -+|+ +|+.
T Consensus 138 dg-------~~l~~~~~~~---------~~~i~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~spdg~~l~v~- 193 (331)
T 3u4y_A 138 NG-------NGLILIDRSS---------ANTVRRFKIDADGVLFDTGQEFISG-------GTRPFNITFTPDGNFAFVA- 193 (331)
T ss_dssp TS-------SCEEEEEETT---------TTEEEEEEECTTCCEEEEEEEEECS-------SSSEEEEEECTTSSEEEEE-
T ss_pred CC-------CEEEEEecCC---------CceEEEEEECCCCcEeecCCccccC-------CCCccceEECCCCCEEEEE-
Confidence 11 3477765332 1226666654322 1111 00000 001111122 2465 6766
Q ss_pred cCCceEEEEEECCCCcE-EecccCCCCCCCceeEEE-ECCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhh-
Q 046684 216 SARAYSVIGFDIESNTW-RELSAPMADRLEFATLVS-RNQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMG- 291 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w-~~~~~~~p~~~~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~- 291 (373)
+.....+..||+++++. ..+ ...+.......++. -+|+ ||+... ....+.+|+++. .+.+.+..++....
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~i~~~d~~~----~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLL-NAVGTNNLPGTIVVSRDGSTVYVLTE-STVDVFNFNQLS----GTLSFVKSFGHGLLI 267 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEE-EEEECSSCCCCEEECTTSSEEEEECS-SEEEEEEEETTT----TEEEEEEEEECCCCC
T ss_pred eCCCCeEEEEECCCCccccee-eeccCCCCCceEEECCCCCEEEEEEc-CCCEEEEEECCC----Cceeeeccccccccc
Confidence 44567899999987764 111 11111121122333 3566 555432 223366777654 66655655443210
Q ss_pred -hhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEecccccC
Q 046684 292 -MRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCCLT 346 (373)
Q Consensus 292 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~~~ 346 (373)
...... .....+...+..||+.+...+.+.+||++ ++ .=..+...+..
T Consensus 268 ~~~~~~~---~~~~~~spdg~~l~v~~~~~~~v~v~d~~--~~--~~~~~~~~~~~ 316 (331)
T 3u4y_A 268 DPRPLFG---ANQMALNKTETKLFISANISRELKVFTIS--GK--VVGYVAGIEAN 316 (331)
T ss_dssp CCGGGTT---CCCEEECTTSSEEEEEETTTTEEEEEETT--SC--EEEECTTCCCB
T ss_pred CCCCccc---ccceEECCCCCEEEEecCCCCcEEEEEec--CC--cccceeccccc
Confidence 000000 00134444566788888777789999999 77 54445544433
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.089 Score=46.22 Aligned_cols=121 Identities=8% Similarity=0.077 Sum_probs=61.5
Q ss_pred CCEEEEEEcCCceEEEEEECCCCc--EEecccCCCCCCCcee-EEEE-C---CEEEEEEeecCCceEEEEeecCCCCCCe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNT--WRELSAPMADRLEFAT-LVSR-N---QKLTLIGGTCGGDACVWELSEGGDDDIW 280 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~--w~~~~~~~p~~~~~~~-~~~~-~---g~l~~~gg~~~~~~~i~~~~~~~~~~~W 280 (373)
++.+.+.+ .....|..||+.++. +..+ ..+..+..... +... + +.+++.++ .+..+.+|++.. ....+
T Consensus 171 ~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~--~~~~~ 245 (379)
T 3jrp_A 171 ESRKFVTG-GADNLVKIWKYNSDAQTYVLE-STLEGHSDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDN--EQGPW 245 (379)
T ss_dssp TTCEEEEE-ETTSCEEEEEEETTTTEEEEE-EEECCCSSCEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESS--TTSCC
T ss_pred CCCEEEEE-eCCCeEEEEEecCCCcceeeE-EEEecccCcEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCC--CCccc
Confidence 35655554 345678888886543 4443 22322222222 2222 3 56666655 444589999986 33333
Q ss_pred EEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEecccc
Q 046684 281 CLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 281 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
....... .... ..........++..++.++..+.+.+||.+. .+ +|..+....
T Consensus 246 ~~~~~~~-~~~~-------~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~--~~~~~~~~~ 298 (379)
T 3jrp_A 246 KKTLLKE-EKFP-------DVLWRASWSLSGNVLALSGGDNKVTLWKENL-EG--KWEPAGEVH 298 (379)
T ss_dssp EEEESSS-SCCS-------SCEEEEEECSSSCCEEEEESSSSEEEEEEEE-TT--EEEEEEEEC
T ss_pred eeeeecc-ccCC-------CcEEEEEEcCCCCEEEEecCCCcEEEEeCCC-CC--cccccccee
Confidence 3221111 0000 0001222333556666666677899999872 34 677665543
No 63
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.07 E-value=0.0044 Score=52.05 Aligned_cols=106 Identities=15% Similarity=0.026 Sum_probs=76.3
Q ss_pred eEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEE
Q 046684 204 SVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 204 ~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v 283 (373)
..+.++.||.-.|.... |.++|+++++-..- . ++....+.+++..+++||++.... . .+|.++. ++-+.+
T Consensus 60 L~~~~~~Ly~stG~~g~-v~~iD~~Tgkv~~~-~-l~~~~FgeGit~~g~~Ly~ltw~~-~--~v~V~D~----~Tl~~~ 129 (268)
T 3nok_A 60 LVFHQGHFFESTGHQGT-LRQLSLESAQPVWM-E-RLGNIFAEGLASDGERLYQLTWTE-G--LLFTWSG----MPPQRE 129 (268)
T ss_dssp EEEETTEEEEEETTTTE-EEECCSSCSSCSEE-E-ECTTCCEEEEEECSSCEEEEESSS-C--EEEEEET----TTTEEE
T ss_pred EEEECCEEEEEcCCCCE-EEEEECCCCcEEeE-E-CCCCcceeEEEEeCCEEEEEEccC-C--EEEEEEC----CcCcEE
Confidence 35567899998765434 99999999876554 3 444444566888899999986433 2 4566654 667888
Q ss_pred EeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 284 EKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 284 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+++.+.- +.+++..++.||+.++ ++.+..+|++ +.
T Consensus 130 ~ti~~~~e-----------GwGLt~Dg~~L~vSdG-s~~l~~iDp~--T~ 165 (268)
T 3nok_A 130 RTTRYSGE-----------GWGLCYWNGKLVRSDG-GTMLTFHEPD--GF 165 (268)
T ss_dssp EEEECSSC-----------CCCEEEETTEEEEECS-SSEEEEECTT--TC
T ss_pred EEEeCCCc-----------eeEEecCCCEEEEECC-CCEEEEEcCC--CC
Confidence 88776421 4677778899999875 7799999999 86
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.06 E-value=0.043 Score=48.27 Aligned_cols=231 Identities=8% Similarity=-0.012 Sum_probs=106.4
Q ss_pred eeEEEEeCCCCCccccCC-CCCCCCceeEE-eeCc-EEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEc
Q 046684 63 LCCYVHNPVSDKWHVLSL-DFLPYPVRPVS-SIGS-FLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVME 139 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~-~~~~~~~~~~~-~~~g-~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~ 139 (373)
..+..||..+..+..+.. ......-.+++ +.+| +++..+. ...+.+||..++++.....+...... ..++...
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~-v~~~~~~ 105 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRTWKPTLVILRINRA-ARCVRWA 105 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEEEETTEEEEEEECCCCSSC-EEEEEEC
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEEECCCCeeeeeEEeecCCCc-eeEEEEC
Confidence 466678877775433321 11122222232 2234 4444443 46789999988876543222211111 1122221
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc-eeeecCCCccccccceeccCCceEEE-CCEEEEEEcC
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-WQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSA 217 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~ 217 (373)
+ + ++.++.|+.+ ..+.+||..++. |......... + ...-...++. ++...+.+ .
T Consensus 106 ~---~-----~~~l~~~~~d----------~~v~i~d~~~~~~~~~~~~~~~~----~-~~~i~~~~~~~~~~~l~~~-~ 161 (372)
T 1k8k_C 106 P---N-----EKKFAVGSGS----------RVISICYFEQENDWWVCKHIKKP----I-RSTVLSLDWHPNSVLLAAG-S 161 (372)
T ss_dssp T---T-----SSEEEEEETT----------SSEEEEEEETTTTEEEEEEECTT----C-CSCEEEEEECTTSSEEEEE-E
T ss_pred C---C-----CCEEEEEeCC----------CEEEEEEecCCCcceeeeeeecc----c-CCCeeEEEEcCCCCEEEEE-c
Confidence 1 1 4455555443 346777766543 3322221100 0 0001111222 45555553 3
Q ss_pred CceEEEEEECCCCc----------------EEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCC
Q 046684 218 RAYSVIGFDIESNT----------------WRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDI 279 (373)
Q Consensus 218 ~~~~i~~yd~~~~~----------------w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~ 279 (373)
....+..||+.... -..+ ..+.........+.. ++.+++.++ .+..+.+|++.. .+
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~----~~ 235 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELM-FESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADK----KM 235 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEE-EECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGG----TT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhhe-EecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCC----Cc
Confidence 46678889964211 0111 111111111222222 555555554 445589999975 32
Q ss_pred eEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccC--CcccEEEeccc
Q 046684 280 WCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDK--RKWEWVWVGGC 343 (373)
Q Consensus 280 W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~--~~~~W~~~~~~ 343 (373)
.+..+...... ........++.+++.+ ..+.+.+||.. + + +|..+...
T Consensus 236 --~~~~~~~~~~~---------v~~~~~~~~~~~l~~~-~d~~i~i~~~~--~~~~--~~~~~~~~ 285 (372)
T 1k8k_C 236 --AVATLASETLP---------LLAVTFITESSLVAAG-HDCFPVLFTYD--SAAG--KLSFGGRL 285 (372)
T ss_dssp --EEEEEECSSCC---------EEEEEEEETTEEEEEE-TTSSCEEEEEE--TTTT--EEEECCCC
T ss_pred --eeEEEccCCCC---------eEEEEEecCCCEEEEE-eCCeEEEEEcc--CcCc--eEEEeecc
Confidence 33333211100 0122233466666655 66789999999 8 8 88776544
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.04 E-value=0.016 Score=52.59 Aligned_cols=191 Identities=12% Similarity=0.034 Sum_probs=95.2
Q ss_pred EEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEE
Q 046684 97 LLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYD 176 (373)
Q Consensus 97 l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd 176 (373)
+|+.+..+....++.+|+.++++..+..++.......+++ .+ + .++++.++.+ ..+.+||
T Consensus 91 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--s~---~-----~~~~~~~~~~----------~~i~~~d 150 (433)
T 3bws_A 91 YRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRF--ID---N-----TRLAIPLLED----------EGMDVLD 150 (433)
T ss_dssp EEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEE--SS---S-----SEEEEEBTTS----------SSEEEEE
T ss_pred eeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEE--eC---C-----CeEEEEeCCC----------CeEEEEE
Confidence 3444433333478889997765555443332222222222 11 1 7788876543 3589999
Q ss_pred CCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CC
Q 046684 177 SRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQ 253 (373)
Q Consensus 177 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g 253 (373)
..+++-......+.. .........+.+ +|.+++.+ .....+..||+++.+.... ..... .....++.. ++
T Consensus 151 ~~~g~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~s~-~~d~~v~~~d~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 223 (433)
T 3bws_A 151 INSGQTVRLSPPEKY----KKKLGFVETISIPEHNELWVSQ-MQANAVHVFDLKTLAYKAT-VDLTG-KWSKILLYDPIR 223 (433)
T ss_dssp TTTCCEEEECCCHHH----HTTCCEEEEEEEGGGTEEEEEE-GGGTEEEEEETTTCCEEEE-EECSS-SSEEEEEEETTT
T ss_pred CCCCeEeeecCcccc----cccCCceeEEEEcCCCEEEEEE-CCCCEEEEEECCCceEEEE-EcCCC-CCeeEEEEcCCC
Confidence 988876543332100 000001111223 57777775 4567899999988655433 12111 111222322 44
Q ss_pred EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEc-------CCccEE
Q 046684 254 KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYRE-------VGLGMI 324 (373)
Q Consensus 254 ~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~-------~~~~~~ 324 (373)
+..++.+..+..+.+|+++. .+ .+..++.... ...+.. .++.|++.+. ..+.+.
T Consensus 224 ~~l~~~~~~~~~i~~~d~~~----~~--~~~~~~~~~~-----------~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 224 DLVYCSNWISEDISVIDRKT----KL--EIRKTDKIGL-----------PRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp TEEEEEETTTTEEEEEETTT----TE--EEEECCCCSE-----------EEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred CEEEEEecCCCcEEEEECCC----Cc--EEEEecCCCC-----------ceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 44433333444578888754 32 3333332111 122222 3446666543 245788
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||++ ++
T Consensus 287 ~~d~~--~~ 293 (433)
T 3bws_A 287 IYSMD--KE 293 (433)
T ss_dssp EEETT--TT
T ss_pred EEECC--CC
Confidence 99998 77
No 66
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.99 E-value=0.058 Score=45.76 Aligned_cols=177 Identities=8% Similarity=0.073 Sum_probs=89.2
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPA 142 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~ 142 (373)
..+..||+.......+...............+|.+|+.... ...+.+||+..+....+.... ....+...... +
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~-~-- 173 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK--VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVN-D-- 173 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT--TTEEEEECTTSCEEEEEECTT-TCSSEEEEEEC-S--
T ss_pred CEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECC--CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEEC-C--
Confidence 45667875444333332221111122223346778887643 467999998765444432111 11112222222 1
Q ss_pred CCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCce
Q 046684 143 QHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAY 220 (373)
Q Consensus 143 ~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~ 220 (373)
++++|+..... ..+.+||...+.-..+.... . ......+.+ +|.+|+.. ...+
T Consensus 174 ------~g~l~v~~~~~----------~~i~~~~~~g~~~~~~~~~g-------~-~~~p~~i~~d~~G~l~v~~-~~~~ 228 (286)
T 1q7f_A 174 ------KQEIFISDNRA----------HCVKVFNYEGQYLRQIGGEG-------I-TNYPIGVGINSNGEILIAD-NHNN 228 (286)
T ss_dssp ------SSEEEEEEGGG----------TEEEEEETTCCEEEEESCTT-------T-SCSEEEEEECTTCCEEEEE-CSSS
T ss_pred ------CCCEEEEECCC----------CEEEEEcCCCCEEEEEccCC-------c-cCCCcEEEECCCCCEEEEe-CCCC
Confidence 16788865332 46899998655433332210 0 011122333 57888885 3343
Q ss_pred -EEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeec
Q 046684 221 -SVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 221 -~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
.|..||+..+.-..+....+.. .-..++. -+|+||+.. .+..+.+|++..
T Consensus 229 ~~i~~~~~~g~~~~~~~~~~~~~-~~~~i~~~~~g~l~vs~--~~~~v~v~~~~~ 280 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALESKVKHA-QCFDVALMDDGSVVLAS--KDYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEECTTSCEEEEEEESSCCS-CEEEEEEETTTEEEEEE--TTTEEEEEECSC
T ss_pred EEEEEECCCCCEEEEEcccCCCC-cceeEEECCCCcEEEEC--CCCeEEEEEccc
Confidence 8999998766555442221111 1123333 378888874 344588998754
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.97 E-value=0.081 Score=45.44 Aligned_cols=190 Identities=13% Similarity=0.062 Sum_probs=93.0
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.++. ...+.+||..+++-... +..... ...++...+ +++.++.|+.+ ..+.
T Consensus 76 ~~~~l~s~~~--d~~i~vwd~~~~~~~~~--~~~~~~-~v~~~~~~~--------~~~~l~s~~~d----------~~i~ 132 (312)
T 4ery_A 76 DSNLLVSASD--DKTLKIWDVSSGKCLKT--LKGHSN-YVFCCNFNP--------QSNLIVSGSFD----------ESVR 132 (312)
T ss_dssp TSSEEEEEET--TSEEEEEETTTCCEEEE--EECCSS-CEEEEEECS--------SSSEEEEEETT----------SCEE
T ss_pred CCCEEEEECC--CCEEEEEECCCCcEEEE--EcCCCC-CEEEEEEcC--------CCCEEEEEeCC----------CcEE
Confidence 4444444432 46789999988764321 111111 111122211 14456666554 3588
Q ss_pred EEECCCCceee-ecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE
Q 046684 174 MYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS 250 (373)
Q Consensus 174 ~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~ 250 (373)
+||.++++-.. +.... .....+.+ +|.+.+.+ .....+..||+.+++-... ...........+..
T Consensus 133 iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~ 200 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHS----------DPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKF 200 (312)
T ss_dssp EEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEE-ECCSSCCCEEEEEE
T ss_pred EEECCCCEEEEEecCCC----------CcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCceeeE-EeccCCCceEEEEE
Confidence 99988765221 11110 01111222 45555554 4466789999987764332 11111111111222
Q ss_pred -ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 251 -RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 251 -~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
-+++.++.++ .+..+.+|++.. . +.+..+...... ...........++.+++.++..+.+.+||.+
T Consensus 201 ~~~~~~l~~~~-~d~~i~iwd~~~----~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 201 SPNGKYILAAT-LDNTLKLWDYSK----G--KCLKTYTGHKNE------KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp CTTSSEEEEEE-TTTEEEEEETTT----T--EEEEEECSSCCS------SSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred CCCCCEEEEEc-CCCeEEEEECCC----C--cEEEEEEecCCc------eEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 2555555544 445589999864 3 233332211100 0000123333567777788888889999999
Q ss_pred ccCC
Q 046684 330 EDKR 333 (373)
Q Consensus 330 ~~~~ 333 (373)
++
T Consensus 268 --~~ 269 (312)
T 4ery_A 268 --TK 269 (312)
T ss_dssp --TC
T ss_pred --Cc
Confidence 77
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.92 E-value=0.094 Score=45.20 Aligned_cols=177 Identities=9% Similarity=0.003 Sum_probs=88.0
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...+.+||..+++......+........ .+...+ + ++.++.++.+ ..+.+||..+++-...
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~---~-----~~~l~~~~~d----------g~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISP---D-----SKVCFSCCSD----------GNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSSCEE-EEEECT---T-----SSEEEEEETT----------SCEEEEETTTTEEEEE
T ss_pred CCcEEEEECCCCCcceeeecccCCCceE-EEEECC---C-----CCEEEEEeCC----------CcEEEEeCCCCceeee
Confidence 4679999998877443322222211111 122211 1 4455556543 3588999887653322
Q ss_pred cCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeec
Q 046684 186 GSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTC 262 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~ 262 (373)
-... ......+.+ ++...+.+ .....+..||+.+.+-... ...+. ....+.. -+++++++++ .
T Consensus 179 ~~~~---------~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~-~~~~~--~v~~~~~s~~~~~l~~~~-~ 244 (337)
T 1gxr_A 179 FQGH---------TDGASCIDISNDGTKLWTG-GLDNTVRSWDLREGRQLQQ-HDFTS--QIFSLGYCPTGEWLAVGM-E 244 (337)
T ss_dssp ECCC---------SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEE-EECSS--CEEEEEECTTSSEEEEEE-T
T ss_pred eecc---------cCceEEEEECCCCCEEEEE-ecCCcEEEEECCCCceEee-ecCCC--ceEEEEECCCCCEEEEEc-C
Confidence 1110 001111222 45555553 3567899999987764433 22211 1122222 2566666654 3
Q ss_pred CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 263 GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 263 ~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+..+.+|++.. ..=..+....... .......++..++.++..+.+.+||.+ ++
T Consensus 245 ~~~i~~~~~~~----~~~~~~~~~~~~v------------~~~~~~~~~~~l~~~~~dg~i~~~~~~--~~ 297 (337)
T 1gxr_A 245 SSNVEVLHVNK----PDKYQLHLHESCV------------LSLKFAYCGKWFVSTGKDNLLNAWRTP--YG 297 (337)
T ss_dssp TSCEEEEETTS----SCEEEECCCSSCE------------EEEEECTTSSEEEEEETTSEEEEEETT--TC
T ss_pred CCcEEEEECCC----CCeEEEcCCccce------------eEEEECCCCCEEEEecCCCcEEEEECC--CC
Confidence 44578999865 2211111100000 122233356667777777889999999 77
No 69
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.91 E-value=0.15 Score=43.64 Aligned_cols=189 Identities=8% Similarity=0.005 Sum_probs=97.5
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
++.+|+.+.. ...+++||+.+++...+.. +. ... ++..++ + +++++.. . ..+.
T Consensus 24 ~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~-~~---~~~-~i~~~~---d-----G~l~v~~--~----------~~l~ 76 (297)
T 3g4e_A 24 SNSLLFVDIP--AKKVCRWDSFTKQVQRVTM-DA---PVS-SVALRQ---S-----GGYVATI--G----------TKFC 76 (297)
T ss_dssp TTEEEEEETT--TTEEEEEETTTCCEEEEEC-SS---CEE-EEEEBT---T-----SSEEEEE--T----------TEEE
T ss_pred CCEEEEEECC--CCEEEEEECCCCcEEEEeC-CC---ceE-EEEECC---C-----CCEEEEE--C----------CeEE
Confidence 5667776643 4679999999887544321 11 111 222221 1 5566543 1 3689
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEc----------CCceEEEEEECCCCcEEecccCCCC
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITS----------ARAYSVIGFDIESNTWRELSAPMAD 241 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg----------~~~~~i~~yd~~~~~w~~~~~~~p~ 241 (373)
+||..+++.+.+...+.. ........+.+ +|.+|+... .....++.+|+.. +...+.....
T Consensus 77 ~~d~~~g~~~~~~~~~~~-----~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~- 149 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDND-----KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD- 149 (297)
T ss_dssp EEETTTTEEEEEEECCTT-----CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES-
T ss_pred EEECCCCcEEEEEecCCC-----CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc-
Confidence 999999988776543211 00011111222 588777531 1235788888763 3333311111
Q ss_pred CCCceeEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEE---EEeechhhhhhhcCCCCCCCceEE-EecCCEEEE
Q 046684 242 RLEFATLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCL---IEKVPIEMGMRLSGGKASWGGTRC-AAGNGAICL 315 (373)
Q Consensus 242 ~~~~~~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~---v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 315 (373)
...+++.. +| .||+.... ...+.+|+++. .+..... +..++..... +-.+ +..++.||+
T Consensus 150 --~pngi~~spdg~~lyv~~~~-~~~i~~~~~d~--~~G~~~~~~~~~~~~~~~~~----------p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSL-SYSVDAFDYDL--QTGQISNRRSVYKLEKEEQI----------PDGMCIDAEGKLWV 214 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGG-GTEEEEEEECT--TTCCEEEEEEEEECCGGGCE----------EEEEEEBTTSCEEE
T ss_pred --cccceEEcCCCCEEEEecCC-CCcEEEEeccC--CCCcccCcEEEEECCCCCCC----------CCeeEECCCCCEEE
Confidence 11233333 45 47776543 23356666643 2344332 2222221100 2333 334678999
Q ss_pred EEcCCccEEEEEccccCC
Q 046684 316 YREVGLGMIIWREDEDKR 333 (373)
Q Consensus 316 ~~~~~~~~~~yd~~~~~~ 333 (373)
.....+.|.+||++ ++
T Consensus 215 a~~~~~~v~~~d~~--tG 230 (297)
T 3g4e_A 215 ACYNGGRVIRLDPV--TG 230 (297)
T ss_dssp EEETTTEEEEECTT--TC
T ss_pred EEcCCCEEEEEcCC--Cc
Confidence 87666679999998 87
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.89 E-value=0.39 Score=47.33 Aligned_cols=189 Identities=7% Similarity=0.008 Sum_probs=101.2
Q ss_pred eCcEEEEeeCCCCceEEEEEcCccc----ceeccCCCCCCCCCC-eEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTR----QFRYLPLLNVSRTNP-AVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT 167 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~----~w~~lp~~~~~~~~~-~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~ 167 (373)
.++.||+.... ...|+.+++... ....+-. .....+ ++++-... ++||+.-..
T Consensus 434 ~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~--~~l~~P~GLAvD~~~---------~~LY~tD~~--------- 491 (791)
T 3m0c_C 434 ASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLAVDWIH---------SNIYWTDSV--------- 491 (791)
T ss_dssp TTTEEEEEETT--TTEEEEEEC--------CEEEEC--SSCSCCCEEEEETTT---------TEEEEEETT---------
T ss_pred cCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEe--cCCCCcceeeeeecC---------CcEEEEecC---------
Confidence 47889988764 456777777642 2222111 111112 33332111 689987532
Q ss_pred ccceEEEEECCCCceeeecCCCccccccceeccCCceEE--ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCc
Q 046684 168 YESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC--TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 168 ~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
...|++++.....-+.+..... . ....+++ .+|.|||.-......|.++++....-..+ ..-... .-
T Consensus 492 -~~~I~v~~ldG~~~~~l~~~~l-----~---~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l-v~~~l~-~P 560 (791)
T 3m0c_C 492 -LGTVSVADTKGVKRKTLFRENG-----S---KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL-VTENIQ-WP 560 (791)
T ss_dssp -TTEEEEEETTSSSEEEEEECTT-----C---CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE-ECSSCS-CE
T ss_pred -CCeEEEEeCCCCeEEEEEeCCC-----C---CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE-EeCCCC-Cc
Confidence 2478899987665444432100 0 1112233 25899999533347899999987655544 221111 11
Q ss_pred eeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccE
Q 046684 246 ATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGM 323 (373)
Q Consensus 246 ~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
.++++- +++||++.... ..|.+.+++ .......+.. . ..+ ..++++...++.||+.+.....|
T Consensus 561 ~GLavD~~~~~LYwaD~~~-~~I~~~d~d---G~~~~~v~~~-~-~~l---------~~P~glav~~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKL-HSISSIDVN---GGNRKTILED-E-KRL---------AHPFSLAVFEDKVFWTDIINEAI 625 (791)
T ss_dssp EEEEEETTTTEEEEEETTT-TEEEEEETT---SCSCEEEEEC-T-TTT---------SSEEEEEEETTEEEEEETTTTEE
T ss_pred eEEEEecCCCeEEEEeCCC-CcEEEEecC---CCceEEEecC-C-Ccc---------CCCCEEEEeCCEEEEEECCCCEE
Confidence 234443 78999986422 234444443 2233333321 1 111 12567777899999999888889
Q ss_pred EEEEcc
Q 046684 324 IIWRED 329 (373)
Q Consensus 324 ~~yd~~ 329 (373)
+..|..
T Consensus 626 ~~~dk~ 631 (791)
T 3m0c_C 626 FSANRL 631 (791)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 999976
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.88 E-value=0.066 Score=45.54 Aligned_cols=190 Identities=7% Similarity=-0.045 Sum_probs=96.2
Q ss_pred cEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 95 SFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 95 g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
|.+++.+.. ...+.++|+.|++ |+.-.. .....+.+.+.. ++++++.+ . ..+
T Consensus 5 ~~~lv~~~~--~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~p----------dG~ilvs~-~-----------~~V 58 (276)
T 3no2_A 5 QHLLVGGSG--WNKIAIINKDTKEIVWEYPLE--KGWECNSVAATK----------AGEILFSY-S-----------KGA 58 (276)
T ss_dssp CEEEEECTT--CSEEEEEETTTTEEEEEEECC--TTCCCCEEEECT----------TSCEEEEC-B-----------SEE
T ss_pred CcEEEeeCC--CCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECC----------CCCEEEeC-C-----------CCE
Confidence 334444432 5788999998887 443211 111122333221 16677732 1 358
Q ss_pred EEEECCCCc--eeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCc-EEecccCCC--C--CCCc
Q 046684 173 EMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNT-WRELSAPMA--D--RLEF 245 (373)
Q Consensus 173 ~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~-w~~~~~~~p--~--~~~~ 245 (373)
..||+ +++ |+.-..... . ........+|.+++........++++|++.+. |+.- .... . ....
T Consensus 59 ~~~d~-~G~~~W~~~~~~~~-------~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~-~~~~~~~~~~~~~ 128 (276)
T 3no2_A 59 KMITR-DGRELWNIAAPAGC-------E-MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE-FETGIERPHAQFR 128 (276)
T ss_dssp EEECT-TSCEEEEEECCTTC-------E-EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEE-ECCSCSSGGGSCS
T ss_pred EEECC-CCCEEEEEcCCCCc-------c-ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEe-ccCCCCccccccc
Confidence 89998 554 765542110 0 01112334677777643336788999986553 3321 1111 1 1111
Q ss_pred eeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEE
Q 046684 246 ATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMII 325 (373)
Q Consensus 246 ~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 325 (373)
......+|.+++... ....+.+|+.+ .+..|+.-. +... .......++.+++.+.....+..
T Consensus 129 ~v~~~~~G~~lv~~~-~~~~v~~~d~~---G~~~w~~~~--~~~~------------~~~~~~~~g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 129 QINKNKKGNYLVPLF-ATSEVREIAPN---GQLLNSVKL--SGTP------------FSSAFLDNGDCLVACGDAHCFVQ 190 (276)
T ss_dssp CCEECTTSCEEEEET-TTTEEEEECTT---SCEEEEEEC--SSCC------------CEEEECTTSCEEEECBTTSEEEE
T ss_pred CceECCCCCEEEEec-CCCEEEEECCC---CCEEEEEEC--CCCc------------cceeEcCCCCEEEEeCCCCeEEE
Confidence 112334666665543 22334444442 233455432 1100 12333446777787766667999
Q ss_pred EEccccCCcccEEEe
Q 046684 326 WREDEDKRKWEWVWV 340 (373)
Q Consensus 326 yd~~~~~~~~~W~~~ 340 (373)
+|++ +++..|+.-
T Consensus 191 ~d~~--tG~~~w~~~ 203 (276)
T 3no2_A 191 LNLE--SNRIVRRVN 203 (276)
T ss_dssp ECTT--TCCEEEEEE
T ss_pred EeCc--CCcEEEEec
Confidence 9999 897788854
No 72
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.86 E-value=0.055 Score=47.67 Aligned_cols=191 Identities=6% Similarity=-0.020 Sum_probs=90.6
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCC-CCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNV-SRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
.++.+...+. ...+.+||..+++-........ .....-.++...+ +++.++.|+.+ ..
T Consensus 92 ~d~~l~~~s~---dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp--------dg~~l~sgs~d----------~~ 150 (344)
T 4gqb_B 92 GERGILVASD---SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS--------SGTQAVSGSKD----------IC 150 (344)
T ss_dssp TTTEEEEEET---TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT--------TSSEEEEEETT----------SC
T ss_pred CCCeEEEEEC---CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC--------CCCEEEEEeCC----------Ce
Confidence 3565554443 5679999998876433221111 1111111222211 15566666554 35
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEE-ECC-EEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRG-MLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TL 248 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g-~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~ 248 (373)
+.++|..+++=. ..+.. +.. .-..+++ .++ .+++.+ ...+.|..+|+.+.+-... .......... .+
T Consensus 151 i~iwd~~~~~~~--~~~~~-----h~~-~V~~~~~~~~~~~~l~s~-s~D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 151 IKVWDLAQQVVL--SSYRA-----HAA-QVTCVAASPHKDSVFLSC-SEDNRILLWDTRCPKPASQ-IGCSAPGYLPTSL 220 (344)
T ss_dssp EEEEETTTTEEE--EEECC-----CSS-CEEEEEECSSCTTEEEEE-ETTSCEEEEETTSSSCEEE-CC----CCCEEEE
T ss_pred EEEEECCCCcEE--EEEcC-----cCC-ceEEEEecCCCCCceeee-ccccccccccccccceeee-eecceeeccceee
Confidence 889998876522 11100 000 0011122 133 344443 3456788999987654332 1211111111 22
Q ss_pred EEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEE-e-cCCEEEEEEcCCccEE
Q 046684 249 VSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCA-A-GNGAICLYREVGLGMI 324 (373)
Q Consensus 249 ~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~ 324 (373)
... ++.+++.++ .+..+.+|++.. . +.+..+..-. .. ...+. . .+..+++.++.++.+.
T Consensus 221 ~~~p~~~~~l~sg~-~dg~v~~wd~~~----~--~~~~~~~~h~---------~~-v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 221 AWHPQQSEVFVFGD-ENGTVSLVDTKS----T--SCVLSSAVHS---------QC-VTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp EECSSCTTEEEEEE-TTSEEEEEESCC--------CCEEEECCS---------SC-EEEEEECSSSSCCEEEEETTSCEE
T ss_pred eecCCCCcceEEec-cCCcEEEEECCC----C--cEEEEEcCCC---------CC-EEEEEEccCCCeEEEEEeCCCeEE
Confidence 222 455666554 444589999865 2 2222221100 00 12222 2 3446777777777899
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||.+ ++
T Consensus 284 vwd~~--~~ 290 (344)
T 4gqb_B 284 VLDSS--LS 290 (344)
T ss_dssp EECTT--CC
T ss_pred EEECC--CC
Confidence 99999 87
No 73
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.85 E-value=0.24 Score=44.34 Aligned_cols=216 Identities=7% Similarity=-0.005 Sum_probs=114.5
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE--eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS--SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~--~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..+..+++.......+.. ... ....++ ..++.||+.... ...++.+++..+..+.+...... ....+++-...
T Consensus 96 ~~I~~i~~~~~~~~~~~~-~~~-~~~gl~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~ 170 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN-NLE-NAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVH 170 (386)
T ss_dssp SCEEEECTTSCCCEEEEC-SCS-CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTT
T ss_pred ccceeeccCCCcEEEEec-CCC-ccEEEEEecCCCeEEEEeCC--CCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCC
Confidence 356667776655443311 111 122333 347889987753 46799999987765443221111 11223332111
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~ 218 (373)
++||+.-... ..+++++.....-+.+.... ......+++- +|.|||.....
T Consensus 171 ---------g~lY~~d~~~----------~~I~~~~~dg~~~~~l~~~~--------l~~P~giavdp~~g~ly~td~~~ 223 (386)
T 3v65_B 171 ---------DKLYWTDSGT----------SRIEVANLDGAHRKVLLWQS--------LEKPRAIALHPMEGTIYWTDWGN 223 (386)
T ss_dssp ---------TEEEEEETTT----------TEEEECBTTSCSCEEEECSS--------CSCEEEEEEETTTTEEEEEECSS
T ss_pred ---------CeEEEEcCCC----------CeEEEEeCCCCceEEeecCC--------CCCCcEEEEEcCCCeEEEeccCC
Confidence 7788875322 36788877654433322110 0011222333 58999985333
Q ss_pred ceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcC
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSG 296 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~ 296 (373)
...|.++|+....-..+ ...... .-.+++. .+++||++.... . .|+..+. +...=..+.... .
T Consensus 224 ~~~I~r~~~dG~~~~~~-~~~~~~-~PnGlavd~~~~~lY~aD~~~-~--~I~~~d~--dG~~~~~~~~~~--~------ 288 (386)
T 3v65_B 224 TPRIEASSMDGSGRRII-ADTHLF-WPNGLTIDYAGRRMYWVDAKH-H--VIERANL--DGSHRKAVISQG--L------ 288 (386)
T ss_dssp SCEEEEEETTSCSCEEE-ECSSCS-CEEEEEEEGGGTEEEEEETTT-T--EEEEECT--TSCSCEEEECSS--C------
T ss_pred CCEEEEEeCCCCCcEEE-EECCCC-CeeeEEEeCCCCEEEEEECCC-C--EEEEEeC--CCCeeEEEEECC--C------
Confidence 47899999986544443 221111 1224444 378999986432 2 4554443 212112221111 1
Q ss_pred CCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 297 GKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++..++.||+.+.....|..+|..
T Consensus 289 ----~~P~giav~~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 289 ----PHPFAITVFEDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp ----SSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ----CCceEEEEECCEEEEeeCCCCeEEEEECC
Confidence 11566666889999999888889999965
No 74
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.84 E-value=0.14 Score=44.50 Aligned_cols=56 Identities=9% Similarity=-0.218 Sum_probs=32.1
Q ss_pred eeEEEEeCCCCCccc-cCCCCCCCCceeEEeeCc-EEEEeeCCCCceEEEEEcCccccee
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLPYPVRPVSSIGS-FLLLRPINSTILQLVLCNPFTRQFR 120 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~g-~l~~~gg~~~~~~~~v~np~t~~w~ 120 (373)
..+..+|..+.+... ++............+.+| .+|+.+.. ...+.++|+.+++..
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNT 78 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC--CCcEEEEeCCCCcEE
Confidence 577789988775433 222221012222233344 67776642 467999999988754
No 75
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.079 Score=52.15 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=96.9
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...+.+||..++++..+..+....... .++....... ++.++.|+.+ ..+.+||..++.|..+
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~V-~~l~~s~~~~------~~~l~s~s~D----------g~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKF------GTILASCSYD----------GKVLIWKEENGRWSQI 92 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSCE-EEEEECCTTS------CSEEEEEETT----------SCEEEEEEETTEEEEE
T ss_pred CCcEEEEecCCCCCccceeccCCcCce-EEEEecCCCC------CCEEEEEeCC----------CeEEEEECCCCccccc
Confidence 456788887755555443333222211 1222212111 3355555544 3588999988887665
Q ss_pred cCCCccccccceeccCCceEEE--C--CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eEEEE---------
Q 046684 186 GSMPVEFAVRLTVWTPNESVCT--R--GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVSR--------- 251 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~--~--g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~~--------- 251 (373)
..... .......+.+ + |.+.+.| ...+.|..||+.++.-... .......... .+...
T Consensus 93 ~~~~~-------h~~~V~~v~~sp~~~~~~l~sg-s~dg~I~vwdl~~~~~~~~-~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 93 AVHAV-------HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EEECC-------CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCSSSCCCC-EEEECCSSCEEEEEECCCC------
T ss_pred ccccC-------CCCCeEEEEECCCCCCCEEEEE-eCCCcEEEEEeecCCCcce-eEeecCCCceEEEEecCcccccccc
Confidence 54321 0111111222 2 5555554 4567899999887632211 1111111111 12211
Q ss_pred -----CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecC---CEEEEEEcCCccE
Q 046684 252 -----NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGN---GAICLYREVGLGM 323 (373)
Q Consensus 252 -----~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~ 323 (373)
++.+++.++. +..+.+|++.. ....+..+..+...... ........+ +.+++.++..+.+
T Consensus 164 ~~~~~d~~~l~sgs~-dg~I~iwd~~~--~~~~~~~~~~~~~h~~~---------V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 164 HNGTKESRKFVTGGA-DNLVKIWKYNS--DAQTYVLESTLEGHSDW---------VRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp ---CGGGCCEEEEET-TSCEEEEEEET--TTTEEEEEEEECCCSSC---------EEEEEECCCCSSSEEEEEEESSSCE
T ss_pred cccCCCCCEEEEEEC-CCeEEEEeccC--CcccceeeeeecCCCCc---------EEEEEeccCCCCCCEEEEEecCCEE
Confidence 3555665554 44589999987 55566666555421110 012222234 6888888888889
Q ss_pred EEEEccccCC
Q 046684 324 IIWREDEDKR 333 (373)
Q Consensus 324 ~~yd~~~~~~ 333 (373)
.+||+. ++
T Consensus 232 ~iwd~~--~~ 239 (753)
T 3jro_A 232 IIWTQD--NE 239 (753)
T ss_dssp EEEEES--SS
T ss_pred EEecCC--CC
Confidence 999999 65
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.083 Score=47.25 Aligned_cols=104 Identities=8% Similarity=-0.003 Sum_probs=54.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
++.+.+.+ .....+..||..+.+.... ... ....-..+... ++ +++.+..+..+.+|++.. . +.+..+
T Consensus 258 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~-~~~-~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~----~--~~~~~~ 326 (425)
T 1r5m_A 258 TNKLLLSA-SDDGTLRIWHGGNGNSQNC-FYG-HSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ----N--TLLALS 326 (425)
T ss_dssp TTTEEEEE-ETTSCEEEECSSSBSCSEE-ECC-CSSCEEEEEEETTT--EEEEEETTSEEEEEETTT----T--EEEEEE
T ss_pred CCCEEEEE-cCCCEEEEEECCCCccceE-ecC-CCccEEEEEECCCC--EEEEEeCCCcEEEEECCC----C--cEeEec
Confidence 45544443 3466788999887643322 111 11112233333 45 344444455688998854 2 333333
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...... ........++.+++.++..+.+.+||.+ +.
T Consensus 327 ~~~~~~---------i~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~ 362 (425)
T 1r5m_A 327 IVDGVP---------IFAGRISQDGQKYAVAFMDGQVNVYDLK--KL 362 (425)
T ss_dssp ECTTCC---------EEEEEECTTSSEEEEEETTSCEEEEECH--HH
T ss_pred ccCCcc---------EEEEEEcCCCCEEEEEECCCeEEEEECC--CC
Confidence 221100 0122233356677777777789999999 66
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.055 Score=48.58 Aligned_cols=192 Identities=9% Similarity=0.008 Sum_probs=96.7
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCccc
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYE 169 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~ 169 (373)
+...++.++..+. ...+.+||..+++...+-...... ...++...+ + ++.++.|+.+
T Consensus 99 ~~~s~~~l~~~~~---d~~v~lw~~~~~~~~~~~~~~~~~--~v~~v~~s~---~-----~~~l~~~~~d---------- 155 (401)
T 4aez_A 99 LDWSNLNVVAVAL---ERNVYVWNADSGSVSALAETDEST--YVASVKWSH---D-----GSFLSVGLGN---------- 155 (401)
T ss_dssp EEECTTSEEEEEE---TTEEEEEETTTCCEEEEEECCTTC--CEEEEEECT---T-----SSEEEEEETT----------
T ss_pred EeecCCCEEEEEC---CCeEEEeeCCCCcEeEeeecCCCC--CEEEEEECC---C-----CCEEEEECCC----------
Confidence 4444455555554 578999999998866543332111 112222222 1 5566666543
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eE
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TL 248 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~ 248 (373)
..+.+||..+++-...-.. + ......+..++.+.+.+ .....+..+|+....-... ......... .+
T Consensus 156 g~i~iwd~~~~~~~~~~~~-------~--~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~--~~~~~~~~v~~~ 223 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG-------H--QARVGCLSWNRHVLSSG-SRSGAIHHHDVRIANHQIG--TLQGHSSEVCGL 223 (401)
T ss_dssp SCEEEEETTTCCEEEEECC-------C--SSCEEEEEEETTEEEEE-ETTSEEEEEETTSSSCEEE--EEECCSSCEEEE
T ss_pred CeEEEEECcCCeEEEEecC-------C--CCceEEEEECCCEEEEE-cCCCCEEEEecccCcceee--EEcCCCCCeeEE
Confidence 3688999887653222111 0 01112233466655554 4567899999984332111 111111222 22
Q ss_pred EEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEc--CCccEEE
Q 046684 249 VSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYRE--VGLGMII 325 (373)
Q Consensus 249 ~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~ 325 (373)
... ++.+++.++. +..+.+|++.. .. .+..+.... ...........++.+++.++ ..+.+.+
T Consensus 224 ~~~~~~~~l~s~~~-d~~v~iwd~~~----~~--~~~~~~~~~--------~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 224 AWRSDGLQLASGGN-DNVVQIWDARS----SI--PKFTKTNHN--------AAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EECTTSSEEEEEET-TSCEEEEETTC----SS--EEEEECCCS--------SCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred EEcCCCCEEEEEeC-CCeEEEccCCC----CC--ccEEecCCc--------ceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 222 5666666554 34579999864 22 222221110 00112233333567777765 5678999
Q ss_pred EEccccCC
Q 046684 326 WREDEDKR 333 (373)
Q Consensus 326 yd~~~~~~ 333 (373)
||.. ++
T Consensus 289 ~d~~--~~ 294 (401)
T 4aez_A 289 WNAA--TG 294 (401)
T ss_dssp EETT--TC
T ss_pred EECC--CC
Confidence 9998 76
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.74 E-value=0.035 Score=48.84 Aligned_cols=200 Identities=11% Similarity=0.025 Sum_probs=94.8
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|.+++.++. ...+.+||..++++..+..+............. +. ++.++.|+.+ ..+.
T Consensus 19 ~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~--------~~~l~~~~~d----------g~i~ 77 (372)
T 1k8k_C 19 DRTQIAICPN--NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA-PD--------SNRIVTCGTD----------RNAY 77 (372)
T ss_dssp TSSEEEEECS--SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE-TT--------TTEEEEEETT----------SCEE
T ss_pred CCCEEEEEeC--CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEe-CC--------CCEEEEEcCC----------CeEE
Confidence 4444444432 567899999888765544443222222222222 11 4455555543 3588
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCc-EEecccC-CCCCCCceeEEE
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNT-WRELSAP-MADRLEFATLVS 250 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~-w~~~~~~-~p~~~~~~~~~~ 250 (373)
+||..++++........ .......+.+. ++...+.++ ....+..||+.+++ |...... .+....-..+..
T Consensus 78 vwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILR------INRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp EEEEETTEEEEEEECCC------CSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred EEECCCCeeeeeEEeec------CCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 89988887655433210 00001111221 455555543 34567777776654 3222111 111111122222
Q ss_pred E-CCEEEEEEeecCCceEEEEeecCC-----CC-------CCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEE
Q 046684 251 R-NQKLTLIGGTCGGDACVWELSEGG-----DD-------DIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYR 317 (373)
Q Consensus 251 ~-~g~l~~~gg~~~~~~~i~~~~~~~-----~~-------~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
. ++.+++.++ .+..+.+|++.... .. ..-..+..+.... ......+...++..++.+
T Consensus 151 ~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 151 HPNSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC---------GWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp CTTSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS---------SCEEEEEECSSSSEEEEE
T ss_pred cCCCCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCCC---------CeEEEEEECCCCCEEEEE
Confidence 2 566666554 34457999964200 00 1122333332110 000122222355566667
Q ss_pred cCCccEEEEEccccCC
Q 046684 318 EVGLGMIIWREDEDKR 333 (373)
Q Consensus 318 ~~~~~~~~yd~~~~~~ 333 (373)
+..+.+.+||.+ +.
T Consensus 221 ~~d~~i~i~d~~--~~ 234 (372)
T 1k8k_C 221 SHDSTVCLADAD--KK 234 (372)
T ss_dssp ETTTEEEEEEGG--GT
T ss_pred eCCCEEEEEECC--CC
Confidence 777789999998 76
No 79
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.70 E-value=0.23 Score=41.94 Aligned_cols=219 Identities=11% Similarity=0.072 Sum_probs=107.3
Q ss_pred eeEEEEeCCCCCccccCCCC----CCCCceeEEe--eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEE
Q 046684 63 LCCYVHNPVSDKWHVLSLDF----LPYPVRPVSS--IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGI 136 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~----~~~~~~~~~~--~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~ 136 (373)
..+..||+.......+.... .......++. .+|.+|+.+.. ....+.+||+..+....+.... ...+. .+
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-~~~~i~~~d~~g~~~~~~~~~~--~~~~~-~i 126 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-PTHQIQIYNQYGQFVRKFGATI--LQHPR-GV 126 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-GGCEEEEECTTSCEEEEECTTT--CSCEE-EE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-CCCEEEEECCCCcEEEEecCcc--CCCce-EE
Confidence 45677887754333332111 0011223443 57888887631 1367899996544433332211 11111 22
Q ss_pred EEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEE
Q 046684 137 VMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWI 214 (373)
Q Consensus 137 ~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~ 214 (373)
..++ + +++|+..... ..+.+||...+.-+.+.... .......+.+ +|.+|+.
T Consensus 127 ~~~~---~-----g~l~v~~~~~----------~~i~~~~~~g~~~~~~~~~~--------~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 127 TVDN---K-----GRIIVVECKV----------MRVIIFDQNGNVLHKFGCSK--------HLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EECT---T-----SCEEEEETTT----------TEEEEECTTSCEEEEEECTT--------TCSSEEEEEECSSSEEEEE
T ss_pred EEeC---C-----CCEEEEECCC----------CEEEEEcCCCCEEEEeCCCC--------ccCCcEEEEECCCCCEEEE
Confidence 2221 1 6688865322 46888987654433332110 0011112333 4888887
Q ss_pred EcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhh
Q 046684 215 TSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMR 293 (373)
Q Consensus 215 gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~ 293 (373)
. .....|..||+..+....+. .......-.+++. -+|.||+.....+..+.+|+.+. ..-..+.. ....
T Consensus 181 ~-~~~~~i~~~~~~g~~~~~~~-~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g----~~~~~~~~-~~~~--- 250 (286)
T 1q7f_A 181 D-NRAHCVKVFNYEGQYLRQIG-GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG----QLISALES-KVKH--- 250 (286)
T ss_dssp E-GGGTEEEEEETTCCEEEEES-CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS----CEEEEEEE-SSCC---
T ss_pred E-CCCCEEEEEcCCCCEEEEEc-cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC----CEEEEEcc-cCCC---
Confidence 4 34678999998766555551 1111111123333 36788888754332567776432 22122211 1100
Q ss_pred hcCCCCCCCceEE-EecCCEEEEEEcCCccEEEEEcc
Q 046684 294 LSGGKASWGGTRC-AAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..+ +..++.+|+.+ ..+.+.+|+..
T Consensus 251 -------~~~~~i~~~~~g~l~vs~-~~~~v~v~~~~ 279 (286)
T 1q7f_A 251 -------AQCFDVALMDDGSVVLAS-KDYRLYIYRYV 279 (286)
T ss_dssp -------SCEEEEEEETTTEEEEEE-TTTEEEEEECS
T ss_pred -------CcceeEEECCCCcEEEEC-CCCeEEEEEcc
Confidence 002233 33477899885 45678889886
No 80
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.68 E-value=0.16 Score=44.98 Aligned_cols=184 Identities=7% Similarity=-0.068 Sum_probs=92.5
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...+.+||..+++....-............... +. +.++++.++.+ ..+.+||..++..+.+
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~-~~-------~~~~l~s~~~d----------~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFN-QF-------NTNQLFVSSIR----------GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEE-TT-------EEEEEEEEETT----------TEEEEEETTSCEEEEE
T ss_pred CCeEEEEeCCCcccceeeecCCcCCceeEEEeC-CC-------CCCEEEEEeCC----------CEEEEEECCCCceEEE
Confidence 457889999887765433221111111122221 10 15666666554 4688999987666555
Q ss_pred cCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee-EEEE-CCE-EEEEEee
Q 046684 186 GSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT-LVSR-NQK-LTLIGGT 261 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~-~~~~-~g~-l~~~gg~ 261 (373)
..... .......+++. ++.+.+. +.....|..||+..+....+ . ....... +... ++. +++.++
T Consensus 157 ~~~~~------~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~- 224 (383)
T 3ei3_B 157 AKTDS------WDYWYCCVDVSVSRQMLAT-GDSTGRLLLLGLDGHEIFKE-K---LHKAKVTHAEFNPRCDWLMATSS- 224 (383)
T ss_dssp ECCCC------SSCCEEEEEEETTTTEEEE-EETTSEEEEEETTSCEEEEE-E---CSSSCEEEEEECSSCTTEEEEEE-
T ss_pred eccCC------CCCCeEEEEECCCCCEEEE-ECCCCCEEEEECCCCEEEEe-c---cCCCcEEEEEECCCCCCEEEEEe-
Confidence 43210 00001112222 4555555 34567899999965544444 1 1112222 2222 444 555554
Q ss_pred cCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec-CCEEEEEEcCCccEEEEEccccCC
Q 046684 262 CGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG-NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 262 ~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+..+.+|++.. ....-..+..+..... ........ ++..++.++..+.+.+||++ +.
T Consensus 225 ~d~~i~iwd~~~--~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~~l~~~~~d~~i~iwd~~--~~ 283 (383)
T 3ei3_B 225 VDATVKLWDLRN--IKDKNSYIAEMPHEKP----------VNAAYFNPTDSTKLLTTDQRNEIRVYSSY--DW 283 (383)
T ss_dssp TTSEEEEEEGGG--CCSTTCEEEEEECSSC----------EEEEEECTTTSCEEEEEESSSEEEEEETT--BT
T ss_pred CCCEEEEEeCCC--CCcccceEEEecCCCc----------eEEEEEcCCCCCEEEEEcCCCcEEEEECC--CC
Confidence 444589999976 2222223333321110 01222223 56677777777889999998 65
No 81
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.67 E-value=0.28 Score=42.59 Aligned_cols=232 Identities=9% Similarity=-0.018 Sum_probs=113.7
Q ss_pred eEEEEeCCCCCcccc-CCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCccc--ceeccCCCC------CCCCCCeE
Q 046684 64 CCYVHNPVSDKWHVL-SLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTR--QFRYLPLLN------VSRTNPAV 134 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~--~w~~lp~~~------~~~~~~~~ 134 (373)
.+..+|+.+.+.... ...............+|.+|+.+.. ...+.++|+..+ .-..+.... .....+..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~--~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA--LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT--TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC--CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 577788876654332 1111112222233347778887753 467999998765 223332111 11112222
Q ss_pred EEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCcc-ccccceeccCCceEEE-C-CEE
Q 046684 135 GIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVE-FAVRLTVWTPNESVCT-R-GML 211 (373)
Q Consensus 135 ~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~~~~~-~-g~l 211 (373)
.++. +. ++++|+..+.. ...+.+||.....-+.+...... ...+........+++- + |.+
T Consensus 148 ia~~-~~-------~g~lyv~d~~~---------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 148 VAVE-PS-------TGAVFVSDGYC---------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp EEEC-TT-------TCCEEEEECSS---------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred EEEe-CC-------CCeEEEEeCCC---------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 2222 10 17799887422 24688898644333322211000 0000011112223332 3 899
Q ss_pred EEEEcCCceEEEEEECCCCcEEecccCCC-CCCCceeEEEECCEEEEEEeec------CCceEEEEeecCCCCCCeEEEE
Q 046684 212 YWITSARAYSVIGFDIESNTWRELSAPMA-DRLEFATLVSRNQKLTLIGGTC------GGDACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 212 y~~gg~~~~~i~~yd~~~~~w~~~~~~~p-~~~~~~~~~~~~g~l~~~gg~~------~~~~~i~~~~~~~~~~~W~~v~ 284 (373)
|+.. .....|..||+++++.... ...+ ....-..++...|.++...|.. ...+.+|++.. .+...
T Consensus 211 ~v~d-~~~~~I~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~----g~~~~-- 282 (329)
T 3fvz_A 211 CVAD-RENGRIQCFKTDTKEFVRE-IKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS----GEIID-- 282 (329)
T ss_dssp EEEE-TTTTEEEEEETTTCCEEEE-ECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT----CCEEE--
T ss_pred EEEE-CCCCEEEEEECCCCcEEEE-EeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC----CeEEE--
Confidence 9884 4567899999997666543 2222 1112223333346666655431 11266777654 43332
Q ss_pred eechhhhhhhcCCCCCCCceEEEe-cCCEEEEEEcCCccEEEEEcc
Q 046684 285 KVPIEMGMRLSGGKASWGGTRCAA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 285 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.+..... ....+..++. .++.||+.+...+.|.+|+++
T Consensus 283 ~~~~~~~-------~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 283 VFKPVRK-------HFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECCSSS-------CCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEcCCCC-------ccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 2221000 0011344444 366999999888899999997
No 82
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.66 E-value=0.048 Score=51.42 Aligned_cols=193 Identities=6% Similarity=0.036 Sum_probs=97.3
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
..+|.+|+.+.. ...+.++|..|++.... ++.... .....+ .+.+ ..+|+.+ .+ ..
T Consensus 146 ~p~~~~~vs~~~--d~~V~v~D~~t~~~~~~--i~~g~~-~~~v~~-spdg-------~~l~v~~-~d----------~~ 201 (543)
T 1nir_A 146 DLPNLFSVTLRD--AGQIALVDGDSKKIVKV--IDTGYA-VHISRM-SASG-------RYLLVIG-RD----------AR 201 (543)
T ss_dssp CGGGEEEEEEGG--GTEEEEEETTTCCEEEE--EECSTT-EEEEEE-CTTS-------CEEEEEE-TT----------SE
T ss_pred CCCCEEEEEEcC--CCeEEEEECCCceEEEE--EecCcc-cceEEE-CCCC-------CEEEEEC-CC----------Ce
Confidence 447888887654 46789999999875431 111111 122212 2211 4566654 21 46
Q ss_pred EEEEEC--CCCceeeecCCCccccccceeccCCceEEE-----CCEEEEEEcCCceEEEEEECCCCcEEecccCCC----
Q 046684 172 VEMYDS--RHDAWQIIGSMPVEFAVRLTVWTPNESVCT-----RGMLYWITSARAYSVIGFDIESNTWRELSAPMA---- 240 (373)
Q Consensus 172 ~~~yd~--~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-----~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p---- 240 (373)
+.+||. .+.+ .+..++.. .....+++- +|+..+++......+..+|..+.+-... .+..
T Consensus 202 V~v~D~~~~t~~--~~~~i~~g-------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~-i~~~g~~~ 271 (543)
T 1nir_A 202 IDMIDLWAKEPT--KVAEIKIG-------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI-VSTRGMTV 271 (543)
T ss_dssp EEEEETTSSSCE--EEEEEECC-------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE-EECCEECS
T ss_pred EEEEECcCCCCc--EEEEEecC-------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccccee-ecccCccc
Confidence 899999 5543 22222111 111122332 5554334344467788999887754333 2221
Q ss_pred -------CCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCE
Q 046684 241 -------DRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGA 312 (373)
Q Consensus 241 -------~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (373)
..+. ..++. .++..+++.......+.+|++.+ .+-..+..++..... ....+...+..
T Consensus 272 ~~~~~~~~~~v-~~i~~s~~~~~~~vs~~~~g~i~vvd~~~----~~~l~~~~i~~~~~~---------~~~~~spdg~~ 337 (543)
T 1nir_A 272 DTQTYHPEPRV-AAIIASHEHPEFIVNVKETGKVLLVNYKD----IDNLTVTSIGAAPFL---------HDGGWDSSHRY 337 (543)
T ss_dssp SSCCEESCCCE-EEEEECSSSSEEEEEETTTTEEEEEECTT----SSSCEEEEEECCSSC---------CCEEECTTSCE
T ss_pred CccccccCCce-EEEEECCCCCEEEEEECCCCeEEEEEecC----CCcceeEEeccCcCc---------cCceECCCCCE
Confidence 1111 12222 23444555544444567777754 222223334322211 12333334556
Q ss_pred EEEEEcCCccEEEEEccccCCc
Q 046684 313 ICLYREVGLGMIIWREDEDKRK 334 (373)
Q Consensus 313 i~~~~~~~~~~~~yd~~~~~~~ 334 (373)
+|+.+..++.+.++|.+ +++
T Consensus 338 l~va~~~~~~v~v~D~~--tg~ 357 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSK--DRR 357 (543)
T ss_dssp EEEEEGGGTEEEEEETT--TTE
T ss_pred EEEEecCCCeEEEEECC--CCe
Confidence 77777667789999999 883
No 83
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.24 Score=43.06 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=64.1
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CC--EEEEEEeecCCceEEEEeecC--CCCCCeEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQ--KLTLIGGTCGGDACVWELSEG--GDDDIWCL 282 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g--~l~~~gg~~~~~~~i~~~~~~--~~~~~W~~ 282 (373)
++.+.+.+ .....|..+|..++.|..+ ..+..+......+.. .+ ..+++.+..+..+.+|++... .....|..
T Consensus 164 ~~~~l~s~-s~D~~i~iW~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 164 SEALLASS-SYDDTVRIWKDYDDDWECV-AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp SSSEEEEE-ETTSCEEEEEEETTEEEEE-EEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEE-cCCCeEEEEECCCCCeeEE-EEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence 45555443 4456788888887777655 333332222222222 21 234444445556899998651 01234666
Q ss_pred EEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEec
Q 046684 283 IEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 283 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
+..++..... ....+....+.+++.++..+.+.+||.. ++ +|+.+.
T Consensus 242 ~~~~~~~h~~---------~v~~v~~s~~~~l~s~~~dg~v~iw~~~--~~--~~~~~~ 287 (330)
T 2hes_X 242 EAILPDVHKR---------QVYNVAWGFNGLIASVGADGVLAVYEEV--DG--EWKVFA 287 (330)
T ss_dssp EEECCSCCSS---------CEEEEEECTTSCEEEEETTSCEEEEEEE--TT--EEEEEE
T ss_pred eeeccccccc---------ceEEEEEcCCCEEEEEeCCCEEEEEEcC--CC--ceEEEe
Confidence 5554421100 0123333344466667777789999999 88 886543
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.63 E-value=0.23 Score=42.68 Aligned_cols=191 Identities=9% Similarity=0.020 Sum_probs=93.8
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceec-cCCCCC-CCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRY-LPLLNV-SRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
.+|.+++.++ ...+.+||..+++... +..+.. ........+...+ +++.++.|+.+ .
T Consensus 61 ~~~~~l~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d----------~ 119 (337)
T 1gxr_A 61 NPTRHVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP--------DGCTLIVGGEA----------S 119 (337)
T ss_dssp SSSSEEEEEC---BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT--------TSSEEEEEESS----------S
T ss_pred cCCcEEEEcC---CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC--------CCCEEEEEcCC----------C
Confidence 3555555555 4788999988765322 221111 1111122222222 14455556543 4
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TL 248 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~ 248 (373)
.+.+||..+++......+.. ........++. ++...+.+ .....+..||+.+++.... ... ..... .+
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~~~~-~~~--~~~~i~~~ 189 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTS------SAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQ-FQG--HTDGASCI 189 (337)
T ss_dssp EEEEEECCCC--EEEEEEEC------SSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEE-ECC--CSSCEEEE
T ss_pred cEEEEECCCCCcceeeeccc------CCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCceeee-eec--ccCceEEE
Confidence 68999998877543332210 00000111222 45555553 3456799999988765433 221 11122 22
Q ss_pred EEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEE
Q 046684 249 VSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 249 ~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd 327 (373)
... ++..++.++ .+..+.+|++.. . +.+......... .......++..++++...+.+.+||
T Consensus 190 ~~~~~~~~l~~~~-~dg~i~~~d~~~----~--~~~~~~~~~~~v----------~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 190 DISNDGTKLWTGG-LDNTVRSWDLRE----G--RQLQQHDFTSQI----------FSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EECTTSSEEEEEE-TTSEEEEEETTT----T--EEEEEEECSSCE----------EEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEEe-cCCcEEEEECCC----C--ceEeeecCCCce----------EEEEECCCCCEEEEEcCCCcEEEEE
Confidence 222 566666554 344578998864 3 233332211100 1222334566666777777899999
Q ss_pred ccccCC
Q 046684 328 EDEDKR 333 (373)
Q Consensus 328 ~~~~~~ 333 (373)
.+ ++
T Consensus 253 ~~--~~ 256 (337)
T 1gxr_A 253 VN--KP 256 (337)
T ss_dssp TT--SS
T ss_pred CC--CC
Confidence 98 76
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.61 E-value=0.047 Score=49.66 Aligned_cols=185 Identities=11% Similarity=0.089 Sum_probs=93.8
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.|+. ...+.+||..+++-... +..... .+..+.. + +++++.|+.+ ..+.
T Consensus 142 d~~~l~~g~~--dg~i~iwd~~~~~~~~~--~~~h~~--~v~~l~~----~-----~~~l~sg~~d----------g~i~ 196 (435)
T 1p22_A 142 DDQKIVSGLR--DNTIKIWDKNTLECKRI--LTGHTG--SVLCLQY----D-----ERVIITGSSD----------STVR 196 (435)
T ss_dssp CSSEEEEEES--SSCEEEEESSSCCEEEE--ECCCSS--CEEEEEC----C-----SSEEEEEETT----------SCEE
T ss_pred CCCEEEEEeC--CCeEEEEeCCCCeEEEE--EcCCCC--cEEEEEE----C-----CCEEEEEcCC----------CeEE
Confidence 4444444432 56799999988764332 111111 1222221 1 5566666654 4689
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECC
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQ 253 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g 253 (373)
+||..+++-...-... ......+..++...+.+ ...+.|..||+.+.+-................+..++
T Consensus 197 vwd~~~~~~~~~~~~h---------~~~v~~l~~~~~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 266 (435)
T 1p22_A 197 VWDVNTGEMLNTLIHH---------CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 266 (435)
T ss_dssp EEESSSCCEEEEECCC---------CSCEEEEECCTTEEEEE-ETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET
T ss_pred EEECCCCcEEEEEcCC---------CCcEEEEEEcCCEEEEe-eCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCC
Confidence 9998877532211110 01111223344444443 4567889999987643211011122222233344466
Q ss_pred EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 254 KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 254 ~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
..++.++. +..+.+|++.. . +.+..+..... ...+...++..++.++..+.+.+||.+ ++
T Consensus 267 ~~l~s~~~-dg~i~vwd~~~----~--~~~~~~~~~~~-----------~v~~~~~~~~~l~~g~~dg~i~iwd~~--~~ 326 (435)
T 1p22_A 267 KYIVSASG-DRTIKVWNTST----C--EFVRTLNGHKR-----------GIACLQYRDRLVVSGSSDNTIRLWDIE--CG 326 (435)
T ss_dssp TEEEEEET-TSEEEEEETTT----C--CEEEEEECCSS-----------CEEEEEEETTEEEEEETTSCEEEEETT--TC
T ss_pred CEEEEEeC-CCeEEEEECCc----C--cEEEEEcCCCC-----------cEEEEEeCCCEEEEEeCCCeEEEEECC--CC
Confidence 66666543 44578999865 2 23333321110 233334455666777777789999998 76
No 86
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.57 E-value=0.32 Score=42.09 Aligned_cols=216 Identities=7% Similarity=-0.017 Sum_probs=112.6
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEe--eCcEEEEeeCCCCceEEEEEcCcc----cceec-cC-CCCCCCCCCeE
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSS--IGSFLLLRPINSTILQLVLCNPFT----RQFRY-LP-LLNVSRTNPAV 134 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~--~~g~l~~~gg~~~~~~~~v~np~t----~~w~~-lp-~~~~~~~~~~~ 134 (373)
..+...|..+.....+- +...+ ...++. .++.||+.... ...+.++++.+ ..... ++ .+.. ...+
T Consensus 10 ~~I~~i~~~~~~~~~~~-~~~~~-p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~---p~gl 82 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI-PNLRN-VVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA---PDGL 82 (316)
T ss_dssp SSEEEEETTSCCCEEEE-CSCSS-EEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC---CCEE
T ss_pred CeEEEEECCCcceEehh-cCCCc-eEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCC---cCEE
Confidence 34666787776554431 11111 223333 37889998763 46889999876 22222 21 1111 1233
Q ss_pred EEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEE
Q 046684 135 GIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLY 212 (373)
Q Consensus 135 ~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly 212 (373)
++-... ++||+.-.. ...+++++.....-+.+..... . ....+++- +|.||
T Consensus 83 avd~~~---------~~ly~~d~~----------~~~I~~~~~~g~~~~~~~~~~~-----~---~P~~iavdp~~g~ly 135 (316)
T 1ijq_A 83 AVDWIH---------SNIYWTDSV----------LGTVSVADTKGVKRKTLFRENG-----S---KPRAIVVDPVHGFMY 135 (316)
T ss_dssp EEETTT---------TEEEEEETT----------TTEEEEEETTSSSEEEEEECTT-----C---CEEEEEEETTTTEEE
T ss_pred EEeecC---------CeEEEEECC----------CCEEEEEeCCCCceEEEEECCC-----C---CcceEEeCCCCCEEE
Confidence 332111 778887432 2468888886544332221100 0 11223442 68999
Q ss_pred EEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhh
Q 046684 213 WITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEM 290 (373)
Q Consensus 213 ~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~ 290 (373)
|........|..+++....-+.+ ..... ..-.+++.- +++||+..... ..+..++++. ..=+.+.......
T Consensus 136 ~~d~~~~~~I~~~~~dG~~~~~~-~~~~~-~~P~gla~d~~~~~lY~~D~~~-~~I~~~d~dg----~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 136 WTDWGTPAKIKKGGLNGVDIYSL-VTENI-QWPNGITLDLLSGRLYWVDSKL-HSISSIDVNG----GNRKTILEDEKRL 208 (316)
T ss_dssp EEECSSSCEEEEEETTSCCEEEE-ECSSC-SCEEEEEEETTTTEEEEEETTT-TEEEEEETTS----CSCEEEEECTTTT
T ss_pred EEccCCCCeEEEEcCCCCCeEEE-EECCC-CCceEEEEeccCCEEEEEECCC-CeEEEEecCC----CceEEEeecCCcc
Confidence 98533347899999976554444 22111 112244443 68999986432 2345555532 2222332221111
Q ss_pred hhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 291 GMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++..++.||+.......|..+|+.
T Consensus 209 ----------~~P~giav~~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 209 ----------AHPFSLAVFEDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp ----------SSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ----------CCcEEEEEECCEEEEEECCCCeEEEEeCC
Confidence 11566666789999999888889999986
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.54 E-value=0.38 Score=42.55 Aligned_cols=113 Identities=12% Similarity=-0.005 Sum_probs=56.2
Q ss_pred EEEEcCCceEEEEEECCCCcEEecccCC-CCC---CCceeEEEE--CCEEEEEEeecC--CceEEEEeecCCCCCCeEEE
Q 046684 212 YWITSARAYSVIGFDIESNTWRELSAPM-ADR---LEFATLVSR--NQKLTLIGGTCG--GDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 212 y~~gg~~~~~i~~yd~~~~~w~~~~~~~-p~~---~~~~~~~~~--~g~l~~~gg~~~--~~~~i~~~~~~~~~~~W~~v 283 (373)
+++.+.....+..||+.+.+-... ... ... ......+.. ++.++++++.++ ..+.+|++.. . +.+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~----~--~~~ 271 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYN-FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF----G--ERI 271 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEE-EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT----C--CEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEE-EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC----C--ccc
Confidence 444456678899999987754333 121 001 122222222 566666665542 3478998864 2 333
Q ss_pred Eeechhhhh--hhcCC--CCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 284 EKVPIEMGM--RLSGG--KASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 284 ~~~p~~~~~--~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
..+...... ..... ........+...++..++.++..+.+.+||.+ +.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~ 323 (397)
T 1sq9_A 272 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK--TK 323 (397)
T ss_dssp EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TT
T ss_pred ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC--CC
Confidence 333321000 00000 00000122222356677777777889999999 76
No 88
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.53 E-value=0.19 Score=45.67 Aligned_cols=185 Identities=9% Similarity=0.033 Sum_probs=93.3
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCccc
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYE 169 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~ 169 (373)
+...+++++..+. ...+.+||..+++-... +............. +.+++.|+.+
T Consensus 125 ~~~~g~~l~sg~~---dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~-----------~~~l~s~~~d---------- 178 (445)
T 2ovr_B 125 LQFCGNRIVSGSD---DNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMR-----------DNIIISGSTD---------- 178 (445)
T ss_dssp EEEETTEEEEEET---TSCEEEEETTTCCEEEE--CCCCSSCEEEEEEE-----------TTEEEEEETT----------
T ss_pred EEEcCCEEEEEEC---CCcEEEEECCCCcEEEE--EcCCCCCEEEEEec-----------CCEEEEEeCC----------
Confidence 4445665555554 57899999988764321 11111111222222 3355556554
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEE
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLV 249 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~ 249 (373)
..+.+||..+++-...-.. + ......+..++...+.+ .....+..||+.+++-... .. ........+
T Consensus 179 g~i~vwd~~~~~~~~~~~~-------h--~~~v~~~~~~~~~l~s~-s~dg~i~~wd~~~~~~~~~-~~--~~~~~v~~~ 245 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLYG-------H--TSTVRCMHLHEKRVVSG-SRDATLRVWDIETGQCLHV-LM--GHVAAVRCV 245 (445)
T ss_dssp SCEEEEETTTTEEEEEECC-------C--SSCEEEEEEETTEEEEE-ETTSEEEEEESSSCCEEEE-EE--CCSSCEEEE
T ss_pred CeEEEEECCcCcEEEEECC-------C--CCcEEEEEecCCEEEEE-eCCCEEEEEECCCCcEEEE-Ec--CCcccEEEE
Confidence 3688999887653221111 0 01111233344444443 4567899999987754332 11 122223334
Q ss_pred EECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 250 SRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 250 ~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..++..++.++. +..+.+|++.. . +.+..+..... ...+...++..++.++..+.+.+||++
T Consensus 246 ~~~~~~l~~~~~-dg~i~iwd~~~----~--~~~~~~~~~~~-----------~v~~~~~~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 246 QYDGRRVVSGAY-DFMVKVWDPET----E--TCLHTLQGHTN-----------RVYSLQFDGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EECSSCEEEEET-TSCEEEEEGGG----T--EEEEEECCCSS-----------CEEEEEECSSEEEEEETTSCEEEEETT
T ss_pred EECCCEEEEEcC-CCEEEEEECCC----C--cEeEEecCCCC-----------ceEEEEECCCEEEEEeCCCeEEEEECC
Confidence 447777666654 34578998865 2 33333331110 122222245555556566667777777
Q ss_pred ccCC
Q 046684 330 EDKR 333 (373)
Q Consensus 330 ~~~~ 333 (373)
++
T Consensus 308 --~~ 309 (445)
T 2ovr_B 308 --TG 309 (445)
T ss_dssp --TC
T ss_pred --CC
Confidence 65
No 89
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.43 E-value=0.41 Score=46.41 Aligned_cols=116 Identities=13% Similarity=0.145 Sum_probs=70.9
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCC--------CCCCeEEEEEcCCCCCCCCCceEEEEEeccC
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVS--------RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMS 159 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~ 159 (373)
-...+|.||+... ...++.+|+.|++ |+.-+..+.. ......++.+ ++||+....
T Consensus 73 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~-----------~~v~v~~~d- 137 (677)
T 1kb0_A 73 PVVVDGIMYVSAS---WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK-----------GKVYVGAWD- 137 (677)
T ss_dssp CEEETTEEEEECG---GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET-----------TEEEEECTT-
T ss_pred CEEECCEEEEECC---CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC-----------CEEEEEcCC-
Confidence 3457999999876 4678999999876 7653332210 1112233332 778775322
Q ss_pred CCCCCCCcccceEEEEECCCCc--eeeecC-CCccccccceeccCCceEEECCEEEEEEcC----CceEEEEEECCCCc-
Q 046684 160 DEPRGGATYESMVEMYDSRHDA--WQIIGS-MPVEFAVRLTVWTPNESVCTRGMLYWITSA----RAYSVIGFDIESNT- 231 (373)
Q Consensus 160 ~~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~~i~~yd~~~~~- 231 (373)
..+..+|.++++ |+.-.. -+. .........++.++.+|+.... ....|.+||.++++
T Consensus 138 ----------g~l~alD~~tG~~~W~~~~~~~~~-----~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 138 ----------GRLIALDAATGKEVWHQNTFEGQK-----GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp ----------SEEEEEETTTCCEEEEEETTTTCC-----SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ----------CEEEEEECCCCCEEeeecCCcCcC-----cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcE
Confidence 368999998876 876543 110 0111223446778999886422 25789999998874
Q ss_pred -EEec
Q 046684 232 -WREL 235 (373)
Q Consensus 232 -w~~~ 235 (373)
|+.-
T Consensus 203 ~W~~~ 207 (677)
T 1kb0_A 203 KWRWF 207 (677)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 7654
No 90
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.43 E-value=0.12 Score=43.10 Aligned_cols=188 Identities=9% Similarity=0.010 Sum_probs=93.4
Q ss_pred eeCcEEEE-eeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 92 SIGSFLLL-RPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 92 ~~~g~l~~-~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
..+|.+|+ .... ...+.++|+.+.....++.... .....+++ . + + +++|+... . .
T Consensus 32 ~~~g~l~v~~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~-~-~---~-----g~l~v~~~-~----------~ 87 (270)
T 1rwi_B 32 DSAGNVYVTSEGM--YGRVVKLATGSTGTTVLPFNGL-YQPQGLAV-D-G---A-----GTVYVTDF-N----------N 87 (270)
T ss_dssp CTTCCEEEEECSS--SCEEEEECC-----EECCCCSC-CSCCCEEE-C-T---T-----CCEEEEET-T----------T
T ss_pred CCCCCEEEEccCC--CCcEEEecCCCcccceEeeCCc-CCcceeEE-C-C---C-----CCEEEEcC-C----------C
Confidence 34677888 5332 4678999998876554432211 11122222 2 1 1 56888653 2 3
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLV 249 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~ 249 (373)
.+.+||..++.-+...... .......++- +|.+|+.. .....|..||..+...... .. .....-..++
T Consensus 88 ~i~~~d~~~~~~~~~~~~~--------~~~p~~i~~~~~g~l~v~~-~~~~~i~~~~~~~~~~~~~-~~-~~~~~p~~i~ 156 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDG--------LNYPEGLAVDTQGAVYVAD-RGNNRVVKLAAGSKTQTVL-PF-TGLNDPDGVA 156 (270)
T ss_dssp EEEEECTTCSCCEECCCCS--------CSSEEEEEECTTCCEEEEE-GGGTEEEEECTTCCSCEEC-CC-CSCCSCCCEE
T ss_pred EEEEEeCCCceEeeeecCC--------cCCCcceEECCCCCEEEEE-CCCCEEEEEECCCceeEee-cc-ccCCCceeEE
Confidence 6888998776544332110 0011122222 57888874 3356788898766554333 11 1111112344
Q ss_pred EE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec-CCEEEEEEcCCccEEEEE
Q 046684 250 SR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG-NGAICLYREVGLGMIIWR 327 (373)
Q Consensus 250 ~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd 327 (373)
.. +|+||+..... ..+.+|+++. ..-.. ...... ..+..++.. ++.||+.....+.+..||
T Consensus 157 ~~~~g~l~v~~~~~-~~i~~~~~~~----~~~~~--~~~~~~----------~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 157 VDNSGNVYVTDTDN-NRVVKLEAES----NNQVV--LPFTDI----------TAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp ECTTCCEEEEEGGG-TEEEEECTTT----CCEEE--CCCSSC----------CSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred EeCCCCEEEEECCC-CEEEEEecCC----CceEe--ecccCC----------CCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 33 67888876432 2345555432 22111 111000 013344443 568999887777899999
Q ss_pred ccccCC
Q 046684 328 EDEDKR 333 (373)
Q Consensus 328 ~~~~~~ 333 (373)
++ .+
T Consensus 220 ~~--~~ 223 (270)
T 1rwi_B 220 AG--ST 223 (270)
T ss_dssp TT--CS
T ss_pred CC--CC
Confidence 98 66
No 91
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.43 E-value=0.3 Score=42.25 Aligned_cols=212 Identities=8% Similarity=0.045 Sum_probs=101.3
Q ss_pred eeEEEEeCCCCCccc-cCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~ 141 (373)
..+..+|..+.+-.. +.......... ..+.+|..++.++. ...+.+||..+++-... +... .....++...+
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~-~~spdg~~l~~g~~--dg~v~i~~~~~~~~~~~--~~~~-~~~v~~~~~sp- 174 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTL-AFSPDSQYLATGTH--VGKVNIFGVESGKKEYS--LDTR-GKFILSIAYSP- 174 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCE-EECTTSSEEEEECT--TSEEEEEETTTCSEEEE--EECS-SSCEEEEEECT-
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEE-EECCCCCEEEEEcC--CCcEEEEEcCCCceeEE--ecCC-CceEEEEEECC-
Confidence 455567776553321 11111111111 22334444444443 46788888877653221 1111 11112222211
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceee-ecCCCccccccceeccCCceEEE-CCEEEEEEcCCc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARA 219 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~ 219 (373)
+++.++.|+.+ ..+.+||.++++-.. +... ...-..+++. +|.+.+. +...
T Consensus 175 -------dg~~lasg~~d----------g~i~iwd~~~~~~~~~~~~h---------~~~v~~l~~spd~~~l~s-~s~d 227 (321)
T 3ow8_A 175 -------DGKYLASGAID----------GIINIFDIATGKLLHTLEGH---------AMPIRSLTFSPDSQLLVT-ASDD 227 (321)
T ss_dssp -------TSSEEEEEETT----------SCEEEEETTTTEEEEEECCC---------SSCCCEEEECTTSCEEEE-ECTT
T ss_pred -------CCCEEEEEcCC----------CeEEEEECCCCcEEEEEccc---------CCceeEEEEcCCCCEEEE-EcCC
Confidence 15666666554 358899988765321 1111 0011122222 4555555 4456
Q ss_pred eEEEEEECCCCcEEecccCCCCCCCce-eEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCC
Q 046684 220 YSVIGFDIESNTWRELSAPMADRLEFA-TLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~ 297 (373)
..|..||+.+.+.... +....... .++.. +|..++.++ .+..+.+|++.. .+.+..+..-...
T Consensus 228 g~i~iwd~~~~~~~~~---~~~h~~~v~~~~~sp~~~~l~s~s-~D~~v~iwd~~~------~~~~~~~~~h~~~----- 292 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGT---LSGHASWVLNVAFCPDDTHFVSSS-SDKSVKVWDVGT------RTCVHTFFDHQDQ----- 292 (321)
T ss_dssp SCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT------TEEEEEECCCSSC-----
T ss_pred CeEEEEECCCcceeEE---EcCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCC------CEEEEEEcCCCCc-----
Confidence 7799999987655432 11111112 22222 566655554 444589999854 3444444221100
Q ss_pred CCCCCceEEE-ecCCEEEEEEcCCccEEEEEc
Q 046684 298 KASWGGTRCA-AGNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 298 ~~~~~~~~~~-~~~~~i~~~~~~~~~~~~yd~ 328 (373)
...+. ..++..++.++..+.+.+||.
T Consensus 293 -----v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 293 -----VWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp -----EEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred -----EEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 12222 235566667777778988885
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.21 Score=44.55 Aligned_cols=145 Identities=8% Similarity=-0.070 Sum_probs=70.1
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
..++.+++.+. ...+.+||..+++-... +............. +. ++.++.++.+ ..
T Consensus 215 ~~~~~~~~~~~---~g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~-~~--------~~~l~~~~~d----------~~ 270 (425)
T 1r5m_A 215 VDDDKFVIPGP---KGAIFVYQITEKTPTGK--LIGHHGPISVLEFN-DT--------NKLLLSASDD----------GT 270 (425)
T ss_dssp EETTEEEEECG---GGCEEEEETTCSSCSEE--ECCCSSCEEEEEEE-TT--------TTEEEEEETT----------SC
T ss_pred cCCCEEEEEcC---CCeEEEEEcCCCceeee--eccCCCceEEEEEC-CC--------CCEEEEEcCC----------CE
Confidence 44666555444 56799999988653221 11111111112222 11 4455555543 35
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS 250 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~ 250 (373)
+.+||..+++-...-.. .......+++. ++ .++. +.....+..||+.+.+-... ...... .-..+..
T Consensus 271 i~i~d~~~~~~~~~~~~--------~~~~i~~~~~~~~~-~l~~-~~~d~~i~i~d~~~~~~~~~-~~~~~~-~i~~~~~ 338 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYG--------HSQSIVSASWVGDD-KVIS-CSMDGSVRLWSLKQNTLLAL-SIVDGV-PIFAGRI 338 (425)
T ss_dssp EEEECSSSBSCSEEECC--------CSSCEEEEEEETTT-EEEE-EETTSEEEEEETTTTEEEEE-EECTTC-CEEEEEE
T ss_pred EEEEECCCCccceEecC--------CCccEEEEEECCCC-EEEE-EeCCCcEEEEECCCCcEeEe-cccCCc-cEEEEEE
Confidence 88898876542211110 00011122333 45 3333 34567899999987764333 121111 1112222
Q ss_pred -ECCEEEEEEeecCCceEEEEeec
Q 046684 251 -RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 251 -~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
-++.++++++ .+..+.+|++..
T Consensus 339 s~~~~~l~~~~-~dg~i~i~~~~~ 361 (425)
T 1r5m_A 339 SQDGQKYAVAF-MDGQVNVYDLKK 361 (425)
T ss_dssp CTTSSEEEEEE-TTSCEEEEECHH
T ss_pred cCCCCEEEEEE-CCCeEEEEECCC
Confidence 2566666654 344589999875
No 93
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.40 E-value=0.32 Score=42.08 Aligned_cols=144 Identities=9% Similarity=0.026 Sum_probs=76.1
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceee-ecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~ 227 (373)
..+++.|+.+ ..+.++|..+++-.. +..-+ ......++ -+|...+. +.....+..||.
T Consensus 92 ~~~l~s~s~D----------~~i~lWd~~~~~~~~~~~~~~---------~~~~~~~~spdg~~l~~-g~~dg~v~i~~~ 151 (321)
T 3ow8_A 92 LPIAASSSLD----------AHIRLWDLENGKQIKSIDAGP---------VDAWTLAFSPDSQYLAT-GTHVGKVNIFGV 151 (321)
T ss_dssp SSEEEEEETT----------SEEEEEETTTTEEEEEEECCT---------TCCCCEEECTTSSEEEE-ECTTSEEEEEET
T ss_pred CCEEEEEeCC----------CcEEEEECCCCCEEEEEeCCC---------ccEEEEEECCCCCEEEE-EcCCCcEEEEEc
Confidence 4456666554 468899988765322 11111 01111222 24555555 455678889998
Q ss_pred CCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE
Q 046684 228 ESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC 306 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 306 (373)
++++-... ..... .....++. -+|++++.++ .+..+.+|++.. . +.+..+.... ......+
T Consensus 152 ~~~~~~~~-~~~~~-~~v~~~~~spdg~~lasg~-~dg~i~iwd~~~----~--~~~~~~~~h~---------~~v~~l~ 213 (321)
T 3ow8_A 152 ESGKKEYS-LDTRG-KFILSIAYSPDGKYLASGA-IDGIINIFDIAT----G--KLLHTLEGHA---------MPIRSLT 213 (321)
T ss_dssp TTCSEEEE-EECSS-SCEEEEEECTTSSEEEEEE-TTSCEEEEETTT----T--EEEEEECCCS---------SCCCEEE
T ss_pred CCCceeEE-ecCCC-ceEEEEEECCCCCEEEEEc-CCCeEEEEECCC----C--cEEEEEcccC---------CceeEEE
Confidence 87654322 11111 11112222 2566666654 344579999864 3 3344433211 0002333
Q ss_pred EecCCEEEEEEcCCccEEEEEccccCC
Q 046684 307 AAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...++.+++.++..+.+.+||.+ +.
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~--~~ 238 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQ--HA 238 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETT--TC
T ss_pred EcCCCCEEEEEcCCCeEEEEECC--Cc
Confidence 44467777888888889999999 76
No 94
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.39 E-value=0.099 Score=49.52 Aligned_cols=195 Identities=8% Similarity=0.004 Sum_probs=100.8
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceec-cCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRY-LPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
.++++|+.... .+.+.++|+.|++-.. ++ .....+.+. + .+.+ ..+|+.+ .+ ..
T Consensus 165 ~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~---~g~~p~~v~-~-SpDG-------r~lyv~~-~d----------g~ 219 (567)
T 1qks_A 165 LENLFSVTLRD--AGQIALIDGSTYEIKTVLD---TGYAVHISR-L-SASG-------RYLFVIG-RD----------GK 219 (567)
T ss_dssp GGGEEEEEETT--TTEEEEEETTTCCEEEEEE---CSSCEEEEE-E-CTTS-------CEEEEEE-TT----------SE
T ss_pred CCceEEEEeCC--CCeEEEEECCCCeEEEEEe---CCCCccceE-E-CCCC-------CEEEEEc-CC----------Ce
Confidence 36778887654 5789999999987543 32 221112222 2 2211 4577654 22 36
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEE-----CC-EEEEEEcCCceEEEEEECCCCcEEecccCCC-----
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-----RG-MLYWITSARAYSVIGFDIESNTWRELSAPMA----- 240 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-----~g-~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p----- 240 (373)
+.+||..+.+-+.+..++.+ . ....+++- +| .+|+. ....+.+.++|..+.+-... .+..
T Consensus 220 V~viD~~~~t~~~v~~i~~G----~---~P~~ia~s~~~~pDGk~l~v~-n~~~~~v~ViD~~t~~~~~~-i~~~~~~~~ 290 (567)
T 1qks_A 220 VNMIDLWMKEPTTVAEIKIG----S---EARSIETSKMEGWEDKYAIAG-AYWPPQYVIMDGETLEPKKI-QSTRGMTYD 290 (567)
T ss_dssp EEEEETTSSSCCEEEEEECC----S---EEEEEEECCSTTCTTTEEEEE-EEETTEEEEEETTTCCEEEE-EECCEECTT
T ss_pred EEEEECCCCCCcEeEEEecC----C---CCceeEEccccCCCCCEEEEE-EccCCeEEEEECCCCcEEEE-Eeccccccc
Confidence 99999852222333333211 1 11223443 56 45555 45567888999877654332 1211
Q ss_pred ------CCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEE
Q 046684 241 ------DRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAI 313 (373)
Q Consensus 241 ------~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 313 (373)
..+. ..++. .++..+++.-.... .+|..+. .......+..++...+.+ ...+...+..+
T Consensus 291 ~~~~~p~~rv-a~i~~s~~~~~~vv~~~~~g--~v~~vd~--~~~~~~~v~~i~~~~~~~---------d~~~~pdgr~~ 356 (567)
T 1qks_A 291 EQEYHPEPRV-AAILASHYRPEFIVNVKETG--KILLVDY--TDLNNLKTTEISAERFLH---------DGGLDGSHRYF 356 (567)
T ss_dssp TCCEESCCCE-EEEEECSSSSEEEEEETTTT--EEEEEET--TCSSEEEEEEEECCSSEE---------EEEECTTSCEE
T ss_pred cccccCCCce-EEEEEcCCCCEEEEEecCCC--eEEEEec--CCCccceeeeeecccccc---------CceECCCCCEE
Confidence 1111 12222 23455555443333 4444443 335555666665443321 12333345667
Q ss_pred EEEEcCCccEEEEEccccCCcccE
Q 046684 314 CLYREVGLGMIIWREDEDKRKWEW 337 (373)
Q Consensus 314 ~~~~~~~~~~~~yd~~~~~~~~~W 337 (373)
|+....++.+.++|.+ +++...
T Consensus 357 ~va~~~sn~V~ViD~~--t~kl~~ 378 (567)
T 1qks_A 357 ITAANARNKLVVIDTK--EGKLVA 378 (567)
T ss_dssp EEEEGGGTEEEEEETT--TTEEEE
T ss_pred EEEeCCCCeEEEEECC--CCcEEE
Confidence 7777777889999999 884433
No 95
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.38 E-value=0.42 Score=46.43 Aligned_cols=116 Identities=13% Similarity=0.173 Sum_probs=70.8
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCC--------CCCCeEEEEEcCCCCCCCCCceEEEEEeccC
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVS--------RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMS 159 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~ 159 (373)
-...+|.||+... ...++.+|..|++ |+.-+..+.. ....+.++.+ ++||+.. .+
T Consensus 66 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~v~v~~-~d 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGP---FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK-----------GKVYVGV-LD 130 (689)
T ss_dssp CEEETTEEEEECG---GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET-----------TEEEEEC-TT
T ss_pred CEEECCEEEEEcC---CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC-----------CEEEEEc-cC
Confidence 3467999999876 4679999999886 7653322210 0111223332 7777753 22
Q ss_pred CCCCCCCcccceEEEEECCCCc--eeeecC-CCccccccceeccCCceEEECCEEEEEEcC----CceEEEEEECCCCc-
Q 046684 160 DEPRGGATYESMVEMYDSRHDA--WQIIGS-MPVEFAVRLTVWTPNESVCTRGMLYWITSA----RAYSVIGFDIESNT- 231 (373)
Q Consensus 160 ~~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~~i~~yd~~~~~- 231 (373)
..+..+|.++++ |+.-.. -+. .......+.++.+|.+|+-.+. ....+.+||.++++
T Consensus 131 ----------g~l~AlDa~TG~~~W~~~~~~~~~-----~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 131 ----------GRLEAIDAKTGQRAWSVDTRADHK-----RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp ----------SEEEEEETTTCCEEEEEECCSCTT-----SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ----------CEEEEEECCCCCEeeeecCcCCCC-----CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 368999998876 876543 110 1112223446789999885321 25789999999875
Q ss_pred -EEec
Q 046684 232 -WREL 235 (373)
Q Consensus 232 -w~~~ 235 (373)
|+.-
T Consensus 196 ~W~~~ 200 (689)
T 1yiq_A 196 AWRFY 200 (689)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 7754
No 96
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.33 E-value=0.1 Score=45.70 Aligned_cols=193 Identities=10% Similarity=0.082 Sum_probs=93.2
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|.+++.++. ...+.+||..++++.....+.........++...+ +++.++.|+.+ ..+.
T Consensus 27 ~g~~las~~~--D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--------~g~~l~s~s~D----------~~v~ 86 (345)
T 3fm0_A 27 AGTLLASCGG--DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--------CGNYLASASFD----------ATTC 86 (345)
T ss_dssp TSSCEEEEET--TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT--------TSSEEEEEETT----------SCEE
T ss_pred CCCEEEEEcC--CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC--------CCCEEEEEECC----------CcEE
Confidence 4444444432 45688888887776432221111111111222221 15566666554 3577
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCC-cEEecccCCCCCCCcee-EEE
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESN-TWRELSAPMADRLEFAT-LVS 250 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~-~w~~~~~~~p~~~~~~~-~~~ 250 (373)
+||..++.++.+..+.. ....-..+++. +|.+.+.+ .....|..+|+.++ ....+ ..+........ ++.
T Consensus 87 iw~~~~~~~~~~~~~~~------h~~~v~~v~~sp~~~~l~s~-s~D~~v~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEG------HENEVKSVAWAPSGNLLATC-SRDKSVWVWEVDEEDEYECV-SVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEEECCC-EEEEEEECC------CSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECTTSCEEEE-EEECCCCSCEEEEEE
T ss_pred EEEccCCCeEEEEEccC------CCCCceEEEEeCCCCEEEEE-ECCCeEEEEECCCCCCeEEE-EEecCcCCCeEEEEE
Confidence 88877776654433310 00000111222 45555554 34567888888764 33333 12222222222 222
Q ss_pred -ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEc
Q 046684 251 -RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 251 -~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~ 328 (373)
-++.+++.++ .+..+.+|+... ..|..+..+..-... .....+..++..++.++.++.+.+||.
T Consensus 159 ~p~~~~l~s~s-~d~~i~~w~~~~----~~~~~~~~~~~h~~~---------v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 159 HPSQELLASAS-YDDTVKLYREEE----DDWVCCATLEGHEST---------VWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CSSSSCEEEEE-TTSCEEEEEEET----TEEEEEEEECCCSSC---------EEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEEe-CCCcEEEEEecC----CCEEEEEEecCCCCc---------eEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 2566555554 444579999976 777766555421100 012222335666677777777888875
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.32 E-value=0.35 Score=47.64 Aligned_cols=219 Identities=7% Similarity=-0.027 Sum_probs=102.7
Q ss_pred eeEEEEeCCCCCccc-cCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceec-cCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRY-LPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~~~~~~~~~~~~~~~~~ 140 (373)
..+..||..+..... +.....+-... .-+.+|..++.++. ...+.+||..+++... +.... .. -..+...+
T Consensus 35 g~v~iwd~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~---~~-v~~~~~s~ 107 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVTETPVRAG-KFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEAHP---DY-IRSIAVHP 107 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEE-EEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEECCS---SC-EEEEEECS
T ss_pred CEEEEEECCCCceEEEEecCCCcEEEE-EEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEecCC---CC-EEEEEEeC
Confidence 456678876654322 22111111111 22334443443432 5789999998887543 22111 11 11122211
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~ 218 (373)
+++.++.|+.+ ..+.+||..++ |.....+. .....-..+++. ++...+.+ ..
T Consensus 108 --------~~~~l~~~~~d----------g~i~vw~~~~~-~~~~~~~~------~~~~~v~~~~~~p~~~~~l~~~-~~ 161 (814)
T 3mkq_A 108 --------TKPYVLSGSDD----------LTVKLWNWENN-WALEQTFE------GHEHFVMCVAFNPKDPSTFASG-CL 161 (814)
T ss_dssp --------SSSEEEEEETT----------SEEEEEEGGGT-SEEEEEEE------CCSSCEEEEEEETTEEEEEEEE-ET
T ss_pred --------CCCEEEEEcCC----------CEEEEEECCCC-ceEEEEEc------CCCCcEEEEEEEcCCCCEEEEE-eC
Confidence 14445555443 46888998765 22221110 000011122333 35555553 45
Q ss_pred ceEEEEEECCCCcEEecccCCCCCCCceeEEEE---CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhc
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRLEFATLVSR---NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLS 295 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~---~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~ 295 (373)
...|..||+.+.+-... ...........+... ++.++++++ .+..+.+|++.. . ..+..+......
T Consensus 162 dg~v~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~----~--~~~~~~~~~~~~--- 230 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFT-LTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQT----K--SCVATLEGHMSN--- 230 (814)
T ss_dssp TSEEEEEETTCSSCSEE-EECCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTT----T--EEEEEEECCSSC---
T ss_pred CCeEEEEECCCCcceeE-EecCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCC----C--cEEEEEcCCCCC---
Confidence 67899999876543222 111111111222222 566666654 344578998854 2 333333211100
Q ss_pred CCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 296 GGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....+...++.+++.++..+.+.+||+. +.
T Consensus 231 ------v~~~~~~~~~~~l~~~~~dg~v~vwd~~--~~ 260 (814)
T 3mkq_A 231 ------VSFAVFHPTLPIIISGSEDGTLKIWNSS--TY 260 (814)
T ss_dssp ------EEEEEECSSSSEEEEEETTSCEEEEETT--TC
T ss_pred ------EEEEEEcCCCCEEEEEeCCCeEEEEECC--CC
Confidence 0122333455677777777789999999 76
No 98
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.32 E-value=0.45 Score=41.39 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=57.1
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++.+.+.| .....|..+|+.+++-... .. .+.... .++. -++.+++.++ .+..+.+|++.. . ..+..
T Consensus 195 ~~~~l~sg-~~d~~v~~wd~~~~~~~~~-~~--~h~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~----~--~~~~~ 263 (340)
T 1got_B 195 DTRLFVSG-ACDASAKLWDVREGMCRQT-FT--GHESDINAICFFPNGNAFATGS-DDATCRLFDLRA----D--QELMT 263 (340)
T ss_dssp TSSEEEEE-ETTSCEEEEETTTCSEEEE-EC--CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT----T--EEEEE
T ss_pred CCCEEEEE-eCCCcEEEEECCCCeeEEE-Ec--CCcCCEEEEEEcCCCCEEEEEc-CCCcEEEEECCC----C--cEEEE
Confidence 45555554 4567788999987654322 11 111112 2222 2566666655 444579999865 2 22322
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....... ... .......++.+++.++..+.+.+||.. +.
T Consensus 264 ~~~~~~~---~~v----~~~~~s~~g~~l~~g~~d~~i~vwd~~--~~ 302 (340)
T 1got_B 264 YSHDNII---CGI----TSVSFSKSGRLLLAGYDDFNCNVWDAL--KA 302 (340)
T ss_dssp ECCTTCC---SCE----EEEEECTTSSEEEEEETTSEEEEEETT--TC
T ss_pred EccCCcc---cce----EEEEECCCCCEEEEECCCCeEEEEEcc--cC
Confidence 2211100 000 122333467788888888889999998 66
No 99
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.32 E-value=0.51 Score=41.52 Aligned_cols=216 Identities=7% Similarity=-0.021 Sum_probs=115.7
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE--eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS--SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~--~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..+..+++.......+.. ...+ ...++ ..++.||+.... ...++.+++.....+.+..... ....++++-...
T Consensus 53 ~~I~~i~~~g~~~~~~~~-~~~~-~~~l~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~ 127 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLN-NLEN-AIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVH 127 (349)
T ss_dssp SCEEEECTTSCCEEEEEC-SCSC-EEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTT
T ss_pred cceEEEeCCCCeeEEeec-CCCc-eEEEEEeccccEEEEEecc--CCceEEEecCCCCceEEEeCCC-CCccEEEEecCC
Confidence 346667776655443311 1111 22333 357889987753 4678999998776544321111 111233332111
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~ 218 (373)
++||+.-.. ...+++++.....-+.+.... .......++- +|.|||.....
T Consensus 128 ---------g~ly~~d~~----------~~~I~~~~~dG~~~~~l~~~~--------l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 128 ---------DKLYWTDSG----------TSRIEVANLDGAHRKVLLWQS--------LEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp ---------TEEEEEETT----------TTEEEEEETTSCSCEEEECTT--------CSCEEEEEEETTTTEEEEEECSS
T ss_pred ---------CeEEEEcCC----------CCeEEEEcCCCCceEEEEeCC--------CCCcceEEEecCcCeEEEeccCC
Confidence 778887532 246888888665433332110 0011223443 68999995333
Q ss_pred ceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcC
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSG 296 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~ 296 (373)
...|.++|+....-+.+ ...... .-.+++.- +++||++.... ..+..++++. ..=..+.... .
T Consensus 181 ~~~I~r~~~dG~~~~~~-~~~~~~-~PnGla~d~~~~~lY~aD~~~-~~I~~~~~dG----~~~~~~~~~~--~------ 245 (349)
T 3v64_C 181 TPRIEASSMDGSGRRII-ADTHLF-WPNGLTIDYAGRRMYWVDAKH-HVIERANLDG----SHRKAVISQG--L------ 245 (349)
T ss_dssp SCEEEEEETTSCSCEES-CCSSCS-CEEEEEEETTTTEEEEEETTT-TEEEEEETTS----CSCEEEECSS--C------
T ss_pred CCEEEEEeCCCCCcEEE-EECCCC-CcceEEEeCCCCEEEEEECCC-CEEEEEeCCC----CceEEEEeCC--C------
Confidence 48899999986554444 221111 12244443 78999986432 2344444432 2112222111 1
Q ss_pred CCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 297 GKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+..++..++.||+.+.....|..+|..
T Consensus 246 ----~~P~giav~~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 246 ----PHPFAITVFEDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp ----SSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ----CCceEEEEECCEEEEecCCCCeEEEEEcc
Confidence 11566666889999999888889999965
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.42 Score=40.51 Aligned_cols=106 Identities=9% Similarity=0.064 Sum_probs=55.1
Q ss_pred ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 207 TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 207 ~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
-++. ++. +.....+..||+.+.+-... ..... ..-..+... +++ ++.+..+..+.+|++.. .+-.....
T Consensus 194 ~~~~-~~~-~~~dg~i~i~d~~~~~~~~~-~~~~~-~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~----~~~~~~~~ 263 (313)
T 3odt_A 194 DDGH-FIS-CSNDGLIKLVDMHTGDVLRT-YEGHE-SFVYCIKLLPNGD--IVSCGEDRTVRIWSKEN----GSLKQVIT 263 (313)
T ss_dssp ETTE-EEE-EETTSEEEEEETTTCCEEEE-EECCS-SCEEEEEECTTSC--EEEEETTSEEEEECTTT----CCEEEEEE
T ss_pred CCCe-EEE-ccCCCeEEEEECCchhhhhh-hhcCC-ceEEEEEEecCCC--EEEEecCCEEEEEECCC----CceeEEEe
Confidence 3566 334 34567899999987654332 11111 111223332 443 33344455589999865 43332222
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEE
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWV 338 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~ 338 (373)
.+.... .......++. ++.++..+.+.+||++ ++ ++.
T Consensus 264 ~~~~~i-----------~~~~~~~~~~-~~~~~~dg~i~iw~~~--~~--~~~ 300 (313)
T 3odt_A 264 LPAISI-----------WSVDCMSNGD-IIVGSSDNLVRIFSQE--KS--RWA 300 (313)
T ss_dssp CSSSCE-----------EEEEECTTSC-EEEEETTSCEEEEESC--GG--GCC
T ss_pred ccCceE-----------EEEEEccCCC-EEEEeCCCcEEEEeCC--CC--cee
Confidence 221110 1222333555 4557777889999999 87 543
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.30 E-value=0.34 Score=41.74 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVP 287 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p 287 (373)
+|.+.+.+ .....|..||+.+.+-... .. .......+....+..+++++. +..+.+|+++. . ..+..+.
T Consensus 226 ~~~~l~s~-s~Dg~i~iwd~~~~~~~~~-~~--~~~~v~~~~~~~~~~~~~~~~-d~~i~iwd~~~----~--~~~~~~~ 294 (340)
T 4aow_A 226 DGSLCASG-GKDGQAMLWDLNEGKHLYT-LD--GGDIINALCFSPNRYWLCAAT-GPSIKIWDLEG----K--IIVDELK 294 (340)
T ss_dssp TSSEEEEE-ETTCEEEEEETTTTEEEEE-EE--CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTT----T--EEEEEEC
T ss_pred CCCEEEEE-eCCCeEEEEEeccCceeee-ec--CCceEEeeecCCCCceeeccC-CCEEEEEECCC----C--eEEEecc
Confidence 45555554 4467788899887653322 11 111112233333444444443 34578998854 2 2333332
Q ss_pred hhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 288 IEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
..................+...++..++.++.++.|.+||++ ++
T Consensus 295 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~--tG 338 (340)
T 4aow_A 295 QEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT--IG 338 (340)
T ss_dssp CC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE--C-
T ss_pred ccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC--Cc
Confidence 211111000000000122233466677778888889999999 76
No 102
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.30 E-value=0.59 Score=42.02 Aligned_cols=218 Identities=8% Similarity=-0.022 Sum_probs=113.0
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE--eeCcEEEEeeCCCCceEEEEEcCcccc----eeccCCCCCCCCCCeEEE
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS--SIGSFLLLRPINSTILQLVLCNPFTRQ----FRYLPLLNVSRTNPAVGI 136 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~--~~~g~l~~~gg~~~~~~~~v~np~t~~----w~~lp~~~~~~~~~~~~~ 136 (373)
..+...|........+-.. ......++ ..++.||+.... ...++.+++.... ...+.. .....+...+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~--~~~~~p~gla 165 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLA 165 (400)
T ss_dssp TEEEEECTTSCSCEEEECS--CSCEEEEEEETTTTEEEEEETT--TTEEEEEEC------CCCEEEEC--SSCSCEEEEE
T ss_pred ceeEEEccCCcceeEeccc--cCcceEEeeeeccCceEEEecC--CCeEEEEEcccCCCCCcceEEEe--CCCCCcccEE
Confidence 4666677776665544211 11222333 347899998753 4678888886522 111111 1111222222
Q ss_pred EEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEE
Q 046684 137 VMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWI 214 (373)
Q Consensus 137 ~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~ 214 (373)
++ .. . ++||+.-... ..+++++.....-+.+..... . .....++- +|.|||.
T Consensus 166 vD-~~--~-----~~lY~~d~~~----------~~I~~~~~~g~~~~~l~~~~~-----~---~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 166 VD-WI--H-----SNIYWTDSVL----------GTVSVADTKGVKRKTLFRENG-----S---KPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp EE-TT--T-----TEEEEEETTT----------TEEEEECTTTCSEEEEEECSS-----C---CEEEEEEETTTTEEEEE
T ss_pred EE-ec--C-----CceEEEECCC----------CeEEEEeCCCCceEEEEeCCC-----C---CcceEEEecccCeEEEE
Confidence 32 11 1 7788875322 468888887665444322100 0 11122332 5899998
Q ss_pred EcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 215 TSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 215 gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
.......|..+++....-..+ ..... ..-.+++.- +++||++.... ..+...+++. ......+ ..+...
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~-~~~~l-~~P~glavd~~~~~lY~aD~~~-~~I~~~d~dG---~~~~~~~-~~~~~l-- 290 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSL-VTENI-QWPNGITLDLLSGRLYWVDSKL-HSISSIDVNG---GNRKTIL-EDEKRL-- 290 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEE-ECSSC-SCEEEEEEETTTTEEEEEETTT-TEEEEEETTS---CCCEEEE-ECSSTT--
T ss_pred eCCCCCEEEEEeCCCCccEEE-EECCC-CceEEEEEEeCCCEEEEEECCC-CEEEEEeCCC---CccEEEE-eCCCCC--
Confidence 533346899999876544333 11111 111244443 68999986422 2244444432 2233332 211111
Q ss_pred hhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 293 RLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+.+++..++.||+.+.....|..+|..
T Consensus 291 --------~~P~gl~v~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 291 --------AHPFSLAVFEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp --------SSEEEEEEETTEEEEEESSSCSEEEEESS
T ss_pred --------CCCEEEEEeCCEEEEecCCCCeEEEEEcC
Confidence 11567777899999999877889999965
No 103
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.29 E-value=0.61 Score=42.37 Aligned_cols=102 Identities=8% Similarity=-0.000 Sum_probs=57.2
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVP 287 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p 287 (373)
++...+.| ...+.|..||+.+++-... +..+......+..++..++.++ .+..+.+|++.. .. ......
T Consensus 321 ~~~~l~sg-~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~~~~l~s~s-~dg~v~vwd~~~----~~--~~~~~~ 389 (464)
T 3v7d_B 321 ERKRCISA-SMDTTIRIWDLENGELMYT---LQGHTALVGLLRLSDKFLVSAA-ADGSIRGWDAND----YS--RKFSYH 389 (464)
T ss_dssp TTTEEEEE-ETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEECSSEEEEEE-TTSEEEEEETTT----CC--EEEEEE
T ss_pred CCCEEEEE-eCCCcEEEEECCCCcEEEE---EeCCCCcEEEEEEcCCEEEEEe-CCCcEEEEECCC----Cc--eeeeec
Confidence 34444443 4567799999987754322 1222233344455666655554 344589999875 22 222221
Q ss_pred hhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 288 IEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.... ....+...++.+++.++ .+.+.+||.+ ++
T Consensus 390 ~~~~----------~~~~~~~~~~~~l~~~~-dg~i~iwd~~--~g 422 (464)
T 3v7d_B 390 HTNL----------SAITTFYVSDNILVSGS-ENQFNIYNLR--SG 422 (464)
T ss_dssp CTTC----------CCEEEEEECSSEEEEEE-TTEEEEEETT--TC
T ss_pred CCCC----------ccEEEEEeCCCEEEEec-CCeEEEEECC--CC
Confidence 1110 12444555666666665 5689999999 88
No 104
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.29 E-value=0.0012 Score=63.18 Aligned_cols=34 Identities=21% Similarity=0.511 Sum_probs=31.7
Q ss_pred CcchHHHHHHHHhcC-ChhhHHHhhcccccchhcc
Q 046684 3 SNLHLDVLANIFSFL-SPDSLARAKSVCSHWHTCA 36 (373)
Q Consensus 3 ~~Lp~dll~~Il~rL-P~~~l~r~r~Vck~W~~li 36 (373)
+.||+|++.+||++| |.+++.++..|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999998874
No 105
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.29 E-value=0.21 Score=45.13 Aligned_cols=176 Identities=11% Similarity=-0.015 Sum_probs=88.2
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-eeCc-EEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SIGS-FLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~g-~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
..++.+|..+.+...+... ......++ +.+| .|++.+..+....++++|..+++...+..... ........+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~--~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~sp 276 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS----NNTEPTWFP 276 (415)
T ss_dssp CEEEEEETTTCCEEEEECC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS----CEEEEEECT
T ss_pred cEEEEEECCCCcEEEeecC--CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC----cccceEECC
Confidence 5778888887766544322 11122222 3344 45545544445679999999988766544321 111122211
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCC-
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSAR- 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~- 218 (373)
.+ ..|+..+..+ ....++++|..++.-+.+..... .....++ -+|+..+++...
T Consensus 277 dg-------~~l~~~s~~~--------g~~~i~~~d~~~~~~~~l~~~~~---------~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 277 DS-------QNLAFTSDQA--------GRPQVYKVNINGGAPQRITWEGS---------QNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp TS-------SEEEEEECTT--------SSCEEEEEETTSSCCEECCCSSS---------EEEEEEECTTSSEEEEEEECS
T ss_pred CC-------CEEEEEECCC--------CCcEEEEEECCCCCEEEEecCCC---------cccCeEECCCCCEEEEEECcC
Confidence 11 3354444221 13478899998876444332210 0111122 245533333222
Q ss_pred -ceEEEEEECCCCcEEecccCCCCCCCceeEE-EECCEEEEEEeecCCceEEEEee
Q 046684 219 -AYSVIGFDIESNTWRELSAPMADRLEFATLV-SRNQKLTLIGGTCGGDACVWELS 272 (373)
Q Consensus 219 -~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~-~~~g~l~~~gg~~~~~~~i~~~~ 272 (373)
...|..+|+++++...+ .... ....+. .-+|+.+++++..+....+|..+
T Consensus 333 g~~~i~~~d~~~~~~~~l-~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQVL-SSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp SCEEEEEEETTTCCEEEC-CCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEEECCCCCEEEe-cCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 46899999999888766 2221 112222 23677666655554433444443
No 106
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.23 E-value=0.33 Score=42.29 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=55.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++.+. . +.....|..+|+.+++-... .. .+.... .+... ++.+++.++ .+..+.+|++.. .. .+..
T Consensus 154 ~~~l~-s-~s~d~~i~~wd~~~~~~~~~-~~--~h~~~v~~~~~~~~~~~l~sg~-~d~~v~~wd~~~----~~--~~~~ 221 (340)
T 1got_B 154 DNQIV-T-SSGDTTCALWDIETGQQTTT-FT--GHTGDVMSLSLAPDTRLFVSGA-CDASAKLWDVRE----GM--CRQT 221 (340)
T ss_dssp TTEEE-E-EETTSCEEEEETTTTEEEEE-EC--CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT----CS--EEEE
T ss_pred CCcEE-E-EECCCcEEEEECCCCcEEEE-Ec--CCCCceEEEEECCCCCEEEEEe-CCCcEEEEECCC----Ce--eEEE
Confidence 45533 3 23456788999988765433 11 111111 22222 566666654 444579999865 32 2222
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+..-. ......++..++..++.++..+.+.+||++ ++
T Consensus 222 ~~~h~---------~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~--~~ 258 (340)
T 1got_B 222 FTGHE---------SDINAICFFPNGNAFATGSDDATCRLFDLR--AD 258 (340)
T ss_dssp ECCCS---------SCEEEEEECTTSSEEEEEETTSCEEEEETT--TT
T ss_pred EcCCc---------CCEEEEEEcCCCCEEEEEcCCCcEEEEECC--CC
Confidence 22100 000122333466777788888889999998 76
No 107
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.20 E-value=1.1 Score=44.17 Aligned_cols=227 Identities=10% Similarity=-0.044 Sum_probs=115.3
Q ss_pred eEEEEeCCCCCccccCCC-CCCCCc-eeEEe-eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcC
Q 046684 64 CCYVHNPVSDKWHVLSLD-FLPYPV-RPVSS-IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~~-~~~~~~-~~~~~-~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
.+..||+.++.+.....+ ..+... .++.. .+|.|++... ..-++++|+.+++++.++..... .....++..+.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~ 459 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTY---LGNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDK 459 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEET---TEEEEEECSSSCEEEECCSTTTC-CCCEEEEEECT
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEec---cCCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECC
Confidence 355577665554443211 112111 22222 2677777543 35689999999998876532111 11222333321
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~ 218 (373)
+ ++|++... ..+.+||+.+++|+.....+.. ............ +|.+++.. .
T Consensus 460 ---~-----g~lwigt~------------~Gl~~~~~~~~~~~~~~~~~~~----~~~~~~i~~i~~d~~g~lWigt--~ 513 (781)
T 3v9f_A 460 ---N-----KKIWIGTH------------AGVFVIDLASKKVIHHYDTSNS----QLLENFVRSIAQDSEGRFWIGT--F 513 (781)
T ss_dssp ---T-----SEEEEEET------------TEEEEEESSSSSCCEEECTTTS----SCSCSCEEEEEECTTCCEEEEE--S
T ss_pred ---C-----CCEEEEEC------------CceEEEeCCCCeEEecccCccc----ccccceeEEEEEcCCCCEEEEE--c
Confidence 1 67777432 3589999999988776543210 000011111222 46666542 2
Q ss_pred ceEEEEEECCCCcEEecccCCCCCCCc-eeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcC
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRLEF-ATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSG 296 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~ 296 (373)
...+..||+.++++..+.......... ..+.. .+|.|++... ..+ ++.++. ++++++.... .... ..
T Consensus 514 ~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~---~Gl-v~~~d~--~~~~~~~~~~-~~gl----~~ 582 (781)
T 3v9f_A 514 GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG---EGL-VCFPSA--RNFDYQVFQR-KEGL----PN 582 (781)
T ss_dssp SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET---TEE-EEESCT--TTCCCEEECG-GGTC----SC
T ss_pred CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC---CCc-eEEECC--CCCcEEEccc-cCCC----CC
Confidence 356899999999998773211111111 22332 3677777653 222 244443 4466655432 1110 00
Q ss_pred CCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEe
Q 046684 297 GKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
. .....+...+|.|++... ..+..||++ ++ +++..
T Consensus 583 ~---~i~~i~~d~~g~lW~~t~--~Gl~~~~~~--~~--~~~~~ 617 (781)
T 3v9f_A 583 T---HIRAISEDKNGNIWASTN--TGISCYITS--KK--CFYTY 617 (781)
T ss_dssp C---CCCEEEECSSSCEEEECS--SCEEEEETT--TT--EEEEE
T ss_pred c---eEEEEEECCCCCEEEEcC--CceEEEECC--CC--ceEEe
Confidence 0 001233334688888653 369999999 88 76654
No 108
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.18 E-value=0.46 Score=39.71 Aligned_cols=189 Identities=10% Similarity=-0.040 Sum_probs=101.0
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
.++.||+.... ...+.++|+.++.-..+-. .....+...++. .. . +++|+.... ...+
T Consensus 46 ~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~--~~~~~p~~ia~d-~~--~-----~~lyv~d~~----------~~~I 103 (267)
T 1npe_A 46 VDKVVYWTDIS--EPSIGRASLHGGEPTTIIR--QDLGSPEGIALD-HL--G-----RTIFWTDSQ----------LDRI 103 (267)
T ss_dssp TTTEEEEEETT--TTEEEEEESSSCCCEEEEC--TTCCCEEEEEEE-TT--T-----TEEEEEETT----------TTEE
T ss_pred CCCEEEEEECC--CCEEEEEecCCCCcEEEEE--CCCCCccEEEEE-ec--C-----CeEEEEECC----------CCEE
Confidence 37889987753 4689999998765433211 111122222332 11 1 678887532 2468
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCC-ceEEEEEECCCCcEEecccCCCCCCCceeEE
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSAR-AYSVIGFDIESNTWRELSAPMADRLEFATLV 249 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~-~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~ 249 (373)
.+++.....-+.+.... ......+++- +|.+||..... ...|..+++....-+.+ ..... ..-.+++
T Consensus 104 ~~~~~~g~~~~~~~~~~--------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~-~~~~~-~~P~gia 173 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTG--------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL-AQDNL-GLPNGLT 173 (267)
T ss_dssp EEEETTSCSCEEEECSS--------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE-ECTTC-SCEEEEE
T ss_pred EEEEcCCCCEEEEEECC--------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE-EECCC-CCCcEEE
Confidence 88888654333322110 0011223333 58999985322 46889999876544433 11111 1122344
Q ss_pred EE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEE
Q 046684 250 SR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 250 ~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd 327 (373)
.- ++.||+..... ..+.+++++. .. ....++. . ..+..++..++.||+.....+.+.++|
T Consensus 174 ~d~~~~~lyv~d~~~-~~I~~~~~~g----~~--~~~~~~~--~---------~~P~gi~~d~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 174 FDAFSSQLCWVDAGT-HRAECLNPAQ----PG--RRKVLEG--L---------QYPFAVTSYGKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EETTTTEEEEEETTT-TEEEEEETTE----EE--EEEEEEC--C---------CSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEECCC-CEEEEEecCC----Cc--eEEEecC--C---------CCceEEEEeCCEEEEEECCCCeEEEEe
Confidence 43 56888886432 2344444432 21 1111111 0 114556667899999988778899999
Q ss_pred ccccCC
Q 046684 328 EDEDKR 333 (373)
Q Consensus 328 ~~~~~~ 333 (373)
++ ++
T Consensus 236 ~~--~g 239 (267)
T 1npe_A 236 LA--IS 239 (267)
T ss_dssp TT--TT
T ss_pred CC--CC
Confidence 99 76
No 109
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.17 E-value=0.65 Score=41.41 Aligned_cols=105 Identities=10% Similarity=-0.046 Sum_probs=56.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
+|.+.+.+ .....+..||+.+.+-... ...........+... ++. +++.++ .+..+.+|++.. ....-..+..
T Consensus 258 ~~~~l~~~-~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~g~-~dg~i~vwd~~~--~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAG-HVSGVITVHNVFSKEQTIQ-LPSKFTCSCNSLTVDGNNANYIYAGY-ENGMLAQWDLRS--PECPVGEFLI 332 (420)
T ss_dssp TTEEEEEE-ETTSCEEEEETTTCCEEEE-ECCTTSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTC--TTSCSEEEEE
T ss_pred CCCEEEEE-cCCCeEEEEECCCCceeEE-cccccCCCceeEEEeCCCCCEEEEEe-CCCeEEEEEcCC--CcCchhhhhc
Confidence 46555554 4566799999987754332 121111111222222 444 555554 445589999875 2221222221
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
-.... ...+...++.+++.++..+.+.+||+.
T Consensus 333 ~~~~~------------v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 333 NEGTP------------INNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp STTSC------------EEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred cCCCC------------ceEEEeCCCCEEEEecCCccEEEEecc
Confidence 11110 133344467788888888889999987
No 110
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.17 E-value=0.13 Score=45.13 Aligned_cols=157 Identities=10% Similarity=0.132 Sum_probs=82.9
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~ 228 (373)
+++++.|+.+ ..+.+||..++.|.....+..+ +. ..-..+++. +|.+.+.+ .....+..+|..
T Consensus 28 g~~las~~~D----------~~i~iw~~~~~~~~~~~~~~~~----h~-~~v~~~~~sp~g~~l~s~-s~D~~v~iw~~~ 91 (345)
T 3fm0_A 28 GTLLASCGGD----------RRIRIWGTEGDSWICKSVLSEG----HQ-RTVRKVAWSPCGNYLASA-SFDATTCIWKKN 91 (345)
T ss_dssp SSCEEEEETT----------SCEEEEEEETTEEEEEEEECSS----CS-SCEEEEEECTTSSEEEEE-ETTSCEEEEEEC
T ss_pred CCEEEEEcCC----------CeEEEEEcCCCcceeeeeeccc----cC-CcEEEEEECCCCCEEEEE-ECCCcEEEEEcc
Confidence 5566666654 3588888888877533221100 00 000111221 45555553 345667788888
Q ss_pred CCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE
Q 046684 229 SNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC 306 (373)
Q Consensus 229 ~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 306 (373)
++.+..+ ..+..+......+.. +|.+++.++. +..+.+|+++. ...+..+..+..-... ....+
T Consensus 92 ~~~~~~~-~~~~~h~~~v~~v~~sp~~~~l~s~s~-D~~v~iwd~~~---~~~~~~~~~~~~h~~~---------v~~~~ 157 (345)
T 3fm0_A 92 QDDFECV-TTLEGHENEVKSVAWAPSGNLLATCSR-DKSVWVWEVDE---EDEYECVSVLNSHTQD---------VKHVV 157 (345)
T ss_dssp CC-EEEE-EEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEEECT---TSCEEEEEEECCCCSC---------EEEEE
T ss_pred CCCeEEE-EEccCCCCCceEEEEeCCCCEEEEEEC-CCeEEEEECCC---CCCeEEEEEecCcCCC---------eEEEE
Confidence 7776554 233332222222222 5666665554 44579999975 2345544443321100 01222
Q ss_pred EecCCEEEEEEcCCccEEEEEccccCCcccEEEe
Q 046684 307 AAGNGAICLYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
...++.+++.++..+.+.+||.+ ++ +|..+
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~--~~--~~~~~ 187 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREE--ED--DWVCC 187 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEE--TT--EEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEEec--CC--CEEEE
Confidence 23356677777777789999999 88 77543
No 111
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.16 E-value=0.086 Score=51.34 Aligned_cols=218 Identities=6% Similarity=-0.058 Sum_probs=106.7
Q ss_pred eEEEEeCCCCCccccC-CCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcc----cceec-cC-CCCCCCCCCeEEE
Q 046684 64 CCYVHNPVSDKWHVLS-LDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFT----RQFRY-LP-LLNVSRTNPAVGI 136 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~-~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t----~~w~~-lp-~~~~~~~~~~~~~ 136 (373)
.+..++........+- ....+ ....+...++.||+.... ...++++++.+ ..-.. +. .+..+ .++++
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p-~gla~d~~~~~Ly~sD~~--~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glav 460 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNV-VALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAV 460 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTC-CCCEEETTTTEEEECCTT--TTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEEC
T ss_pred ceEEEeCCCCcceeeeccCcce-EEEccccccCeEEEEecC--CCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEE
Confidence 4445666555444331 11111 112233347889987653 45688888875 11111 11 11111 12222
Q ss_pred EEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE--ECCEEEEE
Q 046684 137 VMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC--TRGMLYWI 214 (373)
Q Consensus 137 ~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~--~~g~ly~~ 214 (373)
-... ++||+.-.. ...+.+++.....-+.+.... ......+++ .+|.|||.
T Consensus 461 D~~~---------g~LY~tD~~----------~~~I~v~d~dg~~~~~l~~~~--------~~~P~giavDp~~g~ly~t 513 (699)
T 1n7d_A 461 DWIH---------SNIYWTDSV----------LGTVSVADTKGVKRKTLFREQ--------GSKPRAIVVDPVHGFMYWT 513 (699)
T ss_dssp CCSS---------SBCEECCTT----------TSCEEEEBSSSCCEEEECCCS--------SCCCCCEECCSSSSCCEEC
T ss_pred EeeC---------CcEEEEecc----------CCeEEEEecCCCceEEEEeCC--------CCCcceEEEccCCCcEEEc
Confidence 1011 667775321 245788888765544332211 001122233 26889988
Q ss_pred EcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 215 TSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 215 gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
.......|.++++....-+.+ ...... .-.+++.- +++||++... ...+.+++++. ..-..+......
T Consensus 514 d~~~~~~I~~~~~dG~~~~~l-~~~~l~-~PnGlavd~~~~~LY~aD~~-~~~I~~~d~dG----~~~~~~~~~~~~--- 583 (699)
T 1n7d_A 514 DWGTPAKIKKGGLNGVDIYSL-VTENIQ-WPNGITLDLLSGRLYWVDSK-LHSISSIDVNG----GNRKTILEDEKR--- 583 (699)
T ss_dssp CCSSSCCEEBCCSSSCCCCEE-SCSSCS-SCCCEEECTTTCCEEEEETT-TTEEEEECSSS----SCCEEECCCSSS---
T ss_pred ccCCCCeEEEEeCCCCCeeEE-EeCCCC-CccEEEEeccCCEEEEEecC-CCeEEEEccCC----CceEEEEecCCc---
Confidence 422236788888875443333 111111 11234443 6889998643 22344444432 222222221110
Q ss_pred hhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 293 RLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...+..++..++.||+.....+.|..+|+. ++
T Consensus 584 -------~~~P~glavd~~~lywtd~~~~~V~~~d~~--~G 615 (699)
T 1n7d_A 584 -------LAHPFSLAVFEDKVFWTDIINEAIFSANRL--TG 615 (699)
T ss_dssp -------CSSCCCCEEETTEEEEECSTTTCEEEEETT--TE
T ss_pred -------CCCceEeEEECCEEEEEeCCCCeEEEEEcc--CC
Confidence 011456666788999999777889999998 66
No 112
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.15 E-value=0.77 Score=44.39 Aligned_cols=116 Identities=13% Similarity=0.188 Sum_probs=70.8
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCC--------CCCCeEEEEEcCCCCCCCCCceEEEEEeccC
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVS--------RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMS 159 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~ 159 (373)
-...+|.||+... ...++.+|+.|++ |+.-+..+.. ....+.++.+ ++||+.. .+
T Consensus 62 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~v~~-~d 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMS---WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG-----------DKVYVGT-LD 126 (668)
T ss_dssp CEEETTEEEEEEG---GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB-----------TEEEEEC-TT
T ss_pred CEEECCEEEEECC---CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC-----------CEEEEEc-CC
Confidence 3467999999876 4679999998876 7653322211 0112233333 7777743 22
Q ss_pred CCCCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECCEEEEEEcC----CceEEEEEECCCCc--
Q 046684 160 DEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA----RAYSVIGFDIESNT-- 231 (373)
Q Consensus 160 ~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~~i~~yd~~~~~-- 231 (373)
..+..+|.++++ |+.-..-+. .........++.+|.+|+-.+. ....+.+||+++++
T Consensus 127 ----------g~l~alD~~tG~~~W~~~~~~~~-----~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 127 ----------GRLIALDAKTGKAIWSQQTTDPA-----KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp ----------SEEEEEETTTCCEEEEEECSCTT-----SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ----------CEEEEEECCCCCEeeeeccCCCC-----CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 368999998876 886543211 1112223446778999876322 24789999998774
Q ss_pred EEec
Q 046684 232 WREL 235 (373)
Q Consensus 232 w~~~ 235 (373)
|+.-
T Consensus 192 W~~~ 195 (668)
T 1kv9_A 192 WRFY 195 (668)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7654
No 113
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.14 E-value=0.48 Score=39.56 Aligned_cols=152 Identities=11% Similarity=-0.049 Sum_probs=73.5
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
.+..|..........++++|+.+++...+...... ...... .+ +++.+++++ + ..+.
T Consensus 9 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---v~~~~~-sp--------dg~~l~~~~-~----------~~i~ 65 (297)
T 2ojh_A 9 HTRLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPEL---FEAPNW-SP--------DGKYLLLNS-E----------GLLY 65 (297)
T ss_dssp ---------CCCCEEEEEEETTTTEEEEEEEESSC---CEEEEE-CT--------TSSEEEEEE-T----------TEEE
T ss_pred eeeEeecCCCCcceeEEEEeCCCCceeeeccCCcc---eEeeEE-CC--------CCCEEEEEc-C----------CeEE
Confidence 34455544434467899999999887655432211 111122 11 144455443 2 3689
Q ss_pred EEECCC-CceeeecCCCccccccceeccCCceEE-ECCEEEEEEcC---CceEEEEEECCCCcEEecccCCCCCCCceeE
Q 046684 174 MYDSRH-DAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSA---RAYSVIGFDIESNTWRELSAPMADRLEFATL 248 (373)
Q Consensus 174 ~yd~~~-~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~---~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~ 248 (373)
++|..+ +....+...+ ........++ -+|+..+++.. ....|+.+|..+++...+ ..... ...+
T Consensus 66 ~~d~~~~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~ 134 (297)
T 2ojh_A 66 RLSLAGDPSPEKVDTGF-------ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM-TKNLP---SYWH 134 (297)
T ss_dssp EEESSSCCSCEECCCTT-------CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC-CSSSS---EEEE
T ss_pred EEeCCCCCCceEecccc-------ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe-ecCCC---ccce
Confidence 999988 7766554331 0011112222 24554444332 357899999887776555 22211 1222
Q ss_pred EE-ECCEEEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 249 VS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 249 ~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
.. -+|+.+++.+.....+.+|.++. .+....
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~--~~~~~~ 166 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDI--DSGVET 166 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEET--TTCCEE
T ss_pred EECCCCCEEEEEECCCCceEEEEEEC--CCCcce
Confidence 22 25554443333334478999876 444443
No 114
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.14 E-value=0.68 Score=41.30 Aligned_cols=104 Identities=12% Similarity=0.075 Sum_probs=53.6
Q ss_pred ceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCE-EEEEEcCCceEEEEEE
Q 046684 149 NFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGM-LYWITSARAYSVIGFD 226 (373)
Q Consensus 149 ~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~-ly~~gg~~~~~i~~yd 226 (373)
+++.++.|+.+ ..+.+||..++.-....... +. .....+++. +|. +.+. +.....|..||
T Consensus 258 ~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~------~~-~~v~~~~~~~~~~~~l~~-g~~dg~i~vwd 319 (420)
T 3vl1_A 258 YGKYVIAGHVS----------GVITVHNVFSKEQTIQLPSK------FT-CSCNSLTVDGNNANYIYA-GYENGMLAQWD 319 (420)
T ss_dssp TTEEEEEEETT----------SCEEEEETTTCCEEEEECCT------TS-SCEEEEEECSSCTTEEEE-EETTSEEEEEE
T ss_pred CCCEEEEEcCC----------CeEEEEECCCCceeEEcccc------cC-CCceeEEEeCCCCCEEEE-EeCCCeEEEEE
Confidence 36677777554 35899998876522111110 00 001111222 344 4444 34567899999
Q ss_pred CCCCcE--EecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 227 IESNTW--RELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 227 ~~~~~w--~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+.+.+- ..+ .......-..+...++++++.++ .+..+.+|++..
T Consensus 320 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~l~s~~-~d~~v~iw~~~~ 365 (420)
T 3vl1_A 320 LRSPECPVGEF--LINEGTPINNVYFAAGALFVSSG-FDTSIKLDIISD 365 (420)
T ss_dssp TTCTTSCSEEE--EESTTSCEEEEEEETTEEEEEET-TTEEEEEEEECC
T ss_pred cCCCcCchhhh--hccCCCCceEEEeCCCCEEEEec-CCccEEEEeccC
Confidence 987542 222 11111222234445777666654 334589999875
No 115
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.12 E-value=1 Score=43.17 Aligned_cols=198 Identities=14% Similarity=-0.074 Sum_probs=102.7
Q ss_pred eeEEEEeCCC------CCccccC-CCCCCCCceeEEeeCc-EEEEeeCCC-----CceEEEEEcCc-cc---ceeccCCC
Q 046684 63 LCCYVHNPVS------DKWHVLS-LDFLPYPVRPVSSIGS-FLLLRPINS-----TILQLVLCNPF-TR---QFRYLPLL 125 (373)
Q Consensus 63 ~~~~~~d~~~------~~w~~~~-~~~~~~~~~~~~~~~g-~l~~~gg~~-----~~~~~~v~np~-t~---~w~~lp~~ 125 (373)
..++.+|..+ .....+. .... ......-+-+| .|++..... ....++++|.. ++ +.+.+..-
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5778888877 4444443 2111 11111234455 454444221 23689999998 56 44443221
Q ss_pred CCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceE
Q 046684 126 NVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESV 205 (373)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~ 205 (373)
. ... ....... +|+++|+.+..+ + ...++++|..+++++.+.........|.........+
T Consensus 240 ~--~~~-~~~~~~s--------pdg~l~~~~~~~-----~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 240 P--EEA-IAQAEWA--------PDGSLIVATDRT-----G---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp T--TBC-EEEEEEC--------TTSCEEEEECTT-----S---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEE
T ss_pred C--Cce-EcceEEC--------CCCeEEEEECCC-----C---CeEEEEEECCCCceeecccccccccCccccccCceEe
Confidence 1 111 1111111 126677666432 1 3478999998888887765432111110001112334
Q ss_pred EE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEeecCCCCCCeEEE
Q 046684 206 CT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 206 ~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v 283 (373)
+. +|.+++.+......++.+|+.+++.+.+. .+... ...+ ..-++.++++.........+|..+. ++.+.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~--~~g~~~~l 375 (662)
T 3azo_A 301 PLANGLIAVVHGKGAAVLGILDPESGELVDAA--GPWTE-WAATLTVSGTRAVGVAASPRTAYEVVELDT--VTGRARTI 375 (662)
T ss_dssp ECTTSCEEEEEBSSSCEEEEEETTTTEEEECC--SSCCE-EEEEEEEETTEEEEEEEETTEEEEEEEEET--TTCCEEEE
T ss_pred EeCCCEEEEEEEcCccEEEEEECCCCcEEEec--CCCCe-EEEEEecCCCEEEEEEcCCCCCCEEEEEEC--CCCceEEe
Confidence 43 67777775444557888899888877662 22111 1122 3346677777665554467888775 55677766
Q ss_pred Ee
Q 046684 284 EK 285 (373)
Q Consensus 284 ~~ 285 (373)
..
T Consensus 376 ~~ 377 (662)
T 3azo_A 376 GA 377 (662)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 116
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.10 E-value=0.59 Score=40.21 Aligned_cols=111 Identities=12% Similarity=0.226 Sum_probs=57.7
Q ss_pred cCCceEEEEEECCC-CcEEecccCCCCCCCceeEEEE--CC----EEEEEEeecCCceEEEEeecCCCCCCeEE--EEee
Q 046684 216 SARAYSVIGFDIES-NTWRELSAPMADRLEFATLVSR--NQ----KLTLIGGTCGGDACVWELSEGGDDDIWCL--IEKV 286 (373)
Q Consensus 216 g~~~~~i~~yd~~~-~~w~~~~~~~p~~~~~~~~~~~--~g----~l~~~gg~~~~~~~i~~~~~~~~~~~W~~--v~~~ 286 (373)
+.....|..+|..+ ++|..+ ..+..+......+.. ++ .+++.+ ..+..+.+|+++.. ....|.. +...
T Consensus 185 gs~D~~v~lWd~~~~~~~~~~-~~l~~h~~~V~~v~~sp~~~~~~~~las~-s~D~~v~iw~~~~~-~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 185 GGCDNLIKLWKEEEDGQWKEE-QKLEAHSDWVRDVAWAPSIGLPTSTIASC-SQDGRVFIWTCDDA-SSNTWSPKLLHKF 261 (316)
T ss_dssp CBTTSBCCEEEECTTSCEEEE-ECCBCCSSCEEEEECCCCSSCSCCEEEEE-ETTCEEEEEECSST-TCCCCBCCEEEEC
T ss_pred ecCCCeEEEEEeCCCCcccee-eecccCCCceEEEEecCCCCCCCceEEEE-cCCCeEEEEEccCc-cccchhhhhhhcC
Confidence 44556677888764 456655 344333322222222 22 444444 44556899998651 1233421 2111
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEecccc
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
.... .......++.+++.++.++.+.+|+... .+ .|..+....
T Consensus 262 ~~~v------------~~v~~sp~g~~las~~~D~~v~lw~~~~-~g--~~~~~~~~~ 304 (316)
T 3bg1_A 262 NDVV------------WHVSWSITANILAVSGGDNKVTLWKESV-DG--QWVCISDVN 304 (316)
T ss_dssp SSCE------------EEEEECTTTCCEEEEESSSCEEEEEECT-TS--CEEEEEECC
T ss_pred CCcE------------EEEEEcCCCCEEEEEcCCCeEEEEEECC-CC--cEEEeeecc
Confidence 1111 1222234566777777777899999752 46 788775543
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.09 E-value=0.44 Score=41.09 Aligned_cols=106 Identities=8% Similarity=-0.059 Sum_probs=51.7
Q ss_pred CCceEEEEEECCC-Cc--EEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCC------CCCeEEEEe
Q 046684 217 ARAYSVIGFDIES-NT--WRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGD------DDIWCLIEK 285 (373)
Q Consensus 217 ~~~~~i~~yd~~~-~~--w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~------~~~W~~v~~ 285 (373)
.....+..||+.+ .. .... ..+....-..+... ++.++++++ .+..+.+|+++. . ..... +..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~--~~~~~~~~~~~~-~~~ 240 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIE--ESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDD--QGDDYNSSKRFA-FRC 240 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEE--ECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCT--TCCSTTCTTCEE-EEC
T ss_pred eCCCeEEEEECCccccccceee--ecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcC--CCccccccccee-eec
Confidence 4567899999987 33 2222 11111112233333 466666655 445589999976 3 11222 111
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....... ..........+...++.+++.++..+.+.+||.+ ++
T Consensus 241 ~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~ 283 (342)
T 1yfq_A 241 HRLNLKD---TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ--TR 283 (342)
T ss_dssp CCCCTTC---CSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT--TT
T ss_pred ccccccc---cccceeEEEEEEcCCCCEEEEecCCceEEEEcCc--cH
Confidence 1100000 0000000122223356666777777789999999 77
No 118
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.09 E-value=0.57 Score=40.39 Aligned_cols=200 Identities=13% Similarity=0.061 Sum_probs=101.2
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
..+|.+|+.+.. ...++++|+.+++.+.+..... ... ..+..++ ++++|+..... ......
T Consensus 53 ~~~g~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~--~~~-~~i~~~~--------dg~l~v~~~~~------~~~~~~ 113 (333)
T 2dg1_A 53 DRQGQLFLLDVF--EGNIFKINPETKEIKRPFVSHK--ANP-AAIKIHK--------DGRLFVCYLGD------FKSTGG 113 (333)
T ss_dssp CTTSCEEEEETT--TCEEEEECTTTCCEEEEEECSS--SSE-EEEEECT--------TSCEEEEECTT------SSSCCE
T ss_pred CCCCCEEEEECC--CCEEEEEeCCCCcEEEEeeCCC--CCc-ceEEECC--------CCcEEEEeCCC------CCCCce
Confidence 346778876643 4579999999988766431111 111 2222221 16677765221 111246
Q ss_pred EEEEECCCCceeee-cCCCccccccceeccCCceEEE--CCEEEEEEcC-----CceEEEEEECCCCcEEecccCCCCCC
Q 046684 172 VEMYDSRHDAWQII-GSMPVEFAVRLTVWTPNESVCT--RGMLYWITSA-----RAYSVIGFDIESNTWRELSAPMADRL 243 (373)
Q Consensus 172 ~~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~-----~~~~i~~yd~~~~~w~~~~~~~p~~~ 243 (373)
+.+||..++.-+.+ ..... . .....+.+ +|.+|+.... ....++.+|+++++...+ ... . .
T Consensus 114 i~~~d~~~~~~~~~~~~~~~-------~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~-~-~ 182 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLST-------A-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI-IQN-I-S 182 (333)
T ss_dssp EEEECTTSCSCEEEECSSSS-------C-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE-EEE-E-S
T ss_pred EEEEeCCCCEEEEEEccCcc-------C-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe-ecC-C-C
Confidence 89999988775532 21110 0 01111222 5788876421 146899999988777655 111 0 1
Q ss_pred CceeEEE-ECCE-EEEEEeecCCceEEEEeecCCCCCCeEEEE-eechhhhhhhcCCCCCCCce-EEEecCCEEEEEEcC
Q 046684 244 EFATLVS-RNQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIE-KVPIEMGMRLSGGKASWGGT-RCAAGNGAICLYREV 319 (373)
Q Consensus 244 ~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 319 (373)
....++. -+|+ ||+... ....+.+|+++. +......+. ...... . +. ..+. .++..++.||+....
T Consensus 183 ~~~~i~~~~dg~~l~v~~~-~~~~i~~~d~~~--~g~~~~~~~~~~~~~~-~---~~---~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTET-TANRLHRIALED--DGVTIQPFGATIPYYF-T---GH---EGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp SEEEEEECTTSSEEEEEEG-GGTEEEEEEECT--TSSSEEEEEEEEEEEC-C---SS---SEEEEEEEBTTCCEEEEEET
T ss_pred cccceEECCCCCEEEEEeC-CCCeEEEEEecC--CCcCcccccceEEEec-C---CC---CCCCceEECCCCCEEEEEcC
Confidence 1122332 2454 776643 233467777753 223333221 111000 0 00 0012 333346788887766
Q ss_pred CccEEEEEccccCC
Q 046684 320 GLGMIIWREDEDKR 333 (373)
Q Consensus 320 ~~~~~~yd~~~~~~ 333 (373)
.+.+.+||++ .+
T Consensus 253 ~~~v~~~d~~--g~ 264 (333)
T 2dg1_A 253 QGRVLVFNKR--GY 264 (333)
T ss_dssp TTEEEEECTT--SC
T ss_pred CCEEEEECCC--CC
Confidence 6679999997 65
No 119
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.06 E-value=0.015 Score=51.94 Aligned_cols=186 Identities=9% Similarity=-0.005 Sum_probs=81.7
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT 167 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~ 167 (373)
.+..++.||+.+. ...++.+|+.|++ |+.-. .... ....+.+ +++|+.+..+
T Consensus 5 P~v~~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~-----------g~~~v~~s~d-------- 58 (369)
T 2hz6_A 5 VTLPETLLFVSTL---DGSLHAVSKRTGSIKWTLKE--DPVL--QVPTHVE-----------EPAFLPDPND-------- 58 (369)
T ss_dssp ---CTTEEEEEET---TSEEEEEETTTCCEEEEEEC--CCSC--CCC----------------CCEEECTTT--------
T ss_pred CeeeCCEEEEEcC---CCEEEEEECCCCCEEEEecC--CCce--ecceEcC-----------CCEEEEeCCC--------
Confidence 3456888988776 4689999999886 54322 1111 1111222 6677765433
Q ss_pred ccceEEEEECCCC--ceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEECCCCc--EEecccCCCCC
Q 046684 168 YESMVEMYDSRHD--AWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDIESNT--WRELSAPMADR 242 (373)
Q Consensus 168 ~~~~~~~yd~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~~~~~--w~~~~~~~p~~ 242 (373)
..++.+|.+++ .|+.-...+. .. ....+. .++.+|+- .....+.++|+++++ |+.- ... .
T Consensus 59 --g~l~a~d~~tG~~~w~~~~~~~~-------~~-~~sp~~~~~~~v~~g--~~dg~v~a~D~~tG~~~w~~~-~~~--~ 123 (369)
T 2hz6_A 59 --GSLYTLGSKNNEGLTKLPFTIPE-------LV-QASPCRSSDGILYMG--KKQDIWYVIDLLTGEKQQTLS-SAF--A 123 (369)
T ss_dssp --CCEEEC-----CCSEECSCCHHH-------HH-TTCSCC-----CCCC--EEEEEEEEECCC----------------
T ss_pred --CEEEEEECCCCceeeeeeccCcc-------cc-ccCceEecCCEEEEE--eCCCEEEEEECCCCcEEEEec-CCC--c
Confidence 35888888665 4654322211 01 111122 46666653 235679999998764 5533 111 0
Q ss_pred CCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe---cCCEEEEEEcC
Q 046684 243 LEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA---GNGAICLYREV 319 (373)
Q Consensus 243 ~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~ 319 (373)
...+-.++.||+... + ..+..|+.+. .+..|+.-..-. . ...+.. .++.+|+ +..
T Consensus 124 ---~~~~p~~~~v~~~~~-d-g~v~a~d~~t--G~~~W~~~~~~~----~----------~~~~~~~~~~~~~v~~-~~~ 181 (369)
T 2hz6_A 124 ---DSLSPSTSLLYLGRT-E-YTITMYDTKT--RELRWNATYFDY----A----------ASLPEDDVDYKMSHFV-SNG 181 (369)
T ss_dssp ------------EEEEEE-E-EEEECCCSSS--SSCCCEEEEEEE----C----------CBCCCCCTTCCCCEEE-EET
T ss_pred ---ccccccCCEEEEEec-C-CEEEEEECCC--CCEEEeEecccc----c----------CccccCCccccceEEE-ECC
Confidence 011113455555432 2 2255666655 445687642210 0 011111 2356665 444
Q ss_pred CccEEEEEccccCCcccEEEe
Q 046684 320 GLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 320 ~~~~~~yd~~~~~~~~~W~~~ 340 (373)
.+.+.++|.+ +++..|+.-
T Consensus 182 dg~v~a~d~~--tG~~~W~~~ 200 (369)
T 2hz6_A 182 DGLVVTVDSE--SGDVLWIQN 200 (369)
T ss_dssp SCEEEEECTT--TCCEEEEEE
T ss_pred CCEEEEEECC--CCcEEEEec
Confidence 5679999998 887678754
No 120
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.05 E-value=0.99 Score=42.71 Aligned_cols=117 Identities=13% Similarity=0.148 Sum_probs=69.1
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcC-cccc--eeccCCCCCC--------CCCCeEEEEEcCCCCCCCCCceEEEEEecc
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNP-FTRQ--FRYLPLLNVS--------RTNPAVGIVMEGPAQHGPFPNFRIYVAGGM 158 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np-~t~~--w~~lp~~~~~--------~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~ 158 (373)
-...+|.||+.... ...++.+|+ .|++ |+.-...... ....+.++.+ ++||+....
T Consensus 58 P~v~~g~vyv~~~~--~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~v~~~d 124 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF--PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGA-----------GQIVKKQAN 124 (571)
T ss_dssp CEEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEET-----------TEEEEECTT
T ss_pred cEEECCEEEEEeCC--CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEEC-----------CEEEEEeCC
Confidence 34579999997752 256899999 8876 7653322110 0111233332 788875422
Q ss_pred CCCCCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECCEEEEEEcC----CceEEEEEECCCC--
Q 046684 159 SDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA----RAYSVIGFDIESN-- 230 (373)
Q Consensus 159 ~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~~i~~yd~~~~-- 230 (373)
..+..+|.++++ |+.-..-+. .......+.++.+|.+|+.... ....+.+||++++
T Consensus 125 -----------g~l~alD~~tG~~~W~~~~~~~~-----~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 125 -----------GHLLALDAKTGKINWEVEVCDPK-----VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp -----------SEEEEEETTTCCEEEEEECCCGG-----GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred -----------CEEEEEECCCCCEEEEecCCCCC-----ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 368999998875 875432210 0011223446679999876421 1578999999876
Q ss_pred cEEec
Q 046684 231 TWREL 235 (373)
Q Consensus 231 ~w~~~ 235 (373)
.|+.-
T Consensus 189 ~W~~~ 193 (571)
T 2ad6_A 189 KWRAF 193 (571)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 47654
No 121
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.05 E-value=0.83 Score=43.47 Aligned_cols=121 Identities=10% Similarity=0.054 Sum_probs=67.8
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcC-cccc--eeccCCCCCC--------CCCCeEEE--EEcCCCCCCCCCceEEEEEe
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNP-FTRQ--FRYLPLLNVS--------RTNPAVGI--VMEGPAQHGPFPNFRIYVAG 156 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np-~t~~--w~~lp~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~kl~~~g 156 (373)
-...+|.||+.... ...++.+|. .|++ |+.-+..... ......++ .+ + ... .+||+..
T Consensus 58 P~v~~g~vyv~~~~--~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~-g-~~~-----~rV~v~t 128 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF--PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD-G-KTP-----ALILKTQ 128 (599)
T ss_dssp CEEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC-S-SSC-----CEEEEEC
T ss_pred cEEECCEEEEEeCC--CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC-C-cce-----eEEEEEc
Confidence 44569999997752 256899999 8876 7653332210 01112222 12 0 000 2377643
Q ss_pred ccCCCCCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECCEEEEEEcC----CceEEEEEECCCC
Q 046684 157 GMSDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA----RAYSVIGFDIESN 230 (373)
Q Consensus 157 g~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----~~~~i~~yd~~~~ 230 (373)
. + ..+..+|.++++ |+.-..-+. .......+.++.+|.+|+-.+. ....|.+||.+++
T Consensus 129 ~-d----------g~l~AlDa~TG~~~W~~~~~~~~-----~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG 192 (599)
T 1w6s_A 129 L-D----------GNVAALNAETGETVWKVENSDIK-----VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTG 192 (599)
T ss_dssp T-T----------SEEEEEETTTCCEEEEEECCCGG-----GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTC
T ss_pred C-C----------CEEEEEECCCCCEEEeecCCCCC-----ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCC
Confidence 2 1 368899988876 875432210 0011223446689998875321 2578999999976
Q ss_pred c--EEec
Q 046684 231 T--WREL 235 (373)
Q Consensus 231 ~--w~~~ 235 (373)
+ |+.-
T Consensus 193 ~~~W~~~ 199 (599)
T 1w6s_A 193 EQVWRAY 199 (599)
T ss_dssp CEEEEEE
T ss_pred cEEEEEc
Confidence 4 7654
No 122
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.00 E-value=0.32 Score=46.77 Aligned_cols=145 Identities=7% Similarity=-0.037 Sum_probs=76.9
Q ss_pred cceEEEEECC-CCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCC-ceEEEEEECCCCcEEecccCCCCCCC-
Q 046684 169 ESMVEMYDSR-HDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSAR-AYSVIGFDIESNTWRELSAPMADRLE- 244 (373)
Q Consensus 169 ~~~~~~yd~~-~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~-~~~i~~yd~~~~~w~~~~~~~p~~~~- 244 (373)
...++++|.. ++++.....+... . .......++ -+|++|+.+... ...|+.+|++++++..+ .+......
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~----~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~~~~~ 289 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGG----P-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL-CRREEEFAG 289 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEE----T-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES-SCCSSBSSC
T ss_pred CcEEEEEEECCCCcccccEEeCCC----C-CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec-ccccccccC
Confidence 3579999998 5633332222100 0 001111222 268888775322 23799999988888877 44322110
Q ss_pred ------ceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE-EecCCEEEEE
Q 046684 245 ------FATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC-AAGNGAICLY 316 (373)
Q Consensus 245 ------~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 316 (373)
...++.. ++++++.... ....+|.++. ++...+. +...... ...+ ...++.+++.
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~--~~~~~~~---l~~~~~~----------~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDP--ESGELVD---AAGPWTE----------WAATLTVSGTRAVGV 352 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEET--TTTEEEE---CCSSCCE----------EEEEEEEETTEEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc--CccEEEEEEC--CCCcEEE---ecCCCCe----------EEEEEecCCCEEEEE
Confidence 1233333 6777777654 4468998775 4444333 3221100 1222 3456777666
Q ss_pred EcCC---ccEEEEEccccCCcccEEEe
Q 046684 317 REVG---LGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 317 ~~~~---~~~~~yd~~~~~~~~~W~~~ 340 (373)
.... ..++.+|++ ++ +.+.+
T Consensus 353 ~~~~~~~~~i~~~d~~--~g--~~~~l 375 (662)
T 3azo_A 353 AASPRTAYEVVELDTV--TG--RARTI 375 (662)
T ss_dssp EEETTEEEEEEEEETT--TC--CEEEE
T ss_pred EcCCCCCCEEEEEECC--CC--ceEEe
Confidence 5332 368888988 87 66655
No 123
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.99 E-value=1.1 Score=44.09 Aligned_cols=228 Identities=11% Similarity=0.067 Sum_probs=114.8
Q ss_pred eEEEEeCCCCCccccCCCCCC---CCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCC-CCCCCCCCeEEEEEc
Q 046684 64 CCYVHNPVSDKWHVLSLDFLP---YPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPL-LNVSRTNPAVGIVME 139 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~~~~~---~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~-~~~~~~~~~~~~~~~ 139 (373)
.+..||+.+++...+...... .-.......+|.|++... ..+++||+.++++..++. .+.... ........
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~----~gl~~~~~~~~~~~~~~~~~~~~~~-i~~i~~d~ 182 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP----EGLIMFDIKESKFIDDSFSTAMHKT-IASTLYRQ 182 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET----TEEEEEETTTTEEECSSSCHHHHTC-CEEEEEEE
T ss_pred chheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC----CceEEEECCCCEEEeccCCCCCCcc-eEEEEECC
Confidence 455677777666544221110 011123345788887654 468999999988876543 111110 11222221
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCC
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSAR 218 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~ 218 (373)
. +++++.. .. ..+..||..+++++.....+. ......... -+|.+++.. .
T Consensus 183 ~---------g~lwigt-~~----------~Gl~~~~~~~~~~~~~~~~~~-------~~~i~~i~~d~~g~lwigt--~ 233 (795)
T 4a2l_A 183 G---------DQIYIGT-ST----------DGLYTYSITQKTFEKVIPILG-------TKQIQAILQQSPTRIWVAT--E 233 (795)
T ss_dssp T---------TEEEEEE-SS----------SCEEEEETTTCCEEECC-----------CCCEEEEEEEETTEEEEEE--B
T ss_pred C---------CCEEEEE-CC----------CCEEEEeCCCCeEEEecCCCC-------CCeeEEEEEcCCCCEEEEE--C
Confidence 1 6787732 21 247899999988876643210 000111121 356666542 2
Q ss_pred ceEEEEEECCCCcEEecccCC--CCCC--C-ceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhh
Q 046684 219 AYSVIGFDIESNTWRELSAPM--ADRL--E-FATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGM 292 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~--p~~~--~-~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~ 292 (373)
...+..||+.++++....... +... . -..+..- +|.|++.. . . .+.+|+.+. ..+......+....
T Consensus 234 ~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~-~-Gl~~~~~~~----~~~~~~~~~~~~~~- 305 (795)
T 4a2l_A 234 GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F-N-DLNIYHEGT----DSFASYSSNPVENG- 305 (795)
T ss_dssp SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S-S-CEEEEETTT----TEEEEECCCTTSTT-
T ss_pred CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C-C-hhheEcCCC----CeEEEEecCCCCCC-
Confidence 346999999999888762221 1111 1 1223332 66777654 2 2 456666543 77766543321110
Q ss_pred hhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEec
Q 046684 293 RLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
.+... .....+...++.|++ |...+.+..||+. ++ .++...
T Consensus 306 ~l~~~---~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~--~~--~~~~~~ 346 (795)
T 4a2l_A 306 SLSQR---SVRSIFMDSQGGMWL-GTYFGGLNYYHPI--RN--RFKNIR 346 (795)
T ss_dssp SCSSS---CEEEEEECTTSCEEE-EESSSCEEEECGG--GG--SSEEEC
T ss_pred CCCCC---cEEEEEEeCCcCEEE-EECCCCeEEeCCC--cc--cceEEc
Confidence 00000 001222334677777 4344578999988 77 666554
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.44 Score=41.51 Aligned_cols=205 Identities=11% Similarity=0.039 Sum_probs=97.4
Q ss_pred eeEEeeCcEEEEeeCCCCceEEEEEcCccccee-ccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC
Q 046684 88 RPVSSIGSFLLLRPINSTILQLVLCNPFTRQFR-YLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA 166 (373)
Q Consensus 88 ~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~-~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~ 166 (373)
...++.++.+.+... ...+.+||..+++.. .... .. ......+...+.. + ++.++.|+.+
T Consensus 88 ~~s~s~D~~i~~w~~---~~~~~~~~~~~~~~~~~~~~-~~--~~~v~~~~~~~~~-~-----~~~l~s~s~d------- 148 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP---GNQITILDSKTNKVLREIEV-DS--ANEIIYMYGHNEV-N-----TEYFIWADNR------- 148 (343)
T ss_dssp EEEECSTTEEEEEET---TTEEEEEETTTCCEEEEEEC-CC--SSCEEEEECCC---------CCEEEEEETT-------
T ss_pred eEEecCCCeEEEEEc---cCceEEeecCCcceeEEeec-CC--CCCEEEEEcCCCC-C-----CCEEEEEeCC-------
Confidence 344555677776655 356677787776622 2111 11 1111222211100 1 5566666654
Q ss_pred cccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEE--ecccCCCCCC
Q 046684 167 TYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWR--ELSAPMADRL 243 (373)
Q Consensus 167 ~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~--~~~~~~p~~~ 243 (373)
..+.+||.++++-....... .......+++. +|.+.+. |.....|..||+.+++-. .+ ... +.
T Consensus 149 ---g~i~~wd~~~~~~~~~~~~~-------~~~~i~~~~~~pdg~~las-g~~dg~i~iwd~~~~~~~~~~~--~~~-h~ 214 (343)
T 3lrv_A 149 ---GTIGFQSYEDDSQYIVHSAK-------SDVEYSSGVLHKDSLLLAL-YSPDGILDVYNLSSPDQASSRF--PVD-EE 214 (343)
T ss_dssp ---CCEEEEESSSSCEEEEECCC-------SSCCCCEEEECTTSCEEEE-ECTTSCEEEEESSCTTSCCEEC--CCC-TT
T ss_pred ---CcEEEEECCCCcEEEEEecC-------CCCceEEEEECCCCCEEEE-EcCCCEEEEEECCCCCCCccEE--ecc-CC
Confidence 46889999877653322211 01011222332 4666666 456778999999887543 22 111 11
Q ss_pred CceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-C
Q 046684 244 EFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-G 320 (373)
Q Consensus 244 ~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 320 (373)
.....+.. +|..++.++ ++ .+.+|++.. ..... .+..+....... .....+...++..++.++. .
T Consensus 215 ~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~--~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 215 AKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRK--DVGTL-AYPTYTIPEFKT-------GTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp SCEEEEEECTTSSEEEEEE-SS-BEEEEETTS--STTCB-SSCCCBC------------CCEEEEECTTSSEEEEEETTT
T ss_pred CCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCC--CCcce-eecccccccccc-------cceEEEECCCCCEEEEecCCC
Confidence 22222222 566666655 44 789999975 11111 011110000000 0001333335555555444 6
Q ss_pred ccEEEEEccccCCcccEEE
Q 046684 321 LGMIIWREDEDKRKWEWVW 339 (373)
Q Consensus 321 ~~~~~yd~~~~~~~~~W~~ 339 (373)
+.+.+|+.+...+ .|..
T Consensus 283 ~~i~v~~~~~~~~--~~~~ 299 (343)
T 3lrv_A 283 NSLTIYKFDKKTK--NWTK 299 (343)
T ss_dssp TEEEEEEECTTTC--SEEE
T ss_pred CcEEEEEEccccc--ceEe
Confidence 6788888862255 7886
No 125
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.96 E-value=0.038 Score=48.93 Aligned_cols=236 Identities=10% Similarity=-0.035 Sum_probs=95.6
Q ss_pred eEEEEeCCCCCccccCCCC-CCCCceeEE-eeCcEEEEeeCCCCceEEEEEcCcccc-eeccCCCCCCCCCCeEEEEEcC
Q 046684 64 CCYVHNPVSDKWHVLSLDF-LPYPVRPVS-SIGSFLLLRPINSTILQLVLCNPFTRQ-FRYLPLLNVSRTNPAVGIVMEG 140 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~~~-~~~~~~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~-w~~lp~~~~~~~~~~~~~~~~~ 140 (373)
.+..||..++.|..+.... ....-.+++ +.+|..++.++. ...+.+||..+++ +..+..+..... .+..+...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~~~~~~~--~v~~~~~~ 109 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQTLVLLRLNR--AATFVRWS 109 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET--TSSEEEC------CCCCEEECCCCSS--CEEEEECC
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceeeeeEecccCC--ceEEEEEC
Confidence 4455777766554442222 122222233 234444444432 4679999999887 443322222111 12222211
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc-eeeecCCCccccccceeccCCceEEE-CCEEEEEEcCC
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-WQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSAR 218 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~ 218 (373)
++++.++.|+.+ ..+.+||..+++ |.....+..+ ....-..+++. ++.+.+.+ ..
T Consensus 110 -------~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~~~-~~ 166 (377)
T 3dwl_C 110 -------PNEDKFAVGSGA----------RVISVCYFEQENDWWVSKHLKRP-----LRSTILSLDWHPNNVLLAAG-CA 166 (377)
T ss_dssp -------TTSSCCEEEESS----------SCEEECCC-----CCCCEEECSS-----CCSCEEEEEECTTSSEEEEE-ES
T ss_pred -------CCCCEEEEEecC----------CeEEEEEECCcccceeeeEeecc-----cCCCeEEEEEcCCCCEEEEE-eC
Confidence 114455556543 357888887654 4333222100 00011111222 45555554 34
Q ss_pred ceEEEEEECCCCcEEecc---------------cCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 219 AYSVIGFDIESNTWRELS---------------APMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~---------------~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
...+..||+.+.+....+ ..+ ........+.. +|++++.++ .+..+.+|++.. ......
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~--~~~~~~ 242 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPSA--PEQPPR 242 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEECS--TTSCEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEe-CCCcEEEEECCC--CCCcce
Confidence 567888888643321110 111 11111222222 566555554 444588999976 222222
Q ss_pred EEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEecccc
Q 046684 282 LIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 282 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
.+..+..... .........++.+++.+. .+.+.+|+.. .. .|+....+.
T Consensus 243 ~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~-~~~~~~~~~~--~~--~~~~~~~~~ 291 (377)
T 3dwl_C 243 ALITVKLSQL---------PLRSLLWANESAIVAAGY-NYSPILLQGN--ES--GWAHTRDLD 291 (377)
T ss_dssp ECCCEECSSS---------CEEEEEEEETTEEEEEES-SSSEEEECCC--C-----CCSBCCC
T ss_pred eeEeecCCCC---------ceEEEEEcCCCCEEEEEc-CCcEEEEEeC--CC--ceEEEeeec
Confidence 2222221110 001223334666666554 4567799888 77 776555443
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.95 E-value=0.2 Score=45.17 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=74.7
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
+.+++|-+.. .+.+++||..|++...+-.+......... +...+ +++.++.|+.+ ..
T Consensus 114 S~~n~lAvgl----d~tV~lWd~~tg~~~~~~~~~~~~~~V~s-v~fsp--------dg~~lasgs~D----------g~ 170 (420)
T 4gga_A 114 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISS-VAWIK--------EGNYLAVGTSS----------AE 170 (420)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEE-EEECT--------TSSEEEEEETT----------SC
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCcEEE-EEECC--------CCCEEEEEECC----------Ce
Confidence 3466554433 36899999999987654333222221122 22211 15667777654 46
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCC-CceeEEE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRL-EFATLVS 250 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~-~~~~~~~ 250 (373)
+.+||..+++-...... + .........++.+.+.| .....+..+|......... .+.... ....+..
T Consensus 171 v~iWd~~~~~~~~~~~~-------h--~~~v~~~s~~~~~l~sg-s~d~~i~~~d~~~~~~~~~--~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTS-------H--SARVGSLSWNSYILSSG-SRSGHIHHHDVRVAEHHVA--TLSGHSQEVCGLRW 238 (420)
T ss_dssp EEEEETTTTEEEEEECC-------C--SSCEEEEEEETTEEEEE-ETTSEEEEEETTSSSCEEE--EEECCSSCEEEEEE
T ss_pred EEEEEcCCCcEEEEEeC-------C--CCceEEEeeCCCEEEEE-eCCCceeEeeecccceeeE--Eecccccceeeeee
Confidence 89999887653211111 0 01112244566665554 4566788888776543322 111111 1112222
Q ss_pred -ECCEEEEEEeecCCceEEEEeec
Q 046684 251 -RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 251 -~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
.+|...+.++ .+..+.+|+...
T Consensus 239 ~~~g~~l~s~~-~D~~v~i~~~~~ 261 (420)
T 4gga_A 239 APDGRHLASGG-NDNLVNVWPSAP 261 (420)
T ss_dssp CTTSSEEEEEE-TTSCEEEEESSC
T ss_pred cCCCCeeeeee-ccccceEEeecc
Confidence 2555555554 344578998875
No 127
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.94 E-value=0.49 Score=41.56 Aligned_cols=105 Identities=10% Similarity=0.032 Sum_probs=56.6
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
|.+.+.| .....+..+|+.+++.... .. .+......+.. ++.+++.++. +..+.+|++.. . ..+..+
T Consensus 210 g~~l~sg-s~Dg~v~~wd~~~~~~~~~-~~--~h~~~v~~v~~~p~~~~l~s~s~-D~~v~lwd~~~----~--~~~~~~ 278 (354)
T 2pbi_B 210 GNTFVSG-GCDKKAMVWDMRSGQCVQA-FE--THESDVNSVRYYPSGDAFASGSD-DATCRLYDLRA----D--REVAIY 278 (354)
T ss_dssp CCEEEEE-ETTSCEEEEETTTCCEEEE-EC--CCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT----T--EEEEEE
T ss_pred CCEEEEE-eCCCeEEEEECCCCcEEEE-ec--CCCCCeEEEEEeCCCCEEEEEeC-CCeEEEEECCC----C--cEEEEE
Confidence 4455553 4567799999988765433 11 11122222222 5666666554 44579999865 3 222222
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...... .......+..++.+++.++..+.+.+||.. ++
T Consensus 279 ~~~~~~-------~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~--~~ 316 (354)
T 2pbi_B 279 SKESII-------FGASSVDFSLSGRLLFAGYNDYTINVWDVL--KG 316 (354)
T ss_dssp CCTTCC-------SCEEEEEECTTSSEEEEEETTSCEEEEETT--TC
T ss_pred cCCCcc-------cceeEEEEeCCCCEEEEEECCCcEEEEECC--CC
Confidence 211100 000122333467777778777889999998 66
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.92 E-value=0.6 Score=43.89 Aligned_cols=245 Identities=9% Similarity=-0.001 Sum_probs=113.2
Q ss_pred eeEEEEeCCCCCccc-cCCCCCCCCceeE-Eee-CcEEEEeeCCCCceEEEEEcC--cccceeccCCCCCCCCCCeEEEE
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLPYPVRPV-SSI-GSFLLLRPINSTILQLVLCNP--FTRQFRYLPLLNVSRTNPAVGIV 137 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~-~~~-~g~l~~~gg~~~~~~~~v~np--~t~~w~~lp~~~~~~~~~~~~~~ 137 (373)
..+.++|..+.+... ++... ..+.+ .+- +..+|+.+. ...+.+||+ .|.+... .++.......++ +
T Consensus 159 ~~V~v~D~~t~~~~~~i~~g~---~~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~~--~i~~g~~p~~va-~ 229 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDTGY---AVHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKVA--EIKIGIEARSVE-S 229 (543)
T ss_dssp TEEEEEETTTCCEEEEEECST---TEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEEE--EEECCSEEEEEE-E
T ss_pred CeEEEEECCCceEEEEEecCc---ccceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEEE--EEecCCCcceEE-e
Confidence 466678988765432 22111 12333 333 456777665 378999999 6655322 222211111222 2
Q ss_pred EcCC-CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCC-ccccc-cceeccCCceEEE---CCEE
Q 046684 138 MEGP-AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMP-VEFAV-RLTVWTPNESVCT---RGML 211 (373)
Q Consensus 138 ~~~~-~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~~~~-~~~~~~~~~~~~~---~g~l 211 (373)
.+. +.+ +..+|+.... ...+.++|..+.+=...-..+ ..... ..........+.. ++.+
T Consensus 230 -sp~~~~d----g~~l~v~~~~----------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 230 -SKFKGYE----DRYTIAGAYW----------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp -CCSTTCT----TTEEEEEEEE----------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred -CCCcCCC----CCEEEEEEcc----------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 210 001 0456654422 246788898776532211110 00000 0000001111222 3444
Q ss_pred EEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhh
Q 046684 212 YWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEM 290 (373)
Q Consensus 212 y~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~ 290 (373)
|+. ......|..+|..+.+-..+ ...+....-..+ ..-+|+.+++.......+.+|++++ . +.+..++...
T Consensus 295 ~vs-~~~~g~i~vvd~~~~~~l~~-~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t----g--~l~~~i~~g~ 366 (543)
T 1nir_A 295 IVN-VKETGKVLLVNYKDIDNLTV-TSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD----R--RLSALVDVGK 366 (543)
T ss_dssp EEE-ETTTTEEEEEECTTSSSCEE-EEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT----T--EEEEEEECSS
T ss_pred EEE-ECCCCeEEEEEecCCCccee-EEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC----C--eEEEeeccCC
Confidence 444 45677899999886532111 011111111122 2336665555544455588888865 4 3444444221
Q ss_pred hhhhcCCCCCCCceEEEe-cCCEEEEEEc-CCccEEEEEccccCC---cccEEEecccccCC
Q 046684 291 GMRLSGGKASWGGTRCAA-GNGAICLYRE-VGLGMIIWREDEDKR---KWEWVWVGGCCLTG 347 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~~yd~~~~~~---~~~W~~~~~~~~~~ 347 (373)
..+ ++ +...++. .++.+|+.+. ..+.|.++|.+ +. +-.|+.+..++..+
T Consensus 367 ~ph--~g----~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~--~~~~~~~~~~~v~~l~~~g 420 (543)
T 1nir_A 367 TPH--PG----RGANFVHPKYGPVWSTSHLGDGSISLIGTD--PKNHPQYAWKKVAELQGQG 420 (543)
T ss_dssp SBC--CT----TCEEEEETTTEEEEEEEBSSSSEEEEEECC--TTTCTTTBTSEEEEEECSC
T ss_pred CCC--CC----CCcccCCCCCccEEEeccCCCceEEEEEeC--CCCCchhcCeEEEEEEcCC
Confidence 111 00 1233333 3578888775 45679999998 52 00277776665443
No 129
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.84 E-value=0.73 Score=39.14 Aligned_cols=115 Identities=10% Similarity=0.108 Sum_probs=58.0
Q ss_pred EEEEEEcCCceEEEEEECCCCc--EEecccCCCCCCCceeEEEE--C---CEEEEEEeecCCceEEEEeecCCCCCCeEE
Q 046684 210 MLYWITSARAYSVIGFDIESNT--WRELSAPMADRLEFATLVSR--N---QKLTLIGGTCGGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 210 ~ly~~gg~~~~~i~~yd~~~~~--w~~~~~~~p~~~~~~~~~~~--~---g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~ 282 (373)
.+.+.+ .....|..+|..+++ +... ..+..+......+.. + +.+++. +..+..+.+|+++. ....|..
T Consensus 171 ~~l~sg-s~D~~v~lwd~~~~~~~~~~~-~~l~~H~~~V~~v~~sp~~~~~~~las-~s~D~~v~iWd~~~--~~~~~~~ 245 (297)
T 2pm7_B 171 RKFVTG-GADNLVKIWKYNSDAQTYVLE-STLEGHSDWVRDVAWSPTVLLRSYMAS-VSQDRTCIIWTQDN--EQGPWKK 245 (297)
T ss_dssp CEEEEE-ETTSCEEEEEEETTTTEEEEE-EEECCCSSCEEEEEECCCCSSSEEEEE-EETTSCEEEEEESS--TTSCCEE
T ss_pred ceEEEE-cCCCcEEEEEEcCCCceEEEE-EEecCCCCceEEEEECCCCCCceEEEE-EECCCcEEEEEeCC--CCCccce
Confidence 444443 345567777776543 5443 233333222222332 2 244444 44555589999976 4445654
Q ss_pred EEeechhhhhhhcCCCCCCCceEE-EecCCEEEEEEcCCccEEEEEccccCCcccEEEec
Q 046684 283 IEKVPIEMGMRLSGGKASWGGTRC-AAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 283 v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
... ..... .. . ...+ ...++.+++.++..+.+.+|+... .+ .|..+.
T Consensus 246 ~~~-~~~~~----~~---~-v~~~~~s~~g~~las~~~D~~v~lw~~~~-~g--~w~~~~ 293 (297)
T 2pm7_B 246 TLL-KEEKF----PD---V-LWRASWSLSGNVLALSGGDNKVTLWKENL-EG--KWEPAG 293 (297)
T ss_dssp EES-SSSCC----SS---C-EEEEEECSSSCCEEEEETTSCEEEEEECT-TS--CEEEC-
T ss_pred eee-ecccC----CC---c-EEEEEECCCCCEEEEEcCCCcEEEEEECC-CC--cEEecc
Confidence 321 10000 00 0 1222 233566777777777899998762 45 687654
No 130
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.57 Score=40.68 Aligned_cols=106 Identities=10% Similarity=0.021 Sum_probs=53.2
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCC-------------ceEEEEeecC
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGG-------------DACVWELSEG 274 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~-------------~~~i~~~~~~ 274 (373)
++...+.+ .....|..||..+.+.... ...+.. .......-++...++++..+. .+.+|+...
T Consensus 229 ~~~~l~~~-~~d~~i~v~d~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~- 304 (369)
T 3zwl_B 229 DLTYFITS-SRDTNSFLVDVSTLQVLKK-YETDCP-LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF- 304 (369)
T ss_dssp TSSEEEEE-ETTSEEEEEETTTCCEEEE-EECSSC-EEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-
T ss_pred CCCEEEEe-cCCceEEEEECCCCceeee-ecCCCC-ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-
Confidence 45555553 4467899999988765443 221111 111112224555555443332 256776643
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
. +.+..+...... ........++.+++.++..+.+.+||++ ++
T Consensus 305 ---~--~~~~~~~~~~~~---------v~~~~~s~~~~~l~s~~~dg~v~iw~~~--~~ 347 (369)
T 3zwl_B 305 ---E--EEIGRVQGHFGP---------LNTVAISPQGTSYASGGEDGFIRLHHFE--KS 347 (369)
T ss_dssp ---C--CEEEEEECCSSC---------EEEEEECTTSSEEEEEETTSEEEEEEEC--HH
T ss_pred ---C--cchhheecccCc---------EEEEEECCCCCEEEEEcCCCeEEEEECc--cc
Confidence 2 233332211000 0122233366777778777889999998 66
No 131
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.81 E-value=0.028 Score=49.76 Aligned_cols=197 Identities=11% Similarity=0.021 Sum_probs=88.4
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|.+++.++. ...+.+||..++.|..+..+............ .+. ++.++.|+.+ ..+.
T Consensus 22 ~g~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~-s~~--------~~~l~s~s~d----------~~v~ 80 (377)
T 3dwl_C 22 QRTEFVTTTA--TNQVELYEQDGNGWKHARTFSDHDKIVTCVDW-APK--------SNRIVTCSQD----------RNAY 80 (377)
T ss_dssp SSSEEECCCS--SSCBCEEEEETTEEEECCCBCCCSSCEEEEEE-CTT--------TCCEEEEETT----------SSEE
T ss_pred CCCEEEEecC--CCEEEEEEccCCceEEEEEEecCCceEEEEEE-eCC--------CCEEEEEeCC----------CeEE
Confidence 4444455543 46788999998877666555433222222222 111 4455556543 3588
Q ss_pred EEECCCCc-eeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCc-EEecccCCCC-CCCce-e
Q 046684 174 MYDSRHDA-WQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNT-WRELSAPMAD-RLEFA-T 247 (373)
Q Consensus 174 ~yd~~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~-w~~~~~~~p~-~~~~~-~ 247 (373)
+||..++. |.....+.. .......+.+ ++...+.+ .....|..||+.+++ |..+ ..+.. ..... .
T Consensus 81 vwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~-~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLR-------LNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQENDWWVS-KHLKRPLRSTILS 151 (377)
T ss_dssp EC------CCCCEEECCC-------CSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----CCCC-EEECSSCCSCEEE
T ss_pred EEEcCCCCceeeeeEecc-------cCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCcccceee-eEeecccCCCeEE
Confidence 88888776 554433210 0011111111 45544443 345678888888765 3222 12222 22222 2
Q ss_pred EEEE-CCEEEEEEeecCCceEEEEeecCC-----CCCC-------eEEEEeechhhhhhhcCCCCCCCceEEEecCCEEE
Q 046684 248 LVSR-NQKLTLIGGTCGGDACVWELSEGG-----DDDI-------WCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAIC 314 (373)
Q Consensus 248 ~~~~-~g~l~~~gg~~~~~~~i~~~~~~~-----~~~~-------W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 314 (373)
+... ++++++.++.+ ..+.+|++.... .... -+.+..+.. .......+...++..+
T Consensus 152 ~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~sp~~~~l 220 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCAD-RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS----------GGWVHAVGFSPSGNAL 220 (377)
T ss_dssp EEECTTSSEEEEEESS-SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC----------SSSEEEEEECTTSSCE
T ss_pred EEEcCCCCEEEEEeCC-CEEEEEEEEecccCCCccccccccccchhhhhhcccC----------CceEEEEEECCCCCEE
Confidence 2222 56666665543 457999985310 0011 122222200 0000122233366667
Q ss_pred EEEcCCccEEEEEccccCC
Q 046684 315 LYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 315 ~~~~~~~~~~~yd~~~~~~ 333 (373)
+.++..+.+.+||.+ ++
T Consensus 221 ~~~~~d~~i~iwd~~--~~ 237 (377)
T 3dwl_C 221 AYAGHDSSVTIAYPS--AP 237 (377)
T ss_dssp EEEETTTEEC-CEEC--ST
T ss_pred EEEeCCCcEEEEECC--CC
Confidence 777777789999998 76
No 132
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.80 E-value=0.14 Score=46.54 Aligned_cols=193 Identities=9% Similarity=0.018 Sum_probs=91.3
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCC-CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
++.+++.|+. ...+.+||..+++...+-... ....-.++++ .+.. .+.++.|+.+ ..+
T Consensus 131 ~~~~lasGs~--dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f--~p~~-------~~~l~s~s~D----------~~v 189 (435)
T 4e54_B 131 HPSTVAVGSK--GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKF--NPLN-------TNQFYASSME----------GTT 189 (435)
T ss_dssp CTTCEEEEET--TSCEEEECSSCCSCCEEECCCSSSCCCCEEEE--CSSC-------TTEEEEECSS----------SCE
T ss_pred CCCEEEEEeC--CCEEEEEECCCCCceeEEEccCCCCCEEEEEE--eCCC-------CCEEEEEeCC----------CEE
Confidence 4434444432 467999999887654322221 1111122222 1111 3345555544 357
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR 251 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~ 251 (373)
.+||.+++.-+...... ..........+. +|.+.+.| .....|..+|+..+.-..+ ..+......+..
T Consensus 190 ~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g-~~dg~i~~wd~~~~~~~~~----~~h~~~v~~v~~ 258 (435)
T 4e54_B 190 RLQDFKGNILRVFASSD------TINIWFCSLDVSASSRMVVTG-DNVGNVILLNMDGKELWNL----RMHKKKVTHVAL 258 (435)
T ss_dssp EEEETTSCEEEEEECCS------SCSCCCCCEEEETTTTEEEEE-CSSSBEEEEESSSCBCCCS----BCCSSCEEEEEE
T ss_pred EEeeccCCceeEEeccC------CCCccEEEEEECCCCCEEEEE-eCCCcEeeeccCcceeEEE----ecccceEEeeee
Confidence 88998877655443321 001111222232 45666554 4567789999876543222 222222222332
Q ss_pred --CCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEc
Q 046684 252 --NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 252 --~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~ 328 (373)
++. +++.++ .+..+.+|++.. ....=......... ......++..++..++.++.++.+.+||.
T Consensus 259 ~p~~~~~~~s~s-~d~~v~iwd~~~--~~~~~~~~~~~~h~----------~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 259 NPCCDWFLATAS-VDQTVKIWDLRQ--VRGKASFLYSLPHR----------HPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp CTTCSSEEEEEE-TTSBCCEEETTT--CCSSSCCSBCCBCS----------SCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred cCCCceEEEEec-CcceeeEEeccc--ccccceEEEeeecc----------ccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 344 444444 444578999865 11100000000000 00001112235666677777778999999
Q ss_pred cccCC
Q 046684 329 DEDKR 333 (373)
Q Consensus 329 ~~~~~ 333 (373)
. +.
T Consensus 326 ~--~~ 328 (435)
T 4e54_B 326 S--QW 328 (435)
T ss_dssp S--SS
T ss_pred C--CC
Confidence 8 65
No 133
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.67 E-value=0.24 Score=42.43 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=54.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee-EEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT-LVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~-~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++.+.+.+ .....+..||+.+++-... .. ....... +.. -++.+++.++. +..+.+|++.. .+ .+..
T Consensus 118 ~~~~l~s~-~~d~~i~iwd~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~----~~--~~~~ 186 (312)
T 4ery_A 118 QSNLIVSG-SFDESVRIWDVKTGKCLKT-LP--AHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTAS----GQ--CLKT 186 (312)
T ss_dssp SSSEEEEE-ETTSCEEEEETTTCCEEEE-EC--CCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT----CC--EEEE
T ss_pred CCCEEEEE-eCCCcEEEEECCCCEEEEE-ec--CCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCC----Cc--eeeE
Confidence 34444443 4456789999987654322 11 1111122 222 25666666554 44579999864 32 2222
Q ss_pred echhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+...... .........++..++.++..+.+.+||.+ +.
T Consensus 187 ~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~ 224 (312)
T 4ery_A 187 LIDDDNP--------PVSFVKFSPNGKYILAATLDNTLKLWDYS--KG 224 (312)
T ss_dssp ECCSSCC--------CEEEEEECTTSSEEEEEETTTEEEEEETT--TT
T ss_pred EeccCCC--------ceEEEEECCCCCEEEEEcCCCeEEEEECC--CC
Confidence 2111000 00122333456666667777789999998 76
No 134
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.66 E-value=0.028 Score=49.74 Aligned_cols=188 Identities=7% Similarity=-0.072 Sum_probs=89.5
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
.+|..++.++. ...+.+||..+++.... +...... ..++...+.+ ..+++.++.+ ..+
T Consensus 149 pdg~~l~sgs~--dg~v~iwd~~~~~~~~~--~~~h~~~-v~~v~~s~~~-------~~~~~s~~~d----------g~v 206 (357)
T 4g56_B 149 SDGTQAVSGGK--DFSVKVWDLSQKAVLKS--YNAHSSE-VNCVAACPGK-------DTIFLSCGED----------GRI 206 (357)
T ss_dssp SSSSEEEEEET--TSCEEEEETTTTEEEEE--ECCCSSC-EEEEEECTTC-------SSCEEEEETT----------SCE
T ss_pred CCCCEEEEEeC--CCeEEEEECCCCcEEEE--EcCCCCC-EEEEEEccCC-------CceeeeeccC----------Cce
Confidence 35544444443 46789999988764331 1111111 1112111111 2355555543 357
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eEE
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TLV 249 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~ 249 (373)
.+||.++++-....... ........+++. ++.+.+.| .....|..||+.+.+-... +....... .++
T Consensus 207 ~~wd~~~~~~~~~~~~~------~~~~~v~~v~~sp~~~~~la~g-~~d~~i~~wd~~~~~~~~~---~~~~~~~v~~l~ 276 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFC------ASDTIPTSVTWHPEKDDTFACG-DETGNVSLVNIKNPDSAQT---SAVHSQNITGLA 276 (357)
T ss_dssp EECCTTSSSCBCBCCCT------TCCSCEEEEEECTTSTTEEEEE-ESSSCEEEEESSCGGGCEE---ECCCSSCEEEEE
T ss_pred EEEECCCCceeeeeeec------cccccccchhhhhcccceEEEe-ecccceeEEECCCCcEeEE---EeccceeEEEEE
Confidence 88888776532221110 000001112222 34555553 4456788999887542211 11111222 222
Q ss_pred E-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEE
Q 046684 250 S-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIW 326 (373)
Q Consensus 250 ~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~y 326 (373)
. .++.-+++.+..+..+.+|+++. . +.+..+.... . ...++. .++.+++.++.++.|.+|
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~----~--~~~~~~~H~~----------~-V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADF----S--EVFRDLSHRD----------F-VTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTS----C--EEEEECCCSS----------C-EEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCC----C--cEeEECCCCC----------C-EEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 2 24543444444445589998854 3 3333322110 0 122222 367778888888889999
Q ss_pred Ecc
Q 046684 327 RED 329 (373)
Q Consensus 327 d~~ 329 (373)
|+.
T Consensus 340 ~~~ 342 (357)
T 4g56_B 340 HLP 342 (357)
T ss_dssp ECC
T ss_pred ECC
Confidence 987
No 135
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.64 E-value=0.063 Score=47.28 Aligned_cols=189 Identities=7% Similarity=-0.043 Sum_probs=88.7
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.++. ...+.+||..+++-... +...... -.++...+.+ ..+++.|+.+ ..+.
T Consensus 138 dg~~l~sgs~--d~~i~iwd~~~~~~~~~--~~~h~~~-V~~~~~~~~~-------~~~l~s~s~D----------~~v~ 195 (344)
T 4gqb_B 138 SGTQAVSGSK--DICIKVWDLAQQVVLSS--YRAHAAQ-VTCVAASPHK-------DSVFLSCSED----------NRIL 195 (344)
T ss_dssp TSSEEEEEET--TSCEEEEETTTTEEEEE--ECCCSSC-EEEEEECSSC-------TTEEEEEETT----------SCEE
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEE--EcCcCCc-eEEEEecCCC-------CCceeeeccc----------cccc
Confidence 5544444443 45789999988764321 1111111 1112221111 3466666554 3588
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR 251 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~ 251 (373)
+||.++++-...-... ........+++. ++.+.+.| .....|..||+.+.+- + ..+..+......+..
T Consensus 196 iwd~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~l~sg-~~dg~v~~wd~~~~~~--~-~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 196 LWDTRCPKPASQIGCS------APGYLPTSLAWHPQQSEVFVFG-DENGTVSLVDTKSTSC--V-LSSAVHSQCVTGLVF 265 (344)
T ss_dssp EEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEE-ETTSEEEEEESCC--C--C-EEEECCSSCEEEEEE
T ss_pred cccccccceeeeeecc------eeeccceeeeecCCCCcceEEe-ccCCcEEEEECCCCcE--E-EEEcCCCCCEEEEEE
Confidence 9999876532221111 000011112222 34555554 4567788999986542 1 112222222222222
Q ss_pred --CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEE
Q 046684 252 --NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 252 --~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd 327 (373)
+|.-+++.+..+..+.+|++.. . +.+ .+.. + ... ...+.. .+..+++.++.++.|.+++
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~----~--~~~-~~~~----H-----~~~-V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSL----S--ELF-RSQA----H-----RDF-VRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTC----C--EEE-EECC----C-----SSC-EEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred ccCCCeEEEEEeCCCeEEEEECCC----C--cEE-EEcC----C-----CCC-EEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 4533444444555589998754 3 222 2110 0 000 122222 3556777788888899999
Q ss_pred ccccCC
Q 046684 328 EDEDKR 333 (373)
Q Consensus 328 ~~~~~~ 333 (373)
.. +.
T Consensus 329 v~--~~ 332 (344)
T 4gqb_B 329 VP--TE 332 (344)
T ss_dssp CC--C-
T ss_pred CC--CC
Confidence 98 55
No 136
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.61 E-value=1.3 Score=40.22 Aligned_cols=112 Identities=8% Similarity=0.052 Sum_probs=60.1
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCC------------------------CCCCceeEEEE-CCEEEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMA------------------------DRLEFATLVSR-NQKLTLIGGTC 262 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p------------------------~~~~~~~~~~~-~g~l~~~gg~~ 262 (373)
+|.+.+.++ ....|..||+.+++.... .... .......+... +++.+++++..
T Consensus 251 d~~~l~s~~-~d~~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 251 KDYLLLSAG-GDDKIFAWDWKTGKNLST-FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp STTEEEEEE-SSSEEEEEETTTCCEEEE-EECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCEEEEEe-CCCeEEEEECCCCcEeee-ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 666666643 567899999988764332 1110 00111122222 45555555535
Q ss_pred CCceEEEEe-ecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-------Cc--cEEEEEccccC
Q 046684 263 GGDACVWEL-SEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-------GL--GMIIWREDEDK 332 (373)
Q Consensus 263 ~~~~~i~~~-~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~--~~~~yd~~~~~ 332 (373)
...+.+|++ +. ....+..+..+.... . ...+....+.+++..+. .. .++.++.+ +
T Consensus 329 d~~i~iw~~~~~--~~~~l~~~~~~~~~~-~----------v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~--~ 393 (450)
T 2vdu_B 329 TKCIIILEMSEK--QKGDLALKQIITFPY-N----------VISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN--E 393 (450)
T ss_dssp CSEEEEEEECSS--STTCEEEEEEEECSS-C----------EEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT--T
T ss_pred CCeEEEEEeccC--CCCceeeccEeccCC-c----------eEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC--C
Confidence 556899999 33 345677776665431 1 24444455667766533 22 45555666 8
Q ss_pred CcccEE
Q 046684 333 RKWEWV 338 (373)
Q Consensus 333 ~~~~W~ 338 (373)
+ +|+
T Consensus 394 ~--~~~ 397 (450)
T 2vdu_B 394 N--SFV 397 (450)
T ss_dssp T--EEE
T ss_pred C--eEE
Confidence 8 554
No 137
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.54 E-value=1.4 Score=43.57 Aligned_cols=216 Identities=11% Similarity=0.115 Sum_probs=110.0
Q ss_pred eEEEEeCCCCCccccCC--CCCCCCc-eeEE-eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCC--CCC-CCCeEEE
Q 046684 64 CCYVHNPVSDKWHVLSL--DFLPYPV-RPVS-SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLN--VSR-TNPAVGI 136 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~--~~~~~~~-~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~--~~~-~~~~~~~ 136 (373)
.+..||+.++++..+.. +.++... .++. -.+|.|++... .-+++||+.+++++.+.... ... .....++
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 503 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTL 503 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEE
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCCceEEEE
Confidence 46668887776655432 1122111 1222 22577777653 35899999999998765331 111 1122233
Q ss_pred EEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEE
Q 046684 137 VMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWI 214 (373)
Q Consensus 137 ~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~ 214 (373)
..+. + +++++... . .+.+||..++++ .....+.. . ............ +|.+++.
T Consensus 504 ~~d~---~-----g~lWigt~-~-----------Gl~~~~~~~~~~-~~~~~~~~-~--~l~~~~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 504 FRDS---H-----KRLWIGGE-E-----------GLSVFKQEGLDI-QKASILPV-S--NVTKLFTNCIYEASNGIIWVG 559 (795)
T ss_dssp EECT---T-----CCEEEEES-S-----------CEEEEEEETTEE-EECCCSCS-C--GGGGSCEEEEEECTTSCEEEE
T ss_pred EECC---C-----CCEEEEeC-C-----------ceEEEeCCCCeE-EEecCCCC-C--CCCCCeeEEEEECCCCCEEEE
Confidence 3321 1 66777542 2 478899888887 43321000 0 000111112333 4676655
Q ss_pred EcCCceEEEEEECCCCcEEecccC--CCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe---ech
Q 046684 215 TSARAYSVIGFDIESNTWRELSAP--MADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK---VPI 288 (373)
Q Consensus 215 gg~~~~~i~~yd~~~~~w~~~~~~--~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~---~p~ 288 (373)
+ . ..+..||+.++++...... +|... ...++. -+|.|++.+. ..+..|+++. .++..... ++.
T Consensus 560 T-~--~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~---~Gl~~~~~~~----~~~~~~~~~dGl~~ 628 (795)
T 4a2l_A 560 T-R--EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN---RGISCFNPET----EKFRNFTESDGLQS 628 (795)
T ss_dssp E-S--SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET---TEEEEEETTT----TEEEEECGGGTCSC
T ss_pred e-C--CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC---CceEEEcCCC----CcEEEcCCcCCCcc
Confidence 3 2 2799999999998876221 12211 122333 2678887762 3355666644 66554332 111
Q ss_pred hhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 289 EMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+. ....+...+|.||+-+.. .+..||++
T Consensus 629 ~~f~---------~~~~~~~~~G~l~~g~~~--Gl~~~~p~ 658 (795)
T 4a2l_A 629 NQFN---------TASYCRTSVGQMYFGGIN--GITTFRPE 658 (795)
T ss_dssp SCEE---------EEEEEECTTSCEEEEETT--EEEEECGG
T ss_pred ccCc---------cCceeECCCCeEEEecCC--ceEEEcHH
Confidence 1110 012334457788885433 68888887
No 138
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.87 Score=40.44 Aligned_cols=150 Identities=10% Similarity=0.051 Sum_probs=72.8
Q ss_pred EEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EEEEEEcCCce---EEEEE
Q 046684 151 RIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSARAY---SVIGF 225 (373)
Q Consensus 151 kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~---~i~~y 225 (373)
++++.++.+ ..+.+||..+++-...-..+... .........+++. +| .+++.++ ... .|..|
T Consensus 179 ~~l~~~~~d----------g~v~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~~~i~~~ 245 (416)
T 2pm9_A 179 HVFASAGSS----------NFASIWDLKAKKEVIHLSYTSPN--SGIKQQLSVVEWHPKNSTRVATAT-GSDNDPSILIW 245 (416)
T ss_dssp TEEEEESSS----------SCEEEEETTTTEEEEEECCCCCS--SCCCCCEEEEEECSSCTTEEEEEE-CCSSSCCCCEE
T ss_pred cEEEEEcCC----------CCEEEEECCCCCcceEEeccccc--cccCCceEEEEECCCCCCEEEEEE-CCCCCceEEEE
Confidence 456666544 35899999886643322221000 0000011112222 23 4555543 233 78899
Q ss_pred ECCCCcEEecccCCC-CCCCce-eEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCC
Q 046684 226 DIESNTWRELSAPMA-DRLEFA-TLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASW 301 (373)
Q Consensus 226 d~~~~~w~~~~~~~p-~~~~~~-~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~ 301 (373)
|+.+..-. + ..+. ...... .+... ++.+++.++. +..+.+|+++. . +.+..+..... ..
T Consensus 246 d~~~~~~~-~-~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~wd~~~----~--~~~~~~~~~~~--------~v 308 (416)
T 2pm9_A 246 DLRNANTP-L-QTLNQGHQKGILSLDWCHQDEHLLLSSGR-DNTVLLWNPES----A--EQLSQFPARGN--------WC 308 (416)
T ss_dssp ETTSTTSC-S-BCCCSCCSSCEEEEEECSSCSSCEEEEES-SSEEEEECSSS----C--CEEEEEECSSS--------CC
T ss_pred eCCCCCCC-c-EEeecCccCceeEEEeCCCCCCeEEEEeC-CCCEEEeeCCC----C--ccceeecCCCC--------ce
Confidence 99875311 1 1122 122222 22222 5666666654 44578998865 2 33333332110 01
Q ss_pred CceEEEecCC-EEEEEEcCCccEEEEEccccCC
Q 046684 302 GGTRCAAGNG-AICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 302 ~~~~~~~~~~-~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.......++ .+++.++..+.+.+||+. +.
T Consensus 309 -~~~~~s~~~~~~l~s~~~d~~i~iw~~~--~~ 338 (416)
T 2pm9_A 309 -FKTKFAPEAPDLFACASFDNKIEVQTLQ--NL 338 (416)
T ss_dssp -CCEEECTTCTTEEEECCSSSEEEEEESC--CC
T ss_pred -EEEEECCCCCCEEEEEecCCcEEEEEcc--CC
Confidence 122233344 788888888889999998 55
No 139
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.49 E-value=0.33 Score=43.62 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=34.6
Q ss_pred CEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccC
Q 046684 253 QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDK 332 (373)
Q Consensus 253 g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~ 332 (373)
|.+++.+ ..+..+.+|++.. . ..+..+..-. ......++..++..++.++.++.+.+||.+ +
T Consensus 308 g~~l~sg-s~D~~i~iwd~~~----~--~~~~~~~~h~---------~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~--~ 369 (410)
T 1vyh_C 308 GPFLLSG-SRDKTIKMWDVST----G--MCLMTLVGHD---------NWVRGVLFHSGGKFILSCADDKTLRVWDYK--N 369 (410)
T ss_dssp CCEEEEE-ETTSEEEEEETTT----T--EEEEEEECCS---------SCEEEEEECSSSSCEEEEETTTEEEEECCT--T
T ss_pred CCEEEEE-eCCCeEEEEECCC----C--ceEEEEECCC---------CcEEEEEEcCCCCEEEEEeCCCeEEEEECC--C
Confidence 4444444 4455589999864 2 2333332100 000122233356666777777789999998 6
Q ss_pred C
Q 046684 333 R 333 (373)
Q Consensus 333 ~ 333 (373)
+
T Consensus 370 ~ 370 (410)
T 1vyh_C 370 K 370 (410)
T ss_dssp S
T ss_pred C
Confidence 6
No 140
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.47 E-value=1.1 Score=38.79 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=35.6
Q ss_pred CEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 253 QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 253 g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
+.+++.++ .+..+.+|++.. ....-..+..+...... . .....+...++..++.++.++.+.+||+.
T Consensus 299 ~~~l~~~~-~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~---~----~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGN-QVGKLYVWDLEV--EDPHKAKCTTLTHHKCG---A----AIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEEC-TTSCEEEEECCS--SSGGGCEEEEECCTTCC---S----CEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEe-cCCcEEEEECCC--CCCccccceEEcccccC---C----ceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 67666664 344589999976 22222233333321100 0 00122333466777777777889999986
No 141
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.46 E-value=1.2 Score=39.11 Aligned_cols=260 Identities=8% Similarity=-0.035 Sum_probs=117.7
Q ss_pred CceEEEEEecCCCeeEEEEeCCCCCccccCCCCCCCCceeEEeeCc-EEEEeeCCCCceEEEEEcCcccceeccCCCCCC
Q 046684 50 PAWFLALPTRNRGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGS-FLLLRPINSTILQLVLCNPFTRQFRYLPLLNVS 128 (373)
Q Consensus 50 ~~~l~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g-~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~ 128 (373)
...++.....+....++.+|..+.....+............-+.+| .|++... ...++++|+.+++-+.+-..+..
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~---~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD---GRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET---TTEEEEEETTTCCEEEEEECCTT
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC---CCeEEEEECCCCcceeeeechhh
Confidence 3345554443444678889998877666643222211112234444 5555554 35899999999886655433322
Q ss_pred CCCCeEEEEEcCCCCCCCCCceEEEEEeccCCC--CCC---------CCcccceEEEEECCCCceeeecCCCccccccce
Q 046684 129 RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDE--PRG---------GATYESMVEMYDSRHDAWQIIGSMPVEFAVRLT 197 (373)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~--~~~---------~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~ 197 (373)
... .......+.+ ..++.+...... ... .......++++|..+++-+.+...+.
T Consensus 124 ~~~-~~~~~~~~dg-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~------- 188 (388)
T 3pe7_A 124 WVG-YGTWVANSDC-------TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ------- 188 (388)
T ss_dssp EEE-EEEEEECTTS-------SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-------
T ss_pred ccc-ccceeECCCC-------CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-------
Confidence 110 1111111111 223222110000 000 01223678999998887555432210
Q ss_pred eccCCceEE-E-CCE-EEEEEcC----CceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCE-EEEEEeecCC-ceE
Q 046684 198 VWTPNESVC-T-RGM-LYWITSA----RAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQK-LTLIGGTCGG-DAC 267 (373)
Q Consensus 198 ~~~~~~~~~-~-~g~-ly~~gg~----~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~-l~~~gg~~~~-~~~ 267 (373)
.. ....+ - +|+ |.+.... ....|+.+|+++.+...+ ............ ..-+|+ |+.+....+. ...
T Consensus 189 -~~-~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (388)
T 3pe7_A 189 -WL-GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV-KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRF 265 (388)
T ss_dssp -CE-EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES-CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEE
T ss_pred -cc-cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe-eeCCCCcccccceECCCCCEEEEEecCCCCCcce
Confidence 01 11122 2 444 3333211 145799999988776666 222211111111 222565 5555443333 223
Q ss_pred EEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEE--------cCCccEEEEEccccCCcccEEE
Q 046684 268 VWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYR--------EVGLGMIIWREDEDKRKWEWVW 339 (373)
Q Consensus 268 i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~yd~~~~~~~~~W~~ 339 (373)
+|.++. ++.+-+.+...+........ .........|..|++.. .....++++|++ ++ +-+.
T Consensus 266 l~~~d~--~~g~~~~l~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~--~~--~~~~ 334 (388)
T 3pe7_A 266 IYSADP--ETLENRQLTSMPACSHLMSN-----YDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK--NG--TQHR 334 (388)
T ss_dssp EEEECT--TTCCEEEEEEECCEEEEEEC-----TTSSEEEEEECCC------------CCCCEEEEEETT--TT--EEEE
T ss_pred EEEEec--CCCceEEEEcCCCceeeeec-----CCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc--CC--ceEE
Confidence 444443 34666666555531000000 00123444555555432 334579999998 87 5555
Q ss_pred ec
Q 046684 340 VG 341 (373)
Q Consensus 340 ~~ 341 (373)
+.
T Consensus 335 l~ 336 (388)
T 3pe7_A 335 VA 336 (388)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 142
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.46 E-value=0.31 Score=42.17 Aligned_cols=146 Identities=5% Similarity=-0.017 Sum_probs=78.6
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCC---ceEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSAR---AYSVIGF 225 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~---~~~i~~y 225 (373)
+++|+.+... ..+.+||..+++.+.+...+. ......+. -+|.+|+..... ...|..|
T Consensus 56 g~l~~~~~~~----------~~i~~~d~~~~~~~~~~~~~~--------~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 56 GQLFLLDVFE----------GNIFKINPETKEIKRPFVSHK--------ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SCEEEEETTT----------CEEEEECTTTCCEEEEEECSS--------SSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CCEEEEECCC----------CEEEEEeCCCCcEEEEeeCCC--------CCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 6688876432 468999998888765432110 01111222 257888774221 2589999
Q ss_pred ECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeec---CCceEEEEeecCCCCCCeEEEEe-echhhhhhhcCCCCC
Q 046684 226 DIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTC---GGDACVWELSEGGDDDIWCLIEK-VPIEMGMRLSGGKAS 300 (373)
Q Consensus 226 d~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~---~~~~~i~~~~~~~~~~~W~~v~~-~p~~~~~~~~~~~~~ 300 (373)
|+++++...+-........-..++. -+|++|+..... .....+|.++. ++.+...+.. ...
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~------------ 183 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSP--DFRTVTPIIQNISV------------ 183 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECT--TSCCEEEEEEEESS------------
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeC--CCCEEEEeecCCCc------------
Confidence 9998876633111111111122222 367888865421 11246888765 4455554422 111
Q ss_pred CCceEE-Ee-cCCEEEEEEcCCccEEEEEcc
Q 046684 301 WGGTRC-AA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 301 ~~~~~~-~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
+..+ .. .++.||+.......+.+||++
T Consensus 184 --~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 184 --ANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp --EEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred --ccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 1222 22 344688877666679999985
No 143
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.46 E-value=0.87 Score=40.15 Aligned_cols=22 Identities=5% Similarity=0.096 Sum_probs=16.8
Q ss_pred CCEEEEEEcCC---ccEEEEEccccCC
Q 046684 310 NGAICLYREVG---LGMIIWREDEDKR 333 (373)
Q Consensus 310 ~~~i~~~~~~~---~~~~~yd~~~~~~ 333 (373)
++.+++.++.. +.+.+||++ +.
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~--~~ 268 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETE--FG 268 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETT--TC
T ss_pred CCCEEEEEecCCCCceEEEEECC--CC
Confidence 56666666666 789999998 76
No 144
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.45 E-value=0.21 Score=43.12 Aligned_cols=195 Identities=12% Similarity=0.077 Sum_probs=92.3
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.++. ...+.+||..+++...+..+........ ++....... +++++.|+.+ ..+.
T Consensus 24 ~g~~lasgs~--D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~------~~~l~s~s~D----------~~v~ 84 (316)
T 3bg1_A 24 YGTRLATCSS--DRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMY------GNILASCSYD----------RKVI 84 (316)
T ss_dssp GGCEEEEEET--TTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGG------SSCEEEEETT----------SCEE
T ss_pred CCCEEEEEeC--CCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCC------CCEEEEEECC----------CEEE
Confidence 4444444443 4678888887765332222221111111 111111000 3455555544 4588
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE-C--CEEEEEEcCCceEEEEEECCCC-cEEecccCCCCCCCceeEE
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-R--GMLYWITSARAYSVIGFDIESN-TWRELSAPMADRLEFATLV 249 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~--g~ly~~gg~~~~~i~~yd~~~~-~w~~~~~~~p~~~~~~~~~ 249 (373)
+||.+++.|.....+.. ....-..+++. + |.+.+. +.....+..+|..++ .|... .....+......+
T Consensus 85 iWd~~~~~~~~~~~~~~------h~~~V~~v~~~p~~~g~~las-gs~D~~i~lwd~~~~~~~~~~-~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAG------HDSSVNSVCWAPHDYGLILAC-GSSDGAISLLTYTGEGQWEVK-KINNAHTIGCNAV 156 (316)
T ss_dssp EECCSSSCCCEEEEECC------CSSCCCEEEECCTTTCSCEEE-ECSSSCEEEEEECSSSCEEEC-CBTTSSSSCBCCC
T ss_pred EEECCCCcceEEEEccC------CCCceEEEEECCCCCCcEEEE-EcCCCCEEEEecCCCCCccee-eeeccccCCcceE
Confidence 99998887765433210 00111122222 2 444444 445667888888765 56543 2221111111001
Q ss_pred EE-------------------CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec-
Q 046684 250 SR-------------------NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG- 309 (373)
Q Consensus 250 ~~-------------------~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~- 309 (373)
.. .+++++.+ ..+..+.+|+++. ...|..+..+..-.. . ...+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lWd~~~---~~~~~~~~~l~~h~~---------~-V~~v~~sp 222 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASG-GCDNLIKLWKEEE---DGQWKEEQKLEAHSD---------W-VRDVAWAP 222 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECC-BTTSBCCEEEECT---TSCEEEEECCBCCSS---------C-EEEEECCC
T ss_pred EEccccCCccccccccccCccccceEEEe-cCCCeEEEEEeCC---CCccceeeecccCCC---------c-eEEEEecC
Confidence 10 02334443 4445579999963 356877665432110 0 1222221
Q ss_pred C----CEEEEEEcCCccEEEEEcc
Q 046684 310 N----GAICLYREVGLGMIIWRED 329 (373)
Q Consensus 310 ~----~~i~~~~~~~~~~~~yd~~ 329 (373)
+ +.+++.++.++.+.+||.+
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECS
T ss_pred CCCCCCceEEEEcCCCeEEEEEcc
Confidence 2 2567777777789999987
No 145
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.44 E-value=2.1 Score=41.58 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=71.3
Q ss_pred cceEEEEECCC------C--ceeeecCCCccccccceeccCCceEEECCEEEEEEcC--CceEEEEEECCCC---cEEec
Q 046684 169 ESMVEMYDSRH------D--AWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA--RAYSVIGFDIESN---TWREL 235 (373)
Q Consensus 169 ~~~~~~yd~~~------~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~--~~~~i~~yd~~~~---~w~~~ 235 (373)
...++++|..+ + .++.+..-.. ... .....-++.+|+.+.. ....|+.+|+.+. .|+.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-------~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFE-------GEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSS-------SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCC-------cEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceec
Confidence 46789999876 4 5776654311 011 1112235678887532 2457999999875 58877
Q ss_pred ccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCE
Q 046684 236 SAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGA 312 (373)
Q Consensus 236 ~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 312 (373)
.+......-..+... ++.|++....++. ..+|..+. .+.+ .+..++.+... ...+.. .++.
T Consensus 330 -~~~~~~~~~~~~~~~~~~~lv~~~~~~g~-~~l~~~~~--~~g~--~~~~l~~~~~~----------v~~~~~s~d~~~ 393 (710)
T 2xdw_A 330 -VPEHEKDVLEWVACVRSNFLVLCYLHDVK-NTLQLHDL--ATGA--LLKIFPLEVGS----------VVGYSGQKKDTE 393 (710)
T ss_dssp -ECCCSSCEEEEEEEETTTEEEEEEEETTE-EEEEEEET--TTCC--EEEEECCCSSE----------EEEEECCTTCSE
T ss_pred -cCCCCCCeEEEEEEEcCCEEEEEEEECCE-EEEEEEEC--CCCC--EEEecCCCCce----------EEEEecCCCCCE
Confidence 343221112234445 6777777654443 34554442 1233 22333322100 112222 3446
Q ss_pred EEEEEc---CCccEEEEEccccCC
Q 046684 313 ICLYRE---VGLGMIIWREDEDKR 333 (373)
Q Consensus 313 i~~~~~---~~~~~~~yd~~~~~~ 333 (373)
+++... ....++.||++ ++
T Consensus 394 l~~~~ss~~~P~~i~~~d~~--tg 415 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLT--KE 415 (710)
T ss_dssp EEEEEECSSCCCEEEEEETT--SS
T ss_pred EEEEEeCCCCCCEEEEEECC--CC
Confidence 665432 22469999998 87
No 146
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.41 E-value=1.2 Score=38.65 Aligned_cols=153 Identities=7% Similarity=-0.009 Sum_probs=77.6
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.++. ...+.+||..+++-..+-.........+++ .. + ++++++.|+.+ ..+.
T Consensus 138 ~~~~l~s~s~--dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~-~~-p--------dg~~lasg~~d----------g~i~ 195 (343)
T 3lrv_A 138 NTEYFIWADN--RGTIGFQSYEDDSQYIVHSAKSDVEYSSGV-LH-K--------DSLLLALYSPD----------GILD 195 (343)
T ss_dssp -CCEEEEEET--TCCEEEEESSSSCEEEEECCCSSCCCCEEE-EC-T--------TSCEEEEECTT----------SCEE
T ss_pred CCCEEEEEeC--CCcEEEEECCCCcEEEEEecCCCCceEEEE-EC-C--------CCCEEEEEcCC----------CEEE
Confidence 3444444432 467899999888764332222111111222 21 1 16777777654 4689
Q ss_pred EEECCCCcee--eecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEE-ecccCCCCCC---Cc
Q 046684 174 MYDSRHDAWQ--IIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWR-ELSAPMADRL---EF 245 (373)
Q Consensus 174 ~yd~~~~~W~--~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~-~~~~~~p~~~---~~ 245 (373)
+||.++++-. .+.. . +. .....+.+ +|...+.++ . ..|..+|+.+.+-. .+ .+..... ..
T Consensus 196 iwd~~~~~~~~~~~~~-~------h~--~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~ 263 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPV-D------EE--AKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAY-PTYTIPEFKTGT 263 (343)
T ss_dssp EEESSCTTSCCEECCC-C------TT--SCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSS-CCCBC-----CC
T ss_pred EEECCCCCCCccEEec-c------CC--CCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceee-cccccccccccc
Confidence 9999876532 1111 0 00 11111222 455555544 2 38999999876421 12 1111111 11
Q ss_pred eeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEE
Q 046684 246 ATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 246 ~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~ 282 (373)
..++. .+|+.+++++..+..+.+|+++. ..+.|+.
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~~~--~~~~~~~ 299 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKFDK--KTKNWTK 299 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECT--TTCSEEE
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEEcc--cccceEe
Confidence 11222 25666666544355689999987 6678987
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.39 E-value=1.1 Score=38.15 Aligned_cols=104 Identities=8% Similarity=0.005 Sum_probs=53.2
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE----CCEEEEEEeecCCceEEEEeecCCCCCCeEEEE
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR----NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~----~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~ 284 (373)
+.+.+.| .....|..+|+.+.+-... ..... ......+.. ++.+++. +..+..+.+|++.. . +.+.
T Consensus 153 ~~~l~sg-s~D~~v~iwd~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~~~l~s-~s~D~~i~iWd~~~----~--~~~~ 222 (304)
T 2ynn_A 153 PSTFASG-CLDRTVKVWSLGQSTPNFT-LTTGQ-ERGVNYVDYYPLPDKPYMIT-ASDDLTIKIWDYQT----K--SCVA 222 (304)
T ss_dssp TTEEEEE-ETTSEEEEEETTCSSCSEE-EECCC-TTCEEEEEECCSTTCCEEEE-EETTSEEEEEETTT----T--EEEE
T ss_pred CCEEEEE-eCCCeEEEEECCCCCccce-eccCC-cCcEEEEEEEEcCCCCEEEE-EcCCCeEEEEeCCC----C--ccce
Confidence 4455553 4567788999865432111 01111 111122222 3444444 44555689999864 2 3344
Q ss_pred eechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 285 KVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 285 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+..-.. .....+...++.+++.++..+.+.+||.+ +.
T Consensus 223 ~~~~h~~---------~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~--~~ 260 (304)
T 2ynn_A 223 TLEGHMS---------NVSFAVFHPTLPIIISGSEDGTLKIWNSS--TY 260 (304)
T ss_dssp EEECCSS---------CEEEEEECSSSSEEEEEETTSCEEEEETT--TC
T ss_pred eeCCCCC---------CEEEEEECCCCCEEEEEcCCCeEEEEECC--CC
Confidence 4321110 00122333456677778888889999999 76
No 148
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.33 E-value=0.9 Score=44.66 Aligned_cols=178 Identities=9% Similarity=0.008 Sum_probs=87.2
Q ss_pred ceEEEEEcCcccceec-cCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceee
Q 046684 106 ILQLVLCNPFTRQFRY-LPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI 184 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~ 184 (373)
...+.+||..+++... +.... .......... +++.++.|+.+ ..+.+||..+++...
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~---~~v~~~~~s~---------~~~~l~~~~~d----------g~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTE---TPVRAGKFIA---------RKNWIIVGSDD----------FRIRVFNYNTGEKVV 91 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCS---SCEEEEEEEG---------GGTEEEEEETT----------SEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCceEEEEecCC---CcEEEEEEeC---------CCCEEEEEeCC----------CeEEEEECCCCcEEE
Confidence 4578888888765433 22111 1112222221 15556666543 468999988776432
Q ss_pred ecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCC-cEEecccCCCCCCCceeEEEE--CCEEEEEEe
Q 046684 185 IGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESN-TWRELSAPMADRLEFATLVSR--NQKLTLIGG 260 (373)
Q Consensus 185 ~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~-~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg 260 (373)
.-... ...-..+++. +|...+. +.....+..||+.++ ..... .. .....-..+... ++.+++.++
T Consensus 92 ~~~~~--------~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~-~~-~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 92 DFEAH--------PDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQT-FE-GHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEECC--------SSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEEEEE-EE-CCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEecC--------CCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceEEEE-Ec-CCCCcEEEEEEEcCCCCEEEEEe
Confidence 21110 0001111222 4544444 345678999998876 33222 11 111111223333 345555554
Q ss_pred ecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec--CCEEEEEEcCCccEEEEEccccCC
Q 046684 261 TCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG--NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 261 ~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+..+.+|++.. ............... ....... ++..++.++..+.+.+||.+ ++
T Consensus 161 -~dg~v~vwd~~~--~~~~~~~~~~~~~~v------------~~~~~~~~~~~~~l~~~~~dg~i~~~d~~--~~ 218 (814)
T 3mkq_A 161 -LDRTVKVWSLGQ--STPNFTLTTGQERGV------------NYVDYYPLPDKPYMITASDDLTIKIWDYQ--TK 218 (814)
T ss_dssp -TTSEEEEEETTC--SSCSEEEECCCTTCC------------CEEEECCSTTCCEEEEECTTSEEEEEETT--TT
T ss_pred -CCCeEEEEECCC--CcceeEEecCCCCCE------------EEEEEEECCCCCEEEEEeCCCEEEEEECC--CC
Confidence 445588999865 223332221111111 1223333 56677777777889999998 77
No 149
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.31 E-value=1.2 Score=37.87 Aligned_cols=147 Identities=14% Similarity=0.159 Sum_probs=74.5
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--C--CEEEEEEcCCceEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--R--GMLYWITSARAYSVIGF 225 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~--g~ly~~gg~~~~~i~~y 225 (373)
+++++.|+.+ ..+.+||..++.|..+..+.. . ......+.+ + |.+.+.+ .....|..+
T Consensus 67 g~~l~s~s~D----------~~v~iWd~~~~~~~~~~~~~~------h-~~~v~~v~~~p~~~g~~l~s~-s~d~~v~~w 128 (297)
T 2pm7_B 67 GTILASCSYD----------GKVMIWKEENGRWSQIAVHAV------H-SASVNSVQWAPHEYGPMLLVA-SSDGKVSVV 128 (297)
T ss_dssp CSEEEEEETT----------TEEEEEEBSSSCBCCCEEECC------C-SSCEEEEEECCGGGCSEEEEE-ETTSEEEEE
T ss_pred CCEEEEEcCC----------CEEEEEEcCCCceEEEEEeec------C-CCceeEEEeCcCCCCcEEEEE-ECCCcEEEE
Confidence 3456666554 468899998887765432210 0 011111222 1 4444443 456778888
Q ss_pred ECCCCc-EEecccCCCCCCCceeEEEE---------------CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechh
Q 046684 226 DIESNT-WRELSAPMADRLEFATLVSR---------------NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIE 289 (373)
Q Consensus 226 d~~~~~-w~~~~~~~p~~~~~~~~~~~---------------~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~ 289 (373)
|+.++. +... ....+......+.. ++++++.++ .+..+.+|+++. ....|..+..+..-
T Consensus 129 d~~~~~~~~~~--~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-~D~~v~lwd~~~--~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 129 EFKENGTTSPI--IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNS--DAQTYVLESTLEGH 203 (297)
T ss_dssp EBCSSSCBCCE--EEECCSSCEEEEEECCCC------------CCEEEEEE-TTSCEEEEEEET--TTTEEEEEEEECCC
T ss_pred EecCCCceeee--eeecccCccceEeecCCcccccccCCCCCCcceEEEEc-CCCcEEEEEEcC--CCceEEEEEEecCC
Confidence 887652 2111 11111111111111 134555554 444589999986 44557666555421
Q ss_pred hhhhhcCCCCCCCceEEEec-C---CEEEEEEcCCccEEEEEcc
Q 046684 290 MGMRLSGGKASWGGTRCAAG-N---GAICLYREVGLGMIIWRED 329 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~-~---~~i~~~~~~~~~~~~yd~~ 329 (373)
... ...+... + +.+++.++.++.+.+||.+
T Consensus 204 ~~~----------V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 204 SDW----------VRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp SSC----------EEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CCc----------eEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 100 1222222 2 4777788888889999998
No 150
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.30 E-value=0.42 Score=40.87 Aligned_cols=100 Identities=7% Similarity=0.115 Sum_probs=50.3
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+.+.+. +.....|..+|+.+.+-... +..+......+. -++.+++.++ .+..+.+|++.. .+.+..+
T Consensus 198 ~~~l~s-~s~D~~i~iWd~~~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s-~Dg~i~iWd~~~------~~~~~~~ 266 (304)
T 2ynn_A 198 KPYMIT-ASDDLTIKIWDYQTKSCVAT---LEGHMSNVSFAVFHPTLPIIISGS-EDGTLKIWNSST------YKVEKTL 266 (304)
T ss_dssp CCEEEE-EETTSEEEEEETTTTEEEEE---EECCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTT------CCEEEEE
T ss_pred CCEEEE-EcCCCeEEEEeCCCCcccee---eCCCCCCEEEEEECCCCCEEEEEc-CCCeEEEEECCC------Cceeeec
Confidence 334444 44567899999987653322 122222222222 2455555544 445589999854 3444444
Q ss_pred chhhhhhhcCCCCCCCceEEE--ecCCEEEEEEcCCccEEEEEcc
Q 046684 287 PIEMGMRLSGGKASWGGTRCA--AGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
...... ...+. ..++..++..+..+.+.+++..
T Consensus 267 ~~~~~~----------~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 267 NVGLER----------SWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp CCSSSS----------EEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred cCCCcc----------EEEEEECCCCCceEEEEecCCceEEEEec
Confidence 322110 12222 2244555555555677777776
No 151
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.30 E-value=1.7 Score=42.78 Aligned_cols=193 Identities=10% Similarity=0.030 Sum_probs=98.8
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|.|++... ..-+.++|+.+++++..............++..+. + +.|++ |... ..+.
T Consensus 373 ~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~---~-----g~lWi-gt~~----------~Gl~ 430 (781)
T 3v9f_A 373 QGKLWIGTD---GGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS---E-----GNLWF-GTYL----------GNIS 430 (781)
T ss_dssp TSCEEEEEB---SSCEEEEETTEEEEECC-----CCCSBEEEEEECT---T-----SCEEE-EETT----------EEEE
T ss_pred CCCEEEEeC---CCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC---C-----CCEEE-Eecc----------CCEE
Confidence 477887652 23488999999887765321111111122333321 1 56776 3221 3588
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCC-C---CCCcee
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMA-D---RLEFAT 247 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p-~---~~~~~~ 247 (373)
.||..+++++...... ... ........ +|.+++. .. ..+..||+.+++|.... ..+ . ......
T Consensus 431 ~~~~~~~~~~~~~~~~------~~~-~~v~~i~~d~~g~lwig-t~--~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 431 YYNTRLKKFQIIELEK------NEL-LDVRVFYEDKNKKIWIG-TH--AGVFVIDLASKKVIHHY-DTSNSQLLENFVRS 499 (781)
T ss_dssp EECSSSCEEEECCSTT------TCC-CCEEEEEECTTSEEEEE-ET--TEEEEEESSSSSCCEEE-CTTTSSCSCSCEEE
T ss_pred EEcCCCCcEEEeccCC------CCC-CeEEEEEECCCCCEEEE-EC--CceEEEeCCCCeEEecc-cCcccccccceeEE
Confidence 9999999888765310 000 11111223 4666654 33 67999999999887662 221 1 111122
Q ss_pred EEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe-cCCEEEEEEcCCccE-E
Q 046684 248 LVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA-GNGAICLYREVGLGM-I 324 (373)
Q Consensus 248 ~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~ 324 (373)
+.. .+|.|++... +..+..++. ++++++.... +... ... ....+.. .++.|++... ..+ .
T Consensus 500 i~~d~~g~lWigt~--~~Gl~~~~~----~~~~~~~~~~-~~~l----~~~----~i~~i~~d~~g~lWi~T~--~Glv~ 562 (781)
T 3v9f_A 500 IAQDSEGRFWIGTF--GGGVGIYTP----DMQLVRKFNQ-YEGF----CSN----TINQIYRSSKGQMWLATG--EGLVC 562 (781)
T ss_dssp EEECTTCCEEEEES--SSCEEEECT----TCCEEEEECT-TTTC----SCS----CEEEEEECTTSCEEEEET--TEEEE
T ss_pred EEEcCCCCEEEEEc--CCCEEEEeC----CCCeEEEccC-CCCC----CCC----eeEEEEECCCCCEEEEEC--CCceE
Confidence 222 3677777542 122344444 3466665432 1100 000 0122333 4678888554 356 8
Q ss_pred EEEccccCCcccEEEe
Q 046684 325 IWREDEDKRKWEWVWV 340 (373)
Q Consensus 325 ~yd~~~~~~~~~W~~~ 340 (373)
.||++ ++ +++..
T Consensus 563 ~~d~~--~~--~~~~~ 574 (781)
T 3v9f_A 563 FPSAR--NF--DYQVF 574 (781)
T ss_dssp ESCTT--TC--CCEEE
T ss_pred EECCC--CC--cEEEc
Confidence 99999 88 66655
No 152
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.19 E-value=1.4 Score=38.06 Aligned_cols=174 Identities=11% Similarity=0.021 Sum_probs=89.3
Q ss_pred eEEEEEcCcccceecc-CCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCC----Cc
Q 046684 107 LQLVLCNPFTRQFRYL-PLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRH----DA 181 (373)
Q Consensus 107 ~~~~v~np~t~~w~~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~----~~ 181 (373)
..+...|+.+++...+ +.+. . ..++..+.. + ++||+.... ...+.+++..+ ..
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~----~-p~g~~~d~~--~-----~~ly~~D~~----------~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLR----N-VVALDTEVA--S-----NRIYWSDLS----------QRMICSTQLDRAHGVSS 67 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCS----S-EEEEEEETT--T-----TEEEEEETT----------TTEEEEEEC--------
T ss_pred CeEEEEECCCcceEehhcCCC----c-eEEEEEEeC--C-----CEEEEEECC----------CCcEEEEECCCCCCCcc
Confidence 5678888888776554 3221 1 122222211 1 678887533 24688888765 22
Q ss_pred eeeecCCCccccccceeccCCceEE--ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEE
Q 046684 182 WQIIGSMPVEFAVRLTVWTPNESVC--TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTL 257 (373)
Q Consensus 182 W~~~~~~p~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~ 257 (373)
-+.+.... .......++ .++.|||.. .....|.++|+....-..+ ...... .-.++++ .+|.||+
T Consensus 68 ~~~~~~~~--------~~~p~glavd~~~~~ly~~d-~~~~~I~~~~~~g~~~~~~-~~~~~~-~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 68 YDTVISRD--------IQAPDGLAVDWIHSNIYWTD-SVLGTVSVADTKGVKRKTL-FRENGS-KPRAIVVDPVHGFMYW 136 (316)
T ss_dssp CEEEECSS--------CSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSSSEEEE-EECTTC-CEEEEEEETTTTEEEE
T ss_pred cEEEEeCC--------CCCcCEEEEeecCCeEEEEE-CCCCEEEEEeCCCCceEEE-EECCCC-CcceEEeCCCCCEEEE
Confidence 22221100 011123344 368999984 4467899999987654444 221111 1123444 3788998
Q ss_pred EEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 258 IGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 258 ~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
....... .|+..+. +...=+.+... .. ..+..++. .++.||+.+.....|..+|++
T Consensus 137 ~d~~~~~--~I~~~~~--dG~~~~~~~~~--~~----------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 137 TDWGTPA--KIKKGGL--NGVDIYSLVTE--NI----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EECSSSC--EEEEEET--TSCCEEEEECS--SC----------SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EccCCCC--eEEEEcC--CCCCeEEEEEC--CC----------CCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 8632212 4555543 22222222111 10 01333444 478999999887889999998
No 153
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.16 E-value=1.4 Score=38.05 Aligned_cols=190 Identities=7% Similarity=-0.028 Sum_probs=89.7
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc--eee
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA--WQI 184 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~--W~~ 184 (373)
..+.++|+.+++....-.. .....+....+. + + +++|+..... ..+.+||...+. -..
T Consensus 69 ~~i~~~d~~~g~~~~~~~~-~~~~~p~gia~d-~---~-----g~l~v~d~~~----------~~v~~~~~~g~~~~~~~ 128 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK-NLFYLPHGLSID-T---D-----GNYWVTDVAL----------HQVFKLDPHSKEGPLLI 128 (329)
T ss_dssp CCEEEECTTTCCEEEEECT-TTCSSEEEEEEC-T---T-----SCEEEEETTT----------TEEEEECTTCSSCCSEE
T ss_pred CcEEEEECCCCeEEeccCC-CccCCceEEEEC-C---C-----CCEEEEECCC----------CEEEEEeCCCCeEEEEE
Confidence 3689999988876432110 111112222222 1 1 6688875332 468889886542 122
Q ss_pred ecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCC------CCCCC-ceeEEEE-C-C
Q 046684 185 IGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPM------ADRLE-FATLVSR-N-Q 253 (373)
Q Consensus 185 ~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~------p~~~~-~~~~~~~-~-g 253 (373)
+......-...........+++- +|.+|+..+.....|..||+....-..+...- +.... -.+++.. + |
T Consensus 129 ~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g 208 (329)
T 3fvz_A 129 LGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD 208 (329)
T ss_dssp ESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT
T ss_pred ecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC
Confidence 22110000000000111223333 58999985335788999996655444441111 11111 1234443 4 7
Q ss_pred EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEc-------CCccEEEE
Q 046684 254 KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYRE-------VGLGMIIW 326 (373)
Q Consensus 254 ~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~y 326 (373)
.||+.... ...+.+|+++. .+... .+...... .....+....+.++...+ ....+.++
T Consensus 209 ~l~v~d~~-~~~I~~~~~~~----G~~~~--~~~~~~~~--------~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 209 QLCVADRE-NGRIQCFKTDT----KEFVR--EIKHASFG--------RNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp EEEEEETT-TTEEEEEETTT----CCEEE--EECCTTTT--------TCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE
T ss_pred EEEEEECC-CCEEEEEECCC----CcEEE--EEeccccC--------CCcceeeecCCEEEEeCCCEEeccCCCcEEEEE
Confidence 88888643 33467777653 44333 33211110 001222222355555443 33479999
Q ss_pred EccccCC
Q 046684 327 REDEDKR 333 (373)
Q Consensus 327 d~~~~~~ 333 (373)
|.. ++
T Consensus 274 ~~~--~g 278 (329)
T 3fvz_A 274 NFS--SG 278 (329)
T ss_dssp ETT--TC
T ss_pred EcC--CC
Confidence 988 77
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.15 E-value=1.4 Score=37.97 Aligned_cols=189 Identities=9% Similarity=0.023 Sum_probs=87.4
Q ss_pred ceEEEEEcCcccc--eeccCCCCCCCCCCeEEEE-EcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCce
Q 046684 106 ILQLVLCNPFTRQ--FRYLPLLNVSRTNPAVGIV-MEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAW 182 (373)
Q Consensus 106 ~~~~~v~np~t~~--w~~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W 182 (373)
...+.+||..+++ ...+.............+. ......+ +++++.|+.+ ..+.+||..++.=
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~l~~~~~d----------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE-----ERVVCAGYDN----------GDIKLFDLRNMAL 202 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C-----CCEEEEEETT----------SEEEEEETTTTEE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC-----CCEEEEEccC----------CeEEEEECccCce
Confidence 4679999998875 2333332221111112221 1111112 5666666553 4689999987663
Q ss_pred eeecCCCccccccceeccCCceEEE----CCEEEEEEcCCceEEEEEECCCCcEEeccc--CCCCCCCc-eeEEEE-CCE
Q 046684 183 QIIGSMPVEFAVRLTVWTPNESVCT----RGMLYWITSARAYSVIGFDIESNTWRELSA--PMADRLEF-ATLVSR-NQK 254 (373)
Q Consensus 183 ~~~~~~p~~~~~~~~~~~~~~~~~~----~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~--~~p~~~~~-~~~~~~-~g~ 254 (373)
....... .....+++. ++...+.+ .....+..||+.+++-...-. ........ ..+... ++.
T Consensus 203 ~~~~~~~---------~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 203 RWETNIK---------NGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp EEEEECS---------SCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred eeecCCC---------CceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 2221111 011112222 45555554 345678888886542111000 00011111 223333 455
Q ss_pred EEEEEeecCCceEEEEeecCCC-------------CCCeEEEEeechhhhhhhcCCCCCCCceEEE-ecCC-EEEEEEcC
Q 046684 255 LTLIGGTCGGDACVWELSEGGD-------------DDIWCLIEKVPIEMGMRLSGGKASWGGTRCA-AGNG-AICLYREV 319 (373)
Q Consensus 255 l~~~gg~~~~~~~i~~~~~~~~-------------~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~-~~~~-~i~~~~~~ 319 (373)
-+++.+..+..+.+|+++.... ...+..+..+...... ...+. ..++ .|++.++.
T Consensus 273 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~l~~s~~~ 342 (357)
T 3i2n_A 273 ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP----------ISSLDWSPDKRGLCVCSSF 342 (357)
T ss_dssp EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC----------EEEEEECSSSTTEEEEEET
T ss_pred cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCC----------eeEEEEcCCCCeEEEEecC
Confidence 3444444555689999975100 0123444443321100 12222 2234 44446777
Q ss_pred CccEEEEEcc
Q 046684 320 GLGMIIWRED 329 (373)
Q Consensus 320 ~~~~~~yd~~ 329 (373)
.+.+.+||..
T Consensus 343 d~~i~iw~~~ 352 (357)
T 3i2n_A 343 DQTVRVLIVT 352 (357)
T ss_dssp TSEEEEEEEC
T ss_pred CCcEEEEECC
Confidence 7789999987
No 155
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.15 E-value=1.8 Score=39.18 Aligned_cols=73 Identities=8% Similarity=0.052 Sum_probs=46.4
Q ss_pred CCEEEEEEeecC------CceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC-EEEEEEcCCccEE
Q 046684 252 NQKLTLIGGTCG------GDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG-AICLYREVGLGMI 324 (373)
Q Consensus 252 ~g~l~~~gg~~~------~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~ 324 (373)
+++||+...... ..-.++.++. .+++.+..++.+.... ...+...+. .+|+.+..++.+.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~~P~---------gia~spDg~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGHEID---------SINVSQDAEPLLYALSAGTQTLH 396 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEEEEC---------EEEECCSSSCEEEEEETTTTEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCCCcC---------eEEEccCCCEEEEEEcCCCCeEE
Confidence 478898864321 1236777766 7788888887654221 233333455 6887776778999
Q ss_pred EEEccccCCcccEEEeccc
Q 046684 325 IWREDEDKRKWEWVWVGGC 343 (373)
Q Consensus 325 ~yd~~~~~~~~~W~~~~~~ 343 (373)
++|.+ +. +.+...
T Consensus 397 VID~~--t~----kvv~tI 409 (426)
T 3c75_H 397 IYDAA--TG----EELRSV 409 (426)
T ss_dssp EEETT--TC----CEEEEE
T ss_pred EEECC--CC----CEEEEe
Confidence 99999 55 555443
No 156
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.12 E-value=0.53 Score=42.05 Aligned_cols=175 Identities=8% Similarity=-0.001 Sum_probs=92.6
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeec
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIG 186 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 186 (373)
..+...++.+++...+..- ... ..++..+.. + ++||..-.. ...++.++..++..+.+.
T Consensus 96 ~~I~~i~~~~~~~~~~~~~---~~~-~~gl~~d~~--~-----~~ly~~D~~----------~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN---LEN-AIALDFHHR--R-----ELVFWSDVT----------LDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCEEEECTTSCCCEEEECS---CSC-EEEEEEETT--T-----TEEEEEETT----------TTEEEEEETTSCCEEEEE
T ss_pred ccceeeccCCCcEEEEecC---CCc-cEEEEEecC--C-----CeEEEEeCC----------CCcEEEEecCCCCcEEEE
Confidence 5678888877666543221 111 222222211 1 778887422 246888988877655443
Q ss_pred CCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeec
Q 046684 187 SMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTC 262 (373)
Q Consensus 187 ~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~ 262 (373)
... .......++- ++.|||.. .....|.++++....-..+ ...... .-.++++- +|.||+.....
T Consensus 155 ~~~--------~~~p~glavd~~~g~lY~~d-~~~~~I~~~~~dg~~~~~l-~~~~l~-~P~giavdp~~g~ly~td~~~ 223 (386)
T 3v65_B 155 STG--------LESPGGLAVDWVHDKLYWTD-SGTSRIEVANLDGAHRKVL-LWQSLE-KPRAIALHPMEGTIYWTDWGN 223 (386)
T ss_dssp CSS--------CSCCCCEEEETTTTEEEEEE-TTTTEEEECBTTSCSCEEE-ECSSCS-CEEEEEEETTTTEEEEEECSS
T ss_pred eCC--------CCCccEEEEEeCCCeEEEEc-CCCCeEEEEeCCCCceEEe-ecCCCC-CCcEEEEEcCCCeEEEeccCC
Confidence 211 0011223333 68999994 4456899999876544433 221111 11234443 68899876432
Q ss_pred CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 263 GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 263 ~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.. .|+..+. +...=+.+.. ... ..+..++. .++.||+.+.....|..+|++
T Consensus 224 ~~--~I~r~~~--dG~~~~~~~~--~~~----------~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 224 TP--RIEASSM--DGSGRRIIAD--THL----------FWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SC--EEEEEET--TSCSCEEEEC--SSC----------SCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CC--EEEEEeC--CCCCcEEEEE--CCC----------CCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 12 4555554 2222222211 110 01233333 588999998887889999987
No 157
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.03 E-value=0.26 Score=48.47 Aligned_cols=172 Identities=15% Similarity=0.180 Sum_probs=89.7
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--C--CEEEEEEcCCceEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--R--GMLYWITSARAYSVIGF 225 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~--g~ly~~gg~~~~~i~~y 225 (373)
++.++.|+.+ ..+.+||..+++++.+..+.. .......+.+ + |.+.+.+ ...+.|..+
T Consensus 21 g~~latg~~d----------g~I~vwd~~~~~~~~~~~l~~-------h~~~V~~l~~s~~~~~~~l~s~-s~Dg~I~vw 82 (753)
T 3jro_A 21 GKRLATCSSD----------KTIKIFEVEGETHKLIDTLTG-------HEGPVWRVDWAHPKFGTILASC-SYDGKVLIW 82 (753)
T ss_dssp SCCEEEEETT----------TEEEEEEEETTEEEEEEEECC-------CSSCEEEEEECCTTSCSEEEEE-ETTSCEEEE
T ss_pred CCeEEEEECC----------CcEEEEecCCCCCccceeccC-------CcCceEEEEecCCCCCCEEEEE-eCCCeEEEE
Confidence 5556666554 468889888777766544421 0111112222 2 5555553 446779999
Q ss_pred ECCCCcEEecccCCCCCCCceeEEEE--C--CEEEEEEeecCCceEEEEeecCCCCCC-eEEEEeechhhhhhhcCCCCC
Q 046684 226 DIESNTWRELSAPMADRLEFATLVSR--N--QKLTLIGGTCGGDACVWELSEGGDDDI-WCLIEKVPIEMGMRLSGGKAS 300 (373)
Q Consensus 226 d~~~~~w~~~~~~~p~~~~~~~~~~~--~--g~l~~~gg~~~~~~~i~~~~~~~~~~~-W~~v~~~p~~~~~~~~~~~~~ 300 (373)
|+.++++..+ ............+.. + +.+++.++ .+..+.+|++.. .... -..+...+...
T Consensus 83 d~~~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~l~sgs-~dg~I~vwdl~~--~~~~~~~~~~~~~~~v---------- 148 (753)
T 3jro_A 83 KEENGRWSQI-AVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKE--NGTTSPIIIDAHAIGV---------- 148 (753)
T ss_dssp EEETTEEEEE-EEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCS--SSCCCCEEEECCSSCE----------
T ss_pred ECCCCccccc-ccccCCCCCeEEEEECCCCCCCEEEEEe-CCCcEEEEEeec--CCCcceeEeecCCCce----------
Confidence 9999887666 333333333333333 3 56666665 444589999976 2111 11111111111
Q ss_pred CCceEEEec--------------CCEEEEEEcCCccEEEEEccccCCcccEEEecccccCCCCcccccceeEEEeccc
Q 046684 301 WGGTRCAAG--------------NGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCCLTGGKQVQNVPMRGVLLHPS 364 (373)
Q Consensus 301 ~~~~~~~~~--------------~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~p~ 364 (373)
..+... ++.+++.++..+.+.+||.+ ++...+..+.. +.++.. ....+.|.|.
T Consensus 149 ---~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~--~~~~~~~~~~~--~~~h~~----~V~~l~~sp~ 215 (753)
T 3jro_A 149 ---NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN--SDAQTYVLEST--LEGHSD----WVRDVAWSPT 215 (753)
T ss_dssp ---EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE--TTTTEEEEEEE--ECCCSS----CEEEEEECCC
T ss_pred ---EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc--CCcccceeeee--ecCCCC----cEEEEEeccC
Confidence 111111 35677777777889999998 65324544332 222222 3445566665
No 158
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.96 E-value=1.5 Score=37.21 Aligned_cols=196 Identities=8% Similarity=-0.007 Sum_probs=98.0
Q ss_pred eCcEEEEe-------eCCCCceEEEEEcCcccceeccCCCC-CCCCCCeEEEEEcCCCCCCCCCc-eEEEEEeccCCCCC
Q 046684 93 IGSFLLLR-------PINSTILQLVLCNPFTRQFRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPN-FRIYVAGGMSDEPR 163 (373)
Q Consensus 93 ~~g~l~~~-------gg~~~~~~~~v~np~t~~w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~-~kl~~~gg~~~~~~ 163 (373)
.+|.+|+. +. ....+.+||+.+++++.+.... .........+..++ + +++|+....
T Consensus 27 ~~g~l~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~--------~~g~l~v~~~~----- 91 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGK--PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR--------DANQLFVADMR----- 91 (314)
T ss_dssp TTSCEEEEETTCEETTE--ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS--------SSSEEEEEETT-----
T ss_pred CCCCEEEEEeccccCCC--CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec--------CCCcEEEEECC-----
Confidence 46777776 22 1457999999998876553210 00001112222221 2 567876521
Q ss_pred CCCcccceEEEEECCCCceeee-cCCCccccccceeccCCceEE-ECCEEEEEEcCC--------------ceEEEEEEC
Q 046684 164 GGATYESMVEMYDSRHDAWQII-GSMPVEFAVRLTVWTPNESVC-TRGMLYWITSAR--------------AYSVIGFDI 227 (373)
Q Consensus 164 ~~~~~~~~~~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~--------------~~~i~~yd~ 227 (373)
..+.+||.. ++.+.+ ...+.. ........++. -+|.+|+..... ...++.||+
T Consensus 92 ------~~l~~~d~~-g~~~~~~~~~~~~----~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 92 ------LGLLVVQTD-GTFEEIAKKDSEG----RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp ------TEEEEEETT-SCEEECCSBCTTS----CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred ------CCEEEEeCC-CCEEEEEeccCCC----ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 258899988 776655 322110 00111122222 257888775322 268999998
Q ss_pred CCCcEEecccCCCCCCCceeEEEE-----CC-EEEEEEeecCCceEEEEeecCCCCCCeEEE---EeechhhhhhhcCCC
Q 046684 228 ESNTWRELSAPMADRLEFATLVSR-----NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLI---EKVPIEMGMRLSGGK 298 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~-----~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v---~~~p~~~~~~~~~~~ 298 (373)
. ++...+..... ....++.. +| .||+... ....+.+|+++. +.+.... ..++.....
T Consensus 161 ~-g~~~~~~~~~~---~~~~i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~---~g~~~~~~~~~~~~~~~~~------ 226 (314)
T 1pjx_A 161 D-GQMIQVDTAFQ---FPNGIAVRHMNDGRPYQLIVAET-PTKKLWSYDIKG---PAKIENKKVWGHIPGTHEG------ 226 (314)
T ss_dssp T-SCEEEEEEEES---SEEEEEEEECTTSCEEEEEEEET-TTTEEEEEEEEE---TTEEEEEEEEEECCCCSSC------
T ss_pred C-CCEEEeccCCC---CcceEEEecccCCCCCEEEEEEC-CCCeEEEEECCC---CCccccceEEEECCCCCCC------
Confidence 7 66554411111 11233333 34 4566542 333466777652 1333322 222211000
Q ss_pred CCCCceE-EEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 299 ASWGGTR-CAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 299 ~~~~~~~-~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+.. +...++.||+.....+.+.+||++ ++
T Consensus 227 ---~p~~i~~d~~G~l~v~~~~~~~i~~~d~~--~g 257 (314)
T 1pjx_A 227 ---GADGMDFDEDNNLLVANWGSSHIEVFGPD--GG 257 (314)
T ss_dssp ---EEEEEEEBTTCCEEEEEETTTEEEEECTT--CB
T ss_pred ---CCCceEECCCCCEEEEEcCCCEEEEEcCC--CC
Confidence 0222 333467899887666689999998 66
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.89 E-value=2.9 Score=40.30 Aligned_cols=152 Identities=11% Similarity=0.046 Sum_probs=72.9
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceE-EEEEeccCCCCCCCCcccceEEEEECCCC-cee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFR-IYVAGGMSDEPRGGATYESMVEMYDSRHD-AWQ 183 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~k-l~~~gg~~~~~~~~~~~~~~~~~yd~~~~-~W~ 183 (373)
...++++|..+++...+........ ....+...+. ++ |++.. .+ .......+.++|..++ ..+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~spd--------g~~l~~~~-~~-----~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK-FLTNLSWSPD--------ENILYVAE-VN-----RAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC-EEEEEEECTT--------SSEEEEEE-EC-----TTSCEEEEEEEETTTCCEEE
T ss_pred eeEEEEEECCCCceEeeccCCCCce-eEeeEEEECC--------CCEEEEEE-eC-----CCCCeeEEEEEECCCCceee
Confidence 4679999999987665543211111 1111222111 44 44433 32 2233467899999888 666
Q ss_pred eecCCCccccccceec-cCCceEE-E--CCEEEEEEcC-CceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CC-EE
Q 046684 184 IIGSMPVEFAVRLTVW-TPNESVC-T--RGMLYWITSA-RAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQ-KL 255 (373)
Q Consensus 184 ~~~~~p~~~~~~~~~~-~~~~~~~-~--~g~ly~~gg~-~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g-~l 255 (373)
.+..... .... ....+++ - +|++.+.+.. ....++.+|...+....+ .... ......... +| .|
T Consensus 299 ~~~~~~~-----~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l-~~~~--~~v~~~~~~spdg~~l 370 (706)
T 2z3z_A 299 TLFVETD-----KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV-TKGE--WEVTNFAGFDPKGTRL 370 (706)
T ss_dssp EEEEEEC-----SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC-CCSS--SCEEEEEEECTTSSEE
T ss_pred EEEEccC-----CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec-CCCC--eEEEeeeEEcCCCCEE
Confidence 5532100 0000 0012233 2 6776655422 245788888777777666 2211 111111222 44 45
Q ss_pred EEEEeecCC-ceEEEEeecCCCCCCeEE
Q 046684 256 TLIGGTCGG-DACVWELSEGGDDDIWCL 282 (373)
Q Consensus 256 ~~~gg~~~~-~~~i~~~~~~~~~~~W~~ 282 (373)
++.+..... ...+|..+. ++...+.
T Consensus 371 ~~~~~~~~~~~~~l~~~d~--~~~~~~~ 396 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDI--KGGKTKD 396 (706)
T ss_dssp EEEESSSCTTCBEEEEEET--TCCCCEE
T ss_pred EEEecCCCCceEEEEEEEc--CCCCcee
Confidence 555543321 256777765 3444333
No 160
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.80 E-value=0.9 Score=39.99 Aligned_cols=144 Identities=7% Similarity=-0.048 Sum_probs=74.4
Q ss_pred EEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECC
Q 046684 151 RIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 151 kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~ 228 (373)
++++.|+.+ ..+.+||..++.......... ....-..+++. ++.+.+. +.....|..+|+.
T Consensus 87 ~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~l~s-~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 87 TTVAVGSKG----------GDIILWDYDVQNKTSFIQGMG------PGDAITGMKFNQFNTNQLFV-SSIRGATTLRDFS 149 (383)
T ss_dssp TEEEEEEBT----------SCEEEEETTSTTCEEEECCCS------TTCBEEEEEEETTEEEEEEE-EETTTEEEEEETT
T ss_pred CEEEEEcCC----------CeEEEEeCCCcccceeeecCC------cCCceeEEEeCCCCCCEEEE-EeCCCEEEEEECC
Confidence 466666554 368999998877654433210 00011122333 2344444 3456789999999
Q ss_pred CCcEEecccCCCCCCC-ceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE
Q 046684 229 SNTWRELSAPMADRLE-FATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC 306 (373)
Q Consensus 229 ~~~w~~~~~~~p~~~~-~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 306 (373)
++....+ ........ ...+.. -++.+++.++ .+..+.+|++.. ..-..+..-.... ....
T Consensus 150 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~----~~~~~~~~h~~~v------------~~~~ 211 (383)
T 3ei3_B 150 GSVIQVF-AKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGLDG----HEIFKEKLHKAKV------------THAE 211 (383)
T ss_dssp SCEEEEE-ECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEETTS----CEEEEEECSSSCE------------EEEE
T ss_pred CCceEEE-eccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEECCC----CEEEEeccCCCcE------------EEEE
Confidence 8777666 22221111 122222 2566555554 445588999843 2222211111100 1222
Q ss_pred EecCCE-EEEEEcCCccEEEEEcc
Q 046684 307 AAGNGA-ICLYREVGLGMIIWRED 329 (373)
Q Consensus 307 ~~~~~~-i~~~~~~~~~~~~yd~~ 329 (373)
...++. +++.++.++.+.+||++
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGG
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCC
Confidence 223344 77778777789999998
No 161
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.80 E-value=0.85 Score=39.45 Aligned_cols=149 Identities=13% Similarity=0.111 Sum_probs=71.0
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-C--CEEEEEEcCCceEEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-R--GMLYWITSARAYSVIGFD 226 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~--g~ly~~gg~~~~~i~~yd 226 (373)
+++++.|+.+ ..+.+||..++.|+.+..+.. +.. .-..+.+. + +...+. +.....|..+|
T Consensus 165 ~~~l~s~s~D----------~~i~iW~~~~~~~~~~~~~~~-----h~~-~v~~~~~~~~~~~~~l~s-~s~D~~v~iw~ 227 (330)
T 2hes_X 165 EALLASSSYD----------DTVRIWKDYDDDWECVAVLNG-----HEG-TVWSSDFDKTEGVFRLCS-GSDDSTVRVWK 227 (330)
T ss_dssp SSEEEEEETT----------SCEEEEEEETTEEEEEEEECC-----CSS-CEEEEEECCSSSSCEEEE-EETTSCEEEEE
T ss_pred CCEEEEEcCC----------CeEEEEECCCCCeeEEEEccC-----CCC-cEEEEEecCCCCeeEEEE-EeCCCeEEEEE
Confidence 4566666554 357888887777765543310 000 00011121 1 223333 33455666677
Q ss_pred CCCC------cEEecccCCCC-CCCc-eeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCC
Q 046684 227 IESN------TWRELSAPMAD-RLEF-ATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGK 298 (373)
Q Consensus 227 ~~~~------~w~~~~~~~p~-~~~~-~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~ 298 (373)
+.++ .|... ..++. +... ..++...+.+++.++ .+..+.+|+... ..|..+.........
T Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~s~~~~l~s~~-~dg~v~iw~~~~----~~~~~~~~~~~~h~~------ 295 (330)
T 2hes_X 228 YMGDDEDDQQEWVCE-AILPDVHKRQVYNVAWGFNGLIASVG-ADGVLAVYEEVD----GEWKVFAKRALCHGV------ 295 (330)
T ss_dssp EEEECTTSCEEEEEE-EECCSCCSSCEEEEEECTTSCEEEEE-TTSCEEEEEEET----TEEEEEEEESCTTTT------
T ss_pred ecCCCccccceeEEe-eecccccccceEEEEEcCCCEEEEEe-CCCEEEEEEcCC----CceEEEecccccccc------
Confidence 6432 34443 22222 1111 222223444444444 444589999876 778766543211100
Q ss_pred CCCCceEEEe-c--CCEEEEEEcCCccEEEEEcc
Q 046684 299 ASWGGTRCAA-G--NGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 299 ~~~~~~~~~~-~--~~~i~~~~~~~~~~~~yd~~ 329 (373)
.....+.. . ++.+++.++.++.+.+||++
T Consensus 296 --~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 296 --YEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp --SCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred --ceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 00112222 2 46677778888889999987
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.79 E-value=1.6 Score=36.82 Aligned_cols=219 Identities=7% Similarity=-0.088 Sum_probs=107.5
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEE-eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCC--CCCCeEEEEEc
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVS-SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVS--RTNPAVGIVME 139 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~--~~~~~~~~~~~ 139 (373)
..++.||+.++ ...+..+. ....+++ ..+|.+++.... ...+.++|+.+++.+.+...... ...+......
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~--~~~~~l~~~~dg~l~v~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d- 123 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPS--HHQNGHCLNKQGHLIACSHG--LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLA- 123 (296)
T ss_dssp TEEEEEETTSC-EEEEESSC--SSEEEEEECTTCCEEEEETT--TTEEEEECSTTCCEEEEECEETTEECCCCCCEEEC-
T ss_pred CEEEEEECCCC-eEEEECCC--CCcceeeECCCCcEEEEecC--CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC-
Confidence 46777888876 44443221 1112233 346777776542 36799999999887665322111 1111112222
Q ss_pred CCCCCCCCCceEEEEE----eccCCC---CCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCE
Q 046684 140 GPAQHGPFPNFRIYVA----GGMSDE---PRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGM 210 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~----gg~~~~---~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ 210 (373)
+ ++++|+. |..... ..........++.++.. ++-+.+.... .....+.+ +|.
T Consensus 124 ~--------~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----------~~~~gi~~s~dg~ 184 (296)
T 3e5z_A 124 P--------DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----------VKPNGLAFLPSGN 184 (296)
T ss_dssp T--------TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----------SSEEEEEECTTSC
T ss_pred C--------CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----------CCCccEEECCCCC
Confidence 1 1778886 321100 00001112478888886 5544432210 11112223 577
Q ss_pred EEEEEcCCceEEEEEECC-CCcE---EecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 211 LYWITSARAYSVIGFDIE-SNTW---RELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~-~~~w---~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
+++. ......|..||+. +++. ..+ ....... -.+++. -+|.||+.. ...+.+|+++. +.-.. ..
T Consensus 185 ~lv~-~~~~~~i~~~~~~~~g~~~~~~~~-~~~~~~~-p~~i~~d~~G~l~v~~---~~~v~~~~~~g----~~~~~-~~ 253 (296)
T 3e5z_A 185 LLVS-DTGDNATHRYCLNARGETEYQGVH-FTVEPGK-TDGLRVDAGGLIWASA---GDGVHVLTPDG----DELGR-VL 253 (296)
T ss_dssp EEEE-ETTTTEEEEEEECSSSCEEEEEEE-ECCSSSC-CCSEEEBTTSCEEEEE---TTEEEEECTTS----CEEEE-EE
T ss_pred EEEE-eCCCCeEEEEEECCCCcCcCCCeE-eeCCCCC-CCeEEECCCCCEEEEc---CCeEEEECCCC----CEEEE-EE
Confidence 6644 4556789999986 5555 222 1111111 113333 478888876 33456666532 32222 22
Q ss_pred echhhhhhhcCCCCCCCceEEE-e-cCCEEEEEEcCCccEEEEEccccCC
Q 046684 286 VPIEMGMRLSGGKASWGGTRCA-A-GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+.. . ...++ . .++.||+... ..++.++++ ++
T Consensus 254 ~~~~--~----------~~~~f~~~d~~~L~v~t~--~~l~~~~~~--~~ 287 (296)
T 3e5z_A 254 TPQT--T----------SNLCFGGPEGRTLYMTVS--TEFWSIETN--VR 287 (296)
T ss_dssp CSSC--C----------CEEEEESTTSCEEEEEET--TEEEEEECS--CC
T ss_pred CCCC--c----------eeEEEECCCCCEEEEEcC--CeEEEEEcc--cc
Confidence 3322 1 12233 2 2457888654 379999998 77
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.74 E-value=3 Score=40.27 Aligned_cols=147 Identities=8% Similarity=-0.062 Sum_probs=71.9
Q ss_pred cceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCE-EEEEEc---CCceEEEEEECCCC-cEEecccCCCCC
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGM-LYWITS---ARAYSVIGFDIESN-TWRELSAPMADR 242 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~-ly~~gg---~~~~~i~~yd~~~~-~w~~~~~~~p~~ 242 (373)
...++++|..+++-+.+..... . ......+++ -+|+ +++... .....+..+|+.++ +...+ ......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~-----~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEP-----K-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL-FVETDK 306 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSC-----T-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE-EEEECS
T ss_pred eeEEEEEECCCCceEeeccCCC-----C-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE-EEccCC
Confidence 4578999998877554432210 0 000011122 2555 555431 12358999999988 66655 221111
Q ss_pred C----CceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCc-eEEEecCCEEEE
Q 046684 243 L----EFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGG-TRCAAGNGAICL 315 (373)
Q Consensus 243 ~----~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 315 (373)
. .......- +|++++.+. .+....+|.++. +......+ ...... ... ......++.|++
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~-~~g~~~l~~~~~--~~~~~~~l---~~~~~~--------v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSR-RDGWNHLYLYDT--TGRLIRQV---TKGEWE--------VTNFAGFDPKGTRLYF 372 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEEC-TTSSCEEEEEET--TSCEEEEC---CCSSSC--------EEEEEEECTTSSEEEE
T ss_pred CeECccCCceeecCCCCEEEEEEc-cCCccEEEEEEC--CCCEEEec---CCCCeE--------EEeeeEEcCCCCEEEE
Confidence 1 01112233 777555543 333468998874 33333332 221110 001 122233567777
Q ss_pred EEcCCc----cEEEEEccccCCcccEEEe
Q 046684 316 YREVGL----GMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 316 ~~~~~~----~~~~yd~~~~~~~~~W~~~ 340 (373)
.+.... .++.+|.+ ++ +.+.+
T Consensus 373 ~~~~~~~~~~~l~~~d~~--~~--~~~~l 397 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIK--GG--KTKDL 397 (706)
T ss_dssp EESSSCTTCBEEEEEETT--CC--CCEES
T ss_pred EecCCCCceEEEEEEEcC--CC--Cceec
Confidence 765543 67778887 77 54444
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.74 E-value=1.9 Score=37.29 Aligned_cols=62 Identities=5% Similarity=0.136 Sum_probs=31.9
Q ss_pred CCEEEEEEcCCceEEEEEECCC-CcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIES-NTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~-~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
++...+.+ .....|..||+.+ .+-... ..... ..-..+... ++.+++.++ .+..+.+|++..
T Consensus 186 ~~~~l~~~-~~dg~i~i~d~~~~~~~~~~-~~~~~-~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~ 249 (369)
T 3zwl_B 186 KGKYIIAG-HKDGKISKYDVSNNYEYVDS-IDLHE-KSISDMQFSPDLTYFITSS-RDTNSFLVDVST 249 (369)
T ss_dssp GGCEEEEE-ETTSEEEEEETTTTTEEEEE-EECCS-SCEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred CCCEEEEE-cCCCEEEEEECCCCcEeEEE-EecCC-CceeEEEECCCCCEEEEec-CCceEEEEECCC
Confidence 35555553 4567899999987 332222 11111 111122222 566555554 444578998865
No 165
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.73 E-value=1.6 Score=36.37 Aligned_cols=146 Identities=8% Similarity=-0.035 Sum_probs=77.8
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~ 227 (373)
++||+.... ...+.+|+..++.-+.+.... .......++- ++.+|+.. .....|..+|+
T Consensus 48 ~~ly~~d~~----------~~~I~~~~~~g~~~~~~~~~~--------~~~p~~ia~d~~~~~lyv~d-~~~~~I~~~~~ 108 (267)
T 1npe_A 48 KVVYWTDIS----------EPSIGRASLHGGEPTTIIRQD--------LGSPEGIALDHLGRTIFWTD-SQLDRIEVAKM 108 (267)
T ss_dssp TEEEEEETT----------TTEEEEEESSSCCCEEEECTT--------CCCEEEEEEETTTTEEEEEE-TTTTEEEEEET
T ss_pred CEEEEEECC----------CCEEEEEecCCCCcEEEEECC--------CCCccEEEEEecCCeEEEEE-CCCCEEEEEEc
Confidence 678887532 246888998765433222110 0011223333 57899984 44678999998
Q ss_pred CCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceE
Q 046684 228 ESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTR 305 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 305 (373)
....-..+ .+.... .-.+++.. +|.||+........ .|+.++. +...-+.+.... . . .+..
T Consensus 109 ~g~~~~~~-~~~~~~-~P~~i~vd~~~g~lyv~~~~~~~~-~I~~~~~--dg~~~~~~~~~~--~-~---------~P~g 171 (267)
T 1npe_A 109 DGTQRRVL-FDTGLV-NPRGIVTDPVRGNLYWTDWNRDNP-KIETSHM--DGTNRRILAQDN--L-G---------LPNG 171 (267)
T ss_dssp TSCSCEEE-ECSSCS-SEEEEEEETTTTEEEEEECCSSSC-EEEEEET--TSCCCEEEECTT--C-S---------CEEE
T ss_pred CCCCEEEE-EECCCC-CccEEEEeeCCCEEEEEECCCCCc-EEEEEec--CCCCcEEEEECC--C-C---------CCcE
Confidence 76543333 221111 11234443 68899987432122 3444433 212222222111 0 0 1233
Q ss_pred EEe--cCCEEEEEEcCCccEEEEEccccCC
Q 046684 306 CAA--GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 306 ~~~--~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
++. .++.||+.+...+.|.++|++ ..
T Consensus 172 ia~d~~~~~lyv~d~~~~~I~~~~~~--g~ 199 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTHRAECLNPA--QP 199 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--EE
T ss_pred EEEcCCCCEEEEEECCCCEEEEEecC--CC
Confidence 333 368999999888899999998 54
No 166
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.71 E-value=2.3 Score=38.22 Aligned_cols=211 Identities=9% Similarity=-0.008 Sum_probs=106.8
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
..+|.||+.... ...+.++|+.+++...+..... . ..+++ . +.+ ..+|+..... ...
T Consensus 139 d~~g~lyv~d~~--~~~I~~id~~~g~~~~~~~~~~--~-~~ia~-~-~~g-------~~l~~~d~~~---------~~~ 195 (409)
T 3hrp_A 139 VGNNTVLAYQRD--DPRVRLISVDDNKVTTVHPGFK--G-GKPAV-T-KDK-------QRVYSIGWEG---------THT 195 (409)
T ss_dssp CSTTEEEEEETT--TTEEEEEETTTTEEEEEEETCC--B-CBCEE-C-TTS-------SEEEEEBSST---------TCE
T ss_pred eCCCCEEEEecC--CCcEEEEECCCCEEEEeeccCC--C-CceeE-e-cCC-------CcEEEEecCC---------Cce
Confidence 457889998763 4689999999887665533211 1 11222 1 111 4566654322 127
Q ss_pred EEEEECCCCc-eeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEeccc--CCCCCCCc-
Q 046684 172 VEMYDSRHDA-WQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSA--PMADRLEF- 245 (373)
Q Consensus 172 ~~~yd~~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~--~~p~~~~~- 245 (373)
+++++..++. .+.+...+. ........+++. +|.||+. .....|..||+++.....+.. ........
T Consensus 196 I~~~d~~~~~~~~~~g~~~~-----~~~~~p~~iav~p~~g~lyv~--d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P 268 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGS-----TFSGKIGAVALDETEEWLYFV--DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNP 268 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCT-----TSCSCCCBCEECTTSSEEEEE--CTTCEEEEEETTTCCEEEEEECCCCSCCCCSS
T ss_pred EEEEEcCCCceeEEeeeccc-----hhcCCcEEEEEeCCCCeEEEE--ECCCcEEEEECCCCCEEEEecccccCCCCCCc
Confidence 8888886543 233311110 011122233443 6899995 335689999999876554411 11111112
Q ss_pred e-eEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeec-hhhhhh-hcCCCCCCCceEEEec-CCEEEEEEc-
Q 046684 246 A-TLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVP-IEMGMR-LSGGKASWGGTRCAAG-NGAICLYRE- 318 (373)
Q Consensus 246 ~-~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p-~~~~~~-~~~~~~~~~~~~~~~~-~~~i~~~~~- 318 (373)
. +++.. ++.||+..... . .|+.++. +.. -..+.... ...+.. .........+..++.. ++.||+.+.
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~-~--~I~~~~~--~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~ 342 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNL-S--SVYKITP--DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF 342 (409)
T ss_dssp CCEEEEETTTTEEEEEETTT-T--EEEEECT--TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT
T ss_pred cccEEEeCCCCEEEEEeCCC-C--EEEEEec--CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC
Confidence 1 45554 58899875322 2 4555544 222 22222211 000000 0000001113444443 667999988
Q ss_pred CCccEEEEEccccCCcccEEEecc
Q 046684 319 VGLGMIIWREDEDKRKWEWVWVGG 342 (373)
Q Consensus 319 ~~~~~~~yd~~~~~~~~~W~~~~~ 342 (373)
....|..+|+. ++ +-+.+.+
T Consensus 343 ~~~~I~~~~~~--~G--~v~~~~g 362 (409)
T 3hrp_A 343 KGYCLRKLDIL--DG--YVSTVAG 362 (409)
T ss_dssp TTCEEEEEETT--TT--EEEEEEE
T ss_pred CCCEEEEEECC--CC--EEEEEeC
Confidence 78899999977 77 5454433
No 167
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.71 E-value=1.7 Score=36.78 Aligned_cols=228 Identities=8% Similarity=-0.007 Sum_probs=109.5
Q ss_pred eeEEEEeCCCCCccccCCCC---CCCCceeEE-eeC-cEEEEeeCCCCceEEEEEcCcccceecc-CCCCCC--CCCCeE
Q 046684 63 LCCYVHNPVSDKWHVLSLDF---LPYPVRPVS-SIG-SFLLLRPINSTILQLVLCNPFTRQFRYL-PLLNVS--RTNPAV 134 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~---~~~~~~~~~-~~~-g~l~~~gg~~~~~~~~v~np~t~~w~~l-p~~~~~--~~~~~~ 134 (373)
..+..||+.+.++..+..+. .......++ ..+ |.+|+... ...++++|+. ++.+.+ ...... ......
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---TTEEEEEETT-SCEEECCSBCTTSCBCBCCCE
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---CCCEEEEeCC-CCEEEEEeccCCCccccCCcC
Confidence 46778998887776543210 111112233 345 88888775 2479999998 777655 322111 111122
Q ss_pred EEEEcCCCCCCCCCceEEEEEeccCC-CC----CCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--
Q 046684 135 GIVMEGPAQHGPFPNFRIYVAGGMSD-EP----RGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-- 207 (373)
Q Consensus 135 ~~~~~~~~~~~~~~~~kl~~~gg~~~-~~----~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-- 207 (373)
... ++ + +++|+...... .. .........++.||.. ++.+.+... .......++.
T Consensus 122 i~~-d~---~-----g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---------~~~~~~i~~~~~ 182 (314)
T 1pjx_A 122 CAF-DY---E-----GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA---------FQFPNGIAVRHM 182 (314)
T ss_dssp EEE-CT---T-----SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE---------ESSEEEEEEEEC
T ss_pred EEE-CC---C-----CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC---------CCCcceEEEecc
Confidence 222 21 1 66887643210 00 0011123468888876 554433210 0011122333
Q ss_pred ---CC-EEEEEEcCCceEEEEEECC-CCcEEecc--cCCCCC--CCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCC
Q 046684 208 ---RG-MLYWITSARAYSVIGFDIE-SNTWRELS--APMADR--LEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDD 277 (373)
Q Consensus 208 ---~g-~ly~~gg~~~~~i~~yd~~-~~~w~~~~--~~~p~~--~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~ 277 (373)
+| .+|+.. .....|..||++ +++..... ...+.. ..-..++. -+|.||+... ....+.+|+++.
T Consensus 183 ~d~dg~~l~v~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-~~~~i~~~d~~~---- 256 (314)
T 1pjx_A 183 NDGRPYQLIVAE-TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW-GSSHIEVFGPDG---- 256 (314)
T ss_dssp TTSCEEEEEEEE-TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE-TTTEEEEECTTC----
T ss_pred cCCCCCEEEEEE-CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc-CCCEEEEEcCCC----
Confidence 34 467663 445789999976 44432110 112211 11122333 3678887753 233456666542
Q ss_pred CCeEEEEeechhhhhhhcCCCCCCCceEEEe-cC-CEEEEEEcCCccEEEEEccccCC
Q 046684 278 DIWCLIEKVPIEMGMRLSGGKASWGGTRCAA-GN-GAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 278 ~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+-......+... ...++. .+ +.||+.+...+.+..||++ ..
T Consensus 257 g~~~~~~~~~~~~------------~~~i~~~~dg~~l~v~~~~~~~l~~~~~~--~~ 300 (314)
T 1pjx_A 257 GQPKMRIRCPFEK------------PSNLHFKPQTKTIFVTEHENNAVWKFEWQ--RN 300 (314)
T ss_dssp BSCSEEEECSSSC------------EEEEEECTTSSEEEEEETTTTEEEEEECS--SC
T ss_pred CcEeEEEeCCCCC------------ceeEEECCCCCEEEEEeCCCCeEEEEeCC--CC
Confidence 2222222222111 233332 34 4588887776789999998 55
No 168
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.69 E-value=1.7 Score=38.91 Aligned_cols=99 Identities=10% Similarity=0.111 Sum_probs=48.7
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCce-eEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
|.+.+. +.....|..||+.+++-... +..+.... .+.. -+|+.++.++ .+..+.+|++.. ......+..-
T Consensus 308 g~~l~s-gs~D~~i~iwd~~~~~~~~~---~~~h~~~v~~v~~~~~g~~l~s~s-~D~~i~vwd~~~---~~~~~~~~~h 379 (410)
T 1vyh_C 308 GPFLLS-GSRDKTIKMWDVSTGMCLMT---LVGHDNWVRGVLFHSGGKFILSCA-DDKTLRVWDYKN---KRCMKTLNAH 379 (410)
T ss_dssp CCEEEE-EETTSEEEEEETTTTEEEEE---EECCSSCEEEEEECSSSSCEEEEE-TTTEEEEECCTT---SCCCEEEECC
T ss_pred CCEEEE-EeCCCeEEEEECCCCceEEE---EECCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCC---CceEEEEcCC
Confidence 444444 44567799999987653222 11111111 2222 2455555544 445589999864 1222222211
Q ss_pred chhhhhhhcCCCCCCCceEEEe-cCCEEEEEEcCCccEEEEEc
Q 046684 287 PIEMGMRLSGGKASWGGTRCAA-GNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~yd~ 328 (373)
... ...+.. .++..++.++.++.+.+||.
T Consensus 380 ~~~-------------v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 380 EHF-------------VTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSC-------------EEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCc-------------EEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 111 122222 34556666777777888875
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.68 E-value=2.3 Score=38.07 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=56.4
Q ss_pred EEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechh
Q 046684 211 LYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIE 289 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~ 289 (373)
+...+|.....|..||+.+++-... ...... ........ ++.|++..|..+..+.+|++.. .+.+..+..-
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~~-~~~~~~-v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~------~~~v~~l~gH 363 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLSA-VDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPT------MAKVAELKGH 363 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEEE-EECSSC-EEEEEEETTTTEEEEEECTTTCCEEEEETTT------CCEEEEECCC
T ss_pred EEEEeecCCCEEEEEeCCcccccee-eccccc-eeeeeecCCCCeEEEEEecCCCEEEEEECCC------CcEEEEEcCC
Confidence 3334455667899999988765443 222111 11112222 3455555565556689998844 4556555321
Q ss_pred hhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 290 MGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
. ......++..++..++.++.++.|.+||+.
T Consensus 364 ~---------~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 364 T---------SRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp S---------SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred C---------CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 0 000122233466777778777789999886
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.65 E-value=1.7 Score=36.59 Aligned_cols=195 Identities=12% Similarity=0.025 Sum_probs=99.3
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
++.+|+.+.. ...+++||+.++ .+.+.... .. ...+..++ + +++|+.... ...+.
T Consensus 39 g~~l~~~~~~--~~~i~~~~~~~~-~~~~~~~~---~~-~~~l~~~~---d-----g~l~v~~~~----------~~~i~ 93 (296)
T 3e5z_A 39 RSAVIFSDVR--QNRTWAWSDDGQ-LSPEMHPS---HH-QNGHCLNK---Q-----GHLIACSHG----------LRRLE 93 (296)
T ss_dssp GTEEEEEEGG--GTEEEEEETTSC-EEEEESSC---SS-EEEEEECT---T-----CCEEEEETT----------TTEEE
T ss_pred CCEEEEEeCC--CCEEEEEECCCC-eEEEECCC---CC-cceeeECC---C-----CcEEEEecC----------CCeEE
Confidence 3336665543 457899999987 54443211 11 12222221 1 667775422 14689
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEE----c------------CCceEEEEEECCCCcEEecc
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWIT----S------------ARAYSVIGFDIESNTWRELS 236 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~g----g------------~~~~~i~~yd~~~~~w~~~~ 236 (373)
+||..+++.+.+...... ........+++ -+|.+|+.. . .....|+.+|+. ++...+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~----~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEG----KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp EECSTTCCEEEEECEETT----EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred EEcCCCCcEEEEeeccCC----CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 999988887665332110 01111112222 258888862 1 013489999988 5555541
Q ss_pred cCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCe-EEEEeechhhhhhhcCCCCCCCceEEEecCCEEE
Q 046684 237 APMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIW-CLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAIC 314 (373)
Q Consensus 237 ~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W-~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 314 (373)
... ....+++. -+|+++ +.......+.+|+++. +.+. .....+ ... .+ .....+...++.||
T Consensus 169 ~~~---~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~---~g~~~~~~~~~-~~~-----~~---~p~~i~~d~~G~l~ 232 (296)
T 3e5z_A 169 RDR---VKPNGLAFLPSGNLL-VSDTGDNATHRYCLNA---RGETEYQGVHF-TVE-----PG---KTDGLRVDAGGLIW 232 (296)
T ss_dssp CCC---SSEEEEEECTTSCEE-EEETTTTEEEEEEECS---SSCEEEEEEEE-CCS-----SS---CCCSEEEBTTSCEE
T ss_pred cCC---CCCccEEECCCCCEE-EEeCCCCeEEEEEECC---CCcCcCCCeEe-eCC-----CC---CCCeEEECCCCCEE
Confidence 111 11123333 367766 5444444577777752 2444 222222 110 00 00123444577888
Q ss_pred EEEcCCccEEEEEccccCCcccEEEe
Q 046684 315 LYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 315 ~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
+.. .+.+.+||++ .+ .-..+
T Consensus 233 v~~--~~~v~~~~~~--g~--~~~~~ 252 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD--GD--ELGRV 252 (296)
T ss_dssp EEE--TTEEEEECTT--SC--EEEEE
T ss_pred EEc--CCeEEEECCC--CC--EEEEE
Confidence 877 4579999998 66 44444
No 171
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.60 E-value=0.96 Score=38.46 Aligned_cols=140 Identities=10% Similarity=-0.025 Sum_probs=75.8
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEECC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~~ 228 (373)
+++|.+.... ..++.||+.++.-+... .+. . ....+. -+|.+++.. ...|..||++
T Consensus 25 ~~l~~~d~~~----------~~i~~~d~~~~~~~~~~-~~~------~---~~~i~~~~dG~l~v~~---~~~l~~~d~~ 81 (297)
T 3g4e_A 25 NSLLFVDIPA----------KKVCRWDSFTKQVQRVT-MDA------P---VSSVALRQSGGYVATI---GTKFCALNWK 81 (297)
T ss_dssp TEEEEEETTT----------TEEEEEETTTCCEEEEE-CSS------C---EEEEEEBTTSSEEEEE---TTEEEEEETT
T ss_pred CEEEEEECCC----------CEEEEEECCCCcEEEEe-CCC------c---eEEEEECCCCCEEEEE---CCeEEEEECC
Confidence 6777775332 46889999887654332 110 0 011122 257766552 4689999999
Q ss_pred CCcEEecccCCCCC--CCc-eeE-EEECCEEEEEEeecC--------CceEEEEeecCCCCCCeEEEEe-echhhhhhhc
Q 046684 229 SNTWRELSAPMADR--LEF-ATL-VSRNQKLTLIGGTCG--------GDACVWELSEGGDDDIWCLIEK-VPIEMGMRLS 295 (373)
Q Consensus 229 ~~~w~~~~~~~p~~--~~~-~~~-~~~~g~l~~~gg~~~--------~~~~i~~~~~~~~~~~W~~v~~-~p~~~~~~~~ 295 (373)
+++++.+ ...+.. ... ..+ +.-+|+||+...... ....+|.++. + .+-..+.. +..+.
T Consensus 82 ~g~~~~~-~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~--~-g~~~~~~~~~~~pn----- 152 (297)
T 3g4e_A 82 EQSAVVL-ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP--D-HHVKKYFDQVDISN----- 152 (297)
T ss_dssp TTEEEEE-EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT--T-SCEEEEEEEESBEE-----
T ss_pred CCcEEEE-EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC--C-CCEEEEeecccccc-----
Confidence 9988876 332211 111 122 233788887543221 2247888875 2 33333221 21111
Q ss_pred CCCCCCCceEEEecCCEEEEEEcCCccEEEEEc
Q 046684 296 GGKASWGGTRCAAGNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~ 328 (373)
.......+..+|+.+...+.|+.||.
T Consensus 153 -------gi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 153 -------GLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp -------EEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred -------ceEEcCCCCEEEEecCCCCcEEEEec
Confidence 12222345678888877778888886
No 172
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.51 E-value=2.4 Score=37.57 Aligned_cols=105 Identities=9% Similarity=-0.002 Sum_probs=56.5
Q ss_pred EEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee-
Q 046684 210 MLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV- 286 (373)
Q Consensus 210 ~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~- 286 (373)
.+.+.+ .....|..+|+.+++.... ............+.. +|.+++.++ .+..+.+|++.. . +.+..+
T Consensus 145 ~~l~s~-~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~----~--~~~~~~~ 215 (402)
T 2aq5_A 145 NVLLSA-GCDNVILVWDVGTGAAVLT-LGPDVHPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRK----G--TVVAEKD 215 (402)
T ss_dssp TEEEEE-ETTSCEEEEETTTTEEEEE-ECTTTCCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTT----T--EEEEEEE
T ss_pred CEEEEE-cCCCEEEEEECCCCCccEE-EecCCCCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCC----C--ceeeeec
Confidence 345453 3456799999998865543 211112222222222 566666654 344589999854 3 333333
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEE---cCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYR---EVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~yd~~~~~~ 333 (373)
..... ......+...++.+++.+ ...+.+.+||.+ +.
T Consensus 216 ~~~~~--------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~--~~ 255 (402)
T 2aq5_A 216 RPHEG--------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTK--HL 255 (402)
T ss_dssp CSSCS--------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETT--BC
T ss_pred cCCCC--------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCc--cc
Confidence 11100 000233344567777777 567789999998 64
No 173
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.50 E-value=1.5 Score=41.29 Aligned_cols=106 Identities=4% Similarity=-0.060 Sum_probs=53.5
Q ss_pred EEEEEcCCceEEEEEECCCCcEEecccCCCCCC--CceeEEEE-C-CEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 211 LYWITSARAYSVIGFDIESNTWRELSAPMADRL--EFATLVSR-N-QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~--~~~~~~~~-~-g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+.+. +.....+..||..+.+-... ....... .-..+... + +.+++.++. +..+.+|++.. .+ .+..+
T Consensus 175 ~l~~-~~~d~~v~vwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~----~~--~~~~~ 245 (615)
T 1pgu_A 175 RSMT-VGDDGSVVFYQGPPFKFSAS-DRTHHKQGSFVRDVEFSPDSGEFVITVGS-DRKISCFDGKS----GE--FLKYI 245 (615)
T ss_dssp EEEE-EETTTEEEEEETTTBEEEEE-ECSSSCTTCCEEEEEECSTTCCEEEEEET-TCCEEEEETTT----CC--EEEEC
T ss_pred EEEE-EeCCCcEEEEeCCCcceeee-ecccCCCCceEEEEEECCCCCCEEEEEeC-CCeEEEEECCC----CC--EeEEe
Confidence 3444 34567888999877654333 1211110 11122222 4 666666554 44579999854 32 33333
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
......+ ... ...+...++..++.++..+.+.+||++ ++
T Consensus 246 ~~~~~~~-----~~~-v~~~~~~~~~~l~~~~~d~~i~~wd~~--~~ 284 (615)
T 1pgu_A 246 EDDQEPV-----QGG-IFALSWLDSQKFATVGADATIRVWDVT--TS 284 (615)
T ss_dssp CBTTBCC-----CSC-EEEEEESSSSEEEEEETTSEEEEEETT--TT
T ss_pred ccccccc-----CCc-eEEEEEcCCCEEEEEcCCCcEEEEECC--CC
Confidence 1100000 000 122222266677777777789999999 77
No 174
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.48 E-value=0.31 Score=43.39 Aligned_cols=107 Identities=7% Similarity=0.102 Sum_probs=55.0
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCC----CCce-eEEEE-CC-EEEEEEeecCC--ceEEEEeecCCCCCC
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADR----LEFA-TLVSR-NQ-KLTLIGGTCGG--DACVWELSEGGDDDI 279 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~----~~~~-~~~~~-~g-~l~~~gg~~~~--~~~i~~~~~~~~~~~ 279 (373)
+.+.+.+ .....|..||+.+++-... ...+.. .... .+... ++ .+++.++.++. .+.+|++.. ....
T Consensus 178 ~~~l~~~-~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~--~~~~ 253 (416)
T 2pm9_A 178 AHVFASA-GSSNFASIWDLKAKKEVIH-LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN--ANTP 253 (416)
T ss_dssp TTEEEEE-SSSSCEEEEETTTTEEEEE-ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS--TTSC
T ss_pred CcEEEEE-cCCCCEEEEECCCCCcceE-EeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC--CCCC
Confidence 4555553 4567799999988765443 222211 1112 22222 33 46666554431 578999865 1111
Q ss_pred eEEEEeechhhhhhhcCCCCCCCceEEE-ec-CCEEEEEEcCCccEEEEEccccCC
Q 046684 280 WCLIEKVPIEMGMRLSGGKASWGGTRCA-AG-NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 280 W~~v~~~p~~~~~~~~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
- ..+.. +... ....+. .. ++.+++.++..+.+.+||++ ++
T Consensus 254 ~---~~~~~--------~~~~-~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~--~~ 295 (416)
T 2pm9_A 254 L---QTLNQ--------GHQK-GILSLDWCHQDEHLLLSSGRDNTVLLWNPE--SA 295 (416)
T ss_dssp S---BCCCS--------CCSS-CEEEEEECSSCSSCEEEEESSSEEEEECSS--SC
T ss_pred c---EEeec--------CccC-ceeEEEeCCCCCCeEEEEeCCCCEEEeeCC--CC
Confidence 1 11110 0000 012222 22 66777777777789999998 76
No 175
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.47 E-value=2.7 Score=40.58 Aligned_cols=111 Identities=12% Similarity=0.124 Sum_probs=52.0
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVP 287 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p 287 (373)
+|.+.+.+ .....|..+|+.+.+-... +........++...+..+++.+.+ ..+.+|+++. . +.+..+.
T Consensus 572 dg~~l~sg-~~Dg~i~iwd~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~~----~--~~~~~~~ 640 (694)
T 3dm0_A 572 DGSLCASG-GKDGVVLLWDLAEGKKLYS---LEANSVIHALCFSPNRYWLCAATE-HGIKIWDLES----K--SIVEDLK 640 (694)
T ss_dssp TSSEEEEE-ETTSBCEEEETTTTEEEEC---CBCSSCEEEEEECSSSSEEEEEET-TEEEEEETTT----T--EEEEEEC
T ss_pred CCCEEEEE-eCCCeEEEEECCCCceEEE---ecCCCcEEEEEEcCCCcEEEEEcC-CCEEEEECCC----C--CChhhhc
Confidence 46655554 4467788999987754322 111112222333333334444433 3489999854 3 3333222
Q ss_pred hhhhhh------hcC---CCCCCCce-EEEecCCEEEEEEcCCccEEEEEcc
Q 046684 288 IEMGMR------LSG---GKASWGGT-RCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 288 ~~~~~~------~~~---~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
...... ... ........ .....++..++.++.++.|.+||+.
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 641 VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 110000 000 00000011 2223467777778888889999875
No 176
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.45 E-value=2.2 Score=36.82 Aligned_cols=190 Identities=8% Similarity=0.041 Sum_probs=85.9
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...+.+||..+++...+..... ....+.+...+ ++++++.++.+ ..+.+||..+++-...
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~--------~~~~l~~~~~d----------g~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDA--PVKTIHWIKAP--------NYSCVMTGSWD----------KTLKFWDTRSSNPMMV 166 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSS--CEEEEEEEECS--------SCEEEEEEETT----------SEEEEECSSCSSCSEE
T ss_pred CCcEEEEEcCCCCceeeccccC--ceEEEEEEeCC--------CCCEEEEccCC----------CcEEEEECCCCcEEEE
Confidence 4689999999887655322111 11122221111 15666666554 4689999877642111
Q ss_pred cCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCc--EEecccCCCCCCCceeEEEE-CC---EEEEEE
Q 046684 186 GSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNT--WRELSAPMADRLEFATLVSR-NQ---KLTLIG 259 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~--w~~~~~~~p~~~~~~~~~~~-~g---~l~~~g 259 (373)
-..+ ............+++. .....+..||..... +..+ ..+.......+... +. .-.++.
T Consensus 167 ~~~~---------~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 167 LQLP---------ERCYCADVIYPMAVVA--TAERGLIVYQLENQPSEFRRI--ESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp EECS---------SCEEEEEEETTEEEEE--EGGGCEEEEECSSSCEEEEEC--CCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EecC---------CCceEEEecCCeeEEE--eCCCcEEEEEeccccchhhhc--cccccCCCceEEEcccCCCCCCeEEE
Confidence 1111 0111123334444444 245678888887653 3333 11221111122211 11 111333
Q ss_pred eecCCceEEEEeecCCCCC---CeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 260 GTCGGDACVWELSEGGDDD---IWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 260 g~~~~~~~i~~~~~~~~~~---~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+..+..+.+|+++. ... .......-..... .............+...++.+++.++..+.+.+||.+ ++
T Consensus 234 ~~~dg~i~i~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~--~~ 305 (368)
T 3mmy_A 234 GSIEGRVAIHYINP--PNPAKDNFTFKCHRSNGTN-TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD--AR 305 (368)
T ss_dssp EETTSEEEEEESSC--SCHHHHSEEEECSEEC-----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT--TT
T ss_pred ecCCCcEEEEecCC--CCccccceeeeeeeccccc-ccccccccceEEEEEecCCCEEEEEccCCeEEEEECC--CC
Confidence 44555689999875 211 1111100000000 0000000000122223356677777777889999999 77
No 177
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.41 E-value=0.97 Score=39.69 Aligned_cols=175 Identities=8% Similarity=-0.003 Sum_probs=91.9
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeec
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIG 186 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 186 (373)
..+...++.......+.+- ... ..++..+.. + ++||...-. ...++.++..+..-+.+.
T Consensus 53 ~~I~~i~~~g~~~~~~~~~---~~~-~~~l~~d~~--~-----~~ly~~D~~----------~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN---LEN-AIALDFHHR--R-----ELVFWSDVT----------LDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SCEEEECTTSCCEEEEECS---CSC-EEEEEEETT--T-----TEEEEEETT----------TTEEEEEETTSCSCEEEE
T ss_pred cceEEEeCCCCeeEEeecC---CCc-eEEEEEecc--c-----cEEEEEecc----------CCceEEEecCCCCceEEE
Confidence 4577888877666543221 111 222222211 1 778887422 246888888776544432
Q ss_pred CCCccccccceeccCCceEE--ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeec
Q 046684 187 SMPVEFAVRLTVWTPNESVC--TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTC 262 (373)
Q Consensus 187 ~~p~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~ 262 (373)
... .......++ .+|.|||.. .....|.++|+....-..+ ...... .-.++++- +|.||+.....
T Consensus 112 ~~~--------~~~p~glavd~~~g~ly~~d-~~~~~I~~~~~dG~~~~~l-~~~~l~-~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 112 STG--------LESPGGLAVDWVHDKLYWTD-SGTSRIEVANLDGAHRKVL-LWQSLE-KPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp CSS--------CSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCEEE-ECTTCS-CEEEEEEETTTTEEEEEECSS
T ss_pred eCC--------CCCccEEEEecCCCeEEEEc-CCCCeEEEEcCCCCceEEE-EeCCCC-CcceEEEecCcCeEEEeccCC
Confidence 211 001122333 368999994 4457899999886654443 221111 11234443 68899886433
Q ss_pred CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 263 GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 263 ~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.. .|+..+. +...-+.+. .... ..+..++. .++.||+.+.....|..+|++
T Consensus 181 ~~--~I~r~~~--dG~~~~~~~--~~~~----------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 181 TP--RIEASSM--DGSGRRIIA--DTHL----------FWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SC--EEEEEET--TSCSCEESC--CSSC----------SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CC--EEEEEeC--CCCCcEEEE--ECCC----------CCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 12 4555544 222111111 1110 11333443 488999999887889999988
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.38 E-value=3.5 Score=38.90 Aligned_cols=243 Identities=6% Similarity=-0.028 Sum_probs=114.0
Q ss_pred eeEEEEeCCCCCcc-ccCCCCCCCCceeEEee-CcEEEEeeCCCCceEEEEEcCc--ccceeccCCCCCCCCCCeEEEEE
Q 046684 63 LCCYVHNPVSDKWH-VLSLDFLPYPVRPVSSI-GSFLLLRPINSTILQLVLCNPF--TRQFRYLPLLNVSRTNPAVGIVM 138 (373)
Q Consensus 63 ~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~-~g~l~~~gg~~~~~~~~v~np~--t~~w~~lp~~~~~~~~~~~~~~~ 138 (373)
..+.++|..+.+-. .++....+. ....+- +..+|+.+. ...+.++|+. |.+- +...+.......+++-.
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~~p~--~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~--v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGYAVH--ISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTT--VAEIKIGSEARSIETSK 249 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEE--EEEECTTSCEEEEEET---TSEEEEEETTSSSCCE--EEEEECCSEEEEEEECC
T ss_pred CeEEEEECCCCeEEEEEeCCCCcc--ceEECCCCCEEEEEcC---CCeEEEEECCCCCCcE--eEEEecCCCCceeEEcc
Confidence 67888999887543 333322222 223333 556787664 4689999996 5432 22222221111222210
Q ss_pred c--CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCcc---ccc---cceeccCCceEEECCE
Q 046684 139 E--GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVE---FAV---RLTVWTPNESVCTRGM 210 (373)
Q Consensus 139 ~--~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---~~~---~~~~~~~~~~~~~~g~ 210 (373)
. +. + ..+|+.... ...+.++|..+.+ .+..++.. ... .+..+...-.+..++.
T Consensus 250 ~~~pD-G------k~l~v~n~~----------~~~v~ViD~~t~~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 250 MEGWE-D------KYAIAGAYW----------PPQYVIMDGETLE--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp STTCT-T------TEEEEEEEE----------TTEEEEEETTTCC--EEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred ccCCC-C------CEEEEEEcc----------CCeEEEEECCCCc--EEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 0 01 1 456665432 2567888876643 33222110 000 0000100001111233
Q ss_pred EEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeech-
Q 046684 211 LYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPI- 288 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~- 288 (373)
.+++.-...+.|...|..+.+...+ ...+..+.-+.. ...+|+.+++.......+.++++++ . +.+..++.
T Consensus 311 ~~vv~~~~~g~v~~vd~~~~~~~~v-~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t----~--kl~~~i~vg 383 (567)
T 1qks_A 311 EFIVNVKETGKILLVDYTDLNNLKT-TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE----G--KLVAIEDTG 383 (567)
T ss_dssp EEEEEETTTTEEEEEETTCSSEEEE-EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT----T--EEEEEEECS
T ss_pred EEEEEecCCCeEEEEecCCCcccee-eeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC----C--cEEEEEecc
Confidence 3444334567888888876654333 222222222222 2336665555544444567776654 3 34444543
Q ss_pred hhhhhhcCCCCCCCceEEEec-CCEEEEEEc-CCccEEEEEccccCCc---ccEEEecccccC
Q 046684 289 EMGMRLSGGKASWGGTRCAAG-NGAICLYRE-VGLGMIIWREDEDKRK---WEWVWVGGCCLT 346 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~~yd~~~~~~~---~~W~~~~~~~~~ 346 (373)
....+ ++ +...++.. ++.+|+... ..+.+.++|.+ +.+ -.|+.+...+..
T Consensus 384 g~~Ph--pg----~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~--~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 384 GQTPH--PG----RGANFVHPTFGPVWATSHMGDDSVALIGTD--PEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp SSSBC--CT----TCEEEEETTTEEEEEEEBSSSSEEEEEECC--TTTCTTTBTSEEEEEECS
T ss_pred CcCCC--Cc----cceeeECCCCCcEEEeCCCCCCeEEEecCC--CCCCccccCEEEEEEecC
Confidence 22111 10 12333333 477888764 34679999988 530 028777665544
No 179
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.38 E-value=3.5 Score=38.99 Aligned_cols=115 Identities=10% Similarity=0.076 Sum_probs=67.1
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCCC------CCCeEEEEEcCCCCCCCCCceEEEEEeccCCC
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVSR------TNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDE 161 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~~------~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~ 161 (373)
-...+|.||+.... ..++.+|..|++ |+.-...+... ...+.++.+ ++||+... +
T Consensus 64 P~v~~g~vyv~~~~---~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~-----------~~v~~~t~-d-- 126 (582)
T 1flg_A 64 AIVSDGVIYVTASY---SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYG-----------DKVFFGTL-D-- 126 (582)
T ss_dssp CEEETTEEEEEETT---TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEET-----------TEEEEEET-T--
T ss_pred cEEECCEEEEEcCC---CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEEC-----------CEEEEEeC-C--
Confidence 34679999998763 349999999886 76533222110 012223332 77877432 1
Q ss_pred CCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEEECC------EEEEEEc----CCceEEEEEECCC
Q 046684 162 PRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVCTRG------MLYWITS----ARAYSVIGFDIES 229 (373)
Q Consensus 162 ~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~~~g------~ly~~gg----~~~~~i~~yd~~~ 229 (373)
..+..+|.++++ |+.-...+. .......+.++.++ .+|+-.. .....+.+||+++
T Consensus 127 --------g~l~AlD~~TG~~~W~~~~~~~~-----~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 127 --------ASVVALNKNTGKVVWKKKFADHG-----AGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp --------TEEEEEESSSCCEEEEEECSCGG-----GTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred --------CEEEEEECCCCCEEeeecCCCCC-----cCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 368999998876 876433211 00111233455667 7776421 1257899999987
Q ss_pred Cc--EEe
Q 046684 230 NT--WRE 234 (373)
Q Consensus 230 ~~--w~~ 234 (373)
++ |+.
T Consensus 194 G~~~W~~ 200 (582)
T 1flg_A 194 GEEIWMR 200 (582)
T ss_dssp CCEEEEE
T ss_pred CCEEeec
Confidence 64 864
No 180
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.37 E-value=2.1 Score=36.41 Aligned_cols=56 Identities=13% Similarity=-0.017 Sum_probs=31.7
Q ss_pred eeEEEEeCCCCCccc-cCCCCCC-CCceeEEeeCc-EEEEeeCCCCceEEEEEcCccccee
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLP-YPVRPVSSIGS-FLLLRPINSTILQLVLCNPFTRQFR 120 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~-~~~~~~~~~~g-~l~~~gg~~~~~~~~v~np~t~~w~ 120 (373)
..+.++|..+.+... +...... .......+.+| .+|+.+.. ...+.++|+.+++..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLVKIDLVTGETL 69 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT--TTEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC--CCeEEEEECCCCCeE
Confidence 467778987765432 2222210 12222334444 77776653 467999999988754
No 181
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.33 E-value=2.6 Score=37.18 Aligned_cols=185 Identities=14% Similarity=0.146 Sum_probs=90.5
Q ss_pred ceEEEEEcCcccceeccC--CCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc--
Q 046684 106 ILQLVLCNPFTRQFRYLP--LLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-- 181 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp--~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-- 181 (373)
...+.+||..+++-...- ..+.........+.... .+ ..+++.|+.+ ..+.+||.+...
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~-----~~~l~sgs~D----------~~v~~wd~~~~~~~ 241 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS--LN-----ANMFISGSCD----------TTVRLWDLRITSRA 241 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS--SS-----CCEEEEEETT----------SCEEEEETTTTCCC
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec--CC-----CCEEEEEECC----------CeEEEEECCCCCcc
Confidence 567899999988754321 11111111122222111 11 5567777654 468889986322
Q ss_pred eeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCC----CCce-eE-EEECCE
Q 046684 182 WQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADR----LEFA-TL-VSRNQK 254 (373)
Q Consensus 182 W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~----~~~~-~~-~~~~g~ 254 (373)
-+.+..- ...-..+++. +|...+. +.....+..+|+.+++-...-...+.. .... .+ ...+|+
T Consensus 242 ~~~~~~h---------~~~v~~v~~~p~~~~l~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 242 VRTYHGH---------EGDINSVKFFPDGQRFGT-GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR 311 (380)
T ss_dssp CEEECCC---------SSCCCEEEECTTSSEEEE-ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS
T ss_pred eEEECCc---------CCCeEEEEEecCCCeEEE-EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC
Confidence 1221111 0011122222 4555555 455677999999887543320111111 1111 22 223677
Q ss_pred EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 255 LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 255 l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
+++.|+ .+..+.+|+... .+ .+..+.... .+.........+..++..++.++.++.+.+||+.
T Consensus 312 ~l~~g~-~dg~i~vwd~~~----~~--~~~~~~~~~-----~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 312 LLFAGY-SNGDCYVWDTLL----AE--MVLNLGTLQ-----NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEEEEC-TTSCEEEEETTT----CC--EEEEECCSC-----SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EEEEEE-CCCCEEEEECCC----Cc--eEEEEeccc-----CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 666654 445579998754 22 222221100 0001111233344467777888888889999988
No 182
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.32 E-value=2.2 Score=36.40 Aligned_cols=197 Identities=13% Similarity=0.167 Sum_probs=91.3
Q ss_pred EEEEeCCCC-CccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCc-ccceeccCCCCCCCCCCeEEEEEcCCC
Q 046684 65 CYVHNPVSD-KWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPF-TRQFRYLPLLNVSRTNPAVGIVMEGPA 142 (373)
Q Consensus 65 ~~~~d~~~~-~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~-t~~w~~lp~~~~~~~~~~~~~~~~~~~ 142 (373)
+..||+..+ .|... ....... .....+|.|++... ...++.+|+. ...|+.-.+.+ . ..+.+ .. .
T Consensus 80 l~~~d~~g~~~~~~~-~~~~~~~--~~~~~~~~l~v~t~---~~~l~~~d~~g~~~~~~~~~~~--~-~~~~~-~~-~-- 146 (330)
T 3hxj_A 80 VYAINPDGTEKWRFD-TKKAIVS--DFTIFEDILYVTSM---DGHLYAINTDGTEKWRFKTKKA--I-YATPI-VS-E-- 146 (330)
T ss_dssp EEEECCCGGGGGGSC-C-----C--CEEEETTEEEEECT---TSEEEEECTTSCEEEEEECSSC--C-CSCCE-EC-T--
T ss_pred EEEECCCCcEEEEEE-CCCCccc--CceEECCEEEEEec---CCEEEEEcCCCCEEEEEcCCCc--e-eeeeE-Ec-C--
Confidence 777887433 24322 1111111 22334898988664 4678999998 22354322211 1 11111 11 1
Q ss_pred CCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc--eeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCc
Q 046684 143 QHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARA 219 (373)
Q Consensus 143 ~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~ 219 (373)
+ +++++.. .+ ..+..||.. ++ |+.....+ .....+. -+|.+|+. .
T Consensus 147 -~-----g~l~vgt-~~----------~~l~~~d~~-g~~~~~~~~~~~----------~~~~~~~d~~g~l~v~-t--- 194 (330)
T 3hxj_A 147 -D-----GTIYVGS-ND----------NYLYAINPD-GTEKWRFKTNDA----------ITSAASIGKDGTIYFG-S--- 194 (330)
T ss_dssp -T-----SCEEEEC-TT----------SEEEEECTT-SCEEEEEECSSC----------CCSCCEECTTCCEEEE-S---
T ss_pred -C-----CEEEEEc-CC----------CEEEEECCC-CCEeEEEecCCC----------ceeeeEEcCCCEEEEE-e---
Confidence 1 6677632 21 368889887 43 65432211 1112233 36777765 2
Q ss_pred eEEEEEECCCC-cEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCC
Q 046684 220 YSVIGFDIESN-TWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 220 ~~i~~yd~~~~-~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~ 297 (373)
..+.+||...+ .|... .. .... ..++.. +|.|++... +.. ++.++. .....|..- .+....
T Consensus 195 ~~l~~~d~~g~~~~~~~-~~--~~~~-~~~~~~~~g~l~v~t~--~~g--l~~~~~-~g~~~~~~~--~~~~~~------ 257 (330)
T 3hxj_A 195 DKVYAINPDGTEKWNFY-AG--YWTV-TRPAISEDGTIYVTSL--DGH--LYAINP-DGTEKWRFK--TGKRIE------ 257 (330)
T ss_dssp SSEEEECTTSCEEEEEC-CS--SCCC-SCCEECTTSCEEEEET--TTE--EEEECT-TSCEEEEEE--CSSCCC------
T ss_pred CEEEEECCCCcEEEEEc-cC--Ccce-eceEECCCCeEEEEcC--CCe--EEEECC-CCCEeEEee--CCCCcc------
Confidence 78999994422 45543 21 1111 222333 557777542 222 333332 012234332 111110
Q ss_pred CCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 298 KASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
...+...++.||+.. ..+.+.+||++
T Consensus 258 -----~~~~~~~~g~l~v~t-~~ggl~~~d~~ 283 (330)
T 3hxj_A 258 -----SSPVIGNTDTIYFGS-YDGHLYAINPD 283 (330)
T ss_dssp -----SCCEECTTSCEEEEC-TTCEEEEECTT
T ss_pred -----ccceEcCCCeEEEec-CCCCEEEECCC
Confidence 122334477788743 34468899864
No 183
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.31 E-value=2.8 Score=37.59 Aligned_cols=233 Identities=8% Similarity=-0.015 Sum_probs=113.1
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccce-eccCCC-C-CCCCCCeEEEEEc
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQF-RYLPLL-N-VSRTNPAVGIVME 139 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w-~~lp~~-~-~~~~~~~~~~~~~ 139 (373)
..+..+|+.++.-..+.... ......+...++.+|+.... ....++++++.++.- ..+... + .......+++ .
T Consensus 152 ~~I~~id~~~g~~~~~~~~~-~~~~ia~~~~g~~l~~~d~~-~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav-~- 227 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF-KGGKPAVTKDKQRVYSIGWE-GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVAL-D- 227 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC-CBCBCEECTTSSEEEEEBSS-TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEE-C-
T ss_pred CcEEEEECCCCEEEEeeccC-CCCceeEecCCCcEEEEecC-CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEE-e-
Confidence 46667787766544442111 11113344445677776542 123899999987543 233111 1 1111122222 2
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccC-C-ceEEE--CCEEEEEE
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTP-N-ESVCT--RGMLYWIT 215 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~-~~~~~--~g~ly~~g 215 (373)
+. ++.||+... . ..++.||..++.-+.+...+.. ...... . ..++. +|.+|+..
T Consensus 228 p~-------~g~lyv~d~-~----------~~I~~~d~~~~~~~~~~~~~~~----g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 228 ET-------EEWLYFVDS-N----------KNFGRFNVKTQEVTLIKQLELS----GSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp TT-------SSEEEEECT-T----------CEEEEEETTTCCEEEEEECCCC----SCCCCSSCCEEEEETTTTEEEEEE
T ss_pred CC-------CCeEEEEEC-C----------CcEEEEECCCCCEEEEeccccc----CCCCCCccccEEEeCCCCEEEEEe
Confidence 10 178888321 1 3689999988775544222100 001111 1 34444 48999884
Q ss_pred cCCceEEEEEECCCCcEEecccCC--CCC---------CCc-eeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEE
Q 046684 216 SARAYSVIGFDIESNTWRELSAPM--ADR---------LEF-ATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~--p~~---------~~~-~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~ 282 (373)
.....|..||+... ...+.... +.. ... .+++.. +|.||+........+..|++.. ..-+.
T Consensus 286 -~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~----G~v~~ 359 (409)
T 3hrp_A 286 -QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD----GYVST 359 (409)
T ss_dssp -TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT----TEEEE
T ss_pred -CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC----CEEEE
Confidence 45678999998765 22221111 000 111 233332 6788888641233345555322 44444
Q ss_pred EEeechhhhhhhcCC----CCCCCceEEEec-CCEEEEEEcCCccEEEEEcc
Q 046684 283 IEKVPIEMGMRLSGG----KASWGGTRCAAG-NGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 283 v~~~p~~~~~~~~~~----~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd~~ 329 (373)
+...+.... ...+ .....+..++.. ++.||+.+.....|..++++
T Consensus 360 ~~g~~~~~g--~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 360 VAGQVDVAS--QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEECTTCBS--CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EeCCCCCCC--cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 333211100 0000 001124555554 58999998888888888764
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.29 E-value=2.8 Score=37.36 Aligned_cols=119 Identities=11% Similarity=0.055 Sum_probs=68.5
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCC---------CC-CCc-eeEEE--ECCEEEEEEeecC------CceEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMA---------DR-LEF-ATLVS--RNQKLTLIGGTCG------GDACV 268 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p---------~~-~~~-~~~~~--~~g~l~~~gg~~~------~~~~i 268 (373)
+|+++|.. ....+..+|..++.-..+ .+.. .- -.+ ..++. -+++||+...... ..-+|
T Consensus 237 dG~~~~vs--~~g~V~v~d~~~~~~~v~-~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 237 AGRLVWPT--YTGKIHQIDLSSGDAKFL-PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTEEEEEB--TTSEEEEEECTTSSCEEC-CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred CCcEEEEe--CCCEEEEEECCCCcceee-cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 67777763 356789999876642222 1110 00 011 11222 2678999764321 12579
Q ss_pred EEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC-EEEEEEcCCccEEEEEccccCCcccEEEecccccCC
Q 046684 269 WELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG-AICLYREVGLGMIIWREDEDKRKWEWVWVGGCCLTG 347 (373)
Q Consensus 269 ~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~~~~ 347 (373)
|.++. .+++.+..++.+.... ...+...+. .+|+.++.++.+.+||.+ ++ +.+...+..+
T Consensus 314 ~viD~----~t~kv~~~i~vg~~~~---------~lavs~D~~~~ly~tn~~~~~VsViD~~--t~----k~~~~i~~~~ 374 (386)
T 3sjl_D 314 VVLDA----KTGERLAKFEMGHEID---------SINVSQDEKPLLYALSTGDKTLYIHDAE--SG----EELRSVNQLG 374 (386)
T ss_dssp EEEET----TTCCEEEEEEEEEEEC---------EEEECSSSSCEEEEEETTTTEEEEEETT--TC----CEEEEECCCC
T ss_pred EEEEC----CCCeEEEEEECCCCcc---------eEEECCCCCeEEEEEcCCCCeEEEEECC--CC----cEEEEecCCC
Confidence 98887 7778888877654210 122222333 577777778899999999 88 4455555444
Q ss_pred C
Q 046684 348 G 348 (373)
Q Consensus 348 ~ 348 (373)
+
T Consensus 375 ~ 375 (386)
T 3sjl_D 375 H 375 (386)
T ss_dssp S
T ss_pred C
Confidence 4
No 185
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.29 E-value=2.6 Score=37.02 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=17.3
Q ss_pred cCCEEEEEEcCCccEEEEEccccCC
Q 046684 309 GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.++.+++.++..+.+.+||++ +.
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~--~~ 366 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPS--LY 366 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEEC--C-
T ss_pred CCCCEEEEECCCCeEEEEeCC--CC
Confidence 456667777777889999999 65
No 186
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.27 E-value=3 Score=37.71 Aligned_cols=61 Identities=10% Similarity=0.098 Sum_probs=33.2
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCc-eeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEF-ATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~-~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+.+.+.+ .....|..||+.+.+.... . ....... ..++..++++++.++ .+..+.+|++..
T Consensus 210 ~~~l~s~-~~d~~i~vwd~~~~~~~~~-~-~~~h~~~v~~~~~sd~~~l~s~~-~d~~v~vwd~~~ 271 (450)
T 2vdu_B 210 HQFIITS-DRDEHIKISHYPQCFIVDK-W-LFGHKHFVSSICCGKDYLLLSAG-GDDKIFAWDWKT 271 (450)
T ss_dssp CEEEEEE-ETTSCEEEEEESCTTCEEE-E-CCCCSSCEEEEEECSTTEEEEEE-SSSEEEEEETTT
T ss_pred CcEEEEE-cCCCcEEEEECCCCceeee-e-ecCCCCceEEEEECCCCEEEEEe-CCCeEEEEECCC
Confidence 5555554 4457789999887653322 0 1111111 122222677766665 344589999865
No 187
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.16 E-value=2.5 Score=36.46 Aligned_cols=186 Identities=8% Similarity=-0.041 Sum_probs=98.8
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceec-cCCCCCCCCCC-eEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRY-LPLLNVSRTNP-AVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~~~~~~~~~-~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
++.||..... ...+..+++....-.. +. ......+ .+++-... ++||+.-.. ...
T Consensus 46 ~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~--~~~l~~p~glavd~~~---------g~ly~~d~~----------~~~ 102 (318)
T 3sov_A 46 HGLIYWSDVS--EEAIKRTEFNKTESVQNVV--VSGLLSPDGLACDWLG---------EKLYWTDSE----------TNR 102 (318)
T ss_dssp GTEEEEEETT--TTEEEEEETTSSSCCCEEE--EECCSCCCEEEEETTT---------TEEEEEETT----------TTE
T ss_pred CCEEEEEECC--CCcEEEEEccCCCceEEEE--cCCCCCccEEEEEcCC---------CeEEEEECC----------CCE
Confidence 6788887653 4678888887653211 10 0111111 23322111 778886422 246
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLV 249 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~ 249 (373)
+++++.....=+.+..-. .......++- +|.|||........|.++++....-+.+ ..... ..-.+++
T Consensus 103 I~~~~~dG~~~~~l~~~~--------~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-~~~~l-~~Pngla 172 (318)
T 3sov_A 103 IEVSNLDGSLRKVLFWQE--------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII-INSEI-YWPNGLT 172 (318)
T ss_dssp EEEEETTSCSCEEEECSS--------CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE-ECSSC-SCEEEEE
T ss_pred EEEEECCCCcEEEEEeCC--------CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE-EECCC-CCccEEE
Confidence 888888654333332110 0011122332 5899998533467899999875443333 11111 1122445
Q ss_pred EE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEE
Q 046684 250 SR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 250 ~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd 327 (373)
.- +++||+.... ...+..++++. ..=+.+.. .. ...+..++..++.+|........|..+|
T Consensus 173 vd~~~~~lY~aD~~-~~~I~~~d~dG----~~~~~~~~---~~---------~~~P~glav~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 173 LDYEEQKLYWADAK-LNFIHKSNLDG----TNRQAVVK---GS---------LPHPFALTLFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp EETTTTEEEEEETT-TTEEEEEETTS----CSCEEEEC---SC---------CSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EeccCCEEEEEECC-CCEEEEEcCCC----CceEEEec---CC---------CCCceEEEEeCCEEEEEecCCCeEEEEE
Confidence 43 7889998642 22344444432 22222221 00 1125677778999999988778899999
Q ss_pred cc
Q 046684 328 ED 329 (373)
Q Consensus 328 ~~ 329 (373)
+.
T Consensus 236 ~~ 237 (318)
T 3sov_A 236 KY 237 (318)
T ss_dssp TT
T ss_pred CC
Confidence 96
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.14 E-value=1.6 Score=38.43 Aligned_cols=193 Identities=8% Similarity=-0.015 Sum_probs=91.2
Q ss_pred CeeEEEEeCCCCCccccCCCCCCCCceeEEee--CcEEEEeeCCCC---ceEEEEEcCcccceeccCCCCCCCCCCeEEE
Q 046684 62 GLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSI--GSFLLLRPINST---ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGI 136 (373)
Q Consensus 62 ~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~--~g~l~~~gg~~~---~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~ 136 (373)
...++.+|..+.+...+.... ........+. ++.|++...... ...++++|..+++++.+.. ........ ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~-~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCT-HE 243 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEE-EE
T ss_pred cceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCcccc-ce
Confidence 357778888776655543211 1111112233 343444432111 1579999998887776644 11111111 11
Q ss_pred EEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEE
Q 046684 137 VMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWIT 215 (373)
Q Consensus 137 ~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~g 215 (373)
...+.+ .+|+...... ......++++|..+++.+.+...+. . . ....- +|++++..
T Consensus 244 ~~spdg-------~~l~~~~~~~------~~~~~~l~~~d~~~g~~~~l~~~~~------~---~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 244 FWIPDG-------SAMAYVSYFK------GQTDRVIYKANPETLENEEVMVMPP------C---S-HLMSNFDGSLMVGD 300 (396)
T ss_dssp EECTTS-------SCEEEEEEET------TTCCEEEEEECTTTCCEEEEEECCS------E---E-EEEECSSSSEEEEE
T ss_pred EECCCC-------CEEEEEecCC------CCccceEEEEECCCCCeEEeeeCCC------C---C-CCccCCCCceEEEe
Confidence 111111 3344443221 1122458999998888776654431 0 1 11223 67766653
Q ss_pred cC---------------CceEEEEEECCCCcEEecccCCCCCC----------CceeEEEECCEEEEEEeecCCceEEEE
Q 046684 216 SA---------------RAYSVIGFDIESNTWRELSAPMADRL----------EFATLVSRNQKLTLIGGTCGGDACVWE 270 (373)
Q Consensus 216 g~---------------~~~~i~~yd~~~~~w~~~~~~~p~~~----------~~~~~~~~~g~l~~~gg~~~~~~~i~~ 270 (373)
+. ....++.+|+.+++...+ ...+... .......-+|+.+++.........+|.
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL-CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTBCCEE-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCceEEc-cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 21 236799999988876555 2222100 111122235543333333333457888
Q ss_pred eecCCCCCCeEEE
Q 046684 271 LSEGGDDDIWCLI 283 (373)
Q Consensus 271 ~~~~~~~~~W~~v 283 (373)
++. ++..++.+
T Consensus 380 ~~~--~~~~~~~~ 390 (396)
T 3c5m_A 380 ADV--PESYKHLE 390 (396)
T ss_dssp EEC--CTTCC---
T ss_pred EEE--cccccccc
Confidence 775 45555544
No 189
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.06 E-value=3.1 Score=37.19 Aligned_cols=103 Identities=7% Similarity=-0.071 Sum_probs=58.4
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++.|||.. .....|.++|++...-..+ ...... .-.++++ .+|.||+........ |+..+. +...=+.+..
T Consensus 170 ~~~lY~~d-~~~~~I~~~~~~g~~~~~l-~~~~~~-~P~~iavdp~~g~ly~td~~~~~~--I~~~~~--dG~~~~~~~~ 242 (400)
T 3p5b_L 170 HSNIYWTD-SVLGTVSVADTKGVKRKTL-FRENGS-KPRAIVVDPVHGFMYWTDWGTPAK--IKKGGL--NGVDIYSLVT 242 (400)
T ss_dssp TTEEEEEE-TTTTEEEEECTTTCSEEEE-EECSSC-CEEEEEEETTTTEEEEEECSSSCC--EEEEET--TSCSCEEEEC
T ss_pred CCceEEEE-CCCCeEEEEeCCCCceEEE-EeCCCC-CcceEEEecccCeEEEEeCCCCCE--EEEEeC--CCCccEEEEE
Confidence 68999994 4467899999987765554 221111 1123444 368899876322233 444443 1121122211
Q ss_pred echhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
... ..+..++. .++.||+.+.....|..+|++
T Consensus 243 --~~l----------~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 243 --ENI----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp --SSC----------SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --CCC----------CceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 110 01333443 478999998887889999988
No 190
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.98 E-value=1.1 Score=39.90 Aligned_cols=200 Identities=12% Similarity=0.056 Sum_probs=89.5
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|..++.++. ...+.+||..+++.... +..... ...++...+. ++.++.|+.+ ..+.
T Consensus 134 dg~~l~s~~~--d~~i~iwd~~~~~~~~~--~~~h~~-~v~~~~~~p~--------~~~l~s~s~d----------~~v~ 190 (393)
T 1erj_A 134 DGKFLATGAE--DRLIRIWDIENRKIVMI--LQGHEQ-DIYSLDYFPS--------GDKLVSGSGD----------RTVR 190 (393)
T ss_dssp TSSEEEEEET--TSCEEEEETTTTEEEEE--ECCCSS-CEEEEEECTT--------SSEEEEEETT----------SEEE
T ss_pred CCCEEEEEcC--CCeEEEEECCCCcEEEE--EccCCC-CEEEEEEcCC--------CCEEEEecCC----------CcEE
Confidence 5544444443 46789999988764332 111111 1112222111 3444555443 4688
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCC-----CCCCCce
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPM-----ADRLEFA 246 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~-----p~~~~~~ 246 (373)
+||.++++-........ ....+++. +|.+.+.+ .....|..||..+++-... ... ..+....
T Consensus 191 iwd~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~~~~-~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 191 IWDLRTGQCSLTLSIED---------GVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGFLVER-LDSENESGTGHKDSV 259 (393)
T ss_dssp EEETTTTEEEEEEECSS---------CEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCCEEEE-EC------CCCSSCE
T ss_pred EEECCCCeeEEEEEcCC---------CcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCcEEEe-ecccccCCCCCCCCE
Confidence 99988876432221110 01111222 45665554 4566788999987754322 111 1111111
Q ss_pred e-EEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEE
Q 046684 247 T-LVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMI 324 (373)
Q Consensus 247 ~-~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 324 (373)
. +... +|++++.++ .+..+.+|++.. ......... ...........+........+...++..++.++..+.+.
T Consensus 260 ~~v~~~~~g~~l~s~s-~d~~v~~wd~~~--~~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 335 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGS-LDRSVKLWNLQN--ANNKSDSKT-PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 335 (393)
T ss_dssp EEEEECTTSSEEEEEE-TTSEEEEEEC------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEe-CCCEEEEEECCC--CCCcccccC-CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 2 2222 566555554 445589999865 111100000 000000000000000001222233556667777778899
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||.+ ++
T Consensus 336 iwd~~--~~ 342 (393)
T 1erj_A 336 FWDKK--SG 342 (393)
T ss_dssp EEETT--TC
T ss_pred EEECC--CC
Confidence 99999 77
No 191
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.95 E-value=2 Score=41.54 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=65.9
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCc--eeeecCCCccccc-cceeccCCceEEECCEEEEEEcCCceEEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAV-RLTVWTPNESVCTRGMLYWITSARAYSVIGFD 226 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~-~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd 226 (373)
++||+.... ..++.+|..+++ |+.-...+..... ..........++.++.+|+.. ....+.++|
T Consensus 78 g~vyv~~~~-----------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~--~dg~l~alD 144 (677)
T 1kb0_A 78 GIMYVSASW-----------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA--WDGRLIALD 144 (677)
T ss_dssp TEEEEECGG-----------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC--TTSEEEEEE
T ss_pred CEEEEECCC-----------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc--CCCEEEEEE
Confidence 888886532 358899988876 8865543211000 000112334577889999873 457899999
Q ss_pred CCCCc--EEecccC-C-CC-CCCceeEEEECCEEEEEEeec----CCceEEEEeecCCCCCCeEEE
Q 046684 227 IESNT--WRELSAP-M-AD-RLEFATLVSRNQKLTLIGGTC----GGDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 227 ~~~~~--w~~~~~~-~-p~-~~~~~~~~~~~g~l~~~gg~~----~~~~~i~~~~~~~~~~~W~~v 283 (373)
.++++ |+.- .. . +. .......++.++.+|+..... ...+..++.++ .+..|+.-
T Consensus 145 ~~tG~~~W~~~-~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~t--G~~~W~~~ 207 (677)
T 1kb0_A 145 AATGKEVWHQN-TFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAET--GERKWRWF 207 (677)
T ss_dssp TTTCCEEEEEE-TTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT--CCEEEEEE
T ss_pred CCCCCEEeeec-CCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCC--CcEEEEec
Confidence 98764 7754 22 1 11 112223345688887754321 12245555544 44457654
No 192
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.94 E-value=1.4 Score=38.02 Aligned_cols=143 Identities=6% Similarity=-0.095 Sum_probs=68.5
Q ss_pred cEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEE
Q 046684 95 SFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEM 174 (373)
Q Consensus 95 g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~ 174 (373)
|..++.++. ...+.+||..+........+...... ..++...+ + ++.++.|+.+ ..+.+
T Consensus 54 g~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~-v~~~~~~~---~-----~~~l~s~~~d----------g~v~i 112 (368)
T 3mmy_A 54 GNFLIAGSW--ANDVRCWEVQDSGQTIPKAQQMHTGP-VLDVCWSD---D-----GSKVFTASCD----------KTAKM 112 (368)
T ss_dssp SEEEEEEET--TSEEEEEEECTTSCEEEEEEEECSSC-EEEEEECT---T-----SSEEEEEETT----------SEEEE
T ss_pred ceEEEEECC--CCcEEEEEcCCCCceeEEEeccccCC-EEEEEECc---C-----CCEEEEEcCC----------CcEEE
Confidence 355555543 46788998887332211111111111 11222211 1 4455556543 46899
Q ss_pred EECCCCceeeecCCCccccccceeccCCceEE---ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE
Q 046684 175 YDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC---TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR 251 (373)
Q Consensus 175 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~---~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~ 251 (373)
||..++.-....... ..-..+.+ -++.+.+.+ .....|..||+.+++-... ...+ .....+...
T Consensus 113 wd~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~-~~~~--~~~~~~~~~ 179 (368)
T 3mmy_A 113 WDLSSNQAIQIAQHD---------APVKTIHWIKAPNYSCVMTG-SWDKTLKFWDTRSSNPMMV-LQLP--ERCYCADVI 179 (368)
T ss_dssp EETTTTEEEEEEECS---------SCEEEEEEEECSSCEEEEEE-ETTSEEEEECSSCSSCSEE-EECS--SCEEEEEEE
T ss_pred EEcCCCCceeecccc---------CceEEEEEEeCCCCCEEEEc-cCCCcEEEEECCCCcEEEE-EecC--CCceEEEec
Confidence 999887754432221 01111222 245555553 4567799999887643222 1211 222233344
Q ss_pred CCEEEEEEeecCCceEEEEeec
Q 046684 252 NQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 252 ~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
...+++.. .+..+.+|+++.
T Consensus 180 ~~~~~~~~--~~~~i~~~~~~~ 199 (368)
T 3mmy_A 180 YPMAVVAT--AERGLIVYQLEN 199 (368)
T ss_dssp TTEEEEEE--GGGCEEEEECSS
T ss_pred CCeeEEEe--CCCcEEEEEecc
Confidence 55444433 233478999876
No 193
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.94 E-value=3.1 Score=36.66 Aligned_cols=110 Identities=7% Similarity=0.013 Sum_probs=56.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCC--cEEecccCCCCCCCce-eEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESN--TWRELSAPMADRLEFA-TLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~~~~~-~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v 283 (373)
++.+.+.| .....|..+|+... ....+ ..+.... .+... +|..++.++. +..+.+|++.. .. .+
T Consensus 217 ~~~~l~sg-s~D~~v~~wd~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~l~s~s~-D~~i~lwd~~~----~~--~~ 284 (380)
T 3iz6_a 217 NANMFISG-SCDTTVRLWDLRITSRAVRTY----HGHEGDINSVKFFPDGQRFGTGSD-DGTCRLFDMRT----GH--QL 284 (380)
T ss_dssp SCCEEEEE-ETTSCEEEEETTTTCCCCEEE----CCCSSCCCEEEECTTSSEEEEECS-SSCEEEEETTT----TE--EE
T ss_pred CCCEEEEE-ECCCeEEEEECCCCCcceEEE----CCcCCCeEEEEEecCCCeEEEEcC-CCeEEEEECCC----Cc--EE
Confidence 45666664 45677889998632 22222 1111111 22222 5666666554 44579999865 32 22
Q ss_pred EeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 284 EKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 284 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
..+....... ..........++..++.+++.+...+.+.+||.. +.
T Consensus 285 ~~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~--~~ 330 (380)
T 3iz6_a 285 QVYNREPDRN--DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL--LA 330 (380)
T ss_dssp EEECCCCSSS--CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT--TC
T ss_pred EEeccccccc--ccccCceEEEEECCCCCEEEEEECCCCEEEEECC--CC
Confidence 2221110000 0000011234444567777778888899999998 76
No 194
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.88 E-value=1.6 Score=37.49 Aligned_cols=68 Identities=12% Similarity=0.164 Sum_probs=39.9
Q ss_pred ceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCE-EEEEEcCCceEEEEEE
Q 046684 149 NFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGM-LYWITSARAYSVIGFD 226 (373)
Q Consensus 149 ~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~-ly~~gg~~~~~i~~yd 226 (373)
+.++|+.++.+ ..+.++|..+++....-..+. .......++ -+|+ +|+.. .....|..||
T Consensus 10 ~~~~~v~~~~~----------~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~d 71 (349)
T 1jmx_B 10 GHEYMIVTNYP----------NNLHVVDVASDTVYKSCVMPD-------KFGPGTAMMAPDNRTAYVLN-NHYGDIYGID 71 (349)
T ss_dssp TCEEEEEEETT----------TEEEEEETTTTEEEEEEECSS-------CCSSCEEEECTTSSEEEEEE-TTTTEEEEEE
T ss_pred CCEEEEEeCCC----------CeEEEEECCCCcEEEEEecCC-------CCCCceeEECCCCCEEEEEe-CCCCcEEEEe
Confidence 37778776543 578999998876543322221 001122222 2454 66663 4567899999
Q ss_pred CCCCcEEe
Q 046684 227 IESNTWRE 234 (373)
Q Consensus 227 ~~~~~w~~ 234 (373)
+++++...
T Consensus 72 ~~t~~~~~ 79 (349)
T 1jmx_B 72 LDTCKNTF 79 (349)
T ss_dssp TTTTEEEE
T ss_pred CCCCcEEE
Confidence 99876543
No 195
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.87 E-value=3 Score=36.33 Aligned_cols=177 Identities=12% Similarity=0.042 Sum_probs=83.6
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...+.+||..+++.... +.... ..+..+......+ ++.++.|+.+ ..+.+||.++++....
T Consensus 175 D~~v~lwd~~~~~~~~~--~~~h~--~~v~~~~~~~~~~-----g~~l~sgs~D----------g~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQS--FHGHG--ADVLCLDLAPSET-----GNTFVSGGCD----------KKAMVWDMRSGQCVQA 235 (354)
T ss_dssp TSEEEEEETTTCCEEEE--EECCS--SCEEEEEECCCSS-----CCEEEEEETT----------SCEEEEETTTCCEEEE
T ss_pred CCcEEEEeCCCCeEEEE--EcCCC--CCeEEEEEEeCCC-----CCEEEEEeCC----------CeEEEEECCCCcEEEE
Confidence 46788999988764321 11111 1121121111111 4566666654 4688999888764322
Q ss_pred cCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeec
Q 046684 186 GSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTC 262 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~ 262 (373)
-.. +. ..-..+++. +|...+.+ .....+..||+.+++-... ............+. .+|.+.+.++ .
T Consensus 236 ~~~-------h~-~~v~~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~~~~~-~~~~~~~~~~~~~~~s~~g~~l~~g~-~ 304 (354)
T 2pbi_B 236 FET-------HE-SDVNSVRYYPSGDAFASG-SDDATCRLYDLRADREVAI-YSKESIIFGASSVDFSLSGRLLFAGY-N 304 (354)
T ss_dssp ECC-------CS-SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEE-ECCTTCCSCEEEEEECTTSSEEEEEE-T
T ss_pred ecC-------CC-CCeEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEE-EcCCCcccceeEEEEeCCCCEEEEEE-C
Confidence 111 00 000111221 45555554 3466788999987653332 11111111222222 2566666654 4
Q ss_pred CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEE
Q 046684 263 GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 263 ~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd 327 (373)
+..+.+|++.. . +.+..+..-. .......+..++..++.++.++.+.+|+
T Consensus 305 d~~i~vwd~~~----~--~~~~~l~~h~---------~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 305 DYTINVWDVLK----G--SRVSILFGHE---------NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSCEEEEETTT----C--SEEEEECCCS---------SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCcEEEEECCC----C--ceEEEEECCC---------CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 45589999854 2 2333332100 0001222333566666676666677664
No 196
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.86 E-value=2.8 Score=35.93 Aligned_cols=201 Identities=8% Similarity=-0.007 Sum_probs=101.6
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCC-CCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCC-------
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNV-SRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGG------- 165 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~------- 165 (373)
+|.||+.... ..+.++|+.+++.+.+..... ........+..++ .+ +++|+...........
T Consensus 91 ~g~l~v~d~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~--~~-----G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 91 NNQLYIVDCY---YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQ--RT-----GIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp TTEEEEEETT---TEEEEECTTCEECEEEESEETTEECSCEEEEEECT--TT-----CCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCcEEEEECC---CCEEEEeCCCCEEEEecccCCCCcccccceEEEec--CC-----CEEEEECCcccccccccceehcc
Confidence 6889988652 458899999877655532211 1111111222221 01 6788864211000000
Q ss_pred CcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CC-EEEEEEcCCceEEEEEECCCC---cEEecccCCC
Q 046684 166 ATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RG-MLYWITSARAYSVIGFDIESN---TWRELSAPMA 240 (373)
Q Consensus 166 ~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g-~ly~~gg~~~~~i~~yd~~~~---~w~~~~~~~p 240 (373)
......+++||+.+++.+.+..- .......++- +| .+|+.. .....|.+||+..+ +.+.+ ...+
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~---------~~~p~gia~~~dg~~lyv~d-~~~~~I~~~~~~~~~~~~~~~~-~~~~ 229 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKE---------LHVPGGAEVSADSSFVLVAE-FLSHQIVKYWLEGPKKGTAEVL-VKIP 229 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEE---------ESCCCEEEECTTSSEEEEEE-GGGTEEEEEESSSTTTTCEEEE-EECS
T ss_pred cCCCceEEEEeCCCCEEEEeccC---------CccCcceEECCCCCEEEEEe-CCCCeEEEEECCCCcCCccceE-EeCC
Confidence 01225689999987765543210 0111222332 34 478773 34578999998853 34443 2222
Q ss_pred CCCCceeEEE-ECCEEEEEEeec-------CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCE
Q 046684 241 DRLEFATLVS-RNQKLTLIGGTC-------GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGA 312 (373)
Q Consensus 241 ~~~~~~~~~~-~~g~l~~~gg~~-------~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (373)
. -.+++. -+|.||+..... .....|+.++. + .+-......+.... ......++..++.
T Consensus 230 g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~--~-G~~~~~~~~~~g~~--------~~~~~~~~~~~g~ 295 (322)
T 2fp8_A 230 N---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE--F-GNILEVIPLPPPFA--------GEHFEQIQEHDGL 295 (322)
T ss_dssp S---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT--T-SCEEEEEECCTTTT--------TSCCCEEEEETTE
T ss_pred C---CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC--C-CCEEEEEECCCCCc--------cccceEEEEeCCE
Confidence 1 122332 367898887541 11235666664 2 33222223332210 0013445557899
Q ss_pred EEEEEcCCccEEEEEcc
Q 046684 313 ICLYREVGLGMIIWRED 329 (373)
Q Consensus 313 i~~~~~~~~~~~~yd~~ 329 (373)
||+.+...+.+.+|+++
T Consensus 296 L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 296 LYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEECSSCSEEEEEEC-
T ss_pred EEEeecCCCceEEEecc
Confidence 99987777789999988
No 197
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.83 E-value=0.54 Score=41.54 Aligned_cols=146 Identities=8% Similarity=0.086 Sum_probs=66.9
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEE----CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCc
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT----RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEF 245 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~----~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~ 245 (373)
..+.+||..++.-......+.. ....... ++.+.+. +.....+..||+.+.+-... +......
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~~~~~~~---~~~~~~~ 188 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEET---------VYSHHMSPVSTKHCLVAV-GTRGPKVQLCDLKSGSCSHI---LQGHRQE 188 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSC---------EEEEEECSSCSSCCEEEE-EESSSSEEEEESSSSCCCEE---ECCCCSC
T ss_pred CeEEEeeCCCCccceeccCCCc---------eeeeEeecCCCCCcEEEE-EcCCCeEEEEeCCCcceeee---ecCCCCc
Confidence 4688999887664333222110 0011111 2334444 34566789999987643222 1111111
Q ss_pred e-eEEEE-CCE-EEEEEeecCCceEEEEeecCCCCCCeEEEEeechhh---hhhhcCCCCCCCceEEEecCCEEEEEEcC
Q 046684 246 A-TLVSR-NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEM---GMRLSGGKASWGGTRCAAGNGAICLYREV 319 (373)
Q Consensus 246 ~-~~~~~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 319 (373)
. .+... ++. +++.++ .+..+.+|++.. .......+....... ...............+...++..++.++.
T Consensus 189 v~~~~~~~~~~~ll~~~~-~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 189 ILAVSWSPRYDYILATAS-ADSRVKLWDVRR--ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEEEECSSCTTEEEEEE-TTSCEEEEETTC--SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCcEEEEEc-CCCcEEEEECCC--CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 2 22222 344 555554 444579999875 222222221100000 00000000011012222335666667777
Q ss_pred CccEEEEEccccCC
Q 046684 320 GLGMIIWREDEDKR 333 (373)
Q Consensus 320 ~~~~~~yd~~~~~~ 333 (373)
.+.+.+||+. ++
T Consensus 266 dg~i~vwd~~--~~ 277 (408)
T 4a11_B 266 DNRMRLWNSS--NG 277 (408)
T ss_dssp TSCEEEEETT--TC
T ss_pred CCeEEEEECC--CC
Confidence 7789999999 76
No 198
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.81 E-value=0.52 Score=42.60 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=53.1
Q ss_pred CCEEEEEEcCCceEEEEEECCCCc-EEecccCCCCCCCceeEEEE--CCE-EEEEEeecCCceEEEEeecCCCCCCeEEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESNT-WRELSAPMADRLEFATLVSR--NQK-LTLIGGTCGGDACVWELSEGGDDDIWCLI 283 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~-w~~~~~~~p~~~~~~~~~~~--~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~~v 283 (373)
++.+++.+ .....|..||+.+.. ...+ ............+.. ++. +++.++. +..+.+|++.. ....-..+
T Consensus 243 ~~~~l~s~-~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~i~~~p~~~~~l~tg~~-dg~v~vwd~~~--~~~~~~~~ 317 (430)
T 2xyi_A 243 HESLFGSV-ADDQKLMIWDTRNNNTSKPS-HTVDAHTAEVNCLSFNPYSEFILATGSA-DKTVALWDLRN--LKLKLHSF 317 (430)
T ss_dssp CTTEEEEE-ETTSEEEEEETTCSCSSSCS-EEEECCSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTC--TTSCSEEE
T ss_pred CCCEEEEE-eCCCeEEEEECCCCCCCcce-eEeecCCCCeEEEEeCCCCCCEEEEEeC-CCeEEEEeCCC--CCCCeEEe
Confidence 34555553 456789999998653 1111 111111122222222 343 6666654 44589999865 12211111
Q ss_pred EeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 284 EKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 284 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
....... ........+..+++.++..+.+.+||+.
T Consensus 318 ~~h~~~v-----------~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 318 ESHKDEI-----------FQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp ECCSSCE-----------EEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred ecCCCCE-----------EEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 1111111 0122222345688888888889999998
No 199
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.80 E-value=3.8 Score=38.43 Aligned_cols=133 Identities=6% Similarity=0.025 Sum_probs=68.5
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT 247 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~ 247 (373)
..+.+||..++.... ..+.. .......+.+ +|.+.+.+ .....+..||+.+.+-... .... +.....
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~-------~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw~~~~~~~~~~-~~~~-h~~~v~ 535 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTP-------LRAKPSYISISPSETYIAAG-DVMGKILLYDLQSREVKTS-RWAF-RTSKIN 535 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSC-------CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEC-CSCC-CSSCEE
T ss_pred CeEEEEECCCccccc-cccCC-------ccCceEEEEECCCCCEEEEc-CCCCeEEEeeCCCCcceeE-eecC-CCCcee
Confidence 358889988765532 22210 0011111222 56666664 3467799999987755433 1110 222222
Q ss_pred EEEE------------CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEE
Q 046684 248 LVSR------------NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICL 315 (373)
Q Consensus 248 ~~~~------------~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 315 (373)
.+.. ++++++.++ .+..+.+|+++. .. ..+..+..-. ..........++. ++
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~----~~-~~~~~~~~h~---------~~v~~l~~s~~~~-l~ 599 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGS-LDTNIFIYSVKR----PM-KIIKALNAHK---------DGVNNLLWETPST-LV 599 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEE-TTSCEEEEESSC----TT-CCEEETTSST---------TCEEEEEEEETTE-EE
T ss_pred EEEEcCccccccccccCCCEEEEEc-CCCcEEEEECCC----Cc-eechhhhcCc---------cceEEEEEcCCCC-eE
Confidence 2222 566666654 444589999975 21 2222221110 0002233344667 77
Q ss_pred EEcCCccEEEEEcc
Q 046684 316 YREVGLGMIIWRED 329 (373)
Q Consensus 316 ~~~~~~~~~~yd~~ 329 (373)
.++..+.+.+||++
T Consensus 600 s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 600 SSGADACIKRWNVV 613 (615)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EecCCceEEEEeee
Confidence 77777789999987
No 200
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.78 E-value=2.8 Score=35.61 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=21.6
Q ss_pred cCCEEEEEEcCCccEEEEEccccCCcccEEEecc
Q 046684 309 GNGAICLYREVGLGMIIWREDEDKRKWEWVWVGG 342 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~ 342 (373)
.++.+++.++.++.+.+||.+ +++ .|..+..
T Consensus 316 ~~~~~l~s~~~dg~v~iw~~~--~~~-~~~~~~~ 346 (351)
T 3f3f_A 316 LTGTILSSAGDDGKVRLWKAT--YSN-EFKCMSV 346 (351)
T ss_dssp SSSCCEEEEETTSCEEEEEEC--TTS-CEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEecC--cCc-chhheee
Confidence 356677777777889999998 631 5665544
No 201
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.68 E-value=1.4 Score=38.10 Aligned_cols=21 Identities=5% Similarity=0.093 Sum_probs=17.3
Q ss_pred CEEEEEEcCCccEEEEEccccCC
Q 046684 311 GAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 311 ~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+.+++.++..+.+.+||.+ ++
T Consensus 299 ~~~l~~~~~dg~i~vwd~~--~~ 319 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLE--VE 319 (366)
T ss_dssp SSEEEEECTTSCEEEEECC--SS
T ss_pred CcEEEEEecCCcEEEEECC--CC
Confidence 6677778777889999999 76
No 202
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.56 E-value=3.5 Score=35.97 Aligned_cols=185 Identities=7% Similarity=-0.028 Sum_probs=87.2
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
++.+.+.++. ...+.+||..+++....-..+. ...++...+ ..+++.. + ..+.
T Consensus 70 ~~~~~~~~~~--d~~v~iWd~~~~~~~~~~~~~~----~v~~v~~~~---------~~~~~~~--~----------~~i~ 122 (355)
T 3vu4_A 70 TNYVAFVTGV--KEVVHIWDDVKKQDVSRIKVDA----PVKDLFLSR---------EFIVVSY--G----------DVIS 122 (355)
T ss_dssp SSEEEEECSS--TTEEEEEETTTTEEEEEEECSS----CEEEEEECS---------SEEEEEE--T----------TEEE
T ss_pred CCEEEEEECC--ccEEEEEECCCCcEEEEEECCC----ceEEEEEcC---------CEEEEEE--c----------CEEE
Confidence 4555555543 3589999999886533111111 111222211 3444432 1 2588
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCc-EEe-------------cccCC
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNT-WRE-------------LSAPM 239 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~-w~~-------------~~~~~ 239 (373)
+||..++. +.+..+. .. ....++..+.+-+..|.....|..+|+.+++ +.. + ..+
T Consensus 123 i~d~~~~~-~~~~~~~-------~~--~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~-~~~ 191 (355)
T 3vu4_A 123 VFKFGNPW-KRITDDI-------RF--GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKG-VLI 191 (355)
T ss_dssp EEESSTTC-CBSSCCE-------EE--EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CC-EEE
T ss_pred EEECCCCc-eeeEEec-------cC--CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCccc-EEE
Confidence 99987651 2222221 00 0011122233333325566788999988653 100 1 111
Q ss_pred CCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEE
Q 046684 240 ADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYR 317 (373)
Q Consensus 240 p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
..+......+.. +|++++.++.++..+.+|++.. .+.+..+...... ..........++..++.+
T Consensus 192 ~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~------~~~~~~~~~g~h~-------~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 192 KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED------GVLVREFRRGLDR-------ADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT------CCEEEEEECTTCC-------SCEEEEEECTTSCEEEEE
T ss_pred EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCCCC-------CcEEEEEECCCCCEEEEE
Confidence 122222222222 6666666654443289999854 2344444311000 000122333467777778
Q ss_pred cCCccEEEEEcc
Q 046684 318 EVGLGMIIWRED 329 (373)
Q Consensus 318 ~~~~~~~~yd~~ 329 (373)
+..+.+.+||++
T Consensus 259 s~d~~v~iw~~~ 270 (355)
T 3vu4_A 259 SDKWTLHVFEIF 270 (355)
T ss_dssp ETTCEEEEEESS
T ss_pred ECCCEEEEEEcc
Confidence 777889999987
No 203
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.34 E-value=0.72 Score=47.96 Aligned_cols=144 Identities=10% Similarity=0.051 Sum_probs=70.2
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
+.+|..++.++. ...+.+||..+++...+..... ....+...+ + .+++. ++.+ ..
T Consensus 1012 s~dg~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~---~-----~~l~~-~~~d----------g~ 1066 (1249)
T 3sfz_A 1012 TADGKTLISSSE--DSVIQVWNWQTGDYVFLQAHQE----TVKDFRLLQ---D-----SRLLS-WSFD----------GT 1066 (1249)
T ss_dssp CSSSSCEEEECS--SSBEEEEETTTTEEECCBCCSS----CEEEEEECS---S-----SEEEE-EESS----------SE
T ss_pred CCCCCEEEEEcC--CCEEEEEECCCCceEEEecCCC----cEEEEEEcC---C-----CcEEE-EECC----------Cc
Confidence 335544444443 4679999999987765432211 111121111 1 55544 4333 36
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee-EE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT-LV 249 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~-~~ 249 (373)
+.+||..+++-...-.. +.. ....+++ -+|...+.+ .....+..||..+.+- + ..+..+..... ++
T Consensus 1067 v~vwd~~~~~~~~~~~~-------~~~-~v~~~~~s~d~~~l~s~-s~d~~v~iwd~~~~~~--~-~~l~~h~~~v~~~~ 1134 (1249)
T 3sfz_A 1067 VKVWNVITGRIERDFTC-------HQG-TVLSCAISSDATKFSST-SADKTAKIWSFDLLSP--L-HELKGHNGCVRCSA 1134 (1249)
T ss_dssp EEEEETTTTCCCEEEEC-------CSS-CCCCEEECSSSSSCEEE-CCSSCCCEECSSSSSC--S-BCCCCCSSCEEEEE
T ss_pred EEEEECCCCceeEEEcc-------cCC-cEEEEEECCCCCEEEEE-cCCCcEEEEECCCcce--e-eeeccCCCcEEEEE
Confidence 88999887653211110 000 1111122 245555553 3456688888876542 2 12222222222 22
Q ss_pred -EECCEEEEEEeecCCceEEEEeec
Q 046684 250 -SRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 250 -~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
.-+|++.+.++.+ ..+.+|++..
T Consensus 1135 ~s~dg~~lat~~~d-g~i~vwd~~~ 1158 (1249)
T 3sfz_A 1135 FSLDGILLATGDDN-GEIRIWNVSD 1158 (1249)
T ss_dssp ECSSSSEEEEEETT-SCCCEEESSS
T ss_pred ECCCCCEEEEEeCC-CEEEEEECCC
Confidence 2266666666543 4478999875
No 204
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.29 E-value=3.3 Score=34.89 Aligned_cols=103 Identities=10% Similarity=0.039 Sum_probs=55.5
Q ss_pred EEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhh
Q 046684 211 LYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEM 290 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~ 290 (373)
+....+.....+..+|..+..-... ...............++.+++..|..+..+.+|++.. .+.+..+..-.
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~------~~~~~~l~gH~ 284 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT------MAKVAELKGHT 284 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT------CCEEEEECCCS
T ss_pred EEEEecCCCCEEEEEeccccccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC------CcEEEEEcCCC
Confidence 3444455567788889887765444 2221111111111224556655565556689998854 34555543200
Q ss_pred hhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 291 GMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
......+...++.+++.++.++.+.+||+.
T Consensus 285 ---------~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 285 ---------SRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp ---------SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ---------CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 000122233466777778887789999886
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.27 E-value=6.2 Score=38.07 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=54.3
Q ss_pred cceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcC--CceEEEEEECCCCc---EEecccCCCCCC
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA--RAYSVIGFDIESNT---WRELSAPMADRL 243 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~--~~~~i~~yd~~~~~---w~~~~~~~p~~~ 243 (373)
...+++++..++.|+.+..-.. .....+..+|.+|+.... ....|+.+|+++.+ |+.+ .+.....
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~---------~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~ 320 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVG---------AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEI-VPEDSSA 320 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSS---------CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE-ECCCSSC
T ss_pred ceEEEEEcCCCCceEEeecCCC---------ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEE-ecCCCCC
Confidence 4567788777777877754311 111223356666666421 35789999997754 8877 4432122
Q ss_pred CceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 244 EFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 244 ~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
.-..+...++.|++....++. ..+|.++.
T Consensus 321 ~l~~~~~~~~~lv~~~~~dg~-~~l~~~~~ 349 (695)
T 2bkl_A 321 SLLSVSIVGGHLSLEYLKDAT-SEVRVATL 349 (695)
T ss_dssp EEEEEEEETTEEEEEEEETTE-EEEEEEET
T ss_pred eEEEEEEECCEEEEEEEECCE-EEEEEEeC
Confidence 112334448888877654443 47777764
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.06 E-value=3.5 Score=34.63 Aligned_cols=234 Identities=8% Similarity=-0.065 Sum_probs=107.5
Q ss_pred eeEEEEeCCCCC--ccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccc--eeccCCCCCCCCCCeEEEEE
Q 046684 63 LCCYVHNPVSDK--WHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQ--FRYLPLLNVSRTNPAVGIVM 138 (373)
Q Consensus 63 ~~~~~~d~~~~~--w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~--w~~lp~~~~~~~~~~~~~~~ 138 (373)
..+.++|+.+.+ |..- ............+.+|.+++ .. ...+..+|| +++ |+--.+ .......+...
T Consensus 15 ~~v~~~d~~tG~~~w~~~-~~~~~~~~~~~~~pdG~ilv-s~---~~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~- 85 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILF-SY---SKGAKMITR-DGRELWNIAAP--AGCEMQTARIL- 85 (276)
T ss_dssp SEEEEEETTTTEEEEEEE-CCTTCCCCEEEECTTSCEEE-EC---BSEEEEECT-TSCEEEEEECC--TTCEEEEEEEC-
T ss_pred CEEEEEECCCCeEEEEeC-CCccCCCcCeEECCCCCEEE-eC---CCCEEEECC-CCCEEEEEcCC--CCccccccEEC-
Confidence 566678886653 4432 11111223334455777777 33 467999999 665 443221 11111111111
Q ss_pred cCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc-eeeecC--CCccccccceeccCCceEEECCEEEEEE
Q 046684 139 EGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA-WQIIGS--MPVEFAVRLTVWTPNESVCTRGMLYWIT 215 (373)
Q Consensus 139 ~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~--~p~~~~~~~~~~~~~~~~~~~g~ly~~g 215 (373)
.+ +++++..... ...+..+|+..+. |+.... .+.. + ..........+|.+++.
T Consensus 86 ----~d-----G~~lv~~~~~---------~~~v~~vd~~Gk~l~~~~~~~~~~~~----~-~~~~~v~~~~~G~~lv~- 141 (276)
T 3no2_A 86 ----PD-----GNALVAWCGH---------PSTILEVNMKGEVLSKTEFETGIERP----H-AQFRQINKNKKGNYLVP- 141 (276)
T ss_dssp ----TT-----SCEEEEEEST---------TEEEEEECTTSCEEEEEEECCSCSSG----G-GSCSCCEECTTSCEEEE-
T ss_pred ----CC-----CCEEEEecCC---------CCEEEEEeCCCCEEEEEeccCCCCcc----c-ccccCceECCCCCEEEE-
Confidence 11 5555554221 1356777874432 443211 1110 1 01111123346776666
Q ss_pred cCCceEEEEEECCCC-cEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe-echhhhhh
Q 046684 216 SARAYSVIGFDIESN-TWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK-VPIEMGMR 293 (373)
Q Consensus 216 g~~~~~i~~yd~~~~-~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~-~p~~~~~~ 293 (373)
......+.+||++-+ .|+.- .+. .........+|.+++++.. +..+..+++++ .+..|+.-.. ++...+.
T Consensus 142 ~~~~~~v~~~d~~G~~~w~~~-~~~---~~~~~~~~~~g~~~v~~~~-~~~v~~~d~~t--G~~~w~~~~~~~~~~~l~- 213 (276)
T 3no2_A 142 LFATSEVREIAPNGQLLNSVK-LSG---TPFSSAFLDNGDCLVACGD-AHCFVQLNLES--NRIVRRVNANDIEGVQLF- 213 (276)
T ss_dssp ETTTTEEEEECTTSCEEEEEE-CSS---CCCEEEECTTSCEEEECBT-TSEEEEECTTT--CCEEEEEEGGGSBSCCCS-
T ss_pred ecCCCEEEEECCCCCEEEEEE-CCC---CccceeEcCCCCEEEEeCC-CCeEEEEeCcC--CcEEEEecCCCCCCcccc-
Confidence 345678999999833 35543 221 1111222336777776543 22344444433 2334554311 1111110
Q ss_pred hcCCCCCCCceEEEecCCEEEEEE--cC--------CccEEEEEccccCCcccEEEecccccCCC
Q 046684 294 LSGGKASWGGTRCAAGNGAICLYR--EV--------GLGMIIWREDEDKRKWEWVWVGGCCLTGG 348 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~i~~~~--~~--------~~~~~~yd~~~~~~~~~W~~~~~~~~~~~ 348 (373)
.........++.+|+.. +. ...++..|+ ++++.|+.- ..+..+.
T Consensus 214 -------~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~---~g~~~W~~~-~~~~~~~ 267 (276)
T 3no2_A 214 -------FVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS---EGKVVWQLN-DKVKFGM 267 (276)
T ss_dssp -------EEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT---TSBEEEEEC-CTTTSCC
T ss_pred -------ccccceEcCCCCEEEEeccCccccccccCCceEEEECC---CCCEEEEec-Ccccccc
Confidence 00233444588899887 32 223555555 455678743 3333333
No 207
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.02 E-value=5.1 Score=38.61 Aligned_cols=147 Identities=11% Similarity=0.120 Sum_probs=72.5
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceee-ecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~ 227 (373)
+++++.|+.+ ..+.+||..++.-.. +.... ..-..+++. +|...+.+ .....|..+|.
T Consensus 442 g~~l~sgs~D----------g~v~vwd~~~~~~~~~~~~h~---------~~v~~~~~s~~~~~l~s~-s~D~~i~iwd~ 501 (694)
T 3dm0_A 442 GQFALSGSWD----------GELRLWDLAAGVSTRRFVGHT---------KDVLSVAFSLDNRQIVSA-SRDRTIKLWNT 501 (694)
T ss_dssp SSEEEEEETT----------SEEEEEETTTTEEEEEEECCS---------SCEEEEEECTTSSCEEEE-ETTSCEEEECT
T ss_pred CCEEEEEeCC----------CcEEEEECCCCcceeEEeCCC---------CCEEEEEEeCCCCEEEEE-eCCCEEEEEEC
Confidence 5566666654 468899987764221 11110 000111221 34444443 34567888887
Q ss_pred CCCcEEecccCCCCCCCceeEEEE--CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCce
Q 046684 228 ESNTWRELSAPMADRLEFATLVSR--NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGT 304 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~--~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 304 (373)
..+.-..+......+......+.. ++ .-+++.+..+..+.+|++.. .+ .+..+..-. .....
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~----~~--~~~~~~~h~---------~~v~~ 566 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN----CK--LRSTLAGHT---------GYVST 566 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT----CC--EEEEECCCS---------SCEEE
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC----Cc--EEEEEcCCC---------CCEEE
Confidence 655433331122222222222322 22 22344444555689999865 32 222222110 00012
Q ss_pred EEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 305 RCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 305 ~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.+...++.+++.++..+.+.+||+. ++
T Consensus 567 v~~spdg~~l~sg~~Dg~i~iwd~~--~~ 593 (694)
T 3dm0_A 567 VAVSPDGSLCASGGKDGVVLLWDLA--EG 593 (694)
T ss_dssp EEECTTSSEEEEEETTSBCEEEETT--TT
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECC--CC
Confidence 3333467778888888889999999 77
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.82 E-value=4.3 Score=34.94 Aligned_cols=188 Identities=10% Similarity=-0.047 Sum_probs=93.4
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
++.+|+.+.. ...++++|+.+++.+.+.. +. ...+++...+ +++++.. . ..+.
T Consensus 60 ~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~d----------g~l~v~~--~----------~gl~ 112 (326)
T 2ghs_A 60 SGTAWWFNIL--ERELHELHLASGRKTVHAL-PF--MGSALAKISD----------SKQLIAS--D----------DGLF 112 (326)
T ss_dssp TTEEEEEEGG--GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEET----------TEEEEEE--T----------TEEE
T ss_pred CCEEEEEECC--CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCC----------CeEEEEE--C----------CCEE
Confidence 4677776643 4579999999887654422 11 1112222221 6676643 1 2489
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcC-----CceEEEEEECCCCcEEecccCCCCCCCce
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSA-----RAYSVIGFDIESNTWRELSAPMADRLEFA 246 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~-----~~~~i~~yd~~~~~w~~~~~~~p~~~~~~ 246 (373)
+||..+++.+.+...+... ...+ .....+ +|.+|+.... ....|+.+| +++...+ .. .. ....
T Consensus 113 ~~d~~~g~~~~~~~~~~~~---~~~~--~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~-~~-~~-~~~~ 182 (326)
T 2ghs_A 113 LRDTATGVLTLHAELESDL---PGNR--SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL-FA-DI-SIPN 182 (326)
T ss_dssp EEETTTCCEEEEECSSTTC---TTEE--EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE-EE-EE-SSEE
T ss_pred EEECCCCcEEEEeeCCCCC---CCCC--CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe-eC-CC-cccC
Confidence 9999988887664432110 0001 111222 5777765321 246799999 4666554 11 11 1112
Q ss_pred eEEEE-CC-EEEEEEeecCCceEEEEeecCCCCC-Ce---EEEEeechhhhhhhcCCCCCCCceEE-EecCCEEEEEEcC
Q 046684 247 TLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDD-IW---CLIEKVPIEMGMRLSGGKASWGGTRC-AAGNGAICLYREV 319 (373)
Q Consensus 247 ~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~-~W---~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 319 (373)
+++.. +| .||+... ....+.+|+++. ++. .. ..+..++.... .+..+ ...++.||+....
T Consensus 183 ~i~~s~dg~~lyv~~~-~~~~I~~~d~~~--~~Gl~~~~~~~~~~~~~~~~----------~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDT-KVNRLMRVPLDA--RTGLPTGKAEVFIDSTGIKG----------GMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp EEEECTTSCEEEEEET-TTCEEEEEEBCT--TTCCBSSCCEEEEECTTSSS----------EEEEEEECTTSCEEEEEET
T ss_pred CeEEcCCCCEEEEEEC-CCCEEEEEEccc--ccCCcccCceEEEECCCCCC----------CCCeeEECCCCCEEEEEeC
Confidence 33333 45 4666643 233355666541 112 21 11122211000 01223 3346788887655
Q ss_pred CccEEEEEccccCC
Q 046684 320 GLGMIIWREDEDKR 333 (373)
Q Consensus 320 ~~~~~~yd~~~~~~ 333 (373)
.+.+.+||++ .+
T Consensus 250 ~~~v~~~d~~--g~ 261 (326)
T 2ghs_A 250 EGAVDRYDTD--GN 261 (326)
T ss_dssp TTEEEEECTT--CC
T ss_pred CCEEEEECCC--CC
Confidence 5679999997 55
No 209
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.80 E-value=4.1 Score=34.67 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=49.7
Q ss_pred cCCceEEEEEECCCCcEEecccCCCCCCCce-eEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhh
Q 046684 216 SARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMR 293 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~ 293 (373)
+.....+..||..+.+.... ... ..... .++. -+|++++.++. +..+.+|++.. ...+..+.....
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~-~~~--h~~~v~~~~~s~~~~~l~s~s~-Dg~i~iwd~~~------~~~~~~~~~~~~-- 258 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTN-HIG--HTGYLNTVTVSPDGSLCASGGK-DGQAMLWDLNE------GKHLYTLDGGDI-- 258 (340)
T ss_dssp EETTSCEEEEETTTTEEEEE-ECC--CSSCEEEEEECTTSSEEEEEET-TCEEEEEETTT------TEEEEEEECSSC--
T ss_pred EcCCCEEEEEECCCCceeeE-ecC--CCCcEEEEEECCCCCEEEEEeC-CCeEEEEEecc------CceeeeecCCce--
Confidence 34456788899988765433 111 11112 2222 25666666553 44578998854 344444332210
Q ss_pred hcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 294 LSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...+....+..++.++..+.+.+||.+ ++
T Consensus 259 ---------v~~~~~~~~~~~~~~~~d~~i~iwd~~--~~ 287 (340)
T 4aow_A 259 ---------INALCFSPNRYWLCAATGPSIKIWDLE--GK 287 (340)
T ss_dssp ---------EEEEEECSSSSEEEEEETTEEEEEETT--TT
T ss_pred ---------EEeeecCCCCceeeccCCCEEEEEECC--CC
Confidence 122223333334445556679999998 76
No 210
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.78 E-value=3.8 Score=34.31 Aligned_cols=101 Identities=7% Similarity=0.009 Sum_probs=49.8
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
++...+.+ .....+..||.... -..+ ..........+ ..-++. ++.+ ..+..+.+|++.. . +.+..+
T Consensus 154 ~~~~l~~~-~~d~~i~i~d~~~~-~~~~--~~~~~~~i~~~~~~~~~~-~~~~-~~dg~i~i~d~~~----~--~~~~~~ 221 (313)
T 3odt_A 154 SENKFLTA-SADKTIKLWQNDKV-IKTF--SGIHNDVVRHLAVVDDGH-FISC-SNDGLIKLVDMHT----G--DVLRTY 221 (313)
T ss_dssp TTTEEEEE-ETTSCEEEEETTEE-EEEE--CSSCSSCEEEEEEEETTE-EEEE-ETTSEEEEEETTT----C--CEEEEE
T ss_pred CCCEEEEE-ECCCCEEEEecCce-EEEE--eccCcccEEEEEEcCCCe-EEEc-cCCCeEEEEECCc----h--hhhhhh
Confidence 45555553 34567888883322 2222 11111111222 234666 4443 4455588998864 2 233333
Q ss_pred chhhhhhhcCCCCCCCceEEEec-CCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAG-NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...... ...+... ++. ++.++..+.+.+||++ ++
T Consensus 222 ~~~~~~----------i~~~~~~~~~~-l~~~~~dg~v~iwd~~--~~ 256 (313)
T 3odt_A 222 EGHESF----------VYCIKLLPNGD-IVSCGEDRTVRIWSKE--NG 256 (313)
T ss_dssp ECCSSC----------EEEEEECTTSC-EEEEETTSEEEEECTT--TC
T ss_pred hcCCce----------EEEEEEecCCC-EEEEecCCEEEEEECC--CC
Confidence 211000 1223332 444 5567777789999999 77
No 211
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=92.63 E-value=2.1 Score=36.52 Aligned_cols=170 Identities=10% Similarity=0.171 Sum_probs=82.5
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccc-eeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQ-FRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~-w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
.+|.|++... . ++.+|+..+. |.. +...... ....+.. +.||+.. .+ ..
T Consensus 69 ~~g~l~v~t~----~-l~~~d~~g~~~~~~-~~~~~~~--~~~~~~~-----------~~l~v~t-~~----------~~ 118 (330)
T 3hxj_A 69 KDGTIYFGSD----K-VYAINPDGTEKWRF-DTKKAIV--SDFTIFE-----------DILYVTS-MD----------GH 118 (330)
T ss_dssp TTTEECCSSC----E-EEEECCCGGGGGGS-CC-------CCEEEET-----------TEEEEEC-TT----------SE
T ss_pred cCCcEEEecC----c-EEEECCCCcEEEEE-ECCCCcc--cCceEEC-----------CEEEEEe-cC----------CE
Confidence 4788887543 3 9999984333 332 2111111 1122222 7777643 21 35
Q ss_pred EEEEECC-CCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCC-cEEecccCCCCCCCceeE
Q 046684 172 VEMYDSR-HDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESN-TWRELSAPMADRLEFATL 248 (373)
Q Consensus 172 ~~~yd~~-~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~-~w~~~~~~~p~~~~~~~~ 248 (373)
+..||.. ...|+.....+ .....+.. +|.+|+. .....+.+||++.+ .|..- .+ .... ..+
T Consensus 119 l~~~d~~g~~~~~~~~~~~----------~~~~~~~~~~g~l~vg--t~~~~l~~~d~~g~~~~~~~-~~--~~~~-~~~ 182 (330)
T 3hxj_A 119 LYAINTDGTEKWRFKTKKA----------IYATPIVSEDGTIYVG--SNDNYLYAINPDGTEKWRFK-TN--DAIT-SAA 182 (330)
T ss_dssp EEEECTTSCEEEEEECSSC----------CCSCCEECTTSCEEEE--CTTSEEEEECTTSCEEEEEE-CS--SCCC-SCC
T ss_pred EEEEcCCCCEEEEEcCCCc----------eeeeeEEcCCCEEEEE--cCCCEEEEECCCCCEeEEEe-cC--CCce-eee
Confidence 7889887 22366543221 11222333 6777765 34578999999832 25433 22 2222 223
Q ss_pred EE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEE
Q 046684 249 VS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWR 327 (373)
Q Consensus 249 ~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd 327 (373)
+. .+|.|++.. ..+..++ .. ....|+... +.... ...+...++.||+.. ..+.+..||
T Consensus 183 ~~d~~g~l~v~t----~~l~~~d-~~--g~~~~~~~~--~~~~~-----------~~~~~~~~g~l~v~t-~~~gl~~~~ 241 (330)
T 3hxj_A 183 SIGKDGTIYFGS----DKVYAIN-PD--GTEKWNFYA--GYWTV-----------TRPAISEDGTIYVTS-LDGHLYAIN 241 (330)
T ss_dssp EECTTCCEEEES----SSEEEEC-TT--SCEEEEECC--SSCCC-----------SCCEECTTSCEEEEE-TTTEEEEEC
T ss_pred EEcCCCEEEEEe----CEEEEEC-CC--CcEEEEEcc--CCcce-----------eceEECCCCeEEEEc-CCCeEEEEC
Confidence 33 467777654 3344454 22 234454321 11100 122333455777754 334688888
Q ss_pred cc
Q 046684 328 ED 329 (373)
Q Consensus 328 ~~ 329 (373)
..
T Consensus 242 ~~ 243 (330)
T 3hxj_A 242 PD 243 (330)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 212
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.60 E-value=5.7 Score=35.87 Aligned_cols=204 Identities=7% Similarity=-0.083 Sum_probs=100.6
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
.+|.||+.... ..+.++|+.+++.+.+.. ....+....+ +..+ ..||+..... ......+
T Consensus 148 ~~g~Lyv~d~~---~~I~~id~~~~~v~~~~~---~~~~P~~ia~-d~~G-------~~lyvad~~~------~~~~~~v 207 (430)
T 3tc9_A 148 NHNHLYLVGEQ---HPTRLIDFEKEYVSTVYS---GLSKVRTICW-THEA-------DSMIITNDQN------NNDRPNN 207 (430)
T ss_dssp EEEEEEEEEBT---EEEEEEETTTTEEEEEEC---CCSCEEEEEE-CTTS-------SEEEEEECCS------CTTSEEE
T ss_pred CCCeEEEEeCC---CcEEEEECCCCEEEEEec---CCCCcceEEE-eCCC-------CEEEEEeCCC------CcccceE
Confidence 46889998763 789999999988766533 1111222222 2111 4588876322 1222345
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS 250 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~ 250 (373)
..++. .+.+.....++ .......+++. +|.||+.. .....|..||+.+.....+ ...+....-.+++.
T Consensus 208 ~~~~~-~g~~~~~~~l~-------~~~~p~giavdp~~g~lyv~d-~~~~~V~~~~~~~~~~~~~-~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 208 YILTR-ESGFKVITELT-------KGQNCNGAETHPINGELYFNS-WNAGQVFRYDFTTQETTPL-FTIQDSGWEFHIQF 277 (430)
T ss_dssp EEEEG-GGTSCSEEEEE-------ECSSCCCEEECTTTCCEEEEE-TTTTEEEEEETTTTEEEEE-EECSSSSCCEEEEE
T ss_pred EEEeC-CCceeeeeeec-------cCCCceEEEEeCCCCEEEEEE-CCCCEEEEEECCCCcEEEE-EEcCCCCcceeEEE
Confidence 66665 33443211110 11122233332 58899884 4567899999987765333 22222111223443
Q ss_pred E-CCE-EEEEEeecCCceEEEEeecCCCCCCe---EEEEeechh-hhhhh-cCCCCCCCce-EEEe---------cCCEE
Q 046684 251 R-NQK-LTLIGGTCGGDACVWELSEGGDDDIW---CLIEKVPIE-MGMRL-SGGKASWGGT-RCAA---------GNGAI 313 (373)
Q Consensus 251 ~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W---~~v~~~p~~-~~~~~-~~~~~~~~~~-~~~~---------~~~~i 313 (373)
. +|+ ||+... ....+.+++++. .+... ..+...+.. .+..- ........+. .++. .++.|
T Consensus 278 ~pdG~~lyv~d~-~~~~I~~~~~d~--~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~l 354 (430)
T 3tc9_A 278 HPSGNYAYIVVV-NQHYILRSDYDW--KTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDF 354 (430)
T ss_dssp CTTSSEEEEEET-TTTEEEEEEEET--TTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEE
T ss_pred cCCCCEEEEEEC-CCCEEEEEeCCc--ccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeE
Confidence 3 555 888753 222355555543 22222 222221100 00000 0000011133 4444 24689
Q ss_pred EEEEcCCccEEEEEcc
Q 046684 314 CLYREVGLGMIIWRED 329 (373)
Q Consensus 314 ~~~~~~~~~~~~yd~~ 329 (373)
|+.+.....|..+|++
T Consensus 355 yvaD~~n~~I~~i~~~ 370 (430)
T 3tc9_A 355 YFCDRENHCIRILTPQ 370 (430)
T ss_dssp EEEEGGGTEEEEECTT
T ss_pred EEEECCCcEEEEECCC
Confidence 9998877889999964
No 213
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.57 E-value=0.56 Score=42.42 Aligned_cols=147 Identities=9% Similarity=0.019 Sum_probs=74.9
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~ 227 (373)
.++++.|+.+ ..+.+||..++.-....... .....-..+++. ++.+.+.+ .....|..+|+
T Consensus 132 ~~~lasGs~d----------g~i~lWd~~~~~~~~~~~~~------gH~~~V~~l~f~p~~~~~l~s~-s~D~~v~iwd~ 194 (435)
T 4e54_B 132 PSTVAVGSKG----------GDIMLWNFGIKDKPTFIKGI------GAGGSITGLKFNPLNTNQFYAS-SMEGTTRLQDF 194 (435)
T ss_dssp TTCEEEEETT----------SCEEEECSSCCSCCEEECCC------SSSCCCCEEEECSSCTTEEEEE-CSSSCEEEEET
T ss_pred CCEEEEEeCC----------CEEEEEECCCCCceeEEEcc------CCCCCEEEEEEeCCCCCEEEEE-eCCCEEEEeec
Confidence 4467777654 35888988776543332221 011111222332 45544443 45567889999
Q ss_pred CCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE
Q 046684 228 ESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC 306 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 306 (373)
+++....+............+.. -++.+++.++ .+..+.+|+++. .. +..+.. .. . ....+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~dg~i~~wd~~~----~~---~~~~~~------h~---~-~v~~v 256 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-NVGNVILLNMDG----KE---LWNLRM------HK---K-KVTHV 256 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-SSSBEEEEESSS----CB---CCCSBC------CS---S-CEEEE
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-CCCcEeeeccCc----ce---eEEEec------cc---c-eEEee
Confidence 98877665221111111222333 3566666654 344578998854 21 111110 00 0 01222
Q ss_pred Ee--cCCEEEEEEcCCccEEEEEccccCC
Q 046684 307 AA--GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 307 ~~--~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.. .++.+++.++..+.+.+||++ +.
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~--~~ 283 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLR--QV 283 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETT--TC
T ss_pred eecCCCceEEEEecCcceeeEEecc--cc
Confidence 22 345677777777788899987 54
No 214
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.47 E-value=3.6 Score=40.52 Aligned_cols=103 Identities=7% Similarity=-0.082 Sum_probs=59.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++.|||.- .....|.++|+....-+.+ ...... .-.++++ .+|.||+....... .|+..+. +...=+.+..
T Consensus 482 ~~~LY~tD-~~~~~I~v~~ldG~~~~~l-~~~~l~-~P~gIaVDp~~g~LYwtD~g~~~--~I~~~~~--dG~~~~~lv~ 554 (791)
T 3m0c_C 482 HSNIYWTD-SVLGTVSVADTKGVKRKTL-FRENGS-KPRAIVVDPVHGFMYWTDWGTPA--KIKKGGL--NGVDIYSLVT 554 (791)
T ss_dssp TTEEEEEE-TTTTEEEEEETTSSSEEEE-EECTTC-CEEEEEEETTTTEEEEEECSSSC--EEEEEET--TSCCEEEEEC
T ss_pred CCcEEEEe-cCCCeEEEEeCCCCeEEEE-EeCCCC-CcceEEEecCCCCEEEecCCCCC--eEEEEec--CCCceEEEEe
Confidence 57999994 4567899999987665555 221111 1124444 36899998632222 3555544 2222222211
Q ss_pred echhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
... ..+..++. .++.||+.+.....|..+|++
T Consensus 555 --~~l----------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 555 --ENI----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp --SSC----------SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --CCC----------CCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 110 11344444 478999998877789999988
No 215
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.43 E-value=4.3 Score=34.09 Aligned_cols=61 Identities=7% Similarity=-0.037 Sum_probs=33.7
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee-EEEE-CCEEEEEEeecCCceEEEEeec
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT-LVSR-NQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~-~~~~-~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+.+....|...+.|..||..+.+-... +..+..... ++.. +|++++.++ .+..+.+|++.+
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~---l~gH~~~V~~l~~spdg~~l~S~s-~D~~v~iWd~~~ 315 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAE---LKGHTSRVLSLTMSPDGATVASAA-ADETLRLWRCFE 315 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSC
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEE---EcCCCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCC
Confidence 444444455677899999987653322 222222222 2222 566555554 445589999865
No 216
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.41 E-value=4.7 Score=34.50 Aligned_cols=239 Identities=10% Similarity=-0.038 Sum_probs=109.0
Q ss_pred CceEEEEEecC-CCeeEEEEeCCCCCccccCCCCCCCCceeEEee-C---cEEEEeeCCCCceEEEEEcCcccc--eecc
Q 046684 50 PAWFLALPTRN-RGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSI-G---SFLLLRPINSTILQLVLCNPFTRQ--FRYL 122 (373)
Q Consensus 50 ~~~l~~~~~~~-~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~---g~l~~~gg~~~~~~~~v~np~t~~--w~~l 122 (373)
...+++.+... ....+..||..+.+............-.+++.. + |.+++.++. ...+.+||..+++ ...+
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~ 107 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF--GGNLHIWNLEAPEMPVYSV 107 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET--TSCEEEECTTSCSSCSEEE
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC--CCeEEEEeCCCCCccEEEE
Confidence 33455544331 236777788877655433111111111222222 2 344443432 4678999998775 1112
Q ss_pred CCCCCCCCCCeEEEEEc---CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc--eeeecCCCccccccce
Q 046684 123 PLLNVSRTNPAVGIVME---GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA--WQIIGSMPVEFAVRLT 197 (373)
Q Consensus 123 p~~~~~~~~~~~~~~~~---~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~~~~~ 197 (373)
... ... ..++... ..+.+ ++.++.|+.+ ..+.+||..++. ...+..... ..
T Consensus 108 ~~~---~~~-v~~~~~~~~~~~s~~-----~~~l~~~~~d----------~~i~vwd~~~~~~~~~~~~~~~~-----~~ 163 (357)
T 3i2n_A 108 KGH---KEI-INAIDGIGGLGIGEG-----APEIVTGSRD----------GTVKVWDPRQKDDPVANMEPVQG-----EN 163 (357)
T ss_dssp CCC---SSC-EEEEEEESGGGCC-C-----CCEEEEEETT----------SCEEEECTTSCSSCSEEECCCTT-----SC
T ss_pred Eec---ccc-eEEEeeccccccCCC-----ccEEEEEeCC----------CeEEEEeCCCCCCcceeccccCC-----CC
Confidence 211 111 1111111 11111 5556666554 358899988764 333322110 00
Q ss_pred eccCCceE-----EECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE----CCEEEEEEeecCCceEE
Q 046684 198 VWTPNESV-----CTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR----NQKLTLIGGTCGGDACV 268 (373)
Q Consensus 198 ~~~~~~~~-----~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~----~g~l~~~gg~~~~~~~i 268 (373)
......++ ..++.+.+.+ .....+..||+.+.+-... .... ..-..+... ++..+++++ .+..+.+
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~-~~~~--~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i 238 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNMALRWE-TNIK--NGVCSLEFDRKDISMNKLVATS-LEGKFHV 238 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTTEEEEE-EECS--SCEEEEEESCSSSSCCEEEEEE-STTEEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccCceeee-cCCC--CceEEEEcCCCCCCCCEEEEEC-CCCeEEE
Confidence 00111111 1356655554 4467899999988765333 1211 112223333 456666654 4445789
Q ss_pred EEeecCCCCCCeEEE-EeechhhhhhhcCCCCCCCceEE-EecCCE-EEEEEcCCccEEEEEccccCC
Q 046684 269 WELSEGGDDDIWCLI-EKVPIEMGMRLSGGKASWGGTRC-AAGNGA-ICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 269 ~~~~~~~~~~~W~~v-~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~yd~~~~~~ 333 (373)
|++.. ........ ..+.... . ....+ ...++. +++.++..+.+.+||.+ +.
T Consensus 239 ~d~~~--~~~~~~~~~~~~~~~~-----~-----~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~ 292 (357)
T 3i2n_A 239 FDMRT--QHPTKGFASVSEKAHK-----S-----TVWQVRHLPQNRELFLTAGGAGGLHLWKYE--YP 292 (357)
T ss_dssp EEEEE--EETTTEEEEEEEECCS-----S-----CEEEEEEETTEEEEEEEEETTSEEEEEEEE--CC
T ss_pred EeCcC--CCcccceeeeccCCCc-----C-----CEEEEEECCCCCcEEEEEeCCCcEEEeecC--CC
Confidence 99875 11111111 0110000 0 01222 223444 77778888889999998 54
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.40 E-value=8.3 Score=37.25 Aligned_cols=144 Identities=11% Similarity=0.025 Sum_probs=75.0
Q ss_pred ceEEEEECCCC--ceeeecCCCccccccceeccCCceEEECCEEEEEEcCC--ceEEEEEECCCC---cEEecccCCCCC
Q 046684 170 SMVEMYDSRHD--AWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR--AYSVIGFDIESN---TWRELSAPMADR 242 (373)
Q Consensus 170 ~~~~~yd~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~--~~~i~~yd~~~~---~w~~~~~~~p~~ 242 (373)
..++++|..+. .|+.+..-.. ... ......++.+|+..... ...|+..|+++. .|+.+ .+....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~-------~~~-~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD-------ADV-SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQ 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS-------SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSS
T ss_pred cEEEEEECCCCCCceEEEeCCCC-------ceE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCC
Confidence 58899998765 6777654311 000 11234568899886332 478999999863 48876 443332
Q ss_pred CCceeEEEECCEEEEEEeecCCc-eEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC--
Q 046684 243 LEFATLVSRNQKLTLIGGTCGGD-ACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-- 319 (373)
Q Consensus 243 ~~~~~~~~~~g~l~~~gg~~~~~-~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 319 (373)
.. .....++.|++....++.. +.+|+++ ..+...-.+|...... .......++.|++....
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~-----g~~~~~l~~p~~~~~~---------~~~~~~d~~~l~~~~ss~~ 393 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFDYE-----GKRVREVALPGLGSVS---------GFNGKHDDPALYFGFENYA 393 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEECTT-----SCEEEEECCSSSSEEE---------ECCCCTTCSCEEEEEECSS
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEECC-----CCeeEEeecCCCceEE---------eeecCCCCCEEEEEecCCC
Confidence 22 4444566676655443322 4455443 2233222233211000 01111134556554322
Q ss_pred -CccEEEEEccccCCcccEEEecc
Q 046684 320 -GLGMIIWREDEDKRKWEWVWVGG 342 (373)
Q Consensus 320 -~~~~~~yd~~~~~~~~~W~~~~~ 342 (373)
...++.||++ ++ +.+.+..
T Consensus 394 tP~~l~~~d~~--~g--~~~~l~~ 413 (693)
T 3iuj_A 394 QPPTLYRFEPK--SG--AISLYRA 413 (693)
T ss_dssp SCCEEEEECTT--TC--CEEEEEC
T ss_pred CCCEEEEEECC--CC--eEEEEEe
Confidence 2569999998 88 6666543
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=92.37 E-value=5.5 Score=35.16 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=40.4
Q ss_pred CCEEEEEEeecC------CceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC-EEEEEEcCCccEE
Q 046684 252 NQKLTLIGGTCG------GDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG-AICLYREVGLGMI 324 (373)
Q Consensus 252 ~g~l~~~gg~~~------~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~ 324 (373)
+++||+...... ..-.||.++. .+.+.+..++.+.... ...+...|. .+|+.+...+.+.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~~p~---------~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGHDVD---------AISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCCCcC---------eEEECCCCCeEEEEEcCCCCeEE
Confidence 467888754211 1135777765 7778888886554210 233333355 4665554677899
Q ss_pred EEEccccCC
Q 046684 325 IWREDEDKR 333 (373)
Q Consensus 325 ~yd~~~~~~ 333 (373)
+||.+ +.
T Consensus 345 ViD~~--t~ 351 (373)
T 2mad_H 345 IYDAG--AG 351 (373)
T ss_pred EEECC--CC
Confidence 99999 66
No 219
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.29 E-value=2.7 Score=37.61 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=75.6
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~ 227 (373)
+++++.|+.+ ..+.+||.++++-...-..+ ... .....+.+ ++.+.+.| .....|..||+
T Consensus 182 ~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~------~h~-~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~ 243 (437)
T 3gre_A 182 KSLLVALTNL----------SRVIIFDIRTLERLQIIENS------PRH-GAVSSICIDEECCVLILG-TTRGIIDIWDI 243 (437)
T ss_dssp CEEEEEEETT----------SEEEEEETTTCCEEEEEECC------GGG-CCEEEEEECTTSCEEEEE-ETTSCEEEEET
T ss_pred CCEEEEEeCC----------CeEEEEeCCCCeeeEEEccC------CCC-CceEEEEECCCCCEEEEE-cCCCeEEEEEc
Confidence 5566666554 47899999876532111110 000 11111222 45555554 44677999999
Q ss_pred CCCcEEecccCCCCCCCceeEEEE----CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechh---hh-hhhcC---
Q 046684 228 ESNTWRELSAPMADRLEFATLVSR----NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIE---MG-MRLSG--- 296 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~----~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~---~~-~~~~~--- 296 (373)
.+++.... ...+....-..+... .+.-+++.+..+..+.+|++.. .+ .+..+... .. ..+.+
T Consensus 244 ~~~~~~~~-~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~----~~--~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T 3gre_A 244 RFNVLIRS-WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK----GH--CQYAFINSDEQPSMEHFLPIEK 316 (437)
T ss_dssp TTTEEEEE-EBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT----TE--EEEEEESSSSCCCGGGGSCBCS
T ss_pred CCccEEEE-EecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC----Cc--EEEEEEcCCCCCccceeccccc
Confidence 88665432 122221111112111 2344445444555589999864 32 22221100 00 00000
Q ss_pred --------C-CCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 297 --------G-KASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 297 --------~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+ .+......+...++.+++.++.++.+.+||++ +.
T Consensus 317 ~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~--~~ 360 (437)
T 3gre_A 317 GLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN--EL 360 (437)
T ss_dssp SGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT--CG
T ss_pred ccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC--Cc
Confidence 0 00000122222377888888888899999998 76
No 220
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.26 E-value=1.7 Score=38.20 Aligned_cols=108 Identities=9% Similarity=-0.046 Sum_probs=54.0
Q ss_pred ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 106 ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 106 ~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
...++++|..+++-+.+...+.. ....... +. +++.+++.... ........++++|..++..+.+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~---~~~~~~s-p~-------dg~~l~~~~~~----~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQW---LGHPIYR-PY-------DDSTVAFCHEG----PHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC---EEEEEEE-TT-------EEEEEEEEECS----CTTTSSCSEEEEETTSCCCEES
T ss_pred cceEEEEECCCCceEEeecCCcc---ccccEEC-CC-------CCCEEEEEEec----CCCCCcceEEEEeCCCCceEEe
Confidence 36799999999876665432211 1111121 10 14433332222 0122245789999887776665
Q ss_pred cCCCccccccceeccCCceEE-ECCE-EEEEEcC-C--ceEEEEEECCCCcEEec
Q 046684 186 GSMPVEFAVRLTVWTPNESVC-TRGM-LYWITSA-R--AYSVIGFDIESNTWREL 235 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~-~~g~-ly~~gg~-~--~~~i~~yd~~~~~w~~~ 235 (373)
...... ... ...++ -+|+ |++.... . ...|+.+|+++++-+.+
T Consensus 232 ~~~~~~-----~~~--~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 232 KTHAEG-----ESC--THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp CCCCTT-----EEE--EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred eeCCCC-----ccc--ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 443210 000 01112 2454 5554321 1 23599999999887665
No 221
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.24 E-value=3.4 Score=36.91 Aligned_cols=104 Identities=17% Similarity=0.144 Sum_probs=56.3
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+.+.+. +.....|..||+.+.+-... ...+........+.. ++.+++.++. +..+.+|++.. . +.+..+
T Consensus 182 ~~~l~~-~~~d~~i~iwd~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~----~--~~~~~~ 252 (437)
T 3gre_A 182 KSLLVA-LTNLSRVIIFDIRTLERLQI-IENSPRHGAVSSICIDEECCVLILGTT-RGIIDIWDIRF----N--VLIRSW 252 (437)
T ss_dssp CEEEEE-EETTSEEEEEETTTCCEEEE-EECCGGGCCEEEEEECTTSCEEEEEET-TSCEEEEETTT----T--EEEEEE
T ss_pred CCEEEE-EeCCCeEEEEeCCCCeeeEE-EccCCCCCceEEEEECCCCCEEEEEcC-CCeEEEEEcCC----c--cEEEEE
Confidence 555555 34567899999988764333 222212222222222 5666666554 44579999854 3 333333
Q ss_pred chhhhhhhcCCCCCCCceEEE----e--cCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCA----A--GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~----~--~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
...... ...++ . .++.+++.++..+.+.+||.+ ++
T Consensus 253 ~~~~~~----------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~--~~ 293 (437)
T 3gre_A 253 SFGDHA----------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV--KG 293 (437)
T ss_dssp BCTTCE----------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETT--TT
T ss_pred ecCCCC----------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcC--CC
Confidence 211100 11111 1 245577777777789999998 77
No 222
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=92.23 E-value=2.1 Score=38.51 Aligned_cols=107 Identities=15% Similarity=0.104 Sum_probs=51.6
Q ss_pred EEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CC-EEEEEEeecCCceEEEEeecCCCCCC--------
Q 046684 211 LYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQ-KLTLIGGTCGGDACVWELSEGGDDDI-------- 279 (373)
Q Consensus 211 ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g-~l~~~gg~~~~~~~i~~~~~~~~~~~-------- 279 (373)
+++.| ...+.|..||..+..- .+ ..+.........+.. ++ .+++.++.+ ..+.+|++...+....
T Consensus 292 ~l~tg-~~dg~v~vwd~~~~~~-~~-~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 292 ILATG-SADKTVALWDLRNLKL-KL-HSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp EEEEE-ETTSEEEEEETTCTTS-CS-EEEECCSSCEEEEEECSSCTTEEEEEETT-SCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred EEEEE-eCCCeEEEEeCCCCCC-Ce-EEeecCCCCEEEEEECCCCCCEEEEEeCC-CcEEEEeCCCCccccCccccccCC
Confidence 66664 4567799999886321 11 111111122222222 34 466666543 4579999976211100
Q ss_pred eEEEEeechhhhhhhcCCCCCCCceEEEe-cCCE-EEEEEcCCccEEEEEccccCC
Q 046684 280 WCLIEKVPIEMGMRLSGGKASWGGTRCAA-GNGA-ICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 280 W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-i~~~~~~~~~~~~yd~~~~~~ 333 (373)
-..+..... ... ....+.. .++. +++.++..+.+.+|++. ++
T Consensus 368 ~~~~~~~~~---------h~~-~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~--~~ 411 (430)
T 2xyi_A 368 PELLFIHGG---------HTA-KISDFSWNPNEPWIICSVSEDNIMQVWQMA--EN 411 (430)
T ss_dssp TTEEEECCC---------CSS-CEEEEEECSSSTTEEEEEETTSEEEEEEEC--HH
T ss_pred cceEEEcCC---------CCC-CceEEEECCCCCCEEEEEECCCCEEEeEcc--cc
Confidence 011111110 000 0122222 2344 77777788889999998 66
No 223
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.20 E-value=4.9 Score=34.22 Aligned_cols=136 Identities=7% Similarity=-0.082 Sum_probs=63.0
Q ss_pred ceEEEEEC-CCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCC---c----EEecccCCCC
Q 046684 170 SMVEMYDS-RHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESN---T----WRELSAPMAD 241 (373)
Q Consensus 170 ~~~~~yd~-~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~---~----w~~~~~~~p~ 241 (373)
..+.+||. .++.-..+...+ ....-...++..+.+.+.+ .....|..||+.+. . ...+ .....
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~-------~~~~v~~l~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~ 149 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNE-------ANLGICRICKYGDDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLNS-NNTKV 149 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCC-------CCSCEEEEEEETTTEEEEE-ETTSEEEEECHHHHTTBCEEEEESCS-SSSSS
T ss_pred CeEEEEEeccCCceEeccccC-------CCCceEEEEeCCCCEEEEE-cCCCeEEEEcccccccccccccCCee-eEEee
Confidence 36899998 877655444310 0001112223324444443 34577888888750 0 2222 12222
Q ss_pred CCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCC-eEEEEeechhhhhhhcCCCCCCCceEEEec-CCEEEEEEcC
Q 046684 242 RLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDI-WCLIEKVPIEMGMRLSGGKASWGGTRCAAG-NGAICLYREV 319 (373)
Q Consensus 242 ~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 319 (373)
...-..+....+. +++ +..+..+.+|++.. .... ..... .+..... ....... ++..++.++.
T Consensus 150 ~~~v~~~~~~~~~-l~~-~~~d~~i~i~d~~~--~~~~~~~~~~-~~~~~~i----------~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 150 KNKIFTMDTNSSR-LIV-GMNNSQVQWFRLPL--CEDDNGTIEE-SGLKYQI----------RDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CCCEEEEEECSSE-EEE-EESTTEEEEEESSC--CTTCCCEEEE-CSCSSCE----------EEEEECSGGGCEEEEEET
T ss_pred CCceEEEEecCCc-EEE-EeCCCeEEEEECCc--cccccceeee-cCCCCce----------eEEEECCCCCCEEEEEec
Confidence 2222233333444 333 34445588999863 0111 22221 1111000 1222223 4566777777
Q ss_pred CccEEEEEcc
Q 046684 320 GLGMIIWRED 329 (373)
Q Consensus 320 ~~~~~~yd~~ 329 (373)
.+.+.+||.+
T Consensus 215 dg~i~i~~~~ 224 (342)
T 1yfq_A 215 DGRVAVEFFD 224 (342)
T ss_dssp TSEEEEEECC
T ss_pred CCcEEEEEEc
Confidence 7788888887
No 224
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.17 E-value=5.6 Score=34.74 Aligned_cols=72 Identities=11% Similarity=-0.097 Sum_probs=39.0
Q ss_pred CceEEEEEecCCCeeEEEEeCCCCCccccCCCCCCCCceeEEeeC-cEEEEeeCCCCceEEEEEcCcccceeccCC
Q 046684 50 PAWFLALPTRNRGLCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIG-SFLLLRPINSTILQLVLCNPFTRQFRYLPL 124 (373)
Q Consensus 50 ~~~l~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~-g~l~~~gg~~~~~~~~v~np~t~~w~~lp~ 124 (373)
...++..........++.+|..+.....+............-+.+ ..|++... ...++++|+.+++-+.+..
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~---~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN---ELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET---TTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc---CCcEEEEECCCCCcEEEEe
Confidence 344554444333356788898877666553322211111122334 44545444 2479999998887655543
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.08 E-value=5.4 Score=34.39 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=15.3
Q ss_pred cCCEEEEEEcCCccEEEEEcc
Q 046684 309 GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.++..++.++..+.+.+||+.
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESS
T ss_pred CCCCEEEEEcCCCeEEEEECC
Confidence 356667777777788888884
No 226
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.05 E-value=1.2 Score=42.04 Aligned_cols=122 Identities=7% Similarity=0.052 Sum_probs=68.9
Q ss_pred ceEEECCEEEEEEcCCceEEEEEEC-CCC--cEEecccCCCCC--------CCceeEEEECCEEEEEEeecCCceEEEEe
Q 046684 203 ESVCTRGMLYWITSARAYSVIGFDI-ESN--TWRELSAPMADR--------LEFATLVSRNQKLTLIGGTCGGDACVWEL 271 (373)
Q Consensus 203 ~~~~~~g~ly~~gg~~~~~i~~yd~-~~~--~w~~~~~~~p~~--------~~~~~~~~~~g~l~~~gg~~~~~~~i~~~ 271 (373)
..++.+|.+|+... ....++++|. +++ .|+.- ...+.. ....+.+..+++||+... +..+..++.
T Consensus 57 ~P~v~~g~vyv~~~-~~~~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg~l~alD~ 132 (571)
T 2ad6_A 57 APLVIGDMMYVHSA-FPNNTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--NGHLLALDA 132 (571)
T ss_dssp CCEEETTEEEEECS-TTTCEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TSEEEEEET
T ss_pred ccEEECCEEEEEeC-CCCEEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeC--CCEEEEEEC
Confidence 34778999999842 1467999999 765 58764 222111 112345667888887642 222334444
Q ss_pred ecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-----CccEEEEEccccCCcccEEEec
Q 046684 272 SEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-----GLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 272 ~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
++ .+..|+.-..-+... .. . ...-+..++.||+.... .+.+..||.+ +++..|+.-.
T Consensus 133 ~t--G~~~W~~~~~~~~~~-~~------~--~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~--tG~~~W~~~~ 194 (571)
T 2ad6_A 133 KT--GKINWEVEVCDPKVG-ST------L--TQAPFVAKDTVLMGCSGAELGVRGAVNAFDLK--TGELKWRAFA 194 (571)
T ss_dssp TT--CCEEEEEECCCGGGT-CB------C--CSCCEEETTEEEEECBCGGGTCCCEEEEEETT--TCCEEEEEES
T ss_pred CC--CCEEEEecCCCCCcc-ce------e--ccCCEEECCEEEEEecCCccCCCCEEEEEECC--CCcEEEEEcc
Confidence 33 344587532211100 00 0 11112347888876542 4679999999 9877888643
No 227
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.00 E-value=1.5 Score=38.89 Aligned_cols=149 Identities=11% Similarity=0.119 Sum_probs=72.1
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~ 228 (373)
++.++.|+.+ ..+.+||..+++-...-.- +. ..-..+++. +|...+. +.....+..+|+.
T Consensus 135 g~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~-------h~-~~v~~~~~~p~~~~l~s-~s~d~~v~iwd~~ 195 (393)
T 1erj_A 135 GKFLATGAED----------RLIRIWDIENRKIVMILQG-------HE-QDIYSLDYFPSGDKLVS-GSGDRTVRIWDLR 195 (393)
T ss_dssp SSEEEEEETT----------SCEEEEETTTTEEEEEECC-------CS-SCEEEEEECTTSSEEEE-EETTSEEEEEETT
T ss_pred CCEEEEEcCC----------CeEEEEECCCCcEEEEEcc-------CC-CCEEEEEEcCCCCEEEE-ecCCCcEEEEECC
Confidence 5566666554 4688999887653222111 00 000111222 3444444 3456788999998
Q ss_pred CCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE
Q 046684 229 SNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC 306 (373)
Q Consensus 229 ~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 306 (373)
+++.... .... .....++.. ++++++.++. +..+.+|++.. .. .+..+...... ..+.........
T Consensus 196 ~~~~~~~-~~~~--~~v~~~~~~~~~~~~l~~~s~-d~~v~iwd~~~----~~--~~~~~~~~~~~--~~~h~~~v~~v~ 263 (393)
T 1erj_A 196 TGQCSLT-LSIE--DGVTTVAVSPGDGKYIAAGSL-DRAVRVWDSET----GF--LVERLDSENES--GTGHKDSVYSVV 263 (393)
T ss_dssp TTEEEEE-EECS--SCEEEEEECSTTCCEEEEEET-TSCEEEEETTT----CC--EEEEEC--------CCCSSCEEEEE
T ss_pred CCeeEEE-EEcC--CCcEEEEEECCCCCEEEEEcC-CCcEEEEECCC----Cc--EEEeecccccC--CCCCCCCEEEEE
Confidence 8765433 2211 111222222 5666666654 44579999864 32 22222211100 000000001222
Q ss_pred EecCCEEEEEEcCCccEEEEEcc
Q 046684 307 AAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 307 ~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
+..++..++.++..+.+.+||++
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred ECCCCCEEEEEeCCCEEEEEECC
Confidence 23356667777777889999987
No 228
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.89 E-value=5.5 Score=34.06 Aligned_cols=148 Identities=9% Similarity=0.038 Sum_probs=76.5
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccC-CceEEE--CCEEEEEEcC---------
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTP-NESVCT--RGMLYWITSA--------- 217 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~~~~--~g~ly~~gg~--------- 217 (373)
++||+.... ..+.+||+.++..+.+..... ...... ..+++- +|.+|+....
T Consensus 92 g~l~v~d~~-----------~~i~~~d~~~g~~~~~~~~~~-----~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 92 NQLYIVDCY-----------YHLSVVGSEGGHATQLATSVD-----GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp TEEEEEETT-----------TEEEEECTTCEECEEEESEET-----TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred CcEEEEECC-----------CCEEEEeCCCCEEEEecccCC-----CCcccccceEEEecCCCEEEEECCcccccccccc
Confidence 778886422 237788887766555432211 011111 122332 5789887422
Q ss_pred -------CceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEeech
Q 046684 218 -------RAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPI 288 (373)
Q Consensus 218 -------~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~ 288 (373)
....++.||+.+++...+...+. ...+++.. +| .||+.... ...+.+|+++. ......+.+..++.
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---~p~gia~~~dg~~lyv~d~~-~~~I~~~~~~~-~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLKELH---VPGGAEVSADSSFVLVAEFL-SHQIVKYWLEG-PKKGTAEVLVKIPN 230 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEEEES---CCCEEEECTTSSEEEEEEGG-GTEEEEEESSS-TTTTCEEEEEECSS
T ss_pred eehcccCCCceEEEEeCCCCEEEEeccCCc---cCcceEECCCCCEEEEEeCC-CCeEEEEECCC-CcCCccceEEeCCC
Confidence 13679999998887665411111 11234433 44 47776542 23355555542 01134444443321
Q ss_pred hhhhhhcCCCCCCCceEEEecCCEEEEEEcC----------CccEEEEEccccCC
Q 046684 289 EMGMRLSGGKASWGGTRCAAGNGAICLYREV----------GLGMIIWREDEDKR 333 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~yd~~~~~~ 333 (373)
. .-.++..++.||+.... ...+..||++ .+
T Consensus 231 ---P----------~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~ 270 (322)
T 2fp8_A 231 ---P----------GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GN 270 (322)
T ss_dssp ---E----------EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SC
T ss_pred ---C----------CCeEECCCCCEEEEecCcccccccCCCccEEEEECCC--CC
Confidence 1 12334446679987644 4569999998 55
No 229
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.81 E-value=6.2 Score=34.52 Aligned_cols=182 Identities=8% Similarity=-0.052 Sum_probs=83.3
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeE-EeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCC-eEEEEEcC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPV-SSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNP-AVGIVMEG 140 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~-~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~-~~~~~~~~ 140 (373)
..+..+|+.+.+...... ....-..+ -+.+|.+++.++ ...+.+++..+++.............. ++++..+
T Consensus 157 ~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd- 230 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYIT---GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIAD- 230 (365)
T ss_dssp CEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEEC---SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEET-
T ss_pred CEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEecc---ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCC-
Confidence 456667876654322211 11111122 244666555555 356777887777654322211111111 2222221
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCc
Q 046684 141 PAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARA 219 (373)
Q Consensus 141 ~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~ 219 (373)
++.++.++.+ ......+..++............... .....-.++++ -+|.+.+.| ...
T Consensus 231 ---------g~~l~~~s~d------~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~V~~~~~Spdg~~lasg-s~D 290 (365)
T 4h5i_A 231 ---------DTVLIAASLK------KGKGIVLTKISIKSGNTSVLRSKQVT----NRFKGITSMDVDMKGELAVLA-SND 290 (365)
T ss_dssp ---------TEEEEEEEES------SSCCEEEEEEEEETTEEEEEEEEEEE----SSCSCEEEEEECTTSCEEEEE-ETT
T ss_pred ---------CCEEEEEecC------CcceeEEeecccccceecceeeeeec----CCCCCeEeEEECCCCCceEEE-cCC
Confidence 5566655433 12223466677666554432211000 00000011111 257766664 446
Q ss_pred eEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeec
Q 046684 220 YSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
..|..||.++.+-... .+..+......+. -+|++++.+ ..+..+.||++..
T Consensus 291 ~~V~iwd~~~~~~~~~--~~~gH~~~V~~v~fSpdg~~laS~-S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKI--FKQAHSFAITEVTISPDSTYVASV-SAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEETTTTEEEEE--ETTSSSSCEEEEEECTTSCEEEEE-ETTSEEEEEECCT
T ss_pred CEEEEEECCCCcEEEE--ecCcccCCEEEEEECCCCCEEEEE-eCCCeEEEEEcCC
Confidence 7799999988654321 1122222222222 266655554 4555689999854
No 230
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.63 E-value=4.7 Score=34.19 Aligned_cols=136 Identities=8% Similarity=0.037 Sum_probs=66.2
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEE-ECC-EEEEEEcCCceEEEEEECCCCcEEecccCCCCC----C
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRG-MLYWITSARAYSVIGFDIESNTWRELSAPMADR----L 243 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g-~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~----~ 243 (373)
..+.++|..+++-...-..+. .......+++ -+| .+|+.. .....|..+|+.+.+-... .+.+.. .
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~v~~-~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~ 82 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD------AGPTPMVPMVAPGGRIAYATV-NKSESLVKIDLVTGETLGR-IDLSTPEERVK 82 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT------CTTCCCCEEECTTSSEEEEEE-TTTTEEEEEETTTCCEEEE-EECCBTTEEEE
T ss_pred CeEEEEECCCCcEEEEEEcCC------CCCCccceEEcCCCCEEEEEe-CCCCeEEEEECCCCCeEee-EEcCCcccccc
Confidence 468889988776433222211 0000112222 245 566663 4467899999988765432 222210 0
Q ss_pred CceeEEEE-CC-EEEEEEee----------cCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC
Q 046684 244 EFATLVSR-NQ-KLTLIGGT----------CGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG 311 (373)
Q Consensus 244 ~~~~~~~~-~g-~l~~~gg~----------~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
.-..++.. +| .||+.... ....+.+|+++. .+ .+..++..... ....+...+.
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~----~~--~~~~~~~~~~~---------~~~~~s~dg~ 147 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET----LS--RRKAFEAPRQI---------TMLAWARDGS 147 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT----TE--EEEEEECCSSC---------CCEEECTTSS
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCC----Cc--EEEEEeCCCCc---------ceeEECCCCC
Confidence 11123332 45 56665421 123466777643 33 33333221110 1233333455
Q ss_pred EEEEEEcCCccEEEEEccccCC
Q 046684 312 AICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 312 ~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.||+. .+.+.+||++ ++
T Consensus 148 ~l~~~---~~~i~~~d~~--~~ 164 (337)
T 1pby_B 148 KLYGL---GRDLHVMDPE--AG 164 (337)
T ss_dssp CEEEE---SSSEEEEETT--TT
T ss_pred EEEEe---CCeEEEEECC--CC
Confidence 57776 3469999999 77
No 231
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.32 E-value=11 Score=36.58 Aligned_cols=145 Identities=7% Similarity=-0.035 Sum_probs=77.6
Q ss_pred cceEEEEECCCC--c-eeeecCCCccccccceeccCCceEEECCEEEEEEcC--CceEEEEEECCC--CcEEecccCCCC
Q 046684 169 ESMVEMYDSRHD--A-WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA--RAYSVIGFDIES--NTWRELSAPMAD 241 (373)
Q Consensus 169 ~~~~~~yd~~~~--~-W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~--~~~~i~~yd~~~--~~w~~~~~~~p~ 241 (373)
...++++|..++ . |+.+..... ... ......++.+|+.... ....|+.+|+++ ++|+.+ .+...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~-------~~~-~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l-~~~~~ 363 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLK-------AQW-DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV-VPESK 363 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSS-------SCE-EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE-ECCCS
T ss_pred cceEEEEECCCCCCcccEEecCCCC-------ceE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE-ecCCC
Confidence 568899998877 6 887754311 011 1112345678877522 256799999988 579887 44322
Q ss_pred CCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEE--ecCCEEEEEEc-
Q 046684 242 RLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCA--AGNGAICLYRE- 318 (373)
Q Consensus 242 ~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~- 318 (373)
.. -..+...++.|++....++. ..+|.++. +.+ .+..++.+.... ...+. ..++.|++...
T Consensus 364 ~~-l~~~~~~~~~lv~~~~~dg~-~~l~~~~~--~g~---~~~~l~~~~~~~---------v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 364 DN-LESVGIAGNRLFASYIHDAK-SQVLAFDL--DGK---PAGAVSLPGIGS---------ASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp SE-EEEEEEEBTEEEEEEEETTE-EEEEEEET--TSC---EEEECBCSSSCE---------EEEEECCBTCSCEEEEEEE
T ss_pred Ce-EEEEEEECCEEEEEEEECCE-EEEEEEeC--CCC---ceeeccCCCCeE---------EEEeecCCCCCEEEEEEcC
Confidence 21 12334447888777655443 46777763 222 223333210000 01111 23445655432
Q ss_pred --CCccEEEEEccccCCcccEEEecc
Q 046684 319 --VGLGMIIWREDEDKRKWEWVWVGG 342 (373)
Q Consensus 319 --~~~~~~~yd~~~~~~~~~W~~~~~ 342 (373)
....++.||++ ++ +.+.+..
T Consensus 428 ~~~P~~i~~~d~~--tg--~~~~l~~ 449 (741)
T 1yr2_A 428 FTQPATVLALDPA--TA--KTTPWEP 449 (741)
T ss_dssp TTEEEEEEEEETT--TT--EEEECSC
T ss_pred CCCCCEEEEEECC--CC--cEEEEec
Confidence 12468999998 88 6665543
No 232
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.16 E-value=1.5 Score=42.37 Aligned_cols=120 Identities=15% Similarity=0.127 Sum_probs=68.8
Q ss_pred ceEEECCEEEEEEcCCceEEEEEECCCC--cEEecccCCCCC--------CCceeEEEECCEEEEEEeecCCceEEEEee
Q 046684 203 ESVCTRGMLYWITSARAYSVIGFDIESN--TWRELSAPMADR--------LEFATLVSRNQKLTLIGGTCGGDACVWELS 272 (373)
Q Consensus 203 ~~~~~~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~--------~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~ 272 (373)
+.++.+|.+|+.. ....+.++|.+++ .|+.- ...+.. ....+.+..+++||+... +..+..++.+
T Consensus 61 ~P~v~~g~vyv~~--~~~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg~l~alD~~ 135 (668)
T 1kv9_A 61 TPLFHDGVIYTSM--SWSRVIAVDAASGKELWRYD-PEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--DGRLIALDAK 135 (668)
T ss_dssp CCEEETTEEEEEE--GGGEEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--TSEEEEEETT
T ss_pred CCEEECCEEEEEC--CCCeEEEEECCCChhceEEC-CCCCccccccccccCCccceEEECCEEEEEcC--CCEEEEEECC
Confidence 3477899999985 3568999999876 48764 222211 012334566888877532 2234444444
Q ss_pred cCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-----CccEEEEEccccCCcccEEEe
Q 046684 273 EGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-----GLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 273 ~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~yd~~~~~~~~~W~~~ 340 (373)
+ .+..|+.-..-+..... . ...-+..++.||+.... .+.+..||.+ +++..|+.-
T Consensus 136 t--G~~~W~~~~~~~~~~~~-------~--~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~--tG~~~W~~~ 195 (668)
T 1kv9_A 136 T--GKAIWSQQTTDPAKPYS-------I--TGAPRVVKGKVIIGNGGAEYGVRGFVSAYDAD--TGKLAWRFY 195 (668)
T ss_dssp T--CCEEEEEECSCTTSSCB-------C--CSCCEEETTEEEECCBCTTTCCBCEEEEEETT--TCCEEEEEE
T ss_pred C--CCEeeeeccCCCCCcce-------e--cCCCEEECCEEEEeCCCCCcCCCCEEEEEECC--CCcEEEEec
Confidence 4 44568764321110000 0 11223357888875432 3579999999 997788864
No 233
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=90.83 E-value=12 Score=36.03 Aligned_cols=213 Identities=10% Similarity=-0.018 Sum_probs=100.0
Q ss_pred eeCcEEEEeeCCCC--ceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCccc
Q 046684 92 SIGSFLLLRPINST--ILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYE 169 (373)
Q Consensus 92 ~~~g~l~~~gg~~~--~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~ 169 (373)
.-|+.+|....... ...+++.+...++++.+-.....-..+...+.....+ +|++.+++.... .....
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~S-----PDG~~la~~~~~-----~G~~~ 146 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVS-----WDGKKVAFAQKP-----NAADE 146 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEEC-----TTSSEEEEEEEE-----TTCSC
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEEC-----CCCCEEEEEECC-----CCCce
Confidence 44666666543221 3467777777777766533221101111111111111 125544443222 22224
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcC------------CceEEEEEECCCCcE--Ee
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSA------------RAYSVIGFDIESNTW--RE 234 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~------------~~~~i~~yd~~~~~w--~~ 234 (373)
..++++|..+++......++ .......+.. +|+..+.+.. ....|+.+++.+++- ..
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~--------~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l 218 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIE--------GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV 218 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBS--------CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE
T ss_pred EEEEEEECCCCCCcCCcccC--------cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE
Confidence 68999999998864111111 1111223333 5554433322 234588899887653 22
Q ss_pred cccCCCCC-CCceeE-EEECCEEEEEEeecC-CceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCC
Q 046684 235 LSAPMADR-LEFATL-VSRNQKLTLIGGTCG-GDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNG 311 (373)
Q Consensus 235 ~~~~~p~~-~~~~~~-~~~~g~l~~~gg~~~-~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
+ ...+.. ...... ..-+|+..++..... ...++|.++. .+..|..+..-.... ...+...|+
T Consensus 219 v-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~--~~~~~~~l~~~~~~~------------~~~~~~~g~ 283 (695)
T 2bkl_A 219 V-HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP--GEKDFRLLVKGVGAK------------YEVHAWKDR 283 (695)
T ss_dssp E-ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT--TCSSCEEEEECSSCC------------EEEEEETTE
T ss_pred E-EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC--CCCceEEeecCCCce------------EEEEecCCc
Confidence 2 122221 111222 223565444444333 3457777765 456787775422211 122233445
Q ss_pred EEEEEEc---CCccEEEEEccccCCcc-cEEEe
Q 046684 312 AICLYRE---VGLGMIIWREDEDKRKW-EWVWV 340 (373)
Q Consensus 312 ~i~~~~~---~~~~~~~yd~~~~~~~~-~W~~~ 340 (373)
+|+... ....++.+|++ +.+. .|+.+
T Consensus 284 -l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~l 313 (695)
T 2bkl_A 284 -FYVLTDEGAPRQRVFEVDPA--KPARASWKEI 313 (695)
T ss_dssp -EEEEECTTCTTCEEEEEBTT--BCSGGGCEEE
T ss_pred -EEEEECCCCCCCEEEEEeCC--CCCccCCeEE
Confidence 666654 24579999987 6510 27655
No 234
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.78 E-value=13 Score=36.27 Aligned_cols=142 Identities=16% Similarity=0.116 Sum_probs=75.3
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCC-CCCeEEEEEcCC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSR-TNPAVGIVMEGP 141 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~-~~~~~~~~~~~~ 141 (373)
..+..||+.++++... ....+.....+...+|.|++... .-++.||+.+++.+.+....... ......+..+.
T Consensus 82 ~Gl~~yd~~~~~f~~~-~~~~~~~i~~i~~~~g~lWigt~----~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~- 155 (758)
T 3ott_A 82 NGILVYNYRADRYEQP-ETDFPTDVRTMALQGDTLWLGAL----NGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK- 155 (758)
T ss_dssp TEEEEEETTTTEECCC-SCCCCSCEEEEEEETTEEEEEET----TEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-
T ss_pred CCeEEEeCCCCEEECc-ccCCCceEEEEEecCCcEEEEcC----CcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-
Confidence 3567799988776542 11111111223345788888654 36899999998877653211111 11122233321
Q ss_pred CCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEEC--CEEEEEEcCCc
Q 046684 142 AQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTR--GMLYWITSARA 219 (373)
Q Consensus 142 ~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~--g~ly~~gg~~~ 219 (373)
+ +.|++.. . ..+..|+..+++.+.... |... ............+ +...|+|. .
T Consensus 156 --~-----g~lWigt-~-----------~Gl~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~i~~d~~~~~lWigt--~ 210 (758)
T 3ott_A 156 --D-----NQIYVGT-Y-----------NGLCRYIPSNGKFEGIPL-PVHS---SQSNLFVNSLLEDTTRQCVWIGT--E 210 (758)
T ss_dssp --T-----CCEEEEE-T-----------TEEEEEETTTTEEEEECC-CCCT---TCSSCCEEEEEEETTTTEEEEEE--E
T ss_pred --C-----CCEEEEe-C-----------CCHhhCccCCCceEEecC-CCcc---ccccceeEEEEEECCCCEEEEEE--C
Confidence 1 6677732 1 247889998888765532 1100 0000011122232 44445543 3
Q ss_pred eEEEEEECCCCcEEec
Q 046684 220 YSVIGFDIESNTWREL 235 (373)
Q Consensus 220 ~~i~~yd~~~~~w~~~ 235 (373)
..+..||+.++++...
T Consensus 211 ~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQT 226 (758)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred CCCeEEcCCCCeEEec
Confidence 5799999999988765
No 235
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.68 E-value=12 Score=35.73 Aligned_cols=123 Identities=11% Similarity=-0.027 Sum_probs=63.4
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeec
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIG 186 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 186 (373)
..+...+..+..-..+-+++.-.. ..++..+.. + ++||..... ...+..++......+.+.
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~--~~~l~~d~~--~-----~~lywtD~~----------~~~I~r~~~~g~~~~~v~ 75 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKE--ASALDFDVT--D-----NRIYWTDIS----------LKTISRAFMNGSALEHVV 75 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSC--EEEEEEETT--T-----TEEEEEETT----------TTEEEEEETTSCSCEEEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCc--eEEEEEECC--C-----CEEEEEECC----------CCeEEEEECCCCCcEEEE
Confidence 567777777654433322222111 222222211 1 788887532 246788887765555443
Q ss_pred CCCccccccceeccCCceEE--ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEE
Q 046684 187 SMPVEFAVRLTVWTPNESVC--TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIG 259 (373)
Q Consensus 187 ~~p~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~g 259 (373)
.... ......++ .++.|||.. .....|.++|+....-+.+ ..... ..-.++++- +|.||+..
T Consensus 76 ~~g~--------~~P~GlAvD~~~~~LY~tD-~~~~~I~v~~~dG~~~~~l-~~~~l-~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 76 EFGL--------DYPEGMAVDWLGKNLYWAD-TGTNRIEVSKLDGQHRQVL-VWKDL-DSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp CSSC--------SCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSTTCEEE-ECSSC-CCEEEEEEETTTTEEEEEE
T ss_pred eCCC--------CCcceEEEEeCCCEEEEEE-CCCCEEEEEecCCCcEEEE-EeCCC-CCcccEEEccCCCeEEEeC
Confidence 2210 11122333 368999984 4567899999976543333 21111 111244443 68888876
No 236
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.67 E-value=9.1 Score=34.57 Aligned_cols=202 Identities=8% Similarity=-0.035 Sum_probs=97.1
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
+|.||+.... ..+.++|+.+++...+.. ....+....+. .. ++||+..... ......+.
T Consensus 152 ~g~Lyv~D~~---~~I~~id~~~g~v~~~~~---~~~~P~giavd-~d--------G~lyVad~~~------~~~~~gv~ 210 (433)
T 4hw6_A 152 YDDLYWVGQR---DAFRHVDFVNQYVDIKTT---NIGQCADVNFT-LN--------GDMVVVDDQS------SDTNTGIY 210 (433)
T ss_dssp TCEEEEECBT---SCEEEEETTTTEEEEECC---CCSCEEEEEEC-TT--------CCEEEEECCS------CTTSEEEE
T ss_pred CCEEEEEeCC---CCEEEEECCCCEEEEeec---CCCCccEEEEC-CC--------CCEEEEcCCC------CcccceEE
Confidence 4889998753 789999999888776543 11112222222 11 4588875321 11123355
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcE-EecccCCCCCCCceeEEE
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTW-RELSAPMADRLEFATLVS 250 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w-~~~~~~~p~~~~~~~~~~ 250 (373)
.++.. +.+.....++ .......+++. +|.||+. ......|..||+.+.+. ..+ ...........++.
T Consensus 211 ~~~~~-~~~~~~~~~~-------~~~~P~giavd~~~G~lyv~-d~~~~~V~~~d~~~g~~~~~~-~~~~~~~~~~~ia~ 280 (433)
T 4hw6_A 211 LFTRA-SGFTERLSLC-------NARGAKTCAVHPQNGKIYYT-RYHHAMISSYDPATGTLTEEE-VMMDTKGSNFHIVW 280 (433)
T ss_dssp EECGG-GTTCCEEEEE-------ECSSBCCCEECTTTCCEEEC-BTTCSEEEEECTTTCCEEEEE-EECSCCSSCEEEEE
T ss_pred EEECC-CCeecccccc-------ccCCCCEEEEeCCCCeEEEE-ECCCCEEEEEECCCCeEEEEE-eccCCCCCcccEEE
Confidence 55543 2232111110 11112223333 6889987 34467899999987765 333 11111111223443
Q ss_pred E-CC-EEEEEEeecCCceEEEEeecCCCCCCeE---EEEeech-hhhhhh-cCCCCCCCceEEEe----------cCCEE
Q 046684 251 R-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWC---LIEKVPI-EMGMRL-SGGKASWGGTRCAA----------GNGAI 313 (373)
Q Consensus 251 ~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~---~v~~~p~-~~~~~~-~~~~~~~~~~~~~~----------~~~~i 313 (373)
. +| .||+..... ..+..++++. .+.... .+..... ..+..- ........+..++. .++.|
T Consensus 281 dpdG~~LYvad~~~-~~I~~~~~d~--~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 281 HPTGDWAYIIYNGK-HCIYRVDYNR--ETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp CTTSSEEEEEETTT-TEEEEEEBCT--TTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred eCCCCEEEEEeCCC-CEEEEEeCCC--CCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 3 44 488875322 2234444442 233321 2211100 000000 00000112344444 46799
Q ss_pred EEEEcCCccEEEEEcc
Q 046684 314 CLYREVGLGMIIWRED 329 (373)
Q Consensus 314 ~~~~~~~~~~~~yd~~ 329 (373)
|+.+.....|..+|++
T Consensus 358 yvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTPE 373 (433)
T ss_dssp EEEETTTTEEEEECTT
T ss_pred EEEECCCCEEEEECCC
Confidence 9999888889999975
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.38 E-value=2 Score=41.59 Aligned_cols=120 Identities=11% Similarity=0.106 Sum_probs=68.6
Q ss_pred eEEECCEEEEEEcCCceEEEEEECCCC--cEEecccCCCCC--------CCceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 204 SVCTRGMLYWITSARAYSVIGFDIESN--TWRELSAPMADR--------LEFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 204 ~~~~~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~--------~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
.++.+|.+|+.. ....+.++|.+++ .|+.- ...+.. ....+.+..+++||+... +..+..++.++
T Consensus 66 P~v~~g~vyv~~--~~~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--dg~l~AlDa~T 140 (689)
T 1yiq_A 66 PIVVDGVMYTTG--PFSVVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--DGRLEAIDAKT 140 (689)
T ss_dssp CEEETTEEEEEC--GGGCEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TSEEEEEETTT
T ss_pred CEEECCEEEEEc--CCCeEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEEECCEEEEEcc--CCEEEEEECCC
Confidence 467899999984 3467999999876 48754 222211 112234567888877542 22344555444
Q ss_pred CCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEc-----CCccEEEEEccccCCcccEEEe
Q 046684 274 GGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYRE-----VGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 274 ~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
.+..|+.-.......... .....+..++.+|+... ..+.+..||.+ +++..|+.-
T Consensus 141 --G~~~W~~~~~~~~~~~~~--------~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~--tG~~~W~~~ 200 (689)
T 1yiq_A 141 --GQRAWSVDTRADHKRSYT--------ITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE--TGKEAWRFY 200 (689)
T ss_dssp --CCEEEEEECCSCTTSCCB--------CCSCCEEETTEEEECCBCTTTCCBCEEEEEETT--TCCEEEEEE
T ss_pred --CCEeeeecCcCCCCCCcc--------ccCCcEEECCEEEEEeCCCccCCCCEEEEEECC--CCcEEEEec
Confidence 444587643211110000 01122335788887542 24579999999 997778864
No 238
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.35 E-value=13 Score=35.79 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=48.6
Q ss_pred ceEEEEECCC-CceeeecCCCccccccceeccCCceEEECCE-EEEEEc---CCceEEEEEECCCCcEEecccCCCCC--
Q 046684 170 SMVEMYDSRH-DAWQIIGSMPVEFAVRLTVWTPNESVCTRGM-LYWITS---ARAYSVIGFDIESNTWRELSAPMADR-- 242 (373)
Q Consensus 170 ~~~~~yd~~~-~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~-ly~~gg---~~~~~i~~yd~~~~~w~~~~~~~p~~-- 242 (373)
..++++|..+ ++-+.+...+. ..... ..+++-+|+ |++... .....|..+|+.+++...+ ......
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~-----~~~~~-~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~ 335 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKE-----QDIYL-ARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL-AHETSPTW 335 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSC-----SSEEE-EEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEE-EEEECSSC
T ss_pred eEEEEEECCCCCceEEecCCCC-----cceEE-EEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEE-EEcCCCCc
Confidence 4788889887 76544432100 00101 111224554 444431 2356899999999887665 222211
Q ss_pred --CCceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 243 --LEFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 243 --~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
....-...-+|++++.+.. +....+|.++.
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~ 367 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSER-TGFQHLYRIDS 367 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECT-TSSCEEEEECS
T ss_pred CCcCCceEECCCCeEEEEecC-CCccEEEEEcC
Confidence 0111223347776555543 33358888874
No 239
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.09 E-value=8.1 Score=32.87 Aligned_cols=144 Identities=10% Similarity=0.051 Sum_probs=71.2
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCce-eeecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAW-QIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~ 227 (373)
++.++.|+.+ ..+.+||..+++- +.+..-. ..-..+++. ++.+.+.+ .....|..+|+
T Consensus 77 g~~l~s~s~D----------~~v~~wd~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~l~s~-s~D~~i~vwd~ 136 (319)
T 3frx_A 77 GAYALSASWD----------KTLRLWDVATGETYQRFVGHK---------SDVMSVDIDKKASMIISG-SRDKTIKVWTI 136 (319)
T ss_dssp SSEEEEEETT----------SEEEEEETTTTEEEEEEECCS---------SCEEEEEECTTSCEEEEE-ETTSCEEEEET
T ss_pred CCEEEEEeCC----------CEEEEEECCCCCeeEEEccCC---------CcEEEEEEcCCCCEEEEE-eCCCeEEEEEC
Confidence 5555666554 4689999987652 2221110 000111121 34554443 44567888898
Q ss_pred CCCcEEecccCCCCCCCceeEEEEC------CEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCC
Q 046684 228 ESNTWRELSAPMADRLEFATLVSRN------QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASW 301 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~~------g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~ 301 (373)
..+.-..+ .... .....+.... +..+++.+..+..+.+|++.. ......+..-. ..
T Consensus 137 ~~~~~~~~-~~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~------~~~~~~~~~h~---------~~ 198 (319)
T 3frx_A 137 KGQCLATL-LGHN--DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ------FQIEADFIGHN---------SN 198 (319)
T ss_dssp TSCEEEEE-CCCS--SCEEEEEECCC------CCEEEEEETTSCEEEEETTT------TEEEEEECCCC---------SC
T ss_pred CCCeEEEE-eccC--CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc------chhheeecCCC---------Cc
Confidence 76554443 1111 1111111111 222344444555689999854 23333322110 00
Q ss_pred CceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 302 GGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 302 ~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....+...++..++.++..+.+.+||+. ++
T Consensus 199 v~~~~~sp~g~~l~s~~~dg~i~iwd~~--~~ 228 (319)
T 3frx_A 199 INTLTASPDGTLIASAGKDGEIMLWNLA--AK 228 (319)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETT--TT
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECC--CC
Confidence 0122333466777778888889999999 77
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.06 E-value=13 Score=35.22 Aligned_cols=174 Identities=11% Similarity=0.113 Sum_probs=90.7
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEEC-CCCc--eeeecCCCcccc-ccceeccCCceEE--ECCE----EEEEEcCCc
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDS-RHDA--WQIIGSMPVEFA-VRLTVWTPNESVC--TRGM----LYWITSARA 219 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~-~~~~--W~~~~~~p~~~~-~~~~~~~~~~~~~--~~g~----ly~~gg~~~ 219 (373)
++||+..... ..++.+|. ++++ |+.-...+.... .+.........++ .+++ +|+.. ..
T Consensus 63 g~vyv~~~~~----------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t--~d 130 (599)
T 1w6s_A 63 GKMYIHTSFP----------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ--LD 130 (599)
T ss_dssp TEEEEECSTT----------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC--TT
T ss_pred CEEEEEeCCC----------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc--CC
Confidence 8888876411 35888998 7765 987554421100 0000111233455 6787 88863 45
Q ss_pred eEEEEEECCCCc--EEecccCCCC--CCCceeEEEECCEEEEEEeec----CCceEEEEeecCCCCCCeEEEEeechhhh
Q 046684 220 YSVIGFDIESNT--WRELSAPMAD--RLEFATLVSRNQKLTLIGGTC----GGDACVWELSEGGDDDIWCLIEKVPIEMG 291 (373)
Q Consensus 220 ~~i~~yd~~~~~--w~~~~~~~p~--~~~~~~~~~~~g~l~~~gg~~----~~~~~i~~~~~~~~~~~W~~v~~~p~~~~ 291 (373)
..++++|.++++ |+.- ...+. ......-++.+|.+|+..+.. ...+..++.++ .+..|+.-..-+....
T Consensus 131 g~l~AlDa~TG~~~W~~~-~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~T--G~~~W~~~~~~~~~~~ 207 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVE-NSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT--GEQVWRAYATGPDKDL 207 (599)
T ss_dssp SEEEEEETTTCCEEEEEE-CCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT--CCEEEEEESSSCHHHH
T ss_pred CEEEEEECCCCCEEEeec-CCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCC--CcEEEEEcCCCCcccc
Confidence 789999998774 7754 22111 111223345688877644211 12345555544 4455776433222100
Q ss_pred --------------------h-----hh-cCCCCCCCceEEEecCCEEEEEEcC---------------CccEEEEEccc
Q 046684 292 --------------------M-----RL-SGGKASWGGTRCAAGNGAICLYREV---------------GLGMIIWREDE 330 (373)
Q Consensus 292 --------------------~-----~~-~~~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~~yd~~~ 330 (373)
. .. .++-..+........++.||+-.+. ...++..|++
T Consensus 208 ~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~- 286 (599)
T 1w6s_A 208 LLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD- 286 (599)
T ss_dssp TBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT-
T ss_pred ccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC-
Confidence 0 00 0000011122333457788876543 2479999999
Q ss_pred cCCcccEEEe
Q 046684 331 DKRKWEWVWV 340 (373)
Q Consensus 331 ~~~~~~W~~~ 340 (373)
+++..|+.-
T Consensus 287 -TG~~~W~~q 295 (599)
T 1w6s_A 287 -TGEAKFGYQ 295 (599)
T ss_dssp -TCCEEEEEE
T ss_pred -CCceeeEee
Confidence 998888753
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=90.04 E-value=9.6 Score=33.61 Aligned_cols=67 Identities=13% Similarity=-0.069 Sum_probs=39.7
Q ss_pred ceEEEEEecCC-Ce-eEEEEeCCCCCcc-ccCCCCCCCCceeEEeeCcEEEEeeCC-------CCceEEEEEcCcccce
Q 046684 51 AWFLALPTRNR-GL-CCYVHNPVSDKWH-VLSLDFLPYPVRPVSSIGSFLLLRPIN-------STILQLVLCNPFTRQF 119 (373)
Q Consensus 51 ~~l~~~~~~~~-~~-~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~~g~l~~~gg~-------~~~~~~~v~np~t~~w 119 (373)
..+++.....+ .. .+.++|+.+.+-. .++....| ...+..-+..+|+.... ...+.+.++|+.|++-
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 44555433322 12 7778998886543 33444444 33344446678887521 1246799999999874
No 242
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.81 E-value=15 Score=35.48 Aligned_cols=141 Identities=11% Similarity=0.065 Sum_probs=68.9
Q ss_pred EEEEEcCcc-cceeccCCCC-CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeee
Q 046684 108 QLVLCNPFT-RQFRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQII 185 (373)
Q Consensus 108 ~~~v~np~t-~~w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~ 185 (373)
.++++|..+ ++-+.+.... .......++. .++ ..|++... + .......++++|..+++.+.+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg---------~~l~~~~~-~-----~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP---------QHLSFQRQ-S-----RDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET---------TEEEEEEE-E-----TTSSEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC---------CEEEEEEe-c-----ccCCeEEEEEEECCCCceEEE
Confidence 788999988 7765543221 1111122333 321 34444432 1 122346789999998876655
Q ss_pred cCCCccccccceec-cCCceEE-ECCEEEEEEcCC-ceEEEEEECCCCcEEecccCCCCCCCceeE--EEECCE-EEEEE
Q 046684 186 GSMPVEFAVRLTVW-TPNESVC-TRGMLYWITSAR-AYSVIGFDIESNTWRELSAPMADRLEFATL--VSRNQK-LTLIG 259 (373)
Q Consensus 186 ~~~p~~~~~~~~~~-~~~~~~~-~~g~ly~~gg~~-~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~--~~~~g~-l~~~g 259 (373)
..... .... .....++ -+|++++.+... ...++.+|...+ ...+ ... ......+ ..-+|+ |++.+
T Consensus 328 ~~~~~-----~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~--~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 328 AHETS-----PTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL-THG--NWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp EEEEC-----SSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES-CCS--SSCEEEEEEEETTTTEEEEEE
T ss_pred EEcCC-----CCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee-eec--ceEEEeEeEEeCCCCEEEEEE
Confidence 32210 0000 0012222 367766665322 357888887666 5555 221 1111122 233554 55555
Q ss_pred eecCC-ceEEEEeec
Q 046684 260 GTCGG-DACVWELSE 273 (373)
Q Consensus 260 g~~~~-~~~i~~~~~ 273 (373)
..++. .+.+|..+.
T Consensus 399 ~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 399 GIESARESQIYAVPL 413 (741)
T ss_dssp CSSCTTCBEEEEEET
T ss_pred eCCCCceEEEEEEEc
Confidence 43321 468999875
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.69 E-value=8.6 Score=32.58 Aligned_cols=192 Identities=6% Similarity=-0.146 Sum_probs=94.6
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
.+|.||+.... ...++++|+.++.-...+ .+. .+...... + + +++|+..... ....+
T Consensus 41 ~~g~lyv~d~~--~~~I~~~d~~g~~~~~~~-~~~---~p~gia~~-~---d-----G~l~vad~~~--------~~~~v 97 (306)
T 2p4o_A 41 PDGTIFVTNHE--VGEIVSITPDGNQQIHAT-VEG---KVSGLAFT-S---N-----GDLVATGWNA--------DSIPV 97 (306)
T ss_dssp TTSCEEEEETT--TTEEEEECTTCCEEEEEE-CSS---EEEEEEEC-T---T-----SCEEEEEECT--------TSCEE
T ss_pred CCCCEEEEeCC--CCeEEEECCCCceEEEEe-CCC---CceeEEEc-C---C-----CcEEEEeccC--------CcceE
Confidence 36778887642 467899999875322221 111 11111221 1 1 6688765221 01357
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceE-EECCEEEEEEcCCceEEEEEECCCCcEEe--cccC----CC--CCC
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESV-CTRGMLYWITSARAYSVIGFDIESNTWRE--LSAP----MA--DRL 243 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~-~~~g~ly~~gg~~~~~i~~yd~~~~~w~~--~~~~----~p--~~~ 243 (373)
..||..+++.+.+...+.. +.....+ ..++.+|+.. .....|+.+|+.+.+-+. .... .+ ...
T Consensus 98 ~~~d~~~g~~~~~~~~~~~-------~~~~g~~~~~~~~~~v~d-~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDA-------IFLNGITPLSDTQYLTAD-SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEEECTTSCEEEEEECTTC-------SCEEEEEESSSSEEEEEE-TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EEEcCCCCeEEEEEeCCCc-------cccCcccccCCCcEEEEE-CCCCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 7888888887766544311 1111112 2345677763 345689999987642211 1000 11 111
Q ss_pred CceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccE
Q 046684 244 EFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGM 323 (373)
Q Consensus 244 ~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
...++..-++.||+.... ...+.+++++..+.....+.+..... + .-.++..++.||+.....+.|
T Consensus 170 ~pngis~dg~~lyv~d~~-~~~I~~~~~~~~g~~~~~~~~~~~~~-------P------~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 170 AANGLKRFGNFLYVSNTE-KMLLLRIPVDSTDKPGEPEIFVEQTN-------I------DDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp SEEEEEEETTEEEEEETT-TTEEEEEEBCTTSCBCCCEEEEESCC-------C------SSEEEBTTCCEEEECBTTCCE
T ss_pred cCCCcCcCCCEEEEEeCC-CCEEEEEEeCCCCCCCccEEEeccCC-------C------CCeEECCCCCEEEEeCCCCeE
Confidence 222343334578887632 23355555542001011122222110 0 133344467899988777789
Q ss_pred EEEEcc
Q 046684 324 IIWRED 329 (373)
Q Consensus 324 ~~yd~~ 329 (373)
.+||++
T Consensus 236 ~~~~~~ 241 (306)
T 2p4o_A 236 VRIAPD 241 (306)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999987
No 244
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=89.31 E-value=11 Score=33.12 Aligned_cols=188 Identities=7% Similarity=0.017 Sum_probs=87.3
Q ss_pred ceEEEEEcCcc--cceeccCCCC-----CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECC
Q 046684 106 ILQLVLCNPFT--RQFRYLPLLN-----VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSR 178 (373)
Q Consensus 106 ~~~~~v~np~t--~~w~~lp~~~-----~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~ 178 (373)
...++++|+.+ .+-+++.... ..-.-+.+.+..+ ..+. .+||++.... ......+..++..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d-~dg~-----~~L~Vvnh~~------~~s~ielf~~d~~ 149 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID-DDNT-----VYLLVVNHPG------SSSTVEVFKFQEE 149 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC-TTCC-----EEEEEEECST------TCCEEEEEEEETT
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC-CCCc-----EEEEEEECCC------CCCeEEEEEEECC
Confidence 45788899874 3344443211 1223345555443 1222 6788885321 1122344445665
Q ss_pred CCceeeecCCCccccccceeccCCceEEECCEEEEEEcC----------------CceEEEEEECCCCcEEecccCCCCC
Q 046684 179 HDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA----------------RAYSVIGFDIESNTWRELSAPMADR 242 (373)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~----------------~~~~i~~yd~~~~~w~~~~~~~p~~ 242 (373)
++..+.+...... ...+.+...+.-+|.+|+-... ....++.||+. +.+.+...+
T Consensus 150 ~~~~~~~~~~~g~----~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l--- 220 (355)
T 3sre_A 150 EKSLLHLKTIRHK----LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGF--- 220 (355)
T ss_dssp TTEEEEEEEECCT----TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEE---
T ss_pred CCEEEEEeccccC----CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCC---
Confidence 5555544433211 1112222334457888876421 23678899884 344331111
Q ss_pred CCceeEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE-Eec-CCEEEEEEc
Q 046684 243 LEFATLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC-AAG-NGAICLYRE 318 (373)
Q Consensus 243 ~~~~~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~-~~~i~~~~~ 318 (373)
...-+++.. +| .||+..... ..+.+|+++. ..+.........+.. +=.+ +.. +|.+|+...
T Consensus 221 ~~pNGia~spDg~~lYvadt~~-~~I~~~~~~~---~g~l~~~~~~~~~g~-----------PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLA-HKIHVYEKHA---NWTLTPLRVLSFDTL-----------VDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGG-TEEEEEEECT---TSCEEEEEEEECSSE-----------EEEEEECTTTCCEEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCC-CeEEEEEECC---CCcEecCEEEeCCCC-----------CceEEEeCCCCcEEEEec
Confidence 112244443 44 577765433 3356666653 234443333311111 2233 333 478888543
Q ss_pred -CCccEEEEEcc
Q 046684 319 -VGLGMIIWRED 329 (373)
Q Consensus 319 -~~~~~~~yd~~ 329 (373)
....+..||++
T Consensus 286 ~~g~~v~~~~P~ 297 (355)
T 3sre_A 286 PNGMRIFFYDAE 297 (355)
T ss_dssp SCHHHHHSCCTT
T ss_pred CCceEEEEECCC
Confidence 32345555554
No 245
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=89.31 E-value=13 Score=35.21 Aligned_cols=110 Identities=10% Similarity=0.052 Sum_probs=55.8
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+...++.+.....+..+|..+.+.... +..+......+. -+|++++.++. +..+.+|++.. .+- +..+
T Consensus 159 ~~~~l~s~s~D~~v~lwd~~~~~~~~~---l~~H~~~V~~v~fspdg~~las~s~-D~~i~lwd~~~----g~~--~~~~ 228 (611)
T 1nr0_A 159 RPFRIISGSDDNTVAIFEGPPFKFKST---FGEHTKFVHSVRYNPDGSLFASTGG-DGTIVLYNGVD----GTK--TGVF 228 (611)
T ss_dssp SSCEEEEEETTSCEEEEETTTBEEEEE---ECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT----CCE--EEEC
T ss_pred CCeEEEEEeCCCeEEEEECCCCeEeee---eccccCceEEEEECCCCCEEEEEEC-CCcEEEEECCC----CcE--eeee
Confidence 333333344567788888776544322 222222222222 26776666654 44579999865 322 2222
Q ss_pred chhhhhhhcCCCCCCCceEE-EecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRC-AAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
....... .+.... ...+ ...++..++.++.++.+.+||.+ +.
T Consensus 229 ~~~~~~~--~~h~~~-V~~v~~spdg~~l~s~s~D~~v~lWd~~--~~ 271 (611)
T 1nr0_A 229 EDDSLKN--VAHSGS-VFGLTWSPDGTKIASASADKTIKIWNVA--TL 271 (611)
T ss_dssp BCTTSSS--CSSSSC-EEEEEECTTSSEEEEEETTSEEEEEETT--TT
T ss_pred ccccccc--cccCCC-EEEEEECCCCCEEEEEeCCCeEEEEeCC--CC
Confidence 1110000 000010 1222 23366777778777889999998 77
No 246
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.23 E-value=4.4 Score=42.05 Aligned_cols=144 Identities=8% Similarity=-0.004 Sum_probs=75.4
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceee-ecCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEEC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI-IGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~ 227 (373)
++.++.|+.+ ..+.+||..+++-.. +..- . ..-..+++. +|.+.+.+ ...+.|..+|+
T Consensus 627 ~~~l~s~~~d----------~~i~vw~~~~~~~~~~~~~h--------~-~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~ 686 (1249)
T 3sfz_A 627 GQRIASCGAD----------KTLQVFKAETGEKLLDIKAH--------E-DEVLCCAFSSDDSYIATC-SADKKVKIWDS 686 (1249)
T ss_dssp SSEEEEEETT----------SCEEEEETTTCCEEEEECCC--------S-SCEEEEEECTTSSEEEEE-ETTSEEEEEET
T ss_pred CCEEEEEeCC----------CeEEEEECCCCCEEEEeccC--------C-CCEEEEEEecCCCEEEEE-eCCCeEEEEEC
Confidence 5566666554 368999988775322 1111 0 000111221 45555554 34677999999
Q ss_pred CCCcEEecccCCCCCCCceeEEEE-C--CEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCce
Q 046684 228 ESNTWRELSAPMADRLEFATLVSR-N--QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGT 304 (373)
Q Consensus 228 ~~~~w~~~~~~~p~~~~~~~~~~~-~--g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 304 (373)
.+++.... .. .+......+.. . +..+++.+..+..+.+|++.. .. .+..+.... .....
T Consensus 687 ~~~~~~~~-~~--~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~----~~--~~~~~~~h~---------~~v~~ 748 (1249)
T 3sfz_A 687 ATGKLVHT-YD--EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ----KE--CRNTMFGHT---------NSVNH 748 (1249)
T ss_dssp TTCCEEEE-EE--CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS----SS--EEEEECCCS---------SCEEE
T ss_pred CCCceEEE-Ec--CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC----cc--hhheecCCC---------CCEEE
Confidence 88765433 11 12222222222 2 444555555556689999865 33 222222110 00012
Q ss_pred EEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 305 RCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 305 ~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.++..++..++.++..+.+.+||.+ ++
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~--~~ 775 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVR--SA 775 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGG--GT
T ss_pred EEEecCCCEEEEEECCCeEEEEeCC--CC
Confidence 2333456677777777789999998 66
No 247
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.21 E-value=11 Score=32.97 Aligned_cols=195 Identities=7% Similarity=-0.049 Sum_probs=96.1
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
+.+|...++++.+....+.+||+.+.+......... .-..+++ .+ ++++++.++.+ .
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~--~V~~v~f--sp--------dg~~l~s~s~~-----------~ 198 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG--EVKDLHF--ST--------DGKVVAYITGS-----------S 198 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS--CCCEEEE--CT--------TSSEEEEECSS-----------C
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC--ceEEEEE--cc--------CCceEEeccce-----------e
Confidence 446655443332335679999999887644322111 1112222 11 15666655432 3
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCC---ceEEEEEECCCCcEEecc-cCCCCCCCcee
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSAR---AYSVIGFDIESNTWRELS-APMADRLEFAT 247 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~---~~~i~~yd~~~~~w~~~~-~~~p~~~~~~~ 247 (373)
+.+++..++.-........ +..........-+|...+.++.. ...+..+|.......... ...........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFD-----KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp EEEEETTTCCEEEEECCCC-----TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred EEEEEeccCcceeeeecCC-----CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 6677776665432221110 00001111122467766665322 235677777766554331 11122222222
Q ss_pred EEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEE
Q 046684 248 LVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMII 325 (373)
Q Consensus 248 ~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 325 (373)
.+. -+|++++.++. +..+.+|+++. .+.+..+...- .......++..++..++.+..++.|.+
T Consensus 274 ~~~~Spdg~~lasgs~-D~~V~iwd~~~------~~~~~~~~~gH--------~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 274 SMDVDMKGELAVLASN-DNSIALVKLKD------LSMSKIFKQAH--------SFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EEEECTTSCEEEEEET-TSCEEEEETTT------TEEEEEETTSS--------SSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred eEEECCCCCceEEEcC-CCEEEEEECCC------CcEEEEecCcc--------cCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 222 26777666654 44589998854 34554432211 001123334457888888888888999
Q ss_pred EEcc
Q 046684 326 WRED 329 (373)
Q Consensus 326 yd~~ 329 (373)
+|+.
T Consensus 339 w~ip 342 (365)
T 4h5i_A 339 IKLP 342 (365)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9986
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.87 E-value=5.6 Score=33.79 Aligned_cols=106 Identities=9% Similarity=0.046 Sum_probs=61.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+|.+|+.. .....|..||++.+.-... ..+. .-.+++. -+|+||+....... ..++.++. .+.+.+.+..+
T Consensus 42 ~g~lyv~d-~~~~~I~~~d~~g~~~~~~--~~~~--~p~gia~~~dG~l~vad~~~~~-~~v~~~d~--~~g~~~~~~~~ 113 (306)
T 2p4o_A 42 DGTIFVTN-HEVGEIVSITPDGNQQIHA--TVEG--KVSGLAFTSNGDLVATGWNADS-IPVVSLVK--SDGTVETLLTL 113 (306)
T ss_dssp TSCEEEEE-TTTTEEEEECTTCCEEEEE--ECSS--EEEEEEECTTSCEEEEEECTTS-CEEEEEEC--TTSCEEEEEEC
T ss_pred CCCEEEEe-CCCCeEEEECCCCceEEEE--eCCC--CceeEEEcCCCcEEEEeccCCc-ceEEEEcC--CCCeEEEEEeC
Confidence 68899884 3457899999987532222 2221 1223333 26788887643222 24666554 44667766665
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+...+. ...+...++.+|+.....+.++.+|+. ++
T Consensus 114 ~~~~~~----------~g~~~~~~~~~~v~d~~~g~i~~~d~~--~~ 148 (306)
T 2p4o_A 114 PDAIFL----------NGITPLSDTQYLTADSYRGAIWLIDVV--QP 148 (306)
T ss_dssp TTCSCE----------EEEEESSSSEEEEEETTTTEEEEEETT--TT
T ss_pred CCcccc----------CcccccCCCcEEEEECCCCeEEEEeCC--CC
Confidence 432211 122334567788877666789999987 64
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.75 E-value=4.7 Score=38.15 Aligned_cols=121 Identities=11% Similarity=0.089 Sum_probs=65.3
Q ss_pred ceEEECCEEEEEEcCCceEEEEEECCCC--cEEecccCCCCCC------CceeEEEECCEEEEEEeecCCceEEEEeecC
Q 046684 203 ESVCTRGMLYWITSARAYSVIGFDIESN--TWRELSAPMADRL------EFATLVSRNQKLTLIGGTCGGDACVWELSEG 274 (373)
Q Consensus 203 ~~~~~~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~~------~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~ 274 (373)
..++.+|.+|+.... ..+.++|.+++ .|+.- ...+... ...+.+..+++||+... +..+..++.++
T Consensus 63 ~P~v~~g~vyv~~~~--~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--dg~l~AlD~~T- 136 (582)
T 1flg_A 63 QAIVSDGVIYVTASY--SRLFALDAKTGKRLWTYN-HRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--DASVVALNKNT- 136 (582)
T ss_dssp CCEEETTEEEEEETT--TEEEEEESSSCCEEEEEE-CCCCTTCCCSSCSCCCCCEEETTEEEEEET--TTEEEEEESSS-
T ss_pred ccEEECCEEEEEcCC--CCEEEEECCCCcEEEEEc-CCCCcccccccccCCCccEEECCEEEEEeC--CCEEEEEECCC-
Confidence 347789999998532 24999999876 48765 2322110 12344567888887542 22344444444
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec--CC--EEEEEEc-----CCccEEEEEccccCCcccEEE
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG--NG--AICLYRE-----VGLGMIIWREDEDKRKWEWVW 339 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~--~i~~~~~-----~~~~~~~yd~~~~~~~~~W~~ 339 (373)
.+..|+.-..-+.... . ......++.. ++ .||+-.. ..+.+..||.+ +++..|+.
T Consensus 137 -G~~~W~~~~~~~~~~~-~------~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~--tG~~~W~~ 200 (582)
T 1flg_A 137 -GKVVWKKKFADHGAGY-T------MTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPD--TGEEIWMR 200 (582)
T ss_dssp -CCEEEEEECSCGGGTC-B------CCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTT--TCCEEEEE
T ss_pred -CCEEeeecCCCCCcCc-c------cccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECC--CCCEEeec
Confidence 4445875322111100 0 0011222211 12 5655321 24679999999 99778974
No 250
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.42 E-value=11 Score=32.06 Aligned_cols=54 Identities=15% Similarity=0.243 Sum_probs=29.6
Q ss_pred cCCceEEEEEECCCCcEEecccCCCCCCCce-eEEEE-CCEEEEEEeecCCceEEEEeec
Q 046684 216 SARAYSVIGFDIESNTWRELSAPMADRLEFA-TLVSR-NQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~~-~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+.....|..+|+.+.+-... +..+.... .++.. +|++++.++ .+..+.+|++..
T Consensus 172 ~~~d~~i~~wd~~~~~~~~~---~~~h~~~v~~~~~sp~g~~l~s~~-~dg~i~iwd~~~ 227 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQIEAD---FIGHNSNINTLTASPDGTLIASAG-KDGEIMLWNLAA 227 (319)
T ss_dssp EETTSCEEEEETTTTEEEEE---ECCCCSCEEEEEECTTSSEEEEEE-TTCEEEEEETTT
T ss_pred EeCCCEEEEEECCcchhhee---ecCCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 44567788899887654322 11111112 22222 566666554 445589999865
No 251
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=88.23 E-value=12 Score=32.20 Aligned_cols=103 Identities=8% Similarity=-0.070 Sum_probs=57.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
+|.|||.. .....|.++|+....-+.+ ...... .-.++++- +|.||+....... .|+..+. +...=+.+..
T Consensus 90 ~g~ly~~d-~~~~~I~~~~~dG~~~~~l-~~~~~~-~P~giavdp~~g~ly~td~~~~~--~I~r~~~--dG~~~~~~~~ 162 (318)
T 3sov_A 90 GEKLYWTD-SETNRIEVSNLDGSLRKVL-FWQELD-QPRAIALDPSSGFMYWTDWGEVP--KIERAGM--DGSSRFIIIN 162 (318)
T ss_dssp TTEEEEEE-TTTTEEEEEETTSCSCEEE-ECSSCS-SEEEEEEEGGGTEEEEEECSSSC--EEEEEET--TSCSCEEEEC
T ss_pred CCeEEEEE-CCCCEEEEEECCCCcEEEE-EeCCCC-CccEEEEeCCCCEEEEEecCCCC--EEEEEEc--CCCCeEEEEE
Confidence 68999984 4457899999886544433 211111 11234443 6889887632222 4555554 2122122211
Q ss_pred echhhhhhhcCCCCCCCceEEEe--cCCEEEEEEcCCccEEEEEcc
Q 046684 286 VPIEMGMRLSGGKASWGGTRCAA--GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 286 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~yd~~ 329 (373)
... ..+..++. .++.||+.+.....|..+|++
T Consensus 163 --~~l----------~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 163 --SEI----------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp --SSC----------SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --CCC----------CCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 110 01233333 488999999888889999987
No 252
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=87.52 E-value=14 Score=32.17 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=35.9
Q ss_pred CCE-EEEEEcCCceEEEEEECC-CCcEEecc-cCCCC-CCCceeEEE-ECCE-EEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 208 RGM-LYWITSARAYSVIGFDIE-SNTWRELS-APMAD-RLEFATLVS-RNQK-LTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 208 ~g~-ly~~gg~~~~~i~~yd~~-~~~w~~~~-~~~p~-~~~~~~~~~-~~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
+|+ +|+. ......|..||+. +++...+. ...+. ...-..++. -+|+ ||+.. .....+.+|+++. ++.+..
T Consensus 155 dG~~l~~~-~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~--~~g~~~ 230 (365)
T 1jof_A 155 TETYLYSA-DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM-EAGNRICEYVIDP--ATHMPV 230 (365)
T ss_dssp TSSEEEEE-ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECT--TTCCEE
T ss_pred CCCEEEEE-cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE-CCCCeEEEEEEeC--CCCcEE
Confidence 464 5554 3335689999998 67665431 11121 111122222 2564 55543 3344578998875 345543
No 253
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=87.44 E-value=13 Score=31.91 Aligned_cols=216 Identities=12% Similarity=0.104 Sum_probs=99.9
Q ss_pred CCCccccCCCCCCCCceeEEe-eCcEEEEeeCCCCceEEEEEcCcccceeccCCCC-CCCCCCeEEEEEcCCCCCCCCCc
Q 046684 72 SDKWHVLSLDFLPYPVRPVSS-IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLN-VSRTNPAVGIVMEGPAQHGPFPN 149 (373)
Q Consensus 72 ~~~w~~~~~~~~~~~~~~~~~-~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~ 149 (373)
...|..+..+... ....+.. ..+.+++.|. ...++.-.-.-++|+.+.... ...... ..+..++
T Consensus 24 g~~W~~~~~~~~~-~~~~v~~~~~~~~~~~G~---~g~i~~s~DgG~tW~~~~~~~~~~~~~~-~~i~~~~--------- 89 (327)
T 2xbg_A 24 YNPWEAIQLPTTA-TILDMSFIDRHHGWLVGV---NATLMETRDGGQTWEPRTLVLDHSDYRF-NSVSFQG--------- 89 (327)
T ss_dssp SCCEEEEECSCSS-CEEEEEESSSSCEEEEET---TTEEEEESSTTSSCEECCCCCSCCCCEE-EEEEEET---------
T ss_pred CCCceEeecCCCC-cEEEEEECCCCcEEEEcC---CCeEEEeCCCCCCCeECCCCCCCCCccE-EEEEecC---------
Confidence 3568776533222 2222332 2455666554 234555444445798875321 211111 1222222
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceE-EECCEEEEEEcCCceEEEEEECC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESV-CTRGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~-~~~g~ly~~gg~~~~~i~~yd~~ 228 (373)
.++|++|... .++.-+-...+|+.+...+. .+.. ...++ .-++.+|+.+. ...++.-+=.
T Consensus 90 ~~~~~~g~~g-----------~i~~S~DgG~tW~~~~~~~~---~~~~---~~~i~~~~~~~~~~~~~--~g~v~~S~Dg 150 (327)
T 2xbg_A 90 NEGWIVGEPP-----------IMLHTTDGGQSWSQIPLDPK---LPGS---PRLIKALGNGSAEMITN--VGAIYRTKDS 150 (327)
T ss_dssp TEEEEEEETT-----------EEEEESSTTSSCEECCCCTT---CSSC---EEEEEEEETTEEEEEET--TCCEEEESST
T ss_pred CeEEEEECCC-----------eEEEECCCCCCceECccccC---CCCC---eEEEEEECCCCEEEEeC--CccEEEEcCC
Confidence 5678776321 23332222467998864310 0000 01222 34678888752 2334443323
Q ss_pred CCcEEecccCCCCCCCceeEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEE
Q 046684 229 SNTWRELSAPMADRLEFATLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCA 307 (373)
Q Consensus 229 ~~~w~~~~~~~p~~~~~~~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 307 (373)
-++|+.+..+.+. ....++.. ++.+++++. .+ .+|.-.+ +....|+.+........ .....
T Consensus 151 G~tW~~~~~~~~~--~~~~~~~~~~~~~~~~g~-~G---~~~~S~d-~gG~tW~~~~~~~~~~~-----------~~~~~ 212 (327)
T 2xbg_A 151 GKNWQALVQEAIG--VMRNLNRSPSGEYVAVSS-RG---SFYSTWE-PGQTAWEPHNRTTSRRL-----------HNMGF 212 (327)
T ss_dssp TSSEEEEECSCCC--CEEEEEECTTSCEEEEET-TS---SEEEEEC-TTCSSCEEEECCSSSCE-----------EEEEE
T ss_pred CCCCEEeecCCCc--ceEEEEEcCCCcEEEEEC-CC---cEEEEeC-CCCCceeECCCCCCCcc-----------ceeEE
Confidence 5689988433222 22233333 566666552 22 3565544 12578999854221111 12223
Q ss_pred ecCCEEEEEEcCCccEEEEEccccCCcccEEEecc
Q 046684 308 AGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGG 342 (373)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~ 342 (373)
..++.+|+.+.. +.++..+.+ ... +|+.+..
T Consensus 213 ~~~g~~~~~~~~-G~~~~s~~D-~G~--tW~~~~~ 243 (327)
T 2xbg_A 213 TPDGRLWMIVNG-GKIAFSDPD-NSE--NWGELLS 243 (327)
T ss_dssp CTTSCEEEEETT-TEEEEEETT-EEE--EECCCBC
T ss_pred CCCCCEEEEeCC-ceEEEecCC-CCC--eeEeccC
Confidence 346778876643 345555322 034 7887653
No 254
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=87.43 E-value=14 Score=32.22 Aligned_cols=87 Identities=9% Similarity=0.054 Sum_probs=48.6
Q ss_pred CCEEEEEEeecC-------CceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEE
Q 046684 252 NQKLTLIGGTCG-------GDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMI 324 (373)
Q Consensus 252 ~g~l~~~gg~~~-------~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 324 (373)
++++|+...... ....+|..+. .+.+.+..++... .. ...+...|..||+.++ +.+.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~-p~---------~ia~spdg~~l~v~n~--~~v~ 328 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD-AL---------SMTIDQQRNLMLTLDG--GNVN 328 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT-CC---------EEEEETTTTEEEEECS--SCEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC-ee---------EEEECCCCCEEEEeCC--CeEE
Confidence 478888754111 1124554444 4457777776543 21 3444445677777664 7899
Q ss_pred EEEccccCCcccEEEecccccCCCCcccccceeEEEeccc
Q 046684 325 IWREDEDKRKWEWVWVGGCCLTGGKQVQNVPMRGVLLHPS 364 (373)
Q Consensus 325 ~yd~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~p~ 364 (373)
+||.+ +. +-+.+......+.. ..++.+.|.
T Consensus 329 v~D~~--t~--~l~~~~~i~~~G~~------P~~~~~~p~ 358 (361)
T 2oiz_A 329 VYDIS--QP--EPKLLRTIEGAAEA------SLQVQFHPV 358 (361)
T ss_dssp EEECS--SS--SCEEEEEETTSCSS------EEEEEECCC
T ss_pred EEECC--CC--cceeeEEeccCCCC------cEEEEecCC
Confidence 99999 54 22656554322332 345666663
No 255
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.29 E-value=1.6 Score=38.09 Aligned_cols=114 Identities=5% Similarity=0.005 Sum_probs=57.6
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccc--eec-cC---CCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQ--FRY-LP---LLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA 166 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~--w~~-lp---~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~ 166 (373)
.+|+||+... ...++.+|..|++ |+. .. ++-..+... ...+ +.+|++....
T Consensus 9 ~~~~V~v~t~---dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~--------~~~~-----~~~~vv~p~~------- 65 (339)
T 2be1_A 9 LSDILIAADV---EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS--------RLET-----YETLIIEPFG------- 65 (339)
T ss_dssp EEEEEEEEET---TSCEEEEETTTTEEEEEECGGGSCCSEECCCSC--------TTTS-----SEEEEECCST-------
T ss_pred eCCEEEEEeC---CCeEEEEECCCCcEEEEecCCccCCcEEecCCc--------cccC-----CcEEEEEECC-------
Confidence 4667777666 4677888877775 653 22 111111000 0011 5566654211
Q ss_pred cccceEEEEECCCCceeeecCCCccccccceeccCCceEE-------ECCEEEEEEcCCceEEEEEECCCCc--EEe
Q 046684 167 TYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-------TRGMLYWITSARAYSVIGFDIESNT--WRE 234 (373)
Q Consensus 167 ~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-------~~g~ly~~gg~~~~~i~~yd~~~~~--w~~ 234 (373)
.-.++.|+..++.|+.-..+|.....++ .+.....++ .+|.+|+- .....++++|..+++ |+.
T Consensus 66 --dG~l~a~~~~~G~~~~~~~~~~lv~~SP-~~~~~~pvv~~~~~~~~~g~Vy~G--s~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 66 --DGNIYYFNAHQGLQKLPLSIRQLVSTSP-LHLKTNIVVNDSGKIVEDEKVYTG--SMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp --TTEEEEEETTTEEEEEEEEHHHHHTTCS-EEEECC----------CCEEEEEC--EEEEEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEECCCCcEEeeeccccceeccc-cccCCCceeecccccccCCEEEEE--ecCCEEEEEECCCCcEEEEE
Confidence 2367888887776653322221100000 111122233 56777765 467889999999875 554
No 256
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=87.12 E-value=19 Score=33.35 Aligned_cols=101 Identities=6% Similarity=0.045 Sum_probs=49.8
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
+|...+.+ .....|..||...+.-..+ .... ..-..++. -++++++.++ .+..+.+|+.+. ..-..+...
T Consensus 396 dg~~l~~~-~~d~~v~~~~~~~~~~~~~-~~~~--~~v~~~~~s~d~~~l~~~~-~d~~v~~w~~~~----~~~~~~~~~ 466 (577)
T 2ymu_A 396 DGQTIASA-SDDKTVKLWNRNGQLLQTL-TGHS--SSVWGVAFSPDDQTIASAS-DDKTVKLWNRNG----QLLQTLTGH 466 (577)
T ss_dssp TSSCEEEE-ETTSEEEEECTTCCEEEEE-ECCS--SCEEEEEECTTSSEEEEEE-TTSEEEEEETTS----CEEEEEECC
T ss_pred CCCEEEEE-eCCCEEEEEeCCCCEEEEe-cCCC--CCeEEEEECCCCCEEEEEc-CCCEEEEEECCC----CEEEEEcCC
Confidence 45555553 3456788888655443333 1111 11112222 2566555554 444578998643 222222111
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.... ...++..++.+++.++..+.+.+||..
T Consensus 467 ~~~v------------~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 467 SSSV------------RGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp SSCE------------EEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCCE------------EEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 1111 122333466777777777788889865
No 257
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=86.67 E-value=18 Score=32.85 Aligned_cols=188 Identities=12% Similarity=0.103 Sum_probs=96.3
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceec--cCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRY--LPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~--lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
++.+|++.| ++++.||..+++... .|.++. ..+++... +++|.+-|..
T Consensus 158 ~~~~yfFkG----~~yw~yd~~~~~~~~~~w~gi~~----iDAA~~~~----------g~~YfFkG~~------------ 207 (460)
T 1qhu_A 158 DEGILFFQG----NRKWFWDLTTGTKKERSWPAVGN----CTSALRWL----------GRYYCFQGNQ------------ 207 (460)
T ss_dssp SSEEEEEET----TEEEEEETTTTEEEEECCTTSCC----CSEEEEET----------TEEEEEETTE------------
T ss_pred CCeEEEEec----ccEEEEecccceeecccCCCCCc----cchheeeC----------CceEEEECCE------------
Confidence 677888887 578999998876432 122221 23333332 7889887653
Q ss_pred EEEEECCCCceeeecCCCcccc-----cc--------------------ceeccCCceEE--ECCEEEEEEcCCceEEEE
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFA-----VR--------------------LTVWTPNESVC--TRGMLYWITSARAYSVIG 224 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~-----~~--------------------~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~ 224 (373)
.+.||..+++ .....|.... .+ ..+.....++. .+|++|++-| ...+.
T Consensus 208 y~rfd~~~~~--v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg---~~yWR 282 (460)
T 1qhu_A 208 FLRFNPVSGE--VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG---SHYWR 282 (460)
T ss_dssp EEEECTTTCC--CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET---TEEEE
T ss_pred EEEEcCccCc--ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC---CEEEE
Confidence 6777775532 1222221100 00 00011122233 3689999954 46677
Q ss_pred EECCCCcEEe--ccc---CCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCC
Q 046684 225 FDIESNTWRE--LSA---PMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKA 299 (373)
Q Consensus 225 yd~~~~~w~~--~~~---~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~ 299 (373)
+|...+.+.. +.. .+|... -.+...++++|++-|. ++|.++. . ...+.+..-|......+. ...
T Consensus 283 ~~~~~~~~~p~~Is~~WpglP~~I--DAAf~~~~~~yfFkG~-----~yw~f~~--~-~g~~~~~GyPK~I~~~lG-lp~ 351 (460)
T 1qhu_A 283 LDTNRDGWHSWPIAHQWPQGPSTV--DAAFSWEDKLYLIQDT-----KVYVFLT--K-GGYTLVNGYPKRLEKELG-SPP 351 (460)
T ss_dssp CTTGGGCCCCEEGGGTCTTSCSSC--SEEEEETTEEEEEETT-----EEEEEEC--S-BSCEECTTCCEEHHHHHC-CCS
T ss_pred EecCCCCcCccchhhhccCCCCCC--cEEEEECCeEEEEeCC-----EEEEEeC--C-CCceecCCCCeEHHHhcc-CCC
Confidence 7765433211 100 112221 2333458899998763 5787764 1 124444333444332221 100
Q ss_pred C----CCceEEEe-cCCEEEEEEcCCccEEEEEcc
Q 046684 300 S----WGGTRCAA-GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 300 ~----~~~~~~~~-~~~~i~~~~~~~~~~~~yd~~ 329 (373)
. ....++.. ..+++|++.|. ..+.||..
T Consensus 352 ~~~~~~IDAA~~~~~~~ktyfFkG~--~ywryd~~ 384 (460)
T 1qhu_A 352 VISLEAVDAAFVCPGSSRLHIMAGR--RLWWLDLK 384 (460)
T ss_dssp SCCCSCCCEEECCTTCCEEEEEETT--EEEEEEGG
T ss_pred ccccCcccEEEEeCCCCEEEEEECC--EEEEEECC
Confidence 1 01223322 46899999877 59999988
No 258
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=86.64 E-value=20 Score=33.17 Aligned_cols=101 Identities=7% Similarity=0.034 Sum_probs=51.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEee
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
++...+.+ .....+..||...+.-..+ .... ..-..++. -++++++.++ .+..+.+|+.+. + .+..+
T Consensus 437 d~~~l~~~-~~d~~v~~w~~~~~~~~~~-~~~~--~~v~~~~~spd~~~las~~-~d~~i~iw~~~~----~---~~~~~ 504 (577)
T 2ymu_A 437 DDQTIASA-SDDKTVKLWNRNGQLLQTL-TGHS--SSVRGVAFSPDGQTIASAS-DDKTVKLWNRNG----Q---LLQTL 504 (577)
T ss_dssp TSSEEEEE-ETTSEEEEEETTSCEEEEE-ECCS--SCEEEEEECTTSCEEEEEE-TTSEEEEEETTS----C---EEEEE
T ss_pred CCCEEEEE-cCCCEEEEEECCCCEEEEE-cCCC--CCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCC----C---EEEEE
Confidence 45555553 3456788888766554444 1111 11112222 2667666554 444578998532 2 22222
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..-. ......++..++.+++.++..+.+.+||..
T Consensus 505 ~~h~---------~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 505 TGHS---------SSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp ECCS---------SCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred eCCC---------CCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 2100 000123333466667777777789999976
No 259
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=86.49 E-value=1 Score=43.81 Aligned_cols=106 Identities=8% Similarity=-0.099 Sum_probs=56.6
Q ss_pred ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE--ECCEEEEEEeecCCceEEEEeecCCCCCCeEEEE
Q 046684 207 TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS--RNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 207 ~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~--~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~ 284 (373)
.++.|||.. .....|.++|+....-..+ ....... -.++++ .+|.||+....... .|+..+. +...-+.+.
T Consensus 463 ~~g~LY~tD-~~~~~I~v~d~dg~~~~~l-~~~~~~~-P~giavDp~~g~ly~td~~~~~--~I~~~~~--dG~~~~~l~ 535 (699)
T 1n7d_A 463 IHSNIYWTD-SVLGTVSVADTKGVKRKTL-FREQGSK-PRAIVVDPVHGFMYWTDWGTPA--KIKKGGL--NGVDIYSLV 535 (699)
T ss_dssp SSSBCEECC-TTTSCEEEEBSSSCCEEEE-CCCSSCC-CCCEECCSSSSCCEECCCSSSC--CEEBCCS--SSCCCCEES
T ss_pred eCCcEEEEe-ccCCeEEEEecCCCceEEE-EeCCCCC-cceEEEccCCCcEEEcccCCCC--eEEEEeC--CCCCeeEEE
Confidence 468999983 4457799999987665544 2211111 123333 36788876532212 3554443 112111111
Q ss_pred eechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 285 KVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 285 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
. .. +. ...+.++...++.||+.......|.++|++
T Consensus 536 ~--~~-l~-------~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 536 T--EN-IQ-------WPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp C--SS-CS-------SCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred e--CC-CC-------CccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 1 00 00 000233333578999999888889999997
No 260
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=86.22 E-value=24 Score=33.62 Aligned_cols=191 Identities=6% Similarity=-0.034 Sum_probs=98.7
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccc-eeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQ-FRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~-w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
..++.||+..-. ...+..+++.... +..+-. .....+.-.+++- .+ ++||+.... ..
T Consensus 49 ~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~--~~~~~P~GlAvD~-~~-------~~ly~~d~~----------~~ 106 (619)
T 3s94_A 49 FSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVV--SGLLSPDGLACDW-LG-------EKLYWTDSE----------TN 106 (619)
T ss_dssp TTTTEEEEEETT--TTEEEEEEC-----CEEEEC--SSCSCEEEEEEET-TT-------TEEEEEETT----------TT
T ss_pred eCCCEEEEEECC--CCeEEEEEccCCCceEEEEe--CCCCCcCeEEEEe-cC-------CEEEEEeCC----------CC
Confidence 348899987653 4678888876542 222111 1111222223331 11 778887532 25
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEE--ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC--TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATL 248 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~--~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~ 248 (373)
.+++++.....=+.+..-. .......++ .+|.|||........|...++....-..+ ..... ..-.++
T Consensus 107 ~I~v~~~dG~~~~~l~~~~--------l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l-~~~~~-~~P~Gl 176 (619)
T 3s94_A 107 RIEVSNLDGSLRKVLFWQE--------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII-INSEI-YWPNGL 176 (619)
T ss_dssp EEEEEETTSCSCEEEECSS--------CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE-ECSSC-SSEEEE
T ss_pred EEEEEECCCCCEEEEEeCC--------CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE-EeCCC-CCCcEE
Confidence 7888988654322332110 011223344 25899998533357899999886554444 22111 111234
Q ss_pred EEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEE
Q 046684 249 VSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIW 326 (373)
Q Consensus 249 ~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~y 326 (373)
+.- +++||++.... . .|+..+.. .......+. .... .+.++...++.||+.+.....|...
T Consensus 177 ald~~~~~LY~aD~~~-~--~I~~~~~d-G~~~~~~~~----~~~~---------~P~gi~~~~~~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 177 TLDYEEQKLYWADAKL-N--FIHKSNLD-GTNRQAVVK----GSLP---------HPFALTLFEDILYWTDWSTHSILAC 239 (619)
T ss_dssp EEETTTTEEEEEETTT-C--CEEEESSS-CCEEC----------------------CCCEEESSSEEEEECTTTCSEEEE
T ss_pred EEEccCCEEEEEeCCC-C--eEEEecCC-CCccEEEEe----CCCC---------CceEEEEeCCEEEEecCCCCEEEEE
Confidence 443 68999986432 2 34544431 112222211 1111 1466677788999998888889999
Q ss_pred EccccCC
Q 046684 327 REDEDKR 333 (373)
Q Consensus 327 d~~~~~~ 333 (373)
|.. ++
T Consensus 240 d~~--tg 244 (619)
T 3s94_A 240 NKY--TG 244 (619)
T ss_dssp ESS--SC
T ss_pred ECC--CC
Confidence 997 65
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.07 E-value=19 Score=32.40 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=59.6
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCE-EEEEEeecCC-ceEEEEeecCCCCCCeEEEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQK-LTLIGGTCGG-DACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~-l~~~gg~~~~-~~~i~~~~~~~~~~~W~~v~ 284 (373)
+|.||+.... ..|..+|+++++...+ .+ ... .-.+++. .+|. ||+.....+. ...++.+.. ...|....
T Consensus 149 ~g~Lyv~d~~--~~I~~id~~~~~v~~~-~~-~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~---~g~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQ--HPTRLIDFEKEYVSTV-YS-GLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTR---ESGFKVIT 220 (430)
T ss_dssp EEEEEEEEBT--EEEEEEETTTTEEEEE-EC-CCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG---GGTSCSEE
T ss_pred CCeEEEEeCC--CcEEEEECCCCEEEEE-ec-CCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeC---CCceeeee
Confidence 4889998532 8899999999888777 33 111 1123333 2454 8888753322 122333332 13343222
Q ss_pred eechhhhhhhcCCCCCCCceEE-Eec-CCEEEEEEcCCccEEEEEccccCC
Q 046684 285 KVPIEMGMRLSGGKASWGGTRC-AAG-NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 285 ~~p~~~~~~~~~~~~~~~~~~~-~~~-~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.++. +.. +..+ +.. ++.||+.....+.++.||++ +.
T Consensus 221 ~l~~--~~~---------p~giavdp~~g~lyv~d~~~~~V~~~~~~--~~ 258 (430)
T 3tc9_A 221 ELTK--GQN---------CNGAETHPINGELYFNSWNAGQVFRYDFT--TQ 258 (430)
T ss_dssp EEEE--CSS---------CCCEEECTTTCCEEEEETTTTEEEEEETT--TT
T ss_pred eecc--CCC---------ceEEEEeCCCCEEEEEECCCCEEEEEECC--CC
Confidence 2221 100 2222 333 78999998777889999998 77
No 262
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=85.99 E-value=24 Score=33.58 Aligned_cols=213 Identities=8% Similarity=-0.011 Sum_probs=115.7
Q ss_pred eeEEEEeCCCCCccc-cCCCCCCCCceeEE--eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEc
Q 046684 63 LCCYVHNPVSDKWHV-LSLDFLPYPVRPVS--SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVME 139 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~--~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~ 139 (373)
..+...|.....-.. ++...+.. ...++ ..++.||..... ...+..+++.......+-.... .....+++-..
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~-~~~l~~d~~~~~lywtD~~--~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~ 90 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKE-ASALDFDVTDNRIYWTDIS--LKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWL 90 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSC-EEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC-SCCCEEEEETT
T ss_pred CcEEEEECCCCCcceEEEcCCCCc-eEEEEEECCCCEEEEEECC--CCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeC
Confidence 456667776543222 22222222 22233 347899998753 4678888887655444322111 11123333211
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeec--CCCccccccceeccCCceEEE--CCEEEEEE
Q 046684 140 GPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIG--SMPVEFAVRLTVWTPNESVCT--RGMLYWIT 215 (373)
Q Consensus 140 ~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~~~~~~~~~~~~~~~--~g~ly~~g 215 (373)
. ++||+.-.. ...+++++.....=+.+. .+. .....++- +|.|||.-
T Consensus 91 ~---------~~LY~tD~~----------~~~I~v~~~dG~~~~~l~~~~l~----------~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 91 G---------KNLYWADTG----------TNRIEVSKLDGQHRQVLVWKDLD----------SPRALALDPAEGFMYWTE 141 (628)
T ss_dssp T---------TEEEEEETT----------TTEEEEEETTSTTCEEEECSSCC----------CEEEEEEETTTTEEEEEE
T ss_pred C---------CEEEEEECC----------CCEEEEEecCCCcEEEEEeCCCC----------CcccEEEccCCCeEEEeC
Confidence 1 789887432 257889988654322222 121 11233443 58999985
Q ss_pred cCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhh
Q 046684 216 SARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMR 293 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~ 293 (373)
......|..+++....-+.+ .. .-..-.+++.- +++||++.... ..+...+++. ... +.+... .
T Consensus 142 ~g~~~~I~r~~~dG~~~~~l-~~--~~~~P~GlalD~~~~~LY~aD~~~-~~I~~~d~dG---~~~-~v~~~~----l-- 207 (628)
T 4a0p_A 142 WGGKPKIDRAAMDGSERTTL-VP--NVGRANGLTIDYAKRRLYWTDLDT-NLIESSNMLG---LNR-EVIADD----L-- 207 (628)
T ss_dssp CSSSCEEEEEETTSCSCEEE-EC--SCSSEEEEEEETTTTEEEEEETTT-TEEEEEETTS---CSC-EEEEEC----C--
T ss_pred CCCCCEEEEEeCCCCceEEE-EC--CCCCcceEEEccccCEEEEEECCC-CEEEEEcCCC---Cce-EEeecc----C--
Confidence 33367899999987665555 22 11111234433 68999987432 2344555432 222 332210 1
Q ss_pred hcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 294 LSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
..+.+++..++.||+.+...+.|...|..
T Consensus 208 -------~~P~glav~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 208 -------PHPFGLTQYQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp -------SCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred -------CCceEEEEECCEEEEecCCCCEEEEEECC
Confidence 11577777889999999877889999976
No 263
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=85.50 E-value=8.6 Score=34.06 Aligned_cols=58 Identities=22% Similarity=0.281 Sum_probs=40.2
Q ss_pred eEEECCEEEEEE-c---CC-ceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEee
Q 046684 204 SVCTRGMLYWIT-S---AR-AYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGT 261 (373)
Q Consensus 204 ~~~~~g~ly~~g-g---~~-~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~ 261 (373)
+-+++|.||+.. | .. ...+..=+...+.|+.+..|...+....-.+..++.||++|..
T Consensus 344 vkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 456899999997 2 12 2355566666788998855544444555577889999999864
No 264
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=85.47 E-value=15 Score=30.78 Aligned_cols=33 Identities=9% Similarity=0.241 Sum_probs=22.0
Q ss_pred CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeech
Q 046684 252 NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPI 288 (373)
Q Consensus 252 ~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~ 288 (373)
++++++.++ .+..+.+|+++. .+.|..+..+..
T Consensus 317 ~~~~l~s~~-~dg~v~iw~~~~---~~~~~~~~~~~~ 349 (351)
T 3f3f_A 317 TGTILSSAG-DDGKVRLWKATY---SNEFKCMSVITA 349 (351)
T ss_dssp SSCCEEEEE-TTSCEEEEEECT---TSCEEEEEEEC-
T ss_pred CCCEEEEec-CCCcEEEEecCc---Ccchhheeehcc
Confidence 466555554 444589999975 467888877653
No 265
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=85.42 E-value=19 Score=31.86 Aligned_cols=26 Identities=8% Similarity=0.271 Sum_probs=19.5
Q ss_pred EEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 306 CAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 306 ~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+...++..++.++..+.+.+||.+ ++
T Consensus 349 ~~s~~~~~l~s~s~dg~v~iwd~~--~~ 374 (447)
T 3dw8_B 349 CWNGSDSVVMTGSYNNFFRMFDRN--TK 374 (447)
T ss_dssp EECTTSSEEEEECSTTEEEEEETT--TC
T ss_pred EECCCCCEEEEeccCCEEEEEEcC--CC
Confidence 344455556778888889999999 77
No 266
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=85.13 E-value=16 Score=30.73 Aligned_cols=195 Identities=9% Similarity=0.043 Sum_probs=93.6
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEE
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVE 173 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~ 173 (373)
++.||+.+.. ...++.+++ +++.+.+... ... ...+..++ + +++|+.... ...+.
T Consensus 56 g~~l~~~d~~--~~~i~~~~~-~g~~~~~~~~---~~~-~~gl~~d~---d-----G~l~v~~~~----------~~~v~ 110 (305)
T 3dr2_A 56 QRTLVWSDLV--GRRVLGWRE-DGTVDVLLDA---TAF-TNGNAVDA---Q-----QRLVHCEHG----------RRAIT 110 (305)
T ss_dssp GTEEEEEETT--TTEEEEEET-TSCEEEEEES---CSC-EEEEEECT---T-----SCEEEEETT----------TTEEE
T ss_pred CCEEEEEECC--CCEEEEEeC-CCCEEEEeCC---CCc-cceeeECC---C-----CCEEEEECC----------CCEEE
Confidence 3446665543 456888888 4544333211 111 12222221 1 667775422 13578
Q ss_pred EEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEE----EcC------------CceEEEEEECCCCcEEecc
Q 046684 174 MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWI----TSA------------RAYSVIGFDIESNTWRELS 236 (373)
Q Consensus 174 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~----gg~------------~~~~i~~yd~~~~~w~~~~ 236 (373)
+|+.. ++.+.+...... ........+++ -+|.+|+. |.. ....|+.||+++++...+
T Consensus 111 ~~~~~-g~~~~~~~~~~~----~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~- 184 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAG----KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM- 184 (305)
T ss_dssp EECTT-SCEEEEECEETT----EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-
T ss_pred EECCC-CCEEEEEeccCC----CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-
Confidence 88875 666555332110 00011112222 26888884 211 136799999998888776
Q ss_pred cCCCCCCCceeEEEE-CCE-EEEEEeec----CCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecC
Q 046684 237 APMADRLEFATLVSR-NQK-LTLIGGTC----GGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGN 310 (373)
Q Consensus 237 ~~~p~~~~~~~~~~~-~g~-l~~~gg~~----~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
. .... -.+++.. +|+ ||+..... ...+.+|+++. +........... ....+ ...++..+
T Consensus 185 ~--~~~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~----~~l~~~~~~~~~--~~~~p------dgi~~d~~ 249 (305)
T 3dr2_A 185 A--DLDH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD----GALHDRRHFASV--PDGLP------DGFCVDRG 249 (305)
T ss_dssp E--EESS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEET----TEEEEEEEEECC--SSSCC------CSEEECTT
T ss_pred e--cCCC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC----CCccCCeEEEEC--CCCCC------CeEEECCC
Confidence 2 1111 1233333 454 77765432 13366666654 322221111100 00000 12334446
Q ss_pred CEEEEEEcCCccEEEEEccccCCcccEEEe
Q 046684 311 GAICLYREVGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 311 ~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
+.||+.. ...|.+||++ .+ .-..+
T Consensus 250 G~lwv~~--~~gv~~~~~~--g~--~~~~~ 273 (305)
T 3dr2_A 250 GWLWSSS--GTGVCVFDSD--GQ--LLGHI 273 (305)
T ss_dssp SCEEECC--SSEEEEECTT--SC--EEEEE
T ss_pred CCEEEec--CCcEEEECCC--CC--EEEEE
Confidence 6788765 3369999998 66 44444
No 267
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=85.00 E-value=18 Score=31.24 Aligned_cols=118 Identities=8% Similarity=-0.065 Sum_probs=56.5
Q ss_pred CCEEEEEEcCCceE-EEEEECCCCcEEecccCCCCCCCce-eEEEE-CCEEEEEEeecCCceEEEEeecCCCCCCeEEEE
Q 046684 208 RGMLYWITSARAYS-VIGFDIESNTWRELSAPMADRLEFA-TLVSR-NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 208 ~g~ly~~gg~~~~~-i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~~-~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~ 284 (373)
+|.+.+.++ .... |..+|+.+.+-... .....+.... .++.. +|++++.++ .+..+.+|++.. +...++..+.
T Consensus 206 ~g~~l~s~s-~d~~~v~iwd~~~~~~~~~-~~~g~h~~~v~~~~~s~~~~~l~s~s-~d~~v~iw~~~~-~~~~~~~~~~ 281 (355)
T 3vu4_A 206 KSDMVATCS-QDGTIIRVFKTEDGVLVRE-FRRGLDRADVVDMKWSTDGSKLAVVS-DKWTLHVFEIFN-DQDNKRHALK 281 (355)
T ss_dssp TSSEEEEEE-TTCSEEEEEETTTCCEEEE-EECTTCCSCEEEEEECTTSCEEEEEE-TTCEEEEEESSC-CSCCCSEETT
T ss_pred CCCEEEEEe-CCCCEEEEEECCCCcEEEE-EEcCCCCCcEEEEEECCCCCEEEEEE-CCCEEEEEEccC-CCCccccccc
Confidence 466555543 4454 89999987654332 1111011112 22222 566655554 445589999976 1223333321
Q ss_pred e--echhh---h----hhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 285 K--VPIEM---G----MRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 285 ~--~p~~~---~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
. ++.-. . ..+...........+...+|..++++..++.+..|+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 282 GWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp TTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred ceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 1 00000 0 00000000001233444567777777777788888876
No 268
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.32 E-value=32 Score=33.46 Aligned_cols=189 Identities=8% Similarity=0.058 Sum_probs=98.3
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
-.+|.|++... .-+.+||+.++++.. +..... .... .+... + +.|++.. . ..
T Consensus 71 d~~g~lWigT~----~Gl~~yd~~~~~f~~-~~~~~~-~~i~-~i~~~----~-----g~lWigt--~----------~G 122 (758)
T 3ott_A 71 IDNTYLYMGTD----NGILVYNYRADRYEQ-PETDFP-TDVR-TMALQ----G-----DTLWLGA--L----------NG 122 (758)
T ss_dssp ETTTEEEEEET----TEEEEEETTTTEECC-CSCCCC-SCEE-EEEEE----T-----TEEEEEE--T----------TE
T ss_pred cCCCcEEEEeC----CCeEEEeCCCCEEEC-cccCCC-ceEE-EEEec----C-----CcEEEEc--C----------Cc
Confidence 44788888664 458899999988765 211111 1111 12221 1 6677642 1 25
Q ss_pred EEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCC---ce
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLE---FA 246 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~---~~ 246 (373)
+..||..+++.+.....+. ............ +|.+++.. . ..+..||+.++++..+..+...... -.
T Consensus 123 l~~~~~~~~~~~~~~~~~~-----~l~~~~i~~i~~d~~g~lWigt-~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 194 (758)
T 3ott_A 123 LYTYQLQSRKLTSFDTRRN-----GLPNNTIYSIIRTKDNQIYVGT-Y--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVN 194 (758)
T ss_dssp EEEEETTTCCEEEECHHHH-----CCSCSCEEEEEECTTCCEEEEE-T--TEEEEEETTTTEEEEECCCCCTTCSSCCEE
T ss_pred ceeEeCCCCeEEEeccCCC-----CcCCCeEEEEEEcCCCCEEEEe-C--CCHhhCccCCCceEEecCCCccccccceeE
Confidence 8899998888776521100 000011111223 46776642 2 4789999999988766222211111 12
Q ss_pred eEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEE
Q 046684 247 TLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMI 324 (373)
Q Consensus 247 ~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 324 (373)
.+..- ++ .|++.. .. .+..+++ .+.++.....++.... ...+...++.|++.. ...+.
T Consensus 195 ~i~~d~~~~~lWigt-~~--Gl~~~~~----~~~~~~~~~~l~~~~i-----------~~i~~d~~g~lWigT--~~Gl~ 254 (758)
T 3ott_A 195 SLLEDTTRQCVWIGT-EG--YLFQYFP----STGQIKQTEAFHNNSI-----------KSLALDGNGDLLAGT--DNGLY 254 (758)
T ss_dssp EEEEETTTTEEEEEE-EE--EEEEEET----TTTEEEEEEEEEEEEE-----------EEEEECTTCCEEEEE--TTEEE
T ss_pred EEEEECCCCEEEEEE-CC--CCeEEcC----CCCeEEeccCCCCCeE-----------EEEEEcCCCCEEEEe--CCcee
Confidence 23333 23 466643 22 2344444 4466766554432211 122233467788754 24688
Q ss_pred EEEccccCCcccEEEe
Q 046684 325 IWREDEDKRKWEWVWV 340 (373)
Q Consensus 325 ~yd~~~~~~~~~W~~~ 340 (373)
.||++ ++ +++.+
T Consensus 255 ~~~~~--~~--~~~~~ 266 (758)
T 3ott_A 255 VYHND--TT--PLQHI 266 (758)
T ss_dssp EECCT--TS--CCEEE
T ss_pred EEecC--CC--cEEEE
Confidence 99998 87 66554
No 269
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=83.99 E-value=30 Score=32.90 Aligned_cols=190 Identities=7% Similarity=-0.037 Sum_probs=103.4
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceE
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMV 172 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~ 172 (373)
.+|.||+.... ...+..+++.......+-.... ....++++-... ++||+.-.. ...+
T Consensus 359 ~~~~ly~sD~~--~~~I~r~~~~g~~~~~v~~~~~-~~p~GlAvD~~~---------~~lY~tD~~----------~~~I 416 (619)
T 3s94_A 359 VEGYIYWTDDE--VRAIRRSFIDGSGSQFVVTAQI-AHPDGIAVDWVA---------RNLYWTDTG----------TDRI 416 (619)
T ss_dssp TTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTT---------TEEEEEETT----------TTEE
T ss_pred CCCeEEEEeCC--CCeEEEEEcCCCccEEEEECCC-CCcCceEEeccc---------CcEEEEeCC----------CCcE
Confidence 47899997753 4678888887755544322111 111233332111 778887422 2468
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS 250 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~ 250 (373)
++.+.....-+.+..-. .......++. +|.|||........|...++....-..+ ..-... .-.+++.
T Consensus 417 ~v~~~~G~~~~~l~~~~--------l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l-~~~~l~-~P~Glal 486 (619)
T 3s94_A 417 EVTRLNGTMRKILISED--------LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVL-VNTSLG-WPNGLAL 486 (619)
T ss_dssp EEEETTSCSCEEEECTT--------CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE-ECSSCS-CEEEEEE
T ss_pred EEEeCCCCeEEEEEECC--------CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEE-EeCCCC-CCeeeEE
Confidence 88888665433332110 0011223443 5999999533357899998875443333 111111 1123444
Q ss_pred E--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEc
Q 046684 251 R--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRE 328 (373)
Q Consensus 251 ~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~ 328 (373)
- +++||++.... ..++..+++- . .. +.+.. ... ..+..++..++.||+.+.....|...|.
T Consensus 487 D~~~~~LY~aD~~~-~~I~~~~~dG--~-~~-~~~~~---~~l---------~~P~glav~~~~ly~tD~~~~~I~~~~k 549 (619)
T 3s94_A 487 DYDEGKIYWGDAKT-DKIEVMNTDG--T-GR-RVLVE---DKI---------PHIFGFTLLGDYVYWTDWQRRSIERVHK 549 (619)
T ss_dssp ETTTTEEEEEETTT-TEEEEEESSS--C-CC-EEEEE---CCC---------CSSCCEEEETTEEEEECTTSSCEEEEES
T ss_pred cccCCEEEEEECCC-CEEEEEecCC--C-ce-EEEec---cCC---------CCcEEEEEECCEEEEeecCCCeEEEEEc
Confidence 3 68999986432 2345555532 1 22 22211 001 1156677788999999988888999998
Q ss_pred cccCC
Q 046684 329 DEDKR 333 (373)
Q Consensus 329 ~~~~~ 333 (373)
. ++
T Consensus 550 ~--~g 552 (619)
T 3s94_A 550 R--SA 552 (619)
T ss_dssp S--SC
T ss_pred C--CC
Confidence 8 76
No 270
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.77 E-value=29 Score=32.64 Aligned_cols=151 Identities=9% Similarity=0.013 Sum_probs=72.7
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccceec-cCC--CCC-CCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQFRY-LPL--LNV-SRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT 167 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w~~-lp~--~~~-~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~ 167 (373)
+.+|.+++.++. ...+.+||..+++... +.. +.. .....-..+...+ +++.++.++.+
T Consensus 199 spdg~~las~s~--D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp--------dg~~l~s~s~D-------- 260 (611)
T 1nr0_A 199 NPDGSLFASTGG--DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP--------DGTKIASASAD-------- 260 (611)
T ss_dssp CTTSSEEEEEET--TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT--------TSSEEEEEETT--------
T ss_pred CCCCCEEEEEEC--CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC--------CCCEEEEEeCC--------
Confidence 335555554443 4678999988876533 211 100 1111111222221 15556666554
Q ss_pred ccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee
Q 046684 168 YESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT 247 (373)
Q Consensus 168 ~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~ 247 (373)
..+.++|..+++....-..... .......+..++...+.+ .....+..+|+.+.+-... +..+.....
T Consensus 261 --~~v~lWd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~s~-s~d~~i~~~~~~~~~~~~~---~~gh~~~v~ 328 (611)
T 1nr0_A 261 --KTIKIWNVATLKVEKTIPVGTR------IEDQQLGIIWTKQALVSI-SANGFINFVNPELGSIDQV---RYGHNKAIT 328 (611)
T ss_dssp --SEEEEEETTTTEEEEEEECCSS------GGGCEEEEEECSSCEEEE-ETTCCEEEEETTTTEEEEE---ECCCSSCEE
T ss_pred --CeEEEEeCCCCceeeeecCCCC------ccceeEEEEEcCCEEEEE-eCCCcEEEEeCCCCCcceE---EcCCCCCEE
Confidence 4689999988765432222100 001111223355444443 3456678888887653322 111222222
Q ss_pred -EEE-ECCEEEEEEeecCCceEEEEeec
Q 046684 248 -LVS-RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 248 -~~~-~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
++. -+|+..+.++. +..+.+|++..
T Consensus 329 ~l~~spdg~~l~s~s~-D~~v~~Wd~~~ 355 (611)
T 1nr0_A 329 ALSSSADGKTLFSADA-EGHINSWDIST 355 (611)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred EEEEeCCCCEEEEEeC-CCcEEEEECCC
Confidence 222 25666555544 44579999865
No 271
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=83.61 E-value=26 Score=31.89 Aligned_cols=53 Identities=8% Similarity=-0.143 Sum_probs=32.8
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCccccee
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFR 120 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~ 120 (373)
..++.||..+++......+.++.... +...+|.+|++.| ..++.||+.+++-.
T Consensus 167 ~~yw~yd~~~~~~~~~~w~gi~~iDA-A~~~~g~~YfFkG----~~y~rfd~~~~~v~ 219 (460)
T 1qhu_A 167 NRKWFWDLTTGTKKERSWPAVGNCTS-ALRWLGRYYCFQG----NQFLRFNPVSGEVP 219 (460)
T ss_dssp TEEEEEETTTTEEEEECCTTSCCCSE-EEEETTEEEEEET----TEEEEECTTTCCCC
T ss_pred ccEEEEecccceeecccCCCCCccch-heeeCCceEEEEC----CEEEEEcCccCccc
Confidence 46678998766433222222333222 3334688999988 68899999876543
No 272
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.32 E-value=21 Score=30.60 Aligned_cols=94 Identities=7% Similarity=0.108 Sum_probs=49.2
Q ss_pred CCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEE
Q 046684 179 HDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTL 257 (373)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~ 257 (373)
..+|+.+..... ........+++.++.+|++|. ...++.-+=.-++|+.+..+.+.+.....++. -++.+++
T Consensus 65 G~tW~~~~~~~~-----~~~~~~~~i~~~~~~~~~~g~--~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~ 137 (327)
T 2xbg_A 65 GQTWEPRTLVLD-----HSDYRFNSVSFQGNEGWIVGE--PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEM 137 (327)
T ss_dssp TSSCEECCCCCS-----CCCCEEEEEEEETTEEEEEEE--TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEE
T ss_pred CCCCeECCCCCC-----CCCccEEEEEecCCeEEEEEC--CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEE
Confidence 457998854210 001111233445678888752 23444422235689998432222112233433 4678887
Q ss_pred EEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 258 IGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 258 ~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
++. .+ .+|.-.+ ...+|+.+..
T Consensus 138 ~~~-~g---~v~~S~D--gG~tW~~~~~ 159 (327)
T 2xbg_A 138 ITN-VG---AIYRTKD--SGKNWQALVQ 159 (327)
T ss_dssp EET-TC---CEEEESS--TTSSEEEEEC
T ss_pred EeC-Cc---cEEEEcC--CCCCCEEeec
Confidence 763 21 4777665 5678999865
No 273
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=82.90 E-value=21 Score=30.40 Aligned_cols=140 Identities=6% Similarity=-0.061 Sum_probs=73.5
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCce-EEECCEEEEEEcCCceEEEEEECC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNES-VCTRGMLYWITSARAYSVIGFDIE 228 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~-~~~~g~ly~~gg~~~~~i~~yd~~ 228 (373)
..+|.++... ..+++||..+++.+... .+. ..... ..-+|.+++.. ...+..||++
T Consensus 61 ~~l~~~d~~~----------~~i~~~d~~~~~~~~~~-~~~---------~v~~i~~~~dg~l~v~~---~~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNILE----------RELHELHLASGRKTVHA-LPF---------MGSALAKISDSKQLIAS---DDGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGGG----------TEEEEEETTTTEEEEEE-CSS---------CEEEEEEEETTEEEEEE---TTEEEEEETT
T ss_pred CEEEEEECCC----------CEEEEEECCCCcEEEEE-CCC---------cceEEEEeCCCeEEEEE---CCCEEEEECC
Confidence 5677765332 46889999887655432 211 00111 23468877763 3469999999
Q ss_pred CCcEEecccCCCCCC--Cce-eE-EEECCEEEEEEeecC---CceEEEEeecCCCCCCeEEEEe-echhhhhhhcCCCCC
Q 046684 229 SNTWRELSAPMADRL--EFA-TL-VSRNQKLTLIGGTCG---GDACVWELSEGGDDDIWCLIEK-VPIEMGMRLSGGKAS 300 (373)
Q Consensus 229 ~~~w~~~~~~~p~~~--~~~-~~-~~~~g~l~~~gg~~~---~~~~i~~~~~~~~~~~W~~v~~-~p~~~~~~~~~~~~~ 300 (373)
+++...+ ...+... ... .+ +.-+|++|+...... ....+|.++. .+...+.. .....
T Consensus 118 ~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~----g~~~~~~~~~~~~~---------- 182 (326)
T 2ghs_A 118 TGVLTLH-AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAK----GKVTKLFADISIPN---------- 182 (326)
T ss_dssp TCCEEEE-ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEET----TEEEEEEEEESSEE----------
T ss_pred CCcEEEE-eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeC----CcEEEeeCCCcccC----------
Confidence 9988766 3322211 111 22 223678877543211 1246777753 44443321 11100
Q ss_pred CCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 301 WGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 301 ~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.......+..+|+.+.....+++||.+
T Consensus 183 --~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 183 --SICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp --EEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred --CeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 112222345688877666678888863
No 274
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=82.46 E-value=30 Score=34.60 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=19.0
Q ss_pred cCCEEEEEEcCCccEEEEEccccCC
Q 046684 309 GNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.++..++.++.++.+.+||.+ ++
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~--~g 243 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDAN--SG 243 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETT--TC
T ss_pred CCCCEEEEEECCCeEEEEECC--CC
Confidence 367778888888889999998 77
No 275
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.09 E-value=23 Score=30.25 Aligned_cols=21 Identities=5% Similarity=-0.170 Sum_probs=16.0
Q ss_pred cCCEEEEEEcCCccEEEEEcc
Q 046684 309 GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.++..++.++..+.+.+||.+
T Consensus 319 p~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SSSCCEEEEETTSEEEEEEEE
T ss_pred CCCCeEEEecCCceEEEEEEE
Confidence 356666777777789999987
No 276
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=82.00 E-value=16 Score=32.43 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=37.3
Q ss_pred CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEec-CC-EEEEEEcCCccEEEEEcc
Q 046684 252 NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAG-NG-AICLYREVGLGMIIWRED 329 (373)
Q Consensus 252 ~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~i~~~~~~~~~~~~yd~~ 329 (373)
++++++.+ .+..+.+|+++. .......+...+... ..... ....+... ++ .+++.++..+.+.+||++
T Consensus 188 ~~~~l~s~--~d~~i~iwd~~~--~~~~~~~~~~~~~~~-~~~~~-----~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 188 DYETYLSA--DDLRINLWHLEI--TDRSFNIVDIKPANM-EELTE-----VITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp TSSEEEEE--CSSEEEEEETTE--EEEEEEEEECCCSSG-GGCCC-----CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCEEEEe--CCCeEEEEECCC--CCceeeeeecccccc-cccCc-----ceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 56666654 455689999863 112233222112111 11000 01222222 34 788888888889999999
Q ss_pred ccCC
Q 046684 330 EDKR 333 (373)
Q Consensus 330 ~~~~ 333 (373)
++
T Consensus 258 --~~ 259 (447)
T 3dw8_B 258 --AS 259 (447)
T ss_dssp --TC
T ss_pred --CC
Confidence 77
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=81.51 E-value=0.41 Score=42.45 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=32.4
Q ss_pred eEEECCEEEEEEcCCceEEEEEECCCC--cEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 204 SVCTRGMLYWITSARAYSVIGFDIESN--TWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 204 ~~~~~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
.++.++.+|+.+ ....+.++|.+++ .|+.- . . . .....+..+|.+++.+. .+..+..|+.++ .+..|+
T Consensus 5 P~v~~~~v~~gs--~dg~v~a~d~~tG~~~W~~~-~--~-~-~~s~p~~~~g~~~v~~s-~dg~l~a~d~~t--G~~~w~ 74 (369)
T 2hz6_A 5 VTLPETLLFVST--LDGSLHAVSKRTGSIKWTLK-E--D-P-VLQVPTHVEEPAFLPDP-NDGSLYTLGSKN--NEGLTK 74 (369)
T ss_dssp ---CTTEEEEEE--TTSEEEEEETTTCCEEEEEE-C--C-C-SCCCC-----CCEEECT-TTCCEEEC-------CCSEE
T ss_pred CeeeCCEEEEEc--CCCEEEEEECCCCCEEEEec-C--C-C-ceecceEcCCCEEEEeC-CCCEEEEEECCC--Cceeee
Confidence 355678888764 3468999998876 47654 2 1 1 11122334666776643 223356666654 334565
Q ss_pred E
Q 046684 282 L 282 (373)
Q Consensus 282 ~ 282 (373)
.
T Consensus 75 ~ 75 (369)
T 2hz6_A 75 L 75 (369)
T ss_dssp C
T ss_pred e
Confidence 4
No 278
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=81.02 E-value=0.65 Score=26.53 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=13.5
Q ss_pred CCcchHHHHHHHHhcC
Q 046684 2 WSNLHLDVLANIFSFL 17 (373)
Q Consensus 2 ~~~Lp~dll~~Il~rL 17 (373)
++.||.|+.+|||+--
T Consensus 21 F~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 21 FKQLPADIQEEILSGK 36 (48)
T ss_dssp TTTSCHHHHHHHTTCC
T ss_pred HHHCcHHHHHHHHhcc
Confidence 6789999999999843
No 279
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=80.20 E-value=19 Score=32.64 Aligned_cols=118 Identities=9% Similarity=0.033 Sum_probs=64.1
Q ss_pred CCEEEEEE-----cCCceEEEEEECCCCcEEecccCCCC--CCCceeE-EEECCEEEEEEe------------------e
Q 046684 208 RGMLYWIT-----SARAYSVIGFDIESNTWRELSAPMAD--RLEFATL-VSRNQKLTLIGG------------------T 261 (373)
Q Consensus 208 ~g~ly~~g-----g~~~~~i~~yd~~~~~w~~~~~~~p~--~~~~~~~-~~~~g~l~~~gg------------------~ 261 (373)
+| +|+-. |...+.+..+|.++.+-... .+.+. ....+.+ ..-+++.++... .
T Consensus 148 dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~-~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 148 DA-IYISALGNEEGEGPGGILMLDHYSFEPLGK-WEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEE-CCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEE-EccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 46 77754 23357899999997764433 22221 1112222 233555555442 1
Q ss_pred cCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEE--EecCCEEEEEEc-----CCccEEEEEccccCCc
Q 046684 262 CGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRC--AAGNGAICLYRE-----VGLGMIIWREDEDKRK 334 (373)
Q Consensus 262 ~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~-----~~~~~~~yd~~~~~~~ 334 (373)
.+..+.+|+++. . +.+..++.+.-.. . .+...+ ...+...|+... .++.+++|..+ .+
T Consensus 226 ~~d~V~v~D~~~----~--k~~~tI~vg~~g~-~-----P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d--~g- 290 (462)
T 2ece_A 226 YGNRIHFWDLRK----R--KRIHSLTLGEENR-M-----ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE--DG- 290 (462)
T ss_dssp SCCEEEEEETTT----T--EEEEEEESCTTEE-E-----EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE--TT-
T ss_pred cCCEEEEEECCC----C--cEeeEEecCCCCC-c-----cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec--CC-
Confidence 133488888854 3 5666665531100 0 001112 223668888887 77889888888 77
Q ss_pred ccEEEeccc
Q 046684 335 WEWVWVGGC 343 (373)
Q Consensus 335 ~~W~~~~~~ 343 (373)
+|+.+...
T Consensus 291 -~~~~~~vI 298 (462)
T 2ece_A 291 -KWNAEKVI 298 (462)
T ss_dssp -EEEEEEEE
T ss_pred -ceeEEEEE
Confidence 78776643
No 280
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=79.48 E-value=30 Score=29.90 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=23.5
Q ss_pred cCCEEEEEEcCCccEEEEEccccCCcccEEEecccccCCC
Q 046684 309 GNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCCLTGG 348 (373)
Q Consensus 309 ~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~~~~~ 348 (373)
.|+.|++.+...+.+.+|+.+ .+ .-+.+...+.+..
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~--~~--~l~~~~~~~~~~p 355 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWK--DE--FLHRVARVRIPEP 355 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEE--TT--EEEEEEEEECCST
T ss_pred CCCEEEEEEcCCCeEEEEEEc--hh--hCceeeEEEcCCC
Confidence 477888877666789999998 66 4444443444433
No 281
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.23 E-value=67 Score=33.20 Aligned_cols=161 Identities=9% Similarity=0.012 Sum_probs=75.1
Q ss_pred eEEEEEcCcccceeccCCCC--CCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceee
Q 046684 107 LQLVLCNPFTRQFRYLPLLN--VSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQI 184 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~--~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~ 184 (373)
..+.+.||.| |..+.... ......+++.+.-.... ...+++|-....+.+.......+.+|+...++.+.
T Consensus 807 s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~------~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~l 878 (1158)
T 3ei3_A 807 HNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDP------NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQT 878 (1158)
T ss_dssp EEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCC------CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEE
T ss_pred EEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCC------CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEE
Confidence 3577889876 44433222 22222222322221111 34666664221111122234568888876666665
Q ss_pred ecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEeccc-CCCCCCCceeEEEECCEEEEEEeecC
Q 046684 185 IGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSA-PMADRLEFATLVSRNQKLTLIGGTCG 263 (373)
Q Consensus 185 ~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~-~~p~~~~~~~~~~~~g~l~~~gg~~~ 263 (373)
+...+. .-...+.+.++|++.+.- ...+..||...++--.... ..+. .....+.+.++.|++..-..
T Consensus 879 v~~~~v-------~g~v~al~~~~g~Lla~i---g~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~vgD~~~- 946 (1158)
T 3ei3_A 879 VAEKEV-------KGAVYSMVEFNGKLLASI---NSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMR- 946 (1158)
T ss_dssp EEEEEE-------SSCEEEEEEETTEEEEEE---TTEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEEEESSB-
T ss_pred EEEEEc-------CCcCEEEeeeCCEEEEEc---CCEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEEEEhhh-
Confidence 554321 111234456788665543 3578889887654222100 0111 11113445566655543332
Q ss_pred CceEEEEeecCCCCCCeEEEEeechhh
Q 046684 264 GDACVWELSEGGDDDIWCLIEKVPIEM 290 (373)
Q Consensus 264 ~~~~i~~~~~~~~~~~W~~v~~~p~~~ 290 (373)
.+.+..++. +.++-..+..-..++
T Consensus 947 -Sv~~~~y~~--~~~~L~~~a~D~~~~ 970 (1158)
T 3ei3_A 947 -SVLLLAYKP--MEGNFEEIARDFNPN 970 (1158)
T ss_dssp -CEEEEEEET--TTTEEEEEEECCSCB
T ss_pred -eEEEEEEEc--CCCeEEEEEeecccc
Confidence 345555554 446677766544433
No 282
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=78.20 E-value=24 Score=28.10 Aligned_cols=111 Identities=12% Similarity=0.065 Sum_probs=59.4
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccce---eccCC--CCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcc
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQF---RYLPL--LNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATY 168 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w---~~lp~--~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~ 168 (373)
+|.+|++-| +.+++++..+-.- +.|.. +|......-+++... .+ +++|.+-|.
T Consensus 79 ~~~iyfFkG----~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~---~~-----gk~yfFkG~---------- 136 (207)
T 1pex_A 79 HDLIFIFRG----RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFE---DT-----GKTLLFSGN---------- 136 (207)
T ss_dssp TTEEEEEET----TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECT---TT-----SEEEEEETT----------
T ss_pred CCcEEEEcc----CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeC---CC-----CEEEEEeCC----------
Confidence 689999987 6788887542211 11221 111111223333321 12 889998764
Q ss_pred cceEEEEECCCCceeeecCCCcccc--ccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEE
Q 046684 169 ESMVEMYDSRHDAWQIIGSMPVEFA--VRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWR 233 (373)
Q Consensus 169 ~~~~~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~ 233 (373)
..+.||..+++ .-...|.... .+..+..-.++...+|.+|++-| ...+.||..+++-.
T Consensus 137 --~ywr~d~~~~~--~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg---~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 137 --QVWRYDDTNHI--MDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNG---PIQFEYSIWSNRIV 196 (207)
T ss_dssp --EEEEEETTTTE--ECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEET---TEEEEEETTTTEEE
T ss_pred --EEEEEeCcCcc--ccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEEC---CEEEEEeCCccEEe
Confidence 37899886643 2222222110 00111122344456899999953 57889998876544
No 283
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=75.46 E-value=33 Score=28.31 Aligned_cols=112 Identities=11% Similarity=0.189 Sum_probs=62.0
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVP 287 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p 287 (373)
++.||++. .....|+.+|+..+.++.+ ++.......+++..++..|++.......+.++.++. .+.-|. +....
T Consensus 38 ~~~L~aV~-d~~~~I~~ld~~g~v~~~i--~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~--~~~i~~-~~~~~ 111 (255)
T 3qqz_A 38 SNTLFSTI-NKPAAIVEMTTNGDLIRTI--PLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP--NSEVKI-LKKIK 111 (255)
T ss_dssp TTEEEEEE-ETTEEEEEEETTCCEEEEE--ECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT--TCCEEE-EEEEE
T ss_pred CCEEEEEE-CCCCeEEEEeCCCCEEEEE--ecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC--CCeeee-eeeec
Confidence 47899885 3478899999997777766 443334445666665544555433333456666655 222242 22222
Q ss_pred hhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCc-cEEEEE
Q 046684 288 IEMGMRLSGGKASWGGTRCAAGNGAICLYREVGL-GMIIWR 327 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~yd 327 (373)
.+.. . ...-.+..+.+....++.+|+...... .++.|+
T Consensus 112 ~~~~-~-~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 112 IPLQ-E-SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CCCS-S-CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred cccc-c-ccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 1110 0 011112334555556789999887665 677777
No 284
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=74.88 E-value=15 Score=29.80 Aligned_cols=109 Identities=6% Similarity=0.034 Sum_probs=58.6
Q ss_pred eeCcEEEEeeCCCCceEEEEEc--Cc-------------ccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEe
Q 046684 92 SIGSFLLLRPINSTILQLVLCN--PF-------------TRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAG 156 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~n--p~-------------t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~g 156 (373)
..+|.+|++-| +.+++++ +. +..|..||....+ ...-+++... .+ +++|++-
T Consensus 70 ~~~g~~~fFKg----~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~---~~-----~k~yfFk 136 (227)
T 3lp9_A 70 TENNEAFIFYE----NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRST---RG-----KEVYLFK 136 (227)
T ss_dssp CSTTEEEEEET----TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECS---ST-----TEEEEEE
T ss_pred CCCCEEEEEeC----CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEEC---CC-----CEEEEEE
Confidence 56899999987 6788887 32 2224334321001 1222333321 12 8999997
Q ss_pred ccCCCCCCCCcccceEEEEECCCCceeeecCCCcccc--cccee----ccCCceEEE---CCEEEEEEcCCceEEEEEEC
Q 046684 157 GMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFA--VRLTV----WTPNESVCT---RGMLYWITSARAYSVIGFDI 227 (373)
Q Consensus 157 g~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~--~~~~~----~~~~~~~~~---~g~ly~~gg~~~~~i~~yd~ 227 (373)
|. ..++||..+++ .....|.... .|... .....+|+. +|++|++-| ..-+.||.
T Consensus 137 G~------------~yw~~d~~~~~--~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg---~~Ywr~d~ 199 (227)
T 3lp9_A 137 GD------------QYARIDYGSNS--MVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD---DHYARVKV 199 (227)
T ss_dssp TT------------EEEEEETTTTE--ESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET---TEEEEEEC
T ss_pred CC------------EEEEEeCCCcc--ccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC---CEEEEEEC
Confidence 65 37999986553 2222332211 11100 022333443 589999954 57889998
Q ss_pred CCC
Q 046684 228 ESN 230 (373)
Q Consensus 228 ~~~ 230 (373)
.++
T Consensus 200 ~~~ 202 (227)
T 3lp9_A 200 TPX 202 (227)
T ss_dssp CSS
T ss_pred Ccc
Confidence 776
No 285
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=74.41 E-value=37 Score=28.38 Aligned_cols=108 Identities=10% Similarity=0.078 Sum_probs=57.5
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCC---CCceeEEEECCEEEEEE---eec-----------CCceEEEE
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADR---LEFATLVSRNQKLTLIG---GTC-----------GGDACVWE 270 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~---~~~~~~~~~~g~l~~~g---g~~-----------~~~~~i~~ 270 (373)
+|.+|+.. .....|..||++ ++.+.+....... ......+.-+|.||+.. |.. .....+|.
T Consensus 96 dG~l~v~~-~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 96 QQRLVHCE-HGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp TSCEEEEE-TTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred CCCEEEEE-CCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 58888763 344689999987 6666552111111 11112233478888852 111 01135777
Q ss_pred eecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCC-----ccEEEEEccccCC
Q 046684 271 LSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVG-----LGMIIWREDEDKR 333 (373)
Q Consensus 271 ~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~yd~~~~~~ 333 (373)
++. ++.+.+.+..+..+. .......+..||+..... ..+++||.+ .+
T Consensus 174 ~d~--~~g~~~~~~~~~~p~------------gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~--~~ 225 (305)
T 3dr2_A 174 LPP--DGSPLQRMADLDHPN------------GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR--DG 225 (305)
T ss_dssp ECS--SSCCCEEEEEESSEE------------EEEECTTSSEEEEEECCC---CCCEEEEEEEE--TT
T ss_pred EcC--CCCcEEEEecCCCCc------------ceEEcCCCCEEEEEecCCcCCCCCEEEEEEec--CC
Confidence 765 456676654111110 122222345688876542 579999987 65
No 286
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=73.54 E-value=32 Score=32.43 Aligned_cols=215 Identities=8% Similarity=0.025 Sum_probs=102.1
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCC----CCC---CCC
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSD----EPR---GGA 166 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~----~~~---~~~ 166 (373)
+..+|+.... ...+.+.|+.|.+-.++-.+|.....+.+++...+.+ ..+|+-+.... ++. ...
T Consensus 101 G~~lfVnd~~--~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-------~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 101 GRFLFMNDKA--NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-------NYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEETT--TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-------SEEEEEECSCEESSCSSSSTTCGG
T ss_pred CCEEEEEcCC--CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-------cEEEEecccccccCCCCccccccc
Confidence 5567775543 5689999999988655334554444445444321211 56777653210 000 113
Q ss_pred cccceEEEEECCCCc--eeeec-CCCccccccceeccCCceEEE-C---------------CEEEEEE----------cC
Q 046684 167 TYESMVEMYDSRHDA--WQIIG-SMPVEFAVRLTVWTPNESVCT-R---------------GMLYWIT----------SA 217 (373)
Q Consensus 167 ~~~~~~~~yd~~~~~--W~~~~-~~p~~~~~~~~~~~~~~~~~~-~---------------g~ly~~g----------g~ 217 (373)
.....+-+.|.++.+ |+... .-|........ .....+.. + +.+.++. |.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spd--Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYE--GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESSCCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccCceEEEEECCCCeEEEEEEeCCCccceEECCC--CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 445678889988765 65442 22221110000 00000000 1 0111111 00
Q ss_pred --CceEEEEEECCCCcEEecccCCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCC--CCC----CeEEEEeech
Q 046684 218 --RAYSVIGFDIESNTWRELSAPMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGG--DDD----IWCLIEKVPI 288 (373)
Q Consensus 218 --~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~--~~~----~W~~v~~~p~ 288 (373)
..+.+-+.|.++.+.+.+-...|....-+++.. -+|+..++.+.....+.+++++... ..+ .=..+..++.
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 013477778877322220011222223334433 3677666665555557888886410 000 0012333332
Q ss_pred hhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 289 EMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.... .+..+..++.+|+....++.+.++|.+
T Consensus 330 G~gP----------~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 330 GLGP----------LHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CSCE----------EEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred CCCc----------ceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 2211 133333455999999888899999998
No 287
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=73.05 E-value=35 Score=27.53 Aligned_cols=58 Identities=7% Similarity=0.025 Sum_probs=34.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEe----cccCCCCC-----CCceeEE-E--ECCEEEEEEeecCCceEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRE----LSAPMADR-----LEFATLV-S--RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~----~~~~~p~~-----~~~~~~~-~--~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+|++|++-| ...+.||..+++... +....|.- ......+ . .+|++|++.|. ..|.++.
T Consensus 127 ~gk~yfFkG---~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-----~ywr~d~ 196 (225)
T 3oyo_A 127 GKEVYLFKG---NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-----NYVRIDF 196 (225)
T ss_dssp TTEEEEEET---TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-----EEEEEEC
T ss_pred CCcEEEEeC---CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-----EEEEEeC
Confidence 689999954 478899977665442 10011211 1122233 3 37899999873 5888876
No 288
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=71.78 E-value=81 Score=31.45 Aligned_cols=114 Identities=12% Similarity=0.039 Sum_probs=55.2
Q ss_pred EEECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEE
Q 046684 205 VCTRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 205 ~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~ 282 (373)
++..|. |++.+...+.|..+|+.+++-... ...+ .....+.. ++..+++|+ .+..+.+|+++. ..-..
T Consensus 65 ~fspg~-~L~S~s~D~~v~lWd~~~~~~~~~-~~~~---~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~----~~~~~ 134 (902)
T 2oaj_A 65 RFVKGI-YLVVINAKDTVYVLSLYSQKVLTT-VFVP---GKITSIDTDASLDWMLIGL-QNGSMIVYDIDR----DQLSS 134 (902)
T ss_dssp EEETTT-EEEEEETTCEEEEEETTTCSEEEE-EECS---SCEEEEECCTTCSEEEEEE-TTSCEEEEETTT----TEEEE
T ss_pred EEcCCC-EEEEEECcCeEEEEECCCCcEEEE-EcCC---CCEEEEEECCCCCEEEEEc-CCCcEEEEECCC----Ccccc
Confidence 334466 344344567899999988754322 1111 11222222 455555554 445589999865 32221
Q ss_pred EEeechhhhh-hhcCCCCCCCceEEEec--CCEEEEEEcCCccEEEEEccccCC
Q 046684 283 IEKVPIEMGM-RLSGGKASWGGTRCAAG--NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 283 v~~~p~~~~~-~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
..++..... ....+.... ...+... ++.+++.+...+.+ +||++ ++
T Consensus 135 -~~i~~~~~~~~~~~~h~~~-V~sl~~sp~~~~~l~~g~~dg~v-lWd~~--~~ 183 (902)
T 2oaj_A 135 -FKLDNLQKSSFFPAARLSP-IVSIQWNPRDIGTVLISYEYVTL-TYSLV--EN 183 (902)
T ss_dssp -EEECCHHHHHTCSSSCCCC-CCEEEEETTEEEEEEEECSSCEE-EEETT--TT
T ss_pred -ceeccccccccccccCCCC-eEEEEEccCCCCEEEEEeCCCcE-EEECC--CC
Confidence 112110000 000011111 1222222 34677777777778 99999 77
No 289
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.59 E-value=10 Score=33.01 Aligned_cols=117 Identities=7% Similarity=-0.024 Sum_probs=59.0
Q ss_pred ECCEEEEEEcCCceEEEEEECCCC--cEEecccC---CCCCCCceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeE
Q 046684 207 TRGMLYWITSARAYSVIGFDIESN--TWRELSAP---MADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWC 281 (373)
Q Consensus 207 ~~g~ly~~gg~~~~~i~~yd~~~~--~w~~~~~~---~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~ 281 (373)
.+|.+|+.. ....++++|.+++ .|+.- .. ++....... ...++.++++....+. .+|-++. ++..|.
T Consensus 9 ~~~~V~v~t--~dG~l~Ald~~tG~~~W~~~-~~~~~p~~~~~~~~-~~~~~~~~vv~p~~dG--~l~a~~~--~~G~~~ 80 (339)
T 2be1_A 9 LSDILIAAD--VEGGLHAVDRRNGHIIWSIE-PENFQPLIEIQEPS-RLETYETLIIEPFGDG--NIYYFNA--HQGLQK 80 (339)
T ss_dssp EEEEEEEEE--TTSCEEEEETTTTEEEEEEC-GGGSCCSEECCCSC-TTTSSEEEEECCSTTT--EEEEEET--TTEEEE
T ss_pred eCCEEEEEe--CCCeEEEEECCCCcEEEEec-CCccCCcEEecCCc-cccCCcEEEEEECCCC--EEEEEEC--CCCcEE
Confidence 556677653 4677888888776 58754 22 111100000 0024455555422222 3455544 334554
Q ss_pred EEEeechhhhhhhcCCCCCCCceEE----Ee-------cCCEEEEEEcCCccEEEEEccccCCcccEEEeccc
Q 046684 282 LIEKVPIEMGMRLSGGKASWGGTRC----AA-------GNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGC 343 (373)
Q Consensus 282 ~v~~~p~~~~~~~~~~~~~~~~~~~----~~-------~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~ 343 (373)
.-..++..... .+... +. .++.+|+ |...+.++..|.+ +++..|+.-...
T Consensus 81 ~~~~~~~lv~~---------SP~~~~~~pvv~~~~~~~~~g~Vy~-Gs~~g~l~ald~~--tG~~~W~~~~~~ 141 (339)
T 2be1_A 81 LPLSIRQLVST---------SPLHLKTNIVVNDSGKIVEDEKVYT-GSMRTIMYTINML--NGEIISAFGPGS 141 (339)
T ss_dssp EEEEHHHHHTT---------CSEEEECC----------CCEEEEE-CEEEEEEEEEETT--TCCEEEEESTTC
T ss_pred eeeccccceec---------cccccCCCceeecccccccCCEEEE-EecCCEEEEEECC--CCcEEEEEecCC
Confidence 43344432211 01111 11 4555554 6666789999999 998788865443
No 290
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=71.35 E-value=37 Score=30.53 Aligned_cols=113 Identities=9% Similarity=-0.029 Sum_probs=59.0
Q ss_pred CCEEEEEEcCC---ceEEEEEECCCCcEEecccCCCCCCCceeEEEE-C-CEEEEEEee--------cCCceEEEEeecC
Q 046684 208 RGMLYWITSAR---AYSVIGFDIESNTWRELSAPMADRLEFATLVSR-N-QKLTLIGGT--------CGGDACVWELSEG 274 (373)
Q Consensus 208 ~g~ly~~gg~~---~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~-g~l~~~gg~--------~~~~~~i~~~~~~ 274 (373)
...+|+..... .+.|.++|+++++-... .+... .- +++.. + ..||+.... ....+.+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~-I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~--- 156 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGM-TDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP--- 156 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEE-EEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEE-EECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC---
Confidence 35678775321 17899999998865433 23222 22 34333 3 457777531 1122444444
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-CccEEEEEccccCC
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-GLGMIIWREDEDKR 333 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~yd~~~~~~ 333 (373)
.+-+.+..++.+.-.++..+ .......+...+..+|+.+.. .+.+.++|++ ++
T Consensus 157 ---~t~~vv~~I~v~g~~r~~~g-~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~--t~ 210 (426)
T 3c75_H 157 ---VTFLPIADIELPDAPRFLVG-TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE--GK 210 (426)
T ss_dssp ---TTCCEEEEEEETTCCCCCBS-CCGGGSEECTTSSEEEEEECSSSCEEEEEETT--TT
T ss_pred ---CCCcEEEEEECCCccccccC-CCcceEEEcCCCCEEEEEecCCCCeEEEEECC--CC
Confidence 33445555543200000000 000134555567789998754 5679999999 77
No 291
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=70.81 E-value=25 Score=31.15 Aligned_cols=113 Identities=9% Similarity=-0.040 Sum_probs=59.7
Q ss_pred CCEEEEEEcC---CceEEEEEECCCCcEEecccCCCCCCCceeEEEE-CC-EEEEEEee--------cCCceEEEEeecC
Q 046684 208 RGMLYWITSA---RAYSVIGFDIESNTWRELSAPMADRLEFATLVSR-NQ-KLTLIGGT--------CGGDACVWELSEG 274 (373)
Q Consensus 208 ~g~ly~~gg~---~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~g-~l~~~gg~--------~~~~~~i~~~~~~ 274 (373)
.+.+|+.... ..+.+.++|+.+.+-... .+ ....- +++.. +| .||+.... ....+.+|+...
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~-I~--vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t- 118 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGM-ID--GGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT- 118 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEE-EE--ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEE-EE--CCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC-
Confidence 4678887422 147899999998765432 22 22222 23333 44 57877632 112256666533
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcC-CccEEEEEccccCC
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREV-GLGMIIWREDEDKR 333 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~yd~~~~~~ 333 (373)
-+.+..++.+...+...+ .......+...|..+|+.+.. .+.+.+.|.+ ++
T Consensus 119 -----~~v~~~I~v~~g~r~~~g-~~P~~~a~spDGk~lyVan~~~~~~VsVID~~--t~ 170 (386)
T 3sjl_D 119 -----LLPTADIELPDAPRFLVG-TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE--GK 170 (386)
T ss_dssp -----CCEEEEEEETTCCCCCBS-CCGGGEEECTTSSEEEEEECSSSCEEEEEETT--TT
T ss_pred -----CeEEEEEECCCccccccC-CCCceEEEcCCCCEEEEEEcCCCCeEEEEECC--CC
Confidence 345555443210000000 000134455567789998753 5679999999 77
No 292
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=69.88 E-value=56 Score=28.53 Aligned_cols=99 Identities=10% Similarity=0.041 Sum_probs=51.2
Q ss_pred EEEEEECCCCcEEecccCCCCCCCceeEEEE-C-CEEEEEEee--------cCCceEEEEeecCCCCCCeEEEEeechhh
Q 046684 221 SVIGFDIESNTWRELSAPMADRLEFATLVSR-N-QKLTLIGGT--------CGGDACVWELSEGGDDDIWCLIEKVPIEM 290 (373)
Q Consensus 221 ~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~-~-g~l~~~gg~--------~~~~~~i~~~~~~~~~~~W~~v~~~p~~~ 290 (373)
.+..||+.+++-.. ..+..... +++.. + ..||+.... ....+.+++.+ +.+.+..++.+.
T Consensus 48 ~v~v~D~~t~~~~~---~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~------t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSGSILG---HVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV------TFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCCeEEE---EecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC------CCcEEEEEECCC
Confidence 78899998876432 22332222 44333 3 467777531 12225566553 344555544320
Q ss_pred hhhhcCCCCCCCceEEEecCCEEEEEEcC-CccEEEEEccccCC
Q 046684 291 GMRLSGGKASWGGTRCAAGNGAICLYREV-GLGMIIWREDEDKR 333 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~yd~~~~~~ 333 (373)
-.+...+ .......+...|..||+.+.. .+.+.++| + ++
T Consensus 118 ~~~~~~g-~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~--t~ 157 (373)
T 2mad_H 118 APRFDVG-PYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q--GG 157 (373)
T ss_pred ccccccC-CCccceEECCCCCEEEEEecCCCCeEEEEE-C--CC
Confidence 0000000 011134445567889988754 56799999 9 87
No 293
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=69.01 E-value=1e+02 Score=31.20 Aligned_cols=90 Identities=7% Similarity=-0.014 Sum_probs=45.3
Q ss_pred eEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEE-EEECCCCcEEecccCCCCCCCceeEE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVI-GFDIESNTWRELSAPMADRLEFATLV 249 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~-~yd~~~~~w~~~~~~~p~~~~~~~~~ 249 (373)
.+++++..++.-+.+...+. .... ..... +|...+.+.. ...++ .+|..+++...+ . ........++
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~------~~~~-~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l-~--~~~~~~~~~~ 385 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLR------IRYV-RRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKF-E--ENLGNVFAMG 385 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSC------EEEE-EECSS-SEEEEEEEET-TEEEEEEEETTTCCEEEC-C--CCCCSEEEEE
T ss_pred EEEEEcCCCCceEEccCCCc------ceEE-eeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEe-c--CCccceeeeE
Confidence 57788877766554433211 0000 01112 5543333333 56788 899998877666 2 2211112222
Q ss_pred E-ECCEEEEEEeecCCceEEEEeec
Q 046684 250 S-RNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 250 ~-~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
. -+|+.++++. ....+.+|+++.
T Consensus 386 ~SpDG~~la~~~-~~~~v~~~d~~t 409 (1045)
T 1k32_A 386 VDRNGKFAVVAN-DRFEIMTVDLET 409 (1045)
T ss_dssp ECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred ECCCCCEEEEEC-CCCeEEEEECCC
Confidence 2 2666555543 333467887754
No 294
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=66.97 E-value=49 Score=26.70 Aligned_cols=107 Identities=7% Similarity=-0.039 Sum_probs=56.4
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccc--eec----------cCCCCC--CCCCCeEEEEEcCCCCCCCCCceEEEEEecc
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQ--FRY----------LPLLNV--SRTNPAVGIVMEGPAQHGPFPNFRIYVAGGM 158 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~--w~~----------lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~ 158 (373)
.+|.+|++-| +.++++|-.+++ ... .|.+|. .....-+++... .+ +++|.+-|.
T Consensus 69 ~~g~~~fFkg----~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~---~~-----gk~yfFkG~ 136 (225)
T 3oyo_A 69 EASEAYVFSG----NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRST---KG-----KEVYLFKGN 136 (225)
T ss_dssp STTEEEEEET----TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECS---ST-----TEEEEEETT
T ss_pred CCCeEEEEcC----CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEEC---CC-----CcEEEEeCC
Confidence 6899999987 678888543221 111 122222 111222333221 12 899999765
Q ss_pred CCCCCCCCcccceEEEEECCCCceeeecCCCcccc--ccce----eccCCceEEE---CCEEEEEEcCCceEEEEEECCC
Q 046684 159 SDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFA--VRLT----VWTPNESVCT---RGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 159 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~--~~~~----~~~~~~~~~~---~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
. .++||..+++-..- |.... .+.. ......+|+. +|++|++-| ...+.||..+
T Consensus 137 ~------------yw~~d~~~~~~~~g---Pk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---~~ywr~d~~~ 198 (225)
T 3oyo_A 137 K------------YVRIAYDSKQLVGN---IRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---QNYVRIDFTP 198 (225)
T ss_dssp E------------EEEEETTTTEEEEE---EEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET---TEEEEEECCT
T ss_pred e------------EEEEECCCCeecCC---CcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC---CEEEEEeCCc
Confidence 3 78898766554331 11100 0011 0112333444 799999954 5788999883
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=66.87 E-value=79 Score=29.06 Aligned_cols=214 Identities=10% Similarity=-0.031 Sum_probs=101.7
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCCC-CCeEEEEEcCCCCCCCCCc-eEEEEEeccCCCCCCCC-cccc
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSRT-NPAVGIVMEGPAQHGPFPN-FRIYVAGGMSDEPRGGA-TYES 170 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~~-~~~~~~~~~~~~~~~~~~~-~kl~~~gg~~~~~~~~~-~~~~ 170 (373)
++.||+.... ...+.+.|+.+++.+.+........ .+..... ...-.+++.+ ..+|+..... .. ....
T Consensus 151 ~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~--~~~~~~~d~~G~~lyvad~~~-----~~~~~~~ 221 (496)
T 3kya_A 151 KDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAF--NKKIEGYADEAEYMIVAIDYD-----GKGDESP 221 (496)
T ss_dssp EEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEE--CCCBTTTBCTTCEEEEEECCC-----TTGGGEE
T ss_pred CCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEE--eecccccCCCCCEEEEEeCCC-----CCcccCc
Confidence 5778887653 4678999999998877644332111 1221222 0000001111 4588765322 11 2234
Q ss_pred eEEEEECCC-Cceeee---cCCCccccccceeccCCceEEE--CCEEEEEEcCCceEEEEEECC-------CCc-EEecc
Q 046684 171 MVEMYDSRH-DAWQII---GSMPVEFAVRLTVWTPNESVCT--RGMLYWITSARAYSVIGFDIE-------SNT-WRELS 236 (373)
Q Consensus 171 ~~~~yd~~~-~~W~~~---~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~~~~~i~~yd~~-------~~~-w~~~~ 236 (373)
.+.+++... +.|... ..++ .......++.. ++.||+.. .....|+.||++ +++ |+...
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~-------~~~~p~giavdp~~g~LYvtd-~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIA-------AYKQCNGATIHPINGELYFNS-YEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEE-------EESCCCCEEECTTTCCEEEEE-TTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred eEEEEecCCCCceeecccceeec-------cCCCceEEEEcCCCCeEEEEE-CCCCEEEEEecccccccccCceeecccc
Confidence 577787544 456320 1111 11122333333 47899884 456779999997 444 33220
Q ss_pred ----------cCCCCCCCceeEEEE-CCE-EEEEEeecCCceEEEEeecCCCCCCe---EEEEeechhhhhhhcCCC---
Q 046684 237 ----------APMADRLEFATLVSR-NQK-LTLIGGTCGGDACVWELSEGGDDDIW---CLIEKVPIEMGMRLSGGK--- 298 (373)
Q Consensus 237 ----------~~~p~~~~~~~~~~~-~g~-l~~~gg~~~~~~~i~~~~~~~~~~~W---~~v~~~p~~~~~~~~~~~--- 298 (373)
...+......+++.. +|. ||+... ..+ .|+.++..+.+... +.+...+.... +.++.
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h-~I~kid~dg~~~~~~~~~~~aG~~g~~G--~~DG~~~~ 368 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNH-YFMRSDYDEIKKEFITPYNFVGGYKQSG--YRDDVGTE 368 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTT-EEEEEEEETTTTEECCCEEEEEBTTBCC--CBCCBGGG
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCC-EEEEEecCCCcceecccEEecCCCCCCc--ccCCcccc
Confidence 111211122344443 455 788753 222 45553321133322 22322211000 00000
Q ss_pred -CCCCce-EEEe--------cCCEEEEEEcCCccEEEEEcc
Q 046684 299 -ASWGGT-RCAA--------GNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 299 -~~~~~~-~~~~--------~~~~i~~~~~~~~~~~~yd~~ 329 (373)
....+. .++. .++.||+.+.....|..++++
T Consensus 369 a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~ 409 (496)
T 3kya_A 369 ARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE 409 (496)
T ss_dssp CBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT
T ss_pred cccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCC
Confidence 111244 4444 357999999888899999965
No 296
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=66.52 E-value=93 Score=29.78 Aligned_cols=211 Identities=8% Similarity=-0.061 Sum_probs=96.4
Q ss_pred eeCcEEEEeeCCCC--ceEEEEEcCcccceeccCCC-CCCC-CCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc
Q 046684 92 SIGSFLLLRPINST--ILQLVLCNPFTRQFRYLPLL-NVSR-TNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT 167 (373)
Q Consensus 92 ~~~g~l~~~gg~~~--~~~~~v~np~t~~w~~lp~~-~~~~-~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~ 167 (373)
.-|+.+|..-.... ...+++.+..+++++.+-.. .... ......... .+ +|++.++++... ...
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~--~S-----PDg~~la~~~~~-----~G~ 148 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYA--FS-----EDGEYFAYGLSA-----SGS 148 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEE--EC-----TTSSEEEEEEEE-----TTC
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEE--EC-----CCCCEEEEEEcC-----CCC
Confidence 44566655432211 23677777777777654211 1111 111121111 11 125444444322 222
Q ss_pred ccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCE-EEEEEcC--------------CceEEEEEECCCCc
Q 046684 168 YESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGM-LYWITSA--------------RAYSVIGFDIESNT 231 (373)
Q Consensus 168 ~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~-ly~~gg~--------------~~~~i~~yd~~~~~ 231 (373)
....++++|..+++....... . ......+.. +|+ |++.... ....|+.+++.+++
T Consensus 149 ~~~~i~v~d~~tg~~~~~~~~-------~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 149 DWVTIKFMKVDGAKELPDVLE-------R--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp SCEEEEEEETTTTEEEEEEEE-------E--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ceEEEEEEECCCCCCCccccc-------C--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 235799999999887653211 1 111223343 554 4444311 13358888988766
Q ss_pred EE--ecccCCCC-CCCceeEE-EECCEEEEEEee-cCC-ceEEEEeecCCCC------C--CeEEEEeechhhhhhhcCC
Q 046684 232 WR--ELSAPMAD-RLEFATLV-SRNQKLTLIGGT-CGG-DACVWELSEGGDD------D--IWCLIEKVPIEMGMRLSGG 297 (373)
Q Consensus 232 w~--~~~~~~p~-~~~~~~~~-~~~g~l~~~gg~-~~~-~~~i~~~~~~~~~------~--~W~~v~~~p~~~~~~~~~~ 297 (373)
-. .+ ...+. ........ .-+|+..++... ... ..++|..+. ++ . .+..+..-....
T Consensus 220 ~~~~~v-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~--~~~~~~~~~~~~~~~l~~~~~~~------- 289 (710)
T 2xdw_A 220 SEDILC-AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL--QQESNGITGILKWVKLIDNFEGE------- 289 (710)
T ss_dssp GGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG--GGSSSSSCSSCCCEEEECSSSSC-------
T ss_pred ccceEE-eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEEC--cccccccCCccceEEeeCCCCcE-------
Confidence 32 22 12111 11112222 235554443333 211 224444443 21 2 566664321111
Q ss_pred CCCCCceEEEecCCEEEEEEcC---CccEEEEEccccCCcc-cEEEe
Q 046684 298 KASWGGTRCAAGNGAICLYREV---GLGMIIWREDEDKRKW-EWVWV 340 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~yd~~~~~~~~-~W~~~ 340 (373)
...+...|+.|++.... ...++.+|++ +.+. .|+.+
T Consensus 290 -----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~~~~~~l 329 (710)
T 2xdw_A 290 -----YDYVTNEGTVFTFKTNRHSPNYRLINIDFT--DPEESKWKVL 329 (710)
T ss_dssp -----EEEEEEETTEEEEEECTTCTTCEEEEEETT--SCCGGGCEEE
T ss_pred -----EEEEeccCCEEEEEECCCCCCCEEEEEeCC--CCCcccceec
Confidence 13344567888887653 2469999988 6521 36655
No 297
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=65.34 E-value=77 Score=28.39 Aligned_cols=106 Identities=9% Similarity=0.037 Sum_probs=58.0
Q ss_pred CEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEE-EECCEEEEEEeecCC-ceEEEEeecCCCCCCeEEEEee
Q 046684 209 GMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLV-SRNQKLTLIGGTCGG-DACVWELSEGGDDDIWCLIEKV 286 (373)
Q Consensus 209 g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~-~~~g~l~~~gg~~~~-~~~i~~~~~~~~~~~W~~v~~~ 286 (373)
|.||+.-.. ..|..+|+++++...+ .. ..... .+++ ..+|.||+....... ...++.+.. ...+.....+
T Consensus 153 g~Lyv~D~~--~~I~~id~~~g~v~~~-~~-~~~~P-~giavd~dG~lyVad~~~~~~~~gv~~~~~---~~~~~~~~~~ 224 (433)
T 4hw6_A 153 DDLYWVGQR--DAFRHVDFVNQYVDIK-TT-NIGQC-ADVNFTLNGDMVVVDDQSSDTNTGIYLFTR---ASGFTERLSL 224 (433)
T ss_dssp CEEEEECBT--SCEEEEETTTTEEEEE-CC-CCSCE-EEEEECTTCCEEEEECCSCTTSEEEEEECG---GGTTCCEEEE
T ss_pred CEEEEEeCC--CCEEEEECCCCEEEEe-ec-CCCCc-cEEEECCCCCEEEEcCCCCcccceEEEEEC---CCCeeccccc
Confidence 899998432 7899999999888877 33 11111 2222 236678888642211 122333332 1223211112
Q ss_pred chhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 287 PIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+. +.. .....+...++.||+.....+.++.||++ ++
T Consensus 225 ~~--~~~-------P~giavd~~~G~lyv~d~~~~~V~~~d~~--~g 260 (433)
T 4hw6_A 225 CN--ARG-------AKTCAVHPQNGKIYYTRYHHAMISSYDPA--TG 260 (433)
T ss_dssp EE--CSS-------BCCCEECTTTCCEEECBTTCSEEEEECTT--TC
T ss_pred cc--cCC-------CCEEEEeCCCCeEEEEECCCCEEEEEECC--CC
Confidence 21 100 00122222378999988777789999998 77
No 298
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=64.59 E-value=1e+02 Score=29.52 Aligned_cols=103 Identities=8% Similarity=0.019 Sum_probs=57.4
Q ss_pred ceEEEEEECCCC--cEEecccCCCCCCCceeEEEECCEEEEEEeecCCceEEEEeecC-CCCCCeEEEEeechhhhhhhc
Q 046684 219 AYSVIGFDIESN--TWRELSAPMADRLEFATLVSRNQKLTLIGGTCGGDACVWELSEG-GDDDIWCLIEKVPIEMGMRLS 295 (373)
Q Consensus 219 ~~~i~~yd~~~~--~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~-~~~~~W~~v~~~p~~~~~~~~ 295 (373)
...++.+|.++. ++..+ .+.... ....+..-++.||+....+.....++..+.. +....|+.+..-...
T Consensus 258 ~~~i~~~d~~~~~~~~~~l-~~~~~~-~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~------ 329 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTV-QGDLDA-DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ------ 329 (693)
T ss_dssp CCEEEEEETTSTTCCCEEE-ECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS------
T ss_pred CcEEEEEECCCCCCceEEE-eCCCCc-eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC------
Confidence 358999998766 67777 332221 2122445578898887654333345544431 222458865432211
Q ss_pred CCCCCCCceEEEecCCEEEEEEc--CCccEEEEEccccCCcccEEEe
Q 046684 296 GGKASWGGTRCAAGNGAICLYRE--VGLGMIIWREDEDKRKWEWVWV 340 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~yd~~~~~~~~~W~~~ 340 (373)
...+...++.|++... ....+.++|++ .+ ..+.+
T Consensus 330 -------~~~~s~~g~~lv~~~~~~g~~~l~~~d~~--g~--~~~~l 365 (693)
T 3iuj_A 330 -------VLTVHSGSGYLFAEYMVDATARVEQFDYE--GK--RVREV 365 (693)
T ss_dssp -------CEEEEEETTEEEEEEEETTEEEEEEECTT--SC--EEEEE
T ss_pred -------EEEEEEECCEEEEEEEECCeeEEEEEECC--CC--eeEEe
Confidence 1244555777766543 23468899988 76 55554
No 299
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=62.92 E-value=53 Score=25.74 Aligned_cols=110 Identities=10% Similarity=-0.020 Sum_probs=57.9
Q ss_pred CcEEEEeeCCCCceEEEEEcCcccce-eccCC--CCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccc
Q 046684 94 GSFLLLRPINSTILQLVLCNPFTRQF-RYLPL--LNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYES 170 (373)
Q Consensus 94 ~g~l~~~gg~~~~~~~~v~np~t~~w-~~lp~--~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~ 170 (373)
+|.+|++-| +.+++|+..+-.- +.|.. +|......-+++.. .+ +++|.+-|.
T Consensus 64 ~~~~yfFkG----~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~----~~-----g~~yfFkg~------------ 118 (195)
T 1itv_A 64 SKKLFFFSG----RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRS----GR-----GKMLLFSGR------------ 118 (195)
T ss_dssp TCCEEEEET----TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEEC----ST-----TEEEEEETT------------
T ss_pred CCeEEEEeC----CEEEEEcCCccCCCEEeeecccCCCccceeEEEEc----CC-----CeEEEEeCC------------
Confidence 788999887 6788887653221 01111 11111123333332 12 789998654
Q ss_pred eEEEEECCCCceeeecCCCcccc--ccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEE
Q 046684 171 MVEMYDSRHDAWQIIGSMPVEFA--VRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWR 233 (373)
Q Consensus 171 ~~~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~ 233 (373)
..+.||..+++=. ...|.... .+..+..-.++...+|.+|++-| ...+.||..+.+-.
T Consensus 119 ~ywr~d~~~~~~~--~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg---~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 119 RLWRFDVKAQMVD--PRSASEVDRMFPGVPLDTHDVFQFREKAYFCQD---RFYWRVSSRSELNQ 178 (195)
T ss_dssp EEEEEETTTTEEC--GGGCEEHHHHSTTSCSSCSEEEEETTEEEEEET---TEEEEEECCTTCCE
T ss_pred EEEEEeCCccccc--CCCccChhhcCCCCCCCCCEEEEeCCeEEEEeC---CEEEEEECCccEEe
Confidence 3788988765311 11121100 00111122344556899999954 47888998776533
No 300
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=62.44 E-value=1.1e+02 Score=29.13 Aligned_cols=19 Identities=16% Similarity=-0.174 Sum_probs=14.6
Q ss_pred eEEEEEcCcccceeccCCC
Q 046684 107 LQLVLCNPFTRQFRYLPLL 125 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~ 125 (373)
..++++|..+++.+.+...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~ 109 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPP 109 (723)
T ss_dssp SEEEEEESSSCCCEECCCT
T ss_pred eeEEEEECCCCceEeccCC
Confidence 6799999999887666543
No 301
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=62.09 E-value=77 Score=27.32 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=50.8
Q ss_pred ceEEEEECCCCceeeecCCCccccccceeccCCceEEE-C-CEEEEEEc--------CCceEEEEEECCCCcE-EecccC
Q 046684 170 SMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-R-GMLYWITS--------ARAYSVIGFDIESNTW-RELSAP 238 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~-g~ly~~gg--------~~~~~i~~yd~~~~~w-~~~~~~ 238 (373)
..+++||..+++-. ..+|.. ... ..++- + ..+|+... ...+.|..||+.+.+- ..++.+
T Consensus 31 ~~v~v~D~~t~~~~--~~i~~g-------~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 31 SRVHVYDYTNGKFL--GMVPTA-------FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP 100 (361)
T ss_dssp CEEEEEETTTCCEE--EEEECC-------EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred CeEEEEECCCCeEE--EEecCC-------CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence 47889998777532 222211 111 22222 3 46787741 1245699999987654 333111
Q ss_pred CCC---CCCceeEEEE-CC-EEEEEEeecCCceEEEEeecCCCCCCeEEEEe-ech
Q 046684 239 MAD---RLEFATLVSR-NQ-KLTLIGGTCGGDACVWELSEGGDDDIWCLIEK-VPI 288 (373)
Q Consensus 239 ~p~---~~~~~~~~~~-~g-~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~-~p~ 288 (373)
... ...-..++.. +| .||+........+.+|+++. .+.+.. ++.
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~------~~~~~~~i~~ 150 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK------GDYVEDVTAA 150 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT------TEEEEEEGGG
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC------CcEEEEEecC
Confidence 111 1112233332 55 45555432234477887754 356666 554
No 302
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=61.92 E-value=43 Score=34.03 Aligned_cols=93 Identities=11% Similarity=0.086 Sum_probs=47.7
Q ss_pred ceEE-EEECCCCceeeecCCCccccccceeccCCceEE-ECCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCcee
Q 046684 170 SMVE-MYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVC-TRGMLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFAT 247 (373)
Q Consensus 170 ~~~~-~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~-~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~ 247 (373)
..++ +||..++.-+.+.... .. ....++ -+|+..+++ .....+..+|+++++-..+ ...........
T Consensus 358 ~~l~~~~d~~~~~~~~l~~~~--------~~-~~~~~~SpDG~~la~~-~~~~~v~~~d~~tg~~~~~-~~~~~~~v~~~ 426 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEENL--------GN-VFAMGVDRNGKFAVVA-NDRFEIMTVDLETGKPTVI-ERSREAMITDF 426 (1045)
T ss_dssp EEEEEEEETTTCCEEECCCCC--------CS-EEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEE-EECSSSCCCCE
T ss_pred CceEEEEECCCCCceEecCCc--------cc-eeeeEECCCCCEEEEE-CCCCeEEEEECCCCceEEe-ccCCCCCccce
Confidence 4678 8998887655544110 00 011122 256544443 3356899999998887666 32211111111
Q ss_pred EEEECCEEEEEEeecC---------CceEEEEeec
Q 046684 248 LVSRNQKLTLIGGTCG---------GDACVWELSE 273 (373)
Q Consensus 248 ~~~~~g~l~~~gg~~~---------~~~~i~~~~~ 273 (373)
...-+|+..++.+... ..+.+|+++.
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 2233666555554432 1367777643
No 303
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=61.34 E-value=76 Score=27.02 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=42.0
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE--CCEEEEEEcC--CceEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT--RGMLYWITSA--RAYSVIGF 225 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~--~g~ly~~gg~--~~~~i~~y 225 (373)
++||++.... .......+.+||+.+++-...-.+|.... ........+++- +|.+|+.... ....|..|
T Consensus 78 g~L~v~D~g~-----~~~~~~~i~~~d~~tg~~~~~~~~~~~~~--~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 78 GIVWMLDNGN-----QSKSVPKLVAWDTLNNQLSRVIYLPPPIT--LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp SEEEEEECHH-----HHTSCCEEEEEETTTTEEEEEEECCTTTS--CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred CcEEEEcCCC-----CcCCCCeEEEEECCCCeEEEEEECChhhc--ccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 7899875210 00012468999998887332222221100 011112333444 4788888421 46789999
Q ss_pred ECCCCc-EEec
Q 046684 226 DIESNT-WREL 235 (373)
Q Consensus 226 d~~~~~-w~~~ 235 (373)
|+.+++ |+.+
T Consensus 151 d~~~g~~~r~~ 161 (343)
T 2qe8_A 151 DLQTGLAARVL 161 (343)
T ss_dssp ETTTCCEEEEC
T ss_pred ECCCCCEEEEe
Confidence 998664 5544
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=61.14 E-value=1e+02 Score=28.33 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=61.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEecccCCCCCC-Cc-eeEEE--------ECCE-EEEEEeecCC---ceEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRELSAPMADRL-EF-ATLVS--------RNQK-LTLIGGTCGG---DACVWELSE 273 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~-~~-~~~~~--------~~g~-l~~~gg~~~~---~~~i~~~~~ 273 (373)
++.||+.. .....|..+|++++....+ ....... .. ..++. .+|. ||+.....+. ...++.++.
T Consensus 151 ~~~Lyv~~-~~~~~i~~ID~~~~~v~~l-~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r 228 (496)
T 3kya_A 151 KDHLYICY-DGHKAIQLIDLKNRMLSSP-LNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKR 228 (496)
T ss_dssp EEEEEEEE-ETEEEEEEEETTTTEEEEE-ECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEEC
T ss_pred CCEEEEEE-CCCCeEEEEECCCCEEEEE-EccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEec
Confidence 37799884 3356799999999998887 4443211 12 23333 2454 8887654422 234555532
Q ss_pred CCCCCCeE------EEEeechhhhhhhcCCCCCCCceEEEec--CCEEEEEEcCCccEEEEEcc
Q 046684 274 GGDDDIWC------LIEKVPIEMGMRLSGGKASWGGTRCAAG--NGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 274 ~~~~~~W~------~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~yd~~ 329 (373)
.....|. .+..... +..++.+ ++.||+.....+.++.||++
T Consensus 229 -~~~G~~~~~~~~~~v~~~~~--------------p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 229 -NADGTFDDRSDIQLIAAYKQ--------------CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp -CTTSCCSTTSCEEEEEEESC--------------CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred -CCCCceeecccceeeccCCC--------------ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 0223453 3332211 2333333 68999998887889999996
No 305
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=60.13 E-value=88 Score=27.31 Aligned_cols=195 Identities=11% Similarity=0.124 Sum_probs=94.1
Q ss_pred EEEEeCCC--CCccccCCCCCCCCceeEEee---CcEEEEeeCCC-CceEEEEEcCcccceeccCCC---CCCC------
Q 046684 65 CYVHNPVS--DKWHVLSLDFLPYPVRPVSSI---GSFLLLRPINS-TILQLVLCNPFTRQFRYLPLL---NVSR------ 129 (373)
Q Consensus 65 ~~~~d~~~--~~w~~~~~~~~~~~~~~~~~~---~g~l~~~gg~~-~~~~~~v~np~t~~w~~lp~~---~~~~------ 129 (373)
+..++... .+|.............+++.. .+.||+.+... ...-++..+..-++|+++... +...
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~ 112 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGR 112 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CC
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccc
Confidence 44566544 689876321111112233332 57788765421 011578888888899887532 1111
Q ss_pred CCCeE-EEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCC---Ccc--cccc----ceec
Q 046684 130 TNPAV-GIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSM---PVE--FAVR----LTVW 199 (373)
Q Consensus 130 ~~~~~-~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~--~~~~----~~~~ 199 (373)
....+ ++..++.... +.+|+.+.. ..++..+-...+|+.+... |.. +... ....
T Consensus 113 ~~~~i~~l~~~~~~~~-----~~l~~g~~~-----------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 113 VVDHVFWLTPGHASEP-----GTWYAGTSP-----------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCEEEEEEECCTTST-----TCEEEEEET-----------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred cccceeEEEeCCCCCC-----CEEEEEecC-----------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCC
Confidence 11122 2222221102 667775422 2466666667889987532 110 0000 0000
Q ss_pred cCCceEEE----CCEEEEEEcCCceEEEEEECCCCcEEecccCC-----CCC-----CCceeEEEEC---CEEEEEEeec
Q 046684 200 TPNESVCT----RGMLYWITSARAYSVIGFDIESNTWRELSAPM-----ADR-----LEFATLVSRN---QKLTLIGGTC 262 (373)
Q Consensus 200 ~~~~~~~~----~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~-----p~~-----~~~~~~~~~~---g~l~~~gg~~ 262 (373)
.....+.+ .+.+|+... ...++..+-..++|+.+...+ |.. .....++... +.||+.. ..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~--~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~~ 253 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMS--SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-HC 253 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEE--TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-TT
T ss_pred CceeEEEECCCCCCEEEEEEC--CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-CC
Confidence 00112233 256777632 245777777788999873221 111 1112333321 5666643 11
Q ss_pred CCceEEEEeecCCCCCCeEEEE
Q 046684 263 GGDACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 263 ~~~~~i~~~~~~~~~~~W~~v~ 284 (373)
.+|...+ ...+|+.+.
T Consensus 254 ----gl~~s~D--~G~tW~~~~ 269 (394)
T 3b7f_A 254 ----GIYRMDR--REGVWKRIG 269 (394)
T ss_dssp ----EEEEEET--TTTEEECGG
T ss_pred ----eEEEeCC--CCCcceECC
Confidence 3777776 678898874
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=57.11 E-value=98 Score=26.94 Aligned_cols=139 Identities=11% Similarity=0.054 Sum_probs=76.4
Q ss_pred ceEEEEECCCCceeeecCC-CccccccceeccCCceEEECCEE----EEEEcCC--ceEEEEE--ECCCCcEEecccC-C
Q 046684 170 SMVEMYDSRHDAWQIIGSM-PVEFAVRLTVWTPNESVCTRGML----YWITSAR--AYSVIGF--DIESNTWRELSAP-M 239 (373)
Q Consensus 170 ~~~~~yd~~~~~W~~~~~~-p~~~~~~~~~~~~~~~~~~~g~l----y~~gg~~--~~~i~~y--d~~~~~w~~~~~~-~ 239 (373)
..+.+||...+.=..++.- +.. ...+ ....++|+- |+. .+. .+.+..| |++++++..+..+ .
T Consensus 50 ~gL~Vydl~G~~l~~~~~g~~nn----VD~r---~~~~l~g~~~dla~as-~R~~~~n~l~vf~iDp~~~~l~~i~~~~~ 121 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNTGKLNN----VDIR---YDFPLNGKKVDIAAAS-NRSEGKNTIEIYAIDGKNGTLQSMTDPDH 121 (355)
T ss_dssp TEEEEEETTSCEEEEECCSCEEE----EEEE---EEEEETTEEEEEEEEE-ECSTTCCEEEEEEECTTTCCEEECSCTTS
T ss_pred CCEEEEcCCCcEEEEccCCCccc----EEEe---cccccCCceEeEEEEe-CCCCCCCeEEEEEECCCCCceeecccccc
Confidence 4799999955544444321 110 0011 123345542 333 344 5667777 7788899888321 1
Q ss_pred C--CC-CCceeEEEE----CCEEEEEEeecCCceEEEEeecCCCCCCe--EEEEeechhhhhhhcCCCCCCCceEEEec-
Q 046684 240 A--DR-LEFATLVSR----NQKLTLIGGTCGGDACVWELSEGGDDDIW--CLIEKVPIEMGMRLSGGKASWGGTRCAAG- 309 (373)
Q Consensus 240 p--~~-~~~~~~~~~----~g~l~~~gg~~~~~~~i~~~~~~~~~~~W--~~v~~~p~~~~~~~~~~~~~~~~~~~~~~- 309 (373)
| .. ..-++++.. .+++|++-...+..+..|++... ..... +.+.+++... ..-.|+..
T Consensus 122 pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~-~~g~~~~~lVR~f~lgs-----------q~EgcvvDd 189 (355)
T 3amr_A 122 PIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKAD-KNGYISGKKVRAFKMNS-----------QTEGMAADD 189 (355)
T ss_dssp CEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEEC-TTSCEEEEEEEEEECSS-----------CEEEEEEET
T ss_pred CcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeC-CCCcccceEEEEecCCC-----------CcceEEEcC
Confidence 3 22 344455552 46777776666666888888651 11222 4455544432 14566665
Q ss_pred -CCEEEEEEcCCccEEEEEcc
Q 046684 310 -NGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 310 -~~~i~~~~~~~~~~~~yd~~ 329 (373)
.+.||+-... ..||.||.+
T Consensus 190 ~~g~Lyv~eEd-~GIw~~da~ 209 (355)
T 3amr_A 190 EYGRLYIAEED-EAIWKFSAE 209 (355)
T ss_dssp TTTEEEEEETT-TEEEEEECS
T ss_pred CCCeEEEeccc-ceEEEEeCC
Confidence 5788887665 469999944
No 307
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=55.11 E-value=94 Score=26.08 Aligned_cols=57 Identities=12% Similarity=-0.025 Sum_probs=31.4
Q ss_pred ceEEEEEECCCCcE-EecccCCCCCCCceeEEEECCEEEEEEeecC-----C-ceEEEEeecCCCCCCeEEEE
Q 046684 219 AYSVIGFDIESNTW-RELSAPMADRLEFATLVSRNQKLTLIGGTCG-----G-DACVWELSEGGDDDIWCLIE 284 (373)
Q Consensus 219 ~~~i~~yd~~~~~w-~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~~-----~-~~~i~~~~~~~~~~~W~~v~ 284 (373)
...|+.+|+.+++. ..+ .. + ....+....+.+++++.... . ...+|.++. ..++.+.
T Consensus 151 ~~~l~~~d~~~~~~~~~l-~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~----~~~~~l~ 214 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEF-EK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWED----GKEEKMF 214 (347)
T ss_dssp EEEEEEEETTTTEEEEEE-EE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEET----TEEEEEE
T ss_pred cceEEEEECCCCeEEeee-cC-C---CcccccCCCCeEEEEEecccccccccccccEEEeCC----CceEEec
Confidence 36799999998887 666 23 3 22233333333555553332 1 347887763 5555554
No 308
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=54.31 E-value=1.3e+02 Score=27.65 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=31.4
Q ss_pred EEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcC---CceEEEEEECCCCcEEec
Q 046684 173 EMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSA---RAYSVIGFDIESNTWREL 235 (373)
Q Consensus 173 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~---~~~~i~~yd~~~~~w~~~ 235 (373)
.+||..+++-+.+...+ . ......-+|+..+.+.. ....|+.+|+++++.+.+
T Consensus 135 ~l~d~~~g~~~~l~~~~-------~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 135 ALYALDGGGLRELARLP-------G---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp EEEEEETTEEEEEEEES-------S---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred eEEEccCCcEEEeecCC-------C---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 37888888766554321 1 11122346665444321 235699999999988776
No 309
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=54.18 E-value=1.3e+02 Score=27.34 Aligned_cols=120 Identities=9% Similarity=-0.009 Sum_probs=59.2
Q ss_pred CceEEEEEECCCCcEEecccCCCCCCCce-eEEE---ECC-EEEEEEee----cCCceEEEEeecCCCCCCeEEEEee--
Q 046684 218 RAYSVIGFDIESNTWRELSAPMADRLEFA-TLVS---RNQ-KLTLIGGT----CGGDACVWELSEGGDDDIWCLIEKV-- 286 (373)
Q Consensus 218 ~~~~i~~yd~~~~~w~~~~~~~p~~~~~~-~~~~---~~g-~l~~~gg~----~~~~~~i~~~~~~~~~~~W~~v~~~-- 286 (373)
....|..||.++++-... .+.+...... .+.. -++ .+|++.-. ....+.+|..+. .+|+.+..+
T Consensus 226 ~~d~V~v~D~~~~k~~~t-I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~----g~~~~~~vIdi 300 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHS-LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED----GKWNAEKVIEI 300 (462)
T ss_dssp SCCEEEEEETTTTEEEEE-EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET----TEEEEEEEEEE
T ss_pred cCCEEEEEECCCCcEeeE-EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC----CceeEEEEEeC
Confidence 368899999987643322 2332111111 1111 134 45555431 222356666654 778877654
Q ss_pred chhhhhh----hcC---C-CCCCCceEEEecCCEEEEEEcCCccEEEEEccccCCcccEEEeccccc
Q 046684 287 PIEMGMR----LSG---G-KASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKRKWEWVWVGGCCL 345 (373)
Q Consensus 287 p~~~~~~----~~~---~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~~~~W~~~~~~~~ 345 (373)
+...... +.. . ........+...|..||+.+...+.|.+||.. +.. +.+.+...+.
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~--~~~lv~~I~t 364 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPF--KPVLTGKVKL 364 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STT--SCEEEEEEEC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCC--CcEEEEEEEe
Confidence 2211000 000 0 00112334444567899988888899999984 133 3444444433
No 310
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=52.65 E-value=1.2e+02 Score=26.48 Aligned_cols=138 Identities=7% Similarity=0.034 Sum_probs=66.0
Q ss_pred ceEEEEECCCCce-eeecCCCccccccceeccCCc-eEEECCEEEEE-----------EcCCceEEEEEECCCCcEEec-
Q 046684 170 SMVEMYDSRHDAW-QIIGSMPVEFAVRLTVWTPNE-SVCTRGMLYWI-----------TSARAYSVIGFDIESNTWREL- 235 (373)
Q Consensus 170 ~~~~~yd~~~~~W-~~~~~~p~~~~~~~~~~~~~~-~~~~~g~ly~~-----------gg~~~~~i~~yd~~~~~w~~~- 235 (373)
..+.++|.++++- +.+..-. ........ ...-+|++.+. .|.....+..+|+.+++-..+
T Consensus 203 ~TIkIWDl~TGk~l~tL~g~~------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 203 NNIVIWNLKTGQLLKKMHIDD------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp SEEEEEETTTCCEEEEEECCC---------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCC------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 5789999998873 3332110 00000101 12235665543 234556777889987764332
Q ss_pred ccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEE
Q 046684 236 SAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAIC 314 (373)
Q Consensus 236 ~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 314 (373)
....|.......+ ....+.+.+ .+..+..+.+|++.. .+ .+..+..... ......++..++..+
T Consensus 277 ~~~~p~Gh~~~~lsg~~sg~~lA-SgS~DgTIkIWDl~t----Gk--~l~tL~gH~~--------~vvs~vafSPDG~~L 341 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDVKDHCAA-AILTSGTIAIWDLLL----GQ--CTALLPPVSD--------QHWSFVKWSGTDSHL 341 (356)
T ss_dssp EECCCTTCCCCEEEEEEETTEEE-EEETTSCEEEEETTT----CS--EEEEECCC----------CCCCEEEECSSSSEE
T ss_pred EeeccCCCcceeEccccCCCEEE-EEcCCCcEEEEECCC----Cc--EEEEecCCCC--------CeEEEEEECCCCCEE
Confidence 0112222211111 112233444 444445689999965 43 3334431110 000123344567777
Q ss_pred EEEcCCccEEEEEc
Q 046684 315 LYREVGLGMIIWRE 328 (373)
Q Consensus 315 ~~~~~~~~~~~yd~ 328 (373)
+.+..++.|.+||.
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 77877778888885
No 311
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=51.66 E-value=1e+02 Score=26.73 Aligned_cols=102 Identities=11% Similarity=0.068 Sum_probs=53.4
Q ss_pred EEEEcCCceEEEEEECCCCcEEe---cccCCCCCCCceeEEEE----------CCEEEEEEeecCCceEEEEeecCCCCC
Q 046684 212 YWITSARAYSVIGFDIESNTWRE---LSAPMADRLEFATLVSR----------NQKLTLIGGTCGGDACVWELSEGGDDD 278 (373)
Q Consensus 212 y~~gg~~~~~i~~yd~~~~~w~~---~~~~~p~~~~~~~~~~~----------~g~l~~~gg~~~~~~~i~~~~~~~~~~ 278 (373)
++..+.....|..+|.++++-.. + ..+..+......+.. +|++++.++. +..+.+|++.. . .
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~-~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~-D~tv~~Wd~~~--~-~ 177 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVL-GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD-DCTLIIWRLTD--E-G 177 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEE-CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET-TSEEEEEEEET--T-E
T ss_pred EEEEEeCCCcEEEEECCCCccceeeee-cccCCCCCceEEEEEccccccccCCCCCEEEEEEC-CCeEEEEECCC--C-c
Confidence 33334445667778877765432 2 233333322222222 5666666654 44589999975 1 1
Q ss_pred CeEEEEeechhhhhhhcCCCCCCCceEEEec--CCEEEEEEcCCccEEEEEccccCC
Q 046684 279 IWCLIEKVPIEMGMRLSGGKASWGGTRCAAG--NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 279 ~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
.=......... ...+... +..+++.++..+.+.+||.+ ++
T Consensus 178 ~~~~~~~~~~~-------------v~~v~~~p~~~~~l~~~~~d~~v~~wd~~--t~ 219 (393)
T 4gq1_A 178 PILAGYPLSSP-------------GISVQFRPSNPNQLIVGERNGNIRIFDWT--LN 219 (393)
T ss_dssp EEEEEEECSSC-------------EEEEEEETTEEEEEEEEETTSEEEEEETT--CC
T ss_pred eeeeecCCCCC-------------cEEEEECCCCCceEEecCCCCEEEEEECC--CC
Confidence 11111111111 1222222 34577778788889999998 76
No 312
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=51.26 E-value=1.1e+02 Score=25.67 Aligned_cols=129 Identities=6% Similarity=-0.045 Sum_probs=64.9
Q ss_pred ceEEEEEcCcccce-eccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCC-c--c-cceEEEEECCCC
Q 046684 106 ILQLVLCNPFTRQF-RYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGA-T--Y-ESMVEMYDSRHD 180 (373)
Q Consensus 106 ~~~~~v~np~t~~w-~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~-~--~-~~~~~~yd~~~~ 180 (373)
...++++|..+++. +.+.. + ...... ... ++ +++.+... .. . . ...++.+| ++
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~---~~~~~~-~sp---------dg-~~~~~~~~-----~~~~~~~~~~~l~~~d--~~ 208 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P---RFSSGI-WHR---------DK-IVVNVPHR-----EIIPQYFKFWDIYIWE--DG 208 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E---TTCEEE-EET---------TE-EEEEEECC-----CSSCCSSCCEEEEEEE--TT
T ss_pred cceEEEEECCCCeEEeeecC-C---Cccccc-CCC---------Ce-EEEEEecc-----cccccccccccEEEeC--CC
Confidence 35799999999887 66544 2 222222 221 16 55555332 11 1 2 45778888 66
Q ss_pred ceeeecCCCccccccceeccCCceEEECCE-EEEEEcC------CceEEEEEECCCCcEEecccCCCCCCCceeEEEECC
Q 046684 181 AWQIIGSMPVEFAVRLTVWTPNESVCTRGM-LYWITSA------RAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQ 253 (373)
Q Consensus 181 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~-ly~~gg~------~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g 253 (373)
+++.+..- .......-+|+ +++.+.. ....|+.+| +++...+ .+.........+...+|
T Consensus 209 ~~~~l~~~-----------~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l-~~~~~~~~~~~~~~sdg 274 (347)
T 2gop_A 209 KEEKMFEK-----------VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI-LDEVDRGVGQAKIKDGK 274 (347)
T ss_dssp EEEEEEEE-----------ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES-STTCCSEEEEEEEETTE
T ss_pred ceEEeccC-----------cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec-cccCCcccCCccEEcCc
Confidence 66655321 01111244564 5555422 135799999 6666666 22211111111222255
Q ss_pred EEEEEEeecCCceEEEEeec
Q 046684 254 KLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 254 ~l~~~gg~~~~~~~i~~~~~ 273 (373)
+++.+..+ ....+| ++.
T Consensus 275 -~~~~~~~~-~~~~l~-~~~ 291 (347)
T 2gop_A 275 -VYFTLFEE-GSVNLY-IWD 291 (347)
T ss_dssp -EEEEEEET-TEEEEE-EES
T ss_pred -EEEEEecC-CcEEEE-EcC
Confidence 66665444 346889 864
No 313
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=49.60 E-value=1.5e+02 Score=26.79 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=59.8
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccc--e-------eccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCC
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQ--F-------RYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPR 163 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~--w-------~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~ 163 (373)
.+|.+|++-| +.+|+++..+-. + .-+|..+ ...-+++... .+ +++|++-|.
T Consensus 317 ~~g~~~fFKg----~~~W~~~~~~~~~gyP~~i~~~~g~P~~~---~~IDAA~~~~---~~-----~k~yfFkG~----- 376 (450)
T 1su3_A 317 DRDEVRFFKG----NKYWAVQGQNVLHGYPKDIYSSFGFPRTV---KHIDAALSEE---NT-----GKTYFFVAN----- 376 (450)
T ss_dssp GGTEEEEEET----TEEEEEETTEECTTCSEEHHHHHCCCTTC---CCCCEEEEET---TT-----TEEEEEETT-----
T ss_pred CCCeEEEEeC----CEEEEecCCcccCCCceeeehhhcCCCCC---CccceEEEEc---CC-----CeEEEEeCC-----
Confidence 3789999887 578888754311 0 0122222 1223333331 11 789998764
Q ss_pred CCCcccceEEEEECCCCceeeecCCCcccc--ccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEe
Q 046684 164 GGATYESMVEMYDSRHDAWQIIGSMPVEFA--VRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRE 234 (373)
Q Consensus 164 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~ 234 (373)
..+.||..+++ ..+..|.... .+..+..-.+++..+|++|++-| ...+.||..+.+-..
T Consensus 377 -------~yw~yd~~~~~--~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg---~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 377 -------KYWRYDEYKRS--MDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHG---TRQYKFDPKTKRILT 437 (450)
T ss_dssp -------EEEEEETTTTE--ECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEET---TEEEEEETTTTEEEE
T ss_pred -------EEEEEeCCCcc--ccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeC---CEEEEEECCcceEec
Confidence 47899876542 2222232110 01111222344556899999954 478999988776543
No 314
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=48.21 E-value=1.9e+02 Score=27.73 Aligned_cols=209 Identities=9% Similarity=-0.076 Sum_probs=95.9
Q ss_pred eeCcEEEEeeCCCC--ceEEEEEcCc---ccceeccCCCCC-CCCC-CeEEEEEcCCCCCCCCCceEEEEEeccCCCCCC
Q 046684 92 SIGSFLLLRPINST--ILQLVLCNPF---TRQFRYLPLLNV-SRTN-PAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRG 164 (373)
Q Consensus 92 ~~~g~l~~~gg~~~--~~~~~v~np~---t~~w~~lp~~~~-~~~~-~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~ 164 (373)
.-|+.+|....... ...+++.+.. .++++.+-.... .... ....... .+ +|++.++++...
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~--~S-----PDG~~la~~~~~----- 183 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWA--AS-----DDGRLLAYSVQD----- 183 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEE--EC-----TTSSEEEEEEEE-----
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEE--EC-----CCCCEEEEEEcC-----
Confidence 45677766543322 3567888776 666766422111 1111 1111111 11 124444444222
Q ss_pred CCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEE-CCEEEEEEcC------------CceEEEEEECCCCc
Q 046684 165 GATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCT-RGMLYWITSA------------RAYSVIGFDIESNT 231 (373)
Q Consensus 165 ~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~------------~~~~i~~yd~~~~~ 231 (373)
.......++++|..+++..... .+ .......+.. +..|++.... ....|+.+++.+++
T Consensus 184 ~G~e~~~i~v~dl~tg~~~~~~-~~--------~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 184 GGSDWRTVKFVGVADGKPLADE-LK--------WVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp TTCSEEEEEEEETTTCCEEEEE-EE--------EEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCG
T ss_pred CCCceEEEEEEECCCCCCCCcc-CC--------CceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCc
Confidence 2222357999999998875431 11 0111122332 2344444311 13357888877654
Q ss_pred E--EecccCCCCC-CCceeE-EEECCEEEEEEeecC----CceEEEEeecCCCCCC-eEEEEeechhhhhhhcCCCCCCC
Q 046684 232 W--RELSAPMADR-LEFATL-VSRNQKLTLIGGTCG----GDACVWELSEGGDDDI-WCLIEKVPIEMGMRLSGGKASWG 302 (373)
Q Consensus 232 w--~~~~~~~p~~-~~~~~~-~~~~g~l~~~gg~~~----~~~~i~~~~~~~~~~~-W~~v~~~p~~~~~~~~~~~~~~~ 302 (373)
- ..+ ...+.. ...... ..-+|+..++..... ..+.+|+++. .... |..+..-....
T Consensus 255 ~~~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~--~~~~~~~~l~~~~~~~------------ 319 (741)
T 1yr2_A 255 SADQPV-FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN--GKIGPVTALIPDLKAQ------------ 319 (741)
T ss_dssp GGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET--TEECCCEEEECSSSSC------------
T ss_pred hhCEEE-eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC--CCCcccEEecCCCCce------------
Confidence 2 122 111211 111222 223665433333322 2355555543 1115 77765322111
Q ss_pred ceEEEecCCEEEEEEcC---CccEEEEEccccC--CcccEEEe
Q 046684 303 GTRCAAGNGAICLYREV---GLGMIIWREDEDK--RKWEWVWV 340 (373)
Q Consensus 303 ~~~~~~~~~~i~~~~~~---~~~~~~yd~~~~~--~~~~W~~~ 340 (373)
...+...|+.|++.... ...++.+|++ + . .|+.+
T Consensus 320 ~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~--~~~~--~~~~l 358 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGDGAPLKKIVRVDLS--GSTP--RFDTV 358 (741)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEECS--SSSC--EEEEE
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCC--CCcc--ccEEE
Confidence 12334567888887643 3469999998 7 5 67765
No 315
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=47.83 E-value=1.4e+02 Score=25.98 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=29.3
Q ss_pred cCCceEEEEEECCCCcEEecccCCCCCCCceeE-EEECCEEEEEEeecCCceEEEEe
Q 046684 216 SARAYSVIGFDIESNTWRELSAPMADRLEFATL-VSRNQKLTLIGGTCGGDACVWEL 271 (373)
Q Consensus 216 g~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~-~~~~g~l~~~gg~~~~~~~i~~~ 271 (373)
+...+.|..+|+.+++-... ...........+ ..-+|+..+.|+ .+..+.+|++
T Consensus 301 gS~DgTIkIWDl~tGk~l~t-L~gH~~~vvs~vafSPDG~~LaSGS-~D~TIklWd~ 355 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTAL-LPPVSDQHWSFVKWSGTDSHLLAGQ-KDGNIFVYHY 355 (356)
T ss_dssp EETTSCEEEEETTTCSEEEE-ECCC--CCCCEEEECSSSSEEEEEC-TTSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEEE-ecCCCCCeEEEEEECCCCCEEEEEE-CCCcEEEecC
Confidence 44456788999998875443 221111111112 223677655554 4556899986
No 316
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=46.80 E-value=1.8e+02 Score=26.82 Aligned_cols=111 Identities=12% Similarity=0.100 Sum_probs=56.1
Q ss_pred EEECC-EEEEEEcCCceEEEEEECCCCcEEecccCCCCCCCceeEEEECCEEEEEEeec-CCceEEEEeecCCCCCCeEE
Q 046684 205 VCTRG-MLYWITSARAYSVIGFDIESNTWRELSAPMADRLEFATLVSRNQKLTLIGGTC-GGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 205 ~~~~g-~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~~~~~~~~~~~g~l~~~gg~~-~~~~~i~~~~~~~~~~~W~~ 282 (373)
...+| .++++.+. ...+..||+++++-..+ ...+. ......-+|+..+....+ +....+|.++. ++...+.
T Consensus 117 ~s~dg~~~~~~s~~-~~~~~l~d~~~g~~~~l-~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~--~~g~~~~ 189 (582)
T 3o4h_A 117 GVDTGEAVVFTGAT-EDRVALYALDGGGLREL-ARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL--SSGGLRV 189 (582)
T ss_dssp EEECSSCEEEEEEC-SSCEEEEEEETTEEEEE-EEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEET--TTCCCEE
T ss_pred eCCCCCeEEEEecC-CCCceEEEccCCcEEEe-ecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcC--CCCCceE
Confidence 34455 34444332 23344789998887766 33222 223344567665544433 22234555543 4466665
Q ss_pred EEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCc--cEEEEEccccCCcccEE
Q 046684 283 IEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGL--GMIIWREDEDKRKWEWV 338 (373)
Q Consensus 283 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~yd~~~~~~~~~W~ 338 (373)
+..-+.... .......|..|+ .....+ .++++|++ ++ +.+
T Consensus 190 l~~~~~~~~-----------~~~~SpDG~~l~-~~~~~~~~~i~~~d~~--~~--~~~ 231 (582)
T 3o4h_A 190 FDSGEGSFS-----------SASISPGMKVTA-GLETAREARLVTVDPR--DG--SVE 231 (582)
T ss_dssp ECCSSCEEE-----------EEEECTTSCEEE-EEECSSCEEEEEECTT--TC--CEE
T ss_pred eecCCCccc-----------cceECCCCCEEE-EccCCCeeEEEEEcCC--CC--cEE
Confidence 533221110 123333344555 544444 79999999 88 555
No 317
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=46.26 E-value=1.4e+02 Score=25.65 Aligned_cols=153 Identities=12% Similarity=0.193 Sum_probs=76.3
Q ss_pred cCCceEEEC--CEEEEEEcCCceEEEEEECCCCcEEecccCCC----C-CCCceeEEE----ECCEEEEEEee-------
Q 046684 200 TPNESVCTR--GMLYWITSARAYSVIGFDIESNTWRELSAPMA----D-RLEFATLVS----RNQKLTLIGGT------- 261 (373)
Q Consensus 200 ~~~~~~~~~--g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p----~-~~~~~~~~~----~~g~l~~~gg~------- 261 (373)
+.-...+.. |.+|+- ......|.++|+..+.-..+..+.. . .....++.. -+|+|+++...
T Consensus 14 yPE~~~wd~~~g~~~vs-~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQS-NLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEE-ETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEE-eccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 333444443 677765 4567899999998765544412210 0 111245555 36788886321
Q ss_pred -----cCCceEEEEee---cCCCCCCeEEEEeechhhh--hhhcCCCCCCCceEEEecCCEEEEEEcCC-ccEEEEEccc
Q 046684 262 -----CGGDACVWELS---EGGDDDIWCLIEKVPIEMG--MRLSGGKASWGGTRCAAGNGAICLYREVG-LGMIIWREDE 330 (373)
Q Consensus 262 -----~~~~~~i~~~~---~~~~~~~W~~v~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~yd~~~ 330 (373)
....+..|+++ + ....|.. .++...- ....+.......-..+..+|.+|+.+... +.|+.+|++
T Consensus 93 g~~~~g~~~v~~~Dl~~~~t--g~~~~~~--dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd- 167 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSEN--SKPVWSV--NFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD- 167 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTT--CCCSEEE--ESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-
T ss_pred ccccCCCCEEEEEcCCcCCC--CCEEEEe--cCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-
Confidence 01225666765 3 2334443 2321110 00000000000122333478999988777 889999998
Q ss_pred cCCccc-EEEecccccCCCCcccccceeEEEecccc
Q 046684 331 DKRKWE-WVWVGGCCLTGGKQVQNVPMRGVLLHPSL 365 (373)
Q Consensus 331 ~~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~p~l 365 (373)
.++.. |-.-. |.... ...+.|+.|.|.=
T Consensus 168 -G~~~~~~~~~~--~~~~~----~~G~nGIv~~pdg 196 (334)
T 2p9w_A 168 -GKTVSTFAWES--GNGGQ----RPGYSGITFDPHS 196 (334)
T ss_dssp -SCCEEEEEECC--CCSSS----CCSCSEEEEETTT
T ss_pred -CCEEeeeeecC--CCccc----ccCcceEEEeCCC
Confidence 54212 53211 11111 2357788888753
No 318
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=46.20 E-value=1.5e+02 Score=25.85 Aligned_cols=113 Identities=9% Similarity=0.030 Sum_probs=60.8
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccce---eccCC--CCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQF---RYLPL--LNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT 167 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w---~~lp~--~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~ 167 (373)
.+|.+|++-| +.+++++..+-.- +.|.. +|......-+++... .+ +++|.+-|.
T Consensus 235 ~~g~~~fFkg----~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~---~~-----~~~yfFkG~--------- 293 (365)
T 3ba0_A 235 ARNQVFLFKD----DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNP---RF-----YRTYFFVDN--------- 293 (365)
T ss_dssp GGTEEEEEET----TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEET---TT-----TEEEEEETT---------
T ss_pred CCCEEEEEeC----CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeC---CC-----CEEEEEECC---------
Confidence 4789999887 6788988653211 11221 121111223333331 11 789988754
Q ss_pred ccceEEEEECCCCceeeecCCCcccc--ccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEe
Q 046684 168 YESMVEMYDSRHDAWQIIGSMPVEFA--VRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRE 234 (373)
Q Consensus 168 ~~~~~~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~ 234 (373)
..+.||..+++- .+..|.... .+..+..-.++... +|++|++-| ...+.||..+.+-..
T Consensus 294 ---~yw~yd~~~~~v--~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg---~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 294 ---QYWRYDERRQMM--DPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG---SNQFEYDFLLQRITK 355 (365)
T ss_dssp ---EEEEEETTTTEE--CSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET---TEEEEEETTTTEEEE
T ss_pred ---EEEEEeCCccee--cCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC---CEEEEEECCccEEec
Confidence 478998765432 222222110 11112222333445 799999954 578999988776544
No 319
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=44.48 E-value=2.3e+02 Score=27.44 Aligned_cols=119 Identities=9% Similarity=0.052 Sum_probs=59.1
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCC-Cceee-ecCCCccccccceeccCCceEEECCEEEEEEc-CCceEEEEEE
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRH-DAWQI-IGSMPVEFAVRLTVWTPNESVCTRGMLYWITS-ARAYSVIGFD 226 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~-~~W~~-~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg-~~~~~i~~yd 226 (373)
.++|+....+ ......++++|..+ +.|+. +-.-.. . .........++.+++... .....+..+|
T Consensus 331 ~~l~~~t~~~------~a~~~~L~~~d~~~~~~~~~~li~~~~-----~--~~l~~~~~~~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 331 SHLVILTNEG------GAVNHKLLIAPRGQPSDWSHVLVDHSE-----D--VFMESIAVRSNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp TEEEEEECTT------TCTTCEEEEEETTSTTCCCCEEECCCS-----S--EEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEeCCC------CCCCcEEEEEcCCCcccceeeEECCCC-----C--cEEEEEEEECCEEEEEEEeCCEEEEEEEe
Confidence 6777775331 12345788888876 67876 422210 0 011122334677777652 2356788899
Q ss_pred C-------CCCc-EEecccCCCCCCCceeEE-----EEC-CEEEEEEeecCCceEEEEeecCCCCCCeEEEEe
Q 046684 227 I-------ESNT-WRELSAPMADRLEFATLV-----SRN-QKLTLIGGTCGGDACVWELSEGGDDDIWCLIEK 285 (373)
Q Consensus 227 ~-------~~~~-w~~~~~~~p~~~~~~~~~-----~~~-g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~ 285 (373)
+ .+++ ...+ +++.......+. ..+ +.+++........-.+|.++. .+.+.+.+..
T Consensus 398 l~~~~~~~~~g~~~~~l--~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~--~~~~~~~l~~ 466 (751)
T 2xe4_A 398 ADSQDGVFKAGTGLREV--VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSP--QDHSRTAVKV 466 (751)
T ss_dssp CCTTTSCCCTTTCCEEC--CCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECT--TTCCEEEEEE
T ss_pred cccccccccCCccceEE--CCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEEC--CCCcEEEEec
Confidence 6 4444 4445 233222111111 123 345444433333346777765 4566666654
No 320
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=43.70 E-value=1.7e+02 Score=25.88 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=16.4
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWREL 235 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~~ 235 (373)
+|+..+.| ...+.|..||+..+.-..+
T Consensus 203 dg~~lasg-s~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 203 KGKQLAVG-KQNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TSSCEEEE-ETTSCEEEECTTCCEEEEE
T ss_pred CCCEEEEE-cCCCcEEEEccCCcccccc
Confidence 46555554 3566799999984333333
No 321
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=41.97 E-value=1.3e+02 Score=23.81 Aligned_cols=143 Identities=12% Similarity=0.095 Sum_probs=73.5
Q ss_pred EEeeCcEEEEeeCCCCceEEEEEcCcccceec--c----CCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCC
Q 046684 90 VSSIGSFLLLRPINSTILQLVLCNPFTRQFRY--L----PLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPR 163 (373)
Q Consensus 90 ~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~--l----p~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~ 163 (373)
++..+|.+|++-| ..++..++....... + |.+|. ..-+++... .+ +++|++-|..
T Consensus 29 i~~~~g~~y~Fkg----~~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~---~~-----~~iyfFkG~~---- 89 (207)
T 1pex_A 29 ITSLRGETMIFKD----RFFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHP---SH-----DLIFIFRGRK---- 89 (207)
T ss_dssp EEEETTEEEEEET----TEEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEET---TT-----TEEEEEETTE----
T ss_pred EEeCCCcEEEEEC----CEEEEEeCCCcCCCceehhHhccCCCC---CccEEEEec---cC-----CcEEEEccCE----
Confidence 4457899999887 567777765432211 1 22332 222333221 11 7899987653
Q ss_pred CCCcccceEEEEECCCCceeeecCCCccc---cccceeccCCceEEE---CCEEEEEEcCCceEEEEEECCCCcEEeccc
Q 046684 164 GGATYESMVEMYDSRHDAWQIIGSMPVEF---AVRLTVWTPNESVCT---RGMLYWITSARAYSVIGFDIESNTWRELSA 237 (373)
Q Consensus 164 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~~---~~~~~~~~~~~~~~~---~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~ 237 (373)
+++|+.. +.....|... .+|.. .....+|+. +|++|++-| ...+.||..+++-..- .
T Consensus 90 --------~w~~~~~----~~~~gyPk~I~~~GlP~~-~~~IDAA~~~~~~gk~yfFkG---~~ywr~d~~~~~~d~g-y 152 (207)
T 1pex_A 90 --------FWALNGY----DILEGYPKKISELGLPKE-VKKISAAVHFEDTGKTLLFSG---NQVWRYDDTNHIMDKD-Y 152 (207)
T ss_dssp --------EEEESTT----CCCTTCSEESTTTTCCTT-CCCCCEEEECTTTSEEEEEET---TEEEEEETTTTEECSS-C
T ss_pred --------EEEEeCC----eeccCCceeccccCCCCC-CccccEEEEeCCCCEEEEEeC---CEEEEEeCcCccccCC-C
Confidence 6777632 2222222211 01110 012333443 489999954 5789999876542211 1
Q ss_pred CCC------C-CCCceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 238 PMA------D-RLEFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 238 ~~p------~-~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
|.+ . +..-..+...+|++|++.|. ..|.++.
T Consensus 153 Pr~i~~~~~Gip~~iDaAf~~~g~~YfFkg~-----~y~rf~~ 190 (207)
T 1pex_A 153 PRLIEEDFPGIGDKVDAVYEKNGYIYFFNGP-----IQFEYSI 190 (207)
T ss_dssp CCBHHHHSTTSCSCCSEEEEETTEEEEEETT-----EEEEEET
T ss_pred CccHHHcCCCCCCCccEEEEcCCcEEEEECC-----EEEEEeC
Confidence 111 0 11112333468999999763 5888876
No 322
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=41.23 E-value=1.8e+02 Score=25.31 Aligned_cols=190 Identities=8% Similarity=0.032 Sum_probs=90.7
Q ss_pred eeEEEEeCCCCCccccCCCCCCCCceeEEee-----Cc----EEEEeeCCCCceEEEEE--cCcccceeccCCC--C--C
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLPYPVRPVSSI-----GS----FLLLRPINSTILQLVLC--NPFTRQFRYLPLL--N--V 127 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-----~g----~l~~~gg~~~~~~~~v~--np~t~~w~~lp~~--~--~ 127 (373)
..+.+||...+.-..++. .+. +.+... +| ++++.....+.+.+.+| ||.+++++.+... | .
T Consensus 50 ~gL~Vydl~G~~l~~~~~---g~~-nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNT---GKL-NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TEEEEEETTSCEEEEECC---SCE-EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCEEEEcCCCcEEEEccC---CCc-ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 467789996655555432 121 112222 22 23443332114566666 9999999888543 3 3
Q ss_pred C-CCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCce--eeecCCCccccccceeccCCce
Q 046684 128 S-RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAW--QIIGSMPVEFAVRLTVWTPNES 204 (373)
Q Consensus 128 ~-~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~~~~~~~~~~~~~~ 204 (373)
. ..-..++++.++.++. ..+|+.+ . .......++.+...++. +.+..++. + .....
T Consensus 126 ~~~~pyGlcly~~~~~g~-----~yafV~~--k------~G~~~q~~l~~~~~g~~~~~lVR~f~l----g----sq~Eg 184 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGK-----YYAMVTG--K------EGEFEQYELKADKNGYISGKKVRAFKM----N----SQTEG 184 (355)
T ss_dssp CCSSCCCEEEEECTTTCC-----EEEEEEC--S------SSEEEEEEEEECTTSCEEEEEEEEEEC----S----SCEEE
T ss_pred CCCCeeEEEEEecCCCCc-----EEEEEEC--C------CCeEEEEEEEeCCCCcccceEEEEecC----C----CCcce
Confidence 3 4455677766544332 3344443 1 12223333444344433 22333211 1 12334
Q ss_pred EEEC---CEEEEEEcCCceEEEEEECCCC---cEEecccCCCCC---CCceeEEEE---CC--EEEEEEeecCCceEEEE
Q 046684 205 VCTR---GMLYWITSARAYSVIGFDIESN---TWRELSAPMADR---LEFATLVSR---NQ--KLTLIGGTCGGDACVWE 270 (373)
Q Consensus 205 ~~~~---g~ly~~gg~~~~~i~~yd~~~~---~w~~~~~~~p~~---~~~~~~~~~---~g--~l~~~gg~~~~~~~i~~ 270 (373)
++++ |.||+-- ....|+.||.+.+ +-+.+ ...+.. ....+++.. ++ .|++.. .....+.+|+
T Consensus 185 cvvDd~~g~Lyv~e--Ed~GIw~~da~p~~~~~~~~v-~~~~~g~l~aDvEGLai~~~~~g~gyLivSs-QG~~s~~Vyd 260 (355)
T 3amr_A 185 MAADDEYGRLYIAE--EDEAIWKFSAEPDGGSNGTVI-DRADGRHLTRDIEGLTIYYAADGKGYLMASS-QGNSSYAIYD 260 (355)
T ss_dssp EEEETTTTEEEEEE--TTTEEEEEECSTTSCSCCEEE-EEBSSSSBCSCEEEEEEEECGGGCEEEEEEE-GGGTEEEEEE
T ss_pred EEEcCCCCeEEEec--ccceEEEEeCCcCCCCCceEE-EEecCCccccCcceEEEEecCCCCEEEEEEc-CCCCEEEEEE
Confidence 5553 7899873 3356999995522 23333 121111 123345443 22 333332 3334478888
Q ss_pred eecCCCCCCeEEEEee
Q 046684 271 LSEGGDDDIWCLIEKV 286 (373)
Q Consensus 271 ~~~~~~~~~W~~v~~~ 286 (373)
.+ ..++.+...
T Consensus 261 r~-----~~~~~vg~f 271 (355)
T 3amr_A 261 RQ-----GKNKYVADF 271 (355)
T ss_dssp SS-----TTCCEEEEE
T ss_pred CC-----CCCcEEEEE
Confidence 74 245566554
No 323
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=41.21 E-value=1.8e+02 Score=25.27 Aligned_cols=244 Identities=9% Similarity=0.115 Sum_probs=120.0
Q ss_pred eEEEEeCCCCCccccCCCC-CC-C--------Cce--eEEee----CcEEEEeeCCCCceEEEEEcCcccceeccCCC--
Q 046684 64 CCYVHNPVSDKWHVLSLDF-LP-Y--------PVR--PVSSI----GSFLLLRPINSTILQLVLCNPFTRQFRYLPLL-- 125 (373)
Q Consensus 64 ~~~~~d~~~~~w~~~~~~~-~~-~--------~~~--~~~~~----~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~-- 125 (373)
.++..+....+|..+..+. .+ . ... .++.. .+.+|+.+. ..-++..+-..++|+.+...
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~---~ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS---PQGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE---TTEEEEESSTTSBCEECHHHHT
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec---CCcEEEEcCCCCCeEECcCccC
Confidence 5666666677898875321 11 1 011 23332 577887654 34688888888889887432
Q ss_pred -CC-----------CCCCCeE-EEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccc
Q 046684 126 -NV-----------SRTNPAV-GIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEF 192 (373)
Q Consensus 126 -~~-----------~~~~~~~-~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~ 192 (373)
|. ......+ .+..++.. . ..||+.... ..++..+-...+|+.+...+...
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~-~-----~~l~vg~~~-----------ggl~~s~DgG~tW~~~~~~~~~~ 221 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRD-P-----KHLYIGMSS-----------GGVFESTDAGTDWKPLNRGCAAN 221 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTC-T-----TCEEEEEET-----------BEEEEESSTTSSCEECCTTCCCT
T ss_pred CccccccccccccCCCCCCceeEEEECCCC-C-----CEEEEEECC-----------CCEEEECCCCCCceECCCCcccc
Confidence 11 0011122 22222211 1 557765322 13666666678899875321000
Q ss_pred cccce----eccCCceEEE-C--CEEEEEEcCCceEEEEEECCCCcEEecccCCCCC--CCceeEEEE---CCEEEEEEe
Q 046684 193 AVRLT----VWTPNESVCT-R--GMLYWITSARAYSVIGFDIESNTWRELSAPMADR--LEFATLVSR---NQKLTLIGG 260 (373)
Q Consensus 193 ~~~~~----~~~~~~~~~~-~--g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~~--~~~~~~~~~---~g~l~~~gg 260 (373)
..|.. ....+.++.. + +.+|+.. ...|+..+-..++|+.+...+|.. .....++.. .+.||+...
T Consensus 222 ~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 222 FLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp TSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TTEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred ccCCCccccCcceeEEEECCCCCCEEEEEc---CCeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 00000 0011122222 1 5677653 245888888889999984334432 222334332 467877642
Q ss_pred ec---------CCceEEEEeecCCCCCCeEEEEe-echhhhhhhcCCCCCCCceEEEec-CCEEEEEEcCCccEEEEEcc
Q 046684 261 TC---------GGDACVWELSEGGDDDIWCLIEK-VPIEMGMRLSGGKASWGGTRCAAG-NGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 261 ~~---------~~~~~i~~~~~~~~~~~W~~v~~-~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd~~ 329 (373)
.. +....+|.-.+ ...+|+.+.. +|..... ... .+....+... .+.||+ +.....++.-+-.
T Consensus 299 ~~~~~w~~~~~~~~~~~~~S~D--gG~tW~~~~~glp~~~~~--~~~--~~~~~~~~p~~~~~l~~-g~~~g~l~~S~D~ 371 (394)
T 3b7f_A 299 DGSDVWPRVSPGGKPAVYVTRD--AGESWQRQDRGLPTDQAW--LTV--KRQAMTADAHAPVGVYF-GTTGGEIWASADE 371 (394)
T ss_dssp BCCSSTTCCBCCSSCCEEEESS--TTSCCEEECBTSCCSSCC--CCC--CTBSEEECCSSSCCEEE-ECTTSCEEEESST
T ss_pred cCCccceeecCCCceeEEEECC--CCCCceECCCCCCCcccc--ceE--EEEEEEECCCCCCEEEE-EeCCCeEEEECCC
Confidence 11 11235787765 5678998864 4432100 000 0001222212 355776 3333346655555
Q ss_pred ccCCcccEEEec
Q 046684 330 EDKRKWEWVWVG 341 (373)
Q Consensus 330 ~~~~~~~W~~~~ 341 (373)
.. +|+.+.
T Consensus 372 --G~--tW~~~~ 379 (394)
T 3b7f_A 372 --GE--HWQCIA 379 (394)
T ss_dssp --TS--BCEEEE
T ss_pred --CC--CceEcc
Confidence 66 899875
No 324
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=40.13 E-value=1.3e+02 Score=23.44 Aligned_cols=110 Identities=13% Similarity=0.198 Sum_probs=59.4
Q ss_pred CceEEECCEEEEEEcCCceEEEEEECCCC--cEE--eccc---CCCCCCCceeEEEE--CCEEEEEEeecCCceEEEEee
Q 046684 202 NESVCTRGMLYWITSARAYSVIGFDIESN--TWR--ELSA---PMADRLEFATLVSR--NQKLTLIGGTCGGDACVWELS 272 (373)
Q Consensus 202 ~~~~~~~g~ly~~gg~~~~~i~~yd~~~~--~w~--~~~~---~~p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~ 272 (373)
.+++..+|++|++-| ...+.++.... ... .+.. .+|.... .+... ++++|++.|. ..|.++
T Consensus 10 DAi~~~~g~~yfFkg---~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~ID--Aa~~~~~~~~~yfFkG~-----~yw~~~ 79 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD---GKYWRFSEGRGSRPQGPFLIADKWPALPRKLD--SVFEEPLSKKLFFFSGR-----QVWVYT 79 (195)
T ss_dssp SEEEEETTEEEEEET---TEEEEECCSSSCCCEEEEEHHHHCTTSCSSCS--EEEECTTTCCEEEEETT-----EEEEEE
T ss_pred CEEEEeCCEEEEEEC---CEEEEEECCccccCCCcEEhhhccCCCCCCcc--EEEEECCCCeEEEEeCC-----EEEEEc
Confidence 445668999999954 46777776542 221 1100 1222211 22222 6889999763 588887
Q ss_pred cCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEccccCC
Q 046684 273 EGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 273 ~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
. .+ +.. |.....--.+........++...++++|++.|. ..+.||.. ++
T Consensus 80 ~----~~---~~~-Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~--~ywr~d~~--~~ 128 (195)
T 1itv_A 80 G----AS---VLG-PRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR--RLWRFDVK--AQ 128 (195)
T ss_dssp T----TE---EEE-EEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT--EEEEEETT--TT
T ss_pred C----Cc---cCC-CEEeeecccCCCccceeEEEEcCCCeEEEEeCC--EEEEEeCC--cc
Confidence 5 22 222 433321111110001123334457899999876 59999988 65
No 325
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=38.25 E-value=1.5e+02 Score=23.63 Aligned_cols=101 Identities=8% Similarity=0.048 Sum_probs=54.5
Q ss_pred eCcEEEEeeCCCCceEEEEEcCccc---------ceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCC
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTR---------QFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPR 163 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~---------~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~ 163 (373)
.+|.+|++-| ..++.++.... .|..| |. ..-+++..+ +++|++-|.
T Consensus 27 ~~g~~yfFkg----~~~Wr~~~~~~~~~p~~Is~~wpgL---P~---~IDAA~~~~----------~~~yfFkG~----- 81 (219)
T 1hxn_A 27 NHGATYVFSG----SHYWRLDTNRDGWHSWPIAHQWPQG---PS---TVDAAFSWE----------DKLYLIQDT----- 81 (219)
T ss_dssp TTSCEEEEET----TEEEESSSSSCTTCCEEGGGTCTTS---CS---SCSEEEEET----------TEEEEEETT-----
T ss_pred CCCcEEEEeC----CEEEEEcCCCCCCCceEhhhhccCC---CC---CccEEEEEC----------CcEEEecCC-----
Confidence 5888898887 56777765432 23222 22 122222221 899999764
Q ss_pred CCCcccceEEEEECCCCceeeecCCCcccc----ccce-eccCCceEEE---CCEEEEEEcCCceEEEEEECCC
Q 046684 164 GGATYESMVEMYDSRHDAWQIIGSMPVEFA----VRLT-VWTPNESVCT---RGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 164 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~----~~~~-~~~~~~~~~~---~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
.+++|+..++ .+.....|.... +|.. ......+|+. +|++|++-| ...+.||..+
T Consensus 82 -------~yw~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG---~~ywr~d~~~ 144 (219)
T 1hxn_A 82 -------KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG---RRLWWLDLKS 144 (219)
T ss_dssp -------EEEEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET---TEEEEEEGGG
T ss_pred -------EEEEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC---CEEEEEeCCC
Confidence 3789987542 233333343211 1111 0112333442 589999954 4678999765
No 326
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=35.40 E-value=1e+02 Score=21.76 Aligned_cols=36 Identities=11% Similarity=0.031 Sum_probs=20.7
Q ss_pred eEEEEEcCcccceeccCCCCCCCCCCeEEEEEcCCCCC
Q 046684 107 LQLVLCNPFTRQFRYLPLLNVSRTNPAVGIVMEGPAQH 144 (373)
Q Consensus 107 ~~~~v~np~t~~w~~lp~~~~~~~~~~~~~~~~~~~~~ 144 (373)
..++.+||.+++|.+... ....-..++++.+...++
T Consensus 11 A~V~~~d~~~~~W~p~~~--g~~gvs~V~~~~d~~~~~ 46 (115)
T 1egx_A 11 ATVMLYDDGNKRWLPAGT--GPQAFSRVQIYHNPTANS 46 (115)
T ss_dssp EECBEECTTTSSCCBSSC--SCCCCEEEEEEEETTTTE
T ss_pred EEEEEEcCCCCceeECCC--CCCCccEEEEEEeCCCCE
Confidence 467899999999964322 111222455666544443
No 327
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=35.31 E-value=2.2e+02 Score=24.54 Aligned_cols=217 Identities=12% Similarity=0.005 Sum_probs=105.0
Q ss_pred eeEEEEeCCCCCccccCCCC-----CCC-CceeEEe----eCcEEEEeeCC-----------CCceEEEEEcCc---ccc
Q 046684 63 LCCYVHNPVSDKWHVLSLDF-----LPY-PVRPVSS----IGSFLLLRPIN-----------STILQLVLCNPF---TRQ 118 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~-----~~~-~~~~~~~----~~g~l~~~gg~-----------~~~~~~~v~np~---t~~ 118 (373)
..+..+|+..+.-..+..+. .+. ...++.. -.|.|++.... .....+..||+. |++
T Consensus 35 g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~ 114 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSK 114 (334)
T ss_dssp TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCC
T ss_pred CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCC
Confidence 57777999866443332221 111 1134555 35777774210 124679999988 665
Q ss_pred eec---cCCCCCC-------CCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccceEEEEECCCCc---eeee
Q 046684 119 FRY---LPLLNVS-------RTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSRHDA---WQII 185 (373)
Q Consensus 119 w~~---lp~~~~~-------~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~---W~~~ 185 (373)
-.. |+..... ......-+..+.. +.+|+.+... ...++.+++.... |-..
T Consensus 115 ~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~--------GnaYVt~s~~---------~~~I~rV~pdG~~~~~~~~~ 177 (334)
T 2p9w_A 115 PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD--------GNSYVAFALG---------MPAIARVSADGKTVSTFAWE 177 (334)
T ss_dssp CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT--------SCEEEEEEES---------SCEEEEECTTSCCEEEEEEC
T ss_pred EEEEecCccccccccccccccccCCceeEECCC--------CCEEEeCCCC---------CCeEEEEeCCCCEEeeeeec
Confidence 322 3221111 2222223333322 7789976432 1457888886542 4321
Q ss_pred cCCCccccccceeccCCceEEE-CCEEEEEEcCCceEEEEEECCCCcEEecccCCC-----CCCC-ceeE-E-EECCEEE
Q 046684 186 GSMPVEFAVRLTVWTPNESVCT-RGMLYWITSARAYSVIGFDIESNTWRELSAPMA-----DRLE-FATL-V-SRNQKLT 256 (373)
Q Consensus 186 ~~~p~~~~~~~~~~~~~~~~~~-~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p-----~~~~-~~~~-~-~~~g~l~ 256 (373)
.+.+ ........+++. +|.+.++... ...+.+||+.+.....+ +.. .... .-.+ . ..+|++.
T Consensus 178 ~~~~------~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v--~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 178 SGNG------GQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPE--PVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp CCCS------SSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCE--ECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred CCCc------ccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceee--cccccCCcccccCcccccccccCCEEE
Confidence 1110 122233345555 4654444344 78899999884321112 111 0111 1222 2 2689997
Q ss_pred EEEeecCCceEEEEeecCCCCCCeEEEEe---echhhhhhhcCCCCCCCceEEEe----cCCEEEEEEcC
Q 046684 257 LIGGTCGGDACVWELSEGGDDDIWCLIEK---VPIEMGMRLSGGKASWGGTRCAA----GNGAICLYREV 319 (373)
Q Consensus 257 ~~gg~~~~~~~i~~~~~~~~~~~W~~v~~---~p~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~ 319 (373)
++..... .++.+.. . +.|..... .|.+.- ..+ ....+. .++.||++...
T Consensus 249 lV~~~~~---~~~~l~S--~-DgW~sa~~~g~~~~~~~---~~g-----~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 249 LVGARAP---YAISFRS--W-DNWKSANIKKTKRSELQ---NSG-----FTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEETT---EEEEEEC--S-STTSEEEEEEEECGGGG---SSC-----EEEEEEEEETTEEEEEEEECC
T ss_pred EEEcCCC---CEEEEEC--C-CCcceeEEeeeecCccc---cCc-----eeEEEEeccccCCeEEEEeee
Confidence 7765432 2455554 2 34976554 443211 111 122223 68999998743
No 328
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=34.90 E-value=2.1e+02 Score=24.19 Aligned_cols=120 Identities=8% Similarity=0.029 Sum_probs=59.9
Q ss_pred CCEEEEEEcCC-c--eEEEEEECCCCcEEecccCCC---CCCCce-eEEEE-CCEEEEEEeec----CCceEEEEeecCC
Q 046684 208 RGMLYWITSAR-A--YSVIGFDIESNTWRELSAPMA---DRLEFA-TLVSR-NQKLTLIGGTC----GGDACVWELSEGG 275 (373)
Q Consensus 208 ~g~ly~~gg~~-~--~~i~~yd~~~~~w~~~~~~~p---~~~~~~-~~~~~-~g~l~~~gg~~----~~~~~i~~~~~~~ 275 (373)
+|++|+..... . ..|..+| +++....+.... ...... +++.- +|+||++.... ...+.+|+++.
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t-- 102 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN-- 102 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT--
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC--
Confidence 68888874221 1 3677777 444332210000 111222 23332 58999987431 23356666643
Q ss_pred CCCCeEEEEeechhhhhhhcCCCCCCCceEEEe-cCCEEEEEEc---CCccEEEEEccccCCcccEEEec
Q 046684 276 DDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAA-GNGAICLYRE---VGLGMIIWREDEDKRKWEWVWVG 341 (373)
Q Consensus 276 ~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~---~~~~~~~yd~~~~~~~~~W~~~~ 341 (373)
++-.....++...... .....-.++. .++.+|+.+. ....+.+||++ +++ .|+.+.
T Consensus 103 --g~~~~~~~~~~~~~~~-----~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~--~g~-~~r~~~ 162 (343)
T 2qe8_A 103 --NQLSRVIYLPPPITLS-----NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ--TGL-AARVLQ 162 (343)
T ss_dssp --TEEEEEEECCTTTSCT-----TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT--TCC-EEEECT
T ss_pred --CeEEEEEECChhhccc-----ccccceEEEecCCCEEEEEcCccCCCCeEEEEECC--CCC-EEEEec
Confidence 5433333444322110 0000122233 3689999876 66789999998 661 355553
No 329
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=32.97 E-value=3.2e+02 Score=25.78 Aligned_cols=57 Identities=7% Similarity=-0.145 Sum_probs=31.2
Q ss_pred eeEEEEeCCCCCccccCCCCCC--CCceeEEeeCc-EEEEeeCCCCceEEEEEcCcccceeccC
Q 046684 63 LCCYVHNPVSDKWHVLSLDFLP--YPVRPVSSIGS-FLLLRPINSTILQLVLCNPFTRQFRYLP 123 (373)
Q Consensus 63 ~~~~~~d~~~~~w~~~~~~~~~--~~~~~~~~~~g-~l~~~gg~~~~~~~~v~np~t~~w~~lp 123 (373)
..++.+|..+.+...+...... ......-+-+| .|..... ..++++|..+++.+++.
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSSSSCCEEEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECCCCceEEEe
Confidence 5677788877665444322211 11122234455 3443332 57999999888766553
No 330
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=31.95 E-value=1.1e+02 Score=21.82 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=25.0
Q ss_pred ceEEEEEcCccc-ceeccCCCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEe
Q 046684 106 ILQLVLCNPFTR-QFRYLPLLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAG 156 (373)
Q Consensus 106 ~~~~~v~np~t~-~w~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~g 156 (373)
...++.|||.|+ .|.+..... ..++++.+...++ ++|+-+.
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~~-----~~V~~~~d~~~~~-----yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKHA-----VTVSYFYDSTRNV-----YRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSSC-----EEEEEEEETTTTE-----EEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCCc-----eEEEEEEcCCCCE-----EEEEEcc
Confidence 357899999996 997644321 2445555544444 6665543
No 331
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=30.79 E-value=1.4e+02 Score=26.09 Aligned_cols=66 Identities=3% Similarity=-0.162 Sum_probs=41.8
Q ss_pred CEEEEEEeecCCce-EEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEc---------CCcc
Q 046684 253 QKLTLIGGTCGGDA-CVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYRE---------VGLG 322 (373)
Q Consensus 253 g~l~~~gg~~~~~~-~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~ 322 (373)
.++|+.....+.-. .++.++. .+++.+..++..... +......+..+|+.+. ..+.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~----~t~~v~~~i~vG~~P----------~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCA----GCGVTLGHSLGAFLS----------LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEET----TTTEEEEEEEECTTC----------EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CeEEEECCccCCccceEEEEEC----CCCeEEEEEeCCCCC----------ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 56777764332111 5666655 778899888865421 2333335778999862 3457
Q ss_pred EEEEEccccCCc
Q 046684 323 MIIWREDEDKRK 334 (373)
Q Consensus 323 ~~~yd~~~~~~~ 334 (373)
+.++|+. +.+
T Consensus 98 VsviD~~--T~~ 107 (368)
T 1mda_H 98 VEVFDPV--TFL 107 (368)
T ss_dssp EEEECTT--TCC
T ss_pred EEEEECC--CCC
Confidence 9999999 773
No 332
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=30.42 E-value=2.2e+02 Score=23.23 Aligned_cols=156 Identities=8% Similarity=0.032 Sum_probs=82.1
Q ss_pred eEEEEEeccCCCCCCCCcccceEEEEECCCCceeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCC
Q 046684 150 FRIYVAGGMSDEPRGGATYESMVEMYDSRHDAWQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIES 229 (373)
Q Consensus 150 ~kl~~~gg~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~ 229 (373)
+++|++.... ..+..+|.....++.++--. ......+++.++..|++.......+..|+...
T Consensus 39 ~~L~aV~d~~----------~~I~~ld~~g~v~~~i~l~g--------~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 39 NTLFSTINKP----------AAIVEMTTNGDLIRTIPLDF--------VKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TEEEEEEETT----------EEEEEEETTCCEEEEEECSS--------CSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEECCC----------CeEEEEeCCCCEEEEEecCC--------CCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 7899987443 56889999866677663210 01112234444334545445567788888765
Q ss_pred Cc--E--EecccCC---CCCCCceeEEEE--CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCC
Q 046684 230 NT--W--RELSAPM---ADRLEFATLVSR--NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKAS 300 (373)
Q Consensus 230 ~~--w--~~~~~~~---p~~~~~~~~~~~--~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~ 300 (373)
+. + .....++ +.....-+++.- +++||++.... ...+|.++....+..-+.. ..+.-....... .
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~g~~~~~~l~i~-~~~~~~~~~~~~---d 174 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVNGLLSSNELHIS-KDKALQRQFTLD---D 174 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEESTTCSSCCEEE-ECHHHHHTCCSS---C
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEcccccCCceeee-cchhhccccccC---C
Confidence 44 3 2221121 222333455553 55899976443 2467777620011211221 111100000111 1
Q ss_pred CCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 301 WGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 301 ~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
.+....-...+.+|+....+..++.+|.+
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 22344444578999999999999999998
No 333
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.84 E-value=4.3e+02 Score=25.40 Aligned_cols=240 Identities=12% Similarity=0.082 Sum_probs=115.2
Q ss_pred CCCccccCCCCCC-CCceeEEe--e-CcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCC--CCCeE-EEEEcCCCCC
Q 046684 72 SDKWHVLSLDFLP-YPVRPVSS--I-GSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSR--TNPAV-GIVMEGPAQH 144 (373)
Q Consensus 72 ~~~w~~~~~~~~~-~~~~~~~~--~-~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~--~~~~~-~~~~~~~~~~ 144 (373)
...|..+.+.... +-. .++. . .+.+|+... ...++..+-.-++|+++.+.+... ....+ .+..++...
T Consensus 10 ~~~w~~~~~~~~~g~i~-~i~~~p~~~~~~~~~~~---~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~- 84 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMP-GIVFNETEKDLIYARAA---IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDP- 84 (737)
T ss_dssp CEEEEEECCCSBCSCCC-EEEECSSSTTCEEEECS---SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSST-
T ss_pred CCeeEEcccCCCcceee-EEEECCCCCCEEEEEec---CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCC-
Confidence 3467777543322 222 2222 2 267887553 245888888888999876532211 11222 222233221
Q ss_pred CCCCceEEEEEeccCCCCCCCCcccceEEEEECC--CCceeeecCCCccccccceec-cCCceEEE---CCEEEEEEcCC
Q 046684 145 GPFPNFRIYVAGGMSDEPRGGATYESMVEMYDSR--HDAWQIIGSMPVEFAVRLTVW-TPNESVCT---RGMLYWITSAR 218 (373)
Q Consensus 145 ~~~~~~kl~~~gg~~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~~~~~~~~~-~~~~~~~~---~g~ly~~gg~~ 218 (373)
+.||+..+... .........+|-+. ..+|+.+..... .......+ .....++. .+.+|+.. ..
T Consensus 85 -----~~v~v~~~~~~----~~~~~~~~~l~~S~DgG~TW~~~~~~~~-~~~~~~g~~~~~~l~~~p~~~~~v~~g~-~~ 153 (737)
T 2cn3_A 85 -----NRVYIVAGMYT----NDWLPNMGAILRSTDRGETWEKTILPFK-MGGNMPGRSMGERLAIDPNDNRILYLGT-RC 153 (737)
T ss_dssp -----TCEEEEECSCS----SSSSCCCCEEEEESSSSSSCEEEECSSC-CCTTSTTTTSCCCEEECSSCTTCEEEEC-ST
T ss_pred -----CEEEEEecccc----cccccCCccEEEeCCCCCCcccCCCCcc-cCCCcCcccccceEEECCCCCCEEEEee-cc
Confidence 67888754320 00001123444443 467998753210 00000001 11222321 25677652 11
Q ss_pred ceEEEEEECCCCcEEecccCCCCCC--------------CceeEEEEC----------CEEEEEEeecCCceEEEEeecC
Q 046684 219 AYSVIGFDIESNTWRELSAPMADRL--------------EFATLVSRN----------QKLTLIGGTCGGDACVWELSEG 274 (373)
Q Consensus 219 ~~~i~~yd~~~~~w~~~~~~~p~~~--------------~~~~~~~~~----------g~l~~~gg~~~~~~~i~~~~~~ 274 (373)
...++.=+=.-.+|+.+ ..+|... .+...+.++ +.||+....... .+|.-.+
T Consensus 154 g~gl~~S~DgG~tW~~~-~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~--~v~~S~D- 229 (737)
T 2cn3_A 154 GNGLWRSTDYGVTWSKV-ESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNE--SIYRSTD- 229 (737)
T ss_dssp TCCEEEESSTTSSCEEC-TTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSC--CEEEESS-
T ss_pred CCcEEEeCCCCcceecc-cCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCc--cEEEEcC-
Confidence 13343222234589988 3333210 112223332 266665432221 3777766
Q ss_pred CCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEEc---------CCccEEEEEccccCCcccEEEeccccc
Q 046684 275 GDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYRE---------VGLGMIIWREDEDKRKWEWVWVGGCCL 345 (373)
Q Consensus 275 ~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~yd~~~~~~~~~W~~~~~~~~ 345 (373)
...+|+.+..+|...+. ...+...++.+|+..+ ....++.++-. .. +|+.+...|.
T Consensus 230 -gG~tW~~~~~~p~~~~~----------~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~--G~--tW~~i~~~~~ 294 (737)
T 2cn3_A 230 -GGVTWKAVPGQPKGLLP----------HHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTR--TG--EWIDITPIPY 294 (737)
T ss_dssp -TTSCCEECTTCCCSSEE----------EEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETT--TC--CEEECCSSCT
T ss_pred -CCCceEECCCCCCcccc----------eEEEECCCCeEEEEecCCCCccccccCceEEEEeCC--CC--CEEEccCCCC
Confidence 56789988755542211 1122223778887642 33468888888 88 9999876554
Q ss_pred C
Q 046684 346 T 346 (373)
Q Consensus 346 ~ 346 (373)
.
T Consensus 295 ~ 295 (737)
T 2cn3_A 295 S 295 (737)
T ss_dssp T
T ss_pred C
Confidence 3
No 334
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=26.27 E-value=4.2e+02 Score=25.00 Aligned_cols=225 Identities=7% Similarity=-0.142 Sum_probs=0.0
Q ss_pred eeEEEEeCCCCCc---cccCCCCCCCCceeEEeeCcEEEEeeCCCCceEEEEEcCcccceeccCCCCCCC----------
Q 046684 63 LCCYVHNPVSDKW---HVLSLDFLPYPVRPVSSIGSFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVSR---------- 129 (373)
Q Consensus 63 ~~~~~~d~~~~~w---~~~~~~~~~~~~~~~~~~~g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~~---------- 129 (373)
..++.+|..+++. .+++ .......-+-+|..+.+.. ...++++|..+++-+++..-....
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v 162 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWV 162 (719)
T ss_dssp EEEEEEETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHH
T ss_pred eEEEEEECCCCccccceecC----cccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccccce
Q ss_pred ------CCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCc-----------------------------ccceEEE
Q 046684 130 ------TNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGAT-----------------------------YESMVEM 174 (373)
Q Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~-----------------------------~~~~~~~ 174 (373)
..........+ ++.++++..+ ... ....+++
T Consensus 163 ~~ee~~~~~~~~~wSPD---------G~~la~~~~d-----~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 163 YEEEMLATKYALWWSPN---------GKFLAYAEFN-----DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp HHHHTTCSSCCEEECTT---------SSEEEEEEEE-----CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred eeeecccCcccEEECCC---------CCEEEEEEEC-----CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Q ss_pred EECCCCc---eeeecC-----CCccccccceeccCCceEEECCEEEEEE---cCCceEEEEEE----CCCCcEEecc---
Q 046684 175 YDSRHDA---WQIIGS-----MPVEFAVRLTVWTPNESVCTRGMLYWIT---SARAYSVIGFD----IESNTWRELS--- 236 (373)
Q Consensus 175 yd~~~~~---W~~~~~-----~p~~~~~~~~~~~~~~~~~~~g~ly~~g---g~~~~~i~~yd----~~~~~w~~~~--- 236 (373)
+|..+++ |..+.. - ...........-+|++.+.. +.....|..+| +.+++...+-
T Consensus 229 ~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~ 301 (719)
T 1z68_A 229 IDTTYPAYVGPQEVPVPAMIAS-------SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI 301 (719)
T ss_dssp EESSCHHHHCCEECCCCHHHHT-------SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE
T ss_pred EECCCCCccceeEccCCccCCC-------CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc
Q ss_pred -cCCCCCCC-----ceeEEEECCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhhhhhhcCCCCCCCceEEEecC
Q 046684 237 -APMADRLE-----FATLVSRNQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEMGMRLSGGKASWGGTRCAAGN 310 (373)
Q Consensus 237 -~~~p~~~~-----~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
........ .....--+..|+++.........+|..+. ++.....+..-...... .... .+
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~--~~~~~~~lt~~~~~v~~-----------~~~~-d~ 367 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD--TVENAIQITSGKWEAIN-----------IFRV-TQ 367 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS--CSTTCEECSCSSSCEEE-----------EEEE-CS
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC--CCCceEecccCceEEEE-----------EEEE-eC
Q ss_pred CEEEEEEcC----CccEEEEEcc
Q 046684 311 GAICLYREV----GLGMIIWRED 329 (373)
Q Consensus 311 ~~i~~~~~~----~~~~~~yd~~ 329 (373)
+.|++.... .....+|...
T Consensus 368 ~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 368 DSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SEEEEEESCGGGCTTCBEEEEEE
T ss_pred CEEEEEEecCCCCCceEEEEEEe
No 335
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=25.76 E-value=4.2e+02 Score=24.87 Aligned_cols=144 Identities=10% Similarity=-0.028 Sum_probs=69.4
Q ss_pred eeCcEEEEeeCCCCceEEEEEcCcccce-----eccCCCCCCC---CCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCC
Q 046684 92 SIGSFLLLRPINSTILQLVLCNPFTRQF-----RYLPLLNVSR---TNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPR 163 (373)
Q Consensus 92 ~~~g~l~~~gg~~~~~~~~v~np~t~~w-----~~lp~~~~~~---~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~ 163 (373)
+.+|..+..++. ...+.+||..++.- ..+..+.... ...-..+...+ ++ ++.++.+
T Consensus 138 SPDG~~LAsgs~--DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP--------dg--Laass~D---- 201 (588)
T 2j04_A 138 NPIESSIVVGNE--DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE--------DV--LVAALSN---- 201 (588)
T ss_dssp CSSSSCEEEEET--TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET--------TE--EEEEETT----
T ss_pred cCCCCEEEEEcC--CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC--------Cc--EEEEeCC----
Confidence 456665555554 57899999988742 1112221111 11111111111 15 4455443
Q ss_pred CCCcccceEEEEECCCCc----eeeecCCCccccccceeccCCceEEECCEEEEEEcCCceEEEEEECCCCcEEecccCC
Q 046684 164 GGATYESMVEMYDSRHDA----WQIIGSMPVEFAVRLTVWTPNESVCTRGMLYWITSARAYSVIGFDIESNTWRELSAPM 239 (373)
Q Consensus 164 ~~~~~~~~~~~yd~~~~~----W~~~~~~p~~~~~~~~~~~~~~~~~~~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~ 239 (373)
..+.++|..++. |+.+... + ...-..+++. |...+.++ .+.|..+|..+++-... ..
T Consensus 202 ------~tVrlWd~~~~~~~~~~~tL~~~-------h-~~~V~svaFs-g~~LASa~--~~tIkLWd~~~~~~~~~-~~- 262 (588)
T 2j04_A 202 ------NSVFSMTVSASSHQPVSRMIQNA-------S-RRKITDLKIV-DYKVVLTC--PGYVHKIDLKNYSISSL-KT- 262 (588)
T ss_dssp ------CCEEEECCCSSSSCCCEEEEECC-------C-SSCCCCEEEE-TTEEEEEC--SSEEEEEETTTTEEEEE-EC-
T ss_pred ------CeEEEEECCCCccccceeeeccc-------c-cCcEEEEEEE-CCEEEEEe--CCeEEEEECCCCeEEEE-Ec-
Confidence 467888887655 3333211 1 1122334445 44444433 37899999998877554 11
Q ss_pred CCCCCceeEEE--E-CCEEEEEEeecCCceEEEEee
Q 046684 240 ADRLEFATLVS--R-NQKLTLIGGTCGGDACVWELS 272 (373)
Q Consensus 240 p~~~~~~~~~~--~-~g~l~~~gg~~~~~~~i~~~~ 272 (373)
........++. . ++...++++.+ .. .+|.++
T Consensus 263 gh~~~V~~va~~~s~d~~~La~a~ed-G~-klw~~d 296 (588)
T 2j04_A 263 GSLENFHIIPLNHEKESTILLMSNKT-SY-KVLLED 296 (588)
T ss_dssp SCCSCCCEEEETTCSSCEEEEECSSC-EE-EEEESS
T ss_pred CCCceEEEEEeeeCCCCCEEEEEcCC-CC-EEEeec
Confidence 22111222333 2 44455554433 33 688874
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=24.43 E-value=2.7e+02 Score=22.50 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=46.3
Q ss_pred CCEEEEEEcCCceEEEEEECCC---CcEEecccCCCC-CC--CceeEEEECCEEEEEEeecCCceEEEEeecC-CCCCCe
Q 046684 208 RGMLYWITSARAYSVIGFDIES---NTWRELSAPMAD-RL--EFATLVSRNQKLTLIGGTCGGDACVWELSEG-GDDDIW 280 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~---~~w~~~~~~~p~-~~--~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~~-~~~~~W 280 (373)
+|.||.+ ....++..++.+ +.|......... .- .....+..+|.||++ .++ .||..+.. ...+.|
T Consensus 51 ~G~LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG---~iyr~~pP~~~~~~W 122 (236)
T 1tl2_A 51 GGELYGV---LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKD---KLYKASPPQSDTDNW 122 (236)
T ss_dssp TSCEEEE---ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETT---EEEEESCCCSTTCCH
T ss_pred CccEEEE---eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCC---EEEEeCCCcCCCCce
Confidence 7899998 345788888855 233222000000 11 122233347889988 232 45554431 255678
Q ss_pred ----EEEEeechhhhhhhcCCCCCCCceEEEecCCEEEEEE
Q 046684 281 ----CLIEKVPIEMGMRLSGGKASWGGTRCAAGNGAICLYR 317 (373)
Q Consensus 281 ----~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
++|..-.-..+ ...++..++.||.+.
T Consensus 123 l~~a~~vg~~gw~~~-----------~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 123 IARATEVGSGGWSGF-----------KFLFFHPNGYLYAVH 152 (236)
T ss_dssp HHHSEEEECSSGGGE-----------EEEEECTTSCEEEEE
T ss_pred eccccEeccCCCCce-----------EEEEECCCceEEEEe
Confidence 45544222222 144455567777776
No 337
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=24.18 E-value=3.9e+02 Score=23.99 Aligned_cols=58 Identities=9% Similarity=0.204 Sum_probs=34.4
Q ss_pred CCEEEEEEcCCceEEEEEECCCCcEEe-----cccCCCC-CCCceeEEEECCEEEEEEeecCCceEEEEeec
Q 046684 208 RGMLYWITSARAYSVIGFDIESNTWRE-----LSAPMAD-RLEFATLVSRNQKLTLIGGTCGGDACVWELSE 273 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~w~~-----~~~~~p~-~~~~~~~~~~~g~l~~~gg~~~~~~~i~~~~~ 273 (373)
+|++|++-| ...+.||..+++-.. +....|. ...--.++..+|++|++.|. ..|.+++
T Consensus 367 ~~k~yfFkG---~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg~-----~ywr~d~ 430 (450)
T 1su3_A 367 TGKTYFFVA---NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGT-----RQYKFDP 430 (450)
T ss_dssp TTEEEEEET---TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEETT-----EEEEEET
T ss_pred CCeEEEEeC---CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeCC-----EEEEEEC
Confidence 589999954 589999987543221 1000111 11111234468999999763 5888887
No 338
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.06 E-value=3.7e+02 Score=23.59 Aligned_cols=84 Identities=12% Similarity=0.161 Sum_probs=46.2
Q ss_pred eEEEEEe-ccCCCCCCC-C---cccceEEEEECCCC--ceeeecCCCccccccceeccCCceEEE---------CCEEEE
Q 046684 150 FRIYVAG-GMSDEPRGG-A---TYESMVEMYDSRHD--AWQIIGSMPVEFAVRLTVWTPNESVCT---------RGMLYW 213 (373)
Q Consensus 150 ~kl~~~g-g~~~~~~~~-~---~~~~~~~~yd~~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~---------~g~ly~ 213 (373)
++++++- |.-...... . .....+.+||..++ +=-..-.+|.+... ....-...++- ++.+|+
T Consensus 98 ~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~--~~S~l~di~VD~~~~~~~c~~~~aYI 175 (381)
T 3q6k_A 98 RRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVE--KPTYFGGFAVDVANPKGDCSETFVYI 175 (381)
T ss_dssp CEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCC--CGGGEEEEEEEESCTTTTSCSEEEEE
T ss_pred CcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcc--cCCccceEEEecccCCCCCCccEEEE
Confidence 8899984 322000000 1 23458999999999 54333334432111 11111222222 467887
Q ss_pred EEcCCceEEEEEECCCC-cEEecc
Q 046684 214 ITSARAYSVIGFDIESN-TWRELS 236 (373)
Q Consensus 214 ~gg~~~~~i~~yd~~~~-~w~~~~ 236 (373)
.- .....|++||.+++ .|+...
T Consensus 176 tD-~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 176 TN-FLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp EE-TTTTEEEEEETTTTEEEEEEC
T ss_pred Ec-CCCCcEEEEECCCCcEEEEcc
Confidence 74 34679999999976 687763
No 339
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=23.19 E-value=49 Score=22.78 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=20.9
Q ss_pred CCCcchHHHHHHHHhcCChhhHHHh
Q 046684 1 MWSNLHLDVLANIFSFLSPDSLARA 25 (373)
Q Consensus 1 ~~~~Lp~dll~~Il~rLP~~~l~r~ 25 (373)
|+..+|++.+++|..++++.+++.-
T Consensus 1 m~~~~~~~~i~~ik~~~~i~~v~~~ 25 (103)
T 1d0q_A 1 MGHRIPEETIEAIRRGVDIVDVIGE 25 (103)
T ss_dssp -CTTSCHHHHHHHHHHCCHHHHHTT
T ss_pred CCCcCCHHHHHHHHHcCCHHHHHHH
Confidence 3567899999999999999998763
No 340
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=22.99 E-value=2.7e+02 Score=21.63 Aligned_cols=107 Identities=7% Similarity=-0.042 Sum_probs=56.1
Q ss_pred eCcEEEEeeCCCCceEEEEEcCcccce---eccC----CCCCCCCCCeEEEEEcCCCCCCCCCceEEEEEeccCCCCCCC
Q 046684 93 IGSFLLLRPINSTILQLVLCNPFTRQF---RYLP----LLNVSRTNPAVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGG 165 (373)
Q Consensus 93 ~~g~l~~~gg~~~~~~~~v~np~t~~w---~~lp----~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~ 165 (373)
.+|.+|++-| +.++++|..+... +.|. .+|. ....+++.... + +++|.+-|.
T Consensus 60 ~~g~~yfFkg----~~yw~~~~~~~~~gyPk~I~~~~~glP~--~~IDAA~~~~~---~-----g~~yfFkG~------- 118 (196)
T 3c7x_A 60 KDGKFVFFKG----DKHWVFDEASLEPGYPKHIKELGRGLPT--DKIDAALFWMP---N-----GKTYFFRGN------- 118 (196)
T ss_dssp TTSCEEEEET----TEEEEEETTEECTTCSEEGGGTCBSCCS--SCCSEEEEETT---T-----TEEEEEETT-------
T ss_pred CCCcEEEecC----CEEEEEeCCcccCCCCeEhhhcCCCCCC--CcccEEEEEcc---C-----CEEEEEECC-------
Confidence 5788898887 6788888643221 1111 1221 12333443311 1 789988754
Q ss_pred CcccceEEEEECCCCceeeecCCCcccc-ccceeccCCceEE-E-CC-EEEEEEcCCceEEEEEECCCCc
Q 046684 166 ATYESMVEMYDSRHDAWQIIGSMPVEFA-VRLTVWTPNESVC-T-RG-MLYWITSARAYSVIGFDIESNT 231 (373)
Q Consensus 166 ~~~~~~~~~yd~~~~~W~~~~~~p~~~~-~~~~~~~~~~~~~-~-~g-~ly~~gg~~~~~i~~yd~~~~~ 231 (373)
..+.||..+++- ....|.... .+..+. ...+|+ . +| ++|++-| ...+.||..+++
T Consensus 119 -----~yw~yd~~~~~v--~~gyPk~i~~~~gip~-~idaAf~~~~~~~~YfFkg---~~y~r~d~~~~~ 177 (196)
T 3c7x_A 119 -----KYYRFNEELRAV--DSEYPKNIKVWEGIPE-SPRGSFMGSDEVFTYFYKG---NKYWKFNNQKLK 177 (196)
T ss_dssp -----EEEEEETTTTEE--CTTCSEEGGGSBTCCS-SCSEEEECTTSSEEEEEET---TEEEEEETTTTE
T ss_pred -----EEEEEeCCcccc--cCCCCccHHHCCCcCC-CcceeEEecCCCEEEEEEC---CEEEEEECCcce
Confidence 378899876532 122222110 001111 122333 3 44 8999954 578899988765
No 341
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=22.73 E-value=2.9e+02 Score=26.19 Aligned_cols=21 Identities=5% Similarity=0.047 Sum_probs=16.3
Q ss_pred CCEEEEEEcCCceEEEEEECCCCc
Q 046684 208 RGMLYWITSARAYSVIGFDIESNT 231 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~ 231 (373)
+|++|++-| ...+.||..+++
T Consensus 548 ~gktYFFkG---~~ywryd~~~~~ 568 (631)
T 1ck7_A 548 NKKTYIFAG---DKFWRYNEVKKK 568 (631)
T ss_dssp TCEEEEEET---TEEEEEETTTTE
T ss_pred CCeEEEEEC---CEEEEEcCCccc
Confidence 689999954 478899987653
No 342
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.32 E-value=5.7e+02 Score=24.84 Aligned_cols=223 Identities=11% Similarity=0.012 Sum_probs=100.7
Q ss_pred cEEEEeeCCCCceEEEEEcCcccceeccCCCCCC--CCCC-eEEEEEcCCCCCCCCCceEEEEEeccCCCCCCCCcccce
Q 046684 95 SFLLLRPINSTILQLVLCNPFTRQFRYLPLLNVS--RTNP-AVGIVMEGPAQHGPFPNFRIYVAGGMSDEPRGGATYESM 171 (373)
Q Consensus 95 g~l~~~gg~~~~~~~~v~np~t~~w~~lp~~~~~--~~~~-~~~~~~~~~~~~~~~~~~kl~~~gg~~~~~~~~~~~~~~ 171 (373)
+.+|+.+. ..-++.-+-.-++|+++...... .... ...+..++. +. ..+|+..+.. .......
T Consensus 28 ~~~~a~~~---~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~-~~-----~~i~~~~g~~-----~~~~~~~ 93 (789)
T 1sqj_A 28 DLLYARTD---IGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN-NP-----DRLYLAQGRY-----VGDEWAA 93 (789)
T ss_dssp TCEEEEES---SSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT-EE-----EEEEEEECSC-----TTSSCCE
T ss_pred CEEEEEec---CCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCC-CC-----CEEEEEeCcc-----CCCcccE
Confidence 66776543 23466666666789887542210 0111 112222221 11 6688765432 1001122
Q ss_pred EEEEECCCCceeeecCCCccccccceec-cCCceEEE---CCEEEEEEcCCceEEEEEECCCCcEEecccCCCC---CCC
Q 046684 172 VEMYDSRHDAWQIIGSMPVEFAVRLTVW-TPNESVCT---RGMLYWITSARAYSVIGFDIESNTWRELSAPMAD---RLE 244 (373)
Q Consensus 172 ~~~yd~~~~~W~~~~~~p~~~~~~~~~~-~~~~~~~~---~g~ly~~gg~~~~~i~~yd~~~~~w~~~~~~~p~---~~~ 244 (373)
++.=+-...+|+.+.. |....-....+ .....++. .+.+|+. . ....|+.=+=.-++|+.+ ...+. ...
T Consensus 94 v~~S~DgG~TW~~~~~-~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~-~~~gl~~S~DgG~TW~~~-~~~~~~~~~~~ 169 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYES-PFPMGANDMGRNNGERLAVNPFNSNEVWMG-T-RTEGIWKSSDRAKTWTNV-TSIPDAFTNGI 169 (789)
T ss_dssp EEEESSTTSEEEEEEC-SSCCCTTSTTTTSCCCEEEETTEEEEEEEE-C-SSSCEEEESSTTSSCEEE-TTSCCCCSTTT
T ss_pred EEEECCCCCcceeccC-CcccCccCCCccceeEEEEcCCCCCEEEEE-e-ccCCEEEECCCCcccCCC-ccCccccCCCC
Confidence 2222223467998853 11000000011 11223333 3566664 2 223344332234689988 33331 112
Q ss_pred ceeEEEE----CCEEEEEEeecCCceEEEEeecCCCCCCeEEEEeechhh-------hhhhcCCCCCCCceEEEecCCEE
Q 046684 245 FATLVSR----NQKLTLIGGTCGGDACVWELSEGGDDDIWCLIEKVPIEM-------GMRLSGGKASWGGTRCAAGNGAI 313 (373)
Q Consensus 245 ~~~~~~~----~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~v~~~p~~~-------~~~~~~~~~~~~~~~~~~~~~~i 313 (373)
....+.+ .+.||+..... ..+|.-.+ ..++|+.+..++... +......+.......+...++.|
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~~---~~v~~S~D--gG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l 244 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATAP---QGMYVTHD--GGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFL 244 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESST---TCEEEESS--TTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEE
T ss_pred CeEEEEECCCCCCEEEEEEcCC---CeEEEEcC--CCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeE
Confidence 2223332 24666654321 24777766 667899986444321 10000000000011222227888
Q ss_pred EEEE--------cCCccEEEEEccccCCcccEEEecccc
Q 046684 314 CLYR--------EVGLGMIIWREDEDKRKWEWVWVGGCC 344 (373)
Q Consensus 314 ~~~~--------~~~~~~~~yd~~~~~~~~~W~~~~~~~ 344 (373)
|+.. +....++..+-. .. +|+.+...|
T Consensus 245 ~~~~~~~~~p~~g~~g~l~~S~Dg--G~--tW~~~~~~~ 279 (789)
T 1sqj_A 245 YVTYADYPGPWGVTFGEVWRQNRT--SG--AWDDITPRV 279 (789)
T ss_dssp EEEEESSCSSSCCCCCCEEEEETT--TC--CEEECCCCT
T ss_pred EEEEecCCCCCCCCCceEEEEeCC--CC--ceEECcCCC
Confidence 8873 244568888777 77 999987543
No 343
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=21.07 E-value=3.1e+02 Score=21.69 Aligned_cols=109 Identities=7% Similarity=0.076 Sum_probs=55.7
Q ss_pred CCEEEEEEcCCceEEEEEECCCCc---EEeccc-CCCCCCCceeEEE---ECCEEEEEEeecCCceEEEEeecCCCCCCe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNT---WRELSA-PMADRLEFATLVS---RNQKLTLIGGTCGGDACVWELSEGGDDDIW 280 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~---w~~~~~-~~p~~~~~~~~~~---~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W 280 (373)
+|++|++-| ...+.||-.+.. =+.+.. -+|........+. .+|++|++.|. ..|.+++ .++
T Consensus 87 ~~k~yfFkG---~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~-----~ywr~d~--~~~-- 154 (218)
T 1gen_A 87 EEKAVFFAG---NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-----KFWRYNE--VKK-- 154 (218)
T ss_dssp TTEEEEEET---TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT-----EEEEEET--TTT--
T ss_pred CCEEEEEeC---CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC-----EEEEEEC--ccc--
Confidence 589999954 577888842110 011100 1111111222232 36899998763 6888886 222
Q ss_pred EEEEeechhhhhhhcCCCCCCCceEEEec-CCEEEEEEcCCccEEEEEccccCC
Q 046684 281 CLIEKVPIEMGMRLSGGKASWGGTRCAAG-NGAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 281 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+....-|......+.+.... ...+.... ++.+|++.|. ..+.||.. +.
T Consensus 155 ~v~~gyPr~i~~~w~g~p~~-idaAf~~~~~g~~YfFkg~--~y~~~~~~--~~ 203 (218)
T 1gen_A 155 KMDPGFPKLIADAWNAIPDN-LDAVVDLQGGGHSYFFKGA--YYLKLENQ--SL 203 (218)
T ss_dssp EECSSCCEEHHHHSSSCCSS-CSEEEECTTTCEEEEEETT--EEEEEETT--EE
T ss_pred cccCCCCcchhhccCCCCCC-CCEEEEEcCCCcEEEEECC--EEEEEECC--ce
Confidence 22222233332222222111 12333323 4899999877 59999988 66
No 344
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=20.87 E-value=4.3e+02 Score=23.23 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=49.1
Q ss_pred EcCCceEEEEEECCCCc---------EEecccCCCCCCCceeEEEE---CCEEEEEEeecCCceEEEEeecCCCCCCeEE
Q 046684 215 TSARAYSVIGFDIESNT---------WRELSAPMADRLEFATLVSR---NQKLTLIGGTCGGDACVWELSEGGDDDIWCL 282 (373)
Q Consensus 215 gg~~~~~i~~yd~~~~~---------w~~~~~~~p~~~~~~~~~~~---~g~l~~~gg~~~~~~~i~~~~~~~~~~~W~~ 282 (373)
.+.....|..||+.+.. +..+ ..+..+......+.. ++.+++.++. +..+.+|++.. . ..
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~p~~~~~las~s~-Dg~v~iwD~~~----~--~~ 184 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYH-KLLKDAGGMVIDMKWNPTVPSMVAVCLA-DGSIAVLQVTE----T--VK 184 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEE-ECCCSGGGSEEEEEECSSCTTEEEEEET-TSCEEEEEESS----S--EE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeee-eccCCCCCceEEEEECCCCCCEEEEEEC-CCeEEEEEcCC----C--cc
Confidence 35567788899986531 1111 111111112222222 2556665554 44579999975 3 22
Q ss_pred EE-eechhhhhhhcCCCCCCCceEEEecCCEEEEEEcCCccEEEEEcc
Q 046684 283 IE-KVPIEMGMRLSGGKASWGGTRCAAGNGAICLYREVGLGMIIWRED 329 (373)
Q Consensus 283 v~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~yd~~ 329 (373)
+. .......- ...+...++..++.++..+.+.+||++
T Consensus 185 ~~~~~~~~~~v----------~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 185 VCATLPSTVAV----------TSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEECGGGCE----------EEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eeeccCCCCce----------eEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 22 22211100 122223356666777777889999997
No 345
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=20.86 E-value=3e+02 Score=21.35 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=53.9
Q ss_pred CCEEEEEEcCCceEEEEEECCCCc---EEeccc---CCCCCCCceeEEE-ECCEEEEEEeecCCceEEEEeecCCCCCCe
Q 046684 208 RGMLYWITSARAYSVIGFDIESNT---WRELSA---PMADRLEFATLVS-RNQKLTLIGGTCGGDACVWELSEGGDDDIW 280 (373)
Q Consensus 208 ~g~ly~~gg~~~~~i~~yd~~~~~---w~~~~~---~~p~~~~~~~~~~-~~g~l~~~gg~~~~~~~i~~~~~~~~~~~W 280 (373)
+|++|++-| +..+.||-.+.. =+.+.. -+|.......+.. .+|++|++.|. +.|.+++ .++
T Consensus 61 ~g~~yfFkg---~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~-----~yw~yd~--~~~-- 128 (196)
T 3c7x_A 61 DGKFVFFKG---DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN-----KYYRFNE--ELR-- 128 (196)
T ss_dssp TSCEEEEET---TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT-----EEEEEET--TTT--
T ss_pred CCcEEEecC---CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC-----EEEEEeC--Ccc--
Confidence 688999854 467888754211 011200 0221112111211 26899998763 5788876 222
Q ss_pred EEEEeechhhhhhhcCCCCCCCceEEEecC-CEEEEEEcCCccEEEEEccccCC
Q 046684 281 CLIEKVPIEMGMRLSGGKASWGGTRCAAGN-GAICLYREVGLGMIIWREDEDKR 333 (373)
Q Consensus 281 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~yd~~~~~~ 333 (373)
+....-|.... .+. +.......+....+ +.+|++.|. ..+.||.. ++
T Consensus 129 ~v~~gyPk~i~-~~~-gip~~idaAf~~~~~~~~YfFkg~--~y~r~d~~--~~ 176 (196)
T 3c7x_A 129 AVDSEYPKNIK-VWE-GIPESPRGSFMGSDEVFTYFYKGN--KYWKFNNQ--KL 176 (196)
T ss_dssp EECTTCSEEGG-GSB-TCCSSCSEEEECTTSSEEEEEETT--EEEEEETT--TT
T ss_pred cccCCCCccHH-HCC-CcCCCcceeEEecCCCEEEEEECC--EEEEEECC--cc
Confidence 22211222222 111 11111123333334 499999877 59999998 77
Done!