Query 046692
Match_columns 464
No_of_seqs 312 out of 2415
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 3E-36 1E-40 297.4 24.6 255 156-459 37-304 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 4.9E-36 1.7E-40 294.4 25.7 254 158-458 30-293 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 5.3E-36 1.8E-40 294.7 23.5 257 157-458 23-288 (306)
4 2vpj_A Kelch-like protein 12; 100.0 7.4E-36 2.5E-40 292.8 21.9 254 157-459 30-295 (301)
5 4asc_A Kelch repeat and BTB do 100.0 2.5E-35 8.6E-40 291.5 21.8 256 158-458 13-291 (315)
6 2woz_A Kelch repeat and BTB do 100.0 6.3E-35 2.1E-39 289.0 21.3 253 160-458 26-301 (318)
7 3ii7_A Kelch-like protein 7; p 100.0 1.1E-33 3.9E-38 278.1 26.9 222 189-458 10-241 (306)
8 1zgk_A Kelch-like ECH-associat 100.0 1.2E-33 4E-38 278.8 26.5 228 188-458 22-256 (308)
9 2xn4_A Kelch-like protein 2; s 100.0 1E-33 3.5E-38 277.8 25.6 225 188-458 13-245 (302)
10 2vpj_A Kelch-like protein 12; 100.0 5E-33 1.7E-37 272.6 27.6 225 188-458 12-247 (301)
11 4asc_A Kelch repeat and BTB do 100.0 7.6E-33 2.6E-37 273.6 23.0 229 189-459 3-238 (315)
12 2woz_A Kelch repeat and BTB do 100.0 3.9E-32 1.3E-36 268.9 21.1 228 188-458 13-247 (318)
13 2uvk_A YJHT; unknown function, 100.0 6.6E-32 2.2E-36 271.2 20.2 233 188-458 17-310 (357)
14 2uvk_A YJHT; unknown function, 100.0 3.9E-31 1.3E-35 265.6 18.3 264 159-452 32-352 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 2.5E-30 8.6E-35 282.8 13.8 215 188-448 395-641 (695)
16 1k3i_A Galactose oxidase precu 100.0 6E-28 2E-32 262.5 18.1 261 160-459 168-514 (656)
17 2zwa_A Leucine carboxyl methyl 99.9 2.5E-25 8.6E-30 243.2 16.7 231 158-432 412-674 (695)
18 1k3i_A Galactose oxidase precu 99.9 3E-23 1E-27 225.4 19.5 242 159-432 220-530 (656)
19 1p22_A F-BOX/WD-repeat protein 97.8 0.00053 1.8E-08 69.3 17.5 36 141-176 12-51 (435)
20 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.0017 6E-08 65.4 20.7 42 138-179 17-58 (445)
21 3v7d_B Cell division control p 97.4 0.0061 2.1E-07 61.5 18.6 38 139-176 14-51 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 97.1 0.00018 6.2E-09 50.7 2.1 42 139-180 8-49 (53)
23 3dsm_A Uncharacterized protein 97.0 0.096 3.3E-06 50.6 21.3 185 205-447 16-217 (328)
24 3dsm_A Uncharacterized protein 96.9 0.17 5.9E-06 48.8 22.3 192 189-446 52-257 (328)
25 3mbr_X Glutamine cyclotransfer 96.7 0.12 4.2E-06 48.2 18.2 68 189-276 29-96 (243)
26 2e31_A FBS1, F-box only protei 96.6 0.00067 2.3E-08 65.5 2.4 45 140-184 51-96 (297)
27 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.3 1E-05 47.7 21.3 191 188-447 51-265 (376)
28 3nol_A Glutamine cyclotransfer 96.2 0.17 5.8E-06 47.7 16.0 68 190-277 52-119 (262)
29 3nok_A Glutaminyl cyclase; bet 96.1 0.23 7.9E-06 47.0 16.2 66 189-277 63-128 (268)
30 2z2n_A Virginiamycin B lyase; 96.0 0.43 1.5E-05 44.1 18.4 187 190-444 109-297 (299)
31 1l0q_A Surface layer protein; 95.8 0.28 9.6E-06 47.7 16.7 188 191-447 2-194 (391)
32 3q7m_A Lipoprotein YFGL, BAMB; 95.6 0.9 3.1E-05 44.1 19.5 65 370-444 273-339 (376)
33 2z2n_A Virginiamycin B lyase; 95.5 1.4 4.9E-05 40.4 20.3 66 374-448 193-260 (299)
34 1l0q_A Surface layer protein; 95.5 0.53 1.8E-05 45.6 17.2 188 189-445 42-236 (391)
35 3mbr_X Glutamine cyclotransfer 95.2 0.4 1.4E-05 44.7 14.2 40 231-284 23-62 (243)
36 2iwa_A Glutamine cyclotransfer 95.1 1 3.4E-05 42.5 16.9 66 191-276 32-97 (266)
37 3jrp_A Fusion protein of prote 95.0 0.98 3.4E-05 43.0 17.4 64 374-443 171-241 (379)
38 2qc5_A Streptogramin B lactona 95.0 1.9 6.5E-05 39.6 18.9 191 190-448 30-223 (300)
39 3jrp_A Fusion protein of prote 94.8 0.83 2.9E-05 43.5 16.2 73 375-453 221-299 (379)
40 3vgz_A Uncharacterized protein 94.8 2.3 7.8E-05 40.1 19.1 65 374-447 242-308 (353)
41 3hfq_A Uncharacterized protein 94.8 0.44 1.5E-05 45.5 14.0 62 207-282 19-80 (347)
42 3vgz_A Uncharacterized protein 94.5 3.3 0.00011 39.0 21.4 207 189-454 51-274 (353)
43 1k8k_C P40, ARP2/3 complex 41 94.4 3.1 0.00011 39.4 19.1 72 374-453 213-287 (372)
44 3bws_A Protein LP49; two-domai 94.3 0.91 3.1E-05 44.6 15.5 181 207-446 102-296 (433)
45 2qc5_A Streptogramin B lactona 94.3 3.1 0.00011 38.1 20.0 66 374-448 198-265 (300)
46 1q7f_A NHL, brain tumor CG1071 94.0 3.6 0.00012 37.8 20.1 64 373-442 216-280 (286)
47 1k8k_C P40, ARP2/3 complex 41 94.0 1.8 6E-05 41.2 16.5 69 190-280 19-89 (372)
48 3g4e_A Regucalcin; six bladed 93.8 3.5 0.00012 38.5 17.9 72 375-452 161-239 (297)
49 3nol_A Glutamine cyclotransfer 93.8 0.59 2E-05 44.0 11.9 34 232-279 46-79 (262)
50 3dwl_C Actin-related protein 2 93.7 0.52 1.8E-05 45.4 11.9 70 190-281 22-94 (377)
51 1ri6_A Putative isomerase YBHE 93.5 1.6 5.6E-05 40.8 15.0 73 375-453 243-321 (343)
52 2ovr_B FBW7, F-BOX/WD repeat p 93.5 4.5 0.00015 39.9 18.8 67 374-446 328-395 (445)
53 3bws_A Protein LP49; two-domai 93.5 2 7E-05 42.0 16.1 65 375-447 315-395 (433)
54 3hve_A Gigaxonin; ubiquitin, c 93.1 0.017 5.7E-07 54.4 0.1 49 118-170 202-253 (256)
55 3i3n_A Kelch-like protein 11; 93.1 0.022 7.5E-07 54.3 0.9 48 118-169 210-259 (279)
56 3jro_A Fusion protein of prote 93.1 1.4 4.7E-05 47.7 15.2 64 374-443 169-239 (753)
57 1p22_A F-BOX/WD-repeat protein 93.0 0.42 1.4E-05 47.6 10.3 83 373-462 344-434 (435)
58 3nok_A Glutaminyl cyclase; bet 93.0 0.97 3.3E-05 42.6 11.9 30 232-277 58-87 (268)
59 3dwl_C Actin-related protein 2 92.8 1.7 5.9E-05 41.6 14.2 75 374-454 216-293 (377)
60 1gxr_A ESG1, transducin-like e 92.7 6.2 0.00021 36.5 18.8 67 374-448 194-261 (337)
61 2hqs_A Protein TOLB; TOLB, PAL 92.6 3.8 0.00013 40.5 16.8 187 206-450 203-395 (415)
62 3u4y_A Uncharacterized protein 92.5 4.5 0.00015 37.8 16.4 65 189-277 8-74 (331)
63 3fm0_A Protein CIAO1; WDR39,SG 92.2 3.4 0.00012 39.5 15.4 61 374-440 161-223 (345)
64 3v7d_B Cell division control p 92.1 5.7 0.0002 39.2 17.4 67 373-447 360-426 (464)
65 3u4y_A Uncharacterized protein 91.7 4 0.00014 38.1 15.0 69 376-450 189-260 (331)
66 4ery_A WD repeat-containing pr 91.7 8.3 0.00028 35.7 17.5 65 374-444 160-225 (312)
67 1jmx_B Amine dehydrogenase; ox 91.4 9.1 0.00031 35.6 17.3 68 189-278 9-78 (349)
68 3vl1_A 26S proteasome regulato 91.4 11 0.00037 36.4 18.4 63 373-443 257-323 (420)
69 3scy_A Hypothetical bacterial 91.3 9 0.00031 36.4 17.4 82 191-284 13-96 (361)
70 2iwa_A Glutamine cyclotransfer 91.3 2.9 0.0001 39.3 13.2 62 374-444 75-137 (266)
71 1n7d_A LDL receptor, low-densi 91.3 11 0.00036 40.5 19.4 84 373-462 550-636 (699)
72 2hes_X YDR267CP; beta-propelle 91.0 4.7 0.00016 38.2 14.9 62 375-442 261-328 (330)
73 1gxr_A ESG1, transducin-like e 91.0 9.5 0.00033 35.1 17.8 65 373-446 234-300 (337)
74 1ri6_A Putative isomerase YBHE 90.8 10 0.00035 35.1 17.3 65 375-445 141-214 (343)
75 4aez_A CDC20, WD repeat-contai 90.6 9.7 0.00033 36.9 17.0 64 374-445 228-296 (401)
76 4gqb_B Methylosome protein 50; 90.4 7.7 0.00026 37.3 15.9 64 374-445 226-292 (344)
77 4g56_B MGC81050 protein; prote 90.3 6.2 0.00021 37.9 15.1 59 375-442 282-343 (357)
78 2dg1_A DRP35, lactonase; beta 90.2 12 0.00041 34.9 18.5 70 190-278 55-125 (333)
79 3no2_A Uncharacterized protein 89.8 12 0.00043 34.6 18.9 66 372-447 133-202 (276)
80 3v9f_A Two-component system se 89.8 8.1 0.00028 41.7 17.0 175 207-442 470-656 (781)
81 2pm7_B Protein transport prote 89.4 13 0.00045 34.3 17.0 62 375-442 170-238 (297)
82 4ery_A WD repeat-containing pr 89.3 13 0.00046 34.2 18.6 65 374-444 203-270 (312)
83 3bg1_A Protein SEC13 homolog; 89.1 11 0.00038 35.2 15.7 61 376-442 180-247 (316)
84 1q7f_A NHL, brain tumor CG1071 89.1 13 0.00044 33.9 21.1 69 373-448 173-244 (286)
85 4e54_B DNA damage-binding prot 89.1 13 0.00045 36.5 16.8 71 190-281 131-203 (435)
86 3ei3_B DNA damage-binding prot 89.1 7.6 0.00026 37.1 14.7 69 192-281 87-157 (383)
87 3hfq_A Uncharacterized protein 89.1 15 0.0005 34.5 16.6 77 376-458 253-338 (347)
88 1rwi_B Serine/threonine-protei 89.0 12 0.00042 33.5 18.4 63 374-444 160-224 (270)
89 3l2o_B F-box only protein 4; s 89.0 0.13 4.4E-06 49.3 1.6 41 142-182 7-47 (312)
90 3jro_A Fusion protein of prote 89.0 4.5 0.00015 43.6 14.1 72 375-452 219-296 (753)
91 2aq5_A Coronin-1A; WD40 repeat 88.9 14 0.00046 35.8 16.6 75 373-450 230-309 (402)
92 4a2l_A BT_4663, two-component 88.9 27 0.00092 37.6 20.4 66 373-449 552-621 (795)
93 3e5z_A Putative gluconolactona 88.6 15 0.0005 33.8 17.1 66 191-281 40-106 (296)
94 3bg1_A Protein SEC13 homolog; 88.4 7.3 0.00025 36.5 13.8 72 376-455 229-307 (316)
95 3m0c_C LDL receptor, low-densi 88.4 32 0.0011 37.4 22.7 84 373-462 568-654 (791)
96 2hes_X YDR267CP; beta-propelle 88.2 17 0.00057 34.2 16.2 68 376-449 212-287 (330)
97 4g56_B MGC81050 protein; prote 88.1 12 0.0004 36.0 15.3 65 374-446 238-305 (357)
98 3mkq_A Coatomer beta'-subunit; 88.0 8.5 0.00029 41.1 15.6 65 374-444 152-219 (814)
99 3zwl_B Eukaryotic translation 88.0 17 0.00058 33.8 18.6 66 374-446 186-253 (369)
100 1qks_A Cytochrome CD1 nitrite 87.9 13 0.00043 38.8 16.2 64 391-454 320-389 (567)
101 3v9f_A Two-component system se 87.6 21 0.00073 38.2 18.5 179 207-449 428-618 (781)
102 1nir_A Nitrite reductase; hemo 87.2 12 0.00041 38.6 15.6 67 374-446 291-359 (543)
103 4gqb_B Methylosome protein 50; 86.8 21 0.00071 34.1 16.2 58 376-442 271-331 (344)
104 1qhu_A Protein (hemopexin); be 86.7 20 0.00069 36.4 16.3 60 190-276 158-217 (460)
105 2aq5_A Coronin-1A; WD40 repeat 86.2 25 0.00084 33.8 18.1 64 374-443 187-255 (402)
106 1npe_A Nidogen, entactin; glyc 86.2 19 0.00065 32.6 20.0 63 374-446 178-242 (267)
107 1kb0_A Quinohemoprotein alcoho 86.2 38 0.0013 35.9 20.7 69 188-279 75-154 (677)
108 2pm9_A Protein WEB1, protein t 86.1 22 0.00074 34.0 16.1 63 375-443 178-250 (416)
109 1pjx_A Dfpase, DIISOPROPYLFLUO 84.9 23 0.0008 32.4 17.6 57 206-280 46-106 (314)
110 4aez_A CDC20, WD repeat-contai 84.7 29 0.001 33.4 16.6 53 392-444 328-382 (401)
111 3vl1_A 26S proteasome regulato 84.1 30 0.001 33.1 19.8 66 371-442 342-419 (420)
112 3p5b_L Low density lipoprotein 84.1 34 0.0011 33.6 21.6 83 373-461 256-341 (400)
113 1sq9_A Antiviral protein SKI8; 84.0 16 0.00055 34.7 13.9 64 374-444 197-269 (397)
114 1rwi_B Serine/threonine-protei 83.9 23 0.00079 31.6 16.3 185 190-443 77-265 (270)
115 2vdu_B TRNA (guanine-N(7)-)-me 83.6 35 0.0012 33.4 20.3 55 391-446 330-397 (450)
116 4a2l_A BT_4663, two-component 82.9 35 0.0012 36.6 17.4 59 392-450 194-252 (795)
117 4a11_B DNA excision repair pro 82.3 20 0.00069 33.9 13.8 22 423-444 256-278 (408)
118 1ijq_A LDL receptor, low-densi 82.2 34 0.0012 32.2 22.0 80 373-458 174-256 (316)
119 3fvz_A Peptidyl-glycine alpha- 82.0 34 0.0012 32.1 23.2 68 375-448 208-283 (329)
120 3lrv_A PRE-mRNA-splicing facto 82.0 34 0.0012 32.1 17.0 65 373-444 180-246 (343)
121 3f3f_A Nucleoporin SEH1; struc 81.3 32 0.0011 31.3 17.4 63 375-443 182-250 (351)
122 2ast_B S-phase kinase-associat 81.2 0.5 1.7E-05 45.3 1.6 41 138-178 7-47 (336)
123 2pm7_B Protein transport prote 80.8 34 0.0012 31.4 17.1 71 375-451 219-295 (297)
124 3scy_A Hypothetical bacterial 80.7 38 0.0013 31.8 18.5 71 376-452 224-303 (361)
125 1yiq_A Quinohemoprotein alcoho 80.4 12 0.00042 39.9 12.4 71 371-448 118-200 (689)
126 2ojh_A Uncharacterized protein 79.9 32 0.0011 30.5 16.5 58 205-282 21-80 (297)
127 2p4o_A Hypothetical protein; p 79.9 38 0.0013 31.4 15.7 64 374-447 178-246 (306)
128 3odt_A Protein DOA1; ubiquitin 79.7 35 0.0012 30.8 14.6 67 378-451 239-305 (313)
129 2ynn_A Coatomer subunit beta'; 78.9 40 0.0014 31.0 15.1 64 190-276 24-88 (304)
130 2eqx_A Kelch repeat and BTB do 78.5 0.32 1.1E-05 38.9 -0.7 24 117-140 75-100 (105)
131 1vyh_C Platelet-activating fac 78.5 50 0.0017 32.0 16.2 25 374-404 245-269 (410)
132 1kv9_A Type II quinohemoprotei 78.4 14 0.00048 39.3 12.0 69 372-447 115-194 (668)
133 2ad6_A Methanol dehydrogenase 78.2 26 0.0009 36.4 13.8 70 372-448 113-193 (571)
134 1nir_A Nitrite reductase; hemo 78.1 37 0.0013 34.9 14.8 65 375-444 382-460 (543)
135 3i2n_A WD repeat-containing pr 78.1 41 0.0014 31.0 14.2 68 374-447 128-204 (357)
136 1vyh_C Platelet-activating fac 78.1 52 0.0018 31.9 16.8 61 375-443 308-370 (410)
137 3i2n_A WD repeat-containing pr 78.1 30 0.001 31.9 13.2 61 373-442 178-243 (357)
138 1r5m_A SIR4-interacting protei 78.0 47 0.0016 31.4 16.4 63 374-444 258-321 (425)
139 3sfz_A APAF-1, apoptotic pepti 78.0 15 0.00053 41.5 12.9 64 373-444 1095-1160(1249)
140 2vdu_B TRNA (guanine-N(7)-)-me 77.9 55 0.0019 32.0 18.0 25 374-404 251-275 (450)
141 3k26_A Polycomb protein EED; W 77.7 44 0.0015 30.8 14.6 64 191-277 85-150 (366)
142 3ott_A Two-component system se 77.2 36 0.0012 36.3 15.0 130 265-442 493-626 (758)
143 2dg1_A DRP35, lactonase; beta 76.9 17 0.00057 33.9 11.0 27 238-280 55-81 (333)
144 1yfq_A Cell cycle arrest prote 76.4 47 0.0016 30.5 14.9 57 207-282 34-97 (342)
145 3dm0_A Maltose-binding peripla 76.4 78 0.0027 33.0 17.5 65 373-445 571-635 (694)
146 3sfz_A APAF-1, apoptotic pepti 75.9 43 0.0015 37.7 15.8 67 374-446 754-832 (1249)
147 1got_B GT-beta; complex (GTP-b 75.8 52 0.0018 30.7 17.9 65 374-444 237-303 (340)
148 1erj_A Transcriptional repress 75.6 58 0.002 31.2 15.4 60 373-440 320-387 (393)
149 3ei3_B DNA damage-binding prot 75.5 24 0.00081 33.5 11.8 52 391-442 330-382 (383)
150 2p1m_B Transport inhibitor res 75.2 0.72 2.5E-05 47.9 0.7 36 138-173 4-40 (594)
151 3mkq_A Coatomer beta'-subunit; 75.2 48 0.0016 35.1 15.3 63 374-444 197-261 (814)
152 3oyo_A Hemopexin fold protein 75.1 13 0.00043 33.9 9.0 78 373-462 126-217 (225)
153 1erj_A Transcriptional repress 74.3 48 0.0016 31.8 13.9 66 190-278 134-200 (393)
154 3ow8_A WD repeat-containing pr 74.2 57 0.0019 30.4 17.7 65 373-445 174-240 (321)
155 3odt_A Protein DOA1; ubiquitin 73.0 53 0.0018 29.5 16.7 63 374-444 154-216 (313)
156 3v65_B Low-density lipoprotein 72.9 71 0.0024 30.9 22.9 82 373-462 256-340 (386)
157 1pgu_A Actin interacting prote 72.5 82 0.0028 31.6 15.7 63 193-278 175-242 (615)
158 1w6s_A Methanol dehydrogenase 72.1 22 0.00074 37.4 11.2 57 392-448 132-199 (599)
159 1got_B GT-beta; complex (GTP-b 71.5 66 0.0023 30.0 17.3 63 374-444 195-259 (340)
160 3fm0_A Protein CIAO1; WDR39,SG 71.0 69 0.0024 30.0 18.0 63 191-275 73-137 (345)
161 3fvz_A Peptidyl-glycine alpha- 70.5 69 0.0024 29.8 21.9 68 375-442 251-322 (329)
162 4aow_A Guanine nucleotide-bind 70.2 27 0.00094 32.0 10.6 23 373-401 316-338 (340)
163 4h5i_A Guanine nucleotide-exch 69.4 79 0.0027 30.0 17.3 62 373-442 279-343 (365)
164 1r5m_A SIR4-interacting protei 69.3 76 0.0026 29.8 17.0 60 377-444 302-363 (425)
165 4gga_A P55CDC, cell division c 69.0 84 0.0029 30.2 16.9 55 206-277 125-181 (420)
166 1kv9_A Type II quinohemoprotei 68.3 1.2E+02 0.0042 31.8 22.2 69 188-279 64-143 (668)
167 3zwl_B Eukaryotic translation 67.9 74 0.0025 29.2 14.8 26 374-405 229-254 (369)
168 2pbi_B Guanine nucleotide-bind 67.3 85 0.0029 29.6 16.2 58 373-438 294-353 (354)
169 4gga_A P55CDC, cell division c 67.2 55 0.0019 31.6 12.5 135 266-443 126-262 (420)
170 3ow8_A WD repeat-containing pr 66.6 82 0.0028 29.2 18.7 63 374-444 217-281 (321)
171 2xdw_A Prolyl endopeptidase; a 66.1 1.3E+02 0.0046 31.4 16.7 62 205-281 258-330 (710)
172 2ynn_A Coatomer subunit beta'; 65.9 80 0.0027 28.8 16.2 64 374-445 197-262 (304)
173 3pe7_A Oligogalacturonate lyas 65.3 91 0.0031 29.2 16.5 63 390-452 215-283 (388)
174 2xbg_A YCF48-like protein; pho 65.1 92 0.0032 29.2 17.5 60 374-440 260-320 (327)
175 4aow_A Guanine nucleotide-bind 64.5 84 0.0029 28.6 16.7 62 374-444 226-288 (340)
176 3no2_A Uncharacterized protein 64.2 87 0.003 28.6 17.4 70 372-447 173-259 (276)
177 2xyi_A Probable histone-bindin 64.0 67 0.0023 31.2 12.5 63 374-442 243-309 (430)
178 4e54_B DNA damage-binding prot 63.7 1.1E+02 0.0036 29.7 13.9 53 207-275 188-241 (435)
179 1flg_A Protein (quinoprotein e 63.3 45 0.0016 34.6 11.5 69 372-447 115-200 (582)
180 2ojh_A Uncharacterized protein 62.6 81 0.0028 27.7 17.6 64 207-282 63-127 (297)
181 3c5m_A Oligogalacturonate lyas 62.3 92 0.0031 29.1 12.9 64 206-282 168-233 (396)
182 2fp8_A Strictosidine synthase; 62.3 98 0.0034 28.6 13.2 51 392-443 261-314 (322)
183 2pm9_A Protein WEB1, protein t 61.7 1.1E+02 0.0037 28.9 17.6 63 374-444 274-339 (416)
184 3ogk_B Coronatine-insensitive 61.7 1.8 6E-05 45.0 0.2 33 141-173 14-47 (592)
185 3v64_C Agrin; beta propeller, 61.0 1.1E+02 0.0039 28.9 23.4 206 189-462 83-297 (349)
186 4ggc_A P55CDC, cell division c 59.7 90 0.0031 28.0 11.9 15 266-280 46-60 (318)
187 3ott_A Two-component system se 59.4 1.5E+02 0.0052 31.3 15.2 55 392-449 212-267 (758)
188 3azo_A Aminopeptidase; POP fam 59.3 1.6E+02 0.0055 30.1 18.5 68 375-450 305-377 (662)
189 3dr2_A Exported gluconolactona 59.3 63 0.0022 29.7 10.8 50 391-444 169-226 (305)
190 3pe7_A Oligogalacturonate lyas 59.2 1.2E+02 0.004 28.4 13.0 65 206-282 168-233 (388)
191 2hqs_A Protein TOLB; TOLB, PAL 59.1 1.3E+02 0.0045 29.0 21.4 189 206-450 159-352 (415)
192 3frx_A Guanine nucleotide-bind 58.1 1.1E+02 0.0039 28.0 13.8 63 373-443 206-268 (319)
193 2p4o_A Hypothetical protein; p 57.5 1.2E+02 0.004 27.9 13.3 52 392-443 96-148 (306)
194 4a11_B DNA excision repair pro 56.6 1.3E+02 0.0043 28.1 16.8 50 392-443 315-366 (408)
195 3f3f_A Nucleoporin SEH1; struc 56.5 1.1E+02 0.0038 27.4 17.3 30 423-452 317-348 (351)
196 1sq9_A Antiviral protein SKI8; 56.5 1.3E+02 0.0044 28.1 14.1 66 193-276 199-269 (397)
197 1jmx_B Amine dehydrogenase; ox 54.3 50 0.0017 30.3 9.1 70 372-447 8-79 (349)
198 2xyi_A Probable histone-bindin 53.2 1.5E+02 0.0052 28.5 13.0 24 423-446 389-414 (430)
199 1pby_B Quinohemoprotein amine 52.8 1.3E+02 0.0045 27.1 14.1 15 432-446 114-128 (337)
200 2bkl_A Prolyl endopeptidase; m 48.9 1.9E+02 0.0065 30.1 13.6 60 205-280 251-313 (695)
201 3iz6_a 40S ribosomal protein R 48.9 1.8E+02 0.0061 27.5 17.4 66 374-445 260-332 (380)
202 1pgu_A Actin interacting prote 48.9 2.1E+02 0.0073 28.4 17.2 61 374-442 552-614 (615)
203 3hrp_A Uncharacterized protein 48.8 2E+02 0.0067 28.0 18.7 199 189-449 140-361 (409)
204 1pby_B Quinohemoprotein amine 48.5 1.5E+02 0.0052 26.6 16.3 52 391-446 115-167 (337)
205 3ju4_A Endo-N-acetylneuraminid 48.4 1.3E+02 0.0043 30.1 10.7 133 274-430 269-404 (670)
206 3iz6_a 40S ribosomal protein R 48.3 1.8E+02 0.0062 27.4 20.3 65 373-443 308-376 (380)
207 3o4h_A Acylamino-acid-releasin 47.9 2.2E+02 0.0075 28.6 13.6 59 208-282 134-192 (582)
208 3azo_A Aminopeptidase; POP fam 47.8 2E+02 0.007 29.3 13.5 71 375-449 253-332 (662)
209 1itv_A MMP9; adaptive molecula 47.3 1.4E+02 0.0049 26.0 13.8 149 233-444 11-176 (195)
210 2hz6_A Endoplasmic reticulum t 47.3 6.9 0.00024 38.1 1.8 26 422-447 129-156 (369)
211 2pbi_B Guanine nucleotide-bind 46.2 1.9E+02 0.0065 27.0 17.9 62 375-444 210-273 (354)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 46.1 46 0.0016 30.2 7.4 74 373-448 27-106 (314)
213 2ad6_A Methanol dehydrogenase 45.2 59 0.002 33.6 8.7 72 370-447 58-141 (571)
214 3tc9_A Hypothetical hydrolase; 44.8 1.1E+02 0.0036 30.3 10.2 60 375-441 238-300 (430)
215 2ghs_A AGR_C_1268P; regucalcin 44.7 1.9E+02 0.0066 26.7 20.9 66 190-282 60-126 (326)
216 3iuj_A Prolyl endopeptidase; h 44.4 3E+02 0.01 28.7 17.9 60 206-280 259-323 (693)
217 1kb0_A Quinohemoprotein alcoho 44.3 46 0.0016 35.2 7.8 72 370-448 73-155 (677)
218 1flg_A Protein (quinoprotein e 44.1 73 0.0025 33.0 9.2 72 369-447 63-143 (582)
219 2xbg_A YCF48-like protein; pho 43.8 2E+02 0.007 26.7 17.7 69 374-450 173-243 (327)
220 3v65_B Low-density lipoprotein 43.4 2.3E+02 0.0078 27.2 18.4 171 206-443 96-278 (386)
221 2ecf_A Dipeptidyl peptidase IV 43.0 3E+02 0.01 28.4 15.2 59 390-449 311-375 (741)
222 1yiq_A Quinohemoprotein alcoho 42.8 3.2E+02 0.011 28.7 24.4 70 188-280 68-148 (689)
223 3mmy_A MRNA export factor; mRN 42.3 2E+02 0.0067 26.1 15.4 67 191-279 54-122 (368)
224 1yr2_A Prolyl oligopeptidase; 41.6 3.3E+02 0.011 28.5 15.8 62 205-281 293-359 (741)
225 1n7d_A LDL receptor, low-densi 41.6 2.6E+02 0.0087 29.6 13.2 69 373-448 506-577 (699)
226 3g4e_A Regucalcin; six bladed 41.5 81 0.0028 28.8 8.3 68 374-451 24-91 (297)
227 2ghs_A AGR_C_1268P; regucalcin 41.5 1.1E+02 0.0039 28.4 9.5 67 375-451 61-127 (326)
228 3b7f_A Glycosyl hydrolase, BNR 41.1 2.4E+02 0.0083 26.8 15.6 183 208-452 33-273 (394)
229 2xzm_R RACK1; ribosome, transl 41.0 2.2E+02 0.0074 26.2 15.5 65 373-444 223-287 (343)
230 3lrv_A PRE-mRNA-splicing facto 40.9 67 0.0023 29.9 7.7 65 374-444 138-203 (343)
231 2mad_H Methylamine dehydrogena 40.7 56 0.0019 31.6 7.3 70 374-445 278-353 (373)
232 2z3z_A Dipeptidyl aminopeptida 40.2 3.2E+02 0.011 28.0 15.4 77 190-281 268-351 (706)
233 1qks_A Cytochrome CD1 nitrite 38.3 3.4E+02 0.012 27.7 14.7 61 391-453 364-437 (567)
234 3m0c_C LDL receptor, low-densi 37.4 4.2E+02 0.014 28.5 17.4 64 373-443 524-590 (791)
235 3sjl_D Methylamine dehydrogena 37.3 51 0.0017 32.5 6.3 72 373-446 290-367 (386)
236 2z3z_A Dipeptidyl aminopeptida 36.1 3.7E+02 0.013 27.5 17.3 70 374-449 322-398 (706)
237 3e5z_A Putative gluconolactona 34.7 92 0.0031 28.1 7.4 64 376-449 41-106 (296)
238 4ggc_A P55CDC, cell division c 34.4 2.5E+02 0.0084 24.9 16.5 54 207-277 46-101 (318)
239 1w6s_A Methanol dehydrogenase 33.1 4.3E+02 0.015 27.3 20.9 70 188-279 60-147 (599)
240 3gre_A Serine/threonine-protei 32.7 2.7E+02 0.0093 26.3 10.9 63 375-444 226-294 (437)
241 1nr0_A Actin interacting prote 32.6 4.1E+02 0.014 26.9 18.1 66 374-447 293-360 (611)
242 2bkl_A Prolyl endopeptidase; m 31.9 4.5E+02 0.015 27.2 19.9 70 374-447 281-356 (695)
243 3gre_A Serine/threonine-protei 31.6 3.4E+02 0.012 25.7 16.7 24 421-444 337-361 (437)
244 3k26_A Polycomb protein EED; W 29.0 3.2E+02 0.011 24.6 19.8 62 375-442 299-366 (366)
245 1pex_A Collagenase-3, MMP-13; 29.0 3E+02 0.01 24.2 14.5 23 372-402 172-194 (207)
246 2xdw_A Prolyl endopeptidase; a 28.0 5.2E+02 0.018 26.7 19.8 68 373-444 296-370 (710)
247 3hrp_A Uncharacterized protein 27.4 4.2E+02 0.014 25.5 19.5 63 373-441 332-409 (409)
248 3hxj_A Pyrrolo-quinoline quino 27.1 3.4E+02 0.012 24.3 14.7 62 373-446 186-249 (330)
249 2oiz_A Aromatic amine dehydrog 26.2 2.7E+02 0.0093 26.2 9.5 73 374-450 265-342 (361)
250 2ymu_A WD-40 repeat protein; u 25.5 4.9E+02 0.017 25.5 15.5 67 373-448 395-463 (577)
251 1ijq_A LDL receptor, low-densi 23.7 4.3E+02 0.015 24.2 19.6 64 373-443 130-196 (316)
252 3sov_A LRP-6, low-density lipo 22.6 4.6E+02 0.016 24.2 22.3 81 373-461 176-259 (318)
253 1pex_A Collagenase-3, MMP-13; 22.2 3E+02 0.01 24.2 8.1 63 190-277 127-195 (207)
254 3v64_C Agrin; beta propeller, 22.1 4.9E+02 0.017 24.3 20.4 171 206-443 53-235 (349)
255 2hz6_A Endoplasmic reticulum t 21.8 98 0.0034 29.6 5.2 66 370-447 5-75 (369)
256 2fp8_A Strictosidine synthase; 21.8 2.1E+02 0.0071 26.2 7.5 59 391-449 40-117 (322)
257 4a0p_A LRP6, LRP-6, low-densit 21.5 6.9E+02 0.023 25.8 21.1 78 374-461 177-258 (628)
258 3q6k_A 43.2 kDa salivary prote 21.4 5.7E+02 0.019 24.8 16.9 51 374-431 286-342 (381)
259 2qe8_A Uncharacterized protein 21.3 3.6E+02 0.012 24.9 9.2 75 374-449 77-162 (343)
260 1npe_A Nidogen, entactin; glyc 20.9 4.2E+02 0.014 23.1 16.0 64 374-443 133-199 (267)
261 1ck7_A Protein (gelatinase A); 20.1 6.2E+02 0.021 26.4 11.1 63 373-444 547-617 (631)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3e-36 Score=297.37 Aligned_cols=255 Identities=20% Similarity=0.258 Sum_probs=212.8
Q ss_pred CcchhhhhhccccccccccCCchHHHHHhh--ccCCCCeEEEeccc----cCCccccceEEeeCCCCceeeccccccCCC
Q 046692 156 PLTSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAV----KDGYCSGEIHALDVSQDQWHRIDASILKGR 229 (464)
Q Consensus 156 p~~sl~~~~~vck~W~~l~~~~~f~~~r~~--~~~~~~~l~v~GG~----~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R 229 (464)
+..++..+++.+++|..+...|. .|.. ....++.||++||. ......++++.||+.+++|.++++ ++.+|
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r 112 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQV---PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP-MSVPR 112 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC-CSSCC
T ss_pred CcceEEEEcCCCCeEeECCCCCc---ccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC-CCcCc
Confidence 34567889999999999977664 2222 23568999999998 444567889999999999999988 78999
Q ss_pred cceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCC
Q 046692 230 FMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQS 309 (464)
Q Consensus 230 ~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~ 309 (464)
..|++++++++|||+||..+ . ...+++++||+.+++|+.+++||.+|..+++++++
T Consensus 113 ~~~~~~~~~~~iyv~GG~~~---------~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------------- 168 (308)
T 1zgk_A 113 NRIGVGVIDGHIYAVGGSHG---------C--IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN------------- 168 (308)
T ss_dssp BTCEEEEETTEEEEECCEET---------T--EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET-------------
T ss_pred cccEEEEECCEEEEEcCCCC---------C--cccccEEEECCCCCeEeECCCCCccccceEEEEEC-------------
Confidence 99999999999999999532 1 34678999999999999999999999999999886
Q ss_pred CCCCccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCC
Q 046692 310 HQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDE 388 (464)
Q Consensus 310 ~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~ 388 (464)
+ .||++||.++ ...++.+++||+.+++|+. .++|.++.. +++++.+++||++||.+.. .
T Consensus 169 ---~--~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~ 228 (308)
T 1zgk_A 169 ---R--LLYAVGGFDG----TNRLNSAECYYPERNEWRMITAMNTIRSG----------AGVCVLHNCIYAAGGYDGQ-D 228 (308)
T ss_dssp ---T--EEEEECCBCS----SCBCCCEEEEETTTTEEEECCCCSSCCBS----------CEEEEETTEEEEECCBCSS-S
T ss_pred ---C--EEEEEeCCCC----CCcCceEEEEeCCCCeEeeCCCCCCcccc----------ceEEEECCEEEEEeCCCCC-C
Confidence 3 3899999865 2448899999999999998 666665432 3456779999999998754 4
Q ss_pred ccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC------CceEEEeCCCCcEEEcccCCCCccccc
Q 046692 389 PLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVIE 459 (464)
Q Consensus 389 ~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~~ 459 (464)
.++++++||+.+++|+.++++|.++..+. +++++++|||+||. +.+++||+++++|+.++.||.||..+.
T Consensus 229 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 304 (308)
T 1zgk_A 229 QLNSVERYDVETETWTFVAPMKHRRSALG-ITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVG 304 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCE
T ss_pred ccceEEEEeCCCCcEEECCCCCCCccceE-EEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccce
Confidence 57899999999999999999998877665 45789999999984 579999999999999999999987653
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=294.41 Aligned_cols=254 Identities=19% Similarity=0.258 Sum_probs=211.4
Q ss_pred chhhhhhccccccccccCCchHHHHHhh--ccCCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEE
Q 046692 158 TSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVV 235 (464)
Q Consensus 158 ~sl~~~~~vck~W~~l~~~~~f~~~r~~--~~~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~ 235 (464)
.++..+++..++|..+...|. .|.. ....++.||++||.......++++.||+.+++|..+++ ++.+|..|+++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS---RRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN-MRDRRSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS---CCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCc---ccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC-CCccccceEEE
Confidence 456778899999999877664 2222 23568999999998876677899999999999999998 88999999999
Q ss_pred EECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCcc
Q 046692 236 SIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRF 315 (464)
Q Consensus 236 ~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~ 315 (464)
+++++|||+||..+ ....+++++||+.+++|+.+++||.+|..+++++++ ++
T Consensus 106 ~~~~~iyv~GG~~~-----------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~~- 157 (302)
T 2xn4_A 106 VLNGLLYAVGGFDG-----------STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG----------------GL- 157 (302)
T ss_dssp EETTEEEEEEEECS-----------SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET----------------TE-
T ss_pred EECCEEEEEcCCCC-----------CccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC----------------CE-
Confidence 99999999999532 135688999999999999999999999999999886 33
Q ss_pred ceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceE
Q 046692 316 PRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGE 394 (464)
Q Consensus 316 ~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~ve 394 (464)
||++||.++. ....++.++.||+.+++|+. .++|.++.. +++++.+++||++||.++. ...++++
T Consensus 158 -iyv~GG~~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~~~~~~~ 223 (302)
T 2xn4_A 158 -LYAVGGYDVA--SRQCLSTVECYNATTNEWTYIAEMSTRRSG----------AGVGVLNNLLYAVGGHDGP-LVRKSVE 223 (302)
T ss_dssp -EEEECCEETT--TTEECCCEEEEETTTTEEEEECCCSSCCBS----------CEEEEETTEEEEECCBSSS-SBCCCEE
T ss_pred -EEEEeCCCCC--CCccccEEEEEeCCCCcEEECCCCcccccc----------ccEEEECCEEEEECCCCCC-cccceEE
Confidence 8999998651 12347889999999999999 666665532 3456789999999998653 4578999
Q ss_pred EEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC------CceEEEeCCCCcEEEcc-cCCCCcccc
Q 046692 395 IYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------DKLAGYDIERGFWIGIQ-TSPFPPRVI 458 (464)
Q Consensus 395 vYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~------~~v~~YD~~~~~W~~l~-~lp~pr~~~ 458 (464)
+||+.+++|+.++++|.++..+. +++++++|||+||. +.+++||+++++|+.++ .||.||..|
T Consensus 224 ~yd~~~~~W~~~~~~~~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~ 293 (302)
T 2xn4_A 224 VYDPTTNAWRQVADMNMCRRNAG-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYA 293 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSC
T ss_pred EEeCCCCCEeeCCCCCCccccCe-EEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccc
Confidence 99999999999999998877654 45889999999985 46999999999999997 899988765
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.3e-36 Score=294.72 Aligned_cols=257 Identities=16% Similarity=0.182 Sum_probs=212.7
Q ss_pred cchhhhhhccccccccccCCchHHHHHhh--ccCCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEE
Q 046692 157 LTSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSV 234 (464)
Q Consensus 157 ~~sl~~~~~vck~W~~l~~~~~f~~~r~~--~~~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~ 234 (464)
..++..+++..++|..+...|. .|.. ....++.||++||.. ....++++.||+.+++|..+++ +|.+|..|++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~ 97 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFE---KRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLG-PPTPRDSLAA 97 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSC---CCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEEC-CSSCCBSCEE
T ss_pred CceEEEecCCCCCEecCCCCCc---ccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCC-CCccccceeE
Confidence 3567789999999999987764 2322 236789999999987 5677899999999999999988 7899999999
Q ss_pred EEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCc
Q 046692 235 VSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRR 314 (464)
Q Consensus 235 ~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk 314 (464)
++++++|||+||.+. .....+++++||+.+++|+.+++||.+|..+++++++ ++
T Consensus 98 ~~~~~~iyv~GG~~~----------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~~ 151 (306)
T 3ii7_A 98 CAAEGKIYTSGGSEV----------GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEAN----------------GL 151 (306)
T ss_dssp EEETTEEEEECCBBT----------TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET----------------TE
T ss_pred EEECCEEEEECCCCC----------CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEEC----------------CE
Confidence 999999999999531 1245788999999999999999999999999999886 33
Q ss_pred cceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCce
Q 046692 315 FPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSG 393 (464)
Q Consensus 315 ~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~v 393 (464)
||++||.++.......++.+++||+.+++|+. .++|..+.. +++++.+++||++||.+.. ..++++
T Consensus 152 --iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----------~~~~~~~~~i~v~GG~~~~-~~~~~~ 218 (306)
T 3ii7_A 152 --IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN----------HGLVFVKDKIFAVGGQNGL-GGLDNV 218 (306)
T ss_dssp --EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS----------CEEEEETTEEEEECCEETT-EEBCCE
T ss_pred --EEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc----------ceEEEECCEEEEEeCCCCC-CCCceE
Confidence 89999976521111238899999999999999 666665532 3456789999999998654 457899
Q ss_pred EEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 394 EIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 394 evYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
++||+.+++|+.++++|.++..+. +++++++|||+||. +.++.||+++++|+.++.+|.||..|
T Consensus 219 ~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 288 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSPMPWKGVTVK-CAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTS 288 (306)
T ss_dssp EEEETTTTEEEECCCCSCCBSCCE-EEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTT
T ss_pred EEeeCCCCcEEECCCCCCCcccee-EEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccccee
Confidence 999999999999999998877665 45789999999985 57999999999999999999888754
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.4e-36 Score=292.78 Aligned_cols=254 Identities=18% Similarity=0.290 Sum_probs=213.3
Q ss_pred cchhhhhhccccccccccCCchHHHHHhh--ccCCCCeEEEeccccCCccccceEEeeCCCCc---eeeccccccCCCcc
Q 046692 157 LTSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVKDGYCSGEIHALDVSQDQ---WHRIDASILKGRFM 231 (464)
Q Consensus 157 ~~sl~~~~~vck~W~~l~~~~~f~~~r~~--~~~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~---W~~l~~~~~~~R~~ 231 (464)
..++..+++..++|..+...|. .|.. ....++.||++||.......++++.||+.+++ |..+++ ++.+|..
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~ 105 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-MNVRRGL 105 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC-CSSCCBS
T ss_pred eeEEEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC-CCCCccc
Confidence 4567889999999999887664 2222 23568999999998866678899999999999 999987 7899999
Q ss_pred eEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCC
Q 046692 232 FSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQ 311 (464)
Q Consensus 232 ~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 311 (464)
|++++++++|||+||..+ . ...+++++||+.+++|+.+++||.+|..+++++++
T Consensus 106 ~~~~~~~~~lyv~GG~~~---------~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--------------- 159 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGFDG---------S--RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS--------------- 159 (301)
T ss_dssp CEEEEETTEEEEECCBCS---------S--CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET---------------
T ss_pred eeEEEECCEEEEEcccCC---------C--cccceEEEEcCCCCeEEECCCCCCCcccceEEEEC---------------
Confidence 999999999999999532 1 34688999999999999999999999999999886
Q ss_pred CCccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCcc
Q 046692 312 DRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPL 390 (464)
Q Consensus 312 ~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l 390 (464)
++ ||++||.++ ...++.+++||+.+++|+. .++|.++.. +++++.+++||++||.+.. ..+
T Consensus 160 -~~--iyv~GG~~~----~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----------~~~~~~~~~i~v~GG~~~~-~~~ 221 (301)
T 2vpj_A 160 -GV--IYCLGGYDG----LNILNSVEKYDPHTGHWTNVTPMATKRSG----------AGVALLNDHIYVVGGFDGT-AHL 221 (301)
T ss_dssp -TE--EEEECCBCS----SCBCCCEEEEETTTTEEEEECCCSSCCBS----------CEEEEETTEEEEECCBCSS-SBC
T ss_pred -CE--EEEECCCCC----CcccceEEEEeCCCCcEEeCCCCCccccc----------ceEEEECCEEEEEeCCCCC-ccc
Confidence 33 899999765 3468899999999999999 666665532 3456789999999998654 347
Q ss_pred CceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC------CceEEEeCCCCcEEEcccCCCCccccc
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVIE 459 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~~ 459 (464)
+++++||+.+++|+.++++|.++..+. +++++++||++||. +.++.||+++++|+.++.||.||..|.
T Consensus 222 ~~v~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~ 295 (301)
T 2vpj_A 222 SSVEAYNIRTDSWTTVTSMTTPRCYVG-ATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAG 295 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCE
T ss_pred ceEEEEeCCCCcEEECCCCCCccccee-EEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccce
Confidence 899999999999999999998877665 45889999999985 478999999999999999998887653
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=291.46 Aligned_cols=256 Identities=15% Similarity=0.222 Sum_probs=203.9
Q ss_pred chhhhhhccccccccccCCchH-HHHHhhccCCCCeEEEecccc------CCccccceEEeeCCCCceeeccccccCCCc
Q 046692 158 TSLMNARLVCKKWRYLTTTPRF-LQMRREGLHQNPWLFLFGAVK------DGYCSGEIHALDVSQDQWHRIDASILKGRF 230 (464)
Q Consensus 158 ~sl~~~~~vck~W~~l~~~~~f-~~~r~~~~~~~~~l~v~GG~~------~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~ 230 (464)
.++..+++..++|.. +..|.. .+........++.||++||.. .....+.++.||+.+++|..+++ +|.+|.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP-LPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC-BSSCEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC-CCcchh
Confidence 457789999999975 444321 111122336789999999962 12234569999999999999988 789999
Q ss_pred ceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCC
Q 046692 231 MFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSH 310 (464)
Q Consensus 231 ~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~ 310 (464)
.|++++++++|||+||... .......+++++|||.+++|+.+++||.+|..|++++++
T Consensus 91 ~~~~~~~~~~lyv~GG~~~--------~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-------------- 148 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREI--------KDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM-------------- 148 (315)
T ss_dssp SCEEEEETTEEEEECCEES--------STTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--------------
T ss_pred ceeEEEECCEEEEEeCCcC--------CCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC--------------
Confidence 9999999999999999531 011246789999999999999999999999999999987
Q ss_pred CCCccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCc
Q 046692 311 QDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEP 389 (464)
Q Consensus 311 ~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~ 389 (464)
++ ||++||.+. +...++.+++||+.+++|+. .++|.++.. +++++.+++||++||.+.. ..
T Consensus 149 --~~--iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~~ 210 (315)
T 4asc_A 149 --DL--VYVIGGKGS---DRKCLNKMCVYDPKKFEWKELAPMQTARSL----------FGATVHDGRIIVAAGVTDT-GL 210 (315)
T ss_dssp --TE--EEEECCBCT---TSCBCCCEEEEETTTTEEEECCCCSSCCBS----------CEEEEETTEEEEEEEECSS-SE
T ss_pred --CE--EEEEeCCCC---CCcccceEEEEeCCCCeEEECCCCCCchhc----------eEEEEECCEEEEEeccCCC-Cc
Confidence 33 899999843 34678899999999999999 666665533 3456789999999998654 45
Q ss_pred cCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC---------------CceEEEeCCCCcEEEcccCCCC
Q 046692 390 LDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET---------------DKLAGYDIERGFWIGIQTSPFP 454 (464)
Q Consensus 390 l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~---------------~~v~~YD~~~~~W~~l~~lp~p 454 (464)
++++++||+.+++|+.++++|.++..+. +++++++|||+||. +.+++||+++++|+.+ +|.|
T Consensus 211 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~ 287 (315)
T 4asc_A 211 TSSAEVYSITDNKWAPFEAFPQERSSLS-LVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREI 287 (315)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCS
T ss_pred cceEEEEECCCCeEEECCCCCCccccee-EEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCC
Confidence 7899999999999999999998887665 45889999999985 3589999999999999 5556
Q ss_pred cccc
Q 046692 455 PRVI 458 (464)
Q Consensus 455 r~~~ 458 (464)
|..+
T Consensus 288 r~~~ 291 (315)
T 4asc_A 288 AYAA 291 (315)
T ss_dssp SCCS
T ss_pred cCcc
Confidence 6543
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-35 Score=289.01 Aligned_cols=253 Identities=16% Similarity=0.226 Sum_probs=201.4
Q ss_pred hhhhhccccccccccCCch-HHHHHhhccCCCCeEEEeccccC---C---ccccceEEeeCCCCceeeccccccCCCcce
Q 046692 160 LMNARLVCKKWRYLTTTPR-FLQMRREGLHQNPWLFLFGAVKD---G---YCSGEIHALDVSQDQWHRIDASILKGRFMF 232 (464)
Q Consensus 160 l~~~~~vck~W~~l~~~~~-f~~~r~~~~~~~~~l~v~GG~~~---~---~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~ 232 (464)
+..+++..++|... ..+. ..+........++.||++||... . ...+.++.||+.+++|..+++ +|.+|..|
T Consensus 26 ~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP-LPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC-BSSCBCSC
T ss_pred eEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC-CCcccccc
Confidence 57789999999873 2221 11111223467899999999531 1 223458999999999999987 88999999
Q ss_pred EEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCC
Q 046692 233 SVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQD 312 (464)
Q Consensus 233 s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (464)
++++++++|||+||.. .......+++++||+.+++|+.+++||.+|..|++++++
T Consensus 104 ~~~~~~~~iyv~GG~~---------~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~---------------- 158 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKD---------LQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN---------------- 158 (318)
T ss_dssp EEEEETTEEEEEEEEB---------TTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET----------------
T ss_pred ceEEECCEEEEEcCcc---------CCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC----------------
Confidence 9999999999999952 112246789999999999999999999999999999876
Q ss_pred CccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccC
Q 046692 313 RRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLD 391 (464)
Q Consensus 313 gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~ 391 (464)
++ ||++||... +...++.+++||+.+++|+. .++|.++.. +++++.+++||++||.+.. ..++
T Consensus 159 ~~--iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~~~~ 222 (318)
T 2woz_A 159 GM--IYCLGGKTD---DKKCTNRVFIYNPKKGDWKDLAPMKTPRSM----------FGVAIHKGKIVIAGGVTED-GLSA 222 (318)
T ss_dssp TE--EEEECCEES---SSCBCCCEEEEETTTTEEEEECCCSSCCBS----------CEEEEETTEEEEEEEEETT-EEEE
T ss_pred CE--EEEEcCCCC---CCCccceEEEEcCCCCEEEECCCCCCCccc----------ceEEEECCEEEEEcCcCCC-Cccc
Confidence 33 899999753 24567889999999999999 666665532 3456789999999998653 3577
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC---------------CceEEEeCCCCcEEEcccCCCCcc
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET---------------DKLAGYDIERGFWIGIQTSPFPPR 456 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~---------------~~v~~YD~~~~~W~~l~~lp~pr~ 456 (464)
++++||+.+++|+.++++|.++..+. +++++++||++||. +.+++||+++++|+.+ +|.+|.
T Consensus 223 ~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~ 299 (318)
T 2woz_A 223 SVEAFDLKTNKWEVMTEFPQERSSIS-LVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRY 299 (318)
T ss_dssp EEEEEETTTCCEEECCCCSSCCBSCE-EEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGG
T ss_pred eEEEEECCCCeEEECCCCCCcccceE-EEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccc
Confidence 99999999999999999998877654 46899999999984 4689999999999999 677776
Q ss_pred cc
Q 046692 457 VI 458 (464)
Q Consensus 457 ~~ 458 (464)
.|
T Consensus 300 ~~ 301 (318)
T 2woz_A 300 AS 301 (318)
T ss_dssp GT
T ss_pred cc
Confidence 55
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=278.08 Aligned_cols=222 Identities=15% Similarity=0.204 Sum_probs=190.1
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
..+.||++||... .+++++||+.+++|..+++ +|.+|..|++++++++|||+||.. ....++++
T Consensus 10 ~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~lyv~GG~~------------~~~~~~~~ 73 (306)
T 3ii7_A 10 KHDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRC-PFEKRRDAACVFWDNVVYILGGSQ------------LFPIKRMD 73 (306)
T ss_dssp CCCEEEEEECCSS---TTSEEEEETTTTEEEECCC-CSCCCBSCEEEEETTEEEEECCBS------------SSBCCEEE
T ss_pred ccceEEEEeCCCC---CceEEEecCCCCCEecCCC-CCcccceeEEEEECCEEEEEeCCC------------CCCcceEE
Confidence 4589999999755 6789999999999999988 788999999999999999999942 24578999
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+|||.+++|+.+++||.+|..|++++++ ++ ||++||.+. ....++.+++||+.+++|+.
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~~--iyv~GG~~~---~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAAE----------------GK--IYTSGGSEV---GNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEET----------------TE--EEEECCBBT---TBSCCCCEEEEETTTTEEEE
T ss_pred EEeCCCCeEEECCCCCccccceeEEEEC----------------CE--EEEECCCCC---CCcEeeeEEEEeCCCCceEe
Confidence 9999999999999999999999999886 33 899999852 34678899999999999999
Q ss_pred -cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCC---ccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC
Q 046692 349 -SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDE---PLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG 424 (464)
Q Consensus 349 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~---~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g 424 (464)
.++|.++.. +++++.+++||++||...... .++++++||+.+++|+.+++||.++..+. ++++++
T Consensus 133 ~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~ 201 (306)
T 3ii7_A 133 KPSMLTQRCS----------HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHG-LVFVKD 201 (306)
T ss_dssp ECCCSSCCBS----------CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETT
T ss_pred CCCCcCCcce----------eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcce-EEEECC
Confidence 677765533 345678999999999865432 27899999999999999999998877665 458899
Q ss_pred EEEEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 425 IFYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 425 ~lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
+|||+||. +.+++||+.+++|+.++.+|.+|..+
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCC
T ss_pred EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccce
Confidence 99999984 58999999999999999999988755
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.2e-33 Score=278.80 Aligned_cols=228 Identities=18% Similarity=0.257 Sum_probs=192.7
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
..++.||++||. .....+++++||+.+++|..+++ +|.+|..|++++++++|||+||... ........+++
T Consensus 22 ~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~lyv~GG~~~-------~~~~~~~~~~~ 92 (308)
T 1zgk_A 22 KVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLAD-LQVPRSGLAGCVVGGLLYAVGGRNN-------SPDGNTDSSAL 92 (308)
T ss_dssp CCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCEEE-------ETTEEEECCCE
T ss_pred CCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCC-CCcccccceEEEECCEEEEECCCcC-------CCCCCeecceE
Confidence 677899999998 45567889999999999999987 7889999999999999999999520 00112356889
Q ss_pred EEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCccc
Q 046692 268 LVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (464)
Q Consensus 268 ~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~ 347 (464)
++||+.+++|+.+++||.+|..+++++++ ++ ||++||.++ ...++.+++||+.+++|+
T Consensus 93 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~~--iyv~GG~~~----~~~~~~~~~yd~~~~~W~ 150 (308)
T 1zgk_A 93 DCYNPMTNQWSPCAPMSVPRNRIGVGVID----------------GH--IYAVGGSHG----CIHHNSVERYEPERDEWH 150 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCBTCEEEEET----------------TE--EEEECCEET----TEECCCEEEEETTTTEEE
T ss_pred EEECCCCCeEeECCCCCcCccccEEEEEC----------------CE--EEEEcCCCC----CcccccEEEECCCCCeEe
Confidence 99999999999999999999999999986 33 899999764 356788999999999999
Q ss_pred c-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEE
Q 046692 348 G-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIF 426 (464)
Q Consensus 348 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~l 426 (464)
. .++|..+.. +++++.+++||++||.+.. ..++++++||+.+++|+.+++||.++..+. +++++++|
T Consensus 151 ~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i 218 (308)
T 1zgk_A 151 LVAPMLTRRIG----------VGVAVLNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTIRSGAG-VCVLHNCI 218 (308)
T ss_dssp ECCCCSSCCBS----------CEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEE
T ss_pred ECCCCCccccc----------eEEEEECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCccccce-EEEECCEE
Confidence 9 666665532 3456779999999998765 347899999999999999999999887665 45889999
Q ss_pred EEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 427 YVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 427 YViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
||+||. +.++.||+++++|+.++++|.||..+
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred EEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 999984 58999999999999999999988754
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=277.84 Aligned_cols=225 Identities=20% Similarity=0.303 Sum_probs=190.0
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
..++.||++||... ...+++++||+.+++|..+++ +|.+|..|++++++++|||+||..+ . ...+++
T Consensus 13 ~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~lyv~GG~~~---------~--~~~~~~ 79 (302)
T 2xn4_A 13 NLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAE-LPSRRCRAGMVYMAGLVFAVGGFNG---------S--LRVRTV 79 (302)
T ss_dssp --CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEESCBCS---------S--SBCCCE
T ss_pred CCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEccc-CCcccccceEEEECCEEEEEeCcCC---------C--ccccce
Confidence 45679999999764 356789999999999999987 7889999999999999999999532 1 346789
Q ss_pred EEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCccc
Q 046692 268 LVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (464)
Q Consensus 268 ~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~ 347 (464)
++||+.+++|+.+++||.+|..|++++++ + .||++||.++ ...++.+++||+.+++|+
T Consensus 80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~--~iyv~GG~~~----~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRDRRSTLGAAVLN----------------G--LLYAVGGFDG----STGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEET----------------T--EEEEEEEECS----SCEEEEEEEEETTTTEEE
T ss_pred EEECCCCCceeeCCCCCccccceEEEEEC----------------C--EEEEEcCCCC----CccCceEEEEeCCCCeEe
Confidence 99999999999999999999999999986 3 3899999864 356788999999999999
Q ss_pred c-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCC-CccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE
Q 046692 348 G-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWD-EPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI 425 (464)
Q Consensus 348 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~-~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~ 425 (464)
. .++|.++.. +++++.+++||++||..... ..++++++||+.+++|+.+++||.++..+. +++++++
T Consensus 138 ~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~ 206 (302)
T 2xn4_A 138 HVAPMNTRRSS----------VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAG-VGVLNNL 206 (302)
T ss_dssp EECCCSSCCBS----------CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTE
T ss_pred ecCCCCCcccC----------ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccccc-EEEECCE
Confidence 9 666665532 34567899999999986542 347899999999999999999998877664 4588999
Q ss_pred EEEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 426 FYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 426 lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
||++||. +.++.||+++++|+.++.+|.+|..+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC
Confidence 9999984 58999999999999999999888754
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=272.60 Aligned_cols=225 Identities=18% Similarity=0.283 Sum_probs=191.7
Q ss_pred CCCCeEEEecc-ccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccce
Q 046692 188 HQNPWLFLFGA-VKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 188 ~~~~~l~v~GG-~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
..++.||++|| .......+++++||+.+++|..+++ +|.+|..|++++++++|||+||..+ ....++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~-----------~~~~~~ 79 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPS-ITRKRRYVASVSLHDRIYVIGGYDG-----------RSRLSS 79 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCBCS-----------SCBCCC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCC-CChhhccccEEEECCEEEEEcCCCC-----------CccCce
Confidence 35789999999 5555677899999999999999997 7889999999999999999999531 135688
Q ss_pred EEEEeCCCCC---eeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCC
Q 046692 267 VLVFSPLTKS---WRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSF 343 (464)
Q Consensus 267 v~vydp~t~~---W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~ 343 (464)
+++||+.+++ |+.+++||.+|..+++++++ ++ ||++||.++ ...++.+++||+.+
T Consensus 80 ~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~----------------~~--lyv~GG~~~----~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 80 VECLDYTADEDGVWYSVAPMNVRRGLAGATTLG----------------DM--IYVSGGFDG----SRRHTSMERYDPNI 137 (301)
T ss_dssp EEEEETTCCTTCCCEEECCCSSCCBSCEEEEET----------------TE--EEEECCBCS----SCBCCEEEEEETTT
T ss_pred EEEEECCCCCCCeeEECCCCCCCccceeEEEEC----------------CE--EEEEcccCC----CcccceEEEEcCCC
Confidence 9999999999 99999999999999999986 33 899999864 34578899999999
Q ss_pred Ccccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE
Q 046692 344 DGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC 422 (464)
Q Consensus 344 n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~ 422 (464)
++|+. .++|..+.. +++++.+++||++||.+.. ..++++++||+.+++|+.++++|.++..+. ++++
T Consensus 138 ~~W~~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~ 205 (301)
T 2vpj_A 138 DQWSMLGDMQTAREG----------AGLVVASGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVTPMATKRSGAG-VALL 205 (301)
T ss_dssp TEEEEEEECSSCCBS----------CEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE
T ss_pred CeEEECCCCCCCccc----------ceEEEECCEEEEECCCCCC-cccceEEEEeCCCCcEEeCCCCCcccccce-EEEE
Confidence 99999 666655432 3456779999999998654 467899999999999999999998887665 4588
Q ss_pred CCEEEEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 423 NGIFYVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 423 ~g~lYViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
+++|||+||. +.++.||+++++|+.++.+|.||..|
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccce
Confidence 9999999984 58999999999999999999988755
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.6e-33 Score=273.64 Aligned_cols=229 Identities=18% Similarity=0.190 Sum_probs=185.6
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
.++.||++|| +++++|||.+++|...+.+.|.+|..|++++++++|||+||.... .+.......++++
T Consensus 3 ~~~~l~~~GG-------~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~~~~ 70 (315)
T 4asc_A 3 LQDLIFMISE-------EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYN-----EDNKEDPMSAYFL 70 (315)
T ss_dssp CEEEEEEEET-------TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEEC-----SSCSSSCEEEEEE
T ss_pred cceEEEEEcC-------CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccC-----CCCCccccccceE
Confidence 3468999999 479999999999987332235689999999999999999995210 0111123456799
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+|||.+++|+.+++||.+|..|++++++ + .||++||.+.. .+...++.+++||+.+++|+.
T Consensus 71 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~--~lyv~GG~~~~-~~~~~~~~~~~~d~~~~~W~~ 131 (315)
T 4asc_A 71 QFDHLDSEWLGMPPLPSPRCLFGLGEAL----------------N--SIYVVGGREIK-DGERCLDSVMCYDRLSFKWGE 131 (315)
T ss_dssp EEETTTTEEEECCCBSSCEESCEEEEET----------------T--EEEEECCEESS-TTCCBCCCEEEEETTTTEEEE
T ss_pred EecCCCCeEEECCCCCcchhceeEEEEC----------------C--EEEEEeCCcCC-CCCcccceEEEECCCCCcEeE
Confidence 9999999999999999999999999986 3 38999996421 124678899999999999999
Q ss_pred -cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEE
Q 046692 349 -SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFY 427 (464)
Q Consensus 349 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lY 427 (464)
.++|.++.. +++++.+++||++||.+.....++++++||+.+++|+.+++||.++..+. +++++++||
T Consensus 132 ~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~iy 200 (315)
T 4asc_A 132 SDPLPYVVYG----------HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG-ATVHDGRII 200 (315)
T ss_dssp CCCCSSCCBS----------CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEE
T ss_pred CCCCCCcccc----------eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceE-EEEECCEEE
Confidence 667665533 34567899999999985555678999999999999999999999887765 458899999
Q ss_pred EEeCC------CceEEEeCCCCcEEEcccCCCCccccc
Q 046692 428 VYSET------DKLAGYDIERGFWIGIQTSPFPPRVIE 459 (464)
Q Consensus 428 ViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~~ 459 (464)
|+||. +.+++||+++++|+.++++|.||..|.
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 238 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS 238 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred EEeccCCCCccceEEEEECCCCeEEECCCCCCccccee
Confidence 99985 379999999999999999999987653
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-32 Score=268.88 Aligned_cols=228 Identities=14% Similarity=0.168 Sum_probs=183.3
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
...+.||++||. .+++|||.+++|...+.+.+.+|..|++++++++|||+||.... .+.......+++
T Consensus 13 ~~~~~i~~~GG~-------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~-----~~~~~~~~~~~~ 80 (318)
T 2woz_A 13 FVKDLILLVNDT-------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVD-----EENKDQPLQSYF 80 (318)
T ss_dssp SEEEEEEEECSS-------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC------------CCCBEE
T ss_pred eecchhhhcccc-------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccC-----ccccCCCccccE
Confidence 345789999993 47999999999999543345789999999999999999995210 001111234569
Q ss_pred EEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCccc
Q 046692 268 LVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (464)
Q Consensus 268 ~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~ 347 (464)
++|||.+++|+.+++||.+|..|++++++ + .||++||... .....++.+++||+.+++|+
T Consensus 81 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----------------~--~iyv~GG~~~--~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPSARCLFGLGEVD----------------D--KIYVVAGKDL--QTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp EEEETTTTEEEECSCBSSCBCSCEEEEET----------------T--EEEEEEEEBT--TTCCEEEEEEEEETTTTEEE
T ss_pred EEEeCCCCcEEECCCCCccccccceEEEC----------------C--EEEEEcCccC--CCCcccceEEEEeCCCCCEe
Confidence 99999999999999999999999999986 3 3899999752 12456788999999999999
Q ss_pred c-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEE
Q 046692 348 G-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIF 426 (464)
Q Consensus 348 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~l 426 (464)
. .++|.++.. +++++.+++||++||.......++++++||+.+++|+.++++|.++..+. +++++++|
T Consensus 141 ~~~~~p~~r~~----------~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i 209 (318)
T 2woz_A 141 EVKNLPIKVYG----------HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFG-VAIHKGKI 209 (318)
T ss_dssp EECCCSSCEES----------CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEE
T ss_pred ECCCCCCcccc----------cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccce-EEEECCEE
Confidence 9 666665432 34566899999999985544568899999999999999999998887665 45889999
Q ss_pred EEEeCC------CceEEEeCCCCcEEEcccCCCCcccc
Q 046692 427 YVYSET------DKLAGYDIERGFWIGIQTSPFPPRVI 458 (464)
Q Consensus 427 YViGG~------~~v~~YD~~~~~W~~l~~lp~pr~~~ 458 (464)
||+||. +.+++||+++++|+.++++|.||..|
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 247 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI 247 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC
T ss_pred EEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence 999984 47899999999999999999988755
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=6.6e-32 Score=271.23 Aligned_cols=233 Identities=15% Similarity=0.079 Sum_probs=179.6
Q ss_pred CCCCeEEEeccccCCccccceEEeeCC--CCceeecccccc-CCCcceEEEEECCEEEEEcCCcCCccCccccCCCcccc
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVS--QDQWHRIDASIL-KGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTH 264 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~--t~~W~~l~~~~~-~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~ 264 (464)
..++.||++||... +++++||+. +++|..+++ +| .+|..|++++++++|||+||... .........
T Consensus 17 ~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~~~~lyv~GG~~~------~~~~~~~~~ 85 (357)
T 2uvk_A 17 IDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFIDGNLYVFGGIGK------NSEGLTQVF 85 (357)
T ss_dssp EETTEEEEECGGGT----TCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEETTEEEEECCEEE------CTTSCEEEC
T ss_pred EECCEEEEEeCcCC----CeEEEEccccCCCCeeECCC-CCCCcCccceEEEECCEEEEEcCCCC------CCCccceee
Confidence 45899999999753 479999998 499999998 66 89999999999999999999510 001122457
Q ss_pred ceEEEEeCCCCCeeecCCCC-CCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCC---------------
Q 046692 265 KGVLVFSPLTKSWRKVASMR-YARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYE--------------- 328 (464)
Q Consensus 265 ~~v~vydp~t~~W~~l~~m~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~--------------- 328 (464)
+++++|||.+++|+.+++|+ .+|..+++++++ ++ ||++||.++...
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~----------------~~--iyv~GG~~~~~~~~~~~~~~~~~~~~~ 147 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHN----------------GK--AYVTGGVNQNIFNGYFEDLNEAGKDST 147 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEEET----------------TE--EEEEECCCHHHHHHHHHHHHHHTTCHH
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEEEC----------------CE--EEEEeCcCCCcCcccccchhhcCCccc
Confidence 89999999999999999998 999999888876 33 899999753100
Q ss_pred ---------------CccccccceeeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCc
Q 046692 329 ---------------DPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDS 392 (464)
Q Consensus 329 ---------------~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~ 392 (464)
....++.+++||+.+++|+. .++|..+... +++++.+++||++||........+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~---------~~~~~~~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 148 AIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAG---------AAVVNKGDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBS---------CEEEEETTEEEEECCEEETTEECCC
T ss_pred chhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCccc---------ccEEEECCEEEEEeeecCCCcccCc
Confidence 00246889999999999998 6666433211 3456789999999998544345778
Q ss_pred eEEEeC--CCCcEEEeccCCCCCCcce-EEeEECCEEEEEeCC-----------------------CceEEEeCCCCcEE
Q 046692 393 GEIYDS--VSNKWMEIQRLPVDFGVVS-SGVVCNGIFYVYSET-----------------------DKLAGYDIERGFWI 446 (464)
Q Consensus 393 vevYD~--~t~~W~~v~~~p~~~~~~~-~~v~~~g~lYViGG~-----------------------~~v~~YD~~~~~W~ 446 (464)
+++||+ .+++|+.+++||.++.... ++++++++|||+||. +.+++||+++++|+
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 999976 9999999999987765433 356899999999983 36899999999999
Q ss_pred EcccCCCCcccc
Q 046692 447 GIQTSPFPPRVI 458 (464)
Q Consensus 447 ~l~~lp~pr~~~ 458 (464)
.++.+|.||..|
T Consensus 299 ~~~~~p~~r~~~ 310 (357)
T 2uvk_A 299 KSGELSQGRAYG 310 (357)
T ss_dssp EEEECSSCCBSS
T ss_pred eCCCCCCCcccc
Confidence 999999998755
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3.9e-31 Score=265.59 Aligned_cols=264 Identities=14% Similarity=0.108 Sum_probs=187.9
Q ss_pred hhhhhhcc--ccccccccCCchHHHHHhhccCCCCeEEEeccc-c----CCccccceEEeeCCCCceeeccccccCCCcc
Q 046692 159 SLMNARLV--CKKWRYLTTTPRFLQMRREGLHQNPWLFLFGAV-K----DGYCSGEIHALDVSQDQWHRIDASILKGRFM 231 (464)
Q Consensus 159 sl~~~~~v--ck~W~~l~~~~~f~~~r~~~~~~~~~l~v~GG~-~----~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~ 231 (464)
+++.+++. .++|..+..+|...+........++.||++||. . .....+++++||+.+++|.++++++|.+|..
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~ 111 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG 111 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc
Confidence 45667776 489999987762111112223678999999998 3 1245789999999999999999844599999
Q ss_pred eEEEEECCEEEEEcCCcCCccCc-----------------------cccCCCccccceEEEEeCCCCCeeecCCCCCCcc
Q 046692 232 FSVVSIMDDVYVVGGCSSLTSFG-----------------------RVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARS 288 (464)
Q Consensus 232 ~s~~~~~~~IYVvGG~~gl~~~~-----------------------~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~ 288 (464)
|++++++++|||+||..+...-+ ..........+++++|||.+++|+.+++||.+|.
T Consensus 112 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~ 191 (357)
T 2uvk_A 112 HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT 191 (357)
T ss_dssp EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC
T ss_pred ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc
Confidence 99999999999999954210000 0000001235799999999999999999998765
Q ss_pred c-cEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeec--CCCcccc-cCCCCCCccceecccc
Q 046692 289 M-PILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRN--SFDGFEG-SLLPNRKSYKFIRQKS 364 (464)
Q Consensus 289 ~-~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp--~~n~W~~-~~l~~~~~~~~~~~~~ 364 (464)
. +++++++ ++ ||++||.++ .....+.++.||. .+++|+. .+++.++..
T Consensus 192 ~~~~~~~~~----------------~~--iyv~GG~~~---~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~------- 243 (357)
T 2uvk_A 192 AGAAVVNKG----------------DK--TWLINGEAK---PGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV------- 243 (357)
T ss_dssp BSCEEEEET----------------TE--EEEECCEEE---TTEECCCEEEEECC---CEEEECCCSSTTTCC-------
T ss_pred ccccEEEEC----------------CE--EEEEeeecC---CCcccCceEEEEecCCCCcEEecCCCCCCccc-------
Confidence 5 8888876 33 899999754 1245677888875 8999998 566544321
Q ss_pred cccccccccCcEEEEEcCCCCC----------------CCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEE
Q 046692 365 DQSITKASKRFVLIAVGGLGSW----------------DEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYV 428 (464)
Q Consensus 365 ~~~~~~~~~~~~iyviGG~~~~----------------~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYV 428 (464)
+.+++++.+++||++||.... ...+.++++||+.+++|+.+++||.++..+. +++++++|||
T Consensus 244 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v 321 (357)
T 2uvk_A 244 -AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGV-SLPWNNSLLI 321 (357)
T ss_dssp -BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSE-EEEETTEEEE
T ss_pred -ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccce-eEEeCCEEEE
Confidence 124567889999999996321 1234689999999999999999999887654 4689999999
Q ss_pred EeCC-------CceEEEeCCCCcEEEcccCC
Q 046692 429 YSET-------DKLAGYDIERGFWIGIQTSP 452 (464)
Q Consensus 429 iGG~-------~~v~~YD~~~~~W~~l~~lp 452 (464)
+||. ++|+.|+.++++|.+...+|
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 9984 37899999999999988765
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=2.5e-30 Score=282.78 Aligned_cols=215 Identities=14% Similarity=0.116 Sum_probs=173.4
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCceeecc-c----cccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCC
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRID-A----SILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSS 260 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~-~----~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~ 260 (464)
..++.||++||... ...+++++||+.+++|..++ + .+|.+|..|+++++ +++|||+||..+ .
T Consensus 395 ~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~---------~- 463 (695)
T 2zwa_A 395 VAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA---------P- 463 (695)
T ss_dssp ECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS---------T-
T ss_pred EECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC---------C-
Confidence 36899999999876 67789999999999999998 4 26889999999999 999999999532 1
Q ss_pred ccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeee
Q 046692 261 FKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYR 340 (464)
Q Consensus 261 ~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Yd 340 (464)
....+++|+||+.+++|+.+++||.+|..|+++++.+ ++ ||++||.++ .. .+++||
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~---------------~~--iyv~GG~~~-----~~--~v~~yd 519 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPD---------------GN--VLILGGVTE-----GP--AMLLYN 519 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTT---------------SC--EEEECCBCS-----SC--SEEEEE
T ss_pred CCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcC---------------CE--EEEECCCCC-----CC--CEEEEE
Confidence 1257889999999999999999999999999999631 33 899999865 11 899999
Q ss_pred cCCCcccc-cC---CCCCCccceecccccccccccccC---cEEEEEcCCCCCC-CccCceEEEeCCCCc------EEEe
Q 046692 341 NSFDGFEG-SL---LPNRKSYKFIRQKSDQSITKASKR---FVLIAVGGLGSWD-EPLDSGEIYDSVSNK------WMEI 406 (464)
Q Consensus 341 p~~n~W~~-~~---l~~~~~~~~~~~~~~~~~~~~~~~---~~iyviGG~~~~~-~~l~~vevYD~~t~~------W~~v 406 (464)
+.+++|+. .+ +|.++.. +++++++ ++||++||..... ..++++++||+.+++ |+.+
T Consensus 520 ~~t~~W~~~~~~g~~p~~r~~----------~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 520 VTEEIFKDVTPKDEFFQNSLV----------SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK 589 (695)
T ss_dssp TTTTEEEECCCSSGGGGSCCB----------SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred CCCCceEEccCCCCCCCcccc----------eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence 99999998 33 4444322 2334445 8999999985432 557899999999999 9999
Q ss_pred ccCC-CCCCcceEEeEEC-CEEEEEeCC---------CceEEEeCCCCcEEEc
Q 046692 407 QRLP-VDFGVVSSGVVCN-GIFYVYSET---------DKLAGYDIERGFWIGI 448 (464)
Q Consensus 407 ~~~p-~~~~~~~~~v~~~-g~lYViGG~---------~~v~~YD~~~~~W~~l 448 (464)
.++| .++..+. +++++ ++|||+||. +.++.||+.+++|+.+
T Consensus 590 ~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 590 LQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp EECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC
T ss_pred CCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe
Confidence 8764 5555554 45778 999999983 5799999999999954
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=6e-28 Score=262.45 Aligned_cols=261 Identities=11% Similarity=0.072 Sum_probs=192.6
Q ss_pred hhhhhccccccccccCCchHHHHHhhcc-CC-CCeEEEeccccCCc------cccceEEeeCCCCceeeccccccCCCcc
Q 046692 160 LMNARLVCKKWRYLTTTPRFLQMRREGL-HQ-NPWLFLFGAVKDGY------CSGEIHALDVSQDQWHRIDASILKGRFM 231 (464)
Q Consensus 160 l~~~~~vck~W~~l~~~~~f~~~r~~~~-~~-~~~l~v~GG~~~~~------~~~~v~~yD~~t~~W~~l~~~~~~~R~~ 231 (464)
+..+++...+|..++.+|.. ....+ .. ++.||++||..... ....+++||+.+++|..++. ++.+|..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~---~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~-~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV---PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV-TVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC---CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE-EECSCCC
T ss_pred cccCCCCCCeeeeeccCCCC---ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc-cCCCCCC
Confidence 56678889999998877751 11222 22 88999999975421 23478999999999999987 6777766
Q ss_pred eE--EE-EECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccC
Q 046692 232 FS--VV-SIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQ 308 (464)
Q Consensus 232 ~s--~~-~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~ 308 (464)
|+ ++ ..+++|||+||+. . .++++|||.+++|+++++|+.+|..|+++++.+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~---------~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d----------- 297 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGND---------A------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD----------- 297 (656)
T ss_dssp SSCEEEECTTSCEEEECSSS---------T------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT-----------
T ss_pred ccccccCCCCCCEEEeCCCC---------C------CceEEecCcCCceeECCCCCccccccceEEecC-----------
Confidence 64 33 3589999999942 1 269999999999999999999999999998821
Q ss_pred CCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc------cCCCCCCcccee----------------------
Q 046692 309 SHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG------SLLPNRKSYKFI---------------------- 360 (464)
Q Consensus 309 ~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~------~~l~~~~~~~~~---------------------- 360 (464)
+| ||++||... +...++.+++||+.+++|+. .+++..+.....
T Consensus 298 ----g~--iyv~GG~~~---~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~ 368 (656)
T 1k3i_A 298 ----GR--VFTIGGSWS---GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPS 368 (656)
T ss_dssp ----SC--EEEECCCCC---SSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSS
T ss_pred ----Ce--EEEEeCccc---CCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCc
Confidence 33 899999522 23467899999999999997 233333211100
Q ss_pred -----------------cccc--------ccccccc---ccCcEEEEEcCCCCC--CCccC---ceEEEeCCCCcEEEec
Q 046692 361 -----------------RQKS--------DQSITKA---SKRFVLIAVGGLGSW--DEPLD---SGEIYDSVSNKWMEIQ 407 (464)
Q Consensus 361 -----------------~~~~--------~~~~~~~---~~~~~iyviGG~~~~--~~~l~---~vevYD~~t~~W~~v~ 407 (464)
..+. .....++ ..+++||++||.... ...++ .+++||+.+++|+.+.
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 0000 0111222 358999999997432 12344 7899999999999987
Q ss_pred --cCCCCCCcceEEeEECCEEEEEeCC------------CceEEEeCCCCcEEEcccCCCCccccc
Q 046692 408 --RLPVDFGVVSSGVVCNGIFYVYSET------------DKLAGYDIERGFWIGIQTSPFPPRVIE 459 (464)
Q Consensus 408 --~~p~~~~~~~~~v~~~g~lYViGG~------------~~v~~YD~~~~~W~~l~~lp~pr~~~~ 459 (464)
+||.+|..+.+++..+|+|||+||. +.++.||+.+++|+.++.+|.||..|.
T Consensus 449 ~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs 514 (656)
T 1k3i_A 449 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS 514 (656)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTE
T ss_pred cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccccc
Confidence 8998887766543349999999983 478999999999999999999998774
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=2.5e-25 Score=243.21 Aligned_cols=231 Identities=15% Similarity=0.145 Sum_probs=168.8
Q ss_pred chhhhhhcccccccccc-CCc--hHHHHHhhc--cCC--CCeEEEeccccCCc-cccceEEeeCCCCceeeccccccCCC
Q 046692 158 TSLMNARLVCKKWRYLT-TTP--RFLQMRREG--LHQ--NPWLFLFGAVKDGY-CSGEIHALDVSQDQWHRIDASILKGR 229 (464)
Q Consensus 158 ~sl~~~~~vck~W~~l~-~~~--~f~~~r~~~--~~~--~~~l~v~GG~~~~~-~~~~v~~yD~~t~~W~~l~~~~~~~R 229 (464)
.+++.+++..++|..+. ..| ..+..|..+ ... ++.||++||..... ..++++.||+.+++|..+++ +|.+|
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~-~p~~R 490 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS-LSHTR 490 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCC-CSBCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCC-CCCCc
Confidence 34667888889999887 421 111133222 245 89999999987543 67899999999999999988 88999
Q ss_pred cceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC---CCCCccccEEEEecCCCcccccc
Q 046692 230 FMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS---MRYARSMPILGISEVSPEFSIIP 305 (464)
Q Consensus 230 ~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~---m~~~R~~~~~~~~~~~~~~~~~~ 305 (464)
..|+++++ +++|||+||.. ... ++++||+.+++|+.+++ +|.+|..+++++++...
T Consensus 491 ~~h~~~~~~~~~iyv~GG~~---------~~~-----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~------ 550 (695)
T 2zwa_A 491 FRHSACSLPDGNVLILGGVT---------EGP-----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS------ 550 (695)
T ss_dssp BSCEEEECTTSCEEEECCBC---------SSC-----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT------
T ss_pred ccceEEEEcCCEEEEECCCC---------CCC-----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC------
Confidence 99999997 99999999953 211 89999999999999987 89999999977765321
Q ss_pred ccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCc------ccc-cCCC-CCCccceecccccccccccccC-cE
Q 046692 306 CHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG------FEG-SLLP-NRKSYKFIRQKSDQSITKASKR-FV 376 (464)
Q Consensus 306 ~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~------W~~-~~l~-~~~~~~~~~~~~~~~~~~~~~~-~~ 376 (464)
+ .||++||.+.. +...++.+++||+.+++ |+. .++| ..+. .+++++++ ++
T Consensus 551 -------~--~iyv~GG~~~~--~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~----------~~~~~~~~~~~ 609 (695)
T 2zwa_A 551 -------K--QGIILGGGFMD--QTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY----------GSQIKYITPRK 609 (695)
T ss_dssp -------T--EEEEECCBCTT--SSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB----------SCEEEEEETTE
T ss_pred -------C--EEEEECCcCCC--CCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc----------cceEEEeCCCE
Confidence 2 38999997531 13567899999999999 665 3322 2221 13456777 99
Q ss_pred EEEEcCCCCCC--CccCceEEEeCCCCcEEEeccCCCC--------CCcceEEeEEC-CEEEEEeCC
Q 046692 377 LIAVGGLGSWD--EPLDSGEIYDSVSNKWMEIQRLPVD--------FGVVSSGVVCN-GIFYVYSET 432 (464)
Q Consensus 377 iyviGG~~~~~--~~l~~vevYD~~t~~W~~v~~~p~~--------~~~~~~~v~~~-g~lYViGG~ 432 (464)
||++||.+... ...+++++||+.+++|+.+ ++|.. +..+++ ++++ |+|||+||.
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~-~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSL-VSTSMGTIHIIGGG 674 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEE-ECC---CEEEECCE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeE-EEeCCCEEEEEeCC
Confidence 99999986442 3578999999999999965 33321 222333 3444 499999983
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=3e-23 Score=225.40 Aligned_cols=242 Identities=17% Similarity=0.100 Sum_probs=170.6
Q ss_pred hhhhhhccccccccccCCchHHHHHhhc--cCCCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE
Q 046692 159 SLMNARLVCKKWRYLTTTPRFLQMRREG--LHQNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS 236 (464)
Q Consensus 159 sl~~~~~vck~W~~l~~~~~f~~~r~~~--~~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~ 236 (464)
.+..+++..++|..+..++.....+... ...++.||++||.... .+++||+.+++|.++++ |+.+|..|++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~ 294 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPD-MQVARGYQSSAT 294 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCC-CSSCCSSCEEEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCC-CCccccccceEE
Confidence 5677899999999887665421111111 1467999999997543 69999999999999987 889999999999
Q ss_pred E-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeec-----CCCCCCccccEEEEecCCCccccc------
Q 046692 237 I-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKV-----ASMRYARSMPILGISEVSPEFSII------ 304 (464)
Q Consensus 237 ~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l-----~~m~~~R~~~~~~~~~~~~~~~~~------ 304 (464)
+ +++|||+||.. ++ ....+++++|||.+++|+.+ ++|+.+|.. +++..+ ++.-++
T Consensus 295 ~~dg~iyv~GG~~--------~~--~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~--~~iyv~Gg~~g~ 361 (656)
T 1k3i_A 295 MSDGRVFTIGGSW--------SG--GVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSD--NHAWLFGWKKGS 361 (656)
T ss_dssp CTTSCEEEECCCC--------CS--SSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTT--CSCCEEECGGGC
T ss_pred ecCCeEEEEeCcc--------cC--CcccccceEeCCCCCcceeCCCcccccccccccc-ceeecC--CceEEEECCCCc
Confidence 9 99999999942 11 12567899999999999997 456655432 110000 000000
Q ss_pred --------------------------------------cccCC---CCCCccceEEecCcCCCCCCccccc---cceeee
Q 046692 305 --------------------------------------PCHQS---HQDRRFPRSRLGGVSDVYEDPHRLS---LRRQYR 340 (464)
Q Consensus 305 --------------------------------------~~~~~---~~~gk~~iyviGG~~~~~~~~~~l~---~ve~Yd 340 (464)
.+... ..++| ||++||... +.+...++ .+++||
T Consensus 362 ~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~--i~v~GG~~~-~~~~~~~~~~~~v~~yd 438 (656)
T 1k3i_A 362 VFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK--ILTFGGSPD-YQDSDATTNAHIITLGE 438 (656)
T ss_dssp EEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE--EEEECCBSS-SSSSBCCCCEEEEECCS
T ss_pred EEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCe--EEEEeCCCC-CCCCCcCCcceEEEcCC
Confidence 00000 12455 899999753 11223344 788999
Q ss_pred cCCCcccc-c--CCCCCCccceeccccccccccccc-CcEEEEEcCCCCC-----CCccCceEEEeCCCCcEEEeccCCC
Q 046692 341 NSFDGFEG-S--LLPNRKSYKFIRQKSDQSITKASK-RFVLIAVGGLGSW-----DEPLDSGEIYDSVSNKWMEIQRLPV 411 (464)
Q Consensus 341 p~~n~W~~-~--~l~~~~~~~~~~~~~~~~~~~~~~-~~~iyviGG~~~~-----~~~l~~vevYD~~t~~W~~v~~~p~ 411 (464)
+.+++|+. . +||..+.. +++++. +++||++||.+.. ...+.++++|||.+++|+.+++++.
T Consensus 439 ~~~~~W~~~~~~~mp~~R~~----------~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~ 508 (656)
T 1k3i_A 439 PGTSPNTVFASNGLYFARTF----------HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 508 (656)
T ss_dssp TTSCCEEEECTTCCSSCCBS----------CEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS
T ss_pred CCCCCeeEEccCCCCCCccc----------CCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC
Confidence 99999997 4 67766543 233444 9999999997421 2457899999999999999999999
Q ss_pred CCCcceEEeEE--CCEEEEEeCC
Q 046692 412 DFGVVSSGVVC--NGIFYVYSET 432 (464)
Q Consensus 412 ~~~~~~~~v~~--~g~lYViGG~ 432 (464)
+|..++++ ++ +|+|||+||.
T Consensus 509 ~R~~hs~a-~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 509 VRVYHSIS-LLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCTTEEE-EECTTSCEEEEECC
T ss_pred ccccccHh-hcCCCcEEEecCCC
Confidence 88877654 55 9999999984
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.83 E-value=0.00053 Score=69.27 Aligned_cols=36 Identities=42% Similarity=0.576 Sum_probs=31.4
Q ss_pred CCChHH----HHHHHHhhCCcchhhhhhccccccccccCC
Q 046692 141 IFLPDD----ILEMCLVRLPLTSLMNARLVCKKWRYLTTT 176 (464)
Q Consensus 141 ~~lp~d----l~~~iL~rLp~~sl~~~~~vck~W~~l~~~ 176 (464)
..||++ |+..||++|+..+|.++..||++|+.++..
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSD 51 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 457888 999999999999999999999999866643
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.79 E-value=0.0017 Score=65.44 Aligned_cols=42 Identities=24% Similarity=0.443 Sum_probs=36.7
Q ss_pred cCCCCChHHHHHHHHhhCCcchhhhhhccccccccccCCchH
Q 046692 138 RMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRYLTTTPRF 179 (464)
Q Consensus 138 rl~~~lp~dl~~~iL~rLp~~sl~~~~~vck~W~~l~~~~~f 179 (464)
.+...||++++..||++|+..++.++..+|++|+.++..+.+
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~ 58 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLL 58 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhH
Confidence 566789999999999999999999999999999887765543
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.43 E-value=0.0061 Score=61.52 Aligned_cols=38 Identities=18% Similarity=0.280 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHHhhCCcchhhhhhccccccccccCC
Q 046692 139 MHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRYLTTT 176 (464)
Q Consensus 139 l~~~lp~dl~~~iL~rLp~~sl~~~~~vck~W~~l~~~ 176 (464)
+...||++++..||+.|+..+|.++..||++|+.++..
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 44568999999999999999999999999999998876
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=97.11 E-value=0.00018 Score=50.68 Aligned_cols=42 Identities=29% Similarity=0.436 Sum_probs=37.0
Q ss_pred CCCCChHHHHHHHHhhCCcchhhhhhccccccccccCCchHH
Q 046692 139 MHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRYLTTTPRFL 180 (464)
Q Consensus 139 l~~~lp~dl~~~iL~rLp~~sl~~~~~vck~W~~l~~~~~f~ 180 (464)
.+..||+|++..||++|+..++.++..|||+|+.++..+.+.
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 356799999999999999999999999999999998877643
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.00 E-value=0.096 Score=50.63 Aligned_cols=185 Identities=9% Similarity=-0.105 Sum_probs=105.6
Q ss_pred ccceEEeeCCCCceeeccc----cccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCe-ee
Q 046692 205 SGEIHALDVSQDQWHRIDA----SILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSW-RK 279 (464)
Q Consensus 205 ~~~v~~yD~~t~~W~~l~~----~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W-~~ 279 (464)
...+..||+.++++..--. ..+.+.....++..++++||... ..+.+.++|+.|.+- ..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~----------------~~~~v~viD~~t~~~~~~ 79 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN----------------NSHVIFAIDINTFKEVGR 79 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG----------------GGTEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc----------------CCCEEEEEECcccEEEEE
Confidence 4578999999998764210 01222334566778999999976 134689999999876 33
Q ss_pred cCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccc
Q 046692 280 VASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYK 358 (464)
Q Consensus 280 l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~ 358 (464)
++....|+ .+++..+ ++ +|+.... ...+.++|+.+.+-.. .+.......
T Consensus 80 i~~~~~p~---~i~~~~~---------------g~--lyv~~~~---------~~~v~~iD~~t~~~~~~i~~g~~~~~- 129 (328)
T 3dsm_A 80 ITGFTSPR---YIHFLSD---------------EK--AYVTQIW---------DYRIFIINPKTYEITGYIECPDMDME- 129 (328)
T ss_dssp EECCSSEE---EEEEEET---------------TE--EEEEEBS---------CSEEEEEETTTTEEEEEEECTTCCTT-
T ss_pred cCCCCCCc---EEEEeCC---------------Ce--EEEEECC---------CCeEEEEECCCCeEEEEEEcCCcccc-
Confidence 54333232 2333221 32 7777632 2456788888776432 111110000
Q ss_pred eecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeC-C-----
Q 046692 359 FIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-T----- 432 (464)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG-~----- 432 (464)
.......+..+++||+..-. .-+.+.++|+.+++....-+... .-......-+|++|+... .
T Consensus 130 -----~~~p~~i~~~~~~lyv~~~~-----~~~~v~viD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 130 -----SGSTEQMVQYGKYVYVNCWS-----YQNRILKIDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp -----TCBCCCEEEETTEEEEEECT-----TCCEEEEEETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred -----CCCcceEEEECCEEEEEcCC-----CCCEEEEEECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCc
Confidence 00002233467899998521 12478999999987544322221 111222234689998753 2
Q ss_pred -----CceEEEeCCCCcEEE
Q 046692 433 -----DKLAGYDIERGFWIG 447 (464)
Q Consensus 433 -----~~v~~YD~~~~~W~~ 447 (464)
+.|.++|+.+++...
T Consensus 198 ~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEE
T ss_pred cccCCceEEEEECCCCeEEE
Confidence 579999999887653
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.91 E-value=0.17 Score=48.79 Aligned_cols=192 Identities=10% Similarity=-0.064 Sum_probs=106.8
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCce-eeccccccCCCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccce
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQW-HRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W-~~l~~~~~~~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
.++.+|+... ..+.+..+|+.+.+- ..++. ... ...++. .++++||.... .+.
T Consensus 52 ~~~~lyv~~~-----~~~~v~viD~~t~~~~~~i~~-~~~---p~~i~~~~~g~lyv~~~~----------------~~~ 106 (328)
T 3dsm_A 52 RDGIGWIVVN-----NSHVIFAIDINTFKEVGRITG-FTS---PRYIHFLSDEKAYVTQIW----------------DYR 106 (328)
T ss_dssp ETTEEEEEEG-----GGTEEEEEETTTCCEEEEEEC-CSS---EEEEEEEETTEEEEEEBS----------------CSE
T ss_pred ECCEEEEEEc-----CCCEEEEEECcccEEEEEcCC-CCC---CcEEEEeCCCeEEEEECC----------------CCe
Confidence 3566777654 235689999998876 34432 222 234444 68899999741 246
Q ss_pred EEEEeCCCCCeee-cCCCCCC----ccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeec
Q 046692 267 VLVFSPLTKSWRK-VASMRYA----RSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRN 341 (464)
Q Consensus 267 v~vydp~t~~W~~-l~~m~~~----R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp 341 (464)
+.++|+.+++-.. ++ .... .....+++.+ + .+|+..- ...+.+.++|+
T Consensus 107 v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~~~----------------~--~lyv~~~--------~~~~~v~viD~ 159 (328)
T 3dsm_A 107 IFIINPKTYEITGYIE-CPDMDMESGSTEQMVQYG----------------K--YVYVNCW--------SYQNRILKIDT 159 (328)
T ss_dssp EEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEEET----------------T--EEEEEEC--------TTCCEEEEEET
T ss_pred EEEEECCCCeEEEEEE-cCCccccCCCcceEEEEC----------------C--EEEEEcC--------CCCCEEEEEEC
Confidence 8999999987432 22 1110 0222333322 2 2677742 11346778999
Q ss_pred CCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCc----cCceEEEeCCCCcEEEeccCCCCCCcc
Q 046692 342 SFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEP----LDSGEIYDSVSNKWMEIQRLPVDFGVV 416 (464)
Q Consensus 342 ~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~----l~~vevYD~~t~~W~~v~~~p~~~~~~ 416 (464)
.+++... .+..... . ......++++|+.......... ...+.++|+.+++....-.++... ..
T Consensus 160 ~t~~~~~~i~~g~~p-~----------~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~-~p 227 (328)
T 3dsm_A 160 ETDKVVDELTIGIQP-T----------SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD-WP 227 (328)
T ss_dssp TTTEEEEEEECSSCB-C----------CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC-CC
T ss_pred CCCeEEEEEEcCCCc-c----------ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC-Cc
Confidence 8877544 1111100 0 1112345788887643211011 257999999998765433343221 12
Q ss_pred eEEeEE--CCEEEEEeCCCceEEEeCCCCcEE
Q 046692 417 SSGVVC--NGIFYVYSETDKLAGYDIERGFWI 446 (464)
Q Consensus 417 ~~~v~~--~g~lYViGG~~~v~~YD~~~~~W~ 446 (464)
...+.. ++.||+..+ .|..||+.+++..
T Consensus 228 ~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp EEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred eeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 222233 567888865 8999999887753
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.68 E-value=0.12 Score=48.20 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=48.9
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
.++.||+-.|..+ .+.+..+|+.+++-..--. ++..-++.+++..+++||++... .+.++
T Consensus 29 ~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~-l~~~~fgeGi~~~~~~ly~ltw~----------------~~~v~ 88 (243)
T 3mbr_X 29 LRGHLYESTGETG---RSSVRKVDLETGRILQRAE-VPPPYFGAGIVAWRDRLIQLTWR----------------NHEGF 88 (243)
T ss_dssp ETTEEEEEECCTT---SCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESS----------------SSEEE
T ss_pred ECCEEEEECCCCC---CceEEEEECCCCCEEEEEe-CCCCcceeEEEEeCCEEEEEEee----------------CCEEE
Confidence 3467888777543 2468899999988765433 44445667788899999999762 35689
Q ss_pred EEeCCCCC
Q 046692 269 VFSPLTKS 276 (464)
Q Consensus 269 vydp~t~~ 276 (464)
+||+.|.+
T Consensus 89 v~D~~tl~ 96 (243)
T 3mbr_X 89 VYDLATLT 96 (243)
T ss_dssp EEETTTTE
T ss_pred EEECCcCc
Confidence 99998865
No 26
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=96.64 E-value=0.00067 Score=65.48 Aligned_cols=45 Identities=31% Similarity=0.567 Sum_probs=41.1
Q ss_pred CCCChHHHHHHHHhhCCcchhh-hhhccccccccccCCchHHHHHh
Q 046692 140 HIFLPDDILEMCLVRLPLTSLM-NARLVCKKWRYLTTTPRFLQMRR 184 (464)
Q Consensus 140 ~~~lp~dl~~~iL~rLp~~sl~-~~~~vck~W~~l~~~~~f~~~r~ 184 (464)
...||+||+.+||++||..+|. +++.|||+|+.++..+.|...+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~ 96 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKC 96 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHH
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHh
Confidence 4578999999999999999999 99999999999999999877654
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.56 E-value=0.3 Score=47.65 Aligned_cols=191 Identities=14% Similarity=0.156 Sum_probs=98.2
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCc--eeecccccc------CCCcceEEEEECCEEEEEcCCcCCccCccccCC
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQ--WHRIDASIL------KGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRS 259 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~--W~~l~~~~~------~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~ 259 (464)
..++.||+... ...+++||+.+++ |..-..... ......+.+..++.||+...
T Consensus 51 v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------------- 111 (376)
T 3q7m_A 51 LADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------------- 111 (376)
T ss_dssp EETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------------
T ss_pred EECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------------
Confidence 34667777643 1368999998765 765332110 12223345666889988654
Q ss_pred CccccceEEEEeCCCCC--eeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccce
Q 046692 260 SFKTHKGVLVFSPLTKS--WRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRR 337 (464)
Q Consensus 260 ~~~~~~~v~vydp~t~~--W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve 337 (464)
...++.+|+.+++ |+.-.+-. ....+ .+.+ + .+|+..+ ...+.
T Consensus 112 ----~g~l~a~d~~tG~~~W~~~~~~~-~~~~p--~~~~----------------~--~v~v~~~----------~g~l~ 156 (376)
T 3q7m_A 112 ----KAQVYALNTSDGTVAWQTKVAGE-ALSRP--VVSD----------------G--LVLIHTS----------NGQLQ 156 (376)
T ss_dssp ----TSEEEEEETTTCCEEEEEECSSC-CCSCC--EEET----------------T--EEEEECT----------TSEEE
T ss_pred ----CCEEEEEECCCCCEEEEEeCCCc-eEcCC--EEEC----------------C--EEEEEcC----------CCeEE
Confidence 1358999998876 75422111 11111 1222 2 1444322 12467
Q ss_pred eeecCCCc--ccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCC
Q 046692 338 QYRNSFDG--FEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVD 412 (464)
Q Consensus 338 ~Ydp~~n~--W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~ 412 (464)
.||+.+.+ |+. ...+...... ....+..++.||+ |..+ ..+..||+.+. .|+.-...|..
T Consensus 157 ~~d~~tG~~~W~~~~~~~~~~~~~--------~~~~~~~~~~v~~-g~~~------g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 157 ALNEADGAVKWTVNLDMPSLSLRG--------ESAPTTAFGAAVV-GGDN------GRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp EEETTTCCEEEEEECCC-----CC--------CCCCEEETTEEEE-CCTT------TEEEEEETTTCCEEEEEECCC---
T ss_pred EEECCCCcEEEEEeCCCCceeecC--------CCCcEEECCEEEE-EcCC------CEEEEEECCCCcEEEEEecccCCC
Confidence 78887665 765 2111110000 0122345677776 3221 36788998766 47764332211
Q ss_pred C-------CcceEEeEECCEEEEEeCCCceEEEeCCCC--cEEE
Q 046692 413 F-------GVVSSGVVCNGIFYVYSETDKLAGYDIERG--FWIG 447 (464)
Q Consensus 413 ~-------~~~~~~v~~~g~lYViGG~~~v~~YD~~~~--~W~~ 447 (464)
. ......++.++.+|+.+....+.++|+.++ .|+.
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp --------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 0 011222456888888765567888887665 4653
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.17 E-value=0.17 Score=47.73 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=48.0
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLV 269 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~v 269 (464)
++.||+-.|..+ .+.+..+|+.+++-..--+ ++..-++.+++..+++||++... .+.+++
T Consensus 52 ~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~-l~~~~FgeGit~~g~~ly~ltw~----------------~~~v~v 111 (262)
T 3nol_A 52 NGYFYESTGLNG---RSSIRKVDIESGKTLQQIE-LGKRYFGEGISDWKDKIVGLTWK----------------NGLGFV 111 (262)
T ss_dssp TTEEEEEEEETT---EEEEEEECTTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESS----------------SSEEEE
T ss_pred CCEEEEECCCCC---CceEEEEECCCCcEEEEEe-cCCccceeEEEEeCCEEEEEEee----------------CCEEEE
Confidence 578888877543 2368899999988654333 33333455688889999999662 346899
Q ss_pred EeCCCCCe
Q 046692 270 FSPLTKSW 277 (464)
Q Consensus 270 ydp~t~~W 277 (464)
||+.|.+-
T Consensus 112 ~D~~t~~~ 119 (262)
T 3nol_A 112 WNIRNLRQ 119 (262)
T ss_dssp EETTTCCE
T ss_pred EECccCcE
Confidence 99998764
No 29
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.05 E-value=0.23 Score=46.95 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=45.5
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
.++.||+..|..+ .+..+|+.+++-..-- ++..-++.+++..+++||++... .+.++
T Consensus 63 ~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~----------------~~~v~ 119 (268)
T 3nok_A 63 HQGHFFESTGHQG-----TLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWT----------------EGLLF 119 (268)
T ss_dssp ETTEEEEEETTTT-----EEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESS----------------SCEEE
T ss_pred ECCEEEEEcCCCC-----EEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEcc----------------CCEEE
Confidence 3577888877432 3889999998754422 22233445688889999999651 34689
Q ss_pred EEeCCCCCe
Q 046692 269 VFSPLTKSW 277 (464)
Q Consensus 269 vydp~t~~W 277 (464)
+||+.|.+-
T Consensus 120 V~D~~Tl~~ 128 (268)
T 3nok_A 120 TWSGMPPQR 128 (268)
T ss_dssp EEETTTTEE
T ss_pred EEECCcCcE
Confidence 999998653
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.04 E-value=0.43 Score=44.06 Aligned_cols=187 Identities=7% Similarity=-0.039 Sum_probs=91.5
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.+|+.... ...++.||+ +++...... +........++.- ++.||+... ....++
T Consensus 109 ~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~----------------~~~~i~ 165 (299)
T 2z2n_A 109 NGDIWFTEMN-----GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTEN----------------QNNAIG 165 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEET----------------TTTEEE
T ss_pred CCCEEEEecC-----CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEeC----------------CCCEEE
Confidence 3556665321 235788998 666555432 1111222333333 678888653 123589
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+||+ +++....+ .+..-..+....+..+ |+ ||+.... ...+.+||+ +.....
T Consensus 166 ~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~--------------g~--l~v~~~~---------~~~i~~~~~-~g~~~~ 217 (299)
T 2z2n_A 166 RITE-SGDITEFK-IPTPASGPVGITKGND--------------DA--LWFVEII---------GNKIGRITT-SGEITE 217 (299)
T ss_dssp EECT-TCCEEEEE-CSSTTCCEEEEEECTT--------------SS--EEEEETT---------TTEEEEECT-TCCEEE
T ss_pred EEcC-CCcEEEee-CCCCCCcceeEEECCC--------------CC--EEEEccC---------CceEEEECC-CCcEEE
Confidence 9999 77776542 1111111111222211 33 5665422 124566777 444433
Q ss_pred cCCCCCCccceeccccccccccc-ccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEE
Q 046692 349 SLLPNRKSYKFIRQKSDQSITKA-SKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFY 427 (464)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lY 427 (464)
...+...... .+.+ -.++.||+.... ...+.+||+ +.+...+. ++.........+.-+|.||
T Consensus 218 ~~~~~~~~~~---------~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~-~~~~~~~~~~i~~~~g~l~ 280 (299)
T 2z2n_A 218 FKIPTPNARP---------HAITAGAGIDLWFTEWG------ANKIGRLTS-NNIIEEYP-IQIKSAEPHGICFDGETIW 280 (299)
T ss_dssp EECSSTTCCE---------EEEEECSTTCEEEEETT------TTEEEEEET-TTEEEEEE-CSSSSCCEEEEEECSSCEE
T ss_pred EECCCCCCCc---------eeEEECCCCCEEEeccC------CceEEEECC-CCceEEEe-CCCCCCccceEEecCCCEE
Confidence 1111110000 1111 235678887532 236889999 45544442 2322222222223678899
Q ss_pred EEeCCCceEEEeCCCCc
Q 046692 428 VYSETDKLAGYDIERGF 444 (464)
Q Consensus 428 ViGG~~~v~~YD~~~~~ 444 (464)
+....+.+.+||+.+++
T Consensus 281 v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 281 FAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EEETTTEEEEEEEC---
T ss_pred EEecCCcEEEEEcCccc
Confidence 88667789999998754
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.82 E-value=0.28 Score=47.65 Aligned_cols=188 Identities=12% Similarity=0.057 Sum_probs=95.8
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
+.+|+.|+.+ +.+..||..+++....-. ....-.+++.. +..||+.|+. ...+.
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~----------------d~~i~ 57 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIP---VGSNPMGAVISPDGTKVYVANAH----------------SNDVS 57 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEEGG----------------GTEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEee---cCCCcceEEECCCCCEEEEECCC----------------CCeEE
Confidence 3566766532 368999998876544322 11111233332 3457777762 23589
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+||+.+++....-+... .-..++... + ++ .||+.+..+ ..+..||..+++-..
T Consensus 58 v~d~~~~~~~~~~~~~~--~v~~~~~sp-d--------------g~-~l~~~~~~~---------~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 58 IIDTATNNVIATVPAGS--SPQGVAVSP-D--------------GK-QVYVTNMAS---------STLSVIDTTSNTVAG 110 (391)
T ss_dssp EEETTTTEEEEEEECSS--SEEEEEECT-T--------------SS-EEEEEETTT---------TEEEEEETTTTEEEE
T ss_pred EEECCCCeEEEEEECCC--CccceEECC-C--------------CC-EEEEEECCC---------CEEEEEECCCCeEEE
Confidence 99998886543322222 222222222 1 33 256655432 346778877665332
Q ss_pred -cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEEC-CEE
Q 046692 349 -SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCN-GIF 426 (464)
Q Consensus 349 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~-g~l 426 (464)
..... .... .+..--+..||+.++.+ ..+.+||+.+.+....-... ......+..-+ ..|
T Consensus 111 ~~~~~~-~~~~---------~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 111 TVKTGK-SPLG---------LALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKV 172 (391)
T ss_dssp EEECSS-SEEE---------EEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEE
T ss_pred EEeCCC-Ccce---------EEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEE
Confidence 11110 0000 11111234677776543 37899999888655442222 12222111223 467
Q ss_pred EEEeCC-CceEEEeCCCCcEEE
Q 046692 427 YVYSET-DKLAGYDIERGFWIG 447 (464)
Q Consensus 427 YViGG~-~~v~~YD~~~~~W~~ 447 (464)
|+.++. +.|..||+.+++...
T Consensus 173 ~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEE
Confidence 777644 579999998876443
No 32
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.62 E-value=0.9 Score=44.12 Aligned_cols=65 Identities=18% Similarity=0.118 Sum_probs=43.6
Q ss_pred ccccCcEEEEEcCCCCCCCccCceEEEeCCCCc--EEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCc
Q 046692 370 KASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNK--WMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 370 ~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~--W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
.+..++.||+.... ..+.+||+.+.+ |+.- .++.. .....++.++.||+......+.+||+.+++
T Consensus 273 ~~~~~~~l~~~~~~-------g~l~~~d~~tG~~~w~~~-~~~~~--~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 273 FIVDGNRIYLVDQN-------DRVMALTIDGGVTLWTQS-DLLHR--LLTSPVLYNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEETTEEEEEETT-------CCEEEEETTTCCEEEEEC-TTTTS--CCCCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred ceEECCEEEEEcCC-------CeEEEEECCCCcEEEeec-ccCCC--cccCCEEECCEEEEEeCCCeEEEEECCCCc
Confidence 34567889987542 367899998775 7653 12221 122234679999988766679999998876
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.54 E-value=1.4 Score=40.40 Aligned_cols=66 Identities=9% Similarity=-0.033 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEe-CCCceEEEeCCCCcEEEc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYS-ETDKLAGYDIERGFWIGI 448 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViG-G~~~v~~YD~~~~~W~~l 448 (464)
++.||+.... ...+.+||+ ++++..+. ++.........+. -+|.||+.. +.+.|..||+ ++....+
T Consensus 193 ~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 193 DDALWFVEII------GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp TSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEE
T ss_pred CCCEEEEccC------CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEE
Confidence 4678887532 236889999 77776652 3322222222222 267899886 4578999999 4554443
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.49 E-value=0.53 Score=45.60 Aligned_cols=188 Identities=12% Similarity=0.038 Sum_probs=95.0
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCCccccce
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
.+..||+.++.+ ..+..||+.+++....-. .+..-.+++.. +..||+.|.. ...
T Consensus 42 dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~~----------------~~~ 97 (391)
T 1l0q_A 42 DGTKVYVANAHS-----NDVSIIDTATNNVIATVP---AGSSPQGVAVSPDGKQVYVTNMA----------------SST 97 (391)
T ss_dssp TSSEEEEEEGGG-----TEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEETT----------------TTE
T ss_pred CCCEEEEECCCC-----CeEEEEECCCCeEEEEEE---CCCCccceEECCCCCEEEEEECC----------------CCE
Confidence 345666666532 368899998887654322 11122233332 4457776651 245
Q ss_pred EEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcc
Q 046692 267 VLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGF 346 (464)
Q Consensus 267 v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W 346 (464)
+.+||+.+++....-.. ......++... + ++ .+|+.++.+ ..+..||..+.+.
T Consensus 98 v~v~d~~~~~~~~~~~~--~~~~~~~~~s~-d--------------g~-~l~~~~~~~---------~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKT--GKSPLGLALSP-D--------------GK-KLYVTNNGD---------KTVSVINTVTKAV 150 (391)
T ss_dssp EEEEETTTTEEEEEEEC--SSSEEEEEECT-T--------------SS-EEEEEETTT---------TEEEEEETTTTEE
T ss_pred EEEEECCCCeEEEEEeC--CCCcceEEECC-C--------------CC-EEEEEeCCC---------CEEEEEECCCCcE
Confidence 89999998865433221 11222233322 1 33 266666532 3566777766553
Q ss_pred cc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC-
Q 046692 347 EG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG- 424 (464)
Q Consensus 347 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g- 424 (464)
.. ....... .. ....--+..||+.++.+ ..+.+||+.+++-..... ......+.+..-++
T Consensus 151 ~~~~~~~~~~-~~---------~~~~~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 151 INTVSVGRSP-KG---------IAVTPDGTKVYVANFDS------MSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGT 212 (391)
T ss_dssp EEEEECCSSE-EE---------EEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSS
T ss_pred EEEEecCCCc-ce---------EEECCCCCEEEEEeCCC------CEEEEEECCCCeEEEEEe--cCCCccceEECCCCC
Confidence 32 1111000 00 11112234677776543 368999998876443322 21111111112234
Q ss_pred EEEEEe---CCCceEEEeCCCCcE
Q 046692 425 IFYVYS---ETDKLAGYDIERGFW 445 (464)
Q Consensus 425 ~lYViG---G~~~v~~YD~~~~~W 445 (464)
.||+.+ +...|..||+.+.+-
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEE
T ss_pred EEEEEecCcCCCcEEEEECCCCeE
Confidence 566665 456899999987653
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.18 E-value=0.4 Score=44.70 Aligned_cols=40 Identities=13% Similarity=0.029 Sum_probs=28.4
Q ss_pred ceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCC
Q 046692 231 MFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMR 284 (464)
Q Consensus 231 ~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~ 284 (464)
-.++...++.||+..|.. -.+.+.++|+.|++=..--+++
T Consensus 23 tqGL~~~~~~LyestG~~--------------g~S~v~~vD~~tgkv~~~~~l~ 62 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGET--------------GRSSVRKVDLETGRILQRAEVP 62 (243)
T ss_dssp EEEEEEETTEEEEEECCT--------------TSCEEEEEETTTCCEEEEEECC
T ss_pred cccEEEECCEEEEECCCC--------------CCceEEEEECCCCCEEEEEeCC
Confidence 347777899999999932 1357899999999765433444
No 36
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.08 E-value=1 Score=42.53 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=45.5
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVF 270 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vy 270 (464)
+.||+..|... .+.+..+|+.+++-..--+ ++...+..+++..++.||+..- ..+.+++|
T Consensus 32 g~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~-l~~~~fgeGi~~~g~~lyv~t~----------------~~~~v~vi 91 (266)
T 2iwa_A 32 DTLFESTGLYG---RSSVRQVALQTGKVENIHK-MDDSYFGEGLTLLNEKLYQVVW----------------LKNIGFIY 91 (266)
T ss_dssp TEEEEEECSTT---TCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEET----------------TCSEEEEE
T ss_pred CeEEEECCCCC---CCEEEEEECCCCCEEEEEe-cCCCcceEEEEEeCCEEEEEEe----------------cCCEEEEE
Confidence 68888766322 2478999999988654322 2333345577888999999965 23469999
Q ss_pred eCCCCC
Q 046692 271 SPLTKS 276 (464)
Q Consensus 271 dp~t~~ 276 (464)
|+.|.+
T Consensus 92 D~~t~~ 97 (266)
T 2iwa_A 92 DRRTLS 97 (266)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 998764
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.05 E-value=0.98 Score=43.00 Aligned_cols=64 Identities=9% Similarity=0.004 Sum_probs=38.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCCCcceEEeE-EC---CEEEEEeCC-CceEEEeCCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVV-CN---GIFYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~~~~~~~v~-~~---g~lYViGG~-~~v~~YD~~~~ 443 (464)
++.+++.|+.++ .+.+||..++ .|..+..+........+.+. -+ +.+++.|+. ..|..||..+.
T Consensus 171 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 467777777654 6788888654 46665555433232222222 24 677776654 47888988775
No 38
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.03 E-value=1.9 Score=39.56 Aligned_cols=191 Identities=10% Similarity=0.032 Sum_probs=94.5
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.||+... ....+..||+. .+...++. +.....-.+++. -++.||+.... ...+.
T Consensus 30 ~g~l~v~~~-----~~~~v~~~~~~-~~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~----------------~~~v~ 86 (300)
T 2qc5_A 30 DGKVWFTQH-----KANKISSLDQS-GRIKEFEV-PTPDAKVMCLIVSSLGDIWFTENG----------------ANKIG 86 (300)
T ss_dssp TSCEEEEET-----TTTEEEEECTT-SCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT----------------TTEEE
T ss_pred CCCEEEEcC-----CCCeEEEECCC-CceEEEEC-CCCCCcceeEEECCCCCEEEEecC----------------CCeEE
Confidence 455666542 12468899988 77665432 111112233333 25788887541 23588
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+||+. +++..............++ +..+ |+ +|+.... ...+..||+. .....
T Consensus 87 ~~d~~-g~~~~~~~~~~~~~~~~i~-~~~~--------------g~--l~v~~~~---------~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 87 KLSKK-GGFTEYPLPQPDSGPYGIT-EGLN--------------GD--IWFTQLN---------GDRIGKLTAD-GTIYE 138 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCEEEEE-ECST--------------TC--EEEEETT---------TTEEEEECTT-SCEEE
T ss_pred EECCC-CCeEEecCCCCCCCCccce-ECCC--------------CC--EEEEccC---------CCeEEEECCC-CCEEE
Confidence 99998 7766443111111122222 2211 33 5665432 1235566665 33332
Q ss_pred cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEE
Q 046692 349 SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFY 427 (464)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lY 427 (464)
..++...... ..-+...+++||+.... ...+.+||+ +++...+. ++.........+. -+|.||
T Consensus 139 ~~~~~~~~~~--------~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 139 YDLPNKGSYP--------AFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALW 202 (300)
T ss_dssp EECSSTTCCE--------EEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEE
T ss_pred ccCCCCCCCc--------eeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEE
Confidence 1111100000 01111234668886532 236889999 67776653 3322222222222 267899
Q ss_pred EEeC-CCceEEEeCCCCcEEEc
Q 046692 428 VYSE-TDKLAGYDIERGFWIGI 448 (464)
Q Consensus 428 ViGG-~~~v~~YD~~~~~W~~l 448 (464)
+... .+.|..||+ ++.+..+
T Consensus 203 v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 203 FVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEETTTTEEEEECT-TCCEEEE
T ss_pred EEccCCCEEEEEcC-CCcEEEE
Confidence 8764 457999999 5665554
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.83 Score=43.51 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=40.1
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCc--E--EEeccCCCCCCcceEEeEECCEEEEEeC-CCceEEEeCC-CCcEEEc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNK--W--MEIQRLPVDFGVVSSGVVCNGIFYVYSE-TDKLAGYDIE-RGFWIGI 448 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~--W--~~v~~~p~~~~~~~~~v~~~g~lYViGG-~~~v~~YD~~-~~~W~~l 448 (464)
+.+++.|+.++ .+.+||..+.. + ..+..........+....-++.+++.++ ...|..||.. ...|..+
T Consensus 221 ~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 221 RSYLASVSQDR------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 294 (379)
T ss_dssp SEEEEEEETTS------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEE
T ss_pred CCeEEEEeCCC------EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccc
Confidence 57888887654 57888887763 2 2221111111122222223666555554 4578888876 5678877
Q ss_pred ccCCC
Q 046692 449 QTSPF 453 (464)
Q Consensus 449 ~~lp~ 453 (464)
..+..
T Consensus 295 ~~~~~ 299 (379)
T 3jrp_A 295 GEVHQ 299 (379)
T ss_dssp EEEC-
T ss_pred cceec
Confidence 65443
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.79 E-value=2.3 Score=40.09 Aligned_cols=65 Identities=11% Similarity=-0.006 Sum_probs=40.4
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEEC-CEEEEEe-CCCceEEEeCCCCcEEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCN-GIFYVYS-ETDKLAGYDIERGFWIG 447 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~-g~lYViG-G~~~v~~YD~~~~~W~~ 447 (464)
++.||+.+.. ...+.+||+.+.+....-+.+.+. ..+..-+ +.+|+.+ +.+.|..||+.+.+...
T Consensus 242 g~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 242 RQRAFITDSK------AAEVLVVDTRNGNILAKVAAPESL---AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTEEEEEESS------SSEEEEEETTTCCEEEEEECSSCC---CEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCCCc---eEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 4567776543 247899999888755443443321 1222224 4588877 45789999998876543
No 41
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.76 E-value=0.44 Score=45.54 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=37.3
Q ss_pred ceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 207 EIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
.++.+|+.++++..+............+..-+++||+.+.. . ....+++||..+++++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~---------~-----~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE---------D-----DEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE---------T-----TEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec---------C-----CCceEEEEEecCCcEEEeee
Confidence 57788888888877543111122222233347778887641 0 13468999998888776654
No 42
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.48 E-value=3.3 Score=38.98 Aligned_cols=207 Identities=11% Similarity=-0.040 Sum_probs=99.6
Q ss_pred CCCeEEEeccccC-CccccceEEeeCCCCceeeccccccCCCcceEEEE-EC-CEEEEEcCCcCCccCccccCCCccccc
Q 046692 189 QNPWLFLFGAVKD-GYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IM-DDVYVVGGCSSLTSFGRVDRSSFKTHK 265 (464)
Q Consensus 189 ~~~~l~v~GG~~~-~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~-~~IYVvGG~~gl~~~~~~~~~~~~~~~ 265 (464)
.+..+|+...... ......++.+|+.+.+....-. .. .. .+.++. .+ +.+|+.++. ..
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~-~~-~~~~~~s~dg~~l~v~~~~----------------~~ 111 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-ND-LK-PFGATINNTTQTLWFGNTV----------------NS 111 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-ES-SC-CCSEEEETTTTEEEEEETT----------------TT
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-cC-CC-cceEEECCCCCEEEEEecC----------------CC
Confidence 4456766653211 1124578999998876543322 11 11 223333 33 458887761 23
Q ss_pred eEEEEeCCCCCeeecCCCCCCc--------cccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccce
Q 046692 266 GVLVFSPLTKSWRKVASMRYAR--------SMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRR 337 (464)
Q Consensus 266 ~v~vydp~t~~W~~l~~m~~~R--------~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve 337 (464)
.+.+||+.+++-...-+..... ....+++.. + ++ .+|+.+... ...+.
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-d--------------g~-~l~~~~~~~--------~~~i~ 167 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-A--------------TN-TVYISGIGK--------ESVIW 167 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-T--------------TT-EEEEEEESS--------SCEEE
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-C--------------CC-EEEEEecCC--------CceEE
Confidence 6899999988743221121111 112233322 1 33 266665211 23466
Q ss_pred eeecCCCcccc-cCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCC--CCC
Q 046692 338 QYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV--DFG 414 (464)
Q Consensus 338 ~Ydp~~n~W~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~--~~~ 414 (464)
.||+.+.+-.. .+........ ....--+..||+... -..+.+||+.+.+=......+. +..
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~---------~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTG---------LALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCC---------CEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred EEcCCCCceEEEecCCCCccce---------EEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 77776554222 1111110000 111122346777643 2367899998775332222211 112
Q ss_pred cceEEeEE--CCEEEEEeC-CCceEEEeCCCCcEEEcccCCCC
Q 046692 415 VVSSGVVC--NGIFYVYSE-TDKLAGYDIERGFWIGIQTSPFP 454 (464)
Q Consensus 415 ~~~~~v~~--~g~lYViGG-~~~v~~YD~~~~~W~~l~~lp~p 454 (464)
.....+.. ++.+|+.+. .+.|..||+.+++....-..+.+
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 22222222 456888764 37899999988775544334433
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.39 E-value=3.1 Score=39.41 Aligned_cols=72 Identities=7% Similarity=-0.138 Sum_probs=45.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCc-ceEEeEECCEEEEEeCCCceEEEeCCC--CcEEEccc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGV-VSSGVVCNGIFYVYSETDKLAGYDIER--GFWIGIQT 450 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~-~~~~v~~~g~lYViGG~~~v~~YD~~~--~~W~~l~~ 450 (464)
++.+++.|+.++ .+.+||..+.+-.. .+...... .+....-++.+++.|....|..||..+ +.|..+..
T Consensus 213 ~~~~l~~~~~d~------~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 213 NGSRVAWVSHDS------TVCLADADKKMAVA--TLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGR 284 (372)
T ss_dssp SSSEEEEEETTT------EEEEEEGGGTTEEE--EEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCC
T ss_pred CCCEEEEEeCCC------EEEEEECCCCceeE--EEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeec
Confidence 455666666543 68899997765322 22222212 222234478888887667899999988 99998877
Q ss_pred CCC
Q 046692 451 SPF 453 (464)
Q Consensus 451 lp~ 453 (464)
+..
T Consensus 285 ~~~ 287 (372)
T 1k8k_C 285 LDV 287 (372)
T ss_dssp CCC
T ss_pred cCc
Confidence 654
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.35 E-value=0.91 Score=44.58 Aligned_cols=181 Identities=11% Similarity=-0.062 Sum_probs=89.6
Q ss_pred ceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCC
Q 046692 207 EIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRY 285 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~ 285 (464)
.++.+|+.+..+..+.. .+.+....+++.. ++.+|+.++. + ..+.+||+.+++.....+...
T Consensus 102 ~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~---------~-------~~i~~~d~~~g~~~~~~~~~~ 164 (433)
T 3bws_A 102 KLIALDKEGITHRFISR-FKTGFQPKSVRFIDNTRLAIPLLE---------D-------EGMDVLDINSGQTVRLSPPEK 164 (433)
T ss_dssp CEEECCBTTCSEEEEEE-EECSSCBCCCEESSSSEEEEEBTT---------S-------SSEEEEETTTCCEEEECCCHH
T ss_pred EEEEECCCCCcceEEEE-EcCCCCceEEEEeCCCeEEEEeCC---------C-------CeEEEEECCCCeEeeecCccc
Confidence 68889998776665544 2222212222222 7788888772 1 248999999988765433211
Q ss_pred ---CccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc-cCCCCCCccceec
Q 046692 286 ---ARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIR 361 (464)
Q Consensus 286 ---~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~l~~~~~~~~~~ 361 (464)
.........+..+ ++ +++.|+.+ ..+..||..+.+... ..........
T Consensus 165 ~~~~~~~v~~~~~~~~--------------~~--~~~s~~~d---------~~v~~~d~~~~~~~~~~~~~~~~~~~--- 216 (433)
T 3bws_A 165 YKKKLGFVETISIPEH--------------NE--LWVSQMQA---------NAVHVFDLKTLAYKATVDLTGKWSKI--- 216 (433)
T ss_dssp HHTTCCEEEEEEEGGG--------------TE--EEEEEGGG---------TEEEEEETTTCCEEEEEECSSSSEEE---
T ss_pred ccccCCceeEEEEcCC--------------CE--EEEEECCC---------CEEEEEECCCceEEEEEcCCCCCeeE---
Confidence 1111111222211 22 56666542 346677776544222 1100000000
Q ss_pred ccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC-EEEEEeC--------C
Q 046692 362 QKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSE--------T 432 (464)
Q Consensus 362 ~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g-~lYViGG--------~ 432 (464)
.+..-.+..+|+.++.++ .+.+||+.+.+.... ++........+..-++ .||+.+. .
T Consensus 217 ------~~~~~~~~~l~~~~~~~~------~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 217 ------LLYDPIRDLVYCSNWISE------DISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp ------EEEETTTTEEEEEETTTT------EEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred ------EEEcCCCCEEEEEecCCC------cEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 111122446777765433 689999988765433 3322222211112244 5555541 2
Q ss_pred CceEEEeCCCCcEE
Q 046692 433 DKLAGYDIERGFWI 446 (464)
Q Consensus 433 ~~v~~YD~~~~~W~ 446 (464)
..|..||+.+++-.
T Consensus 283 g~i~~~d~~~~~~~ 296 (433)
T 3bws_A 283 GRLGIYSMDKEKLI 296 (433)
T ss_dssp EEEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEE
Confidence 37889998877543
No 45
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.31 E-value=3.1 Score=38.06 Aligned_cols=66 Identities=8% Similarity=-0.062 Sum_probs=39.4
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEe-CCCceEEEeCCCCcEEEc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYS-ETDKLAGYDIERGFWIGI 448 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViG-G~~~v~~YD~~~~~W~~l 448 (464)
++.||+.... ...+.+||+ ++.+.... ++.........+. -+|.|||.. +.+.|..||+ ++....+
T Consensus 198 ~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 198 DGALWFVEIM------GNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp TSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred CCCEEEEccC------CCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 5678886532 236889999 66666652 2322222222222 267899886 3478999999 4555543
No 46
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.05 E-value=3.6 Score=37.78 Aligned_cols=64 Identities=9% Similarity=0.062 Sum_probs=36.6
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcc-eEEeEECCEEEEEeCCCceEEEeCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVV-SSGVVCNGIFYVYSETDKLAGYDIER 442 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~-~~~v~~~g~lYViGG~~~v~~YD~~~ 442 (464)
.++.||+....+. ..+.+||+....-..+.. ....... ..+..-+|.|||....+.|..|+...
T Consensus 216 ~~G~l~v~~~~~~-----~~i~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 216 SNGEILIADNHNN-----FNLTIFTQDGQLISALES-KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp TTCCEEEEECSSS-----CEEEEECTTSCEEEEEEE-SSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCCEEEEeCCCC-----EEEEEECCCCCEEEEEcc-cCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 3578888775321 268999986554333322 1111111 22223478999987666788887643
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.04 E-value=1.8 Score=41.18 Aligned_cols=69 Identities=14% Similarity=0.256 Sum_probs=40.1
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcc-eEEEEE-CCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFM-FSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~-~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
++.+++.|+. ...+..||..+.+|..+.. ....... .+++.. ++.+++.|+. + ..+
T Consensus 19 ~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~---------d-------g~i 76 (372)
T 1k8k_C 19 DRTQIAICPN-----NHEVHIYEKSGNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCGT---------D-------RNA 76 (372)
T ss_dssp TSSEEEEECS-----SSEEEEEEEETTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEET---------T-------SCE
T ss_pred CCCEEEEEeC-----CCEEEEEeCCCCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEcC---------C-------CeE
Confidence 3455666653 2368899999887666544 2222222 223322 5666677762 2 247
Q ss_pred EEEeCCCCCeeec
Q 046692 268 LVFSPLTKSWRKV 280 (464)
Q Consensus 268 ~vydp~t~~W~~l 280 (464)
.+||..++++...
T Consensus 77 ~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 77 YVWTLKGRTWKPT 89 (372)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEECCCCeeeee
Confidence 8899888876554
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.84 E-value=3.5 Score=38.53 Aligned_cols=72 Identities=13% Similarity=0.152 Sum_probs=39.8
Q ss_pred cEEEEEcCCCCCCCccCceEEEeC--CCCcEEE---eccCCCCCCcceEEe-EECCEEEEEe-CCCceEEEeCCCCcEEE
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDS--VSNKWME---IQRLPVDFGVVSSGV-VCNGIFYVYS-ETDKLAGYDIERGFWIG 447 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~--~t~~W~~---v~~~p~~~~~~~~~v-~~~g~lYViG-G~~~v~~YD~~~~~W~~ 447 (464)
..||+.... ...+++||. .+..... +..++...+.....+ --+|.|||.. +...|.+||+++++...
T Consensus 161 ~~lyv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 161 KIFYYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp CEEEEEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred CEEEEecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 468887643 246788875 4554432 223332112222222 2368899875 34579999999776554
Q ss_pred cccCC
Q 046692 448 IQTSP 452 (464)
Q Consensus 448 l~~lp 452 (464)
.-.+|
T Consensus 235 ~i~~p 239 (297)
T 3g4e_A 235 TVKLP 239 (297)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 33344
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.77 E-value=0.59 Score=44.02 Aligned_cols=34 Identities=6% Similarity=-0.114 Sum_probs=24.8
Q ss_pred eEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeee
Q 046692 232 FSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRK 279 (464)
Q Consensus 232 ~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~ 279 (464)
.++...++.||+..|.. -.+.+.++|+.|++=..
T Consensus 46 qGL~~~~~~LyestG~~--------------g~S~v~~vD~~Tgkv~~ 79 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLN--------------GRSSIRKVDIESGKTLQ 79 (262)
T ss_dssp EEEEEETTEEEEEEEET--------------TEEEEEEECTTTCCEEE
T ss_pred ceEEEECCEEEEECCCC--------------CCceEEEEECCCCcEEE
Confidence 45556689999999831 13568999999997543
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.68 E-value=0.52 Score=45.45 Aligned_cols=70 Identities=10% Similarity=0.214 Sum_probs=35.4
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcce-EEEEE-CCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMF-SVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~-s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
++.+++.|+.+ ..+..||..++.|..+.. +....... +++.. ++.+++.|+. + ..+
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~---------d-------~~v 79 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQ---------D-------RNA 79 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEET---------T-------SSE
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeC---------C-------CeE
Confidence 45566666532 357888988888777655 22222222 22222 5566666662 2 247
Q ss_pred EEEeCCCCC-eeecC
Q 046692 268 LVFSPLTKS-WRKVA 281 (464)
Q Consensus 268 ~vydp~t~~-W~~l~ 281 (464)
.+||..++. |....
T Consensus 80 ~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTL 94 (377)
T ss_dssp EEC------CCCCEE
T ss_pred EEEEcCCCCceeeee
Confidence 889988876 54433
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.53 E-value=1.6 Score=40.80 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=43.2
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCC--CCcEEEeccCCCCCCcceEEeEECC-EEEEEeC-CCceEEE--eCCCCcEEEc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSV--SNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSE-TDKLAGY--DIERGFWIGI 448 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~--t~~W~~v~~~p~~~~~~~~~v~~~g-~lYViGG-~~~v~~Y--D~~~~~W~~l 448 (464)
..||+.+..+ ..+.+||.. +.+++.+..++........+..-+| .||+.+. .+.|..| |+++++++.+
T Consensus 243 ~~l~v~~~~~------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 243 RHLYACDRTA------SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp SEEEEEETTT------TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred CEEEEEecCC------CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 4677665432 367888887 5677777655543222222222244 5777663 4566666 7788888887
Q ss_pred ccCCC
Q 046692 449 QTSPF 453 (464)
Q Consensus 449 ~~lp~ 453 (464)
..++.
T Consensus 317 ~~~~~ 321 (343)
T 1ri6_A 317 GRYAV 321 (343)
T ss_dssp EEEEC
T ss_pred ccccc
Confidence 66543
No 52
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.46 E-value=4.5 Score=39.95 Aligned_cols=67 Identities=16% Similarity=0.254 Sum_probs=37.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC-CceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-DKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~W~ 446 (464)
++.+++.|+.++ .+.+||..+.+-...-..+........++..++.+++.|+. ..|..||+.+++..
T Consensus 328 ~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 328 KDNILVSGNADS------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp ETTEEEEEETTS------CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE
T ss_pred eCCEEEEEeCCC------eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCcee
Confidence 345666676544 68899997765322211111111111223456666666654 57999999887644
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.45 E-value=2 Score=41.99 Aligned_cols=65 Identities=18% Similarity=0.085 Sum_probs=36.5
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC-EEEEEeCC---------------CceEEE
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSET---------------DKLAGY 438 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g-~lYViGG~---------------~~v~~Y 438 (464)
..+|+.++.++ .+.+||+.+.+-. ..++........+..-++ .||+.+.. ..|..|
T Consensus 315 ~~l~~~~~~~~------~v~v~d~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 315 NKIYVSDMCCS------KIEVYDLKEKKVQ--KSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp TEEEEEETTTT------EEEEEETTTTEEE--EEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CEEEEEecCCC------EEEEEECCCCcEE--EEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 46888776533 7899999876533 233322222222222244 46665432 279999
Q ss_pred eCCCCcEEE
Q 046692 439 DIERGFWIG 447 (464)
Q Consensus 439 D~~~~~W~~ 447 (464)
|+.+.+...
T Consensus 387 d~~~~~~~~ 395 (433)
T 3bws_A 387 DTTTDTVKE 395 (433)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 998776443
No 54
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=93.14 E-value=0.017 Score=54.36 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=35.2
Q ss_pred ccccccC--ccccchhhhhhcccCCCCChHHHHHHHHhhCCcchhhhhh-cccccc
Q 046692 118 KFWKKSN--RKYLELEDSVRNSRMHIFLPDDILEMCLVRLPLTSLMNAR-LVCKKW 170 (464)
Q Consensus 118 ~~W~~~~--~r~~~l~~ll~~vrl~~~lp~dl~~~iL~rLp~~sl~~~~-~vck~W 170 (464)
++|++|+ .|..++++||++|||+++.|++|.+.| ...++++.+ +.|+..
T Consensus 202 ~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v----~~~~l~~~~~~~c~~l 253 (256)
T 3hve_A 202 IRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQM----LNEPLVREIVKECSNI 253 (256)
T ss_dssp TTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHH----HTSTTHHHHHCC----
T ss_pred HHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHH----hcChHHHhhHHHHHHH
Confidence 5699999 577899999999999999999998865 455666666 567543
No 55
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=93.14 E-value=0.022 Score=54.32 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=39.6
Q ss_pred ccccccC--ccccchhhhhhcccCCCCChHHHHHHHHhhCCcchhhhhhccccc
Q 046692 118 KFWKKSN--RKYLELEDSVRNSRMHIFLPDDILEMCLVRLPLTSLMNARLVCKK 169 (464)
Q Consensus 118 ~~W~~~~--~r~~~l~~ll~~vrl~~~lp~dl~~~iL~rLp~~sl~~~~~vck~ 169 (464)
++|++|+ .|..++++||++|||+++.|++|.+. +...++++.++.|+.
T Consensus 210 ~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~----v~~~~l~~~~~~c~~ 259 (279)
T 3i3n_A 210 LKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRH----VKPERLVANNEVCVK 259 (279)
T ss_dssp HHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHT----TTTSHHHHTCHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHH----hhccchhcCCHHHHH
Confidence 5699999 56689999999999999999999874 366677777777754
No 56
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.06 E-value=1.4 Score=47.68 Aligned_cols=64 Identities=9% Similarity=0.004 Sum_probs=37.4
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCCCcceEEeE-EC---CEEEEEeCC-CceEEEeCCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVV-CN---GIFYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~~~~~~~v~-~~---g~lYViGG~-~~v~~YD~~~~ 443 (464)
++.+++.|+.++ .+.+||..++ .+..+..+........+.+. -+ +.+++.|+. ..|..||+.+.
T Consensus 169 d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 169 ESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp GGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 356777777654 5788887654 45555444432222222222 23 677777664 47888988764
No 57
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.05 E-value=0.42 Score=47.60 Aligned_cols=83 Identities=17% Similarity=0.122 Sum_probs=32.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcE-------EEeccCCCCCCcceEEeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKW-------MEIQRLPVDFGVVSSGVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W-------~~v~~~p~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
.++..++.|+.++ .+.+||..+..- ..+..+........+ +..++..++.|+. ..|..||+.++.
T Consensus 344 ~~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 344 FDNKRIVSGAYDG------KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR-LQFDEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp CCSSEEEEEETTS------CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC-EEECSSCEEECCSSSEEEEEC-----
T ss_pred ecCCEEEEEeCCC------cEEEEECCCCCCccccccchheeeccCCCCCeEE-EEeCCCEEEEEeCCCEEEEEECCCCC
Confidence 3667778887654 678888754320 011111111111222 2447777777664 478999998876
Q ss_pred EEEcccCCCCccccccCC
Q 046692 445 WIGIQTSPFPPRVIEYYP 462 (464)
Q Consensus 445 W~~l~~lp~pr~~~~~~~ 462 (464)
-......+.|.....|.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 417 AAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp ------------------
T ss_pred CcccCCCCCCccceeeec
Confidence 555444444555555544
No 58
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.97 E-value=0.97 Score=42.64 Aligned_cols=30 Identities=10% Similarity=-0.047 Sum_probs=22.8
Q ss_pred eEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCe
Q 046692 232 FSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSW 277 (464)
Q Consensus 232 ~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W 277 (464)
.++...++.||+..|.. ..+.++|+.|++=
T Consensus 58 qGL~~~~~~Ly~stG~~----------------g~v~~iD~~Tgkv 87 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ----------------GTLRQLSLESAQP 87 (268)
T ss_dssp EEEEEETTEEEEEETTT----------------TEEEECCSSCSSC
T ss_pred ceEEEECCEEEEEcCCC----------------CEEEEEECCCCcE
Confidence 46666799999999931 1288999999864
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.81 E-value=1.7 Score=41.63 Aligned_cols=75 Identities=9% Similarity=-0.126 Sum_probs=43.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcE--EEeccCCCCCCcc-eEEeEECCEEEEEeCCCceEEEeCCCCcEEEccc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKW--MEIQRLPVDFGVV-SSGVVCNGIFYVYSETDKLAGYDIERGFWIGIQT 450 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W--~~v~~~p~~~~~~-~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~l~~ 450 (464)
++++++.|+.++ .+.+||..+..- ..+..+....... +....-++.+.+.|..+.+..|+.....|.....
T Consensus 216 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T 3dwl_C 216 SGNALAYAGHDS------SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRD 289 (377)
T ss_dssp TSSCEEEEETTT------EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEee
Confidence 456667776543 577888876642 2233333222222 2223458888888888888899998888887766
Q ss_pred CCCC
Q 046692 451 SPFP 454 (464)
Q Consensus 451 lp~p 454 (464)
+..+
T Consensus 290 ~~~~ 293 (377)
T 3dwl_C 290 LDAG 293 (377)
T ss_dssp CCSC
T ss_pred eccc
Confidence 6543
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.69 E-value=6.2 Score=36.48 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeC-CCceEEEeCCCCcEEEc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TDKLAGYDIERGFWIGI 448 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~~W~~l 448 (464)
++..+++++.++ .+.+||..+.+-...-.. ..........-++.++++|+ ...|..||..+..-..+
T Consensus 194 ~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 194 DGTKLWTGGLDN------TVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp TSSEEEEEETTS------EEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred CCCEEEEEecCC------cEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 455666666543 688999987753332222 21222222223555565554 45788999887654333
No 61
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.58 E-value=3.8 Score=40.53 Aligned_cols=187 Identities=6% Similarity=-0.098 Sum_probs=91.5
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEE-ECCE-EEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCC
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDD-VYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASM 283 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~~-IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m 283 (464)
..++.+|+.+++...+.. .. . ...+++. .+++ |++.+.. + ....++++|+.+++...+...
T Consensus 203 ~~i~~~d~~tg~~~~l~~-~~-~-~~~~~~~spdg~~la~~~~~---------~-----g~~~i~~~d~~~~~~~~l~~~ 265 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVAS-FP-R-HNGAPAFSPDGSKLAFALSK---------T-----GSLNLYVMDLASGQIRQVTDG 265 (415)
T ss_dssp CEEEEEETTTCCEEEEEC-CS-S-CEEEEEECTTSSEEEEEECT---------T-----SSCEEEEEETTTCCEEECCCC
T ss_pred cEEEEEECCCCcEEEeec-CC-C-cccCEEEcCCCCEEEEEEec---------C-----CCceEEEEECCCCCEEeCcCC
Confidence 478999999988776644 11 1 1122222 2444 5545541 1 124699999999887766543
Q ss_pred CCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccccCCCCCCccceeccc
Q 046692 284 RYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQK 363 (464)
Q Consensus 284 ~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~~~l~~~~~~~~~~~~ 363 (464)
.. ......+..+ |+. |+..+..+ ....+..+|..+..-...........
T Consensus 266 ~~---~~~~~~~spd--------------g~~-l~~~s~~~-------g~~~i~~~d~~~~~~~~l~~~~~~~~------ 314 (415)
T 2hqs_A 266 RS---NNTEPTWFPD--------------SQN-LAFTSDQA-------GRPQVYKVNINGGAPQRITWEGSQNQ------ 314 (415)
T ss_dssp SS---CEEEEEECTT--------------SSE-EEEEECTT-------SSCEEEEEETTSSCCEECCCSSSEEE------
T ss_pred CC---cccceEECCC--------------CCE-EEEEECCC-------CCcEEEEEECCCCCEEEEecCCCccc------
Confidence 21 1111222212 332 33333211 12345556665544221111100000
Q ss_pred ccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC-C---ceEEEe
Q 046692 364 SDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-D---KLAGYD 439 (464)
Q Consensus 364 ~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~-~---~v~~YD 439 (464)
......+++.+++++... ....+.++|+.+.....+..-. .....+..-+|+..++++. . .|+.+|
T Consensus 315 ----~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 315 ----DADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp ----EEEECTTSSEEEEEEECS---SCEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred ----CeEECCCCCEEEEEECcC---CceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 011123344444443321 1247899999998887664321 2222222335654444432 2 689999
Q ss_pred CCCCcEEEccc
Q 046692 440 IERGFWIGIQT 450 (464)
Q Consensus 440 ~~~~~W~~l~~ 450 (464)
+..+....+..
T Consensus 385 ~~g~~~~~l~~ 395 (415)
T 2hqs_A 385 TDGRFKARLPA 395 (415)
T ss_dssp TTSCCEEECCC
T ss_pred CCCCcEEEeeC
Confidence 98887777655
No 62
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.46 E-value=4.5 Score=37.78 Aligned_cols=65 Identities=5% Similarity=-0.107 Sum_probs=39.8
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE-ECC-EEEEEcCCcCCccCccccCCCccccce
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMD-DVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~-~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
..+.+|+.... .+.+..||+.+++....-. .+ .....++. .++ .||+.+.. ...
T Consensus 8 ~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~-~~--~~~~~~~~s~dg~~l~~~~~~----------------~~~ 63 (331)
T 3u4y_A 8 TSNFGIVVEQH-----LRRISFFSTDTLEILNQIT-LG--YDFVDTAITSDCSNVVVTSDF----------------CQT 63 (331)
T ss_dssp CCCEEEEEEGG-----GTEEEEEETTTCCEEEEEE-CC--CCEEEEEECSSSCEEEEEEST----------------TCE
T ss_pred CCCEEEEEecC-----CCeEEEEeCcccceeeeEE-cc--CCcceEEEcCCCCEEEEEeCC----------------CCe
Confidence 35677777653 3468999999988765433 11 11112222 244 58877651 236
Q ss_pred EEEEeCCCCCe
Q 046692 267 VLVFSPLTKSW 277 (464)
Q Consensus 267 v~vydp~t~~W 277 (464)
+++||+.+++.
T Consensus 64 i~~~d~~~~~~ 74 (331)
T 3u4y_A 64 LVQIETQLEPP 74 (331)
T ss_dssp EEEEECSSSSC
T ss_pred EEEEECCCCce
Confidence 89999998874
No 63
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.23 E-value=3.4 Score=39.49 Aligned_cols=61 Identities=13% Similarity=0.087 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEe-EECCEEEEEeCC-CceEEEeC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSET-DKLAGYDI 440 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v-~~~g~lYViGG~-~~v~~YD~ 440 (464)
++.+++.|+.++ .+.+||..++.|..+..+..........+ .-++.+++.|+. ..|..||.
T Consensus 161 ~~~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASYDD------TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCC------cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 456677777644 68899999988876655543322222221 225666666554 35666663
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.10 E-value=5.7 Score=39.22 Aligned_cols=67 Identities=7% Similarity=-0.032 Sum_probs=42.0
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcEEE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFWIG 447 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~ 447 (464)
.++..++.|+.++ .+.+||+.+..-..... ........+...++.+.+.|+.+.|..||..+++-..
T Consensus 360 ~~~~~l~s~s~dg------~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 360 LSDKFLVSAAADG------SIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ECSSEEEEEETTS------EEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred EcCCEEEEEeCCC------cEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe
Confidence 3456667776644 68899998765322221 1112222234567788888877789999999887544
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.70 E-value=4 Score=38.14 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=40.0
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCCCcE-EEeccCCCCCCcceEEeEECCE-EEEEeC-CCceEEEeCCCCcEEEccc
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKW-MEIQRLPVDFGVVSSGVVCNGI-FYVYSE-TDKLAGYDIERGFWIGIQT 450 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t~~W-~~v~~~p~~~~~~~~~v~~~g~-lYViGG-~~~v~~YD~~~~~W~~l~~ 450 (464)
.+|+.+..+ ..+.+||+.+.+. ..+..++........+..-+|+ ||+... .+.|..||+.+++...+..
T Consensus 189 ~l~v~~~~~------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 189 FAFVANLIG------NSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EEEEEETTT------TEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCC------CeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecc
Confidence 577776432 3689999987765 1122333222222222233555 777653 4579999999988754443
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=91.68 E-value=8.3 Score=35.69 Aligned_cols=65 Identities=17% Similarity=0.140 Sum_probs=34.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeC-CCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+.+-...-..............-++..++.|+ ...|..||..+.+
T Consensus 160 ~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 160 DGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CCCEEEEEeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 456777777644 6889999877643221111111111111122455555554 4578888887664
No 67
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.39 E-value=9.1 Score=35.63 Aligned_cols=68 Identities=10% Similarity=-0.004 Sum_probs=39.6
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE-ECC-EEEEEcCCcCCccCccccCCCccccce
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMD-DVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~-~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
.++.+|+.++. .+.++.+|+.+++....-. .+.......++. .++ .+|+.+.. ...
T Consensus 9 ~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~----------------~~~ 66 (349)
T 1jmx_B 9 AGHEYMIVTNY-----PNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNH----------------YGD 66 (349)
T ss_dssp TTCEEEEEEET-----TTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETT----------------TTE
T ss_pred CCCEEEEEeCC-----CCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCC----------------CCc
Confidence 45677777663 3468999999887643322 111001223333 244 57877651 235
Q ss_pred EEEEeCCCCCee
Q 046692 267 VLVFSPLTKSWR 278 (464)
Q Consensus 267 v~vydp~t~~W~ 278 (464)
+++||+.+++-.
T Consensus 67 i~~~d~~t~~~~ 78 (349)
T 1jmx_B 67 IYGIDLDTCKNT 78 (349)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEeCCCCcEE
Confidence 899999987654
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.38 E-value=11 Score=36.42 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=35.3
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCC-cceEEeE-ECCE-EEEEeCC-CceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG-VVSSGVV-CNGI-FYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~-~~~~~v~-~~g~-lYViGG~-~~v~~YD~~~~ 443 (464)
.++.+++.|+.++ .+.+||..+..-.. .++.... ...+.+. -++. +++.|+. ..|..||+.+.
T Consensus 257 ~~~~~l~~~~~dg------~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 257 TYGKYVIAGHVSG------VITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp CTTEEEEEEETTS------CEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCCEEEEEcCCC------eEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 3567778887654 68999998775322 2222111 1222212 2444 5555544 57888998765
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.33 E-value=9 Score=36.36 Aligned_cols=82 Identities=11% Similarity=0.083 Sum_probs=41.5
Q ss_pred CeEEEeccccCC-ccccceEEeeCCCCceeeccccccCCCcceEEEEEC-CEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 191 PWLFLFGAVKDG-YCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIM-DDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 191 ~~l~v~GG~~~~-~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~-~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
...+++|.+..+ ...-.++.+|+.+.++..+... ......+.+..-+ ..||+.+... +. ...-.+|
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~--------~~---~~~v~~~ 80 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS--------KD---QAAVSAF 80 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS--------ST---TCEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccC--------CC---CCcEEEE
Confidence 345566665432 1222456678888888877652 2222222222334 4577776510 00 0112346
Q ss_pred EEeCCCCCeeecCCCC
Q 046692 269 VFSPLTKSWRKVASMR 284 (464)
Q Consensus 269 vydp~t~~W~~l~~m~ 284 (464)
.+|+.+++.+.+...+
T Consensus 81 ~~~~~~g~~~~~~~~~ 96 (361)
T 3scy_A 81 AFDKEKGTLHLLNTQK 96 (361)
T ss_dssp EEETTTTEEEEEEEEE
T ss_pred EEeCCCCcEEEeeEec
Confidence 6677777777665444
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.30 E-value=2.9 Score=39.27 Aligned_cols=62 Identities=23% Similarity=0.090 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEeCCCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
+++||+..-. -+.+.+||+.+.+ .+..++.. ...+.+.. -++.+|+..|.+.|..+|+++.+
T Consensus 75 g~~lyv~t~~------~~~v~viD~~t~~--v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 75 NEKLYQVVWL------KNIGFIYDRRTLS--NIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp TTEEEEEETT------CSEEEEEETTTTE--EEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred CCEEEEEEec------CCEEEEEECCCCc--EEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 3477777543 3468889987653 44444332 01111223 35679988888899999998854
No 71
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.26 E-value=11 Score=40.51 Aligned_cols=84 Identities=12% Similarity=-0.044 Sum_probs=49.1
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCcEEEccc-
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGFWIGIQT- 450 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~W~~l~~- 450 (464)
.+++||+.-.. ...|++||+....-+.+...+.......+.++.++.|||.- +.+.|.++|+.+++-..+-.
T Consensus 550 ~~~~LY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 550 LSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TTCCEEEEETT------TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred cCCEEEEEecC------CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 35789998743 34789999875544444332221222222346788999986 45689999987665433322
Q ss_pred -CCCCccccccCC
Q 046692 451 -SPFPPRVIEYYP 462 (464)
Q Consensus 451 -lp~pr~~~~~~~ 462 (464)
++.|..++-|+|
T Consensus 624 ~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 624 NLLSPEDMVLFHQ 636 (699)
T ss_dssp TCSSCCCCCBCSS
T ss_pred CCCCCcEEEEeCc
Confidence 334444444443
No 72
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.04 E-value=4.7 Score=38.16 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=33.6
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCC--cceEEeE-E--CCEEEEEeCCC-ceEEEeCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG--VVSSGVV-C--NGIFYVYSETD-KLAGYDIER 442 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~--~~~~~v~-~--~g~lYViGG~~-~v~~YD~~~ 442 (464)
+.+++.||.++ .+.+||..+..|..+........ .....+. - ++.+.+.|+.+ .|..||+++
T Consensus 261 ~~~l~s~~~dg------~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 261 NGLIASVGADG------VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TSCEEEEETTS------CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCEEEEEeCCC------EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 34566666544 68899998888977644322221 1222211 1 46667777665 577777653
No 73
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.99 E-value=9.5 Score=35.13 Aligned_cols=65 Identities=18% Similarity=0.122 Sum_probs=36.5
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeC-CCceEEEeCCCCcEE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSE-TDKLAGYDIERGFWI 446 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG-~~~v~~YD~~~~~W~ 446 (464)
.++.++++|+.++ .+.+||..+..=..+.. ........ ..-++.+++.++ ...|..||..+++-.
T Consensus 234 ~~~~~l~~~~~~~------~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 234 PTGEWLAVGMESS------NVEVLHVNKPDKYQLHL---HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp TTSSEEEEEETTS------CEEEEETTSSCEEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCC------cEEEEECCCCCeEEEcC---CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 3456677776543 68899998775333321 11112222 222455555554 457889998877644
No 74
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.81 E-value=10 Score=35.12 Aligned_cols=65 Identities=9% Similarity=-0.001 Sum_probs=35.4
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCC-CcEEEec--cCCCCCC-cceEE-eEECC-EEEEEe-CCCceEEEeCC--CCcE
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQ--RLPVDFG-VVSSG-VVCNG-IFYVYS-ETDKLAGYDIE--RGFW 445 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t-~~W~~v~--~~p~~~~-~~~~~-v~~~g-~lYViG-G~~~v~~YD~~--~~~W 445 (464)
..||+.+.. -..+.+||..+ .+...+. ......+ ..... ..-++ .+|+.+ +.+.|..||+. ++.+
T Consensus 141 ~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~ 214 (343)
T 1ri6_A 141 RTLWVPALK------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 214 (343)
T ss_dssp SEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC
T ss_pred CEEEEecCC------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE
Confidence 467776532 23688999987 6666443 2221111 11112 12244 477776 45678889884 3444
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.57 E-value=9.7 Score=36.92 Aligned_cols=64 Identities=14% Similarity=0.098 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE--CCEEEEEeC---CCceEEEeCCCCcE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYSE---TDKLAGYDIERGFW 445 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~--~g~lYViGG---~~~v~~YD~~~~~W 445 (464)
++.+++.|+.++ .+.+||..+..=... +........+.+.. +..+++.|+ ...|..||..+++-
T Consensus 228 ~~~~l~s~~~d~------~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 228 DGLQLASGGNDN------VVQIWDARSSIPKFT--KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp TSSEEEEEETTS------CEEEEETTCSSEEEE--ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCCEEEEEeCCC------eEEEccCCCCCccEE--ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 566777777644 688999987543221 21111112222222 446777764 45788899877653
No 76
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.39 E-value=7.7 Score=37.25 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CC-EEEEEeCC-CceEEEeCCCCcE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NG-IFYVYSET-DKLAGYDIERGFW 445 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g-~lYViGG~-~~v~~YD~~~~~W 445 (464)
++.+++.|+.++ .|.+||..+.+ .+..+........+++.. ++ .+.+.|+. ..|..||..+++-
T Consensus 226 ~~~~l~sg~~dg------~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 226 QSEVFVFGDENG------TVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp CTTEEEEEETTS------EEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CCcceEEeccCC------cEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 456788887654 68889987653 232232222222222222 34 45555554 4688888877653
No 77
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.27 E-value=6.2 Score=37.95 Aligned_cols=59 Identities=8% Similarity=-0.028 Sum_probs=33.4
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE--ECCEEEEEeCC-CceEEEeCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~--~~g~lYViGG~-~~v~~YD~~~ 442 (464)
.++++.|+.++ .+.+||..+.+-.. .+... ....+++. .++.+++.||. ..|..||+.+
T Consensus 282 ~~~lasgs~D~------~i~iwd~~~~~~~~--~~~H~-~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 282 SPFLASISEDC------TVAVLDADFSEVFR--DLSHR-DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp SCCEEEEETTS------CEEEECTTSCEEEE--ECCCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCEEEEEeCCC------EEEEEECCCCcEeE--ECCCC-CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 35666676544 68899998775332 23221 22222222 25667776665 4788888754
No 78
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.15 E-value=12 Score=34.92 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=41.7
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.||+.+.. ...++.||+.+++...+.. .. ...-.+++. -++.+||.+.. +. .....++
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~-~~-~~~~~~i~~~~dg~l~v~~~~---------~~---~~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFV-SH-KANPAAIKIHKDGRLFVCYLG---------DF---KSTGGIF 115 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEE-CS-SSSEEEEEECTTSCEEEEECT---------TS---SSCCEEE
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEee-CC-CCCcceEEECCCCcEEEEeCC---------CC---CCCceEE
Confidence 4557766542 2368999999988876542 11 112233333 36788887641 10 1124689
Q ss_pred EEeCCCCCee
Q 046692 269 VFSPLTKSWR 278 (464)
Q Consensus 269 vydp~t~~W~ 278 (464)
+||+.++..+
T Consensus 116 ~~d~~~~~~~ 125 (333)
T 2dg1_A 116 AATENGDNLQ 125 (333)
T ss_dssp EECTTSCSCE
T ss_pred EEeCCCCEEE
Confidence 9999988765
No 79
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.81 E-value=12 Score=34.60 Aligned_cols=66 Identities=11% Similarity=-0.133 Sum_probs=39.5
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCC-cEEEeccCCCCCCcceEEeEECCEEEEEeCC-CceEEEeCCCC--cEEE
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSN-KWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-DKLAGYDIERG--FWIG 447 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~-~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~--~W~~ 447 (464)
..++.+++.... -..+.+||++-+ .|+.-.+ . ..+.+.+..+|.++|.+.. ..|..+|++++ .|+.
T Consensus 133 ~~~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~~--~--~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 133 NKKGNYLVPLFA------TSEVREIAPNGQLLNSVKLS--G--TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp CTTSCEEEEETT------TTEEEEECTTSCEEEEEECS--S--CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred CCCCCEEEEecC------CCEEEEECCCCCEEEEEECC--C--CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 345666665543 236899999733 4665432 1 1122333457888887654 47999999965 4664
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.77 E-value=8.1 Score=41.67 Aligned_cols=175 Identities=14% Similarity=0.082 Sum_probs=88.6
Q ss_pred ceEEeeCCCCceeeccccccC---CCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 207 EIHALDVSQDQWHRIDASILK---GRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~---~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
-+++||+.+++|......... ...-.+++. -++.|+|... ...+++||+.+++++....
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----------------~~Gl~~~~~~~~~~~~~~~ 532 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-----------------GGGVGIYTPDMQLVRKFNQ 532 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-----------------SSCEEEECTTCCEEEEECT
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-----------------CCCEEEEeCCCCeEEEccC
Confidence 478899999888776431111 111112222 2566766432 1237889999998877643
Q ss_pred CCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc-c---CCCCCCccc
Q 046692 283 MRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-S---LLPNRKSYK 358 (464)
Q Consensus 283 m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~---~l~~~~~~~ 358 (464)
...-......+++.+. +|+ |++-.. .| .+.+||+.++.++. . .++...-.+
T Consensus 533 ~~~l~~~~i~~i~~d~-------------~g~--lWi~T~-~G---------lv~~~d~~~~~~~~~~~~~gl~~~~i~~ 587 (781)
T 3v9f_A 533 YEGFCSNTINQIYRSS-------------KGQ--MWLATG-EG---------LVCFPSARNFDYQVFQRKEGLPNTHIRA 587 (781)
T ss_dssp TTTCSCSCEEEEEECT-------------TSC--EEEEET-TE---------EEEESCTTTCCCEEECGGGTCSCCCCCE
T ss_pred CCCCCCCeeEEEEECC-------------CCC--EEEEEC-CC---------ceEEECCCCCcEEEccccCCCCCceEEE
Confidence 1111112222232211 133 443321 22 12567777766544 1 122211111
Q ss_pred eecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEecc---CCCCCCcceEEeEE-CCEEEEEeCCCc
Q 046692 359 FIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR---LPVDFGVVSSGVVC-NGIFYVYSETDK 434 (464)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~---~p~~~~~~~~~v~~-~g~lYViGG~~~ 434 (464)
+ ..-.++.|++.+. +-+.+|||.+.+++.... ++.......+++.. +|.||+ |+.+.
T Consensus 588 i----------~~d~~g~lW~~t~--------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~G 648 (781)
T 3v9f_A 588 I----------SEDKNGNIWASTN--------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSING 648 (781)
T ss_dssp E----------EECSSSCEEEECS--------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EETTE
T ss_pred E----------EECCCCCEEEEcC--------CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEE-ECCCc
Confidence 1 1123567877642 246889999998887632 33321112222222 566655 66778
Q ss_pred eEEEeCCC
Q 046692 435 LAGYDIER 442 (464)
Q Consensus 435 v~~YD~~~ 442 (464)
+..|||+.
T Consensus 649 l~~f~p~~ 656 (781)
T 3v9f_A 649 LCFFNPDI 656 (781)
T ss_dssp EEEECSCC
T ss_pred eEEEChhh
Confidence 99999875
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.44 E-value=13 Score=34.32 Aligned_cols=62 Identities=10% Similarity=0.022 Sum_probs=35.1
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCCCcceEEeEE-C---CEEEEEeCC-CceEEEeCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVVC-N---GIFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~~~~~~~v~~-~---g~lYViGG~-~~v~~YD~~~ 442 (464)
+++++.|+.++ .+.+||..+. .|..+..+.........++.. + +.+++.|+. ..|..||+.+
T Consensus 170 ~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 170 SRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 45777787654 5777877654 466555554332222222222 2 366666655 4678888765
No 82
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=89.28 E-value=13 Score=34.21 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=34.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEecc-CCCC-CCcceEEeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR-LPVD-FGVVSSGVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~-~p~~-~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++..++.|+.++ .+.+||..+..-...-. .... ..........++.+++.|+. ..|..||+.+.+
T Consensus 203 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 203 NGKYILAATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp TSSEEEEEETTT------EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 455666666543 68899998765322211 1111 11111111235666667665 478889987764
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.15 E-value=11 Score=35.25 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=33.8
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCC-CcEEEeccCCCCCCcceEEeEE-CC----EEEEEeCC-CceEEEeCCC
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQRLPVDFGVVSSGVVC-NG----IFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t-~~W~~v~~~p~~~~~~~~~v~~-~g----~lYViGG~-~~v~~YD~~~ 442 (464)
++++.|+.++ .+.+||..+ ..|..+..+.........++.. ++ .+++.|+. ..|..||..+
T Consensus 180 ~~l~sgs~D~------~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 180 KRFASGGCDN------LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CBEECCBTTS------BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ceEEEecCCC------eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 5667776644 567788763 4687776655432222222111 22 45555554 4677788765
No 84
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.14 E-value=13 Score=33.86 Aligned_cols=69 Identities=6% Similarity=0.034 Sum_probs=40.1
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-C-ceEEEeCCCCcEEEc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-D-KLAGYDIERGFWIGI 448 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~-~v~~YD~~~~~W~~l 448 (464)
.++.||+.+.. ...+.+||+....-..+.. .......... +.-+|.|||.... + .|..||+....-..+
T Consensus 173 ~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~-~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 173 DKQEIFISDNR------AHCVKVFNYEGQYLRQIGG-EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp SSSEEEEEEGG------GTEEEEEETTCCEEEEESC-TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred CCCCEEEEECC------CCEEEEEcCCCCEEEEEcc-CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEE
Confidence 35789987643 2478999997654444432 1111122222 2236789998744 3 899999876543333
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.13 E-value=13 Score=36.52 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=38.0
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE--ECCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS--IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~--~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
++.+++.|+.+ ..+.+||..+.+-..+-........-.+++. .++.+++.|+. | ..+
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---------D-------~~v 189 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM---------E-------GTT 189 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS---------S-------SCE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---------C-------CEE
Confidence 45567777643 2588899887664433221111111123333 25566677772 2 247
Q ss_pred EEEeCCCCCeeecC
Q 046692 268 LVFSPLTKSWRKVA 281 (464)
Q Consensus 268 ~vydp~t~~W~~l~ 281 (464)
-+||..++....+.
T Consensus 190 ~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 190 RLQDFKGNILRVFA 203 (435)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEeeccCCceeEEe
Confidence 78898877654443
No 86
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.13 E-value=7.6 Score=37.14 Aligned_cols=69 Identities=10% Similarity=-0.028 Sum_probs=38.2
Q ss_pred eEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCCccccceEEE
Q 046692 192 WLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLV 269 (464)
Q Consensus 192 ~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~v 269 (464)
.+++.|+.+ ..+..||..+.+....-........-.+++.. ++.+++.|+. + ..+.+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------d-------~~i~i 145 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI---------R-------GATTL 145 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET---------T-------TEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC---------C-------CEEEE
Confidence 566666632 35889999887766543211111122233333 3466666662 2 35788
Q ss_pred EeCCCCCeeecC
Q 046692 270 FSPLTKSWRKVA 281 (464)
Q Consensus 270 ydp~t~~W~~l~ 281 (464)
||..++....+.
T Consensus 146 wd~~~~~~~~~~ 157 (383)
T 3ei3_B 146 RDFSGSVIQVFA 157 (383)
T ss_dssp EETTSCEEEEEE
T ss_pred EECCCCceEEEe
Confidence 998876655543
No 87
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.08 E-value=15 Score=34.53 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=43.6
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCCC-cEEEeccCCCCCCcceEE-eEECC-EEEEEeC-CCceEEE--eCCCCcEEEcc
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVSN-KWMEIQRLPVDFGVVSSG-VVCNG-IFYVYSE-TDKLAGY--DIERGFWIGIQ 449 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t~-~W~~v~~~p~~~~~~~~~-v~~~g-~lYViGG-~~~v~~Y--D~~~~~W~~l~ 449 (464)
.||+.+..+ +.+.+||...+ +++.+..++......... ..-+| .||+.+. .+.|..| |+++++-..+.
T Consensus 253 ~l~v~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 253 FLYVSNRGY------NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEEEEEETT------TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCC------CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 577766432 36788987633 666665555421112222 22245 5777764 3567777 88888877654
Q ss_pred c---CCCCcccc
Q 046692 450 T---SPFPPRVI 458 (464)
Q Consensus 450 ~---lp~pr~~~ 458 (464)
. +|.|-+.+
T Consensus 327 ~~~~~p~p~~~~ 338 (347)
T 3hfq_A 327 KDVTVPEGVCVR 338 (347)
T ss_dssp EEEECTTEEEEE
T ss_pred cceecCCCcEEE
Confidence 3 56665433
No 88
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.00 E-value=12 Score=33.46 Aligned_cols=63 Identities=13% Similarity=-0.024 Sum_probs=37.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEeC-CCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSE-TDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG-~~~v~~YD~~~~~ 444 (464)
+++||+.... ...+.+||+....-..... .........++ -+|.|||... .+.|..||+....
T Consensus 160 ~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 160 SGNVYVTDTD------NNRVVKLEAESNNQVVLPF--TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TCCEEEEEGG------GTEEEEECTTTCCEEECCC--SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCCEEEEECC------CCEEEEEecCCCceEeecc--cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 5678887643 2368899998776443311 11122222222 2568998863 5689999997754
No 89
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=88.99 E-value=0.13 Score=49.29 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=37.5
Q ss_pred CChHHHHHHHHhhCCcchhhhhhccccccccccCCchHHHH
Q 046692 142 FLPDDILEMCLVRLPLTSLMNARLVCKKWRYLTTTPRFLQM 182 (464)
Q Consensus 142 ~lp~dl~~~iL~rLp~~sl~~~~~vck~W~~l~~~~~f~~~ 182 (464)
.||+|++..||+.|+..+++++..+|+.|+.++..+...+.
T Consensus 7 ~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 7 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp HSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred hCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 47999999999999999999999999999999998877654
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.96 E-value=4.5 Score=43.62 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=39.9
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCc--EEE-eccCC-CCCCcceEEeEECCEEEEEeCC-CceEEEeCC-CCcEEEc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNK--WME-IQRLP-VDFGVVSSGVVCNGIFYVYSET-DKLAGYDIE-RGFWIGI 448 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~--W~~-v~~~p-~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~-~~~W~~l 448 (464)
+.+++.||.++ .+.+||+.+.. +.. +.... ......+.+..-++.+++.|+. ..|..||.. .+.|...
T Consensus 219 ~~~l~s~s~Dg------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~ 292 (753)
T 3jro_A 219 RSYLASVSQDR------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (753)
T ss_dssp SEEEEEEESSS------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCC
T ss_pred CCEEEEEecCC------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccc
Confidence 57888887654 67889887752 111 11111 1111112222236666666654 478889987 4577766
Q ss_pred ccCC
Q 046692 449 QTSP 452 (464)
Q Consensus 449 ~~lp 452 (464)
....
T Consensus 293 ~~~~ 296 (753)
T 3jro_A 293 GEVH 296 (753)
T ss_dssp CCBC
T ss_pred cccc
Confidence 5544
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=88.94 E-value=14 Score=35.76 Aligned_cols=75 Identities=12% Similarity=0.089 Sum_probs=38.6
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcE-EEeccCCCCCCcceEEeEE-CCEEEEEeC-CCceEEEeCCCCc--EEE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKW-MEIQRLPVDFGVVSSGVVC-NGIFYVYSE-TDKLAGYDIERGF--WIG 447 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W-~~v~~~p~~~~~~~~~v~~-~g~lYViGG-~~~v~~YD~~~~~--W~~ 447 (464)
.++.++++|..... -..+.+||..+..- .....+............- +..||+.|+ ...|..||..+++ -..
T Consensus 230 ~~~~~l~~g~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 230 SEGKILTTGFSRMS---ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHY 306 (402)
T ss_dssp STTEEEEEEECTTC---CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEE
T ss_pred CCCcEEEEeccCCC---CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEe
Confidence 45777777721111 23788999876431 1111222222222222122 345667774 5579999988766 444
Q ss_pred ccc
Q 046692 448 IQT 450 (464)
Q Consensus 448 l~~ 450 (464)
+..
T Consensus 307 l~~ 309 (402)
T 2aq5_A 307 LSM 309 (402)
T ss_dssp EEE
T ss_pred ecc
Confidence 433
No 92
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.93 E-value=27 Score=37.57 Aligned_cols=66 Identities=9% Similarity=0.115 Sum_probs=42.2
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEecc---CCCCCCcceEEeE-ECCEEEEEeCCCceEEEeCCCCcEEEc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR---LPVDFGVVSSGVV-CNGIFYVYSETDKLAGYDIERGFWIGI 448 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~---~p~~~~~~~~~v~-~~g~lYViGG~~~v~~YD~~~~~W~~l 448 (464)
.++.|++... .-+..||+.+++++.... +|.. ...+.+. -+|.|++.+ .+.+.+||++++++..+
T Consensus 552 ~~g~lWigT~--------~Gl~~~d~~~~~~~~~~~~~gl~~~--~i~~i~~d~~g~lWi~t-~~Gl~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 552 SNGIIWVGTR--------EGFYCFNEKDKQIKRYNTTNGLPNN--VVYGILEDSFGRLWLST-NRGISCFNPETEKFRNF 620 (795)
T ss_dssp TTSCEEEEES--------SCEEEEETTTTEEEEECGGGTCSCS--CEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEeC--------CCceeECCCCCcEEEeCCCCCCchh--heEEEEECCCCCEEEEc-CCceEEEcCCCCcEEEc
Confidence 3466776432 146899999999887642 3322 1222222 257777765 57899999999988765
Q ss_pred c
Q 046692 449 Q 449 (464)
Q Consensus 449 ~ 449 (464)
.
T Consensus 621 ~ 621 (795)
T 4a2l_A 621 T 621 (795)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.62 E-value=15 Score=33.80 Aligned_cols=66 Identities=5% Similarity=-0.080 Sum_probs=40.4
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLV 269 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~v 269 (464)
..||+++.. ...++.||+.++ ...+.. +. ..-.+++. -++.|||.... ...+.+
T Consensus 40 ~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~--~~-~~~~~l~~~~dg~l~v~~~~----------------~~~i~~ 94 (296)
T 3e5z_A 40 SAVIFSDVR-----QNRTWAWSDDGQ-LSPEMH--PS-HHQNGHCLNKQGHLIACSHG----------------LRRLER 94 (296)
T ss_dssp TEEEEEEGG-----GTEEEEEETTSC-EEEEES--SC-SSEEEEEECTTCCEEEEETT----------------TTEEEE
T ss_pred CEEEEEeCC-----CCEEEEEECCCC-eEEEEC--CC-CCcceeeECCCCcEEEEecC----------------CCeEEE
Confidence 446666542 236899999987 655543 11 11233333 36788877541 235899
Q ss_pred EeCCCCCeeecC
Q 046692 270 FSPLTKSWRKVA 281 (464)
Q Consensus 270 ydp~t~~W~~l~ 281 (464)
||+.+++.+.+.
T Consensus 95 ~d~~~g~~~~~~ 106 (296)
T 3e5z_A 95 QREPGGEWESIA 106 (296)
T ss_dssp ECSTTCCEEEEE
T ss_pred EcCCCCcEEEEe
Confidence 999998887654
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.45 E-value=7.3 Score=36.54 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=38.9
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCC---CcEEE--eccCCCCCCcceEEeEECCEEEEEeCC-CceEEEeCC-CCcEEEc
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVS---NKWME--IQRLPVDFGVVSSGVVCNGIFYVYSET-DKLAGYDIE-RGFWIGI 448 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t---~~W~~--v~~~p~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~-~~~W~~l 448 (464)
.+++.|+.++ .+.+||..+ +.|.. +.... ......+..-++.+.+.|+. ..|..|+.. .+.|..+
T Consensus 229 ~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~ 300 (316)
T 3bg1_A 229 STIASCSQDG------RVFIWTCDDASSNTWSPKLLHKFN--DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300 (316)
T ss_dssp CEEEEEETTC------EEEEEECSSTTCCCCBCCEEEECS--SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEE
T ss_pred ceEEEEcCCC------eEEEEEccCccccchhhhhhhcCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEe
Confidence 5677777654 678888765 34421 11111 11111111235666666654 467888865 5689988
Q ss_pred ccCCCCc
Q 046692 449 QTSPFPP 455 (464)
Q Consensus 449 ~~lp~pr 455 (464)
..+..+.
T Consensus 301 ~~~~~~~ 307 (316)
T 3bg1_A 301 SDVNKGQ 307 (316)
T ss_dssp EECC---
T ss_pred eeccCCC
Confidence 8776543
No 95
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.36 E-value=32 Score=37.42 Aligned_cols=84 Identities=12% Similarity=-0.050 Sum_probs=49.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCC--cEEEcc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERG--FWIGIQ 449 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~--~W~~l~ 449 (464)
.+++||+.-.. ...|+++|+....=+.+..-........+.++.++.|||.. +.+.|.++|..++ .=....
T Consensus 568 ~~~~LYwaD~~------~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 568 LSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred CCCeEEEEeCC------CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 46899998643 35789999875443333221111122223456899999987 4568999986554 222334
Q ss_pred cCCCCccccccCC
Q 046692 450 TSPFPPRVIEYYP 462 (464)
Q Consensus 450 ~lp~pr~~~~~~~ 462 (464)
.++.|..++-|+|
T Consensus 642 ~l~~P~~i~v~h~ 654 (791)
T 3m0c_C 642 NLLSPEDMVLFHN 654 (791)
T ss_dssp SCSCCCCEEEESG
T ss_pred CCCCceeEeeecc
Confidence 5666666555543
No 96
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=88.15 E-value=17 Score=34.24 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=37.0
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCC------CcEEEeccCCCCC-CcceEEeEECCEEEEEeC-CCceEEEeCCCCcEEE
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVS------NKWMEIQRLPVDF-GVVSSGVVCNGIFYVYSE-TDKLAGYDIERGFWIG 447 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t------~~W~~v~~~p~~~-~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~~W~~ 447 (464)
..++.|+.++ .+.+||..+ ..|..+..++... .....++...+.+++.|+ -..|..||..++.|..
T Consensus 212 ~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~ 285 (330)
T 2hes_X 212 FRLCSGSDDS------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKV 285 (330)
T ss_dssp CEEEEEETTS------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEEeCCC------eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEE
Confidence 4566666543 566676643 3566665554311 122222222333444444 4578999998888865
Q ss_pred cc
Q 046692 448 IQ 449 (464)
Q Consensus 448 l~ 449 (464)
+.
T Consensus 286 ~~ 287 (330)
T 2hes_X 286 FA 287 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 97
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.10 E-value=12 Score=35.96 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=35.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECC-EEEEEeCC-CceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNG-IFYVYSET-DKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g-~lYViGG~-~~v~~YD~~~~~W~ 446 (464)
++.+++.|+.++ .+.+||..+.+ .+..+........+.+. .++ .+.+.|+. ..|..||..+++-.
T Consensus 238 ~~~~la~g~~d~------~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 238 KDDTFACGDETG------NVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp STTEEEEEESSS------CEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred ccceEEEeeccc------ceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 356777777643 67889987653 12222222122222222 244 45555554 47888998877543
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.04 E-value=8.5 Score=41.07 Aligned_cols=65 Identities=9% Similarity=-0.027 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE--CCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~--~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.++++|+.++ .+.+||..+..-................... ++.++++|+. ..|..||..++.
T Consensus 152 ~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 152 DPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 456777777644 6889998665422211111111222221122 5666666654 478888887654
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=87.96 E-value=17 Score=33.80 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=35.5
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEeC-CCceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSE-TDKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG-~~~v~~YD~~~~~W~ 446 (464)
++.++++|+.++ .+.+||..++ ...+..+..........+. -++.+++.++ ...|..||..+..-.
T Consensus 186 ~~~~l~~~~~dg------~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 186 KGKYIIAGHKDG------KISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp GGCEEEEEETTS------EEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEcCCC------EEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 456667776543 6899999873 1222222221122222212 2555555554 457889998876543
No 100
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=87.85 E-value=13 Score=38.84 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=37.6
Q ss_pred CceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE-EEEEe-CCCceEEEeCCCCcEE---Ec-ccCCCC
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYS-ETDKLAGYDIERGFWI---GI-QTSPFP 454 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~-lYViG-G~~~v~~YD~~~~~W~---~l-~~lp~p 454 (464)
..+.+.|........+..++.....+..+..-+|+ +|+.. +.+.|..+|..+++=. .+ ...|.|
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 46778888776655555554443333333333554 45543 5689999999987532 23 345655
No 101
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.62 E-value=21 Score=38.25 Aligned_cols=179 Identities=11% Similarity=0.004 Sum_probs=92.8
Q ss_pred ceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCC
Q 046692 207 EIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRY 285 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~ 285 (464)
-++.||+.++++..+.........-.+++.- ++.|+|... ..+++||+.+++|+.......
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~------------------~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH------------------AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET------------------TEEEEEESSSSSCCEEECTTT
T ss_pred CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC------------------CceEEEeCCCCeEEecccCcc
Confidence 4678888888887765411111112223222 466666422 348999999999877643220
Q ss_pred -C-ccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc-cC---CCCCCccce
Q 046692 286 -A-RSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SL---LPNRKSYKF 359 (464)
Q Consensus 286 -~-R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~-~~---l~~~~~~~~ 359 (464)
. -.....++..+. +|+ |++-.-.. -+.+||+.++.++. .. ++...-..
T Consensus 490 ~~~~~~~i~~i~~d~-------------~g~--lWigt~~~----------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~- 543 (781)
T 3v9f_A 490 SQLLENFVRSIAQDS-------------EGR--FWIGTFGG----------GVGIYTPDMQLVRKFNQYEGFCSNTINQ- 543 (781)
T ss_dssp SSCSCSCEEEEEECT-------------TCC--EEEEESSS----------CEEEECTTCCEEEEECTTTTCSCSCEEE-
T ss_pred cccccceeEEEEEcC-------------CCC--EEEEEcCC----------CEEEEeCCCCeEEEccCCCCCCCCeeEE-
Confidence 0 012222222211 133 44432111 24567777776665 11 11111000
Q ss_pred ecccccccccccccCcEEEEEcCCCCCCCccCce-EEEeCCCCcEEEecc---CCCCCCcceEEeE-ECCEEEEEeCCCc
Q 046692 360 IRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSG-EIYDSVSNKWMEIQR---LPVDFGVVSSGVV-CNGIFYVYSETDK 434 (464)
Q Consensus 360 ~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~v-evYD~~t~~W~~v~~---~p~~~~~~~~~v~-~~g~lYViGG~~~ 434 (464)
-..-.++.|++... .-+ ..||+.+++++.... +|... ..+.+. -+|.|++. ..+.
T Consensus 544 ---------i~~d~~g~lWi~T~--------~Glv~~~d~~~~~~~~~~~~~gl~~~~--i~~i~~d~~g~lW~~-t~~G 603 (781)
T 3v9f_A 544 ---------IYRSSKGQMWLATG--------EGLVCFPSARNFDYQVFQRKEGLPNTH--IRAISEDKNGNIWAS-TNTG 603 (781)
T ss_dssp ---------EEECTTSCEEEEET--------TEEEEESCTTTCCCEEECGGGTCSCCC--CCEEEECSSSCEEEE-CSSC
T ss_pred ---------EEECCCCCEEEEEC--------CCceEEECCCCCcEEEccccCCCCCce--EEEEEECCCCCEEEE-cCCc
Confidence 01113466776432 235 789999998877632 33321 222222 25777765 4678
Q ss_pred eEEEeCCCCcEEEcc
Q 046692 435 LAGYDIERGFWIGIQ 449 (464)
Q Consensus 435 v~~YD~~~~~W~~l~ 449 (464)
+.+||++++++....
T Consensus 604 l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 604 ISCYITSKKCFYTYD 618 (781)
T ss_dssp EEEEETTTTEEEEEC
T ss_pred eEEEECCCCceEEec
Confidence 999999998887754
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.21 E-value=12 Score=38.62 Aligned_cols=67 Identities=9% Similarity=-0.063 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE-EEEEe-CCCceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYS-ETDKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~-lYViG-G~~~v~~YD~~~~~W~ 446 (464)
+..+|+.... ...+.++|..+.+-..+..++.....+..+..-+|+ +|+.+ +.+.|..+|..+++-.
T Consensus 291 ~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 291 HPEFIVNVKE------TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp SSEEEEEETT------TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCEEEEEECC------CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 3455555432 247888888764321111122211122222223554 66655 3578999999988644
No 103
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.77 E-value=21 Score=34.13 Aligned_cols=58 Identities=9% Similarity=-0.048 Sum_probs=31.7
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-C-CEEEEEeCC-CceEEEeCCC
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-N-GIFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~-g~lYViGG~-~~v~~YD~~~ 442 (464)
.+++.|+.++ .+.+||..+.+-.. +........+++.. + ..|++.||. ..|..+++.+
T Consensus 271 ~~lasgs~D~------~i~vwd~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 271 PFLASLSEDC------SLAVLDSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CCEEEEETTS------CEEEECTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred eEEEEEeCCC------eEEEEECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 5666676644 68899988775322 22111222222221 3 456666665 4777787765
No 104
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=86.65 E-value=20 Score=36.36 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=37.4
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLV 269 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~v 269 (464)
++.+|+|-| +..|.||..+++...-. .+..+. --++....+++|++-| +..++
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~-w~gi~~-iDAA~~~~g~~YfFkG------------------~~y~r 210 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERS-WPAVGN-CTSALRWLGRYYCFQG------------------NQFLR 210 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEEC-CTTSCC-CSEEEEETTEEEEEET------------------TEEEE
T ss_pred CCeEEEEec-------ccEEEEecccceeeccc-CCCCCc-cchheeeCCceEEEEC------------------CEEEE
Confidence 455666665 35789999887654211 111222 2345555799999988 24789
Q ss_pred EeCCCCC
Q 046692 270 FSPLTKS 276 (464)
Q Consensus 270 ydp~t~~ 276 (464)
||+.+++
T Consensus 211 fd~~~~~ 217 (460)
T 1qhu_A 211 FNPVSGE 217 (460)
T ss_dssp ECTTTCC
T ss_pred EcCccCc
Confidence 9987754
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.22 E-value=25 Score=33.84 Aligned_cols=64 Identities=13% Similarity=0.038 Sum_probs=36.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEec-cCCCCCCcceEEeEECCEEEEEe---C-CCceEEEeCCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ-RLPVDFGVVSSGVVCNGIFYVYS---E-TDKLAGYDIERG 443 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~-~~p~~~~~~~~~v~~~g~lYViG---G-~~~v~~YD~~~~ 443 (464)
++.+++.|+.++ .+.+||+.+.+-...- ..............-++.+++.| + ...|..||..+.
T Consensus 187 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 187 DGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp TSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred CCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 556677776543 6899999887533221 11111112222223477877777 2 347888888764
No 106
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.21 E-value=19 Score=32.58 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=40.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEe-ccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEI-QRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v-~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~W~ 446 (464)
++.||+.... .+.+.+||+....=..+ ..+..+ ...+.-++.|||.. +.+.|.+||+.+++-.
T Consensus 178 ~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~~P----~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 178 SSQLCWVDAG------THRAECLNPAQPGRRKVLEGLQYP----FAVTSYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp TTEEEEEETT------TTEEEEEETTEEEEEEEEECCCSE----EEEEEETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEECC------CCEEEEEecCCCceEEEecCCCCc----eEEEEeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 5789998643 34789999975432222 222222 22335689999986 4578999999877643
No 107
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=86.16 E-value=38 Score=35.94 Aligned_cols=69 Identities=16% Similarity=0.218 Sum_probs=42.8
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCc--eeeccccccC-------CCcceEEEEECCEEEEEcCCcCCccCccccC
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQ--WHRIDASILK-------GRFMFSVVSIMDDVYVVGGCSSLTSFGRVDR 258 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~--W~~l~~~~~~-------~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~ 258 (464)
..++.||+... .+.++++|..+.+ |+.-...... .....+.+..++.||+... +
T Consensus 75 v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~----------d- 137 (677)
T 1kb0_A 75 VVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW----------D- 137 (677)
T ss_dssp EETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT----------T-
T ss_pred EECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC----------C-
Confidence 34667777654 2468999998865 8764331110 0122345667899988754 1
Q ss_pred CCccccceEEEEeCCCCC--eee
Q 046692 259 SSFKTHKGVLVFSPLTKS--WRK 279 (464)
Q Consensus 259 ~~~~~~~~v~vydp~t~~--W~~ 279 (464)
..++.+|..|++ |+.
T Consensus 138 ------g~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 138 ------GRLIALDAATGKEVWHQ 154 (677)
T ss_dssp ------SEEEEEETTTCCEEEEE
T ss_pred ------CEEEEEECCCCCEEeee
Confidence 248889998876 765
No 108
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.11 E-value=22 Score=33.96 Aligned_cols=63 Identities=11% Similarity=0.004 Sum_probs=35.9
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCC----CCcceEEeEE-CC-EEEEEeCCC----ceEEEeCCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD----FGVVSSGVVC-NG-IFYVYSETD----KLAGYDIERG 443 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~----~~~~~~~v~~-~g-~lYViGG~~----~v~~YD~~~~ 443 (464)
+.+++.|+.++ .+.+||..+..-...-..+.. .......+.. ++ .+++.|+.+ .|..||+.+.
T Consensus 178 ~~~l~~~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSSN------FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSSS------CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CcEEEEEcCCC------CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 46777777644 689999988765443222211 1122222222 33 466666544 8999998874
No 109
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=84.85 E-value=23 Score=32.35 Aligned_cols=57 Identities=18% Similarity=0.209 Sum_probs=34.5
Q ss_pred cceEEeeCCCCceeecccccc--CCCcceEEEEE-C-CEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeec
Q 046692 206 GEIHALDVSQDQWHRIDASIL--KGRFMFSVVSI-M-DDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKV 280 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~--~~R~~~s~~~~-~-~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l 280 (464)
..++.||+.++++..+..+.. ....-.+++.. + +.|||.... +.+++||+. ++...+
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-----------------~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-----------------LGLLVVQTD-GTFEEI 106 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-----------------TEEEEEETT-SCEEEC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-----------------CCEEEEeCC-CCEEEE
Confidence 468999999988876543000 11112233332 4 788887641 258899998 777665
No 110
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=84.66 E-value=29 Score=33.36 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=31.5
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceE-EeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~-~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
.+.+||..+.....+..++........ ...-++.+.+.|+. ..|..||+.+++
T Consensus 328 ~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 788999988877766544432222222 22235666666654 478889987765
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=84.15 E-value=30 Score=33.09 Aligned_cols=66 Identities=14% Similarity=0.029 Sum_probs=34.8
Q ss_pred cccCcEEEEEcCCCCCCCccCceEEEeCCCCc--EEEe-ccCC----CCCC-cceEEeEECC----EEEEEeCCCceEEE
Q 046692 371 ASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNK--WMEI-QRLP----VDFG-VVSSGVVCNG----IFYVYSETDKLAGY 438 (464)
Q Consensus 371 ~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~--W~~v-~~~p----~~~~-~~~~~v~~~g----~lYViGG~~~v~~Y 438 (464)
...++.+++.|+.++ .+.+||..... .... ...+ .... ....+...++ .|+++|....+..|
T Consensus 342 ~~~~~~~l~s~~~d~------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 342 YFAAGALFVSSGFDT------SIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp EEETTEEEEEETTTE------EEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred EeCCCCEEEEecCCc------cEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 445677888887654 57788865421 0000 0000 0111 1111222344 48889887888888
Q ss_pred eCCC
Q 046692 439 DIER 442 (464)
Q Consensus 439 D~~~ 442 (464)
+++.
T Consensus 416 ~~~~ 419 (420)
T 3vl1_A 416 NLSN 419 (420)
T ss_dssp ESCC
T ss_pred eccC
Confidence 8764
No 112
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=84.15 E-value=34 Score=33.62 Aligned_cols=83 Identities=12% Similarity=-0.059 Sum_probs=48.5
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCc--EEEcc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGF--WIGIQ 449 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~--W~~l~ 449 (464)
.+++||+.... ...|+++|.....-+.+...+.......+.++.++.||+.. +.+.|.++|..+++ -....
T Consensus 256 ~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 256 LSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred CCCEEEEEECC------CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 46899998643 45789999875543444332222222333456899999986 45789999965442 12223
Q ss_pred cCCCCccccccC
Q 046692 450 TSPFPPRVIEYY 461 (464)
Q Consensus 450 ~lp~pr~~~~~~ 461 (464)
.++.|..++-|+
T Consensus 330 ~~~~p~~i~v~~ 341 (400)
T 3p5b_L 330 NLLSPEDMVLFH 341 (400)
T ss_dssp SCSCEEEEEEES
T ss_pred CCCCCceEEEEe
Confidence 344454444444
No 113
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=83.97 E-value=16 Score=34.71 Aligned_cols=64 Identities=17% Similarity=0.034 Sum_probs=35.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCC-CC---CCcceEEe-EECCEEEEEeCC----CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP-VD---FGVVSSGV-VCNGIFYVYSET----DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p-~~---~~~~~~~v-~~~g~lYViGG~----~~v~~YD~~~~~ 444 (464)
++ ++++|+.++ .+.+||..+..-...-... .. .......+ .-++.+++.|+. ..|..||+.+.+
T Consensus 197 ~~-~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 197 RG-LIATGFNNG------TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp TS-EEEEECTTS------EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred Cc-eEEEEeCCC------cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 45 777776543 6889999877543321110 01 11222221 225666666654 488999987654
No 114
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=83.94 E-value=23 Score=31.58 Aligned_cols=185 Identities=7% Similarity=-0.067 Sum_probs=90.3
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.||+... ...++.||+.......+.. .....-.+++.- ++.|||.... ...+.
T Consensus 77 ~g~l~v~~~------~~~i~~~d~~~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~----------------~~~i~ 132 (270)
T 1rwi_B 77 AGTVYVTDF------NNRVVTLAAGSNNQTVLPF--DGLNYPEGLAVDTQGAVYVADRG----------------NNRVV 132 (270)
T ss_dssp TCCEEEEET------TTEEEEECTTCSCCEECCC--CSCSSEEEEEECTTCCEEEEEGG----------------GTEEE
T ss_pred CCCEEEEcC------CCEEEEEeCCCceEeeeec--CCcCCCcceEECCCCCEEEEECC----------------CCEEE
Confidence 345676643 1368899998876554432 111122334433 6789988641 23578
Q ss_pred EEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc
Q 046692 269 VFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (464)
Q Consensus 269 vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~ 348 (464)
+||+.+.......... ......+++-. + |+ ||+.... ...+.+||+....-..
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~p~~i~~~~-~--------------g~--l~v~~~~---------~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFTG-LNDPDGVAVDN-S--------------GN--VYVTDTD---------NNRVVKLEAESNNQVV 185 (270)
T ss_dssp EECTTCCSCEECCCCS-CCSCCCEEECT-T--------------CC--EEEEEGG---------GTEEEEECTTTCCEEE
T ss_pred EEECCCceeEeecccc-CCCceeEEEeC-C--------------CC--EEEEECC---------CCEEEEEecCCCceEe
Confidence 8887766554332111 11112222221 1 33 6765432 1345667765543221
Q ss_pred cCCCCCCccceeccccccccccc-ccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEE
Q 046692 349 SLLPNRKSYKFIRQKSDQSITKA-SKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIF 426 (464)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~l 426 (464)
....... . ..+.+ -.++.||+....+ ..+.+||+....-..... . ........++ -+|.|
T Consensus 186 ~~~~~~~-~---------p~~i~~d~~g~l~v~~~~~------~~v~~~~~~~~~~~~~~~-~-~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 186 LPFTDIT-A---------PWGIAVDEAGTVYVTEHNT------NQVVKLLAGSTTSTVLPF-T-GLNTPLAVAVDSDRTV 247 (270)
T ss_dssp CCCSSCC-S---------EEEEEECTTCCEEEEETTT------SCEEEECTTCSCCEECCC-C-SCSCEEEEEECTTCCE
T ss_pred ecccCCC-C---------ceEEEECCCCCEEEEECCC------CcEEEEcCCCCcceeecc-C-CCCCceeEEECCCCCE
Confidence 1100000 0 01112 2345888876432 368899997664333211 1 1122222222 35789
Q ss_pred EEEe-CCCceEEEeCCCC
Q 046692 427 YVYS-ETDKLAGYDIERG 443 (464)
Q Consensus 427 YViG-G~~~v~~YD~~~~ 443 (464)
||.. +.+.|..|+....
T Consensus 248 ~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEEGGGTEEEEECCCGG
T ss_pred EEEECCCCEEEEEcCCCc
Confidence 9886 4568898887643
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=83.56 E-value=35 Score=33.42 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=33.7
Q ss_pred CceEEEeC--C-CCcEEEeccCCCCCCcceEEeEECCEEEEEeCC--------C--ceEEEeCCCCcEE
Q 046692 391 DSGEIYDS--V-SNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET--------D--KLAGYDIERGFWI 446 (464)
Q Consensus 391 ~~vevYD~--~-t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~--------~--~v~~YD~~~~~W~ 446 (464)
..+.+||. . ..++..+..++.. ......+...+.+++..+. + .++.++.+++.|.
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 36788888 3 3566666655544 3333344556777776543 1 5666778888885
No 116
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.93 E-value=35 Score=36.64 Aligned_cols=59 Identities=7% Similarity=-0.107 Sum_probs=36.8
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcEEEccc
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFWIGIQT 450 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~l~~ 450 (464)
.+..||+.+++++.+...+..........--+|.|+|....+.+..||+.++++..+..
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECC
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeec
Confidence 46789999998887643222111111122347788876545579999999998887643
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=82.31 E-value=20 Score=33.88 Aligned_cols=22 Identities=9% Similarity=0.305 Sum_probs=14.9
Q ss_pred CCEEEEEeC-CCceEEEeCCCCc
Q 046692 423 NGIFYVYSE-TDKLAGYDIERGF 444 (464)
Q Consensus 423 ~g~lYViGG-~~~v~~YD~~~~~ 444 (464)
++..++.|+ ...|..||+.+..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCEEEEecCCCeEEEEECCCCc
Confidence 555555554 4579999988765
No 118
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=82.16 E-value=34 Score=32.19 Aligned_cols=80 Identities=13% Similarity=-0.077 Sum_probs=47.5
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCcE-EEc-c
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGFW-IGI-Q 449 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~W-~~l-~ 449 (464)
.+++||+.... ...|+++|+....=+.+...+.........++.++.||+.- +.+.|.++|+.+++- +.+ .
T Consensus 174 ~~~~lY~~D~~------~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 174 LSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred cCCEEEEEECC------CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 36799998653 34789999875443444332211222333446789999986 457899999865542 222 2
Q ss_pred cCCCCcccc
Q 046692 450 TSPFPPRVI 458 (464)
Q Consensus 450 ~lp~pr~~~ 458 (464)
.++.|..+.
T Consensus 248 ~~~~p~~i~ 256 (316)
T 1ijq_A 248 NLLSPEDMV 256 (316)
T ss_dssp SCSCCCCEE
T ss_pred CCCCceEEE
Confidence 345554443
No 119
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=81.95 E-value=34 Score=32.07 Aligned_cols=68 Identities=7% Similarity=-0.035 Sum_probs=39.0
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeC--------CCceEEEeCCCCcEE
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE--------TDKLAGYDIERGFWI 446 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG--------~~~v~~YD~~~~~W~ 446 (464)
+.||+....+ ..|.+||+.+.+....-..+.........+...+.+|+..| ...|..||+.+++..
T Consensus 208 g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 208 DQLCVADREN------GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp TEEEEEETTT------TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 7999987543 37899999877654432222111111112233355565544 237889998877655
Q ss_pred Ec
Q 046692 447 GI 448 (464)
Q Consensus 447 ~l 448 (464)
..
T Consensus 282 ~~ 283 (329)
T 3fvz_A 282 DV 283 (329)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.95 E-value=34 Score=32.06 Aligned_cols=65 Identities=18% Similarity=0.272 Sum_probs=38.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCC-CCCcceEEe-EECCEEEEEeCCCceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV-DFGVVSSGV-VCNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~-~~~~~~~~v-~~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
.++.+++.|+.++ .+.+||..+..-.. ..+.. ......... .-++.+.+.|+.+.|..||+.+..
T Consensus 180 pdg~~lasg~~dg------~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 180 KDSLLLALYSPDG------ILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp TTSCEEEEECTTS------CEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCEEEEEcCCC------EEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 4577888887654 68999998775320 12222 112222221 226666666666689999987653
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.35 E-value=32 Score=31.31 Aligned_cols=63 Identities=13% Similarity=0.017 Sum_probs=36.4
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CC----EEEEEeCC-CceEEEeCCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NG----IFYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g----~lYViGG~-~~v~~YD~~~~ 443 (464)
+.++++|+.++ .+..++........+..++........++.. ++ .+++.|+. ..|..||+.+.
T Consensus 182 ~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 182 PEKLAVSALEQ------AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CCEEEEEETTE------EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CcEEEEecCCC------cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 56777776543 3455666777776665555433333232222 44 67777665 46888887654
No 122
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=81.20 E-value=0.5 Score=45.28 Aligned_cols=41 Identities=29% Similarity=0.420 Sum_probs=35.6
Q ss_pred cCCCCChHHHHHHHHhhCCcchhhhhhccccccccccCCch
Q 046692 138 RMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRYLTTTPR 178 (464)
Q Consensus 138 rl~~~lp~dl~~~iL~rLp~~sl~~~~~vck~W~~l~~~~~ 178 (464)
+.+..||+|++..||.+|+..++.++..+|++|+.+...+.
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 34567999999999999999999999999999998875443
No 123
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.85 E-value=34 Score=31.36 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=37.4
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCC--CcEEEeccC-C-CCCCcceEEeEECCEEEEEeCC-CceEEEeCC-CCcEEEc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVS--NKWMEIQRL-P-VDFGVVSSGVVCNGIFYVYSET-DKLAGYDIE-RGFWIGI 448 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t--~~W~~v~~~-p-~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~-~~~W~~l 448 (464)
+.+++.|+.++ .+.+||..+ ..|....-. . ........+..-++.+++.|+. ..|..|+.. .+.|..+
T Consensus 219 ~~~las~s~D~------~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 219 RSYMASVSQDR------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp SEEEEEEETTS------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred ceEEEEEECCC------cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 36777777654 677888765 346532110 1 1111111111236666666654 467778765 5689887
Q ss_pred ccC
Q 046692 449 QTS 451 (464)
Q Consensus 449 ~~l 451 (464)
..+
T Consensus 293 ~~~ 295 (297)
T 2pm7_B 293 GEV 295 (297)
T ss_dssp ---
T ss_pred ccc
Confidence 664
No 124
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=80.70 E-value=38 Score=31.82 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=40.7
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCC---CCCCcceEE-eEECC-EEEEEeC--CCceEEEeC--CCCcEE
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP---VDFGVVSSG-VVCNG-IFYVYSE--TDKLAGYDI--ERGFWI 446 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p---~~~~~~~~~-v~~~g-~lYViGG--~~~v~~YD~--~~~~W~ 446 (464)
.||+.+..+ +.+.+||..+++++.+..++ ......... ..-+| .||+... .+.|..|+. .++.+.
T Consensus 224 ~l~v~~~~~------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~ 297 (361)
T 3scy_A 224 FAYLINEIG------GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT 297 (361)
T ss_dssp EEEEEETTT------CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE
T ss_pred EEEEEcCCC------CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE
Confidence 577766332 36889998888776664432 221112222 12255 4777653 467778776 467777
Q ss_pred EcccCC
Q 046692 447 GIQTSP 452 (464)
Q Consensus 447 ~l~~lp 452 (464)
.+..++
T Consensus 298 ~~~~~~ 303 (361)
T 3scy_A 298 KVGYQL 303 (361)
T ss_dssp EEEEEE
T ss_pred EeeEec
Confidence 665544
No 125
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.35 E-value=12 Score=39.87 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=42.5
Q ss_pred cccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCC--CCCcceEEeEECCEEEEEeC------CCceEEEeC
Q 046692 371 ASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPV--DFGVVSSGVVCNGIFYVYSE------TDKLAGYDI 440 (464)
Q Consensus 371 ~~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~--~~~~~~~~v~~~g~lYViGG------~~~v~~YD~ 440 (464)
++.+++||+... -..+.++|..+. .|+.-..... ......+.++.++.+|+-.+ ...|.+||.
T Consensus 118 ~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~ 190 (689)
T 1yiq_A 118 AVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDA 190 (689)
T ss_dssp EEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred EEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEEC
Confidence 345567777542 135788888776 4876532111 11222223567999988532 247999999
Q ss_pred CCCc--EEEc
Q 046692 441 ERGF--WIGI 448 (464)
Q Consensus 441 ~~~~--W~~l 448 (464)
.+++ |+.-
T Consensus 191 ~tG~~~W~~~ 200 (689)
T 1yiq_A 191 ETGKEAWRFY 200 (689)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 8875 8753
No 126
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=79.90 E-value=32 Score=30.48 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=35.4
Q ss_pred ccceEEeeCCCCceeeccccccCCCcceEEE-EECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCC-CCeeecCC
Q 046692 205 SGEIHALDVSQDQWHRIDASILKGRFMFSVV-SIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLT-KSWRKVAS 282 (464)
Q Consensus 205 ~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~-~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t-~~W~~l~~ 282 (464)
...++.||+.+++...+.. . ...-.+++ ..++..+++++ ...+++||+.+ ++...+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~-~--~~~v~~~~~spdg~~l~~~~-----------------~~~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQ-T--PELFEAPNWSPDGKYLLLNS-----------------EGLLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CEEEEEEETTTTEEEEEEE-E--SSCCEEEEECTTSSEEEEEE-----------------TTEEEEEESSSCCSCEECCC
T ss_pred ceeEEEEeCCCCceeeecc-C--CcceEeeEECCCCCEEEEEc-----------------CCeEEEEeCCCCCCceEecc
Confidence 3578999999988776544 1 11112222 23566555554 12589999998 77766553
No 127
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=79.88 E-value=38 Score=31.38 Aligned_cols=64 Identities=8% Similarity=-0.260 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCC-Cc---EEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCcEEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVS-NK---WMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGFWIG 447 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t-~~---W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~W~~ 447 (464)
++.||+..-. ...+.+||+.. .+ .+.+..+..+.+ .++--+|.|||.. +.+.|.+||++ ++...
T Consensus 178 g~~lyv~d~~------~~~I~~~~~~~~g~~~~~~~~~~~~~P~g---i~vd~dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 178 GNFLYVSNTE------KMLLLRIPVDSTDKPGEPEIFVEQTNIDD---FAFDVEGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp TTEEEEEETT------TTEEEEEEBCTTSCBCCCEEEEESCCCSS---EEEBTTCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred CCEEEEEeCC------CCEEEEEEeCCCCCCCccEEEeccCCCCC---eEECCCCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 4578887643 34788999864 22 222222222222 1223378899875 45789999997 44433
No 128
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=79.74 E-value=35 Score=30.79 Aligned_cols=67 Identities=18% Similarity=0.235 Sum_probs=37.1
Q ss_pred EEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcEEEcccC
Q 046692 378 IAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFWIGIQTS 451 (464)
Q Consensus 378 yviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~l~~l 451 (464)
++.|+.++ .+.+||..+.+-...-..+.. ...+....-++.+++.+....|..||+.++++.....+
T Consensus 239 l~~~~~dg------~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 239 IVSCGEDR------TVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp EEEEETTS------EEEEECTTTCCEEEEEECSSS-CEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC----
T ss_pred EEEEecCC------EEEEEECCCCceeEEEeccCc-eEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhhh
Confidence 55565543 689999988765443222221 11222223366655544456899999998887654443
No 129
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=78.85 E-value=40 Score=30.99 Aligned_cols=64 Identities=14% Similarity=0.007 Sum_probs=33.1
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEE-EECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVV-SIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~-~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
.+.+++.|+.+ ..+..||..+..-...-. .... .-.+++ ..++.+.+.|+. + ..+.
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~-~~~~-~v~~~~~~~~~~~l~s~s~---------d-------~~i~ 80 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQ-VTET-PVRAGKFIARKNWIIVGSD---------D-------FRIR 80 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEE-CCSS-CEEEEEEEGGGTEEEEEET---------T-------SEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEee-ccCC-cEEEEEEeCCCCEEEEECC---------C-------CEEE
Confidence 34455555532 357888988765432111 0111 111222 225566666662 2 3588
Q ss_pred EEeCCCCC
Q 046692 269 VFSPLTKS 276 (464)
Q Consensus 269 vydp~t~~ 276 (464)
+||..+++
T Consensus 81 vwd~~~~~ 88 (304)
T 2ynn_A 81 VFNYNTGE 88 (304)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 89988875
No 130
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.54 E-value=0.32 Score=38.95 Aligned_cols=24 Identities=13% Similarity=0.021 Sum_probs=20.3
Q ss_pred cccccccC--ccccchhhhhhcccCC
Q 046692 117 EKFWKKSN--RKYLELEDSVRNSRMH 140 (464)
Q Consensus 117 ~~~W~~~~--~r~~~l~~ll~~vrl~ 140 (464)
.++|++|| .|.+|+++||++||.+
T Consensus 75 v~~Wv~~d~~~R~~~~~~Ll~~VR~~ 100 (105)
T 2eqx_A 75 IEAWINFNKEEREAFAESLRTSLKEI 100 (105)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 35699999 5778999999999964
No 131
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.50 E-value=50 Score=31.96 Aligned_cols=25 Identities=12% Similarity=0.038 Sum_probs=17.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWM 404 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~ 404 (464)
++.+++.|+.++ .+.+||..+....
T Consensus 245 ~g~~l~s~s~D~------~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 245 DGTLIASCSNDQ------TVRVWVVATKECK 269 (410)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEE
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcee
Confidence 456777777654 6788888776543
No 132
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.35 E-value=14 Score=39.27 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=41.9
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCC-CCCcceEEeEECCEEEEEeC------CCceEEEeCCC
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPV-DFGVVSSGVVCNGIFYVYSE------TDKLAGYDIER 442 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~-~~~~~~~~v~~~g~lYViGG------~~~v~~YD~~~ 442 (464)
+.+++||+... -..+.++|..+. .|+.-..-+. ......+.++.++.+|+-.+ ...|.+||..+
T Consensus 115 ~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 115 LWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp EEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred EECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCC
Confidence 44567777532 136788998776 4876532111 11122223467999988543 24799999987
Q ss_pred Cc--EEE
Q 046692 443 GF--WIG 447 (464)
Q Consensus 443 ~~--W~~ 447 (464)
++ |+.
T Consensus 188 G~~~W~~ 194 (668)
T 1kv9_A 188 GKLAWRF 194 (668)
T ss_dssp CCEEEEE
T ss_pred CcEEEEe
Confidence 64 875
No 133
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=78.23 E-value=26 Score=36.35 Aligned_cols=70 Identities=10% Similarity=0.112 Sum_probs=42.3
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccC-CCCCCcceEEeEECCEEEEEeC------CCceEEEeCCC
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRL-PVDFGVVSSGVVCNGIFYVYSE------TDKLAGYDIER 442 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~-p~~~~~~~~~v~~~g~lYViGG------~~~v~~YD~~~ 442 (464)
+.+++||+... -..+.++|..+. .|+.-..- +.......+.++.++.+|+... ...|.+||..+
T Consensus 113 ~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t 185 (571)
T 2ad6_A 113 YGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT 185 (571)
T ss_dssp EETTEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT
T ss_pred EECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC
Confidence 44567777543 135788888776 58754221 1111222223467999988654 35899999987
Q ss_pred C--cEEEc
Q 046692 443 G--FWIGI 448 (464)
Q Consensus 443 ~--~W~~l 448 (464)
+ .|+.-
T Consensus 186 G~~~W~~~ 193 (571)
T 2ad6_A 186 GELKWRAF 193 (571)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEc
Confidence 6 57643
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=78.13 E-value=37 Score=34.87 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=39.3
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCC-----cEEEeccCCCCCCcceE-EeEECC-EEEEEe--C-----CCceEEEeC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSN-----KWMEIQRLPVDFGVVSS-GVVCNG-IFYVYS--E-----TDKLAGYDI 440 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~-----~W~~v~~~p~~~~~~~~-~v~~~g-~lYViG--G-----~~~v~~YD~ 440 (464)
+.+|+.+..+. ++|-++|..+. .|+.+..++..-..... .+.-++ .||+-. + .+.|..||.
T Consensus 382 g~~~~s~~~~d-----~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 382 GPVWSTSHLGD-----GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp EEEEEEEBSSS-----SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred ccEEEeccCCC-----ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 67888775332 36788888762 38888777653222111 122244 566643 1 348999999
Q ss_pred CCCc
Q 046692 441 ERGF 444 (464)
Q Consensus 441 ~~~~ 444 (464)
.+.+
T Consensus 457 ~~~~ 460 (543)
T 1nir_A 457 KNLD 460 (543)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 8775
No 135
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.11 E-value=41 Score=30.97 Aligned_cols=68 Identities=6% Similarity=-0.051 Sum_probs=37.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCc--EEEeccCCCCCC-cceEEe-----EECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNK--WMEIQRLPVDFG-VVSSGV-----VCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~--W~~v~~~p~~~~-~~~~~v-----~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+.. ...+........ ...+.+ ..++.+++.|+. ..|..||+.+.+
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 455677776644 68899998764 333332221111 111111 136666666654 588999988876
Q ss_pred EEE
Q 046692 445 WIG 447 (464)
Q Consensus 445 W~~ 447 (464)
-..
T Consensus 202 ~~~ 204 (357)
T 3i2n_A 202 LRW 204 (357)
T ss_dssp EEE
T ss_pred eee
Confidence 433
No 136
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.06 E-value=52 Score=31.87 Aligned_cols=61 Identities=13% Similarity=0.104 Sum_probs=33.1
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-CceEEEeCCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~~ 443 (464)
+.+++.|+.++ .+.+||..+.. .+..+........++ ..-++.+.+.|+. ..|..||..+.
T Consensus 308 g~~l~sgs~D~------~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 308 GPFLLSGSRDK------TIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp CCEEEEEETTS------EEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred CCEEEEEeCCC------eEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 55677777644 68899987764 222222211222222 1225555555554 46888887654
No 137
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.06 E-value=30 Score=31.95 Aligned_cols=61 Identities=13% Similarity=0.033 Sum_probs=32.6
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE----CCEEEEEeC-CCceEEEeCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC----NGIFYVYSE-TDKLAGYDIER 442 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~----~g~lYViGG-~~~v~~YD~~~ 442 (464)
.++.+++.|+.++ .+.+||..+..=....... ... .+.... ++..+++|+ ...|..||+.+
T Consensus 178 ~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDNG------DIKLFDLRNMALRWETNIK--NGV-CSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETTS------EEEEEETTTTEEEEEEECS--SCE-EEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred CCCCEEEEEccCC------eEEEEECccCceeeecCCC--Cce-EEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 3566777776543 6889999887643322221 112 222222 455555554 44677787654
No 138
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=78.05 E-value=47 Score=31.37 Aligned_cols=63 Identities=6% Similarity=-0.036 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CCEEEEEeCCCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g~lYViGG~~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+..-.. .+............. ++.+++.+....|..||+.+.+
T Consensus 258 ~~~~l~~~~~d~------~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 258 TNKLLLSASDDG------TLRIWHGGNGNSQN--CFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp TTTEEEEEETTS------CEEEECSSSBSCSE--EECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEEcCCC------EEEEEECCCCccce--EecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCc
Confidence 455666666543 67889987654222 122111122222233 5533333344578899987765
No 139
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=77.98 E-value=15 Score=41.45 Aligned_cols=64 Identities=11% Similarity=0.177 Sum_probs=36.4
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceE-EeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~-~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
.++.+++.|+.++ .+.+||..+.+ .+..+........+ +..-++.+.+.|+. ..|..||..+++
T Consensus 1095 ~d~~~l~s~s~d~------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1095 SDATKFSSTSADK------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp SSSSSCEEECCSS------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred CCCCEEEEEcCCC------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 3456677776644 57788887654 23333322222222 22336767777654 468889988765
No 140
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=77.87 E-value=55 Score=32.01 Aligned_cols=25 Identities=16% Similarity=0.056 Sum_probs=17.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWM 404 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~ 404 (464)
++.+++.|+.++ .+.+||..+.+-.
T Consensus 251 d~~~l~s~~~d~------~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 251 KDYLLLSAGGDD------KIFAWDWKTGKNL 275 (450)
T ss_dssp STTEEEEEESSS------EEEEEETTTCCEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEe
Confidence 666777777543 7889999887643
No 141
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=77.73 E-value=44 Score=30.85 Aligned_cols=64 Identities=11% Similarity=0.039 Sum_probs=34.3
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
+.+++.|+.+ ..+..||+.+.+-...-. .....-.+++.. ++.+++.|+. + ..+.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~---------d-------g~i~ 141 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYV--GHGNAINELKFHPRDPNLLLSVSK---------D-------HALR 141 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEE--SCCSCEEEEEECSSCTTEEEEEET---------T-------SCEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeec--CCCCcEEEEEECCCCCCEEEEEeC---------C-------CeEE
Confidence 4566666632 358889988765332111 111111122222 5667777772 2 2488
Q ss_pred EEeCCCCCe
Q 046692 269 VFSPLTKSW 277 (464)
Q Consensus 269 vydp~t~~W 277 (464)
+||..+++-
T Consensus 142 iwd~~~~~~ 150 (366)
T 3k26_A 142 LWNIQTDTL 150 (366)
T ss_dssp EEETTTTEE
T ss_pred EEEeecCeE
Confidence 899887754
No 142
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=77.18 E-value=36 Score=36.27 Aligned_cols=130 Identities=10% Similarity=-0.061 Sum_probs=64.5
Q ss_pred ceEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCC
Q 046692 265 KGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (464)
Q Consensus 265 ~~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n 344 (464)
+.+.+|||.+++++.+..-.........+++.+. +|. |++ |... -+.+|||.++
T Consensus 493 ~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~-------------~g~--lWi-gt~~----------Gl~~~~~~~~ 546 (758)
T 3ott_A 493 KGIDKINPRTREVTKLFADELTGEKSPNYLLCDE-------------DGL--LWV-GFHG----------GVMRINPKDE 546 (758)
T ss_dssp SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECT-------------TSC--EEE-EETT----------EEEEECC--C
T ss_pred CCcEEEeCCCCceEEecCCCcCCCcccceEEECC-------------CCC--EEE-EecC----------ceEEEecCCC
Confidence 3588999999988876421111111122222221 133 453 3322 2567888777
Q ss_pred ccccc---CCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE
Q 046692 345 GFEGS---LLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV 421 (464)
Q Consensus 345 ~W~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~ 421 (464)
.++.- .++...- .+.+..++.|++... +-+.+|||.+.+..... ++... ...+...
T Consensus 547 ~~~~~~~~gl~~~~i-----------~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 605 (758)
T 3ott_A 547 SQQSISFGSFSNNEI-----------LSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN-MTNKR-FTSLLFD 605 (758)
T ss_dssp CCCBCCCCC---CCE-----------EEEEEETTEEEEEES--------SCEEEEETTTCCEEEC---CCCC-CSEEEEE
T ss_pred ceEEecccCCCccce-----------EEEEECCCCEEEECC--------CCeEEEcCCCceeEEec-CCCCc-eeeeEEE
Confidence 66541 1221111 112234677887543 24689999998876642 33321 1222212
Q ss_pred -ECCEEEEEeCCCceEEEeCCC
Q 046692 422 -CNGIFYVYSETDKLAGYDIER 442 (464)
Q Consensus 422 -~~g~lYViGG~~~v~~YD~~~ 442 (464)
-+|.|| +|+.+.+..|||+.
T Consensus 606 ~~~G~l~-fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 606 PKEDCVY-LGGADGFGISHSNL 626 (758)
T ss_dssp TTTTEEE-EECBSEEEEEEC--
T ss_pred CCCCcEE-EecCCceEEEChhh
Confidence 256666 46778899999974
No 143
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=76.89 E-value=17 Score=33.92 Aligned_cols=27 Identities=11% Similarity=0.298 Sum_probs=20.1
Q ss_pred CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeec
Q 046692 238 MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKV 280 (464)
Q Consensus 238 ~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l 280 (464)
++.||+++.. ...+++||+.+++.+.+
T Consensus 55 ~g~l~~~~~~----------------~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 55 QGQLFLLDVF----------------EGNIFKINPETKEIKRP 81 (333)
T ss_dssp TSCEEEEETT----------------TCEEEEECTTTCCEEEE
T ss_pred CCCEEEEECC----------------CCEEEEEeCCCCcEEEE
Confidence 6778888762 13589999999887664
No 144
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=76.42 E-value=47 Score=30.48 Aligned_cols=57 Identities=9% Similarity=0.022 Sum_probs=31.0
Q ss_pred ceEEeeCCCCc----eeeccccccCCCcceEEE-EECCE-EEEEcCCcCCccCccccCCCccccceEEEEeC-CCCCeee
Q 046692 207 EIHALDVSQDQ----WHRIDASILKGRFMFSVV-SIMDD-VYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSP-LTKSWRK 279 (464)
Q Consensus 207 ~v~~yD~~t~~----W~~l~~~~~~~R~~~s~~-~~~~~-IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp-~t~~W~~ 279 (464)
.+..||..+.. ...+.. ....-.+++ ..++. +++.|+. + ..+.+||. .+++...
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~---------d-------g~i~~wd~~~~~~~~~ 94 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLR---YKHPLLCCNFIDNTDLQIYVGTV---------Q-------GEILKVDLIGSPSFQA 94 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEE---CSSCEEEEEEEESSSEEEEEEET---------T-------SCEEEECSSSSSSEEE
T ss_pred eEEEEEeCCCCccccceeeee---cCCceEEEEECCCCCcEEEEEcC---------C-------CeEEEEEeccCCceEe
Confidence 57788877665 222211 111122233 23666 6667762 2 25889999 8877655
Q ss_pred cCC
Q 046692 280 VAS 282 (464)
Q Consensus 280 l~~ 282 (464)
+..
T Consensus 95 ~~~ 97 (342)
T 1yfq_A 95 LTN 97 (342)
T ss_dssp CBS
T ss_pred ccc
Confidence 543
No 145
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=76.35 E-value=78 Score=33.03 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=38.9
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFW 445 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W 445 (464)
.++.+++.|+.++ .+.+||..+.+ .+..+.......+.+..-++.+.+.+..+.|..||+.++.-
T Consensus 571 pdg~~l~sg~~Dg------~i~iwd~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 571 PDGSLCASGGKDG------VVLLWDLAEGK--KLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp TTSSEEEEEETTS------BCEEEETTTTE--EEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCc--eEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 3567778887654 67899998775 33333332222222222355566666666789999887653
No 146
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=75.86 E-value=43 Score=37.74 Aligned_cols=67 Identities=13% Similarity=0.070 Sum_probs=34.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCC------------CCCcceEEeEECCEEEEEeCCCceEEEeCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV------------DFGVVSSGVVCNGIFYVYSETDKLAGYDIE 441 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~------------~~~~~~~~v~~~g~lYViGG~~~v~~YD~~ 441 (464)
++.+++.|+.++ .+.+||..+..-........ .....+.+..-+|...++++.+.+..||..
T Consensus 754 ~~~~l~s~s~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~ 827 (1249)
T 3sfz_A 754 DDELLASCSADG------TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIH 827 (1249)
T ss_dssp STTEEEEEESSS------EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETT
T ss_pred CCCEEEEEECCC------eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEec
Confidence 455666776543 67888887664322211110 001111112235666666666778888877
Q ss_pred CCcEE
Q 046692 442 RGFWI 446 (464)
Q Consensus 442 ~~~W~ 446 (464)
+....
T Consensus 828 ~~~~~ 832 (1249)
T 3sfz_A 828 TSGLL 832 (1249)
T ss_dssp TCCEE
T ss_pred CCCce
Confidence 66543
No 147
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=75.85 E-value=52 Score=30.75 Aligned_cols=65 Identities=11% Similarity=0.024 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCC-CCcceEEeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD-FGVVSSGVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~-~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+++-...-..+.. ....+....-++.+.+.|+. ..|..||..+..
T Consensus 237 ~~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 237 NGNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 466777777654 688999987653222111111 11111122236667777654 468888876543
No 148
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=75.61 E-value=58 Score=31.19 Aligned_cols=60 Identities=17% Similarity=0.039 Sum_probs=31.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-------CCEEEEEeCCC-ceEEEeC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-------NGIFYVYSETD-KLAGYDI 440 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-------~g~lYViGG~~-~v~~YD~ 440 (464)
.++..++.|+.++ .+.+||..+..- +..+........+++.. ++.+++.|+.+ .|..+|.
T Consensus 320 ~~~~~l~sgs~D~------~v~iwd~~~~~~--~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 320 QNDEYILSGSKDR------GVLFWDKKSGNP--LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp GGGCEEEEEETTS------EEEEEETTTCCE--EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCeE--EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 3456667777644 688999887652 22222222222222222 36777777654 5655554
No 149
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.51 E-value=24 Score=33.54 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=29.6
Q ss_pred CceEEEeCCCCcEEEeccCCCCCCcceE-EeEECCEEEEEeCCCceEEEeCCC
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYSETDKLAGYDIER 442 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~~~~~~~-~v~~~g~lYViGG~~~v~~YD~~~ 442 (464)
..+.+||..+..-...-..+........ +..-++.+.+.|+...|..||+++
T Consensus 330 ~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 330 RTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp CCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred CeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 4789999988765332221111222222 223367777777666888999864
No 150
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=75.23 E-value=0.72 Score=47.94 Aligned_cols=36 Identities=25% Similarity=0.546 Sum_probs=28.7
Q ss_pred cCCCCChHHHHHHHHhhCC-cchhhhhhccccccccc
Q 046692 138 RMHIFLPDDILEMCLVRLP-LTSLMNARLVCKKWRYL 173 (464)
Q Consensus 138 rl~~~lp~dl~~~iL~rLp-~~sl~~~~~vck~W~~l 173 (464)
..+..+|+|++..||++|| ..++.+...+|++|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3456799999999999999 88999999999999876
No 151
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.17 E-value=48 Score=35.06 Aligned_cols=63 Identities=10% Similarity=-0.031 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.++++|+.++ .+.+||..+..- +..+.......... ..-++.+++.|+. ..|..||+.+.+
T Consensus 197 ~~~~l~~~~~dg------~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 197 DKPYMITASDDL------TIKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp TCCEEEEECTTS------EEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 566777777543 688999877653 22222221222222 2235555666554 578889987654
No 152
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=75.07 E-value=13 Score=33.93 Aligned_cols=78 Identities=13% Similarity=0.071 Sum_probs=45.4
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEE----ec-cCCCC-----CCcceEEeE--ECCEEEEEeCCCceEEEeC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWME----IQ-RLPVD-----FGVVSSGVV--CNGIFYVYSETDKLAGYDI 440 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~----v~-~~p~~-----~~~~~~~v~--~~g~lYViGG~~~v~~YD~ 440 (464)
.++++|.+-|. ..++||...++... |. .+|.. .....++.. .++++|++-| +..++||.
T Consensus 126 ~~gk~yfFkG~--------~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-~~ywr~d~ 196 (225)
T 3oyo_A 126 KGKEVYLFKGN--------KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-QNYVRIDF 196 (225)
T ss_dssp STTEEEEEETT--------EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-TEEEEEEC
T ss_pred CCCcEEEEeCC--------eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-CEEEEEeC
Confidence 46899999874 56888876665432 21 12221 112233334 3799999977 47899999
Q ss_pred CCC--cEEEcccCCCCccccccCC
Q 046692 441 ERG--FWIGIQTSPFPPRVIEYYP 462 (464)
Q Consensus 441 ~~~--~W~~l~~lp~pr~~~~~~~ 462 (464)
.++ .=+.+.. |+...+..|
T Consensus 197 ~~g~~~~~~~~g---Pk~i~~~w~ 217 (225)
T 3oyo_A 197 TPGGKADTLVGN---IRPILDGWP 217 (225)
T ss_dssp CTTCGGGCEECC---CEEHHHHSG
T ss_pred CcCCccceecCC---ceEhhHcCc
Confidence 833 2223333 455544444
No 153
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=74.31 E-value=48 Score=31.81 Aligned_cols=66 Identities=18% Similarity=0.147 Sum_probs=34.5
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.+++.|+.+ ..+..||..+.+-...-. .....-.+++.. ++...+.|+. + ..+.
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~---------d-------~~v~ 190 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSG---------D-------RTVR 190 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEET---------T-------SEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEc--cCCCCEEEEEEcCCCCEEEEecC---------C-------CcEE
Confidence 34556666532 357889988776433211 111111222222 4555566662 2 3578
Q ss_pred EEeCCCCCee
Q 046692 269 VFSPLTKSWR 278 (464)
Q Consensus 269 vydp~t~~W~ 278 (464)
+||..+++..
T Consensus 191 iwd~~~~~~~ 200 (393)
T 1erj_A 191 IWDLRTGQCS 200 (393)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCeeE
Confidence 8998887643
No 154
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=74.15 E-value=57 Score=30.37 Aligned_cols=65 Identities=17% Similarity=0.147 Sum_probs=38.1
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCc-ceEEeEECCEEEEEeCCC-ceEEEeCCCCcE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGV-VSSGVVCNGIFYVYSETD-KLAGYDIERGFW 445 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~-~~~~v~~~g~lYViGG~~-~v~~YD~~~~~W 445 (464)
.++++++.|+.++ .+.+||..+.+- +..+...... .+.+..-++.+++.|+.+ .|..||+.+...
T Consensus 174 pdg~~lasg~~dg------~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 174 PDGKYLASGAIDG------IINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp TTSSEEEEEETTS------CEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE
T ss_pred CCCCEEEEEcCCC------eEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce
Confidence 3567777777654 688999987753 3223221111 222222366777777654 688899876653
No 155
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=72.99 E-value=53 Score=29.50 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=32.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
++..++.|+.++ .+.+||..... ..+. .+......+....-++.+++.+....|..||+.+.+
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~~-~~~~-~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKVI-KTFS-GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEEE-EEEC-SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEECCC------CEEEEecCceE-EEEe-ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh
Confidence 445666666543 67889843221 1221 111112222233457774444445578899987654
No 156
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=72.85 E-value=71 Score=30.95 Aligned_cols=82 Identities=12% Similarity=-0.034 Sum_probs=47.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCc-EEEc-c
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGF-WIGI-Q 449 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~-W~~l-~ 449 (464)
.+++||+.-.. ...|+++|+....=+.+.... .....+.++.++.||+.. +.+.|.++|..+++ -..+ .
T Consensus 256 ~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~~--~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 256 AGRRMYWVDAK------HHVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp GGTEEEEEETT------TTEEEEECTTSCSCEEEECSS--CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCEEEEEECC------CCEEEEEeCCCCeeEEEEECC--CCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 46899998643 347899998754323332211 222233446899999986 45689999954432 2222 3
Q ss_pred cCCCCccccccCC
Q 046692 450 TSPFPPRVIEYYP 462 (464)
Q Consensus 450 ~lp~pr~~~~~~~ 462 (464)
.++.|..++-++|
T Consensus 328 ~~~~p~gi~v~~~ 340 (386)
T 3v65_B 328 KLHFPMDIHTLHP 340 (386)
T ss_dssp SCSCCCCEEEESG
T ss_pred CCCCCceEEEEch
Confidence 3455555554443
No 157
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=72.50 E-value=82 Score=31.61 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=33.2
Q ss_pred EEEeccccCCccccceEEeeCCCCceeeccccccCCC---cceEEEEE-C-CEEEEEcCCcCCccCccccCCCccccceE
Q 046692 193 LFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGR---FMFSVVSI-M-DDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 193 l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R---~~~s~~~~-~-~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
+++.|+.+ ..+..||..+.+-...-. .... .-.+++.. + +..++.|+. + ..+
T Consensus 175 ~l~~~~~d-----~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~---------d-------g~i 231 (615)
T 1pgu_A 175 RSMTVGDD-----GSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGS---------D-------RKI 231 (615)
T ss_dssp EEEEEETT-----TEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEET---------T-------CCE
T ss_pred EEEEEeCC-----CcEEEEeCCCcceeeeec--ccCCCCceEEEEEECCCCCCEEEEEeC---------C-------CeE
Confidence 55565532 357888877655432211 1111 11223322 4 667777762 2 358
Q ss_pred EEEeCCCCCee
Q 046692 268 LVFSPLTKSWR 278 (464)
Q Consensus 268 ~vydp~t~~W~ 278 (464)
.+||..+++..
T Consensus 232 ~vwd~~~~~~~ 242 (615)
T 1pgu_A 232 SCFDGKSGEFL 242 (615)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCCEe
Confidence 89998887643
No 158
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=72.10 E-value=22 Score=37.38 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=34.2
Q ss_pred ceEEEeCCCC--cEEEeccCC-CCCCcceEEeEECCEEEEEeC------CCceEEEeCCCCc--EEEc
Q 046692 392 SGEIYDSVSN--KWMEIQRLP-VDFGVVSSGVVCNGIFYVYSE------TDKLAGYDIERGF--WIGI 448 (464)
Q Consensus 392 ~vevYD~~t~--~W~~v~~~p-~~~~~~~~~v~~~g~lYViGG------~~~v~~YD~~~~~--W~~l 448 (464)
.+.++|..+. .|+.-..-+ .......+-++.+|++||-.+ ...|.+||..+++ |+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 5677887766 387532111 111222223467999887542 3589999998764 8754
No 159
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.53 E-value=66 Score=30.00 Aligned_cols=63 Identities=11% Similarity=0.107 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+..-.. .+........+. ..-++.+++.|+. ..|..||+.+++
T Consensus 195 ~~~~l~sg~~d~------~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 195 DTRLFVSGACDA------SAKLWDVREGMCRQ--TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCSEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEeCCC------cEEEEECCCCeeEE--EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 466778887654 68899998765322 222211222222 2225666666655 478889987764
No 160
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=71.05 E-value=69 Score=30.00 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=32.2
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcce-EEEE-ECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMF-SVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~-s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
+.+++.|+.+ ..+..||..+..+..+.. +....... +++. .++.+++.|+. + ..+.
T Consensus 73 g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~-~~~h~~~v~~v~~sp~~~~l~s~s~---------D-------~~v~ 130 (345)
T 3fm0_A 73 GNYLASASFD-----ATTCIWKKNQDDFECVTT-LEGHENEVKSVAWAPSGNLLATCSR---------D-------KSVW 130 (345)
T ss_dssp SSEEEEEETT-----SCEEEEEECCC-EEEEEE-ECCCSSCEEEEEECTTSSEEEEEET---------T-------SCEE
T ss_pred CCEEEEEECC-----CcEEEEEccCCCeEEEEE-ccCCCCCceEEEEeCCCCEEEEEEC---------C-------CeEE
Confidence 4455666533 246778877776654433 11111111 2222 25667777772 2 2477
Q ss_pred EEeCCCC
Q 046692 269 VFSPLTK 275 (464)
Q Consensus 269 vydp~t~ 275 (464)
+||..+.
T Consensus 131 iwd~~~~ 137 (345)
T 3fm0_A 131 VWEVDEE 137 (345)
T ss_dssp EEEECTT
T ss_pred EEECCCC
Confidence 8887664
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=70.54 E-value=69 Score=29.83 Aligned_cols=68 Identities=16% Similarity=0.252 Sum_probs=39.4
Q ss_pred cEEEEEcCCCCC-CCccCceEEEeCCCCcEEEe-ccCCCCCCcceEE-eEECCEEEEEe-CCCceEEEeCCC
Q 046692 375 FVLIAVGGLGSW-DEPLDSGEIYDSVSNKWMEI-QRLPVDFGVVSSG-VVCNGIFYVYS-ETDKLAGYDIER 442 (464)
Q Consensus 375 ~~iyviGG~~~~-~~~l~~vevYD~~t~~W~~v-~~~p~~~~~~~~~-v~~~g~lYViG-G~~~v~~YD~~~ 442 (464)
+.+|+..|.... +.....+.++|+.+.+.... ...+......... +.-+|.|||.. +.+.|..|+++.
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 677777765221 12234789999888875544 2112222222222 22367999986 456899998753
No 162
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=70.16 E-value=27 Score=32.05 Aligned_cols=23 Identities=4% Similarity=-0.071 Sum_probs=14.9
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSN 401 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~ 401 (464)
.++..++.|+.++ .|.+||..++
T Consensus 316 ~dg~~l~sgs~Dg------~v~iW~~~tG 338 (340)
T 4aow_A 316 ADGQTLFAGYTDN------LVRVWQVTIG 338 (340)
T ss_dssp TTSSEEEEEETTS------CEEEEEEEC-
T ss_pred CCCCEEEEEeCCC------EEEEEeCCCc
Confidence 3556677777654 5788887765
No 163
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=69.39 E-value=79 Score=30.02 Aligned_cols=62 Identities=3% Similarity=-0.074 Sum_probs=37.5
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCC-CcceEE-eEECCEEEEEeCC-CceEEEeCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDF-GVVSSG-VVCNGIFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~-~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~ 442 (464)
.++++++.|+.++ .|.+||..+.+ .+..+...+ ....++ ..-+|++.+.|+. +.|..+|+..
T Consensus 279 pdg~~lasgs~D~------~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 279 MKGELAVLASNDN------SIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEEETTS------CEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCceEEEcCCC------EEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 4678888888754 68999998764 333322221 222222 2237787777765 4788888643
No 164
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=69.35 E-value=76 Score=29.83 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=33.1
Q ss_pred EEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 377 LIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 377 iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
+++.|+.++ .+.+||..+.+- +..+.......... ..-++.++++|+. ..|..||..+..
T Consensus 302 ~l~~~~~d~------~i~i~d~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 302 KVISCSMDG------SVRLWSLKQNTL--LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEETTS------EEEEEETTTTEE--EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEEEeCCC------cEEEEECCCCcE--eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 666666543 688999977653 22222211222222 2225666666554 578899987654
No 165
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=69.05 E-value=84 Score=30.24 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=32.9
Q ss_pred cceEEeeCCCCceeeccccccCCCcce-EEEEE-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCe
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMF-SVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSW 277 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~-s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W 277 (464)
+.++.+|..+++...+-. ........ +++.. ++...++|+. + ..+.+||..+++-
T Consensus 125 ~tV~lWd~~tg~~~~~~~-~~~~~~~V~sv~fspdg~~lasgs~---------D-------g~v~iWd~~~~~~ 181 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTS---------S-------AEVQLWDVQQQKR 181 (420)
T ss_dssp TEEEEEETTTCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEET---------T-------SCEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEE-ecCCCCcEEEEEECCCCCEEEEEEC---------C-------CeEEEEEcCCCcE
Confidence 368999999988765433 12221112 22222 6677777772 2 2488899988753
No 166
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=68.28 E-value=1.2e+02 Score=31.81 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=41.7
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCc--eeeccccccC----C---CcceEEEEECCEEEEEcCCcCCccCccccC
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQ--WHRIDASILK----G---RFMFSVVSIMDDVYVVGGCSSLTSFGRVDR 258 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~--W~~l~~~~~~----~---R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~ 258 (464)
..++.||+... ...++++|..+.+ |+.-...... . ....+.++.++.||+... +
T Consensus 64 v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----------d- 126 (668)
T 1kv9_A 64 FHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL----------D- 126 (668)
T ss_dssp EETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT----------T-
T ss_pred EECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC----------C-
Confidence 34677777643 2468999988765 8763321110 0 012335567888887653 1
Q ss_pred CCccccceEEEEeCCCCC--eee
Q 046692 259 SSFKTHKGVLVFSPLTKS--WRK 279 (464)
Q Consensus 259 ~~~~~~~~v~vydp~t~~--W~~ 279 (464)
..++.+|..|++ |+.
T Consensus 127 ------g~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 127 ------GRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp ------SEEEEEETTTCCEEEEE
T ss_pred ------CEEEEEECCCCCEeeee
Confidence 248889998886 865
No 167
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=67.94 E-value=74 Score=29.18 Aligned_cols=26 Identities=4% Similarity=0.070 Sum_probs=17.0
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWME 405 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~ 405 (464)
++.+++.|+.++ .+.+||..+..-..
T Consensus 229 ~~~~l~~~~~d~------~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 229 DLTYFITSSRDT------NSFLVDVSTLQVLK 254 (369)
T ss_dssp TSSEEEEEETTS------EEEEEETTTCCEEE
T ss_pred CCCEEEEecCCc------eEEEEECCCCceee
Confidence 455666666543 68899998765433
No 168
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=67.25 E-value=85 Score=29.56 Aligned_cols=58 Identities=17% Similarity=0.085 Sum_probs=30.3
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCCC-ceEEE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSETD-KLAGY 438 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~~-~v~~Y 438 (464)
.++.+++.|+.++ .+.+||..+.. .+..+........+. ..-++.+++.|+.+ .|..|
T Consensus 294 ~~g~~l~~g~~d~------~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 294 LSGRLLFAGYNDY------TINVWDVLKGS--RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp TTSSEEEEEETTS------CEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCCCEEEEEECCC------cEEEEECCCCc--eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 3466777776543 68899987654 232232222222222 22366666666654 34443
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=67.21 E-value=55 Score=31.64 Aligned_cols=135 Identities=10% Similarity=-0.049 Sum_probs=62.4
Q ss_pred eEEEEeCCCCCeeecCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCc
Q 046692 266 GVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (464)
Q Consensus 266 ~v~vydp~t~~W~~l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~ 345 (464)
.|.+||..|++-..+-.+...........+..+ |+ +++.|+.++ .+..||..+..
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd--------------g~--~lasgs~Dg---------~v~iWd~~~~~ 180 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--------------GN--YLAVGTSSA---------EVQLWDVQQQK 180 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--------------SS--EEEEEETTS---------CEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCC--------------CC--EEEEEECCC---------eEEEEEcCCCc
Confidence 588899888876654433332222222223222 33 466676543 46677776554
Q ss_pred ccccCCCCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECC
Q 046692 346 FEGSLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNG 424 (464)
Q Consensus 346 W~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g 424 (464)
-... +. +|.. ...+...++.+++.|+.++ .+.++|......... .+.......... ...++
T Consensus 181 ~~~~-~~---~h~~-------~v~~~s~~~~~l~sgs~d~------~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 181 RLRN-MT---SHSA-------RVGSLSWNSYILSSGSRSG------HIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEEE-EC---CCSS-------CEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEE-EEECCSSCEEEEEECTTS
T ss_pred EEEE-Ee---CCCC-------ceEEEeeCCCEEEEEeCCC------ceeEeeecccceeeE-EecccccceeeeeecCCC
Confidence 2110 00 1100 0112234556777777643 567788766543221 222111112211 12244
Q ss_pred EEEEEeC-CCceEEEeCCCC
Q 046692 425 IFYVYSE-TDKLAGYDIERG 443 (464)
Q Consensus 425 ~lYViGG-~~~v~~YD~~~~ 443 (464)
...+.|+ .+.+..+|..++
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp SEEEEEETTSCEEEEESSCC
T ss_pred CeeeeeeccccceEEeeccc
Confidence 4444443 345666666543
No 170
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=66.64 E-value=82 Score=29.20 Aligned_cols=63 Identities=14% Similarity=0.097 Sum_probs=36.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+..-.. .+..........+. -++.+++.|+. ..|..||+.+.+
T Consensus 217 d~~~l~s~s~dg------~i~iwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 217 DSQLLVTASDDG------YIKIYDVQHANLAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TSCEEEEECTTS------CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEcCCC------eEEEEECCCcceeE--EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 567778887654 68899998765432 22222222222212 25666666654 478889987754
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=66.11 E-value=1.3e+02 Score=31.42 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=37.0
Q ss_pred ccceEEeeCCC------C--ceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCC-
Q 046692 205 SGEIHALDVSQ------D--QWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTK- 275 (464)
Q Consensus 205 ~~~v~~yD~~t------~--~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~- 275 (464)
.+.++.+|..+ . .+..+.. .... ....+..-++.||+.+.. + .....++++|..+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~s~dg~~l~~~s~~---------~----~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLID-NFEG-EYDYVTNEGTVFTFKTNR---------H----SPNYRLINIDFTDPE 322 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSS-CEEEEEEETTEEEEEECT---------T----CTTCEEEEEETTSCC
T ss_pred ccEEEEEECcccccccCCccceEEeeC-CCCc-EEEEEeccCCEEEEEECC---------C----CCCCEEEEEeCCCCC
Confidence 45789999876 4 5777754 1111 122333457788888662 1 12346899998775
Q ss_pred --CeeecC
Q 046692 276 --SWRKVA 281 (464)
Q Consensus 276 --~W~~l~ 281 (464)
.|+.+-
T Consensus 323 ~~~~~~l~ 330 (710)
T 2xdw_A 323 ESKWKVLV 330 (710)
T ss_dssp GGGCEEEE
T ss_pred cccceecc
Confidence 376653
No 172
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=65.91 E-value=80 Score=28.82 Aligned_cols=64 Identities=11% Similarity=-0.037 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEe-EECCEEEEEeCC-CceEEEeCCCCcE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSET-DKLAGYDIERGFW 445 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v-~~~g~lYViGG~-~~v~~YD~~~~~W 445 (464)
++.+++.|+.++ .+.+||..+.+ .+..+.........++ .-++.+++.|+. ..|..||..+.+-
T Consensus 197 ~~~~l~s~s~D~------~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 197 DKPYMITASDDL------TIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp TCCEEEEEETTS------EEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEcCCC------eEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 445667776544 68899998764 3333332222222222 224556666654 4788899877553
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=65.28 E-value=91 Score=29.21 Aligned_cols=63 Identities=10% Similarity=-0.084 Sum_probs=35.3
Q ss_pred cCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE-EEEEe---CCC--ceEEEeCCCCcEEEcccCC
Q 046692 390 LDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYS---ETD--KLAGYDIERGFWIGIQTSP 452 (464)
Q Consensus 390 l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~-lYViG---G~~--~v~~YD~~~~~W~~l~~lp 452 (464)
...++.+|+.....+.+..-............-+|+ |+..+ +.. .|+.||+.+++-+.+..++
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEEC
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCC
Confidence 457899999887766664422111111111122554 54433 222 3999999998876665544
No 174
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=65.08 E-value=92 Score=29.21 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=35.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEecc-CCCCCCcceEEeEECCEEEEEeCCCceEEEeC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR-LPVDFGVVSSGVVCNGIFYVYSETDKLAGYDI 440 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~-~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~ 440 (464)
++.+|++|+.+ .++.-.-.-.+|+.+.. .+.+.........-++.+|++|....|+.|+.
T Consensus 260 ~~~~~~~g~~g-------~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 260 PNEVWLAGGAG-------ALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SSCEEEEESTT-------CEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCEEEEEeCCC-------eEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 56889987632 23332223469999863 22222233322234678888876668888885
No 175
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=64.48 E-value=84 Score=28.55 Aligned_cols=62 Identities=16% Similarity=0.149 Sum_probs=33.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CCEEEEEeCCCceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g~lYViGG~~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+.. .+..+...... ...... ++.+.+.+....|..||..+..
T Consensus 226 ~~~~l~s~s~Dg------~i~iwd~~~~~--~~~~~~~~~~v-~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 226 DGSLCASGGKDG------QAMLWDLNEGK--HLYTLDGGDII-NALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp TSSEEEEEETTC------EEEEEETTTTE--EEEEEECSSCE-EEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred CCCEEEEEeCCC------eEEEEEeccCc--eeeeecCCceE-EeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 566777787654 67889987654 33333222111 122222 3444444444567778877654
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=64.21 E-value=87 Score=28.63 Aligned_cols=70 Identities=16% Similarity=0.036 Sum_probs=40.3
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEecc-CCC-CCCcceE-EeEECCEEEEEe--CC---------Cce
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQR-LPV-DFGVVSS-GVVCNGIFYVYS--ET---------DKL 435 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~-~p~-~~~~~~~-~v~~~g~lYViG--G~---------~~v 435 (464)
..++.+++++..+ ..+..+|+.+. .|+.-.. ++. ....... ....+|.+||.. |. ..+
T Consensus 173 ~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~ 246 (276)
T 3no2_A 173 LDNGDCLVACGDA------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQL 246 (276)
T ss_dssp CTTSCEEEECBTT------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSE
T ss_pred cCCCCEEEEeCCC------CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceE
Confidence 4567788876542 36899999965 4766432 222 1112222 334589999986 42 246
Q ss_pred EEEeCCCC-cEEE
Q 046692 436 AGYDIERG-FWIG 447 (464)
Q Consensus 436 ~~YD~~~~-~W~~ 447 (464)
..+|++-+ .|+.
T Consensus 247 ~~~~~~g~~~W~~ 259 (276)
T 3no2_A 247 VEIDSEGKVVWQL 259 (276)
T ss_dssp EEECTTSBEEEEE
T ss_pred EEECCCCCEEEEe
Confidence 66766443 4653
No 177
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=63.99 E-value=67 Score=31.20 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=32.2
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCc-EEEeccCCCCCCcceEEeEE-CC-EEEEEeCC-CceEEEeCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNK-WMEIQRLPVDFGVVSSGVVC-NG-IFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~-W~~v~~~p~~~~~~~~~v~~-~g-~lYViGG~-~~v~~YD~~~ 442 (464)
++.+++.|+.++ .+.+||..+.. ...+..+........+.+.. ++ .+++.|+. ..|..||..+
T Consensus 243 ~~~~l~s~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVADDQ------KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEETTS------EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 456777776543 68899998652 11111111111111222121 23 36777654 4688888765
No 178
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=63.71 E-value=1.1e+02 Score=29.71 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=28.9
Q ss_pred ceEEeeCCCCceeeccccccCCCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCC
Q 046692 207 EIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTK 275 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~ 275 (464)
.+.+||..++....+...........+++. .++.+++.|+. + ..+.+||..++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---------d-------g~i~~wd~~~~ 241 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---------V-------GNVILLNMDGK 241 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS---------S-------SBEEEEESSSC
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC---------C-------CcEeeeccCcc
Confidence 477888887765554331111111122332 36677777773 2 24788887654
No 179
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=63.26 E-value=45 Score=34.63 Aligned_cols=69 Identities=10% Similarity=0.071 Sum_probs=38.7
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCC-CCCcceEEeEECC------EEEEEeC------CCceE
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPV-DFGVVSSGVVCNG------IFYVYSE------TDKLA 436 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~-~~~~~~~~v~~~g------~lYViGG------~~~v~ 436 (464)
+.+++||+... -..+.++|..+. .|+.-..-+. ......+-++.++ .+|+-.. ...|.
T Consensus 115 ~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~ 187 (582)
T 1flg_A 115 IYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLF 187 (582)
T ss_dssp EETTEEEEEET-------TTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEE
T ss_pred EECCEEEEEeC-------CCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEE
Confidence 34567777432 135788888776 4876422111 1112222245667 7776431 35799
Q ss_pred EEeCCCC--cEEE
Q 046692 437 GYDIERG--FWIG 447 (464)
Q Consensus 437 ~YD~~~~--~W~~ 447 (464)
+||+.++ .|+.
T Consensus 188 alD~~tG~~~W~~ 200 (582)
T 1flg_A 188 ARDPDTGEEIWMR 200 (582)
T ss_dssp EECTTTCCEEEEE
T ss_pred EEECCCCCEEeec
Confidence 9999876 4864
No 180
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=62.56 E-value=81 Score=27.68 Aligned_cols=64 Identities=8% Similarity=0.002 Sum_probs=36.0
Q ss_pred ceEEeeCCC-CceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 207 EIHALDVSQ-DQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 207 ~v~~yD~~t-~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
.++.+|+.+ .+...+................++..+++++. +. .....++.+|..++..+.+..
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---------~~---~~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDK---------VE---FGKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEEC---------TT---TSSCEEEEEETTCCCCEECCS
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEe---------CC---CCcceEEEEECCCCceEEeec
Confidence 689999998 77776654111112122222335555555441 11 124568999998887666554
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.31 E-value=92 Score=29.11 Aligned_cols=64 Identities=9% Similarity=0.019 Sum_probs=33.9
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEEE-CCE-EEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDD-VYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~-IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
..++.+|+.+++...+.. ............ ++. |+.+.. .+ . ......++++|+.++.++.+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~-~~------~----~~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHE-GP------H----DLVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEEC-SC------S----SSCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEec-CC------C----CCCCceEEEEECCCCceeEeec
Confidence 468889998888776643 111112222222 233 444432 10 0 0122468999998887776654
No 182
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=62.27 E-value=98 Score=28.57 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=27.1
Q ss_pred ceEEEeCCCCcEEEeccCCCC--CCcceEEeEECCEEEEEeC-CCceEEEeCCCC
Q 046692 392 SGEIYDSVSNKWMEIQRLPVD--FGVVSSGVVCNGIFYVYSE-TDKLAGYDIERG 443 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~--~~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~ 443 (464)
.+.+||+....-..+. .|.. ......++.-++.|||.+. .+.|.+|++..+
T Consensus 261 ~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 261 KGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred EEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 4566777543333332 2221 1222233456899999863 468999998643
No 183
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=61.72 E-value=1.1e+02 Score=28.85 Aligned_cols=63 Identities=8% Similarity=0.057 Sum_probs=35.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECC-EEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNG-IFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g-~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+.+- +..+.........++. -++ .+++.++. ..|..||+.+..
T Consensus 274 ~~~~l~s~~~dg------~v~~wd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSGRDN------TVLLWNPESAEQ--LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEESSS------EEEEECSSSCCE--EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEeCCC------CEEEeeCCCCcc--ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 567777777643 688999887643 3222221111112222 244 56666654 468888876643
No 184
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=61.71 E-value=1.8 Score=44.98 Aligned_cols=33 Identities=24% Similarity=0.515 Sum_probs=30.2
Q ss_pred CCChHHHHHHHHhhC-Ccchhhhhhccccccccc
Q 046692 141 IFLPDDILEMCLVRL-PLTSLMNARLVCKKWRYL 173 (464)
Q Consensus 141 ~~lp~dl~~~iL~rL-p~~sl~~~~~vck~W~~l 173 (464)
..+|+|++..||++| +..++.+...+|++|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 469999999999999 899999999999999765
No 185
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=60.96 E-value=1.1e+02 Score=28.93 Aligned_cols=206 Identities=9% Similarity=-0.043 Sum_probs=103.1
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEE--ECCEEEEEcCCcCCccCccccCCCccccce
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVS--IMDDVYVVGGCSSLTSFGRVDRSSFKTHKG 266 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~--~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~ 266 (464)
.++.||+.-- ....++.+++.......+..... ..-.++++ .++.||+.-.. .+.
T Consensus 83 ~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~--~~p~glavd~~~g~ly~~d~~----------------~~~ 139 (349)
T 3v64_C 83 RRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGL--ESPGGLAVDWVHDKLYWTDSG----------------TSR 139 (349)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSC--SCCCEEEEETTTTEEEEEETT----------------TTE
T ss_pred cccEEEEEec-----cCCceEEEecCCCCceEEEeCCC--CCccEEEEecCCCeEEEEcCC----------------CCe
Confidence 4567777643 23468888888766554422111 11134444 47899998651 246
Q ss_pred EEEEeCCCCCeeecC--CCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCC
Q 046692 267 VLVFSPLTKSWRKVA--SMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (464)
Q Consensus 267 v~vydp~t~~W~~l~--~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n 344 (464)
++++++....-+.+. .+..|+ ++++-... + .||...-. ....++++++...
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~--------------g--~ly~td~~--------~~~~I~r~~~dG~ 192 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKPR---AIALHPME--------------G--TIYWTDWG--------NTPRIEASSMDGS 192 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCEE---EEEEETTT--------------T--EEEEEECS--------SSCEEEEEETTSC
T ss_pred EEEEcCCCCceEEEEeCCCCCcc---eEEEecCc--------------C--eEEEeccC--------CCCEEEEEeCCCC
Confidence 888888765433332 223232 22332111 2 25655321 1244566665432
Q ss_pred cccccCCCCCCccceecccccccccccc--cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE
Q 046692 345 GFEGSLLPNRKSYKFIRQKSDQSITKAS--KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC 422 (464)
Q Consensus 345 ~W~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~ 422 (464)
.-+.. ......+ ..+.++ .+++||+.-.. ...|+++|+....=+.+.... .....+.++.
T Consensus 193 ~~~~~-~~~~~~~---------PnGla~d~~~~~lY~aD~~------~~~I~~~~~dG~~~~~~~~~~--~~~P~giav~ 254 (349)
T 3v64_C 193 GRRII-ADTHLFW---------PNGLTIDYAGRRMYWVDAK------HHVIERANLDGSHRKAVISQG--LPHPFAITVF 254 (349)
T ss_dssp SCEES-CCSSCSC---------EEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSS--CSSEEEEEEE
T ss_pred CcEEE-EECCCCC---------cceEEEeCCCCEEEEEECC------CCEEEEEeCCCCceEEEEeCC--CCCceEEEEE
Confidence 21110 0000000 012222 47899998643 347899998754333332211 2223334468
Q ss_pred CCEEEEEe-CCCceEEEeCCCCcE-EEc-ccCCCCccccccCC
Q 046692 423 NGIFYVYS-ETDKLAGYDIERGFW-IGI-QTSPFPPRVIEYYP 462 (464)
Q Consensus 423 ~g~lYViG-G~~~v~~YD~~~~~W-~~l-~~lp~pr~~~~~~~ 462 (464)
++.||+.. +.+.|.++|..+++- ..+ ..+..|..+.-++|
T Consensus 255 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~ 297 (349)
T 3v64_C 255 EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHP 297 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECG
T ss_pred CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEcc
Confidence 99999986 467899999544432 222 23445555544443
No 186
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=59.73 E-value=90 Score=28.01 Aligned_cols=15 Identities=13% Similarity=0.220 Sum_probs=11.6
Q ss_pred eEEEEeCCCCCeeec
Q 046692 266 GVLVFSPLTKSWRKV 280 (464)
Q Consensus 266 ~v~vydp~t~~W~~l 280 (464)
.+.+||+.|++-.++
T Consensus 46 tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 46 SVYLWSASSGDILQL 60 (318)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 588999999876554
No 187
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=59.44 E-value=1.5e+02 Score=31.28 Aligned_cols=55 Identities=13% Similarity=-0.001 Sum_probs=33.7
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CCEEEEEeCCCceEEEeCCCCcEEEcc
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSETDKLAGYDIERGFWIGIQ 449 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g~lYViGG~~~v~~YD~~~~~W~~l~ 449 (464)
-+..||+.++++.....++.. ...+.+.- +|.|+|-. .+.+..||+.++.+..+.
T Consensus 212 Gl~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~~~~ 267 (758)
T 3ott_A 212 YLFQYFPSTGQIKQTEAFHNN--SIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQHII 267 (758)
T ss_dssp EEEEEETTTTEEEEEEEEEEE--EEEEEEECTTCCEEEEE-TTEEEEECCTTSCCEEEC
T ss_pred CCeEEcCCCCeEEeccCCCCC--eEEEEEEcCCCCEEEEe-CCceeEEecCCCcEEEEE
Confidence 467899999988776443321 11111122 56666654 457888998887776553
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=59.30 E-value=1.6e+02 Score=30.12 Aligned_cols=68 Identities=13% Similarity=0.035 Sum_probs=39.1
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeC-CC---ceEEEeCCCCcEEEcc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSE-TD---KLAGYDIERGFWIGIQ 449 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG-~~---~v~~YD~~~~~W~~l~ 449 (464)
+++++.+.. + ...++.+|..+...+.+.. ........ ..-++.++++.+ .+ .|+.+|+.+++.+.+.
T Consensus 305 ~~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 305 GLIAVVHGK-G----AAVLGILDPESGELVDAAG---PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp SCEEEEEBS-S----SCEEEEEETTTTEEEECCS---SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred CEEEEEEEc-C----ccEEEEEECCCCcEEEecC---CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 456665543 2 2356777888777666532 12222222 234666665543 32 6888899888887774
Q ss_pred c
Q 046692 450 T 450 (464)
Q Consensus 450 ~ 450 (464)
.
T Consensus 377 ~ 377 (662)
T 3azo_A 377 A 377 (662)
T ss_dssp S
T ss_pred c
Confidence 3
No 189
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=59.26 E-value=63 Score=29.66 Aligned_cols=50 Identities=10% Similarity=0.052 Sum_probs=28.2
Q ss_pred CceEEEeCCCCcEEEeccCCCCCCcceEEe-EECC-EEEEEeCC------CceEEEeCCCCc
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNG-IFYVYSET------DKLAGYDIERGF 444 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~~~~~~~~v-~~~g-~lYViGG~------~~v~~YD~~~~~ 444 (464)
..++.||+.+++++.+..+ ......+ .-++ .||+.... +.|..||+..+.
T Consensus 169 ~~v~~~d~~~g~~~~~~~~----~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMADL----DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEEECSSSCCCEEEEEE----SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CeEEEEcCCCCcEEEEecC----CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 3567788877777665411 1112211 2244 58877533 578888876543
No 190
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=59.25 E-value=1.2e+02 Score=28.43 Aligned_cols=65 Identities=9% Similarity=-0.025 Sum_probs=35.8
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEEE-CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
..++.+|+.+.+-..+.. ..........+. +++..++....+ . ......++++|+.+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~--~~~~~~~~~~sp~dg~~l~~~~~~~------~----~~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQ--ENQWLGHPIYRPYDDSTVAFCHEGP------H----DLVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSC------T----TTSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeec--CCccccccEECCCCCCEEEEEEecC------C----CCCcceEEEEeCCCCceEEeee
Confidence 568899999887766643 112222333333 444333322100 0 0124579999998887776654
No 191
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=59.06 E-value=1.3e+02 Score=29.05 Aligned_cols=189 Identities=9% Similarity=-0.108 Sum_probs=89.5
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCCCCC
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRY 285 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~m~~ 285 (464)
..++.+|.....-..+.. ..........+.+++..++++. +. ....++++|+.+++...+...+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~--~~~~v~~~~~Spdg~~la~~s~---------~~----~~~~i~~~d~~tg~~~~l~~~~~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHR--SPQPLMSPAWSPDGSKLAYVTF---------ES----GRSALVIQTLANGAVRQVASFPR 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEE--ESSCEEEEEECTTSSEEEEEEC---------TT----SSCEEEEEETTTCCEEEEECCSS
T ss_pred ceEEEEcCCCCCCEEEeC--CCCcceeeEEcCCCCEEEEEEe---------cC----CCcEEEEEECCCCcEEEeecCCC
Confidence 578899987665555433 1111111122235555555542 11 12479999999998776654332
Q ss_pred CccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccccCCCCCCccceeccccc
Q 046692 286 ARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSD 365 (464)
Q Consensus 286 ~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~~~l~~~~~~~~~~~~~~ 365 (464)
...++ .+..+ |+. |+..+..++ ...+..||..+..............
T Consensus 224 --~~~~~-~~spd--------------g~~-la~~~~~~g-------~~~i~~~d~~~~~~~~l~~~~~~~~-------- 270 (415)
T 2hqs_A 224 --HNGAP-AFSPD--------------GSK-LAFALSKTG-------SLNLYVMDLASGQIRQVTDGRSNNT-------- 270 (415)
T ss_dssp --CEEEE-EECTT--------------SSE-EEEEECTTS-------SCEEEEEETTTCCEEECCCCSSCEE--------
T ss_pred --cccCE-EEcCC--------------CCE-EEEEEecCC-------CceEEEEECCCCCEEeCcCCCCccc--------
Confidence 11122 22222 332 443433211 2346667776654332110000000
Q ss_pred ccccccccCcE-EEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeC----CCceEEEeC
Q 046692 366 QSITKASKRFV-LIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE----TDKLAGYDI 440 (464)
Q Consensus 366 ~~~~~~~~~~~-iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG----~~~v~~YD~ 440 (464)
...-.-+++ |+..+..++ ...++++|..+..-..+..-. .........-+|+..+++. ...|..+|+
T Consensus 271 --~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 271 --EPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp --EEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred --ceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 001112344 444443222 236888899887654442211 1111112223555444332 247999999
Q ss_pred CCCcEEEccc
Q 046692 441 ERGFWIGIQT 450 (464)
Q Consensus 441 ~~~~W~~l~~ 450 (464)
.+++...+..
T Consensus 343 ~~~~~~~l~~ 352 (415)
T 2hqs_A 343 ATGGVQVLSS 352 (415)
T ss_dssp TTCCEEECCC
T ss_pred CCCCEEEecC
Confidence 9988876654
No 192
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=58.15 E-value=1.1e+02 Score=28.01 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=34.4
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERG 443 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~ 443 (464)
.++++++.|+.++ .+.+||..+.+ .+..+.........+..-++.+.+.+..+.+..|+.+..
T Consensus 206 p~g~~l~s~~~dg------~i~iwd~~~~~--~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 206 PDGTLIASAGKDG------EIMLWNLAAKK--AMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp TTSSEEEEEETTC------EEEEEETTTTE--EEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCc--EEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 3567778887654 68899988764 222222211122222233555555555566777776543
No 193
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=57.47 E-value=1.2e+02 Score=27.91 Aligned_cols=52 Identities=6% Similarity=-0.077 Sum_probs=32.7
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCC
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERG 443 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~ 443 (464)
.+..||+.+.+.+.+..++........+...++.+|+.. +...|+++|+.++
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 367788888877777655432222222223466788876 4568999998764
No 194
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=56.59 E-value=1.3e+02 Score=28.06 Aligned_cols=50 Identities=12% Similarity=-0.018 Sum_probs=27.5
Q ss_pred ceEEEeCCCCcEEEeccCCCCCCcceEE-eEECCEEEEEeCC-CceEEEeCCCC
Q 046692 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-DKLAGYDIERG 443 (464)
Q Consensus 392 ~vevYD~~t~~W~~v~~~p~~~~~~~~~-v~~~g~lYViGG~-~~v~~YD~~~~ 443 (464)
.+.+||..+..- +..+.......... ..-++.+++.|+. ..|..||+.+.
T Consensus 315 ~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 315 TIAVYTVYSGEQ--ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEEETTTCCE--EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred EEEEEECcCCcc--eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 788999877653 33333222222222 2335566666554 47888888765
No 195
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=56.55 E-value=1.1e+02 Score=27.40 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=20.7
Q ss_pred CCEEEEEeCC-CceEEEeCCCC-cEEEcccCC
Q 046692 423 NGIFYVYSET-DKLAGYDIERG-FWIGIQTSP 452 (464)
Q Consensus 423 ~g~lYViGG~-~~v~~YD~~~~-~W~~l~~lp 452 (464)
++.+.+.|+. ..|..||+.++ .|..+..++
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEecCCCcEEEEecCcCcchhheeehc
Confidence 5666666654 47889998764 787776654
No 196
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=56.53 E-value=1.3e+02 Score=28.10 Aligned_cols=66 Identities=11% Similarity=-0.018 Sum_probs=33.0
Q ss_pred EEEeccccCCccccceEEeeCCCCceeecccccc-C---CCcceEEEE-ECCEEEEEcCCcCCccCccccCCCccccceE
Q 046692 193 LFLFGAVKDGYCSGEIHALDVSQDQWHRIDASIL-K---GRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGV 267 (464)
Q Consensus 193 l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~-~---~R~~~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v 267 (464)
+++.|+.+ ..+..||..+.+....-.... . ...-.+++. .++.++++|+. ++ ....+
T Consensus 199 ~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~---------d~----~~g~i 260 (397)
T 1sq9_A 199 LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD---------SN----SFGCI 260 (397)
T ss_dssp EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE---------ET----TEEEE
T ss_pred eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec---------CC----CCceE
Confidence 56665532 358899988765433211000 0 111112222 25666667662 10 11468
Q ss_pred EEEeCCCCC
Q 046692 268 LVFSPLTKS 276 (464)
Q Consensus 268 ~vydp~t~~ 276 (464)
.+||..+.+
T Consensus 261 ~i~d~~~~~ 269 (397)
T 1sq9_A 261 TLYETEFGE 269 (397)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 899988764
No 197
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=54.28 E-value=50 Score=30.34 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=43.4
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC-EEEEEeC-CCceEEEeCCCCcEEE
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSE-TDKLAGYDIERGFWIG 447 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g-~lYViGG-~~~v~~YD~~~~~W~~ 447 (464)
..++.+|+.++.+ ..+.++|+.+++....-.++........+..-+| .+|+.+. ...|..||+.+++-..
T Consensus 8 ~~~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 8 KAGHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CTTCEEEEEEETT------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4467888888753 3789999998865443333321122222223344 5787764 4689999998876543
No 198
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=53.16 E-value=1.5e+02 Score=28.51 Aligned_cols=24 Identities=4% Similarity=0.101 Sum_probs=15.3
Q ss_pred CCE-EEEEeC-CCceEEEeCCCCcEE
Q 046692 423 NGI-FYVYSE-TDKLAGYDIERGFWI 446 (464)
Q Consensus 423 ~g~-lYViGG-~~~v~~YD~~~~~W~ 446 (464)
++. +++.++ .+.|..|++.++.+.
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred CCCCEEEEEECCCCEEEeEccccccc
Confidence 444 555554 457888888776654
No 199
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=52.77 E-value=1.3e+02 Score=27.07 Aligned_cols=15 Identities=27% Similarity=0.147 Sum_probs=10.3
Q ss_pred CCceEEEeCCCCcEE
Q 046692 432 TDKLAGYDIERGFWI 446 (464)
Q Consensus 432 ~~~v~~YD~~~~~W~ 446 (464)
...|..||+.+.+..
T Consensus 114 ~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 114 PTRVALYDAETLSRR 128 (337)
T ss_dssp CCEEEEEETTTTEEE
T ss_pred CceEEEEECCCCcEE
Confidence 367888888776543
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=48.91 E-value=1.9e+02 Score=30.12 Aligned_cols=60 Identities=13% Similarity=0.295 Sum_probs=33.8
Q ss_pred ccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCC---eeec
Q 046692 205 SGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKS---WRKV 280 (464)
Q Consensus 205 ~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~---W~~l 280 (464)
...++.+|..+..|..+.. .. . .....+..++.+|+.... + .....++++|..+.. |+.+
T Consensus 251 ~~~l~~~~~~~~~~~~l~~-~~-~-~~~~~~~~~g~l~~~s~~---------~----~~~~~l~~~d~~~~~~~~~~~l 313 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVK-GV-G-AKYEVHAWKDRFYVLTDE---------G----APRQRVFEVDPAKPARASWKEI 313 (695)
T ss_dssp EEEEEEECTTCSSCEEEEE-CS-S-CCEEEEEETTEEEEEECT---------T----CTTCEEEEEBTTBCSGGGCEEE
T ss_pred ceEEEEEcCCCCceEEeec-CC-C-ceEEEEecCCcEEEEECC---------C----CCCCEEEEEeCCCCCccCCeEE
Confidence 3467777877777887754 11 1 122333345566665431 1 123468888887654 6654
No 201
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=48.91 E-value=1.8e+02 Score=27.46 Aligned_cols=66 Identities=11% Similarity=0.059 Sum_probs=37.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCC-----CC-cceEEeEECCEEEEEeCC-CceEEEeCCCCcE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD-----FG-VVSSGVVCNGIFYVYSET-DKLAGYDIERGFW 445 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~-----~~-~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~W 445 (464)
++..++.|+.++ .+.+||..+..-...-..... .. ..+.+...+|.+.+.|+. ..|..||..+.+-
T Consensus 260 ~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 260 DGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp TSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred CCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 456777777654 688999988753332111111 11 112222346776666654 4789999876653
No 202
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=48.89 E-value=2.1e+02 Score=28.40 Aligned_cols=61 Identities=18% Similarity=0.071 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCC-cceEEeEECCEEEEEeC-CCceEEEeCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG-VVSSGVVCNGIFYVYSE-TDKLAGYDIER 442 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~-~~~~~v~~~g~lYViGG-~~~v~~YD~~~ 442 (464)
++.+++.|+.++ .+.+||..+.. ..+..+..... ..+....-++. .+.++ ...|..||+++
T Consensus 552 ~~~~l~~~~~dg------~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 552 EEDLVATGSLDT------NIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCCEEEEEETTS------CEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCEEEEEcCCC------cEEEEECCCCc-eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 577888887654 68999998752 12222222222 22223345778 55554 45688888765
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=48.84 E-value=2e+02 Score=27.95 Aligned_cols=199 Identities=11% Similarity=0.046 Sum_probs=97.6
Q ss_pred CCCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 189 QNPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 189 ~~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
.++.||+... ..+.+..+|+.+++-..+......++ .++..-++.||+.... ....++
T Consensus 140 ~~g~lyv~d~-----~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~---------------~~~~I~ 197 (409)
T 3hrp_A 140 GNNTVLAYQR-----DDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWE---------------GTHTVY 197 (409)
T ss_dssp STTEEEEEET-----TTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSS---------------TTCEEE
T ss_pred CCCCEEEEec-----CCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecC---------------CCceEE
Confidence 3456777754 22468999999887766644221221 2222224567777541 012689
Q ss_pred EEeCCCCC-eeecCCCC--CCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCc
Q 046692 269 VFSPLTKS-WRKVASMR--YARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (464)
Q Consensus 269 vydp~t~~-W~~l~~m~--~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~ 345 (464)
++|+.++. ...+.... .......+++.... + .||+... ...+.+||+....
T Consensus 198 ~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~--------------g--~lyv~d~----------~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGSTFSGKIGAVALDETE--------------E--WLYFVDS----------NKNFGRFNVKTQE 251 (409)
T ss_dssp EEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS--------------S--EEEEECT----------TCEEEEEETTTCC
T ss_pred EEEcCCCceeEEeeeccchhcCCcEEEEEeCCC--------------C--eEEEEEC----------CCcEEEEECCCCC
Confidence 99987653 23331111 11112223332211 2 2676322 1256677776554
Q ss_pred cccc---CCCCCCccceecccccccccccc--cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCC-C--------
Q 046692 346 FEGS---LLPNRKSYKFIRQKSDQSITKAS--KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP-V-------- 411 (464)
Q Consensus 346 W~~~---~l~~~~~~~~~~~~~~~~~~~~~--~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p-~-------- 411 (464)
.... ......... + ....++ .++.||+.... ...|.+||+... ...+...+ .
T Consensus 252 ~~~~~~~~~~g~~~~~---P----~~~ia~~p~~g~lyv~d~~------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~ 317 (409)
T 3hrp_A 252 VTLIKQLELSGSLGTN---P----GPYLIYYFVDSNFYMSDQN------LSSVYKITPDGE-CEWFCGSATQKTVQDGLR 317 (409)
T ss_dssp EEEEEECCCCSCCCCS---S----CCEEEEETTTTEEEEEETT------TTEEEEECTTCC-EEEEEECTTCCSCBCEEG
T ss_pred EEEEecccccCCCCCC---c----cccEEEeCCCCEEEEEeCC------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcc
Confidence 3221 011000000 0 001222 25799998643 347889988765 33332211 0
Q ss_pred ---CCCcceEEeE-ECCEEEEEe--CCCceEEEeCCCCcEEEcc
Q 046692 412 ---DFGVVSSGVV-CNGIFYVYS--ETDKLAGYDIERGFWIGIQ 449 (464)
Q Consensus 412 ---~~~~~~~~v~-~~g~lYViG--G~~~v~~YD~~~~~W~~l~ 449 (464)
........++ -+|.|||.. +.+.|..||+.++.-..+.
T Consensus 318 ~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 318 EEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp GGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred cccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 0112222222 257899986 4568999997777665544
No 204
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=48.50 E-value=1.5e+02 Score=26.60 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=28.9
Q ss_pred CceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE-EEEEeCCCceEEEeCCCCcEE
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYSETDKLAGYDIERGFWI 446 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~-lYViGG~~~v~~YD~~~~~W~ 446 (464)
..+.+||+.+.+....-..+. .....+..-+++ ||+. ...|..||+.+++-.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGL--GRDLHVMDPEAGTLV 167 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEE--SSSEEEEETTTTEEE
T ss_pred ceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEe--CCeEEEEECCCCcEe
Confidence 467888887765433222221 112222223454 6666 357999999887644
No 205
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=48.35 E-value=1.3e+02 Score=30.09 Aligned_cols=133 Identities=11% Similarity=0.062 Sum_probs=0.0
Q ss_pred CCCeee--cCCCCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccccCC
Q 046692 274 TKSWRK--VASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLL 351 (464)
Q Consensus 274 t~~W~~--l~~m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~~~l 351 (464)
.+.|++ ++-.+..-..|+.+.+++.+ |++| ||+.....----+---.+.|.....
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~------------------fa~G-----yHnGDv~PRe~G~~yfs~~~~sp~~ 325 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNG------------------FAMG-----YHQGDVAPREVGLFYFPDAFNSPSN 325 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSC------------------EEEE-----EEECSSSSCEEEEEEETTTTTCTTC
T ss_pred cCCceecccccccceeeeeeeeEecCCc------------------eEEE-----eccCCCCcceeeEEEecccccCCcc
Q ss_pred CCCCccceecccccccccccccCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceE-EeEECCEEEEEe
Q 046692 352 PNRKSYKFIRQKSDQSITKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYS 430 (464)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~-~v~~~g~lYViG 430 (464)
-.++.-...-.....-.+.-.+++.||++--....+..-.++..-+..-..|+.+ .+|........ .+.+++.||++|
T Consensus 326 ~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~sl-rfp~nvHhtnlPFakvgD~l~mFg 404 (670)
T 3ju4_A 326 YVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESL-RFPHNVHHTTLPFAKVGDDLIMFG 404 (670)
T ss_dssp CEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEE-ECTTCCCSSCCCEEEETTEEEEEE
T ss_pred eeeeechhhhccccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhhe-eccccccccCCCcceeCCEEEEEe
No 206
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=48.28 E-value=1.8e+02 Score=27.39 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=37.0
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEE-eccCCCCC-C-cceEEeEECCEEEEEeCCC-ceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWME-IQRLPVDF-G-VVSSGVVCNGIFYVYSETD-KLAGYDIERG 443 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~-v~~~p~~~-~-~~~~~v~~~g~lYViGG~~-~v~~YD~~~~ 443 (464)
.++.+++.|+.++ .+.+||..+..-.. +..+.... . ..+.+..-+|.+++.|+.+ .|..||+...
T Consensus 308 ~~g~~l~~g~~dg------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 308 ISGRLLFAGYSNG------DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SSSSEEEEECTTS------CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCCEEEEEECCC------CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 3567777776644 68899987765432 22222211 1 2222223467777777654 6777877653
No 207
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=47.95 E-value=2.2e+02 Score=28.63 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=35.7
Q ss_pred eEEeeCCCCceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC
Q 046692 208 IHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS 282 (464)
Q Consensus 208 v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~ 282 (464)
+..||+.+.+..++.. .+. .....+.+++..++++. +.. ....++++|+.+++++.+..
T Consensus 134 ~~l~d~~~g~~~~l~~-~~~---~~~~~spDG~~la~~~~---------~~~---~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELAR-LPG---FGFVSDIRGDLIAGLGF---------FGG---GRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEE-ESS---CEEEEEEETTEEEEEEE---------EET---TEEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeec-CCC---ceEEECCCCCEEEEEEE---------cCC---CCeEEEEEcCCCCCceEeec
Confidence 3478988888777754 222 22333456665555541 111 12459999999999887754
No 208
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=47.79 E-value=2e+02 Score=29.32 Aligned_cols=71 Identities=17% Similarity=0.046 Sum_probs=39.3
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCC---c---ceEEeEE-CCEEEEEe--CCCceEEEeCCCCcE
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG---V---VSSGVVC-NGIFYVYS--ETDKLAGYDIERGFW 445 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~---~---~~~~v~~-~g~lYViG--G~~~v~~YD~~~~~W 445 (464)
++||+.+..++ ...++.+|+.+..|+.+........ + ....+.. ++.+++.+ |...|+.+|..++..
T Consensus 253 g~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 253 GSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL 328 (662)
T ss_dssp SCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE
T ss_pred CeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE
Confidence 45666555432 2367888887888887754322110 0 0111222 66776665 345677778877776
Q ss_pred EEcc
Q 046692 446 IGIQ 449 (464)
Q Consensus 446 ~~l~ 449 (464)
..+.
T Consensus 329 ~~l~ 332 (662)
T 3azo_A 329 VDAA 332 (662)
T ss_dssp EECC
T ss_pred EEec
Confidence 6654
No 209
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=47.35 E-value=1.4e+02 Score=25.98 Aligned_cols=149 Identities=9% Similarity=-0.050 Sum_probs=0.0
Q ss_pred EEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCC--CC---------eeecCCCCCCccccEEEEecCCCcc
Q 046692 233 SVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLT--KS---------WRKVASMRYARSMPILGISEVSPEF 301 (464)
Q Consensus 233 s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t--~~---------W~~l~~m~~~R~~~~~~~~~~~~~~ 301 (464)
+++.+++++|++=| +.+|+++... .. |..||. ...++......+
T Consensus 11 Ai~~~~g~~yfFkg------------------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~----~IDAa~~~~~~~--- 65 (195)
T 1itv_A 11 AIAEIGNQLYLFKD------------------GKYWRFSEGRGSRPQGPFLIADKWPALPR----KLDSVFEEPLSK--- 65 (195)
T ss_dssp EEEEETTEEEEEET------------------TEEEEECCSSSCCCEEEEEHHHHCTTSCS----SCSEEEECTTTC---
T ss_pred EEEEeCCEEEEEEC------------------CEEEEEECCccccCCCcEEhhhccCCCCC----CccEEEEECCCC---
Q ss_pred ccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccccCCCCCCccceecccccccccccccCcEEEEEc
Q 046692 302 SIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSITKASKRFVLIAVG 381 (464)
Q Consensus 302 ~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~iyviG 381 (464)
.+|.|-| +...+|+...-.- |-+.. .+++.......-++....++++|++-
T Consensus 66 --------------~~yfFkG-----------~~yw~~~~~~~~~---Pk~i~-~~G~p~~~~~iDAA~~~~~g~~yfFk 116 (195)
T 1itv_A 66 --------------KLFFFSG-----------RQVWVYTGASVLG---PRRLD-KLGLGADVAQVTGALRSGRGKMLLFS 116 (195)
T ss_dssp --------------CEEEEET-----------TEEEEEETTEEEE---EEEGG-GGTCCTTCCCCCEEEECSTTEEEEEE
T ss_pred --------------eEEEEeC-----------CEEEEEcCCccCC---CEEee-ecccCCCccceeEEEEcCCCeEEEEe
Q ss_pred CCCCCCCccCceEEEeCCCCc------EEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCc
Q 046692 382 GLGSWDEPLDSGEIYDSVSNK------WMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 382 G~~~~~~~l~~vevYD~~t~~------W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
|. ..+.||..+++ .......+.-.....++...+|.+|++-|. ..+.||..+.+
T Consensus 117 g~--------~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~-~y~~~~~~~~~ 176 (195)
T 1itv_A 117 GR--------RLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR-FYWRVSSRSEL 176 (195)
T ss_dssp TT--------EEEEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT-EEEEEECCTTC
T ss_pred CC--------EEEEEeCCcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC-EEEEEECCccE
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=47.33 E-value=6.9 Score=38.09 Aligned_cols=26 Identities=15% Similarity=0.362 Sum_probs=14.7
Q ss_pred ECCEEEEEeCCCceEEEeCCCCc--EEE
Q 046692 422 CNGIFYVYSETDKLAGYDIERGF--WIG 447 (464)
Q Consensus 422 ~~g~lYViGG~~~v~~YD~~~~~--W~~ 447 (464)
.++.+|+.+....|.+||+.+++ |+.
T Consensus 129 ~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 129 STSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp ----EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred cCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 35566655444578888887664 874
No 211
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=46.16 E-value=1.9e+02 Score=27.00 Aligned_cols=62 Identities=15% Similarity=0.105 Sum_probs=36.5
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCEEEEEeCC-CceEEEeCCCCc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
+.+++.|+.++ .+.+||..+.+.... +........+.+. -++.+++.|+. ..|..||+.++.
T Consensus 210 g~~l~sgs~Dg------~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 210 GNTFVSGGCDK------KAMVWDMRSGQCVQA--FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp CCEEEEEETTS------CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCC------eEEEEECCCCcEEEE--ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 46777777654 688999988765432 2221122222212 25666666654 478889987764
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=46.12 E-value=46 Score=30.23 Aligned_cols=74 Identities=16% Similarity=0.021 Sum_probs=43.2
Q ss_pred cCcEEEEEcCCCC-CCCccCceEEEeCCCCcEEEeccCCC---CCCcceEEeE-EC-CEEEEEeCCCceEEEeCCCCcEE
Q 046692 373 KRFVLIAVGGLGS-WDEPLDSGEIYDSVSNKWMEIQRLPV---DFGVVSSGVV-CN-GIFYVYSETDKLAGYDIERGFWI 446 (464)
Q Consensus 373 ~~~~iyviGG~~~-~~~~l~~vevYD~~t~~W~~v~~~p~---~~~~~~~~v~-~~-g~lYViGG~~~v~~YD~~~~~W~ 446 (464)
.++.||+...... .......+.+||+.+++++.+.. +. ........+. -+ |.|||.+..+.|..||++ ++..
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFE 104 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEE
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEE
Confidence 3567888711000 00112368899998998876642 10 0011122222 35 889998766689999998 7776
Q ss_pred Ec
Q 046692 447 GI 448 (464)
Q Consensus 447 ~l 448 (464)
.+
T Consensus 105 ~~ 106 (314)
T 1pjx_A 105 EI 106 (314)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 213
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=45.18 E-value=59 Score=33.63 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=47.7
Q ss_pred ccccCcEEEEEcCCCCCCCccCceEEEeC-CCC--cEEEeccCCCC-C------CcceEEeEECCEEEEEeCCCceEEEe
Q 046692 370 KASKRFVLIAVGGLGSWDEPLDSGEIYDS-VSN--KWMEIQRLPVD-F------GVVSSGVVCNGIFYVYSETDKLAGYD 439 (464)
Q Consensus 370 ~~~~~~~iyviGG~~~~~~~l~~vevYD~-~t~--~W~~v~~~p~~-~------~~~~~~v~~~g~lYViGG~~~v~~YD 439 (464)
.++.++.||+.... ...++++|. .+. .|+.-...+.. . ......++.++++|+......+.++|
T Consensus 58 P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD 131 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALD 131 (571)
T ss_dssp CEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEE
T ss_pred cEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEE
Confidence 45678999998652 136899998 665 59875332211 0 01112346799999987767899999
Q ss_pred CCCC--cEEE
Q 046692 440 IERG--FWIG 447 (464)
Q Consensus 440 ~~~~--~W~~ 447 (464)
..++ .|+.
T Consensus 132 ~~tG~~~W~~ 141 (571)
T 2ad6_A 132 AKTGKINWEV 141 (571)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCCEEEEe
Confidence 9877 5874
No 214
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=44.78 E-value=1.1e+02 Score=30.28 Aligned_cols=60 Identities=12% Similarity=-0.057 Sum_probs=32.4
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-ECCE-EEEEe-CCCceEEEeCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI-FYVYS-ETDKLAGYDIE 441 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-~~g~-lYViG-G~~~v~~YD~~ 441 (464)
+.||+..-. ...+++||+.+..-..+..++.. ......++ -+|. |||.. +.+.|.+||.+
T Consensus 238 g~lyv~d~~------~~~V~~~~~~~~~~~~~~~~~~~-~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 238 GELYFNSWN------AGQVFRYDFTTQETTPLFTIQDS-GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEEEETT------TTEEEEEETTTTEEEEEEECSSS-SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEECC------CCEEEEEECCCCcEEEEEEcCCC-CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 467776432 23678888877654344333321 11222222 2454 99886 45678886654
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.69 E-value=1.9e+02 Score=26.68 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=41.4
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcceEEE-EECCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVV-SIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~-~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
++.+|+++.. ...++.||+.+++...+.. +. .-.+++ .-++.+||... ..++
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~--~~--~v~~i~~~~dg~l~v~~~------------------~gl~ 112 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL--PF--MGSALAKISDSKQLIASD------------------DGLF 112 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC--SS--CEEEEEEEETTEEEEEET------------------TEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC--CC--cceEEEEeCCCeEEEEEC------------------CCEE
Confidence 4667777542 2468999999887665432 11 112222 34778777532 1389
Q ss_pred EEeCCCCCeeecCC
Q 046692 269 VFSPLTKSWRKVAS 282 (464)
Q Consensus 269 vydp~t~~W~~l~~ 282 (464)
+||+.+++.+.+..
T Consensus 113 ~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 113 LRDTATGVLTLHAE 126 (326)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCcEEEEee
Confidence 99999998876654
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=44.39 E-value=3e+02 Score=28.73 Aligned_cols=60 Identities=13% Similarity=0.218 Sum_probs=36.6
Q ss_pred cceEEeeCCCC--ceeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCC---Ceeec
Q 046692 206 GEIHALDVSQD--QWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTK---SWRKV 280 (464)
Q Consensus 206 ~~v~~yD~~t~--~W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~---~W~~l 280 (464)
+.++.+|..+. .|..+.. . .......+...++.||+.... + .....++++|..+. .|+.+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~-~-~~~~~~~~~~~g~~l~~~t~~---------~----~~~~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG-D-LDADVSLVDNKGSTLYLLTNR---------D----APNRRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC-S-SSSCEEEEEEETTEEEEEECT---------T----CTTCEEEEEETTSCCGGGCEEE
T ss_pred cEEEEEECCCCCCceEEEeC-C-CCceEEEEeccCCEEEEEECC---------C----CCCCEEEEEeCCCCCccccEEE
Confidence 57899998765 6777754 1 111122244568889888762 1 12346888888764 36654
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=44.25 E-value=46 Score=35.23 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=48.3
Q ss_pred ccccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCC-------CcceEEeEECCEEEEEeCCCceEEEeC
Q 046692 370 KASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDF-------GVVSSGVVCNGIFYVYSETDKLAGYDI 440 (464)
Q Consensus 370 ~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~-------~~~~~~v~~~g~lYViGG~~~v~~YD~ 440 (464)
.++.++.||+... ...++++|..+. .|+.-...+... ......++.+++||+......|.++|.
T Consensus 73 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~ 145 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDA 145 (677)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEET
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEEC
Confidence 4567899999765 246889998876 488754332110 011123467999999876778999999
Q ss_pred CCC--cEEEc
Q 046692 441 ERG--FWIGI 448 (464)
Q Consensus 441 ~~~--~W~~l 448 (464)
.++ .|+.-
T Consensus 146 ~tG~~~W~~~ 155 (677)
T 1kb0_A 146 ATGKEVWHQN 155 (677)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEeeec
Confidence 776 48753
No 218
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.07 E-value=73 Score=33.05 Aligned_cols=72 Identities=14% Similarity=0.211 Sum_probs=48.5
Q ss_pred cccccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCCC-----cceEEeEECCEEEEEeCCCceEEEeCC
Q 046692 369 TKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFG-----VVSSGVVCNGIFYVYSETDKLAGYDIE 441 (464)
Q Consensus 369 ~~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~~-----~~~~~v~~~g~lYViGG~~~v~~YD~~ 441 (464)
+.++.+++||+.... ..+.++|..+. .|+.-...+.... .....++.++++|+......|.++|.+
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~ 135 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKN 135 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESS
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECC
Confidence 345778999998653 23889998776 4987544332110 011224679999998766789999998
Q ss_pred CC--cEEE
Q 046692 442 RG--FWIG 447 (464)
Q Consensus 442 ~~--~W~~ 447 (464)
++ .|+.
T Consensus 136 TG~~~W~~ 143 (582)
T 1flg_A 136 TGKVVWKK 143 (582)
T ss_dssp SCCEEEEE
T ss_pred CCCEEeee
Confidence 77 4875
No 219
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=43.79 E-value=2e+02 Score=26.71 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=38.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEE-eCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCC-CCcEEEccc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIY-DSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIE-RGFWIGIQT 450 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevY-D~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~-~~~W~~l~~ 450 (464)
++.+|++|..+ .++.- |..-.+|+.+.. +........+..-++.+|+.+....++..+.+ -..|+.+..
T Consensus 173 ~~~~~~~g~~G-------~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 173 SGEYVAVSSRG-------SFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp TSCEEEEETTS-------SEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBC
T ss_pred CCcEEEEECCC-------cEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccC
Confidence 46677766322 23333 333578999843 33333333332346788888755556655433 568987654
No 220
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=43.42 E-value=2.3e+02 Score=27.19 Aligned_cols=171 Identities=8% Similarity=-0.123 Sum_probs=88.5
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEEE--CCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC-
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS- 282 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~- 282 (464)
+.+..+|+.......+... .....+++.. ++.||++.- ....++++++.....+.+..
T Consensus 96 ~~I~~i~~~~~~~~~~~~~---~~~~~gl~~d~~~~~ly~~D~----------------~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN---LENAIALDFHHRRELVFWSDV----------------TLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp SCEEEECTTSCCCEEEECS---CSCEEEEEEETTTTEEEEEET----------------TTTEEEEEETTSCCEEEEECS
T ss_pred ccceeeccCCCcEEEEecC---CCccEEEEEecCCCeEEEEeC----------------CCCcEEEEecCCCCcEEEEeC
Confidence 3678888887776655431 1222344443 688999854 12458999998876655422
Q ss_pred -CCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc---cCCCCCCccc
Q 046692 283 -MRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG---SLLPNRKSYK 358 (464)
Q Consensus 283 -m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~---~~l~~~~~~~ 358 (464)
+..| .++++-... + .||+.-.. ...++++++....-+. ..+..+
T Consensus 157 ~~~~p---~glavd~~~--------------g--~lY~~d~~---------~~~I~~~~~dg~~~~~l~~~~l~~P---- 204 (386)
T 3v65_B 157 GLESP---GGLAVDWVH--------------D--KLYWTDSG---------TSRIEVANLDGAHRKVLLWQSLEKP---- 204 (386)
T ss_dssp SCSCC---CCEEEETTT--------------T--EEEEEETT---------TTEEEECBTTSCSCEEEECSSCSCE----
T ss_pred CCCCc---cEEEEEeCC--------------C--eEEEEcCC---------CCeEEEEeCCCCceEEeecCCCCCC----
Confidence 2222 223332111 2 25665422 1234455543322111 011111
Q ss_pred eecccccccccccc--cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE--ECCEEEEEe-CCC
Q 046692 359 FIRQKSDQSITKAS--KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYS-ETD 433 (464)
Q Consensus 359 ~~~~~~~~~~~~~~--~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~--~~g~lYViG-G~~ 433 (464)
.+.++ .++.||+..-.. ...|+++++....=+.+..- ........++ .++.||+.- +.+
T Consensus 205 ---------~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~--~~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 205 ---------RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp ---------EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECS--SCSCEEEEEEEGGGTEEEEEETTTT
T ss_pred ---------cEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEEC--CCCCeeeEEEeCCCCEEEEEECCCC
Confidence 11122 367899875321 24789999876543444221 1222222323 378999986 456
Q ss_pred ceEEEeCCCC
Q 046692 434 KLAGYDIERG 443 (464)
Q Consensus 434 ~v~~YD~~~~ 443 (464)
.|+++|++..
T Consensus 269 ~I~~~d~dG~ 278 (386)
T 3v65_B 269 VIERANLDGS 278 (386)
T ss_dssp EEEEECTTSC
T ss_pred EEEEEeCCCC
Confidence 8999998743
No 221
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=42.97 E-value=3e+02 Score=28.43 Aligned_cols=59 Identities=14% Similarity=-0.116 Sum_probs=32.5
Q ss_pred cCceEEEeCCCCcEEEeccCCCCC---CcceEEeEECCEEEEEeC---CCceEEEeCCCCcEEEcc
Q 046692 390 LDSGEIYDSVSNKWMEIQRLPVDF---GVVSSGVVCNGIFYVYSE---TDKLAGYDIERGFWIGIQ 449 (464)
Q Consensus 390 l~~vevYD~~t~~W~~v~~~p~~~---~~~~~~v~~~g~lYViGG---~~~v~~YD~~~~~W~~l~ 449 (464)
...++++|+.+.+...+..-.... .....+..-+|++++.+. ...|+.+|.... ...+.
T Consensus 311 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 311 KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 357889999998877664322110 011112233666666653 346777776655 55544
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=42.77 E-value=3.2e+02 Score=28.67 Aligned_cols=70 Identities=19% Similarity=0.154 Sum_probs=42.0
Q ss_pred CCCCeEEEeccccCCccccceEEeeCCCCc--eeeccccccC----C---CcceEEEEECCEEEEEcCCcCCccCccccC
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDVSQDQ--WHRIDASILK----G---RFMFSVVSIMDDVYVVGGCSSLTSFGRVDR 258 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~~t~~--W~~l~~~~~~----~---R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~ 258 (464)
..++.||+... ...++++|..+.+ |+.-...... . ....+.++.++.||+... +
T Consensus 68 v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~----------d- 130 (689)
T 1yiq_A 68 VVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL----------D- 130 (689)
T ss_dssp EETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT----------T-
T ss_pred EECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc----------C-
Confidence 34677777654 2468999998765 8753321100 0 112235667888888653 1
Q ss_pred CCccccceEEEEeCCCCC--eeec
Q 046692 259 SSFKTHKGVLVFSPLTKS--WRKV 280 (464)
Q Consensus 259 ~~~~~~~~v~vydp~t~~--W~~l 280 (464)
..++.+|..|++ |+.-
T Consensus 131 ------g~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 131 ------GRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp ------SEEEEEETTTCCEEEEEE
T ss_pred ------CEEEEEECCCCCEeeeec
Confidence 247888888876 7653
No 223
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=42.29 E-value=2e+02 Score=26.10 Aligned_cols=67 Identities=10% Similarity=0.044 Sum_probs=33.8
Q ss_pred CeEEEeccccCCccccceEEeeCCCCceeeccccccCCCcce-EEEEE-CCEEEEEcCCcCCccCccccCCCccccceEE
Q 046692 191 PWLFLFGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMF-SVVSI-MDDVYVVGGCSSLTSFGRVDRSSFKTHKGVL 268 (464)
Q Consensus 191 ~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~l~~~~~~~R~~~-s~~~~-~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~ 268 (464)
+.+++.|+.+ ..+..||..+........ ........ +++.. ++..++.|+. + ..+.
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~---------d-------g~v~ 111 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASC---------D-------KTAK 111 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEET---------T-------SEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEE-eccccCCEEEEEECcCCCEEEEEcC---------C-------CcEE
Confidence 3566666633 357888887633322111 11111111 22222 5666666662 2 3588
Q ss_pred EEeCCCCCeee
Q 046692 269 VFSPLTKSWRK 279 (464)
Q Consensus 269 vydp~t~~W~~ 279 (464)
+||..+++...
T Consensus 112 iwd~~~~~~~~ 122 (368)
T 3mmy_A 112 MWDLSSNQAIQ 122 (368)
T ss_dssp EEETTTTEEEE
T ss_pred EEEcCCCCcee
Confidence 89988776443
No 224
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=41.64 E-value=3.3e+02 Score=28.52 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=37.4
Q ss_pred ccceEEeeCCCC--c-eeeccccccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCC--CCeee
Q 046692 205 SGEIHALDVSQD--Q-WHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLT--KSWRK 279 (464)
Q Consensus 205 ~~~v~~yD~~t~--~-W~~l~~~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t--~~W~~ 279 (464)
.+.++.+|..+. + |..+.. ..... ...+..-++.||+.... + .....++++|..+ ..|+.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~-~~~~~-~~~~~~dg~~l~~~s~~---------~----~~~~~l~~~d~~~~~~~~~~ 357 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIP-DLKAQ-WDFVDGVGDQLWFVSGD---------G----APLKKIVRVDLSGSTPRFDT 357 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEEC-SSSSC-EEEEEEETTEEEEEECT---------T----CTTCEEEEEECSSSSCEEEE
T ss_pred cceEEEEECCCCCCcccEEecC-CCCce-EEEEeccCCEEEEEECC---------C----CCCCEEEEEeCCCCccccEE
Confidence 457899998877 6 887754 22121 12233457777777541 1 1234689999887 46776
Q ss_pred cC
Q 046692 280 VA 281 (464)
Q Consensus 280 l~ 281 (464)
+-
T Consensus 358 l~ 359 (741)
T 1yr2_A 358 VV 359 (741)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 225
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.56 E-value=2.6e+02 Score=29.58 Aligned_cols=69 Identities=7% Similarity=-0.074 Sum_probs=37.1
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE--ECCEEEEEe-CCCceEEEeCCCCcEEEc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYS-ETDKLAGYDIERGFWIGI 448 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~--~~g~lYViG-G~~~v~~YD~~~~~W~~l 448 (464)
.++.||+..-. ....|+++++....-+.+..- ........++ .++.|||.- +.+.|++||+....-+.+
T Consensus 506 ~~g~ly~td~~-----~~~~I~~~~~dG~~~~~l~~~--~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 506 VHGFMYWTDWG-----TPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp SSSCCEECCCS-----SSCCEEBCCSSSCCCCEESCS--SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE
T ss_pred CCCcEEEcccC-----CCCeEEEEeCCCCCeeEEEeC--CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE
Confidence 35678876421 124678887765433333211 1112222222 258899986 456899999875433333
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=41.54 E-value=81 Score=28.81 Aligned_cols=68 Identities=13% Similarity=0.067 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcEEEcccC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFWIGIQTS 451 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~l~~l 451 (464)
++.||+++-.. ..+.+||+.++.-..+. ++. ...+.+..-+|.||+.. .+.|..||+++++++.+...
T Consensus 24 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~--~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 24 SNSLLFVDIPA------KKVCRWDSFTKQVQRVT-MDA--PVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp TTEEEEEETTT------TEEEEEETTTCCEEEEE-CSS--CEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEe-CCC--ceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEec
Confidence 36888887543 37899999988765442 222 11121222367766654 56899999999988877654
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=41.49 E-value=1.1e+02 Score=28.36 Aligned_cols=67 Identities=13% Similarity=-0.091 Sum_probs=44.2
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCcEEEcccC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGFWIGIQTS 451 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~W~~l~~l 451 (464)
+.+|+++..+ ..+.+||+.++..+.+. ++. ...+.+..-+|.+++.. .+.|..||+.+++...+...
T Consensus 61 ~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp TEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECS
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeC
Confidence 5788886432 36899999988765543 332 22222234578888765 45699999999888776543
No 228
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=41.12 E-value=2.4e+02 Score=26.81 Aligned_cols=183 Identities=10% Similarity=0.022 Sum_probs=0.0
Q ss_pred eEEeeCCC--CceeeccccccCCCcceEEEEE---CCEEEEEcCCcCCccCccccCCCccccc----eEEEEeCCCCCee
Q 046692 208 IHALDVSQ--DQWHRIDASILKGRFMFSVVSI---MDDVYVVGGCSSLTSFGRVDRSSFKTHK----GVLVFSPLTKSWR 278 (464)
Q Consensus 208 v~~yD~~t--~~W~~l~~~~~~~R~~~s~~~~---~~~IYVvGG~~gl~~~~~~~~~~~~~~~----~v~vydp~t~~W~ 278 (464)
++.++... .+|..+.. .+....-++++.- .+.||+.+. .. .+++.+....+|+
T Consensus 33 l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~-----------------~g~~g~gl~~s~D~G~tW~ 94 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAAR-----------------TGHLGPTVFRSDDGGGNWT 94 (394)
T ss_dssp EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEE-----------------C--CCEEEEEESSTTSCCE
T ss_pred eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEec-----------------CCCCCccEEEeCCCCCCce
Q ss_pred ecCCCC------------CCccccEEEEe----cCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecC
Q 046692 279 KVASMR------------YARSMPILGIS----EVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNS 342 (464)
Q Consensus 279 ~l~~m~------------~~R~~~~~~~~----~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~ 342 (464)
.+.... ....-.++++. ... ||+.+...+ +.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~------------------l~~g~~~gg----------l~~S~Dg 146 (394)
T 3b7f_A 95 EATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT------------------WYAGTSPQG----------LFRSTDH 146 (394)
T ss_dssp ECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC------------------EEEEEETTE----------EEEESST
T ss_pred ECCccccCCCcccccccccccceeEEEeCCCCCCCE------------------EEEEecCCc----------EEEEcCC
Q ss_pred CCcccccCCC----------------CCCccceeccccccccccccc---CcEEEEEcCCCCCCCccCceEEEeCCCCcE
Q 046692 343 FDGFEGSLLP----------------NRKSYKFIRQKSDQSITKASK---RFVLIAVGGLGSWDEPLDSGEIYDSVSNKW 403 (464)
Q Consensus 343 ~n~W~~~~l~----------------~~~~~~~~~~~~~~~~~~~~~---~~~iyviGG~~~~~~~l~~vevYD~~t~~W 403 (464)
..+|+..... ......+ ...++. .+.||+... ...++..+....+|
T Consensus 147 G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i--------~~i~~d~~~~~~l~vg~~-------~ggl~~s~DgG~tW 211 (394)
T 3b7f_A 147 GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM--------HSILVDPRDPKHLYIGMS-------SGGVFESTDAGTDW 211 (394)
T ss_dssp TSBCEECHHHHTCTTHHHHHCCC----CCCCEE--------EEEEECTTCTTCEEEEEE-------TBEEEEESSTTSSC
T ss_pred CCCeEECcCccCCccccccccccccCCCCCCce--------eEEEECCCCCCEEEEEEC-------CCCEEEECCCCCCc
Q ss_pred EEeccCCCC-----------CCcceEEeEEC--CEEEEEeCCCceEEEeCCCCcEEEccc-CC
Q 046692 404 MEIQRLPVD-----------FGVVSSGVVCN--GIFYVYSETDKLAGYDIERGFWIGIQT-SP 452 (464)
Q Consensus 404 ~~v~~~p~~-----------~~~~~~~v~~~--g~lYViGG~~~v~~YD~~~~~W~~l~~-lp 452 (464)
+.+..-+.. ......++.-+ +.||+ |....|++++-....|+.+.. +|
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~v-g~~~gl~~s~D~G~tW~~~~~~l~ 273 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQ-QNHCGIYRMDRREGVWKRIGDAMP 273 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEE-EETTEEEEEETTTTEEECGGGGSC
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEE-EcCCeEEEeCCCCCcceECCCCCC
No 229
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=41.01 E-value=2.2e+02 Score=26.24 Aligned_cols=65 Identities=9% Similarity=0.039 Sum_probs=32.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~ 444 (464)
.+++.++.|+.++ .+.+||..+..- ....+.......+.+..-++.+...|....|..||..+..
T Consensus 223 ~~g~~l~sgs~dg------~v~iwd~~~~~~-~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 223 PNGKYIATGGKDK------KLLIWDILNLTY-PQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp TTSSEEEEEETTC------EEEEEESSCCSS-CSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred CCCCEEEEEcCCC------eEEEEECCCCcc-cceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 3566777777654 678898843221 0111111111111111224555555555678888887643
No 230
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=40.86 E-value=67 Score=29.90 Aligned_cols=65 Identities=6% Similarity=-0.045 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEeCC-CceEEEeCCCCc
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
++.+++.|+.++ .+.+||..+..-..+..........+.+..-++.+++.|+. ..|..||+.+.+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 356777777654 68899998887644432222222222222336777777765 478999988765
No 231
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=40.67 E-value=56 Score=31.62 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=41.4
Q ss_pred CcEEEEEcCCCC---CCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCE--EEEEe-CCCceEEEeCCCCcE
Q 046692 374 RFVLIAVGGLGS---WDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI--FYVYS-ETDKLAGYDIERGFW 445 (464)
Q Consensus 374 ~~~iyviGG~~~---~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~--lYViG-G~~~v~~YD~~~~~W 445 (464)
++++|+...... ....-+.|.++|..+.+ .+..++....-.+.+..-+|+ +|+.. +.+.|..||..+.+=
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--TSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCE--EEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 468999754211 11124579999987664 444444433333333334555 66665 478999999887653
No 232
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=40.20 E-value=3.2e+02 Score=28.01 Aligned_cols=77 Identities=8% Similarity=0.046 Sum_probs=39.1
Q ss_pred CCeEEEeccccCCccccceEEeeCCCC-ceeeccccccCCCc----ceEEEEE--CCEEEEEcCCcCCccCccccCCCcc
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQD-QWHRIDASILKGRF----MFSVVSI--MDDVYVVGGCSSLTSFGRVDRSSFK 262 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~-~W~~l~~~~~~~R~----~~s~~~~--~~~IYVvGG~~gl~~~~~~~~~~~~ 262 (464)
++..++++..+.......++.+|+.+. .+..+.. ...... .....+. ++++++.+.. +
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~---------~----- 332 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRR---------D----- 332 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECT---------T-----
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeecCCCCEEEEEEcc---------C-----
Confidence 333333333333333457889999988 6666543 111110 1112233 6675555542 1
Q ss_pred ccceEEEEeCCCCCeeecC
Q 046692 263 THKGVLVFSPLTKSWRKVA 281 (464)
Q Consensus 263 ~~~~v~vydp~t~~W~~l~ 281 (464)
....+|.+|...+..+.+.
T Consensus 333 g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp SSCEEEEEETTSCEEEECC
T ss_pred CccEEEEEECCCCEEEecC
Confidence 1346888887666666554
No 233
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=38.26 E-value=3.4e+02 Score=27.75 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=34.5
Q ss_pred CceEEEeCCCCcEEE---e-ccCCCCCCcceEEeEE--CCEEEEEe--CCCceEEEeCCCCc-----EEEcccCCC
Q 046692 391 DSGEIYDSVSNKWME---I-QRLPVDFGVVSSGVVC--NGIFYVYS--ETDKLAGYDIERGF-----WIGIQTSPF 453 (464)
Q Consensus 391 ~~vevYD~~t~~W~~---v-~~~p~~~~~~~~~v~~--~g~lYViG--G~~~v~~YD~~~~~-----W~~l~~lp~ 453 (464)
+.|.++|..+++=.. + ...|.+.+. +.... ++.+|+.+ |.+.|..+|..+.. |+.+..++.
T Consensus 364 n~V~ViD~~t~kl~~~i~vgg~~Phpg~g--~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 364 NKLVVIDTKEGKLVAIEDTGGQTPHPGRG--ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TEEEEEETTTTEEEEEEECSSSSBCCTTC--EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEeccCcCCCCccc--eeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 467788888775221 1 223333111 11123 36788776 45678888877633 887766553
No 234
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=37.37 E-value=4.2e+02 Score=28.50 Aligned_cols=64 Identities=6% Similarity=-0.059 Sum_probs=38.9
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE--ECCEEEEEe-CCCceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYS-ETDKLAGYDIERG 443 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~--~~g~lYViG-G~~~v~~YD~~~~ 443 (464)
.++.||+..-. ....|++.++....=+.+..- ........++ .++.|||.- +.+.|+++|++..
T Consensus 524 ~~g~LYwtD~g-----~~~~I~~~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 524 VHGFMYWTDWG-----TPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp TTTEEEEEECS-----SSCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCEEEecCC-----CCCeEEEEecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 46789997621 124788998876554444321 1122222222 378999985 4568999998654
No 235
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=37.33 E-value=51 Score=32.49 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=44.2
Q ss_pred cCcEEEEEcC---CCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECC--EEEEEe-CCCceEEEeCCCCcEE
Q 046692 373 KRFVLIAVGG---LGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG--IFYVYS-ETDKLAGYDIERGFWI 446 (464)
Q Consensus 373 ~~~~iyviGG---~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g--~lYViG-G~~~v~~YD~~~~~W~ 446 (464)
-++++|+.-+ .+.....-+.|.++|..+.+- +..++......+.++.-++ .||+.. +.+.|..||..+++-.
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCeE--EEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 4579999743 222223356899999988764 4444433222223334465 478764 5789999999988743
No 236
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=36.06 E-value=3.7e+02 Score=27.52 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=38.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcce-EEeEE-CCEEEEEeCC-----CceEEEeCCCCcEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVS-SGVVC-NGIFYVYSET-----DKLAGYDIERGFWI 446 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~-~~v~~-~g~lYViGG~-----~~v~~YD~~~~~W~ 446 (464)
++++++.+..++ ...++.+|......+.+..-. ..... .+..- ++.||+.+.. ..|+.+|..++...
T Consensus 322 dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 395 (706)
T 2z3z_A 322 NNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK 395 (706)
T ss_dssp SSEEEEEECTTS----SCEEEEEETTSCEEEECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE
T ss_pred CCEEEEEEccCC----ccEEEEEECCCCEEEecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce
Confidence 667766665543 346778887667666664311 11111 11112 3457766543 26788888777655
Q ss_pred Ecc
Q 046692 447 GIQ 449 (464)
Q Consensus 447 ~l~ 449 (464)
.+.
T Consensus 396 ~l~ 398 (706)
T 2z3z_A 396 DLT 398 (706)
T ss_dssp ESC
T ss_pred ecc
Confidence 554
No 237
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=34.69 E-value=92 Score=28.13 Aligned_cols=64 Identities=13% Similarity=0.060 Sum_probs=41.8
Q ss_pred EEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEe-EECCEEEEEeC-CCceEEEeCCCCcEEEcc
Q 046692 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSE-TDKLAGYDIERGFWIGIQ 449 (464)
Q Consensus 376 ~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v-~~~g~lYViGG-~~~v~~YD~~~~~W~~l~ 449 (464)
.||+++..+ ..+..||+.+. .+.+.. +. ....+.+ .-+|.||+... ...|..||+.+++...+.
T Consensus 41 ~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~--~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 41 AVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS--HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEEGGG------TEEEEEETTSC-EEEEES-SC--SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEEeCCC------CEEEEEECCCC-eEEEEC-CC--CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 588887543 36899999988 665532 21 2222222 23688888764 468999999888877653
No 238
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=34.37 E-value=2.5e+02 Score=24.90 Aligned_cols=54 Identities=11% Similarity=0.024 Sum_probs=31.9
Q ss_pred ceEEeeCCCCceeeccccccCCCcc-eEEEE-ECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCe
Q 046692 207 EIHALDVSQDQWHRIDASILKGRFM-FSVVS-IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSW 277 (464)
Q Consensus 207 ~v~~yD~~t~~W~~l~~~~~~~R~~-~s~~~-~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W 277 (464)
.+..||+.+++..+.-. ....... .+++. .++...+.|+. + ..+.+||..+++-
T Consensus 46 tV~iWd~~tg~~~~~~~-~~~~~~~V~~v~~~~~~~~l~sgs~---------D-------g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTS---------S-------AEVQLWDVQQQKR 101 (318)
T ss_dssp EEEEEETTTCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEET---------T-------SEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEE-ecCCCCeEEEEEECCCCCEEEEEEC---------C-------CcEEEeecCCcee
Confidence 58999999987665422 1111111 22222 26677777772 2 2578899888754
No 239
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=33.13 E-value=4.3e+02 Score=27.31 Aligned_cols=70 Identities=9% Similarity=0.102 Sum_probs=41.3
Q ss_pred CCCCeEEEeccccCCccccceEEeeC-CCCc--eeecccccc----CCC---cceEEEE--ECCE----EEEEcCCcCCc
Q 046692 188 HQNPWLFLFGAVKDGYCSGEIHALDV-SQDQ--WHRIDASIL----KGR---FMFSVVS--IMDD----VYVVGGCSSLT 251 (464)
Q Consensus 188 ~~~~~l~v~GG~~~~~~~~~v~~yD~-~t~~--W~~l~~~~~----~~R---~~~s~~~--~~~~----IYVvGG~~gl~ 251 (464)
..++.||+.... ...++++|. .+.+ |+.-..... ..+ ...+.++ .++. ||+...
T Consensus 60 v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~----- 129 (599)
T 1w6s_A 60 VVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL----- 129 (599)
T ss_dssp EETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-----
T ss_pred EECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-----
Confidence 446777776542 246899999 7765 876433111 011 1223445 5777 887643
Q ss_pred cCccccCCCccccceEEEEeCCCCC--eee
Q 046692 252 SFGRVDRSSFKTHKGVLVFSPLTKS--WRK 279 (464)
Q Consensus 252 ~~~~~~~~~~~~~~~v~vydp~t~~--W~~ 279 (464)
...++.+|..|++ |+.
T Consensus 130 ------------dg~l~AlDa~TG~~~W~~ 147 (599)
T 1w6s_A 130 ------------DGNVAALNAETGETVWKV 147 (599)
T ss_dssp ------------TSEEEEEETTTCCEEEEE
T ss_pred ------------CCEEEEEECCCCCEEEee
Confidence 1247889988886 864
No 240
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=32.71 E-value=2.7e+02 Score=26.35 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=33.1
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE-----ECCEEEEEeCCC-ceEEEeCCCCc
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-----CNGIFYVYSETD-KLAGYDIERGF 444 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~-----~~g~lYViGG~~-~v~~YD~~~~~ 444 (464)
+.+++.|+.++ .+.+||..+......-.++... .....+. -++.+.+.|+.+ .|..||..+++
T Consensus 226 ~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 226 CCVLILGTTRG------IIDIWDIRFNVLIRSWSFGDHA-PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp SCEEEEEETTS------CEEEEETTTTEEEEEEBCTTCE-EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CCEEEEEcCCC------eEEEEEcCCccEEEEEecCCCC-ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 35566666543 5788888876543221222111 1111111 135566666554 58999998765
No 241
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=32.61 E-value=4.1e+02 Score=26.92 Aligned_cols=66 Identities=6% Similarity=-0.050 Sum_probs=33.9
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEe-EECCEEEEEeC-CCceEEEeCCCCcEEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSE-TDKLAGYDIERGFWIG 447 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v-~~~g~lYViGG-~~~v~~YD~~~~~W~~ 447 (464)
++..++.++.++ .+.+||+.+..-.. .+........+.+ .-+|+..+.|+ ...|..||..++.-..
T Consensus 293 ~~~~l~s~s~d~------~i~~~~~~~~~~~~--~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 293 TKQALVSISANG------FINFVNPELGSIDQ--VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp CSSCEEEEETTC------CEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cCCEEEEEeCCC------cEEEEeCCCCCcce--EEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 344455555433 57788987765222 1221111222221 22555555554 4578889988766543
No 242
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=31.90 E-value=4.5e+02 Score=27.17 Aligned_cols=70 Identities=13% Similarity=0.040 Sum_probs=39.8
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCc---EEEeccCCCCCCcceEEeEECCEEEEEe---CCCceEEEeCCCCcEEE
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNK---WMEIQRLPVDFGVVSSGVVCNGIFYVYS---ETDKLAGYDIERGFWIG 447 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~---W~~v~~~p~~~~~~~~~v~~~g~lYViG---G~~~v~~YD~~~~~W~~ 447 (464)
++.+|+....+. ....+.++|+.+.. |+.+.+-.... ........++.|++.. |...|+.+|+..+.-..
T Consensus 281 ~g~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 281 KDRFYVLTDEGA---PRQRVFEVDPAKPARASWKEIVPEDSSA-SLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRT 356 (695)
T ss_dssp TTEEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEECCCSSC-EEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEE
T ss_pred CCcEEEEECCCC---CCCEEEEEeCCCCCccCCeEEecCCCCC-eEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEE
Confidence 445776654321 23578889987654 88875322111 1222334588888775 34467888875543333
No 243
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=31.57 E-value=3.4e+02 Score=25.65 Aligned_cols=24 Identities=13% Similarity=0.188 Sum_probs=17.2
Q ss_pred EECCEEEEEeCC-CceEEEeCCCCc
Q 046692 421 VCNGIFYVYSET-DKLAGYDIERGF 444 (464)
Q Consensus 421 ~~~g~lYViGG~-~~v~~YD~~~~~ 444 (464)
..++.+++.|+. ..|..||+.+.+
T Consensus 337 ~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 337 VSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EETTEEEEEEGGGTEEEEEETTCGG
T ss_pred ECCceEEEecCCCCeEEEEECCCcc
Confidence 447777777764 578889987654
No 244
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=29.03 E-value=3.2e+02 Score=24.60 Aligned_cols=62 Identities=10% Similarity=0.022 Sum_probs=32.6
Q ss_pred cEEEEEcCCCCCCCccCceEEEeCCCCcEE--EeccCCCC--CCcceEEe-EECCEEEEEeCC-CceEEEeCCC
Q 046692 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWM--EIQRLPVD--FGVVSSGV-VCNGIFYVYSET-DKLAGYDIER 442 (464)
Q Consensus 375 ~~iyviGG~~~~~~~l~~vevYD~~t~~W~--~v~~~p~~--~~~~~~~v-~~~g~lYViGG~-~~v~~YD~~~ 442 (464)
+.+++.|+.++ .+.+||..+..-. .+..+... ......++ .-++.+.+.|+. ..|..||+.+
T Consensus 299 ~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVG------KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTS------CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCC------cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 57777777644 6889999876311 11122221 11222221 225666666654 4788888753
No 245
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=28.97 E-value=3e+02 Score=24.18 Aligned_cols=23 Identities=22% Similarity=0.078 Sum_probs=17.7
Q ss_pred ccCcEEEEEcCCCCCCCccCceEEEeCCCCc
Q 046692 372 SKRFVLIAVGGLGSWDEPLDSGEIYDSVSNK 402 (464)
Q Consensus 372 ~~~~~iyviGG~~~~~~~l~~vevYD~~t~~ 402 (464)
..++++|.+-|. ..+.||+.+++
T Consensus 172 ~~~g~~YfFkg~--------~y~rf~~~~~~ 194 (207)
T 1pex_A 172 EKNGYIYFFNGP--------IQFEYSIWSNR 194 (207)
T ss_dssp EETTEEEEEETT--------EEEEEETTTTE
T ss_pred EcCCcEEEEECC--------EEEEEeCCccE
Confidence 458899999874 56788887765
No 246
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=28.00 E-value=5.2e+02 Score=26.70 Aligned_cols=68 Identities=15% Similarity=0.047 Sum_probs=40.3
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCC---cEEEeccCCCCCCcceEEeEE-CCEEEEEeC---CCceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSN---KWMEIQRLPVDFGVVSSGVVC-NGIFYVYSE---TDKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~---~W~~v~~~p~~~~~~~~~v~~-~g~lYViGG---~~~v~~YD~~~~~ 444 (464)
.++.||+.+..+. ....+.++|+.+. .|+.+.+-. +.......... ++.|++... ...|+.+|+.+++
T Consensus 296 dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 296 EGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp ETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred cCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 3567888775432 2347889998775 588875422 11122223345 777777653 3468888885554
No 247
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.44 E-value=4.2e+02 Score=25.46 Aligned_cols=63 Identities=11% Similarity=0.016 Sum_probs=36.9
Q ss_pred cCcEEEEEcC-CCCCCCccCceEEEeCCCCcEEEeccCCC------------CCCcceEEeE-ECCEEEEEe-CCCceEE
Q 046692 373 KRFVLIAVGG-LGSWDEPLDSGEIYDSVSNKWMEIQRLPV------------DFGVVSSGVV-CNGIFYVYS-ETDKLAG 437 (464)
Q Consensus 373 ~~~~iyviGG-~~~~~~~l~~vevYD~~t~~W~~v~~~p~------------~~~~~~~~v~-~~g~lYViG-G~~~v~~ 437 (464)
.++.||+... . ...|.++|+.+..-+.+..-+. .+......++ -+|.|||.. +.+.|.+
T Consensus 332 ~dG~lyvad~~~------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 332 EDGNFYIVDGFK------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp TTCCEEEEETTT------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred CCCCEEEEeCCC------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 3567999865 3 2378899976776666543211 1122222222 258999986 4467887
Q ss_pred EeCC
Q 046692 438 YDIE 441 (464)
Q Consensus 438 YD~~ 441 (464)
|+++
T Consensus 406 i~~e 409 (409)
T 3hrp_A 406 YAVE 409 (409)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7753
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=27.14 E-value=3.4e+02 Score=24.27 Aligned_cols=62 Identities=18% Similarity=0.151 Sum_probs=32.0
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCC-CcEEEeccCCCCCCcceEEeEECCEEEEEeCCCceEEEeCCCCc-EE
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERGF-WI 446 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t-~~W~~v~~~p~~~~~~~~~v~~~g~lYViGG~~~v~~YD~~~~~-W~ 446 (464)
.++.||+.. ..+.+||+.. ..|+...... ...+.+..-+|.||+......+.+||+.... |.
T Consensus 186 ~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 186 KDGTIYFGS---------DKVYAINPDGTEKWNFYAGYW---TVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWR 249 (330)
T ss_dssp TTCCEEEES---------SSEEEECTTSCEEEEECCSSC---CCSCCEECTTSCEEEEETTTEEEEECTTSCEEEE
T ss_pred CCCEEEEEe---------CEEEEECCCCcEEEEEccCCc---ceeceEECCCCeEEEEcCCCeEEEECCCCCEeEE
Confidence 356777754 2567888432 2465542211 1111121224577776555678888765443 44
No 249
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=26.23 E-value=2.7e+02 Score=26.18 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=43.9
Q ss_pred CcEEEEEcCCCC----CCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE-CCEEEEEeCCCceEEEeCCCCcEEEc
Q 046692 374 RFVLIAVGGLGS----WDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSETDKLAGYDIERGFWIGI 448 (464)
Q Consensus 374 ~~~iyviGG~~~----~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~-~g~lYViGG~~~v~~YD~~~~~W~~l 448 (464)
++++|+....++ ....-..+.++|..+.+ .+..++... -.+.+..- +..||+.++ +.|..||..++.=+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 478998754211 11124579999998774 565555544 22222222 457888777 9999999988622344
Q ss_pred cc
Q 046692 449 QT 450 (464)
Q Consensus 449 ~~ 450 (464)
..
T Consensus 341 ~~ 342 (361)
T 2oiz_A 341 RT 342 (361)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 250
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.53 E-value=4.9e+02 Score=25.54 Aligned_cols=67 Identities=4% Similarity=-0.052 Sum_probs=33.1
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceE-EeEECCEEEEEeCC-CceEEEeCCCCcEEEc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYSET-DKLAGYDIERGFWIGI 448 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~-~v~~~g~lYViGG~-~~v~~YD~~~~~W~~l 448 (464)
.+++.++.|+.++ .+.+||.....-..+. .......+ +..-++++.+.++. ..|..||.....-..+
T Consensus 395 ~dg~~l~~~~~d~------~v~~~~~~~~~~~~~~---~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 395 PDGQTIASASDDK------TVKLWNRNGQLLQTLT---GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTL 463 (577)
T ss_dssp TTSSCEEEEETTS------EEEEECTTCCEEEEEE---CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEeCCC------EEEEEeCCCCEEEEec---CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEE
Confidence 3456666676543 6788886543322222 11111111 12235555555543 4677788765544433
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=23.69 E-value=4.3e+02 Score=24.23 Aligned_cols=64 Identities=6% Similarity=-0.074 Sum_probs=39.0
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE--CCEEEEEe-CCCceEEEeCCCC
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYS-ETDKLAGYDIERG 443 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~--~g~lYViG-G~~~v~~YD~~~~ 443 (464)
.++.||+..-.. ...++++++....=+.+..- ........++- ++.||+.- +.+.|++||++..
T Consensus 130 ~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~--~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 130 VHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp TTTEEEEEECSS-----SCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEEC--CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 468899876321 24789999865544444221 12233333332 68999986 4568999998754
No 252
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=22.57 E-value=4.6e+02 Score=24.23 Aligned_cols=81 Identities=10% Similarity=-0.025 Sum_probs=48.6
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEECCEEEEEe-CCCceEEEeCCCCcE-EEc-c
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETDKLAGYDIERGFW-IGI-Q 449 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~~g~lYViG-G~~~v~~YD~~~~~W-~~l-~ 449 (464)
.+++||+.-.. ...|+++|.....=+.+.. .......+.++.++.+|+.. +...|.++|+.+++- ..+ .
T Consensus 176 ~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 176 EEQKLYWADAK------LNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSCSCEEEEC--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred cCCEEEEEECC------CCEEEEEcCCCCceEEEec--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 36899998643 4578999987544344432 11222333456789999986 456899999965543 222 2
Q ss_pred cCCCCccccccC
Q 046692 450 TSPFPPRVIEYY 461 (464)
Q Consensus 450 ~lp~pr~~~~~~ 461 (464)
.++.|..+.-|+
T Consensus 248 ~~~~P~~i~v~~ 259 (318)
T 3sov_A 248 DIFSPMDIHAFS 259 (318)
T ss_dssp CCSSCCCEEEEC
T ss_pred CCCCCcEEEEec
Confidence 344555544443
No 253
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=22.16 E-value=3e+02 Score=24.17 Aligned_cols=63 Identities=14% Similarity=0.128 Sum_probs=37.8
Q ss_pred CCeEEEeccccCCccccceEEeeCCCCceee-----ccc-cccCCCcceEEEEECCEEEEEcCCcCCccCccccCCCccc
Q 046692 190 NPWLFLFGAVKDGYCSGEIHALDVSQDQWHR-----IDA-SILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKT 263 (464)
Q Consensus 190 ~~~l~v~GG~~~~~~~~~v~~yD~~t~~W~~-----l~~-~~~~~R~~~s~~~~~~~IYVvGG~~gl~~~~~~~~~~~~~ 263 (464)
++.+|+|-| +..|.||..+++-.. +.. .+..+..--++...++.+|.+-|
T Consensus 127 ~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg----------------- 182 (207)
T 1pex_A 127 TGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNG----------------- 182 (207)
T ss_dssp TSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEET-----------------
T ss_pred CCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEEC-----------------
Confidence 467787766 367899987654221 111 01112222234446899999987
Q ss_pred cceEEEEeCCCCCe
Q 046692 264 HKGVLVFSPLTKSW 277 (464)
Q Consensus 264 ~~~v~vydp~t~~W 277 (464)
+.+|+||+.+++=
T Consensus 183 -~~y~rf~~~~~~v 195 (207)
T 1pex_A 183 -PIQFEYSIWSNRI 195 (207)
T ss_dssp -TEEEEEETTTTEE
T ss_pred -CEEEEEeCCccEE
Confidence 2489999987654
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=22.12 E-value=4.9e+02 Score=24.33 Aligned_cols=171 Identities=8% Similarity=-0.107 Sum_probs=89.1
Q ss_pred cceEEeeCCCCceeeccccccCCCcceEEEE--ECCEEEEEcCCcCCccCccccCCCccccceEEEEeCCCCCeeecCC-
Q 046692 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVS--IMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVAS- 282 (464)
Q Consensus 206 ~~v~~yD~~t~~W~~l~~~~~~~R~~~s~~~--~~~~IYVvGG~~gl~~~~~~~~~~~~~~~~v~vydp~t~~W~~l~~- 282 (464)
+.+..+++.......+...+ ....+++. .++.||++.- ....++++++.....+.+..
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~---~~~~~l~~d~~~~~ly~~D~----------------~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL---ENAIALDFHHRRELVFWSDV----------------TLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC---SCEEEEEEETTTTEEEEEET----------------TTTEEEEEETTSCSCEEEECS
T ss_pred cceEEEeCCCCeeEEeecCC---CceEEEEEeccccEEEEEec----------------cCCceEEEecCCCCceEEEeC
Confidence 35788888877766553311 12234443 3688999864 12458899998776554322
Q ss_pred -CCCCccccEEEEecCCCccccccccCCCCCCccceEEecCcCCCCCCccccccceeeecCCCcccc---cCCCCCCccc
Q 046692 283 -MRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG---SLLPNRKSYK 358 (464)
Q Consensus 283 -m~~~R~~~~~~~~~~~~~~~~~~~~~~~~~gk~~iyviGG~~~~~~~~~~l~~ve~Ydp~~n~W~~---~~l~~~~~~~ 358 (464)
+..| .++++-... + .||+.-.. ...++++++....-+. ..+..+
T Consensus 114 ~~~~p---~glavd~~~--------------g--~ly~~d~~---------~~~I~~~~~dG~~~~~l~~~~l~~P---- 161 (349)
T 3v64_C 114 GLESP---GGLAVDWVH--------------D--KLYWTDSG---------TSRIEVANLDGAHRKVLLWQSLEKP---- 161 (349)
T ss_dssp SCSCC---CEEEEETTT--------------T--EEEEEETT---------TTEEEEEETTSCSCEEEECTTCSCE----
T ss_pred CCCCc---cEEEEecCC--------------C--eEEEEcCC---------CCeEEEEcCCCCceEEEEeCCCCCc----
Confidence 2222 233332111 2 25655422 2345555554322111 011111
Q ss_pred eecccccccccccc--cCcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeE--ECCEEEEEe-CCC
Q 046692 359 FIRQKSDQSITKAS--KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYS-ETD 433 (464)
Q Consensus 359 ~~~~~~~~~~~~~~--~~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~--~~g~lYViG-G~~ 433 (464)
.+.++ .++.||+..-.. ...|+++++....-+.+.. .........++ .++.||+.- +.+
T Consensus 162 ---------~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 162 ---------RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp ---------EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ---------ceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCCC
Confidence 11222 367899876321 2478999987654444422 12223333333 378999986 456
Q ss_pred ceEEEeCCCC
Q 046692 434 KLAGYDIERG 443 (464)
Q Consensus 434 ~v~~YD~~~~ 443 (464)
.|+++|++..
T Consensus 226 ~I~~~~~dG~ 235 (349)
T 3v64_C 226 VIERANLDGS 235 (349)
T ss_dssp EEEEEETTSC
T ss_pred EEEEEeCCCC
Confidence 8999998754
No 255
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=21.85 E-value=98 Score=29.59 Aligned_cols=66 Identities=9% Similarity=-0.013 Sum_probs=33.1
Q ss_pred ccccCcEEEEEcCCCCCCCccCceEEEeCCCC--cEEEeccCCCCCCcceEEeEECCEEEEEeC-CCceEEEeCCCC--c
Q 046692 370 KASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TDKLAGYDIERG--F 444 (464)
Q Consensus 370 ~~~~~~~iyviGG~~~~~~~l~~vevYD~~t~--~W~~v~~~p~~~~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~--~ 444 (464)
.++.++.||+.+. + ..+.++|..+. .|+.-. . + .....++.+|.+|+.+. ...|.++|.+++ .
T Consensus 5 P~v~~~~v~~gs~-d------g~v~a~d~~tG~~~W~~~~--~-~--~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 5 VTLPETLLFVSTL-D------GSLHAVSKRTGSIKWTLKE--D-P--VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp ---CTTEEEEEET-T------SEEEEEETTTCCEEEEEEC--C-C--SCCCC-----CCEEECTTTCCEEEC-----CCS
T ss_pred CeeeCCEEEEEcC-C------CEEEEEECCCCCEEEEecC--C-C--ceecceEcCCCEEEEeCCCCEEEEEECCCCcee
Confidence 3556778887543 2 26889998776 587643 1 1 11222356777888753 457999998654 5
Q ss_pred EEE
Q 046692 445 WIG 447 (464)
Q Consensus 445 W~~ 447 (464)
|..
T Consensus 73 w~~ 75 (369)
T 2hz6_A 73 TKL 75 (369)
T ss_dssp EEC
T ss_pred eee
Confidence 653
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=21.84 E-value=2.1e+02 Score=26.21 Aligned_cols=59 Identities=12% Similarity=0.059 Sum_probs=36.2
Q ss_pred CceEEEeCCCCcEEEeccCCCC-----------------CCcceEEeEE--CCEEEEEeCCCceEEEeCCCCcEEEcc
Q 046692 391 DSGEIYDSVSNKWMEIQRLPVD-----------------FGVVSSGVVC--NGIFYVYSETDKLAGYDIERGFWIGIQ 449 (464)
Q Consensus 391 ~~vevYD~~t~~W~~v~~~p~~-----------------~~~~~~~v~~--~g~lYViGG~~~v~~YD~~~~~W~~l~ 449 (464)
..+..||+.++.++.+...... .......++- +|.|||......+..||+.++..+.+.
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~ 117 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLA 117 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEec
Confidence 3688899988877765321100 0112222333 689999865566999999877655543
No 257
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=21.49 E-value=6.9e+02 Score=25.81 Aligned_cols=78 Identities=12% Similarity=-0.040 Sum_probs=46.3
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEecc-CCCCCCcceEEeEECCEEEEEeC-CCceEEEeCCCCc-EEEcc-
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR-LPVDFGVVSSGVVCNGIFYVYSE-TDKLAGYDIERGF-WIGIQ- 449 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~-~p~~~~~~~~~v~~~g~lYViGG-~~~v~~YD~~~~~-W~~l~- 449 (464)
+++||+.-.. .+.|+++|+....=+.+.. ++.+ .+.++.++.||+.-- .+.|.++|..+++ -+.+.
T Consensus 177 ~~~LY~aD~~------~~~I~~~d~dG~~~~v~~~~l~~P----~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 177 KRRLYWTDLD------TNLIESSNMLGLNREVIADDLPHP----FGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEEECCSCE----EEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred cCEEEEEECC------CCEEEEEcCCCCceEEeeccCCCc----eEEEEECCEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 5799998753 4578999986542233322 3222 234567899999873 5689999975542 23332
Q ss_pred cCCCCccccccC
Q 046692 450 TSPFPPRVIEYY 461 (464)
Q Consensus 450 ~lp~pr~~~~~~ 461 (464)
.+..|..++-|+
T Consensus 247 ~~~~p~~i~v~~ 258 (628)
T 4a0p_A 247 HLDYVMDILVFH 258 (628)
T ss_dssp SCCSCCEEEEEC
T ss_pred CCCCcceeeeee
Confidence 234454444444
No 258
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.40 E-value=5.7e+02 Score=24.81 Aligned_cols=51 Identities=10% Similarity=0.047 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCC-----CcEEEeccCCCCCCcceEEeE-ECCEEEEEeC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVS-----NKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSE 431 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t-----~~W~~v~~~p~~~~~~~~~v~-~~g~lYViGG 431 (464)
+|.||..-- ..+.|.++++.+ +....+..=+ ...+.....+ -+|.||+...
T Consensus 286 ~G~ly~~~~------~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 286 TKVIFFAEA------NTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TCEEEEEES------SSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEEC
T ss_pred CCeEEEEec------cCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEEC
Confidence 577777432 245889999987 3557776544 3334433322 3778999863
No 259
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.27 E-value=3.6e+02 Score=24.87 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=42.6
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCC----CCcceEEeEE--CCEEEEEe----CCCceEEEeCCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD----FGVVSSGVVC--NGIFYVYS----ETDKLAGYDIERG 443 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~----~~~~~~~v~~--~g~lYViG----G~~~v~~YD~~~~ 443 (464)
+++||++.-... ......+.+||+.+++-...-.++.. .......++- ++.+||.. +...|..||+.++
T Consensus 77 ~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 77 NGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp SSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred CCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 468999762100 00124789999998874332233321 1122223333 57999985 3568999999765
Q ss_pred -cEEEcc
Q 046692 444 -FWIGIQ 449 (464)
Q Consensus 444 -~W~~l~ 449 (464)
.|+.+.
T Consensus 156 ~~~r~~~ 162 (343)
T 2qe8_A 156 LAARVLQ 162 (343)
T ss_dssp CEEEECT
T ss_pred CEEEEec
Confidence 566553
No 260
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=20.85 E-value=4.2e+02 Score=23.13 Aligned_cols=64 Identities=8% Similarity=-0.134 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCCCCCccCceEEEeCCCCcEEEeccCCCCCCcceEEeEE--CCEEEEEe-CCCceEEEeCCCC
Q 046692 374 RFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYS-ETDKLAGYDIERG 443 (464)
Q Consensus 374 ~~~iyviGG~~~~~~~l~~vevYD~~t~~W~~v~~~p~~~~~~~~~v~~--~g~lYViG-G~~~v~~YD~~~~ 443 (464)
++.||+..... ....++++++....-+.+.... .......++- ++.||+.. +.+.|.+||+...
T Consensus 133 ~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 133 RGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp TTEEEEEECCS----SSCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCEEEEEECCC----CCcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 68999986431 1246788888654434442211 1222222232 57899986 4578999999754
No 261
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=20.11 E-value=6.2e+02 Score=26.45 Aligned_cols=63 Identities=14% Similarity=-0.023 Sum_probs=35.8
Q ss_pred cCcEEEEEcCCCCCCCccCceEEEeCCCCcE-----EEec-cCCCCCCcceEEeEEC--CEEEEEeCCCceEEEeCCCCc
Q 046692 373 KRFVLIAVGGLGSWDEPLDSGEIYDSVSNKW-----MEIQ-RLPVDFGVVSSGVVCN--GIFYVYSETDKLAGYDIERGF 444 (464)
Q Consensus 373 ~~~~iyviGG~~~~~~~l~~vevYD~~t~~W-----~~v~-~~p~~~~~~~~~v~~~--g~lYViGG~~~v~~YD~~~~~ 444 (464)
.++++|.+-|. ..+.||..+++= +.+. ..+.......++...+ |++|++-|. ..++||..+..
T Consensus 547 ~~gktYFFkG~--------~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~-~Ywr~d~~~~~ 617 (631)
T 1ck7_A 547 KNKKTYIFAGD--------KFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA-YYLKLENQSLK 617 (631)
T ss_dssp TTCEEEEEETT--------EEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEETT-EEECCBTTBTT
T ss_pred CCCeEEEEECC--------EEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC-EEEEEeCccce
Confidence 46899999874 568898766521 0111 1111011122333333 899999775 56788876543
Done!