BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046694
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
+I + Y R G++++ ++FDR+ +D SW +LI YG+ G AI +FE M +G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLLIKYNQ 115
PV+ + VL ACS GLVE+GK+ F+ M + +KP HYACMV LL + N+
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y R G +D A+ +F +PV++ SW +I Y G+ A+ F M + + P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 66 --VSHIGVLTACSLGGLVEKGK 85
V+ + VL AC+ +E+GK
Sbjct: 284 NSVTMVSVLQACASLAALEQGK 305
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y+ G +D A K+FD+ + W L + G + + L+ M GVE
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 66 VSHIGVLTAC 75
++ VL AC
Sbjct: 179 FTYTYVLKAC 188
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
M+ +D Y + GR+DLA+ IF+ + ++ SW ++I+GY G A+ F MRE G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIKYNQ 115
V ++ +GVL+AC GGLVE+GK +F M++ ++P +HY C+V LL + Q
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + G + A K+FD P + SW +I G G + A+ +F M+ G+E
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 66 VSHIGVLTACSLGGL 80
+ + V +C GGL
Sbjct: 219 FTMVSVTASC--GGL 231
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G ++ + ++FD KD+ W +I GYGM G+++ AI LF+ M E V+
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK 112
+ + +L+AC+ GLVE+GKK F +M +VKP HY+C+V LL +
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSR 681
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVK-DSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64
L Y + + +A K+F R+ + + +W T++ GYG + I LF ++ G+E
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 65 PVSHIGVLTACSLGGLVEKGKKF 87
S V+++CS G V GK
Sbjct: 433 SASATSVISSCSHIGAVLLGKSL 455
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY---Y 64
FY++ G + A +FD +P +D +W +I G+ GE + + M G +
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 65 PVSHIGVLTACSLGGLVEKGK 85
P + ACS G +++G+
Sbjct: 230 PRTLECGFQACSNLGALKEGR 250
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
FY+++G A F L +D SW ++I G+++ + ++F M+ G+ +P
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM--HP 329
Query: 66 VSHIGVLTAC---SLGG--LVEKGKKF 87
GV+ +C LG LV +GK F
Sbjct: 330 ---DGVVISCLINELGKMMLVPQGKAF 353
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ +D Y + G + +A ++F + +W +I Y + + AI LF+ M +
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSEN 528
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE 100
+ ++ + +L AC G +E+G +M R + TE
Sbjct: 529 FKPSSITLVTLLMACVNTGSLERG-----QMIHRYITETE 563
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D YT+ G++D+A ++FD + +D SW T++ G+G+ G A++LF +M+E GV
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR--NVKPTETHYACMVYLLIK 112
V+ + +L+ACS GLV++GK+ F+ M NV P HY CM LL +
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE-DGVEYY 64
+DFY + G +++A K+FD +P +D +W +I G+ + L I LF MR DG+
Sbjct: 145 VDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 65 PVSHIGVLTACSLGGLVEKGK 85
+ +G+ A G + +GK
Sbjct: 205 LSTIVGMFPALGRAGALREGK 225
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ FY + G + A + F + +KD S+ +LI G + + + LF MR G+
Sbjct: 350 ISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDI 409
Query: 66 VSHIGVLTACS 76
+ +GVLTACS
Sbjct: 410 TTLLGVLTACS 420
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + LA+ +FD + KD SW +I GYGM G AI LF MR+ G+E
Sbjct: 541 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIK 112
+S + +L ACS GLV++G +FF+ M+ ++PT HYAC+V +L +
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y++ G +D A +F + + S+ ++I GY G A+ LFE M E+G+
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
+ VL C+ L+++GK+
Sbjct: 398 YTVTAVLNCCARYRLLDEGKR 418
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67
FY + R+D A K+FD + +D SW ++I GY G + +++F M G+E +
Sbjct: 239 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298
Query: 68 HIGVLTACSLGGLVEKGK 85
+ V C+ L+ G+
Sbjct: 299 IVSVFAGCADSRLISLGR 316
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + A +F + VKD SW T+I GY + A++LF + E+ + P
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-RFSP 497
Query: 66 VSHI--GVLTACSLGGLVEKGKK 86
VL AC+ +KG++
Sbjct: 498 DERTVACVLPACASLSAFDKGRE 520
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVE 62
YT G + A+++FD + ++ + W L+ G+ +I LF+ M GVE
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 35 TLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94
TL+ Y G+LD A +F M + V VS+ ++ + GL + K F+EM+
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 95 NVKP 98
+ P
Sbjct: 392 GISP 395
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 5 RLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64
RLD + + G + A +F+ + ++ SW T+I+GY M G+ A+ LF M+ +G+
Sbjct: 251 RLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPN 310
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFDEM---QARNVKPTETHYACMVYLL 110
V+ +GVL+ACS GLV +GK++F M +N++P + HYACMV LL
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL 359
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y + G + A +F+ + VKD +W + G +A+ F M D V++ +
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARNV 96
+ +L+AC G +E G++ +D + +
Sbjct: 214 VSMLSACGQLGSLEIGEEIYDRARKEEI 241
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + GR++ A K FDR+ K+ SW +I GYGM G A+ LF AM + GV
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
++ + VL ACS GL +G ++F+ M+ R V+P HY CMV LL
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLL 434
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM------REDGVE 62
Y+ G+++ A K+FD +P ++ SW ++I GY + G A++LF+ + +D +
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 63 YYPVSHIGVLTACS---LGGLVEKGKKF 87
+ + V++ACS GL E F
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSF 208
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + A +IFD + +D SW TLI+GY G + A+ LF+ M+ G+E
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARN-VKPTETHYACMVYLLIK 112
V+ +GVLTACS GLVE+G K + MQ + + PT+ H +C+V LL +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
D Y R G ++ A ++FD++ D+ASW +I G G D A+++F MR G
Sbjct: 313 DMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 51/110 (46%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y + G + A ++FD +P ++ S+ ++I GY G+ AI L+ M ++ +
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQ 168
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115
+ ++ AC+ V GK+ ++ ++ + +++NQ
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y R ++ A+++F +P+KD SW ++I G+ LG A++ + M GV ++P +
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV-FHPNEY 271
Query: 69 I--GVLTACS 76
I L ACS
Sbjct: 272 IFGSSLKACS 281
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ G I+ A +F+RLP ++ +W +I G+ + G+ AI+ F MR+ GV
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
V++I +LTACS GGLVE+G+++F +M ++P HY CMV LL
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 15 IDLANKIFDRLPVKDSASWITLILGYGMLGELD--VAINLF-EAMREDGVEYYPVSHIGV 71
+D A+KIF+++P ++ SW T+I G+ E +AI LF E M ++ VE + V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 72 LTACSLGGLVEKGKK 86
L AC+ G +++GK+
Sbjct: 135 LKACAKTGKIQEGKQ 149
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y R G A +FD++ + SW T+I GY + G A+ +F M++ +
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 274
Query: 66 VSHIGVLTACSLGGLVEKGK 85
V+ + VL A S G +E G+
Sbjct: 275 VTLVSVLPAISRLGSLELGE 294
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 33 WITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQ 92
W +I GY LG+ A LF+ MR+ V VS +++ SL G + + F EM+
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 93 ARNVKPTETHYACMVYLL 110
+++P +Y +V +L
Sbjct: 267 KGDIRP---NYVTLVSVL 281
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I ++K+F+ L K +ASW +I+GYG+ G AI LFE M+ G
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIKYNQ 115
++ +GVLTAC+ GL+ +G ++ D+M++ +KP HYAC++ +L + Q
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y G + +FD + K SW T+I GY G D A+ +F M G++
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 66 VSHIGVLTACSL 77
+S + V ACSL
Sbjct: 598 ISMMPVFGACSL 609
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y + G + A ++F + K SW LI G+ + ++++ M+ G+ +
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 69 IGVLTACS 76
+L+ACS
Sbjct: 500 CSLLSACS 507
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ G I A +F + ++S ++ T+ILGYG G + AI+LF +M+E G++
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
++ + VL+ACS GL+++G K F+EM + N++P+ HY C+ +L
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 6 LDFYTRTGRIDLANKIFDR--LPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY 63
+D Y+++G I ++ K+F+ +D A+W ++I GY G + +F M E +
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 64 YPVSHIGVLTACSLGGLVEKGKKF 87
V+ +L ACS G V+ GK+
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQL 543
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 16 DLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTAC 75
D+ K+FD + K+ +W TLI Y G A F M V+ PVS + V A
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 76 SLGGLVEKGKKFFDEM 91
S+ ++K F+ M
Sbjct: 225 SISRSIKKANVFYGLM 240
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 2 IEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGY 40
I RL + G LA ++FD +P + W T+I+G+
Sbjct: 42 IRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGF 80
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y + G I+ AN +F + KD SW T+I GY G +VA+ FE+M+ +G++ +
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 69 IGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
+ VL+ACS GLV+KG+++F M Q V P HYACMV LL
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y R G +LA K+FD +P +D SW +I GY L A LFE M E V S
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSW 160
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARN-----------VKPTETHYACMVY 108
+L+ + G V+ + FD M +N V+ ++ ACM++
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y ++G+ID A ++FD PV+D +W ++ GY ++ A LF+ M E VS
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSW 315
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101
+L G +E K+ FD M RNV T
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y + G +D A +FDR+P K+ SW L+ Y +++ A LF++ RE+
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-RENWAL--- 219
Query: 66 VSHIGVLTACSLGGLVEKGK-----KFFDEMQARNVKPTET 101
V C LGG V+K K +FFD M R+V T
Sbjct: 220 -----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT 255
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y + G+I A +FD++P +D SW +I GY G A+ LF M +G S
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 69 IGVLTACSLGGLVEKGKKF 87
L+ C+ +E GK+
Sbjct: 413 SSALSTCADVVALELGKQL 431
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y + R+++A ++FD +P ++ ++W T+I GY G++ A NLF+ M + PVS
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD----PVSW 377
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQ 92
++ S G + + F +M+
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQME 401
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
+ + +I A + FD + V+D SW T+I GY G++D A LF+ PV
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE--------SPVQD 280
Query: 69 IGVLTACSLG----GLVEKGKKFFDEMQARN 95
+ TA G +VE+ ++ FD+M RN
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y RTGR + A ++F R+P S S+ +I GY GE ++A LF+ M E + + V
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101
G + +LG K ++ F+ M R+V T
Sbjct: 134 KGYVRNRNLG----KARELFEIMPERDVCSWNT 162
>sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protein At1g28690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2
SV=2
Length = 520
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y + G I+ A ++FD++ K+ SW ++I GYG G + A+ LF M+E +E
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
V+ +G L+ACS GLV+KG + F+ MQ ++KP HYAC+V L+
Sbjct: 375 VTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLM 420
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+DFY++ GR+D A +FD+LP K+ SW L+ GY G A+ LFE M V
Sbjct: 367 VDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNH 426
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
V+ + VL+AC+ GL E+G + F M + +KP HYACM+ LL
Sbjct: 427 VTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV 61
+D Y++ G I+ A F+ +P K + +W +I GY + G + A+ L MR+ GV
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRED 59
M+ L + + G I A ++FD +P ++ S+ ++I G+ G A LF+ M E+
Sbjct: 160 MMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + G +D +F+++P ++ SW ++I M GE A++LF M+++ VE
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIKYN 114
V+ +GVL CS GLVE+GKK F M N+ P HY CMV L + N
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y GRI+ A +FD + +D +W T+I Y G +D A LFE M++ V
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETH 102
+ +++AC G + + ++ + +V+ +TH
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIENDVR-MDTH 248
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y++ GR+D A IFD+ KD W T+I Y A+ +FE M G++ VS
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 69 IGVLTACSLGGLVEKGK 85
V++AC+ G+++K K
Sbjct: 348 FSVISACANLGILDKAK 364
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y G +D+A + F ++ V++ ++ GY G LD A +F+ + + V
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL----VCW 312
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARNVKP 98
+++A ++ + F+EM +KP
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKP 342
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y++ G I+ A +IFD +P K ASW +I GY + G A++LF M +E P
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM---IEEKP 372
Query: 66 --VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110
++ + V+TAC+ GGLVE+G+K+F M+ + HY CMV LL
Sbjct: 373 DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLL 419
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G++ A FD +P + SW LI GY GELD+A LF+ M P
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM--------P 171
Query: 66 VSHIGVLTACSLGGLVEKG-----KKFFDEMQARNV 96
V+ + G V+ G ++ FDEM + V
Sbjct: 172 HVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D + ++G + A ++FD + K +W T+I GY + ++D A LF+AM E +
Sbjct: 183 MDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL---- 238
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQA 93
VS ++ ++G + F EMQA
Sbjct: 239 VSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
>sp|Q5XEY7|PP309_ARATH Pentatricopeptide repeat-containing protein At4g14170
OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2
Length = 477
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV 66
D Y + +D A+ +F + +D SW +LILGYG+ G++ ++ LF+ M ++G+E V
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 67 SHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYA 104
+ +GVL+AC+ GGLVEK +F MQ N+ P HYA
Sbjct: 338 TFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYA 375
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y G++ A K+FD +PV+DS + + GY GE + + +F M G V
Sbjct: 179 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 238
Query: 69 IGVLTACSLGGLVEKGKK 86
+ +L AC G ++ GK
Sbjct: 239 VSLLMACGQLGALKHGKS 256
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D + + G ++ A +FDR +D W +I+GYG+ G AI+L+ AM GV
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110
V+ +G+L AC+ G+V +G FF+ M + P + HYAC++ LL
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLL 469
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 2 IEPRL-----DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM 56
IEP L Y + G++ A +FD++ + W +I GY G AI++F M
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 57 REDGVEYYPVSHIGVLTACSLGGLVEKGKKFFD 89
V +S ++AC+ G +E+ + ++
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDSA--SWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
Y + R+ A +F+ LP+ + SW ++ Y GE A+ +F MR+ V+
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
V+ + VL A + +++G+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRS 243
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ GR+D A + F+ +PV++S SW ++I GY G+ + A+ LFE M+ DG + P
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG-QTPP 719
Query: 66 --VSHIGVLTACSLGGLVEKGKKFFDEMQ-ARNVKPTETHYACMVYLL 110
V+ +GVL+ACS GL+E+G K F+ M + + P H++CM +L
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 767
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y TG A K+FD +P+++ SW ++ GY GE A+ M ++G+
Sbjct: 43 INAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQ 102
Query: 66 VSHIGVLTACSLGGLV 81
+ + VL AC G V
Sbjct: 103 YAFVSVLRACQEIGSV 118
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + G I A ++F + KDS SW ++I G G A+ +++MR +
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDE 90
+ I L++C+ + G++ E
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGE 440
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 9 YTRTGRIDLANKIFDRLPVK-DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67
Y + G +D KIF R+ + D+ +W ++I GY L A++L M + G
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 68 HIGVLTACSLGGLVEKG 84
+ VL+A + +E+G
Sbjct: 622 YATVLSAFASVATLERG 638
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLI 37
+ Y TG ++ KIF +P D SW ++I
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + A +FD + VKDSASW +I GYG+ ++A+++F M GV+
Sbjct: 409 MDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDE 468
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQA-RNVKPTETHYACMVYLL 110
++ +G+L ACS G + +G+ F +M+ N+ PT HYAC++ +L
Sbjct: 469 ITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDML 514
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 9 YTRTGRIDLANKIFDRLPVKD-SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67
Y++ ++ A K+FD LP +D S W L+ GY + + A+ +F MRE+GV +
Sbjct: 205 YSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 68 HIGVLTACSLGGLVEKGKK 86
VL+A ++ G ++ G+
Sbjct: 265 ITSVLSAFTVSGDIDNGRS 283
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y ++ ++ AN IF+ + +D +W +++ + G+ D + LFE M G+
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM 91
V+ VL C + +G++ M
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYM 389
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + G I A ++FD + K+ +W T+I GYG+ G+ A+N+F M G+ P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
V+ + VL ACS GLV++G + F+ M R +P+ HYACMV +L
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y++ I+ A K+FD P K SW +I GY G + AI+LF M++ PV+
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQARNVKPT 99
+L+AC+ G + GK D +++ + + +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGY 40
+ Y + R++ A K+FDR+P KD+ W T+I GY
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV 61
+ Y++ G+I + + +F D ++ +I GY GE +++++LF+ + G
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
>sp|Q9ZUT4|PP192_ARATH Pentatricopeptide repeat-containing protein At2g37320
OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1
Length = 500
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMR-EDGVEYY 64
+ Y + G + A +IFD+ KD SW ++I GY G AI LFE M + G +
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY 113
++++GVL++C GLV++G+KFF+ M +KP HY+C+V LL ++
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67
Y +G ++ A K+F+ +P ++ SW +I G+ +D+ + L+ MR+ + +
Sbjct: 164 LYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYT 223
Query: 68 HIGVLTACSLGGLVEKGKK 86
+L+AC+ G + +G+
Sbjct: 224 FTALLSACTGSGALGQGRS 242
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I++A + FD++ K+ SW +I Y + G D A+ LF+ M++ G
Sbjct: 490 VDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNA 549
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115
V+++ L+AC+ GGLV+KG F M + KP+ HY+C+V +L + +
Sbjct: 550 VTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGE 599
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D YT +D A + D + KD S T+I G G D AI++F MR+
Sbjct: 391 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NA 447
Query: 66 VSHIGVLTACSLGGLVEKGK 85
++ I +L ACS+ + K
Sbjct: 448 ITVISLLNACSVSADLRTSK 467
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ +D A ++FD ++ SW +++ G+ D A+ +F M ++ VE
Sbjct: 290 IDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 349
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDE 90
V+ + +L C KFF++
Sbjct: 350 VTVVSLLRVC----------KFFEQ 364
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 18 ANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM-REDGVEYYPVSHIGVLTACS 76
A K+FD + +D SW +I Y E V + LF+ M E E V+ VL AC+
Sbjct: 199 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 258
Query: 77 LGGLVEKGKK 86
+ ++ G+
Sbjct: 259 VMEDIDVGRS 268
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV 66
DFY + G + + FD + +DS SW ++ G G + + F +R G E
Sbjct: 90 DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS 149
Query: 67 SHIGVLTAC 75
+ + V+ AC
Sbjct: 150 TLVLVIHAC 158
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y + G I+ A ++F R KD SW ++I GY G+ A+++F+ M++ V+
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVK--PTETHYACMVYLLIKYNQ 115
V+ IGV AC+ GLVE+G+K+FD M R+ K PT+ H +CMV L + Q
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIM-VRDCKIAPTKEHNSCMVDLYSRAGQ 647
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y + G+++ A K+F + KD +W ++ GY GE + AI +F + + G++
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Query: 66 VSHIGVLTAC-SLGGLVEKGKKF 87
+ +L C + + +GK+F
Sbjct: 495 FTFSSILNVCAATNASMGQGKQF 517
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVE--- 62
+D Y + K+FD + ++ +W TLI GY D + LF M+ +G +
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 63 YYPVSHIGVLTACSLGG 79
+ + +GVL +GG
Sbjct: 195 FTFAAALGVLAEEGVGG 211
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDV-AINLFEAMREDGVEYY 64
++ Y + G + A +FD+ VK +W ++I GY G LD+ A+ +F +MR + V
Sbjct: 236 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG-LDLEALGMFYSMRLNYVRLS 294
Query: 65 PVSHIGVLTACS 76
S V+ C+
Sbjct: 295 ESSFASVIKLCA 306
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 35/120 (29%)
Query: 12 TGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVE--------- 62
+ R+ A+ +FD+ P +D S+I+L+ G+ G A LF + G+E
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 63 ----------------YYPVSHIGVLTACSLG-GLVEK---------GKKFFDEMQARNV 96
+ G L S+G LV+ G+K FDEM+ RNV
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y + G ID + K+F+ + K+ W ++I Y G+ + +NLF M ++ V
Sbjct: 516 LDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDL 575
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
V+ + VLTAC+ G+V+KG + F+ M + N++P+ HY+CMV +L
Sbjct: 576 VTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDML 621
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDV-AINLFEAMREDGVEYY 64
+ Y+R+G A ++FD + KD SW +L+ G G A+ +F M +GVE
Sbjct: 216 ITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
Query: 65 PVSHIGVLTAC 75
VS V+T C
Sbjct: 276 HVSFTSVITTC 286
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y++ G ++ +F ++ ++ SW T+I D A+++F MR DGV V+
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 69 IGVLTACSLGGLVEKGKK 86
+G++ A +++G K
Sbjct: 376 VGLINAVKCNEQIKEGLK 393
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + GR D A IF+ L D SW T++ G+ + +A+N M+ GV +
Sbjct: 118 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDA 174
Query: 66 VSHIGVLTAC 75
++ L+ C
Sbjct: 175 FTYSTALSFC 184
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + ++ K+FD++P K+ +W +I+ YGM G AI+L M GV+
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
V+ I V ACS G+V++G + F M+ V+P+ HYAC+V LL
Sbjct: 619 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + G K+FDR+ ++ SW +LI + ++A+ F M ++ VE
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 66 VSHIGVLTACS 76
+ + V+TACS
Sbjct: 200 FTLVSVVTACS 210
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE------- 58
+D Y+R G+ID+A +IF ++ +D +W T+I GY + A+ L M+
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 59 --DGVEYYP--VSHIGVLTACSLGGLVEKGKKF 87
V P ++ + +L +C+ + KGK+
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I A ++F+ +P +++ SW LI + G+ + AI F M E G++
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQA-RNVKPTETHYACMVYLL 110
VS +GVLTACS G VE+G ++F M + P + HYACM+ LL
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y R+DLA +F+ +P KDS ++ TLI GY G +I+LF MR+ G +
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 66 VSHIGVLTA 74
+ GVL A
Sbjct: 251 FTFSGVLKA 259
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 11 RTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV 66
R G++ A K++D +P K++ S T+I G+ G++ A +LF+AM + V + +
Sbjct: 60 RRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + + A IF LP + + SW LI GY G + LF MR +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 66 VSHIGVLTACSLGGLVEKGKKF 87
+ VL A + + GK+
Sbjct: 453 STFATVLKASASFASLLLGKQL 474
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMR 57
LDFY++ R+ +FD +P D S+ +I Y + + +++ F M+
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP--V 66
+ +TG + A +FD +P + +W L+ Y D A LF M P V
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 67 SHIGVLTACS 76
+ +L C+
Sbjct: 149 TFTTLLPGCN 158
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 18 ANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV 66
A K+F ++D+A+++++ Y GE + ++ +AMRE G++ P
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPA 692
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y++ G +D AN++F+ + D +W I G+ G A+ LFE M G++
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMV 107
V+ I VLTACS GLVE+GK D M + NV PT HY CM+
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 4 PRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE----- 58
P +DFY + + A + F + + SW +I GY + + + A+ F+++R
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384
Query: 59 -DGVEYYPV-SHIGVLTACSLGGLV 81
+ Y + VL C++GG V
Sbjct: 385 LNSFTYTSIFQACSVLADCNIGGQV 409
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + G + A ++FD++ VK + L++GY G A+ LF + +GVE+
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDS 285
Query: 66 VSHIGVLTACS 76
VL AC+
Sbjct: 286 FVFSVVLKACA 296
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
L Y ++ A+K+FD + ++ S T+I Y G LD A+ LF M G
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y + G + A+K FD +D W ++I Y GE A+ + E M +G+E
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110
++ +GVL+ACS GLVE G K F+ M ++P HY CMV LL
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL 701
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+DFY + G ID A +FD LP K + +W T+I G +G V++ LF + ED V P
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV--VP 247
Query: 66 VSHI--GVLTACSLGGLVEKGKK 86
+I VL+ACS+ +E GK+
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQ 270
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + GR+ A+K+F+ +P K+ SW TL+ GY A+ LF +M + G++
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 66 VSHIGVLTACS 76
+ +LT+C+
Sbjct: 351 YACSSILTSCA 361
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILG---YGMLGELDVAINLFEAMREDGVE 62
++ Y+R G + A K+F+++P ++ SW T++ +G+ E V F R+D
Sbjct: 86 INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPN 145
Query: 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP 98
Y +S + ACS GL +G+ ++Q+ VK
Sbjct: 146 EYILS--SFIQACS--GLDGRGRWMVFQLQSFLVKS 177
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLF---EAMREDGVE 62
+D Y+ + + +FD + VKD W ++ GY E + A+NLF + RE E
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDE 555
Query: 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVK 97
+ + ++TA V+ G++F ++ R ++
Sbjct: 556 F---TFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLG---ELDVAINLFEAMR 57
+D Y + + A K+FD D + +I GY LG EL A+N+F MR
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 2 IEPRLDFYT-------RTGRIDLANKIFDRLPVKDSA-SWITLILGYGMLGELDVA 49
IEP + Y R GR++ A ++ +++P K +A W +L+ G G +++A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I+ A ++F + +D+ASW +LI G M G A++L+ M GV
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIK 112
++ + VLTAC+ GG V +G+K F M R NV+P H +C++ LL +
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y TGRID A +F+R PVKD W ++ GY D A+ LF M+ G+
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 69 IGVLTACSLGGLVEKGK 85
+ +LT C+ G +E+GK
Sbjct: 283 VSLLTGCAQTGALEQGK 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM-REDGVEYY 64
+ Y G+I++ +K+FD +P +D SW LI Y G + AI +F+ M +E +++
Sbjct: 88 MGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 65 PVSHIGVLTACSLGGLVEKGKKFF 88
+ + L+ACS +E G++ +
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIY 171
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y R G I +A +FD +P ++ SW ++I +G+ G + A++ F M+ V
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
V+ + +L+ACS G V++G K F+ M + V P E HYACMV LL
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 IEPRL-DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
+ P L + Y + G ++ A K+FD +PV++S W L+ GY + LF MR+ G
Sbjct: 146 VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG 205
Query: 61 VEYYPVSHIGVLTAC 75
+ ++ I ++ AC
Sbjct: 206 LALDALTLICLVKAC 220
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + +D A K+F+ ++ W TLI G+ A +LF M + +
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
+ +L +CS G + GK
Sbjct: 313 CTLAAILVSCSSLGSLRHGKS 333
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 9 YTRTGRIDLANKIFDRLPV--KDSASWITLILGYGMLGEL---DVAINLFEAMRE--DGV 61
Y ++ R+D A F+R+P ++ SW T++ GY DV + L+ MR DGV
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL-LYNRMRRHCDGV 107
Query: 62 EYYPVSHIGVLTACSLGGLVEKG 84
+ + + + + AC GL+E G
Sbjct: 108 DSFNL--VFAIKACVGLGLLENG 128
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ G I A KIFDR+ V D SW +I+G+ + G A++LFE M+ GV+
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
V+ + VLTACS GLV++ +F+ M + + HYA + LL
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y ++ RI+ + ++F RL +D SW +L+ GY G + A+ LF M V+
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 66 VSHIGVLTACSLGGLVEKGKKF 87
V+ V+ AC+ + GK+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQL 365
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 15 IDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM 56
ID ++F+ +P KD S+ T+I GY G + A+ + M
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I+ A+++F+ + K +SW +I G+ M G D + +LF MR+ G++
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLL 110
++ +G+L+ACS G+++ G+ F M Q + P HY CM+ LL
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y G I+ A K+FD +PVKD SW +I GY G A+ LF+ M + V +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 69 IGVLTACSLGGLVEKGKK 86
+ V++AC+ G +E G++
Sbjct: 270 VTVVSACAQSGSIELGRQ 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ +D Y++ G ++ A +F+RLP KD SW TLI GY + A+ LF+ M G
Sbjct: 303 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGK 85
V+ + +L AC+ G ++ G+
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGR 387
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + GR++ A+K+FD+ P +D S+ LI GY G ++ A LF+ + V
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV---- 231
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101
VS +++ + G ++ + F +M NV+P E+
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ LD Y++ G A +IF+ +P KD SW +I YG G+ A+ F+ M++ G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
++ V+ + VL+AC GL+++G KFF +M+++ ++P HY+CM+ +L
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 20 KIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79
++FD +P +D ASW T+I + GE + A+ LF M G E VS ++ACS
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 80 LVEKGKK 86
+E+GK+
Sbjct: 223 WLERGKE 229
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G +LA +F + + SW +I Y +G A+ +++ M GV+
Sbjct: 351 IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDV 410
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
V+ VL ACS +EKGK+
Sbjct: 411 VTFTSVLPACSQLAALEKGKQ 431
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + +++A ++F ++P K +W ++I GY G+ + + M +G
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYAC 105
+ +L ACS + G KF R+V + + C
Sbjct: 310 TTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNC 348
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y ++G I A KIFDRL +D SW +L+ Y G A+ FE MR G+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110
+S + VLTACS GL+++G +++ M+ + P HY +V LL
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD YTR G +D A +FD L ++ SW LI G+ + A+ LF+ M DG
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 66 VSHIGVLTACSLGGLVEKGK 85
S+ + ACS G +E+GK
Sbjct: 263 FSYASLFGACSSTGFLEQGK 282
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM 56
L+ Y + G ++ A K+F+++P +D +W TLI GY A+ F M
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
>sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protein At4g16470
OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2
Length = 501
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + +++FD+L ++ +W +LI GYG G++ + FE M+E+G P
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMV 107
V+ + VLTAC+ GGLV+KG + F M+ ++P HYA MV
Sbjct: 311 VTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y +G + A +F L ++D W +I GY G + ++ MR++ +
Sbjct: 150 LILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQ 209
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPT 99
+ V ACS +E GK+ M R +K
Sbjct: 210 YTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN 243
>sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protein At2g02750
OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2
Length = 613
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 6 LDFYTRTGRIDLANKIFDRL--PVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY 63
+D Y + G A +IFDR KD W +I GYG GE + AI +FE +RE+ VE
Sbjct: 410 IDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEP 469
Query: 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
+ VL+ACS G VEKG + F MQ KP+ H CM+ LL
Sbjct: 470 SLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLL 517
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLP-VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64
+D Y++ A +F L ++ SW ++I G + G+ + A+ LFE + +G++
Sbjct: 273 IDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPD 332
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110
+ +++ S G V + KFF+ M + + P+ C+ LL
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPS---LKCLTSLL 375
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y++ G ++ A + FD + KD SW LI GYG G+ D+A+ ++ G+E
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLLIK 112
V + VL++CS G+V++G K F M + V+P H AC+V LL +
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY- 64
+ Y + G +D + IF+R+ +D SW +I GY +L A+ LFE M+ V+
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
Query: 65 PVSHIGVLTACSLGGLVEKGK 85
+ + +L ACS G + GK
Sbjct: 448 SFTVVSLLQACSSAGALPVGK 468
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ L+ Y + + A +FD++ +D SW T+I GY +G + + L MR DG
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG 240
Query: 61 V 61
+
Sbjct: 241 L 241
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I A +FD + K+ +W +L+ GYGM G + A+ +F+ MR G +
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDG 579
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
V+ + VL ACS G++++G ++F+ M+ V P HYAC+V LL
Sbjct: 580 VTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G +D AN +F + VKD SW ++ GY +G + A+ LFE M+E+ ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE 100
V+ ++ + GL + +M + +KP E
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM-REDGVEYYPVS 67
Y+R + A K+FD + V D SW ++I Y LG+ VA+ +F M E G ++
Sbjct: 172 YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT 231
Query: 68 HIGVLTACSLGGLVEKGKKF 87
+ VL C+ G GK+
Sbjct: 232 LVNVLPPCASLGTHSLGKQL 251
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVK--DSASWITLILGYGMLGELDVAINLFEAMRE 58
+I +D Y + ++D A +FD L K D +W +I GY G+ + A+ L M E
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 59 DGVEYYPVSHI--GVLTACSLGGLVEKGKK 86
+ + P + L AC+ + GK+
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQ 498
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH 68
Y++ G ++ N +F R P KD SW +I G G+ D A+ LFE M +G+E V+
Sbjct: 468 YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 69 IGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIKYNQ 115
+ +++ACS G VE+G +F+ M + + P HYACMV LL + Q
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y++ ++ A K+FD ++S +W ++ GY GE A+ LF M G++
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 66 VSHIGVLTACSLGGLVEKGKKF 87
+ +GVL ACS +E+GK+
Sbjct: 323 YTIVGVLNACSDICYLEEGKQL 344
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + A K FD L +D A W +LI GY + + A+ L+ M+ G+
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
+ VL ACS +E GK+
Sbjct: 424 PTMASVLKACSSLATLELGKQ 444
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE 58
++FY + G++ A+ IF+ + KD SW +LI GY G + + + + RE
Sbjct: 56 VNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE 108
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAI---NLFEAMREDG 60
Y + G ++ K+F +P +++ +W T++ GY G ++ AI NLF +E+G
Sbjct: 163 YCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG 217
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPV-KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64
+ Y + G I A++ FD + +D+ SW ++I+ G + A+ LFE M +G+
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFDEMQ-ARNVKPTETHYACMVYLL 110
++++GV +AC+ GLV +G+++FD M+ + PT +HYACMV L
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y++ G +D + FD+LP +DS SW T+I+GY +G+ AI + M ++G+E
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
+ VL + + +E GKK
Sbjct: 147 FTLTNVLASVAATRCMETGKK 167
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE 58
L+ Y + G +A +FDR+ V+D +SW +I + +G++D+A+ FE M E
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAM 56
LD Y + G ++ A IF L +D +W +I+GY G AINLF +M
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV---EYY 64
+ + G++DLA F+++ +D +W ++I G+ G A+++F M D + + +
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 65 PVSHIGVLTACS 76
++ VL+AC+
Sbjct: 281 TLA--SVLSACA 290
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKD--SASWITLILGYGMLGELDVAINLFEAMREDGVEY 63
+ Y+R G ++ A ++ ++ KD + L+ GY LG+++ A N+F ++++ V
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACM 106
+ +G S G + F M +P A M
Sbjct: 381 WTAMIVGYEQHGSYGEAI----NLFRSMVGGGQRPNSYTLAAM 419
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + G ID + ++F+ + V+D+ SW ++ Y G I LF+ M + G++
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLLIK 112
V+ GV++ACS GLVEKG+++F M + + P+ HY+CM+ L +
Sbjct: 473 VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV--EY 63
+D Y + + A +FDR+ K+ SW +++GYG G + A+ +F M+ G+ ++
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 64 YPVSHIGVLTACSLGGLVEKGKKF 87
Y + ++AC+ +E+G +F
Sbjct: 372 YTLGQ--AISACANVSSLEEGSQF 393
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRED-GVEYYPVS 67
Y++ G I F++LP +D +W LI GY + G + A+ + M D V+
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 68 HIGVLTACSLGGLVEKGKKFFDEM 91
+ +L S G V GK+ ++
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQV 165
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 EPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVE 62
P L Y G I A K+F L +++ + +L+ G G ++ A+ LF M +D V
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237
Query: 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVK 97
+ ++ + GL ++ + F EM+ + +K
Sbjct: 238 W-----AAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 18 ANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE-DGVEYYPVSHIGVLTACS 76
A ++FDR+P + SW L+L Y G + + FE + + DGV + ++ S
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNV-----LIEGYS 114
Query: 77 LGGLVEKGKKFFDEM 91
L GLV K ++ M
Sbjct: 115 LSGLVGAAVKAYNTM 129
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 13 GRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV--EYYPVSHIG 70
G I+ A ++F + KDS SW +I G G AI F M+ G+ + YP
Sbjct: 219 GMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG--S 275
Query: 71 VLTACSLGGLVEKGKK 86
VL AC G + +GK+
Sbjct: 276 VLPACGGLGAINEGKQ 291
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D + + G +D A IF+++ KD+ +W +I+ Y G+ + ++ +FE MR + V+
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
++ +G+L ACS G VE+G+K+F +M ++ + P+ HY MV LL
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ YT +D A +FDR+ + +I GY + A++LF M+ ++
Sbjct: 171 INMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 66 VSHIGVLTACSLGGLVEKGK 85
++ + VL++C+L G ++ GK
Sbjct: 231 ITLLSVLSSCALLGSLDLGK 250
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G I+ + K F + K SW T++ Y G A++LF +M+E+ ++
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTET-HYACMVYLLIK 112
VS + VL+AC GLVE+GK+ F+EM R+ E HYACMV LL K
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGK 753
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y + GR A K F+RLP+KD+ ++ L GY +G+ + A ++++ M+ GV
Sbjct: 443 ISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYA 104
+ +G+L C+ +G + ++ ++ +E H A
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVA 540
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y++ G +++A ++F + +D SW +I Y G+ D AI+LF M ++
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 66 VSHIGVLTACS 76
V+ VL C+
Sbjct: 402 VTLTSVLQGCA 412
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + + A ++FD++ VKD +W T++ G G A+ LF MR V+
Sbjct: 142 VEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDH 201
Query: 66 VSHIGVLTACS 76
VS ++ A S
Sbjct: 202 VSLYNLIPAVS 212
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMR 57
+D Y + A +F+ + KD +SW T++ Y G + + LF+ MR
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRED-GVEYY 64
++ Y+ R DL+ IFD + W ++I GY G A+ F M E+ G++
Sbjct: 40 INAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPD 99
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFD 89
S L AC+ +KG + D
Sbjct: 100 KYSFTFALKACAGSMDFKKGLRIHD 124
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+ Y++ G ID A+++F+ + ++ SW ++I G+ G + F M E+GV+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLLIK 112
V+++ +L+ACS GLV +G + F+ M + +KP HYACMV LL +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 6 LDFYTRT---GRIDLANKIFDRLPVKDSASWITLILGYGMLGELDV-AINLFEAMREDG- 60
+D Y + G +D K+FDR+ SW LI GY L AINLF M G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115
VE + AC GK+ + R + + ++ + +K ++
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 6 LDFYTRTGRIDLANKIFD---RLPVKDSASWITLILGYGMLG-ELDVAINLFEAMREDGV 61
+ Y+++G A +F+ R +D SW ++ YG G ELD AI +F E G+
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD-AIKVFVEFLELGL 162
Query: 62 EYYPVSHIGVLTACSLGGLVEKGK 85
+ V+ ACS V G+
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGR 186
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y + G + + +F+ + KD SW ++I GYGM G + A+++F+ M G
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
++ + VL+ACS GLVEKG++ F M R ++P + HYAC+V LL
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLL 581
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ L Y + GR+ A +F +PV++ SW +I G+ + + A+ +FE M+ +
Sbjct: 195 VVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREE 254
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQ 92
+ V+ VL+ S G E K+F M+
Sbjct: 255 FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE----DGV 61
+ Y + G++ A +F ++ K SW +LI + G+LD A++LF + E V
Sbjct: 336 IHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 62 EYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMV 107
+ V+ V+ C++ G + ++F +MQ V C++
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
>sp|Q9CA73|PP119_ARATH Putative pentatricopeptide repeat-containing protein At1g74400
OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1
Length = 462
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMR-----EDG 60
L+ Y ++G + A K+FD KD ++ ++I GY + G+ ++ LF+ M+ +D
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 61 V-EYYPVSHIGVLTACSLGGLVEKGKKFFDEM-QARNVKPTETHYACMVYLLIK 112
V V+ IGVL ACS GLVE+GK+ F M N+KP E H+ CMV L +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 8 FYTRTGRIDLANKIFDRLPVKDS-ASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV 66
FY+ G +D A ++FD P K + W +I Y AI LF+ M + +E V
Sbjct: 109 FYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGV 168
Query: 67 SHIGVLTACSLGGLVEKGKKFFDEMQARNVK 97
L+AC+ G V+ G +E+ +R++K
Sbjct: 169 IVTVALSACADLGAVQMG----EEIYSRSIK 195
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVK-DSASWITLILGYGMLGEL----DVAINLFEAMREDG 60
+D + R+G + A++ +++P+K ++ W TL+ + G + +V +FE R+
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 61 VEYYPVSHI 69
+Y +S+I
Sbjct: 379 GDYVALSNI 387
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSA-SWITLILGYGMLGELDVAINLFEAMREDGVEYY 64
+D Y++ G +D A ++F++ K S +W T+I G+ + GE A+ +F+ + ++G++
Sbjct: 248 IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPD 307
Query: 65 PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK 112
VS++ LTAC GLVE G F+ M + V+ HY C+V LL +
Sbjct: 308 DVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSR 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
LD Y++ G + A K+FD +PV+D ASW LI G A+ L++ M +G+
Sbjct: 151 LDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE 210
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNV 96
V+ + L ACS G V++G+ F NV
Sbjct: 211 VTVVAALGACSHLGDVKEGENIFHGYSNDNV 241
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60
++ +D Y + G ++ + ++FD + KD ASW ++ Y + G ++ INLFE M E G
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 61 VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR-NVKPTETHYACMVYLL 110
V ++ + +L+ CS GL E G F+ M+ V P HYAC+V +L
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDIL 484
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y +G D A K+FD + ++ +W +LI + NLF M+E+ + +
Sbjct: 278 LKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW 337
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP 98
+ +L ACS + GK+ ++ KP
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
++ Y +TG + A K F+ L KD+ +W +I+G G + A+++F+ M+E G P
Sbjct: 359 VNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG-NATP 417
Query: 66 --VSHIGVLTACSLGGLVEKGKKFFDEMQ-ARNVKPTETHYACMVYLL 110
++++GVL ACS GLVE+G+++F EM+ ++PT HY CMV +L
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDIL 465
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
+D Y + G + A +FD +P + SW ++I GY G+ + A+ +F M + G+
Sbjct: 258 IDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 66 VSHIGVLTACSLGGLVEKGKK 86
V+ + V+ A + G + G+
Sbjct: 318 VTFLSVIRASMIQGCSQLGQS 338
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65
L Y G ++ ++F+ +P + +W +LI G+ AI F M+ +GV+
Sbjct: 149 LHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANE 208
Query: 66 VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP 98
+ +L AC + GK F +Q P
Sbjct: 209 TIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,415,058
Number of Sequences: 539616
Number of extensions: 1770085
Number of successful extensions: 5593
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 3826
Number of HSP's gapped (non-prelim): 1517
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)