Query 046694
Match_columns 118
No_of_seqs 136 out of 1268
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 05:35:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 1.2E-30 4E-35 182.7 12.0 117 1-117 63-192 (501)
2 4g26_A Pentatricopeptide repea 100.0 5.3E-29 1.8E-33 174.3 12.3 114 1-114 107-224 (501)
3 3spa_A Mtrpol, DNA-directed RN 100.0 9E-30 3.1E-34 186.8 8.1 114 1-114 129-250 (1134)
4 3spa_A Mtrpol, DNA-directed RN 99.9 2.2E-22 7.6E-27 148.2 9.7 88 29-116 126-216 (1134)
5 2xpi_A Anaphase-promoting comp 99.6 5.5E-14 1.9E-18 98.7 11.7 114 2-116 410-532 (597)
6 2xpi_A Anaphase-promoting comp 99.6 4.9E-14 1.7E-18 99.0 11.0 114 2-117 376-492 (597)
7 2fo7_A Synthetic consensus TPR 99.2 5.6E-10 1.9E-14 63.5 11.7 114 2-117 4-120 (136)
8 1w3b_A UDP-N-acetylglucosamine 99.1 8.4E-10 2.9E-14 74.0 11.6 114 2-117 240-356 (388)
9 3mkr_A Coatomer subunit epsilo 99.0 1.2E-08 4E-13 66.9 12.8 105 7-116 109-216 (291)
10 2ho1_A Type 4 fimbrial biogene 99.0 1.1E-08 3.6E-13 64.6 11.9 85 7-91 79-167 (252)
11 1na0_A Designed protein CTPR3; 99.0 3.8E-08 1.3E-12 55.2 13.1 110 2-113 12-124 (125)
12 1b89_A Protein (clathrin heavy 99.0 3.3E-10 1.1E-14 78.2 5.1 97 2-116 97-193 (449)
13 2vq2_A PILW, putative fimbrial 99.0 2.2E-08 7.6E-13 61.7 12.8 110 5-115 48-162 (225)
14 3as5_A MAMA; tetratricopeptide 99.0 1.8E-08 6E-13 60.2 12.0 109 5-115 14-125 (186)
15 2vq2_A PILW, putative fimbrial 99.0 2E-08 6.7E-13 61.9 12.4 115 2-117 11-130 (225)
16 3as5_A MAMA; tetratricopeptide 99.0 3.7E-08 1.3E-12 58.8 13.0 114 2-117 45-161 (186)
17 1w3b_A UDP-N-acetylglucosamine 99.0 9.5E-09 3.2E-13 68.9 11.3 109 7-117 211-322 (388)
18 2ho1_A Type 4 fimbrial biogene 99.0 1.4E-08 4.7E-13 64.1 10.7 115 2-117 40-158 (252)
19 2y4t_A DNAJ homolog subfamily 99.0 1.4E-08 4.8E-13 68.9 11.3 111 3-116 215-345 (450)
20 3cv0_A Peroxisome targeting si 98.9 2E-08 6.8E-13 65.2 11.4 115 2-117 175-303 (327)
21 1fch_A Peroxisomal targeting s 98.9 1.4E-08 5E-13 67.1 10.9 116 2-118 220-348 (368)
22 3mkr_A Coatomer subunit epsilo 98.9 1.9E-08 6.6E-13 65.8 11.0 105 6-116 41-146 (291)
23 2y4t_A DNAJ homolog subfamily 98.9 1.1E-08 3.7E-13 69.5 10.1 112 2-117 180-312 (450)
24 2vyi_A SGTA protein; chaperone 98.9 1.4E-07 4.8E-12 53.2 13.2 114 2-117 15-131 (131)
25 2q7f_A YRRB protein; TPR, prot 98.9 5.9E-08 2E-12 60.6 12.0 110 5-116 97-209 (243)
26 1hh8_A P67PHOX, NCF-2, neutrop 98.9 2.4E-07 8.1E-12 57.1 14.1 113 4-117 11-138 (213)
27 2q7f_A YRRB protein; TPR, prot 98.9 9.5E-08 3.2E-12 59.6 12.4 114 2-117 60-176 (243)
28 2pl2_A Hypothetical conserved 98.9 4E-08 1.4E-12 61.5 10.4 69 44-116 98-167 (217)
29 4eqf_A PEX5-related protein; a 98.9 2.1E-08 7E-13 66.6 9.3 112 4-117 182-298 (365)
30 2pl2_A Hypothetical conserved 98.8 4.3E-08 1.5E-12 61.3 10.0 114 2-118 76-203 (217)
31 1b89_A Protein (clathrin heavy 98.8 1E-08 3.5E-13 70.9 7.6 101 1-117 124-224 (449)
32 1elr_A TPR2A-domain of HOP; HO 98.8 1.2E-07 4.3E-12 53.5 10.9 113 2-116 7-128 (131)
33 2lni_A Stress-induced-phosphop 98.8 2.1E-07 7.1E-12 52.8 11.9 111 2-114 19-132 (133)
34 4eqf_A PEX5-related protein; a 98.8 4.4E-08 1.5E-12 65.0 10.2 115 2-117 216-344 (365)
35 2fo7_A Synthetic consensus TPR 98.8 1.6E-07 5.3E-12 53.1 10.9 92 2-94 38-132 (136)
36 1xnf_A Lipoprotein NLPI; TPR, 98.8 9.6E-08 3.3E-12 60.7 10.9 111 2-115 46-159 (275)
37 3hym_B Cell division cycle pro 98.8 1.2E-07 4E-12 61.6 10.6 111 5-116 165-286 (330)
38 3uq3_A Heat shock protein STI1 98.8 3E-07 1E-11 57.7 12.2 114 2-117 82-224 (258)
39 3hym_B Cell division cycle pro 98.8 1.3E-07 4.3E-12 61.5 10.6 114 3-117 129-253 (330)
40 4gco_A Protein STI-1; structur 98.8 5.6E-07 1.9E-11 51.8 12.1 102 3-107 17-122 (126)
41 1fch_A Peroxisomal targeting s 98.8 4.1E-07 1.4E-11 60.1 12.9 91 3-94 68-161 (368)
42 3vtx_A MAMA; tetratricopeptide 98.7 6.2E-07 2.1E-11 54.1 12.2 115 2-117 8-158 (184)
43 4gyw_A UDP-N-acetylglucosamine 98.7 3E-07 1E-11 67.2 12.4 112 2-116 12-127 (723)
44 2kck_A TPR repeat; tetratricop 98.7 7E-07 2.4E-11 49.0 11.4 94 2-96 9-108 (112)
45 3uq3_A Heat shock protein STI1 98.7 2.2E-07 7.4E-12 58.3 10.3 115 2-117 41-190 (258)
46 1a17_A Serine/threonine protei 98.7 9.4E-07 3.2E-11 52.0 11.8 113 2-116 16-133 (166)
47 3vtx_A MAMA; tetratricopeptide 98.7 1.2E-06 4.1E-11 52.8 12.3 94 6-102 80-176 (184)
48 4gyw_A UDP-N-acetylglucosamine 98.7 8.5E-07 2.9E-11 64.9 13.5 114 2-118 46-163 (723)
49 4ga2_A E3 SUMO-protein ligase 98.7 3.2E-07 1.1E-11 54.3 9.5 109 4-115 36-149 (150)
50 3gyz_A Chaperone protein IPGC; 98.7 4E-07 1.4E-11 54.3 9.9 92 3-95 40-134 (151)
51 3u4t_A TPR repeat-containing p 98.7 6.9E-07 2.4E-11 56.7 11.7 112 5-117 9-125 (272)
52 4ga2_A E3 SUMO-protein ligase 98.7 1.2E-06 4.2E-11 51.7 11.9 110 6-117 4-116 (150)
53 4gcn_A Protein STI-1; structur 98.7 7.6E-07 2.6E-11 51.2 10.7 103 2-106 11-122 (127)
54 3edt_B KLC 2, kinesin light ch 98.7 1.4E-07 4.7E-12 59.9 7.9 116 2-117 46-186 (283)
55 1elw_A TPR1-domain of HOP; HOP 98.7 3.1E-06 1E-10 46.7 12.6 104 2-107 7-113 (118)
56 2gw1_A Mitochondrial precursor 98.6 1E-06 3.5E-11 60.5 12.3 105 4-110 11-117 (514)
57 3nf1_A KLC 1, kinesin light ch 98.6 2.4E-07 8.1E-12 59.7 8.5 92 2-93 114-223 (311)
58 3upv_A Heat shock protein STI1 98.6 2.1E-06 7.3E-11 48.7 11.6 93 2-95 7-102 (126)
59 3edt_B KLC 2, kinesin light ch 98.6 2.4E-07 8.2E-12 58.7 8.1 92 2-93 88-197 (283)
60 3sz7_A HSC70 cochaperone (SGT) 98.6 4.2E-06 1.4E-10 49.7 13.0 110 2-112 14-127 (164)
61 3ieg_A DNAJ homolog subfamily 98.6 1.1E-06 3.9E-11 57.4 11.4 77 38-116 128-204 (359)
62 3nf1_A KLC 1, kinesin light ch 98.6 6.5E-07 2.2E-11 57.6 9.6 116 2-117 72-212 (311)
63 3q49_B STIP1 homology and U bo 98.6 4.4E-06 1.5E-10 47.8 12.2 110 2-112 12-128 (137)
64 2vgx_A Chaperone SYCD; alterna 98.6 5E-06 1.7E-10 49.0 12.6 91 3-94 25-118 (148)
65 3cv0_A Peroxisome targeting si 98.6 5.1E-07 1.7E-11 58.5 8.9 107 9-117 148-257 (327)
66 3fp2_A TPR repeat-containing p 98.5 7.7E-07 2.6E-11 61.6 9.9 112 4-117 281-395 (537)
67 2h6f_A Protein farnesyltransfe 98.5 2.7E-06 9.1E-11 57.9 12.1 114 2-117 100-217 (382)
68 2xcb_A PCRH, regulatory protei 98.5 2.5E-06 8.4E-11 49.7 10.5 90 4-94 23-115 (142)
69 1xnf_A Lipoprotein NLPI; TPR, 98.5 7.2E-07 2.5E-11 56.6 8.8 106 10-117 16-128 (275)
70 1ouv_A Conserved hypothetical 98.5 2.8E-06 9.5E-11 54.3 11.5 102 5-112 12-122 (273)
71 1p5q_A FKBP52, FK506-binding p 98.5 2.8E-06 9.7E-11 56.6 11.5 114 2-117 150-281 (336)
72 4abn_A Tetratricopeptide repea 98.5 6.6E-07 2.3E-11 62.2 8.7 69 8-78 111-183 (474)
73 4i17_A Hypothetical protein; T 98.5 6.5E-06 2.2E-10 51.2 12.4 112 3-116 11-133 (228)
74 2gw1_A Mitochondrial precursor 98.5 8.7E-07 3E-11 60.8 9.0 111 5-116 344-465 (514)
75 3ieg_A DNAJ homolog subfamily 98.5 3.5E-06 1.2E-10 55.0 11.5 86 6-92 10-98 (359)
76 3fp2_A TPR repeat-containing p 98.5 1.2E-06 4.1E-11 60.6 9.6 113 3-117 247-361 (537)
77 2ond_A Cleavage stimulation fa 98.5 2.1E-06 7.1E-11 56.2 10.2 73 44-117 183-258 (308)
78 2dba_A Smooth muscle cell asso 98.5 7.1E-06 2.4E-10 47.2 11.6 106 2-109 31-142 (148)
79 1hh8_A P67PHOX, NCF-2, neutrop 98.5 1.1E-05 3.9E-10 49.4 13.0 109 2-110 40-166 (213)
80 2xev_A YBGF; tetratricopeptide 98.5 1.5E-05 5.2E-10 45.0 12.4 90 4-95 7-106 (129)
81 2vsy_A XCC0866; transferase, g 98.5 5.1E-06 1.7E-10 58.6 12.2 114 2-117 26-145 (568)
82 2ond_A Cleavage stimulation fa 98.4 3.4E-06 1.2E-10 55.2 10.5 114 2-117 102-220 (308)
83 2fbn_A 70 kDa peptidylprolyl i 98.4 1.1E-05 3.8E-10 49.3 12.0 112 3-116 42-172 (198)
84 2r5s_A Uncharacterized protein 98.4 7.8E-06 2.7E-10 49.2 11.1 54 64-117 107-161 (176)
85 4abn_A Tetratricopeptide repea 98.4 2.1E-06 7.3E-11 59.6 9.5 98 13-113 82-183 (474)
86 3urz_A Uncharacterized protein 98.4 6.1E-06 2.1E-10 51.1 10.5 106 7-114 12-136 (208)
87 2e2e_A Formate-dependent nitri 98.4 9.2E-06 3.2E-10 48.6 11.0 93 2-95 47-145 (177)
88 3u4t_A TPR repeat-containing p 98.4 6.6E-06 2.3E-10 52.1 10.6 104 2-107 40-149 (272)
89 1qqe_A Vesicular transport pro 98.4 2.3E-06 7.8E-11 55.7 8.6 116 2-117 80-216 (292)
90 1na0_A Designed protein CTPR3; 98.4 7.8E-06 2.7E-10 45.4 9.8 86 30-117 9-94 (125)
91 1ouv_A Conserved hypothetical 98.4 2E-05 6.8E-10 50.3 12.7 102 5-112 44-158 (273)
92 4i17_A Hypothetical protein; T 98.4 1.8E-05 6.2E-10 49.2 12.1 110 4-116 47-169 (228)
93 1hxi_A PEX5, peroxisome target 98.4 6.5E-06 2.2E-10 46.9 9.0 89 5-94 23-114 (121)
94 2h6f_A Protein farnesyltransfe 98.4 4.8E-06 1.7E-10 56.6 9.7 112 2-115 134-250 (382)
95 1wao_1 Serine/threonine protei 98.3 7.3E-06 2.5E-10 57.2 9.4 111 6-118 13-128 (477)
96 3rkv_A Putative peptidylprolyl 98.3 2.5E-05 8.6E-10 46.2 10.5 95 3-100 15-130 (162)
97 3u3w_A Transcriptional activat 98.3 2E-05 6.8E-10 51.1 10.6 113 5-117 81-213 (293)
98 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 2.4E-05 8.2E-10 54.2 11.3 113 2-116 271-401 (457)
99 3qou_A Protein YBBN; thioredox 98.2 3.5E-05 1.2E-09 50.1 11.2 111 6-117 124-272 (287)
100 3gw4_A Uncharacterized protein 98.2 1.4E-05 4.9E-10 48.4 8.9 108 10-117 3-124 (203)
101 3gw4_A Uncharacterized protein 98.2 5.4E-06 1.9E-10 50.3 6.5 116 2-117 29-164 (203)
102 1ihg_A Cyclophilin 40; ppiase 98.2 3E-05 1E-09 52.4 10.6 113 2-116 226-357 (370)
103 2ooe_A Cleavage stimulation fa 98.2 1.5E-05 5E-10 55.8 9.3 55 3-57 325-383 (530)
104 3ro3_A PINS homolog, G-protein 98.2 1.4E-05 4.9E-10 46.2 7.7 116 2-117 12-146 (164)
105 3k9i_A BH0479 protein; putativ 98.2 9E-06 3.1E-10 45.7 6.6 101 11-112 2-109 (117)
106 2qfc_A PLCR protein; TPR, HTH, 98.2 6.5E-05 2.2E-09 48.7 11.5 113 5-117 121-253 (293)
107 2e2e_A Formate-dependent nitri 98.2 5E-06 1.7E-10 49.8 5.8 106 10-117 21-132 (177)
108 3mv2_B Coatomer subunit epsilo 98.2 2.1E-05 7.2E-10 52.2 9.1 86 5-92 142-238 (310)
109 2vsy_A XCC0866; transferase, g 98.1 2.7E-05 9.1E-10 55.0 10.1 104 12-117 2-108 (568)
110 2c2l_A CHIP, carboxy terminus 98.1 4.7E-05 1.6E-09 49.4 10.6 90 3-93 8-100 (281)
111 3ulq_A Response regulator aspa 98.1 2.8E-05 9.5E-10 52.1 9.7 116 2-117 146-281 (383)
112 3qky_A Outer membrane assembly 98.1 7.2E-05 2.5E-09 47.5 11.1 91 5-95 21-127 (261)
113 3ulq_A Response regulator aspa 98.1 1.9E-05 6.3E-10 52.9 8.7 92 2-93 187-292 (383)
114 3gyz_A Chaperone protein IPGC; 98.1 4.1E-05 1.4E-09 45.5 9.4 87 29-117 35-121 (151)
115 4f3v_A ESX-1 secretion system 98.1 5.3E-05 1.8E-09 49.7 10.4 112 5-117 108-225 (282)
116 2pzi_A Probable serine/threoni 98.1 1.7E-05 5.8E-10 57.5 8.8 112 3-117 437-551 (681)
117 3mv2_B Coatomer subunit epsilo 98.1 6E-05 2.1E-09 50.0 10.7 110 4-117 105-228 (310)
118 3q49_B STIP1 homology and U bo 98.1 0.00011 3.7E-09 41.8 10.6 89 27-117 6-94 (137)
119 2kck_A TPR repeat; tetratricop 98.1 5.9E-05 2E-09 41.0 9.1 87 29-117 5-94 (112)
120 3sf4_A G-protein-signaling mod 98.1 7.8E-06 2.7E-10 54.4 6.3 116 2-117 190-324 (406)
121 3q15_A PSP28, response regulat 98.1 4.7E-05 1.6E-09 51.0 9.7 115 3-117 145-278 (378)
122 2lni_A Stress-induced-phosphop 98.1 8.3E-05 2.8E-09 41.7 9.5 87 29-117 15-101 (133)
123 1qqe_A Vesicular transport pro 98.1 1.6E-05 5.4E-10 51.7 7.2 115 3-117 41-175 (292)
124 2l6j_A TPR repeat-containing p 98.1 0.00021 7.3E-09 38.9 11.0 84 30-116 4-94 (111)
125 3u3w_A Transcriptional activat 98.1 0.00017 5.8E-09 46.7 12.0 112 4-115 120-251 (293)
126 2vgx_A Chaperone SYCD; alterna 98.1 8.1E-05 2.8E-09 43.7 9.5 87 29-117 20-106 (148)
127 4gco_A Protein STI-1; structur 98.1 0.00014 4.7E-09 41.6 10.2 86 30-117 13-98 (126)
128 3ro2_A PINS homolog, G-protein 98.0 1.3E-05 4.5E-10 51.6 6.4 116 2-117 186-320 (338)
129 1elw_A TPR1-domain of HOP; HOP 98.0 0.00011 3.9E-09 40.1 9.5 86 30-117 4-89 (118)
130 2hr2_A Hypothetical protein; a 98.0 0.00014 4.9E-09 43.7 10.3 106 4-109 16-151 (159)
131 1a17_A Serine/threonine protei 98.0 5.8E-05 2E-09 44.1 8.6 89 2-91 50-143 (166)
132 2xcb_A PCRH, regulatory protei 98.0 0.00011 3.7E-09 42.6 9.5 87 29-117 17-103 (142)
133 3sf4_A G-protein-signaling mod 98.0 4.5E-05 1.5E-09 50.7 8.7 115 2-116 230-363 (406)
134 2vyi_A SGTA protein; chaperone 98.0 0.00016 5.5E-09 40.2 9.8 87 29-117 11-97 (131)
135 4a1s_A PINS, partner of inscut 98.0 1.8E-05 6.2E-10 53.0 6.6 116 2-117 226-360 (411)
136 3qky_A Outer membrane assembly 98.0 8.2E-05 2.8E-09 47.2 9.3 109 4-114 57-199 (261)
137 2ifu_A Gamma-SNAP; membrane fu 98.0 1.7E-05 5.8E-10 51.9 6.2 89 3-92 80-182 (307)
138 2pzi_A Probable serine/threoni 98.0 6.8E-05 2.3E-09 54.4 9.8 107 10-118 402-519 (681)
139 3upv_A Heat shock protein STI1 98.0 0.00018 6.1E-09 40.5 9.8 86 30-117 4-89 (126)
140 3sz7_A HSC70 cochaperone (SGT) 98.0 0.00015 5E-09 42.9 9.8 87 29-117 10-96 (164)
141 2dba_A Smooth muscle cell asso 98.0 0.00024 8.3E-09 40.6 10.4 87 28-117 26-116 (148)
142 3q15_A PSP28, response regulat 97.9 8E-05 2.8E-09 49.8 8.9 93 2-94 185-290 (378)
143 3qou_A Protein YBBN; thioredox 97.9 7.7E-05 2.6E-09 48.4 8.5 77 15-93 102-179 (287)
144 2ooe_A Cleavage stimulation fa 97.9 0.0002 6.9E-09 50.0 11.1 115 2-117 359-480 (530)
145 1elr_A TPR2A-domain of HOP; HO 97.9 0.0002 6.9E-09 39.8 9.2 87 30-117 4-96 (131)
146 4f3v_A ESX-1 secretion system 97.9 0.00053 1.8E-08 44.9 12.1 99 6-106 142-247 (282)
147 4a1s_A PINS, partner of inscut 97.9 3.9E-05 1.3E-09 51.4 7.0 111 5-115 54-181 (411)
148 1p5q_A FKBP52, FK506-binding p 97.9 0.00013 4.3E-09 48.6 9.2 90 2-92 199-292 (336)
149 1na3_A Designed protein CTPR2; 97.9 0.00048 1.7E-08 36.1 10.6 84 29-114 8-91 (91)
150 4g1t_A Interferon-induced prot 97.9 0.00091 3.1E-08 45.6 13.1 111 2-114 54-186 (472)
151 3ma5_A Tetratricopeptide repea 97.9 0.00029 1E-08 38.4 8.9 86 29-115 6-92 (100)
152 3qwp_A SET and MYND domain-con 97.8 0.00015 5E-09 50.1 9.0 87 6-92 294-398 (429)
153 2kat_A Uncharacterized protein 97.8 0.00011 3.9E-09 40.8 7.2 96 18-114 4-103 (115)
154 2fbn_A 70 kDa peptidylprolyl i 97.8 6.3E-05 2.2E-09 45.9 6.5 111 6-117 11-139 (198)
155 3n71_A Histone lysine methyltr 97.8 0.00012 4.2E-09 51.4 8.2 85 8-92 318-420 (490)
156 3urz_A Uncharacterized protein 97.8 0.00026 8.8E-09 43.7 8.9 69 5-75 60-132 (208)
157 2ifu_A Gamma-SNAP; membrane fu 97.8 4.7E-05 1.6E-09 49.8 5.8 115 2-117 39-172 (307)
158 2qfc_A PLCR protein; TPR, HTH, 97.8 0.00012 4.2E-09 47.3 7.6 90 2-91 158-263 (293)
159 3ro2_A PINS homolog, G-protein 97.8 0.00012 4.1E-09 47.1 7.4 111 5-115 11-138 (338)
160 2l6j_A TPR repeat-containing p 97.8 0.00012 4.3E-09 39.9 6.6 85 2-88 7-101 (111)
161 1hxi_A PEX5, peroxisome target 97.8 0.00058 2E-08 38.6 9.5 85 31-117 18-102 (121)
162 3n71_A Histone lysine methyltr 97.8 6.6E-05 2.3E-09 52.7 6.4 93 1-93 353-463 (490)
163 1xi4_A Clathrin heavy chain; a 97.8 0.00049 1.7E-08 53.9 11.4 56 1-58 1107-1162(1630)
164 2xev_A YBGF; tetratricopeptide 97.7 0.00055 1.9E-08 38.3 9.0 82 35-117 7-93 (129)
165 3qww_A SET and MYND domain-con 97.7 0.00015 5E-09 50.2 7.3 82 12-93 311-410 (433)
166 3ro3_A PINS homolog, G-protein 97.7 0.00047 1.6E-08 39.6 8.6 92 2-93 52-157 (164)
167 4gcn_A Protein STI-1; structur 97.7 0.00048 1.7E-08 39.2 8.4 85 31-116 9-99 (127)
168 1hz4_A MALT regulatory protein 97.7 0.00068 2.3E-08 45.0 10.2 114 4-117 58-191 (373)
169 2yhc_A BAMD, UPF0169 lipoprote 97.7 0.00045 1.5E-08 43.0 8.6 52 7-58 12-69 (225)
170 3rjv_A Putative SEL1 repeat pr 97.7 0.0011 3.9E-08 40.9 10.3 105 4-112 23-137 (212)
171 1na3_A Designed protein CTPR2; 97.7 0.00074 2.5E-08 35.3 8.3 74 2-76 12-88 (91)
172 2if4_A ATFKBP42; FKBP-like, al 97.6 0.00021 7.1E-09 47.6 7.1 91 3-94 183-293 (338)
173 1xi4_A Clathrin heavy chain; a 97.6 0.0006 2E-08 53.5 10.2 97 11-117 1088-1184(1630)
174 2r5s_A Uncharacterized protein 97.6 0.0017 5.8E-08 38.7 10.6 65 29-93 107-172 (176)
175 2yhc_A BAMD, UPF0169 lipoprote 97.6 0.0018 6.2E-08 40.2 10.7 62 33-94 7-70 (225)
176 3k9i_A BH0479 protein; putativ 97.5 0.00091 3.1E-08 37.2 7.6 75 2-76 30-108 (117)
177 2c2l_A CHIP, carboxy terminus 97.5 0.0027 9.2E-08 41.0 10.7 87 29-117 3-89 (281)
178 3ma5_A Tetratricopeptide repea 97.5 0.00044 1.5E-08 37.7 6.0 58 2-59 10-70 (100)
179 2xm6_A Protein corresponding t 97.4 0.0087 3E-07 41.4 12.7 47 12-58 92-143 (490)
180 1hz4_A MALT regulatory protein 97.4 0.0023 7.7E-08 42.4 9.5 114 4-117 140-270 (373)
181 3rkv_A Putative peptidylprolyl 97.3 0.0021 7.1E-08 37.7 8.1 87 30-117 11-114 (162)
182 1wao_1 Serine/threonine protei 97.3 0.00053 1.8E-08 47.8 6.1 86 2-89 43-134 (477)
183 2kc7_A BFR218_protein; tetratr 97.3 0.0011 3.7E-08 35.5 5.9 53 7-59 8-64 (99)
184 2xm6_A Protein corresponding t 97.3 0.014 4.8E-07 40.3 12.7 81 12-95 128-217 (490)
185 3rjv_A Putative SEL1 repeat pr 97.3 0.0092 3.1E-07 36.8 10.7 106 5-113 56-175 (212)
186 1zu2_A Mitochondrial import re 97.2 0.00095 3.3E-08 40.1 5.2 100 10-113 13-137 (158)
187 1kt0_A FKBP51, 51 kDa FK506-bi 97.1 0.0021 7E-08 44.5 7.4 88 2-91 320-412 (457)
188 4e6h_A MRNA 3'-END-processing 97.1 0.0039 1.3E-07 45.5 9.0 110 5-116 384-520 (679)
189 4b4t_Q 26S proteasome regulato 97.1 0.0043 1.5E-07 41.7 8.8 115 3-117 59-192 (434)
190 2kat_A Uncharacterized protein 97.1 0.0023 7.9E-08 35.3 6.2 58 2-59 22-82 (115)
191 4g1t_A Interferon-induced prot 97.0 0.012 4E-07 40.0 10.5 105 14-118 315-448 (472)
192 2hr2_A Hypothetical protein; a 97.0 0.015 5.1E-07 34.9 9.4 86 32-117 13-119 (159)
193 2kc7_A BFR218_protein; tetratr 97.0 0.012 4.1E-07 31.2 8.2 59 36-95 6-65 (99)
194 1ihg_A Cyclophilin 40; ppiase 96.9 0.0065 2.2E-07 41.0 8.1 83 2-86 276-362 (370)
195 1v54_E Cytochrome C oxidase po 96.9 0.018 6.3E-07 31.9 8.4 70 40-110 19-89 (109)
196 4e6h_A MRNA 3'-END-processing 96.8 0.0083 2.8E-07 43.9 8.1 115 2-117 437-558 (679)
197 1wy6_A Hypothetical protein ST 96.7 0.033 1.1E-06 32.9 9.7 86 10-97 72-157 (172)
198 3qww_A SET and MYND domain-con 96.7 0.002 7E-08 44.6 4.5 58 1-58 342-410 (433)
199 2if4_A ATFKBP42; FKBP-like, al 96.7 0.011 3.8E-07 39.2 7.7 86 29-117 178-281 (338)
200 1klx_A Cysteine rich protein B 96.6 0.041 1.4E-06 31.6 10.0 84 10-96 36-128 (138)
201 2y69_E Cytochrome C oxidase su 96.4 0.051 1.7E-06 31.8 8.4 65 45-110 68-132 (152)
202 3qwp_A SET and MYND domain-con 96.4 0.0041 1.4E-07 42.9 4.3 58 1-58 331-399 (429)
203 2ff4_A Probable regulatory pro 96.3 0.05 1.7E-06 37.0 9.4 73 33-106 174-251 (388)
204 3mkq_A Coatomer beta'-subunit; 96.3 0.057 2E-06 39.3 10.0 81 9-91 662-762 (814)
205 3ly7_A Transcriptional activat 96.3 0.061 2.1E-06 36.6 9.4 74 28-105 275-348 (372)
206 3e4b_A ALGK; tetratricopeptide 96.2 0.099 3.4E-06 36.0 10.7 100 5-111 182-294 (452)
207 4b4t_Q 26S proteasome regulato 96.2 0.044 1.5E-06 36.8 8.8 90 3-92 139-243 (434)
208 3e4b_A ALGK; tetratricopeptide 96.0 0.19 6.4E-06 34.6 10.9 99 6-109 148-257 (452)
209 1klx_A Cysteine rich protein B 95.9 0.099 3.4E-06 29.9 8.5 93 12-112 8-105 (138)
210 3mkq_A Coatomer beta'-subunit; 95.7 0.087 3E-06 38.3 8.7 80 2-90 684-774 (814)
211 3u64_A Protein TP_0956; tetrat 95.6 0.28 9.5E-06 32.4 10.0 94 15-108 179-285 (301)
212 2ff4_A Probable regulatory pro 95.5 0.068 2.3E-06 36.4 7.3 68 4-71 176-251 (388)
213 2ion_A PDCD4, programmed cell 95.5 0.19 6.5E-06 29.8 8.6 89 3-91 13-110 (152)
214 2uy1_A Cleavage stimulation fa 95.2 0.3 1E-05 34.2 9.8 105 4-115 291-399 (493)
215 2v5f_A Prolyl 4-hydroxylase su 95.1 0.18 6E-06 27.4 9.4 62 33-94 8-75 (104)
216 2nsz_A Programmed cell death p 95.0 0.24 8.2E-06 28.5 10.0 89 3-91 11-108 (129)
217 1ug3_A EIF4GI, eukaryotic prot 94.7 0.39 1.3E-05 32.1 9.0 91 3-93 15-113 (339)
218 3bee_A Putative YFRE protein; 94.5 0.21 7.3E-06 26.7 6.2 65 29-95 5-73 (93)
219 2uwj_G Type III export protein 94.4 0.31 1.1E-05 27.0 7.3 60 7-69 47-106 (115)
220 4b4t_R RPN7, 26S proteasome re 94.4 0.69 2.4E-05 31.8 9.9 91 3-93 135-236 (429)
221 2p58_C Putative type III secre 94.2 0.35 1.2E-05 26.8 7.5 52 7-60 48-99 (116)
222 1zu2_A Mitochondrial import re 94.2 0.053 1.8E-06 32.4 3.5 71 15-93 62-146 (158)
223 3dra_A Protein farnesyltransfe 93.9 0.86 2.9E-05 30.0 11.8 101 13-115 124-235 (306)
224 1dce_A Protein (RAB geranylger 93.9 0.61 2.1E-05 33.3 9.0 106 8-115 116-241 (567)
225 1dce_A Protein (RAB geranylger 93.7 1.3 4.5E-05 31.7 11.3 96 15-112 89-190 (567)
226 2v5f_A Prolyl 4-hydroxylase su 93.7 0.42 1.4E-05 25.8 7.4 60 4-65 10-79 (104)
227 1pc2_A Mitochondria fission pr 93.5 0.66 2.2E-05 27.5 9.3 83 15-101 14-105 (152)
228 3eiq_C Programmed cell death p 93.4 0.86 3E-05 30.9 8.6 75 3-77 221-300 (358)
229 2zu6_B Programmed cell death p 93.1 1.1 3.7E-05 29.7 8.6 89 3-91 170-267 (307)
230 3ly7_A Transcriptional activat 93.1 0.53 1.8E-05 32.1 7.2 64 5-70 283-348 (372)
231 2nsz_A Programmed cell death p 92.8 0.78 2.7E-05 26.3 7.3 70 32-102 9-80 (129)
232 2fu4_A Ferric uptake regulatio 92.2 0.64 2.2E-05 24.0 7.1 63 54-117 6-69 (83)
233 2ion_A PDCD4, programmed cell 92.1 1.1 3.7E-05 26.5 7.3 70 32-102 11-82 (152)
234 3u64_A Protein TP_0956; tetrat 92.1 0.79 2.7E-05 30.3 6.8 70 2-71 202-283 (301)
235 3mkq_B Coatomer subunit alpha; 91.9 1.3 4.5E-05 26.9 9.1 50 7-58 13-62 (177)
236 3bee_A Putative YFRE protein; 91.8 0.82 2.8E-05 24.4 9.4 56 5-60 12-73 (93)
237 3mkq_B Coatomer subunit alpha; 91.3 1.6 5.4E-05 26.6 9.3 25 2-26 37-61 (177)
238 3dra_A Protein farnesyltransfe 91.1 2.2 7.7E-05 28.0 11.9 43 16-58 50-97 (306)
239 3q7a_A Farnesyltransferase alp 90.7 2.7 9.3E-05 28.3 10.7 99 14-114 140-256 (349)
240 1wy6_A Hypothetical protein ST 90.5 1.7 5.8E-05 25.7 7.3 58 5-62 97-157 (172)
241 2uy1_A Cleavage stimulation fa 89.5 2.4 8.3E-05 29.6 7.9 75 13-92 334-411 (493)
242 4fhn_B Nucleoporin NUP120; pro 89.3 6.4 0.00022 30.6 11.8 109 7-117 850-988 (1139)
243 1v54_E Cytochrome C oxidase po 88.9 1.9 6.4E-05 23.9 5.7 47 27-74 42-88 (109)
244 3q7a_A Farnesyltransferase alp 88.5 4.2 0.00014 27.4 12.2 105 8-114 63-173 (349)
245 4h7y_A Dual specificity protei 88.4 2.7 9.2E-05 25.1 7.4 97 4-101 18-130 (161)
246 3eyy_A Putative iron uptake re 87.8 2.4 8.2E-05 24.6 6.0 61 54-116 8-68 (145)
247 3eiq_C Programmed cell death p 86.3 4.7 0.00016 27.3 7.4 79 31-110 218-298 (358)
248 3l6a_A Eukaryotic translation 85.9 6.2 0.00021 26.7 9.9 77 3-79 16-97 (364)
249 3lvg_A Clathrin heavy chain 1; 85.7 0.061 2.1E-06 38.4 -2.0 78 2-83 57-134 (624)
250 2fe3_A Peroxide operon regulat 85.5 2.2 7.4E-05 24.8 4.9 62 54-116 11-72 (145)
251 2rg8_A Programmed cell death p 85.3 3.6 0.00012 24.6 5.9 26 3-28 14-39 (165)
252 1mzb_A Ferric uptake regulatio 85.1 3.7 0.00013 23.4 7.0 61 55-116 8-69 (136)
253 2zu6_B Programmed cell death p 84.9 6.5 0.00022 26.0 7.5 73 32-105 168-242 (307)
254 3ygs_P Procaspase 9; apoptosis 84.7 2.3 7.8E-05 23.0 4.5 37 14-50 52-88 (97)
255 2y69_E Cytochrome C oxidase su 84.3 4.5 0.00015 23.7 5.7 46 27-73 85-130 (152)
256 4gns_B Protein CSD3, chitin bi 84.1 9.1 0.00031 28.6 8.6 111 5-117 254-388 (754)
257 2w57_A Ferric uptake regulatio 84.1 4.5 0.00016 23.6 7.0 62 54-116 6-68 (150)
258 4ets_A Ferric uptake regulatio 83.9 4.9 0.00017 23.8 6.7 70 46-116 13-85 (162)
259 4b4t_R RPN7, 26S proteasome re 83.8 3.3 0.00011 28.5 6.0 61 32-92 133-195 (429)
260 3mwm_A ZUR, putative metal upt 83.3 3.2 0.00011 23.9 4.9 43 72-114 20-62 (139)
261 3l6a_A Eukaryotic translation 83.1 6.2 0.00021 26.7 6.9 79 31-109 13-92 (364)
262 2yru_A Steroid receptor RNA ac 82.5 3.4 0.00012 23.4 4.6 64 32-95 21-91 (118)
263 2fe3_A Peroxide operon regulat 82.4 5.3 0.00018 23.1 8.1 69 14-82 5-73 (145)
264 1zbp_A Hypothetical protein VP 82.0 5 0.00017 26.1 5.9 68 7-74 5-77 (273)
265 2xig_A Ferric uptake regulatio 82.0 4.7 0.00016 23.5 5.4 62 54-116 16-77 (150)
266 2o03_A Probable zinc uptake re 81.2 3.7 0.00013 23.3 4.6 46 36-81 16-61 (131)
267 1pc2_A Mitochondria fission pr 80.8 6.7 0.00023 23.2 7.2 71 45-117 13-88 (152)
268 3esl_A Checkpoint serine/threo 80.6 8 0.00027 24.0 10.9 58 43-100 92-150 (202)
269 1ug3_A EIF4GI, eukaryotic prot 80.6 2.6 8.8E-05 28.2 4.3 69 32-101 13-82 (339)
270 1nzn_A CGI-135 protein, fissio 80.4 6.1 0.00021 22.6 6.9 85 12-99 14-106 (126)
271 4ets_A Ferric uptake regulatio 80.4 3.1 0.00011 24.7 4.3 67 17-83 19-87 (162)
272 2p58_C Putative type III secre 79.9 5.9 0.0002 22.0 5.7 75 14-95 22-99 (116)
273 2xig_A Ferric uptake regulatio 79.4 7.2 0.00025 22.7 7.8 66 17-82 13-78 (150)
274 1zbp_A Hypothetical protein VP 78.8 11 0.00038 24.6 7.6 72 38-110 5-78 (273)
275 2uwj_G Type III export protein 78.2 5.5 0.00019 22.1 4.4 75 14-95 21-98 (115)
276 2o03_A Probable zinc uptake re 77.9 2.7 9.3E-05 23.8 3.4 46 71-116 16-61 (131)
277 3mwm_A ZUR, putative metal upt 77.8 2.4 8.1E-05 24.4 3.1 49 34-82 17-65 (139)
278 3dss_A Geranylgeranyl transfer 77.5 13 0.00045 24.7 11.1 88 15-104 126-231 (331)
279 2rg8_A Programmed cell death p 77.3 9.1 0.00031 22.8 7.0 66 32-100 12-79 (165)
280 2d2s_A Exocyst complex compone 76.5 12 0.00041 23.7 7.4 84 5-91 24-117 (235)
281 3hzj_A Rabgap1L, RAB GTPase-ac 75.4 7.3 0.00025 25.4 5.3 47 51-97 175-221 (310)
282 4b4t_P 26S proteasome regulato 75.2 18 0.00061 25.1 8.5 89 4-92 142-245 (445)
283 3qye_A TBC1 domain family memb 74.0 7 0.00024 25.8 5.0 47 51-97 209-255 (331)
284 3o48_A Mitochondria fission 1 73.4 11 0.00037 21.8 5.2 61 39-101 49-112 (134)
285 2p1h_A APAF-1, apoptotic prote 73.1 8.4 0.00029 20.3 4.6 37 43-83 49-85 (94)
286 1mzb_A Ferric uptake regulatio 72.9 3.5 0.00012 23.5 3.0 52 31-82 18-70 (136)
287 2qq8_A TBC1 domain family memb 72.8 6 0.00021 26.2 4.4 45 52-96 215-259 (334)
288 3dss_A Geranylgeranyl transfer 71.6 20 0.00067 23.9 11.5 97 15-113 90-192 (331)
289 3eyy_A Putative iron uptake re 71.3 4.8 0.00017 23.3 3.3 49 33-82 21-69 (145)
290 3esl_A Checkpoint serine/threo 70.4 17 0.00056 22.6 6.0 52 13-64 93-149 (202)
291 3bge_A Predicted ATPase; struc 68.9 15 0.00051 22.8 5.2 63 34-96 8-78 (201)
292 2w57_A Ferric uptake regulatio 68.3 7.7 0.00026 22.5 3.8 50 33-82 19-69 (150)
293 1y8m_A FIS1; mitochondria, unk 67.5 16 0.00055 21.4 6.3 61 38-100 47-110 (144)
294 3f3f_C Nucleoporin NUP85; stru 66.4 25 0.00085 25.5 6.6 71 44-117 495-566 (570)
295 2ko4_A Mediator of RNA polymer 66.3 12 0.0004 19.6 3.7 37 20-56 24-62 (81)
296 3bqo_A Telomeric repeat-bindin 65.6 22 0.00074 22.2 5.6 43 15-57 94-144 (211)
297 2b7e_A PRE-mRNA processing pro 64.4 7.4 0.00025 19.1 2.6 28 47-75 3-31 (59)
298 3txn_A 26S proteasome regulato 64.0 32 0.0011 23.6 9.4 23 4-26 24-46 (394)
299 4a1g_A Mitotic checkpoint seri 63.8 20 0.00069 21.1 10.2 55 47-101 82-137 (152)
300 4fhn_B Nucleoporin NUP120; pro 63.7 51 0.0017 25.8 10.8 112 5-118 818-956 (1139)
301 2i2x_B MTAC, methyltransferase 63.7 8.5 0.00029 24.6 3.6 39 76-114 47-85 (258)
302 4h7y_A Dual specificity protei 63.4 21 0.00072 21.3 7.8 86 27-114 10-108 (161)
303 3t8k_A Uncharacterized protein 63.4 21 0.00071 21.2 8.1 91 8-99 12-108 (186)
304 2qfz_A TBC1 domain family memb 63.1 28 0.00097 23.0 6.2 48 51-98 230-277 (345)
305 3no6_A Transcriptional activat 63.0 26 0.00089 22.2 7.0 89 27-116 126-226 (248)
306 3ibx_A TENA, HP1287, putative 61.7 25 0.00087 21.7 5.7 90 27-116 110-210 (221)
307 2keb_A DNA polymerase subunit 61.5 18 0.00061 19.8 6.9 60 47-108 26-90 (101)
308 4a1g_A Mitotic checkpoint seri 61.0 23 0.00078 20.9 5.0 48 17-64 83-135 (152)
309 2f6m_A Suppressor protein STP2 60.0 15 0.00051 18.4 3.6 47 32-79 4-50 (65)
310 1x87_A Urocanase protein; stru 59.2 6.2 0.00021 28.1 2.4 46 44-102 212-257 (551)
311 2wvi_A Mitotic checkpoint seri 58.6 27 0.00091 20.9 5.0 85 15-102 46-133 (164)
312 1uwk_A Urocanate hydratase; hy 58.2 6.1 0.00021 28.1 2.3 46 44-102 217-262 (557)
313 3lvg_A Clathrin heavy chain 1; 58.0 0.12 4E-06 37.0 -6.2 82 29-118 53-134 (624)
314 2fkn_A Urocanate hydratase; ro 57.8 6.3 0.00022 28.0 2.3 46 44-102 213-258 (552)
315 3qil_A Clathrin heavy chain 1; 57.5 12 0.00041 21.3 3.0 53 32-87 34-86 (125)
316 3cqc_A Nuclear pore complex pr 57.3 11 0.00038 24.4 3.3 26 3-28 38-63 (270)
317 4b4t_S RPN3, 26S proteasome re 57.1 51 0.0017 23.7 7.4 57 2-58 234-298 (523)
318 3twr_A Tankyrase-2; ankyrin re 56.8 24 0.00083 19.8 5.5 78 5-87 11-94 (165)
319 4hl4_A TBC1 domain family memb 56.3 30 0.001 22.3 5.3 46 51-97 189-235 (292)
320 3aji_A 26S proteasome non-ATPa 56.0 22 0.00075 21.3 4.4 23 3-25 7-29 (231)
321 3m0z_A Putative aldolase; MCSG 55.0 13 0.00045 23.7 3.2 79 15-93 147-246 (249)
322 2wvi_A Mitotic checkpoint seri 54.5 32 0.0011 20.5 10.7 49 17-65 78-131 (164)
323 3f3f_C Nucleoporin NUP85; stru 54.1 60 0.0021 23.6 7.7 64 20-85 506-569 (570)
324 4fn6_A Thiaminase-2, thiaminas 53.9 37 0.0013 21.1 8.0 88 27-116 107-207 (229)
325 1q2z_A ATP-dependent DNA helic 53.3 7.9 0.00027 21.8 1.9 50 45-97 42-95 (120)
326 3txn_A 26S proteasome regulato 51.7 55 0.0019 22.4 8.9 57 35-91 104-165 (394)
327 4aez_C MAD3, mitotic spindle c 51.0 44 0.0015 21.1 9.1 84 15-101 100-186 (223)
328 1zl8_A LIN-7; heterodimer, alp 49.8 8.8 0.0003 18.2 1.4 21 79-99 7-27 (53)
329 3crd_A Raidd; caspase recruitm 49.5 29 0.00099 18.6 4.2 29 14-42 50-78 (100)
330 3hra_A Ankyrin repeat family p 49.3 37 0.0013 19.7 4.7 90 5-99 75-172 (201)
331 3m6y_A 4-hydroxy-2-oxoglutarat 48.9 13 0.00045 24.0 2.5 79 15-93 170-269 (275)
332 3lxu_X Tripeptidyl-peptidase 2 48.2 1.1E+02 0.0037 24.9 7.8 33 42-76 1296-1328(1354)
333 2p22_A Suppressor protein STP2 46.8 35 0.0012 20.6 4.1 49 63-112 109-157 (174)
334 4aez_C MAD3, mitotic spindle c 46.4 43 0.0015 21.1 4.6 49 16-64 131-184 (223)
335 1fkm_A Protein (GYP1P), ORF YO 46.0 24 0.00083 24.0 3.7 45 51-95 217-261 (396)
336 1jog_A Hypothetical protein HI 45.7 43 0.0015 19.4 4.4 51 46-96 54-108 (146)
337 1nzn_A CGI-135 protein, fissio 45.5 41 0.0014 19.1 6.2 75 41-117 12-91 (126)
338 1k1a_A B-cell lymphoma 3-encod 43.7 50 0.0017 19.7 5.3 83 4-91 11-102 (241)
339 1uzc_A Hypothetical protein FL 43.6 32 0.0011 17.4 3.1 33 45-77 13-45 (71)
340 2r9g_A AAA ATPase, central reg 43.3 58 0.002 20.3 9.1 63 33-96 14-84 (204)
341 3f6q_A Integrin-linked protein 42.6 47 0.0016 19.0 5.3 75 7-86 10-90 (179)
342 1rw2_A ATP-dependent DNA helic 42.1 10 0.00036 22.3 1.3 49 45-96 73-125 (152)
343 1wdy_A 2-5A-dependent ribonucl 41.8 58 0.002 19.9 5.0 23 4-26 7-29 (285)
344 2p22_A Suppressor protein STP2 41.8 38 0.0013 20.5 3.7 53 28-81 109-161 (174)
345 1wgl_A TOLL-interacting protei 41.3 32 0.0011 16.7 3.5 21 43-63 36-56 (59)
346 1oai_A Nuclear RNA export fact 41.2 32 0.0011 16.7 4.5 22 43-64 33-55 (59)
347 1dp3_A TRAM protein; helix-loo 40.9 16 0.00055 17.6 1.6 40 40-79 6-45 (55)
348 3v30_A DNA-binding protein rfx 40.8 49 0.0017 18.7 4.7 47 6-53 6-56 (172)
349 1b79_A DNAB helicase; hexamer, 40.4 47 0.0016 18.4 6.6 59 46-107 55-116 (119)
350 2jp7_A MRNA export factor MEX6 40.2 22 0.00076 17.2 2.1 20 44-64 33-52 (57)
351 1ixm_A SPO0B, protein (sporula 39.8 38 0.0013 20.6 3.6 42 17-58 17-60 (192)
352 4gq2_M Nucleoporin NUP120; bet 39.5 1.3E+02 0.0044 23.2 11.8 108 5-114 816-950 (950)
353 2ijq_A Hypothetical protein; s 38.7 62 0.0021 19.2 7.3 60 33-93 36-103 (161)
354 2d2s_A Exocyst complex compone 38.6 73 0.0025 20.1 6.2 78 35-115 23-106 (235)
355 3lpz_A GET4 (YOR164C homolog); 38.6 88 0.003 21.0 9.0 24 32-55 37-60 (336)
356 4g8k_A 2-5A-dependent ribonucl 37.7 79 0.0027 20.2 7.1 13 10-22 247-259 (337)
357 3rm5_A Hydroxymethylpyrimidine 37.5 60 0.0021 23.2 4.8 88 28-116 439-538 (550)
358 2dod_A Transcription elongatio 37.5 42 0.0014 17.5 3.0 35 46-81 16-51 (82)
359 3qwl_A TBC1 domain family memb 37.5 61 0.0021 21.2 4.5 46 51-96 188-233 (294)
360 3v31_A Ankyrin repeat family A 37.3 55 0.0019 18.3 5.3 20 6-25 7-26 (167)
361 4gns_B Protein CSD3, chitin bi 36.8 1.3E+02 0.0046 22.6 10.9 62 28-91 611-681 (754)
362 1v3f_A Pleckstrin 2; three-hel 36.7 56 0.0019 18.2 4.0 34 63-96 35-71 (120)
363 3kae_A CDC27, possible protein 36.1 77 0.0026 19.6 9.9 80 10-91 44-140 (242)
364 2pk8_A Uncharacterized protein 36.1 41 0.0014 18.2 2.8 23 46-68 19-41 (103)
365 3cqc_A Nuclear pore complex pr 35.6 26 0.0009 22.6 2.5 27 31-57 35-61 (270)
366 3ljn_A Hypothetical protein; a 34.5 94 0.0032 20.1 5.7 91 4-99 22-115 (364)
367 3utm_A Tankyrase-1; tankyrase, 34.1 89 0.0031 19.8 5.6 20 6-25 28-47 (351)
368 1ihb_A P18-INK4C(INK6), cyclin 33.6 40 0.0014 18.7 2.9 24 2-25 5-28 (162)
369 3bu8_A Telomeric repeat-bindin 31.7 1E+02 0.0034 19.6 8.2 49 46-94 88-143 (235)
370 2rfa_A Transient receptor pote 31.7 83 0.0028 18.6 5.1 54 40-97 128-183 (232)
371 2wpv_A GET4, UPF0363 protein Y 30.8 1.2E+02 0.004 20.1 9.4 24 32-55 35-58 (312)
372 3c1d_A Protein ORAA, regulator 30.1 85 0.0029 18.3 6.3 76 34-114 69-144 (159)
373 1e5r_A Proline oxidase; oxidor 30.0 81 0.0028 20.7 4.1 57 29-86 208-267 (290)
374 3ffl_A Anaphase-promoting comp 29.2 96 0.0033 18.6 9.2 86 6-91 27-148 (167)
375 2wpv_A GET4, UPF0363 protein Y 28.9 1.3E+02 0.0044 19.9 10.1 78 39-116 62-150 (312)
376 4b8b_A General negative regula 28.5 1.8E+02 0.006 21.4 6.2 70 43-112 462-543 (603)
377 3a54_A Protein-glutaminase; mu 28.3 1.2E+02 0.0041 19.8 4.4 37 28-64 120-175 (305)
378 1fsh_A Dishevelled-1; three-he 27.7 79 0.0027 17.1 4.7 49 48-96 20-85 (105)
379 2cos_A Serine/threonine protei 27.3 59 0.002 15.5 2.9 36 51-91 11-48 (54)
380 2qx5_A Nucleoporin NIC96; mRNA 26.7 2E+02 0.0067 21.4 8.6 89 8-99 452-569 (661)
381 4ewi_A Nacht, LRR and PYD doma 26.6 29 0.00099 19.3 1.4 29 65-93 68-96 (113)
382 1bd8_A P19INK4D CDK4/6 inhibit 26.5 86 0.0029 17.2 4.7 78 4-88 4-88 (156)
383 1nnv_A Hypothetical protein HI 26.5 50 0.0017 18.3 2.2 26 46-71 17-43 (110)
384 2hm2_Q ASC2, pyrin-only protei 26.2 31 0.001 18.1 1.4 27 31-57 51-77 (89)
385 3ezx_A MMCP 1, monomethylamine 25.9 1.1E+02 0.0037 18.9 4.0 41 39-79 11-51 (215)
386 4ady_A RPN2, 26S proteasome re 25.6 1.7E+02 0.0058 22.9 5.6 40 15-57 218-257 (963)
387 3bqs_A Uncharacterized protein 25.3 85 0.0029 16.7 3.8 30 47-76 34-63 (93)
388 3ctd_A Putative ATPase, AAA fa 25.2 1.3E+02 0.0045 18.8 9.4 68 29-96 31-106 (213)
389 1s70_B 130 kDa myosin-binding 25.1 1.3E+02 0.0044 18.6 5.3 79 4-88 42-126 (299)
390 3mab_A Uncharacterized protein 25.0 87 0.003 16.7 3.8 29 48-76 35-63 (93)
391 3bge_A Predicted ATPase; struc 24.7 1.3E+02 0.0045 18.6 6.0 34 76-109 18-51 (201)
392 2r9g_A AAA ATPase, central reg 24.6 1.3E+02 0.0045 18.7 5.5 25 76-101 25-49 (204)
393 2jab_A H10-2-G3; HER2, darpin, 23.9 93 0.0032 16.7 5.4 85 5-98 17-106 (136)
394 3k1s_A PTS system, cellobiose- 23.7 54 0.0018 18.1 2.1 17 9-25 32-48 (109)
395 1awc_B Protein (GA binding pro 23.4 1E+02 0.0035 16.9 4.3 21 5-25 5-25 (153)
396 1d9s_A Cyclin-dependent kinase 23.2 45 0.0015 18.1 1.8 85 4-98 14-104 (136)
397 2aja_A Ankyrin repeat family p 23.1 1.7E+02 0.006 19.5 9.1 100 6-115 96-211 (376)
398 4hbd_A KN motif and ankyrin re 23.1 1.1E+02 0.0036 19.2 3.7 56 5-60 114-173 (276)
399 1v54_I STA, cytochrome C oxida 22.9 61 0.0021 16.6 2.0 14 49-62 56-69 (73)
400 1xqo_A 8-oxoguanine DNA glycos 22.8 1.3E+02 0.0044 19.4 3.9 32 46-79 196-231 (256)
401 2e2a_A Protein (enzyme IIA); h 22.7 93 0.0032 17.0 2.9 19 40-58 30-48 (105)
402 1wwp_A Hypothetical protein TT 22.5 1.1E+02 0.0036 16.8 3.3 63 29-95 19-85 (119)
403 1wcr_A PTS system, N, N'-diace 22.5 95 0.0032 16.9 2.9 19 40-58 28-46 (103)
404 3qf2_A Nacht, LRR and PYD doma 22.4 31 0.0011 19.0 1.0 21 67-87 65-85 (110)
405 3ui2_A Signal recognition part 22.2 1.4E+02 0.0047 18.2 4.1 81 4-89 47-132 (244)
406 2km6_A Nacht, LRR and PYD doma 22.1 27 0.00092 19.2 0.6 9 47-55 71-79 (106)
407 3lxu_X Tripeptidyl-peptidase 2 21.8 3.3E+02 0.011 22.3 8.1 80 32-114 1236-1331(1354)
408 3ltj_A Alpharep-4; protein eng 21.7 1.3E+02 0.0044 17.4 9.3 11 34-44 94-104 (201)
409 1n0r_A 4ANK, 4 ankyrin repeats 21.6 96 0.0033 16.0 4.9 86 4-98 4-94 (126)
410 4b4t_P 26S proteasome regulato 21.4 2.1E+02 0.0071 19.7 7.3 59 33-91 140-203 (445)
411 2ve8_A FTSK, DNA translocase F 21.0 97 0.0033 15.8 2.6 43 15-62 12-54 (73)
412 3aaa_C Myotrophin, protein V-1 20.9 1E+02 0.0035 16.1 5.4 85 4-98 9-99 (123)
413 1pbw_A Rhogap domain, phosphat 20.9 1.5E+02 0.0052 18.0 6.2 27 31-57 98-124 (216)
414 1vcs_A Vesicle transport throu 20.8 1.1E+02 0.0038 16.4 4.7 11 46-56 47-57 (102)
415 2gno_A DNA polymerase III, gam 20.7 1.7E+02 0.0058 19.0 4.4 41 68-110 210-252 (305)
416 3jxi_A Vanilloid receptor-rela 20.5 58 0.002 19.8 2.1 55 37-91 9-72 (260)
417 1jyo_E Protein tyrosine phosph 20.4 1.2E+02 0.0041 16.6 7.2 50 14-63 27-76 (105)
418 4b8b_A General negative regula 20.3 2.6E+02 0.009 20.6 5.5 33 79-111 463-495 (603)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.97 E-value=1.2e-30 Score=182.67 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=99.1
Q ss_pred CchHHHHHHHhcCC---------HHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH
Q 046694 1 MIEPRLDFYTRTGR---------IDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67 (118)
Q Consensus 1 t~~~ll~~~~~~~~---------~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~ 67 (118)
|||+||.+|++.+. +++|.++|++|. .||..|||++|.+|++.|++++|.++|++|++.|+.||..|
T Consensus 63 tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t 142 (501)
T 4g26_A 63 HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS 142 (501)
T ss_dssp HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce
Confidence 58888888887654 678888888885 57888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|+++|.+|++.|++++|.++|++|.+.|+.||..||++||++|++.|+++
T Consensus 143 yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d 192 (501)
T 4g26_A 143 YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNAD 192 (501)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHH
T ss_pred ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHH
Confidence 88888888888888888888888888888888888888888888888765
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.96 E-value=5.3e-29 Score=174.33 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=110.6
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
|||+||.+|++.|++++|.++|++|. .||..+||++|.+|++.|++++|.++|++|.+.|+.||..||+++|++|+
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~ 186 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSM 186 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 69999999999999999999999997 68999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 77 LGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 77 ~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
+.|++++|.+++++|.+.|+.|+..||+.|+..|++.+
T Consensus 187 ~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~s~~ 224 (501)
T 4g26_A 187 DTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEV 224 (501)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHHSHH
T ss_pred hCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999998754
No 3
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.96 E-value=9e-30 Score=186.83 Aligned_cols=114 Identities=11% Similarity=0.106 Sum_probs=107.0
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCC-------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHH
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLP-------VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLT 73 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~-------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 73 (118)
|||+||++||+.|++++|..+|++|. .||+.|||+||++||+.|++++|.++|++|++.|+.||.+|||++|+
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 69999999999999999999997763 68999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCh-hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 74 ACSLGGLV-EKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 74 ~~~~~~~~-~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
++|+.|+. +.|.++|++|.+.|+.||..||++++..+.+.+
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~ 250 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRAT 250 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHHH
Confidence 99999985 789999999999999999999998877776654
No 4
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.88 E-value=2.2e-22 Score=148.20 Aligned_cols=88 Identities=10% Similarity=0.042 Sum_probs=83.3
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMRE---DGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYAC 105 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~---~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~ 105 (118)
-..|||++|++||+.|++++|.++|++|.+ .|+.||.+|||++|++||+.|++++|.++|++|.+.|+.||..|||+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYnt 205 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 446999999999999999999999999864 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccc
Q 046694 106 MVYLLIKYNQK 116 (118)
Q Consensus 106 li~~~~~~g~~ 116 (118)
||+++|+.|+.
T Consensus 206 LI~glcK~G~~ 216 (1134)
T 3spa_A 206 ALQCMGRQDQD 216 (1134)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHhCCCc
Confidence 99999999874
No 5
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.56 E-value=5.5e-14 Score=98.71 Aligned_cols=114 Identities=11% Similarity=0.012 Sum_probs=56.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|+.++.+|.+.|++++|.++|+++. ..+..+|+.+..+|.+.|++++|.++|+++.+.. +.+..+|+.+...|.+.
T Consensus 410 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 488 (597)
T 2xpi_A 410 WIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALF-QYDPLLLNELGVVAFNK 488 (597)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHh
Confidence 4455555555555555555555442 2244455555555555555555555555554332 12444555555555555
Q ss_pred CChhhHHHHHHHHhhc----CCCcc--HHHHHHHHHHHHHcccc
Q 046694 79 GLVEKGKKFFDEMQAR----NVKPT--ETHYACMVYLLIKYNQK 116 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~----g~~~~--~~t~~~li~~~~~~g~~ 116 (118)
|++++|.++|+++.+. +..|+ ..+|..+..+|.+.|++
T Consensus 489 g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~ 532 (597)
T 2xpi_A 489 SDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMY 532 (597)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCH
Confidence 5555555555555333 44444 44555555555555543
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.55 E-value=4.9e-14 Score=99.00 Aligned_cols=114 Identities=11% Similarity=0.067 Sum_probs=102.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|+.+..+|.+.|++++|.++|+++. ..+..+|+.++.+|.+.|++++|.++|+++.+.+ +.+..+|+.+..+|.+.
T Consensus 376 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 376 WLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLF-QGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-TTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHc
Confidence 6788999999999999999999875 4578899999999999999999999999998763 34889999999999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.++|+++.+.. +.+..+|+.+..+|.+.|+++
T Consensus 455 g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 455 GNILLANEYLQSSYALF-QYDPLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp TCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHH
Confidence 99999999999997754 347899999999999999875
No 7
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.22 E-value=5.6e-10 Score=63.48 Aligned_cols=114 Identities=13% Similarity=0.140 Sum_probs=96.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...|.+.|++++|..+|+++. ..+...|..+...+...|++++|...|+++.+.+ +.+...+..+...+...
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-CCchHHHHHHHHHHHHh
Confidence 5677888999999999999999774 3477788899999999999999999999998764 34677888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.++++++.+.. +.+...+..+..++.+.|+.+
T Consensus 83 ~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~ 120 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYD 120 (136)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHH
T ss_pred cCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHH
Confidence 99999999999997754 335778888999999888764
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.15 E-value=8.4e-10 Score=73.98 Aligned_cols=114 Identities=12% Similarity=0.041 Sum_probs=88.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+..+|.+.|++++|...|+++. ..+..+|..+...+.+.|++++|.+.|+++.+.. +.+..+++.+...+.+.
T Consensus 240 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 318 (388)
T 1w3b_A 240 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC-PTHADSLNNLANIKREQ 318 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHc
Confidence 4566778888888888888888764 3356778888888888888888888888887652 45778888888888888
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+.++++.+.. +.+..++..+..+|.+.|+.+
T Consensus 319 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~ 356 (388)
T 1w3b_A 319 GNIEEAVRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQ 356 (388)
T ss_dssp TCHHHHHHHHHHHTTSC-TTCHHHHHHHHHHHHTTTCCH
T ss_pred CCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHH
Confidence 88888888888886642 345778888888888888765
No 9
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.03 E-value=1.2e-08 Score=66.86 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=45.7
Q ss_pred HHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH---HHHHHHHhcCCChhh
Q 046694 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH---IGVLTACSLGGLVEK 83 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~---~~ll~~~~~~~~~~~ 83 (118)
..|.+.|++++|+..|++ ..+...+..+...+.+.|++++|.+.|+++.+.. |+.... ...+..+...|++++
T Consensus 109 ~~~~~~g~~~~Al~~l~~--~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~~~~~e 184 (291)
T 3mkr_A 109 SIYFYDQNPDAALRTLHQ--GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD--EDATLTQLATAWVSLAAGGEKLQD 184 (291)
T ss_dssp HHHHHTTCHHHHHHHHTT--CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCTTHHHH
T ss_pred HHHHHCCCHHHHHHHHhC--CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhCchHHHH
Confidence 344445555555555554 2344444555555555555555555555554332 221111 112222223344445
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 84 GKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 84 a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
|..+|+++.+. .+.+...++.+-.++.+.|++
T Consensus 185 A~~~~~~~l~~-~p~~~~~~~~la~~~~~~g~~ 216 (291)
T 3mkr_A 185 AYYIFQEMADK-CSPTLLLLNGQAACHMAQGRW 216 (291)
T ss_dssp HHHHHHHHHHH-SCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCCH
Confidence 55555444433 223444444444444444443
No 10
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.02 E-value=1.1e-08 Score=64.62 Aligned_cols=85 Identities=7% Similarity=-0.057 Sum_probs=34.9
Q ss_pred HHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChh
Q 046694 7 DFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~ 82 (118)
.+|.+.|++++|...|++.. ..+...|..+...|...|++++|.+.|++..+.+..| +...+..+...+.+.|+++
T Consensus 79 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 158 (252)
T 2ho1_A 79 VVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPA 158 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHH
Confidence 33444444444444444332 1233344444444444444444444444443321222 2333344444444444444
Q ss_pred hHHHHHHHH
Q 046694 83 KGKKFFDEM 91 (118)
Q Consensus 83 ~a~~~~~~m 91 (118)
+|.+.+++.
T Consensus 159 ~A~~~~~~~ 167 (252)
T 2ho1_A 159 QAKEYFEKS 167 (252)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 11
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.02 E-value=3.8e-08 Score=55.16 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=89.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+.+.|++++|..+|++.. ..+...+..+...+...|++++|...|+++.+.. +.+...+..+...+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHh
Confidence 4556778899999999999999775 3477889999999999999999999999998753 34678889999999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
|++++|...++++.+.. +.+...+..+-.++.+.
T Consensus 91 ~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 91 GDYDEAIEYYQKALELD-PNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhc
Confidence 99999999999997754 23455666666665544
No 12
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.01 E-value=3.3e-10 Score=78.23 Aligned_cols=97 Identities=7% Similarity=-0.053 Sum_probs=44.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
.+.|+.+|.+.|++++++++++ .|+..+|+.+...|...|.+++|...|+.+ ..|..+..++.+.|++
T Consensus 97 ~~~Li~~Y~Klg~l~e~e~f~~---~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~y 164 (449)
T 1b89_A 97 ETELIFALAKTNRLAELEEFIN---GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEY 164 (449)
T ss_dssp ------------CHHHHTTTTT---CC----------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHc---CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccH
Confidence 3456667777777777776664 255556666666666666666666666654 3666666666666666
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
++|.+.+.++ .++.+|..++.+|...|++
T Consensus 165 q~AVea~~KA------~~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 165 QAAVDGARKA------NSTRTWKEVCFACVDGKEF 193 (449)
T ss_dssp HHHHHHHHHH------TCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHc------CCchhHHHHHHHHHHcCcH
Confidence 6666666666 2566666666666666654
No 13
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.00 E-value=2.2e-08 Score=61.71 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=48.5
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhc-CCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGML-GELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGG 79 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~ 79 (118)
+..+|...|++++|...|++.. ..+...+..+...+... |++++|...|++..+.+..| +...+..+...+.+.|
T Consensus 48 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (225)
T 2vq2_A 48 RAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQG 127 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcC
Confidence 3344444444444444444332 22344444444445555 55555555555544421122 2344444444444555
Q ss_pred ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 80 LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
++++|...+++..+.. +.+...+..+..++.+.|+
T Consensus 128 ~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~ 162 (225)
T 2vq2_A 128 QFGLAEAYLKRSLAAQ-PQFPPAFKELARTKMLAGQ 162 (225)
T ss_dssp CHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhC-CCCchHHHHHHHHHHHcCC
Confidence 5555555555443321 1124444444444444444
No 14
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.00 E-value=1.8e-08 Score=60.24 Aligned_cols=109 Identities=12% Similarity=-0.006 Sum_probs=51.0
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
+...+...|++++|...|++.. ..+...+..+...+...|++++|.+.+++..+.. +.+...+..+...+...|++
T Consensus 14 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~ 92 (186)
T 3as5_A 14 KGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADA-PDNVKVATVLGLTYVQVQKY 92 (186)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCH
Confidence 3444455555555555555443 1244444555555555555555555555544331 12344444444455555555
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
++|.+.+++..+.. +.+...+..+..++.+.|+
T Consensus 93 ~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~ 125 (186)
T 3as5_A 93 DLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGR 125 (186)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCc
Confidence 55555555543321 2234444444444444444
No 15
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.00 E-value=2e-08 Score=61.94 Aligned_cols=115 Identities=15% Similarity=-0.031 Sum_probs=82.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+...|++++|...|++.. ..+...|..+...+...|++++|.+.|++..+.. +.+...+..+...+...
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 11 KTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSAEINNNYGWFLCGR 89 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHh
Confidence 3456667778888888888887654 3456677778888888888888888888876642 23566777778888888
Q ss_pred -CChhhHHHHHHHHhhcCCCcc-HHHHHHHHHHHHHccccc
Q 046694 79 -GLVEKGKKFFDEMQARNVKPT-ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 -~~~~~a~~~~~~m~~~g~~~~-~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+.++++.+.+..|+ ...+..+..++.+.|+.+
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 130 (225)
T 2vq2_A 90 LNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFG 130 (225)
T ss_dssp TCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHH
T ss_pred cCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHH
Confidence 888888888888866333333 566777777777777654
No 16
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.99 E-value=3.7e-08 Score=58.79 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=97.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...|.+.|++++|...|++.. ..+...|..+...+...|++++|.+.|++..+.. +.+...+..+...+.+.
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 45 ALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHc
Confidence 4566778899999999999999765 4477889999999999999999999999998763 34678888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+.+++..+.. +.+...+..+..++.+.|+.+
T Consensus 124 ~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 124 GRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred CcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHcCCHH
Confidence 99999999999997754 346788999999999998765
No 17
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=9.5e-09 Score=68.85 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=75.5
Q ss_pred HHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhh
Q 046694 7 DFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEK 83 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~ 83 (118)
..+...|++++|...|++.. ..+..+|..+...+.+.|++++|.+.|+++.+.. +.+..+|..+...+.+.|++++
T Consensus 211 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~ 289 (388)
T 1w3b_A 211 NVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ-PHFPDAYCNLANALKEKGSVAE 289 (388)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-SSCHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHH
Confidence 33444444444444444332 2256677788888888888888888888887653 2246678888888888888888
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 84 GKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 84 a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|.+.|+++.+. .+.+..+++.+..++.+.|+++
T Consensus 290 A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~ 322 (388)
T 1w3b_A 290 AEDCYNTALRL-CPTHADSLNNLANIKREQGNIE 322 (388)
T ss_dssp HHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHhh-CcccHHHHHHHHHHHHHcCCHH
Confidence 88888888665 2456778888888888877764
No 18
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.96 E-value=1.4e-08 Score=64.07 Aligned_cols=115 Identities=9% Similarity=-0.040 Sum_probs=97.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...|...|++++|...|++.. ..+...|..+...+...|++++|.+.|++..+.. +.+...+..+...+...
T Consensus 40 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~ 118 (252)
T 2ho1_A 40 YIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASD-SRNARVLNNYGGFLYEQ 118 (252)
T ss_dssp HHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHH
Confidence 4456778889999999999999775 3477889999999999999999999999998763 33678899999999999
Q ss_pred CChhhHHHHHHHHhhcCCCc-cHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+++++..+.+..| +...+..+..+|.+.|+++
T Consensus 119 g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 158 (252)
T 2ho1_A 119 KRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPA 158 (252)
T ss_dssp TCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHH
Confidence 99999999999997754455 5778888889998888764
No 19
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.95 E-value=1.4e-08 Score=68.94 Aligned_cols=111 Identities=9% Similarity=-0.051 Sum_probs=57.4
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC--CC-CHhhHHHH------------HHHHHhcCCHHHHHHHHHHHHHcCCCcc---
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP--VK-DSASWITL------------ILGYGMLGELDVAINLFEAMREDGVEYY--- 64 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~--~~-~~~~~~~l------------i~~~~~~~~~~~a~~~~~~m~~~~~~p~--- 64 (118)
..+..+|.+.|++++|...|+++. .| +...+..+ ...+.+.|++++|...|+++.+. .|+
T Consensus 215 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~ 292 (450)
T 2y4t_A 215 YKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT--EPSIAE 292 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCSSHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcchH
Confidence 444555555555555555555443 12 23333332 45555555666666666555542 222
Q ss_pred --HHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 65 --PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 65 --~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
...+..+...+.+.|++++|...++++.+.. +.+...|..+..+|.+.|++
T Consensus 293 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~-p~~~~~~~~l~~~~~~~~~~ 345 (450)
T 2y4t_A 293 YTVRSKERICHCFSKDEKPVEAIRVCSEVLQME-PDNVNALKDRAEAYLIEEMY 345 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhcCH
Confidence 2345555556666666666666666654432 22455566666666655554
No 20
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.95 E-value=2e-08 Score=65.20 Aligned_cols=115 Identities=14% Similarity=0.042 Sum_probs=94.9
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
+..+...|.+.|++++|...|++.. ..+...|..+...+...|++++|...|++..+.. +.+...+..+...+.+.
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDIN-PGYVRVMYNMAVSYSNM 253 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHh
Confidence 4556778889999999999998764 3467889999999999999999999999987653 33678888999999999
Q ss_pred CChhhHHHHHHHHhhcCCCc-----------cHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKP-----------TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~-----------~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+.+++..+..... +...|..+..++.+.|+.+
T Consensus 254 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 254 SQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred ccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 99999999999986644332 5788889999999988764
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.94 E-value=1.4e-08 Score=67.12 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=93.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+..+|.+.|++++|...|++.. ..+...|..+...+...|++++|...|++..+.. +.+...+..+...+.+.
T Consensus 220 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 220 QCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ-PGYIRSRYNLGISCINL 298 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHC
Confidence 4567778889999999999998764 3467789999999999999999999999987652 33678888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCc----------cHHHHHHHHHHHHHcccccC
Q 046694 79 GLVEKGKKFFDEMQARNVKP----------TETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~----------~~~t~~~li~~~~~~g~~~~ 118 (118)
|++++|...|++..+..... ...+|..+..+|.+.|+.++
T Consensus 299 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 299 GAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp TCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred CCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 99999999999885532211 26789999999999888753
No 22
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.93 E-value=1.9e-08 Score=65.82 Aligned_cols=105 Identities=7% Similarity=-0.009 Sum_probs=51.5
Q ss_pred HHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc-HHHHHHHHHHHhcCCChhhH
Q 046694 6 LDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY-PVSHIGVLTACSLGGLVEKG 84 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~-~~~~~~ll~~~~~~~~~~~a 84 (118)
..+|...|++++|...++....|+..++..+...+...++.++|++.++++...+..|+ ...+..+-..+...|++++|
T Consensus 41 ~r~yi~~g~~~~al~~~~~~~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~A 120 (291)
T 3mkr_A 41 YRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAA 120 (291)
T ss_dssp HHHHHHTTCHHHHHHHSCTTSCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHCCCHHHHHHHhcccCChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHH
Confidence 34455555555555555444344445555555555555555555555555554443332 23333333444455555555
Q ss_pred HHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 85 KKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 85 ~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.+.+++ ..+...+..+..+|.+.|+.
T Consensus 121 l~~l~~------~~~~~~~~~l~~~~~~~g~~ 146 (291)
T 3mkr_A 121 LRTLHQ------GDSLECMAMTVQILLKLDRL 146 (291)
T ss_dssp HHHHTT------CCSHHHHHHHHHHHHHTTCH
T ss_pred HHHHhC------CCCHHHHHHHHHHHHHCCCH
Confidence 555544 23444444555555554443
No 23
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.93 E-value=1.1e-08 Score=69.53 Aligned_cols=112 Identities=9% Similarity=0.084 Sum_probs=83.2
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHH------
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGV------ 71 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~l------ 71 (118)
+..+..+|.+.|++++|...|+++. ..+..+|..+...|...|++++|...|+++.+. .| +...+..+
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~p~~~~~~~~~~~~~~~ 257 (450)
T 2y4t_A 180 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKL--DQDHKRCFAHYKQVKKL 257 (450)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCChHHHHHHHHHHHHH
Confidence 4556777888888888888888764 347788888888888888888888888888754 33 33334333
Q ss_pred ------HHHHhcCCChhhHHHHHHHHhhcCCCcc-----HHHHHHHHHHHHHccccc
Q 046694 72 ------LTACSLGGLVEKGKKFFDEMQARNVKPT-----ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 72 ------l~~~~~~~~~~~a~~~~~~m~~~g~~~~-----~~t~~~li~~~~~~g~~~ 117 (118)
...+.+.|++++|..+|+++.+. .|+ ..++..+..++.+.|+++
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~l~~~~~~~g~~~ 312 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKT--EPSIAEYTVRSKERICHCFSKDEKPV 312 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHHHCCCHH
Confidence 67788888888888888888663 333 447778888888888764
No 24
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.92 E-value=1.4e-07 Score=53.20 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=94.9
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+...|++++|...|++.. ..+...|..+...+...|++++|.+.+++..+.. +.+...+..+...+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 93 (131)
T 2vyi_A 15 LKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-PAYSKAYGRMGLALSSL 93 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-ccCHHHHHHHHHHHHHh
Confidence 3456678889999999999999764 3477889999999999999999999999998753 33577888889999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|.+.+++..+.. +.+...+..+..++.+.|+.+
T Consensus 94 ~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 94 NKHVEAVAYYKKALELD-PDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp TCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHHhcCC
Confidence 99999999999997753 236778888889998888753
No 25
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.90 E-value=5.9e-08 Score=60.59 Aligned_cols=110 Identities=9% Similarity=0.070 Sum_probs=51.1
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
+...|.+.|++++|...|++.. ..+...+..+...+...|++++|...+++..+.. +.+...+..+...+.+.|++
T Consensus 97 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 97 AGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGMCLANEGML 175 (243)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHcCCH
Confidence 3344444555555555554332 2234444445555555555555555555544331 12344444455555555555
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
++|.+.+++..+.. +.+..++..+..+|.+.|+.
T Consensus 176 ~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 176 DEALSQFAAVTEQD-PGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhC-cccHHHHHHHHHHHHHccCH
Confidence 55555555543332 12344455555555555443
No 26
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.88 E-value=2.4e-07 Score=57.06 Aligned_cols=113 Identities=11% Similarity=-0.047 Sum_probs=95.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhh
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEK 83 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~ 83 (118)
.+-..+.+.|++++|...|++...++...|..+-..|...|++++|.+.|++..+.. +.+...+..+-..+.+.|++++
T Consensus 11 ~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~lg~~~~~~~~~~~ 89 (213)
T 1hh8_A 11 NEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGMLYYQTEKYDL 89 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcccHHH
Confidence 345677889999999999999988899999999999999999999999999998753 3467889999999999999999
Q ss_pred HHHHHHHHhhcCC--------------Cc-cHHHHHHHHHHHHHccccc
Q 046694 84 GKKFFDEMQARNV--------------KP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 84 a~~~~~~m~~~g~--------------~~-~~~t~~~li~~~~~~g~~~ 117 (118)
|.+.|++..+..- .| ....+..+-.+|.+.|+.+
T Consensus 90 A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 138 (213)
T 1hh8_A 90 AIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWK 138 (213)
T ss_dssp HHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHH
Confidence 9999999976432 12 2367888888888888764
No 27
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.88 E-value=9.5e-08 Score=59.65 Aligned_cols=114 Identities=9% Similarity=-0.047 Sum_probs=89.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...|.+.|++++|...|++.. ..+...+..+...+...|++++|.+.|++..+.. +.+...+..+...+.+.
T Consensus 60 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~ 138 (243)
T 2q7f_A 60 YINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKL 138 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHh
Confidence 3456677888899999999888764 3477788888888899999999999999887653 33667788888888899
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|..++++..+.. +.+...+..+..++.+.|+.+
T Consensus 139 ~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 176 (243)
T 2q7f_A 139 EQPKLALPYLQRAVELN-ENDTEARFQFGMCLANEGMLD 176 (243)
T ss_dssp SCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCH
T ss_pred ccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHcCCHH
Confidence 99999999999886643 335777888888888888764
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.87 E-value=4e-08 Score=61.48 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 44 GELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
|++++|...|++..+. .| +...+..+-..+...|++++|...|++..+.. .+...+..+-.+|.+.|+.
T Consensus 98 g~~~~A~~~~~~al~~--~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 98 GYLEQALSVLKDAERV--NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCH
T ss_pred cCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHHHHHHHHHHHHcCCH
Confidence 4444444444444332 12 23344444444444444444444444444433 3444444444444444443
No 29
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.86 E-value=2.1e-08 Score=66.63 Aligned_cols=112 Identities=10% Similarity=-0.040 Sum_probs=90.4
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CC---CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VK---DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~---~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
.+...|.+.|++++|...|++.. .| +..+|..+...|...|++++|.+.|++..+.. +.+..++..+...+.+.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYSLWNRLGATLANG 260 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHc
Confidence 45678888999999999999875 23 68899999999999999999999999998753 34688999999999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|...|++..+.. +.+..++..+..+|.+.|+.+
T Consensus 261 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQ-PGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCH
T ss_pred CCHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHCCCHH
Confidence 99999999999997753 334888999999999998865
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.85 E-value=4.3e-08 Score=61.35 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=92.3
Q ss_pred chHHHHHHHhc-----------CCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH
Q 046694 2 IEPRLDFYTRT-----------GRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~-----------~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~ 67 (118)
|..+-.+|.+. |++++|+..|++.. ..+...|..+-..+...|++++|...|++..+.. .+...
T Consensus 76 ~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~ 153 (217)
T 2pl2_A 76 YMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEI 153 (217)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHH
T ss_pred HHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHH
Confidence 34556667777 99999999998765 3477889999999999999999999999998877 68889
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccccC
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~~ 118 (118)
+..+-..+...|++++|...|++..+.. +.+...+..+..++.+.|+.++
T Consensus 154 ~~~la~~~~~~g~~~~A~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~ 203 (217)
T 2pl2_A 154 RSALAELYLSMGRLDEALAQYAKALEQA-PKDLDLRVRYASALLLKGKAEE 203 (217)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHccCHHH
Confidence 9999999999999999999999997753 3357788889999988888764
No 31
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.85 E-value=1e-08 Score=70.88 Aligned_cols=101 Identities=13% Similarity=0.030 Sum_probs=59.1
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
+|+.+...|...|++++|..+|.++ ..|..+..++.+.|++++|.+.+.++ .++.+|..++.+|...|+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~e 192 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGKE 192 (449)
T ss_dssp -------------CTTTHHHHHHHT-----TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcCc
Confidence 4666777777778888888887766 36777777777777777777777776 266777777777777777
Q ss_pred hhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 81 VEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
++.|...... +...+.....++..|.+.|+++
T Consensus 193 f~lA~~~~l~-----L~~~ad~l~~lv~~Yek~G~~e 224 (449)
T 1b89_A 193 FRLAQMCGLH-----IVVHADELEELINYYQDRGYFE 224 (449)
T ss_dssp HHHHHHTTTT-----TTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHH-----HHhCHhhHHHHHHHHHHCCCHH
Confidence 7777443332 2223333445777777777654
No 32
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.84 E-value=1.2e-07 Score=53.49 Aligned_cols=113 Identities=12% Similarity=-0.022 Sum_probs=90.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC--Ccc----HHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGV--EYY----PVSHIGVL 72 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~--~p~----~~~~~~ll 72 (118)
|..+...+...|++++|...|++.. ..+...+..+...+...|++++|...|++..+..- .++ ...+..+.
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la 86 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG 86 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHH
Confidence 4566778899999999999998764 34778889999999999999999999999976421 122 67888899
Q ss_pred HHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 73 TACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
..+.+.|++++|.+.|++..+. .|+......+-.+....++.
T Consensus 87 ~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 87 NSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999775 35677777776666555443
No 33
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-07 Score=52.84 Aligned_cols=111 Identities=11% Similarity=0.005 Sum_probs=90.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+.+.|++++|...|++.. ..+...|..+...+...|++++|.+.|++..+.. +.+...+..+...+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~ 97 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKGYTRKAAALEAM 97 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHH
Confidence 4566778899999999999999764 3477889999999999999999999999998753 33678888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
|++++|.+.+++..+.. +.+...+..+..++.+.|
T Consensus 98 ~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 98 KDYTKAMDVYQKALDLD-SSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp TCHHHHHHHHHHHHHHC-GGGTHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHhc
Confidence 99999999999987653 224566777777776655
No 34
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.83 E-value=4.4e-08 Score=65.04 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=95.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...|.+.|++++|+..|++.. ..+..+|..+...|...|++++|...|++..+.. +.+...+..+...+.+.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQ-PGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHC
Confidence 5567888999999999999999775 4478899999999999999999999999998752 23588899999999999
Q ss_pred CChhhHHHHHHHHhhcCCC-----------ccHHHHHHHHHHHHHccccc
Q 046694 79 GLVEKGKKFFDEMQARNVK-----------PTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~-----------~~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|...|++..+..-. .+...|..+-.++...|+.+
T Consensus 295 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 295 GAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 9999999999998553211 13678899999988887654
No 35
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.82 E-value=1.6e-07 Score=53.08 Aligned_cols=92 Identities=15% Similarity=0.180 Sum_probs=78.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+...|++++|..+|++.. ..+...+..+...+...|++++|.+.++++.+.. +.+...+..+...+.+.
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~ 116 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHH
Confidence 4556778889999999999999775 3467788899999999999999999999998753 33677888899999999
Q ss_pred CChhhHHHHHHHHhhc
Q 046694 79 GLVEKGKKFFDEMQAR 94 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~ 94 (118)
|++++|.+.++++.+.
T Consensus 117 ~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 117 GDYDEAIEYYQKALEL 132 (136)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHcc
Confidence 9999999999998664
No 36
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.81 E-value=9.6e-08 Score=60.66 Aligned_cols=111 Identities=18% Similarity=0.170 Sum_probs=83.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+..+|...|++++|...|++.. ..+...|..+...|...|++++|.+.|++..+.. +.+...+..+...+.+.
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD-PTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-ccccHHHHHHHHHHHHh
Confidence 4566778888999999999998764 3467888889999999999999999999987752 23577888888899999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
|++++|.+.++++.+.. |+.......+..+.+.|+
T Consensus 125 g~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~ 159 (275)
T 1xnf_A 125 GRDKLAQDDLLAFYQDD--PNDPFRSLWLYLAEQKLD 159 (275)
T ss_dssp TCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHhcC
Confidence 99999999999987643 443333333334444444
No 37
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.78 E-value=1.2e-07 Score=61.62 Aligned_cols=111 Identities=14% Similarity=0.030 Sum_probs=57.9
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC--------CCccHHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDG--------VEYYPVSHIGVLT 73 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~--------~~p~~~~~~~ll~ 73 (118)
+...|...|++++|...|++.. ..+...+..+...+...|++++|...|++..+.. .+.....+..+..
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~ 244 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGH 244 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHH
Confidence 3444555555555555555442 2244555555556666666666666665554321 0222345555555
Q ss_pred HHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 74 ACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.+.+.|++++|...+++..+.. +.+...+..+..+|.+.|+.
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~ 286 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLI-PQNASTYSAIGYIHSLMGNF 286 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCHHHHHHHHHHHHhhC-ccchHHHHHHHHHHHHhccH
Confidence 5666666666666666554432 22345555555555555544
No 38
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3e-07 Score=57.65 Aligned_cols=114 Identities=8% Similarity=-0.045 Sum_probs=87.2
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----------------------------CCHhhHHHHHHHHHhcCCHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----------------------------KDSASWITLILGYGMLGELDVAINL 52 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----------------------------~~~~~~~~li~~~~~~~~~~~a~~~ 52 (118)
|..+..+|.+.|++++|...|++... .+...|..+...+...|++++|...
T Consensus 82 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 161 (258)
T 3uq3_A 82 FARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKA 161 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34566677788888888888776532 2455777888888888999999999
Q ss_pred HHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 53 FEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 53 ~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|++..+.. +.+...+..+...+.+.|++++|.+.+++..+.. +.+...+..+-.+|.+.|+.+
T Consensus 162 ~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~ 224 (258)
T 3uq3_A 162 YTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATAQIAVKEYA 224 (258)
T ss_dssp HHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhHH
Confidence 99987653 3367788888888899999999999999887653 335777888888888888754
No 39
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.77 E-value=1.3e-07 Score=61.46 Aligned_cols=114 Identities=14% Similarity=0.045 Sum_probs=67.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+..+|...|++++|...|++.. ..+...+..+...|...|++++|.+.|++..+.. +.+...+..+...+.+.|
T Consensus 129 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 129 IAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcc
Confidence 345556666666666666666543 2234455556666666666777777666665542 234566666666777777
Q ss_pred ChhhHHHHHHHHhhcC--------CCccHHHHHHHHHHHHHccccc
Q 046694 80 LVEKGKKFFDEMQARN--------VKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g--------~~~~~~t~~~li~~~~~~g~~~ 117 (118)
++++|...+++..+.. ......++..+..+|.+.|+.+
T Consensus 208 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 253 (330)
T 3hym_B 208 EWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYA 253 (330)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHH
Confidence 7777777776664421 1223456666666666666543
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.76 E-value=5.6e-07 Score=51.82 Aligned_cols=102 Identities=10% Similarity=0.058 Sum_probs=84.0
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
...-..|.+.|++++|+..|++.. ..+...|..+-..|.+.|++++|+..|++..+.. +.+...|..+-.++...|
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~ 95 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLD-SKFIKGYIRKAACLVAMR 95 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHCC
Confidence 445678899999999999999764 4588899999999999999999999999998753 236788999999999999
Q ss_pred ChhhHHHHHHHHhhcCCCcc-HHHHHHHH
Q 046694 80 LVEKGKKFFDEMQARNVKPT-ETHYACMV 107 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~~-~~t~~~li 107 (118)
++++|.+.|++..+. .|+ ......|-
T Consensus 96 ~~~~A~~~~~~al~l--~P~~~~a~~~l~ 122 (126)
T 4gco_A 96 EWSKAQRAYEDALQV--DPSNEEAREGVR 122 (126)
T ss_dssp CHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--CcCCHHHHHHHH
Confidence 999999999999774 443 44444443
No 41
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.76 E-value=4.1e-07 Score=60.10 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=68.7
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+...+.+.|++++|...|++.. ..+...|..+...+...|++++|.+.|++..+.. +.+...+..+...+...|
T Consensus 68 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g 146 (368)
T 1fch_A 68 FEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNES 146 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcC
Confidence 345667778888888888888764 3466778888888888888888888888887653 336777788888888888
Q ss_pred ChhhHHHHHHHHhhc
Q 046694 80 LVEKGKKFFDEMQAR 94 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~ 94 (118)
++++|.+.++++.+.
T Consensus 147 ~~~~A~~~~~~~~~~ 161 (368)
T 1fch_A 147 LQRQACEILRDWLRY 161 (368)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHh
Confidence 888888888776553
No 42
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.73 E-value=6.2e-07 Score=54.07 Aligned_cols=115 Identities=11% Similarity=0.027 Sum_probs=72.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-----------------
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGV----------------- 61 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~----------------- 61 (118)
|..|-..|.+.|++++|+..|++.. +.+...|..+-..|.+.|++++|...+++......
T Consensus 8 y~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (184)
T 3vtx_A 8 YMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMID 87 (184)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcC
Confidence 4556677777788888887777653 33566666666777777777777766666543211
Q ss_pred ---------------Cc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 62 ---------------EY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 62 ---------------~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
.| +...+..+-..+.+.|++++|.+.|++..+.. +.+...|..+-.+|.+.|+.+
T Consensus 88 ~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 88 EKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHHHHHCCCHH
Confidence 11 34445555666666677777777777765542 224566667777777766654
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.73 E-value=3e-07 Score=67.20 Aligned_cols=112 Identities=9% Similarity=0.019 Sum_probs=61.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~ 77 (118)
|+.|-.+|.+.|++++|+..|++.. ..+...|+.+-..|.+.|++++|+..|++..+. .| +...|..+-..+.+
T Consensus 12 l~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--~P~~~~a~~nLg~~l~~ 89 (723)
T 4gyw_A 12 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--SPTFADAYSNMGNTLKE 89 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 3455556666666666666665443 224555566666666666666666666665543 23 34555555555556
Q ss_pred CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 78 GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.|++++|.+.|++..+.. +-+...|+.+-.+|.+.|++
T Consensus 90 ~g~~~~A~~~~~kAl~l~-P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 90 MQDVQGALQCYTRAIQIN-PAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred cCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCH
Confidence 666666666665554432 11344555555555555544
No 44
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.73 E-value=7e-07 Score=49.00 Aligned_cols=94 Identities=10% Similarity=-0.024 Sum_probs=80.0
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc--cHHHHHHHHHHHh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY--YPVSHIGVLTACS 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p--~~~~~~~ll~~~~ 76 (118)
|..+...+.+.|++++|...|++.. ..+...|..+-..+...|++++|...|++..+.. +. +...+..+...+.
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVI-EDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccchHHHHHHHHHHHH
Confidence 5567788899999999999998764 4477888999999999999999999999998753 22 5788899999999
Q ss_pred cC-CChhhHHHHHHHHhhcCC
Q 046694 77 LG-GLVEKGKKFFDEMQARNV 96 (118)
Q Consensus 77 ~~-~~~~~a~~~~~~m~~~g~ 96 (118)
+. |++++|.+.+++..+..-
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 88 YIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp TCSSCSHHHHHHHHHHGGGCC
T ss_pred HHhCCHHHHHHHHHHHhhccc
Confidence 99 999999999999977543
No 45
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.2e-07 Score=58.32 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=94.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC--C-C-------HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC-----------
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV--K-D-------SASWITLILGYGMLGELDVAINLFEAMREDG----------- 60 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~--~-~-------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~----------- 60 (118)
|..+..+|.+.|++++|...|++... | + ...|..+...+...|++++|...|++..+..
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 120 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRN 120 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhH
Confidence 45667788999999999999987652 2 1 5789999999999999999999999998732
Q ss_pred -------------CCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 61 -------------VEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 61 -------------~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
..| +...+..+...+...|++++|.+.+++..+.. +.+...+..+..+|.+.|+++
T Consensus 121 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~ 190 (258)
T 3uq3_A 121 AEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFP 190 (258)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHhCCHH
Confidence 233 46678888899999999999999999997754 336788999999999988765
No 46
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.69 E-value=9.4e-07 Score=51.99 Aligned_cols=113 Identities=9% Similarity=-0.015 Sum_probs=87.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+...|++++|...|++.. ..+...|..+...+...|++++|...|++..+.. +.+...+..+-..+.+.
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~ 94 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMAL 94 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHh
Confidence 4456678889999999999998764 3478889999999999999999999999998753 33677888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHH--HHHHHHHHHcccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHY--ACMVYLLIKYNQK 116 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~--~~li~~~~~~g~~ 116 (118)
|++++|...+++..+.... +...+ -.+...+.+.|++
T Consensus 95 ~~~~~A~~~~~~a~~~~p~-~~~~~~~~~~~~~~~~~~~~ 133 (166)
T 1a17_A 95 GKFRAALRDYETVVKVKPH-DKDAKMKYQECNKIVKQKAF 133 (166)
T ss_dssp TCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999775422 33344 3333335555554
No 47
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.68 E-value=1.2e-06 Score=52.79 Aligned_cols=94 Identities=17% Similarity=0.133 Sum_probs=72.9
Q ss_pred HHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 6 LDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
...+...++++.|...+++.. ..+...+..+-..|.+.|++++|++.|++..+.. +-+...|..+-.++.+.|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHHHHHCCCHH
Confidence 344555666666666665443 3367788899999999999999999999998753 336788999999999999999
Q ss_pred hHHHHHHHHhhcCCCccHHH
Q 046694 83 KGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 83 ~a~~~~~~m~~~g~~~~~~t 102 (118)
+|.+.|++..+. .|+...
T Consensus 159 ~A~~~~~~al~~--~p~~a~ 176 (184)
T 3vtx_A 159 EAVKYFKKALEK--EEKKAK 176 (184)
T ss_dssp HHHHHHHHHHHT--THHHHH
T ss_pred HHHHHHHHHHhC--CccCHH
Confidence 999999998774 455433
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.68 E-value=8.5e-07 Score=64.86 Aligned_cols=114 Identities=6% Similarity=0.010 Sum_probs=98.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~ 77 (118)
|+.|-.+|.+.|++++|+..|++.. ..+...|..+-..|...|++++|++.|++..+. .| +...|+.+-..+.+
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--~P~~~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--NPAFADAHSNLASIHKD 123 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 5677889999999999999999764 447889999999999999999999999998875 34 57889999999999
Q ss_pred CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccccC
Q 046694 78 GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~~ 118 (118)
.|++++|.+.|++..+.. +-+...+..+..+|.+.|++++
T Consensus 124 ~g~~~eAi~~~~~Al~l~-P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 124 SGNIPEAIASYRTALKLK-PDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp TTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHHHHHhC-CCChHHHhhhhhHHHhcccHHH
Confidence 999999999999997753 2257889999999999998764
No 49
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.68 E-value=3.2e-07 Score=54.28 Aligned_cols=109 Identities=15% Similarity=0.060 Sum_probs=74.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGG 79 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~ 79 (118)
.+-.+|.+.|++++|+..|++.. ..+...|..+-..|.+.|++++|...|++..+. .| +...+..+-..+.+.|
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~~ 113 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVEL--NPTQKDLVLKIAELLCKND 113 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcC
Confidence 35567778888888888887654 347777888888888888888888888887664 34 4667777777778888
Q ss_pred ChhhHHHH-HHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 80 LVEKGKKF-FDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 80 ~~~~a~~~-~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
+.+++.+. +++..+.. +-++..|...-..+.+.|+
T Consensus 114 ~~~~aa~~~~~~al~l~-P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 114 VTDGRAKYWVERAAKLF-PGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp SSSSHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTCCC
T ss_pred ChHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHhCc
Confidence 87765554 46665532 2245666666666665553
No 50
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.68 E-value=4e-07 Score=54.32 Aligned_cols=92 Identities=15% Similarity=0.052 Sum_probs=78.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+-..+.+.|++++|+..|++.. ..+...|..+-..|...|++++|+..|++..+.. +-+...|..+-.++.+.|
T Consensus 40 ~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-P~~~~~~~~lg~~~~~lg 118 (151)
T 3gyz_A 40 YSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG-KNDYTPVFHTGQCQLRLK 118 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-SSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-CCCcHHHHHHHHHHHHcC
Confidence 345567889999999999999775 3478899999999999999999999999998753 225788889999999999
Q ss_pred ChhhHHHHHHHHhhcC
Q 046694 80 LVEKGKKFFDEMQARN 95 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g 95 (118)
++++|...|++..+..
T Consensus 119 ~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 119 APLKAKECFELVIQHS 134 (151)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999997754
No 51
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.68 E-value=6.9e-07 Score=56.72 Aligned_cols=112 Identities=12% Similarity=0.037 Sum_probs=85.5
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc--HHHHHHHHHHHhcCC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY--PVSHIGVLTACSLGG 79 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~ll~~~~~~~ 79 (118)
....+.+.|++++|+..|++.. ..+...|..+...|...|++++|.+.|++..+.+-.|+ ...|..+-..+...|
T Consensus 9 ~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~ 88 (272)
T 3u4t_A 9 YADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKG 88 (272)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcc
Confidence 4567778899999999998764 33566888888889999999999999999877432222 334788888888999
Q ss_pred ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 80 LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
++++|.+.|++..+.. +.+...+..+-.+|.+.|+++
T Consensus 89 ~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~ 125 (272)
T 3u4t_A 89 QDSLAIQQYQAAVDRD-TTRLDMYGQIGSYFYNKGNFP 125 (272)
T ss_dssp CHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHccCHH
Confidence 9999999999887643 235678888888888888764
No 52
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.67 E-value=1.2e-06 Score=51.71 Aligned_cols=110 Identities=13% Similarity=-0.015 Sum_probs=89.1
Q ss_pred HHHHHhcCCHHHHHHHhhhCCCC---CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 6 LDFYTRTGRIDLANKIFDRLPVK---DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~~~---~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
-..+...|++++|+..+++.... +...+-.+-..|.+.|++++|.+.|++..+.. +-+...|..+-.++.+.|+++
T Consensus 4 G~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 4 GSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-ERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ---CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCchH
Confidence 34556678999999999877633 55667778899999999999999999998753 226889999999999999999
Q ss_pred hHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 83 KGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 83 ~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+|...|++..+.. +-+...+..+-.+|.+.|+.+
T Consensus 83 ~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 83 KAVECYRRSVELN-PTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCChH
Confidence 9999999998753 225788999999999988765
No 53
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.67 E-value=7.6e-07 Score=51.22 Aligned_cols=103 Identities=8% Similarity=-0.059 Sum_probs=81.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC--CCcc----HHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDG--VEYY----PVSHIGVL 72 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~--~~p~----~~~~~~ll 72 (118)
+..|-..+.+.|++++|+..|++.. ..+...|+.+-..|.+.|++++|++.|++..+.. ..++ ..+|..+-
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 4556778999999999999998764 4578899999999999999999999999986531 1111 24677778
Q ss_pred HHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHH
Q 046694 73 TACSLGGLVEKGKKFFDEMQARNVKPTETHYACM 106 (118)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~l 106 (118)
.++...|++++|.+.|++..+ ..||+.+...|
T Consensus 91 ~~~~~~~~~~~A~~~~~kal~--~~~~~~~~~~l 122 (127)
T 4gcn_A 91 NAFQKQNDLSLAVQWFHRSLS--EFRDPELVKKV 122 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH--HSCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHh--hCcCHHHHHHH
Confidence 888999999999999999876 35666655444
No 54
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.66 E-value=1.4e-07 Score=59.86 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=93.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-----------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc------CC-Cc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-----------VKDSASWITLILGYGMLGELDVAINLFEAMRED------GV-EY 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-----------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~------~~-~p 63 (118)
|..+...|...|++++|...|++.. .....+|..+-..|...|++++|.+.|++..+. .- +.
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 125 (283)
T 3edt_B 46 LNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD 125 (283)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 4567788899999999999998664 124568889999999999999999999998654 11 23
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhc------CCCc-cHHHHHHHHHHHHHccccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQAR------NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~------g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
....+..+-..+...|++++|..++++..+. +-.| ...++..+-.+|.+.|+.+
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 186 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQ 186 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 5678888999999999999999999998664 2233 4678888999999988765
No 55
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.65 E-value=3.1e-06 Score=46.71 Aligned_cols=104 Identities=11% Similarity=0.016 Sum_probs=83.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+...|++++|...|++.. ..+...+..+...+...|++++|...+++..+.. +.+...+..+...+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHH
Confidence 4456778889999999999999764 3477888999999999999999999999998753 23577888899999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHH
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMV 107 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li 107 (118)
|++++|.+.+++..+... .+...+..+-
T Consensus 86 ~~~~~A~~~~~~~~~~~~-~~~~~~~~l~ 113 (118)
T 1elw_A 86 NRFEEAKRTYEEGLKHEA-NNPQLKEGLQ 113 (118)
T ss_dssp TCHHHHHHHHHHHHTTCT-TCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCC-CCHHHHHHHH
Confidence 999999999999876532 2344444443
No 56
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1e-06 Score=60.49 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=87.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
.+-..+.+.|++++|+..|+++. .|+...|..+...+.+.|++++|...|+++.+.. +.+...+..+..++.+.|++
T Consensus 11 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~ 89 (514)
T 2gw1_A 11 DKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELK-PDYSKVLLRRASANEGLGKF 89 (514)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHHhhH
Confidence 45567889999999999999886 5899999999999999999999999999998764 33678899999999999999
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLL 110 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~ 110 (118)
++|...|+++.+.+- ++......++..+
T Consensus 90 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~ 117 (514)
T 2gw1_A 90 ADAMFDLSVLSLNGD-FNDASIEPMLERN 117 (514)
T ss_dssp HHHHHHHHHHHHSSS-CCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CccchHHHHHHHH
Confidence 999999999987663 3444444444433
No 57
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.62 E-value=2.4e-07 Score=59.68 Aligned_cols=92 Identities=11% Similarity=0.108 Sum_probs=75.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC----------C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCc-
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV----------K-DSASWITLILGYGMLGELDVAINLFEAMRED------GVEY- 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~----------~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~------~~~p- 63 (118)
|..+...|...|++++|...|++... + ....+..+...+...|++++|.+.|++..+. +-.|
T Consensus 114 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 193 (311)
T 3nf1_A 114 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN 193 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 45677888999999999999987641 2 4557888889999999999999999999764 2233
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
...++..+...+.+.|++++|.+.+++..+
T Consensus 194 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 194 VAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456788899999999999999999999865
No 58
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2.1e-06 Score=48.71 Aligned_cols=93 Identities=13% Similarity=0.019 Sum_probs=79.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+-..+.+.|++++|+..|++.. ..+...|..+-..+.+.|++++|+..|++..+.. +-+...|..+-.++...
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATAQIAV 85 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHH
Confidence 3455678889999999999998764 4478899999999999999999999999998753 23578888999999999
Q ss_pred CChhhHHHHHHHHhhcC
Q 046694 79 GLVEKGKKFFDEMQARN 95 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g 95 (118)
|++++|...|++..+..
T Consensus 86 ~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 86 KEYASALETLDAARTKD 102 (126)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHhC
Confidence 99999999999986643
No 59
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.61 E-value=2.4e-07 Score=58.72 Aligned_cols=92 Identities=11% Similarity=0.092 Sum_probs=76.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC----------C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCc-
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV----------K-DSASWITLILGYGMLGELDVAINLFEAMRED------GVEY- 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~----------~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~------~~~p- 63 (118)
|..+..+|...|++++|...|++... | ...+|..+-..|...|++++|...|++..+. +-.|
T Consensus 88 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 167 (283)
T 3edt_B 88 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPN 167 (283)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 45677889999999999999987641 2 4568888999999999999999999999764 2133
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
...++..+...+.+.|++++|..++++..+
T Consensus 168 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 197 (283)
T 3edt_B 168 VAKTKNNLASCYLKQGKYQDAETLYKEILT 197 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888899999999999999999999855
No 60
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.60 E-value=4.2e-06 Score=49.71 Aligned_cols=110 Identities=8% Similarity=-0.070 Sum_probs=86.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+-..+.+.|++++|+..|++.. ..+...|..+-..|.+.|++++|+..|++..+.. +-+...|..+-.++.+.
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-PKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHc
Confidence 3456678889999999999999765 3478899999999999999999999999998763 23588899999999999
Q ss_pred CChhhHHHHHHHHhhcCC-CccHHHHHHHHHHHHH
Q 046694 79 GLVEKGKKFFDEMQARNV-KPTETHYACMVYLLIK 112 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~-~~~~~t~~~li~~~~~ 112 (118)
|++++|.+.|++..+..- .++......+..+..+
T Consensus 93 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 127 (164)
T 3sz7_A 93 ADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRK 127 (164)
T ss_dssp TCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 999999999999866432 2233334444444443
No 61
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.60 E-value=1.1e-06 Score=57.37 Aligned_cols=77 Identities=9% Similarity=-0.037 Sum_probs=42.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 38 LGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 38 ~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
..+...|++++|.+.|++..+.. +.+...+..+...+.+.|++++|...+++..+.. +.+..++..+..+|.+.|+.
T Consensus 128 ~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~ 204 (359)
T 3ieg_A 128 LDAFDGADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLK-SDNTEAFYKISTLYYQLGDH 204 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-SCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCH
Confidence 44555555555555555554432 2244555555666666666666666666665432 23455566666666655554
No 62
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.58 E-value=6.5e-07 Score=57.61 Aligned_cols=116 Identities=13% Similarity=0.076 Sum_probs=92.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-----------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCc-
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-----------VKDSASWITLILGYGMLGELDVAINLFEAMRED------GVEY- 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-----------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~------~~~p- 63 (118)
+..+...|...|++++|...|++.. ......+..+...|...|++++|.+.|++..+. +-.|
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD 151 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH
Confidence 4567778899999999999998664 114568888999999999999999999999754 2233
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhc------CCCc-cHHHHHHHHHHHHHccccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQAR------NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~------g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
....+..+...+...|++++|.+++++..+. +..| ...++..+..+|.+.|+.+
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 212 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK 212 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 4567888899999999999999999998664 2233 3567888999999988765
No 63
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.57 E-value=4.4e-06 Score=47.76 Aligned_cols=110 Identities=7% Similarity=-0.100 Sum_probs=86.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+...+.+.|++++|...|++.. ..+...|..+-..+...|++++|...|++..+.. +-+...+..+-.++...
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHH
Confidence 3456678889999999999998764 4477889999999999999999999999998753 23678889999999999
Q ss_pred CChhhHHHHHHHHhhcC----CCccHHHHHHHHHHHHH
Q 046694 79 GLVEKGKKFFDEMQARN----VKPTETHYACMVYLLIK 112 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g----~~~~~~t~~~li~~~~~ 112 (118)
|+++.|...|++..+.. ...+......+..+..+
T Consensus 91 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 91 ESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985432 22345555555555443
No 64
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.57 E-value=5e-06 Score=49.02 Aligned_cols=91 Identities=15% Similarity=0.027 Sum_probs=77.4
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+-..+.+.|++++|+..|++.. ..+...|..+-..|...|++++|...|++..+.. +-+...+..+-.++...|
T Consensus 25 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g 103 (148)
T 2vgx_A 25 YSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD-IXEPRFPFHAAECLLQXG 103 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHcC
Confidence 345667889999999999999764 4488889999999999999999999999997753 236778888999999999
Q ss_pred ChhhHHHHHHHHhhc
Q 046694 80 LVEKGKKFFDEMQAR 94 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~ 94 (118)
++++|.+.|++..+.
T Consensus 104 ~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 104 ELAEAESGLFLAQEL 118 (148)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999998664
No 65
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.57 E-value=5.1e-07 Score=58.49 Aligned_cols=107 Identities=9% Similarity=-0.021 Sum_probs=91.7
Q ss_pred HHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHH
Q 046694 9 YTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGK 85 (118)
Q Consensus 9 ~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~ 85 (118)
+...|++++|...|++.. ..+...+..+...+...|++++|.+.+++..+.. +.+...+..+...+.+.|++++|.
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~ 226 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELR-PDDAQLWNKLGATLANGNRPQEAL 226 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHH
Confidence 677889999999998875 3478899999999999999999999999998753 336788999999999999999999
Q ss_pred HHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 86 KFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 86 ~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+.+++..+.. +.+...+..+..+|.+.|+.+
T Consensus 227 ~~~~~a~~~~-~~~~~~~~~l~~~~~~~g~~~ 257 (327)
T 3cv0_A 227 DAYNRALDIN-PGYVRVMYNMAVSYSNMSQYD 257 (327)
T ss_dssp HHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHHhccHH
Confidence 9999997753 336788999999999988765
No 66
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.55 E-value=7.7e-07 Score=61.58 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=69.7
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
.+...|.+.|++++|...|++.. ..+..+|..+...+...|++++|...|++..+.. +-+...+..+...+.+.|+
T Consensus 281 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~ 359 (537)
T 3fp2_A 281 FLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLN-PENVYPYIQLACLLYKQGK 359 (537)
T ss_dssp HHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCC
Confidence 34455556666666666666553 2355666667777777777777777777766542 1234566666677777777
Q ss_pred hhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 81 VEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+++|...+++..+.. +.+...+..+..++.+.|+++
T Consensus 360 ~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~ 395 (537)
T 3fp2_A 360 FTESEAFFNETKLKF-PTLPEVPTFFAEILTDRGDFD 395 (537)
T ss_dssp HHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHH
Confidence 777777777765542 234556666666666666543
No 67
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.54 E-value=2.7e-06 Score=57.89 Aligned_cols=114 Identities=10% Similarity=0.026 Sum_probs=76.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCC-HHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGE-LDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~-~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
|+.+-.++.+.|++++|+..|++.. ..+...|+.+-..+...|+ +++|+..|++..+.. +-+...|..+-.++.+
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHH
Confidence 3445566677777888887777654 3366677777777777775 888888887776642 1256667777777777
Q ss_pred CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 78 GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
.|++++|...|++..+.. +-+...|..+-.++.+.|+++
T Consensus 179 ~g~~~eAl~~~~kal~ld-P~~~~a~~~lg~~~~~~g~~~ 217 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQD-AKNYHAWQHRQWVIQEFKLWD 217 (382)
T ss_dssp HTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCT
T ss_pred ccCHHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcCChH
Confidence 777777777777776643 224666666666666666654
No 68
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.54 E-value=2.5e-06 Score=49.72 Aligned_cols=90 Identities=18% Similarity=0.026 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
.+-..+.+.|++++|+..|++.. ..+...|..+-..+...|++++|...|++..+.. +-+...+..+-.++...|+
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD-INEPRFPFHAAECHLQLGD 101 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCC
Confidence 34567788999999999999764 3478889999999999999999999999998763 2366778888999999999
Q ss_pred hhhHHHHHHHHhhc
Q 046694 81 VEKGKKFFDEMQAR 94 (118)
Q Consensus 81 ~~~a~~~~~~m~~~ 94 (118)
+++|.+.|++..+.
T Consensus 102 ~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 102 LDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998664
No 69
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.54 E-value=7.2e-07 Score=56.57 Aligned_cols=106 Identities=11% Similarity=-0.033 Sum_probs=89.4
Q ss_pred HhcCCHHHHHHHhhhCCC-------CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 10 TRTGRIDLANKIFDRLPV-------KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~~-------~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
...|++++|+..|+++.. .+...|..+...+...|++++|...|++..+.. +.+...+..+...+...|+++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHccCHH
Confidence 345789999999987753 156789999999999999999999999998753 336889999999999999999
Q ss_pred hHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 83 KGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 83 ~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+|.+.|++..+.. +.+...+..+..+|.+.|+.+
T Consensus 95 ~A~~~~~~al~~~-~~~~~~~~~la~~~~~~g~~~ 128 (275)
T 1xnf_A 95 AAYEAFDSVLELD-PTYNYAHLNRGIALYYGGRDK 128 (275)
T ss_dssp HHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhcC-ccccHHHHHHHHHHHHhccHH
Confidence 9999999997753 335788999999999988865
No 70
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.53 E-value=2.8e-06 Score=54.30 Aligned_cols=102 Identities=10% Similarity=0.000 Sum_probs=57.7
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCCC-CHhhHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc--
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPVK-DSASWITLILGYGM----LGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL-- 77 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~~-~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~-- 77 (118)
+-..|.+.|++++|...|++...+ +...+..+-..|.. .+++++|.+.|++..+.+ +...+..+-..|..
T Consensus 12 lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~ 88 (273)
T 1ouv_A 12 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQ 88 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTS
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCC
Confidence 344555566666666666554322 44455555555665 666666666666665544 44555555555555
Q ss_pred --CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 046694 78 --GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK 112 (118)
Q Consensus 78 --~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~ 112 (118)
.+++++|.+.|++..+.+ +...+..+-..|.+
T Consensus 89 ~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 89 GVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHD 122 (273)
T ss_dssp SSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHc
Confidence 666666666666665543 44555555555554
No 71
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.51 E-value=2.8e-06 Score=56.55 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=93.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC--CC-C---------------HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP--VK-D---------------SASWITLILGYGMLGELDVAINLFEAMREDGVEY 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~--~~-~---------------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p 63 (118)
|..+-..|.+.|++++|+..|++.. .| + ...|..+-..|.+.|++++|+..|++..+.. +.
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~ 228 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD-SN 228 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC
Confidence 4456678889999999999998764 23 3 5889999999999999999999999998753 33
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+...+..+-.++...|++++|...|++..+.. +.+...+..+-.++.+.|+.+
T Consensus 229 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 229 NEKGLSRRGEAHLAVNDFELARADFQKVLQLY-PNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999997753 235677888888888777653
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.51 E-value=6.6e-07 Score=62.19 Aligned_cols=69 Identities=14% Similarity=0.006 Sum_probs=29.1
Q ss_pred HHHhcCCH-HHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 8 FYTRTGRI-DLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 8 ~~~~~~~~-~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
.|...|++ ++|+..|++.. ..+...|..+-..|...|++++|.+.|++..+. .|+...+..+-..+...
T Consensus 111 ~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 111 ALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH--CKNKVSLQNLSMVLRQL 183 (474)
T ss_dssp HHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--CCCHHHHHHHHHHHTTC
T ss_pred HHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCHHHHHHHHHHHHHh
Confidence 33444444 44444444332 123344444444444444444444444444332 23334444444444444
No 73
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.50 E-value=6.5e-06 Score=51.20 Aligned_cols=112 Identities=9% Similarity=-0.095 Sum_probs=87.5
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---C-CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---V-KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~-~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
..+-..+.+.|++++|+..|++.. . ++...+..+-..+...|++++|.+.|++..+.. +-+...+..+-..+.+.
T Consensus 11 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 11 KNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN-YNLANAYIGKSAAYRDM 89 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHHHHHHHHHHHc
Confidence 345567889999999999998764 3 677788888999999999999999999998753 22677888999999999
Q ss_pred CChhhHHHHHHHHhhcCCCccH-------HHHHHHHHHHHHcccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTE-------THYACMVYLLIKYNQK 116 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~-------~t~~~li~~~~~~g~~ 116 (118)
|++++|...+++..+... .+. ..|..+-.++.+.|+.
T Consensus 90 ~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~g~~~~~~~~~ 133 (228)
T 4i17_A 90 KNNQEYIATLTEGIKAVP-GNATIEKLYAIYYLKEGQKFQQAGNI 133 (228)
T ss_dssp TCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHhHHHHHhccH
Confidence 999999999999977432 234 3455555555555554
No 74
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.50 E-value=8.7e-07 Score=60.83 Aligned_cols=111 Identities=8% Similarity=-0.003 Sum_probs=55.8
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-cc----HHHHHHHHHHHh
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVE-YY----PVSHIGVLTACS 76 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p~----~~~~~~ll~~~~ 76 (118)
+...|.+.|++++|...|++.. ..+...|..+...+...|++++|...|+++.+..-. ++ ...+..+...+.
T Consensus 344 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 423 (514)
T 2gw1_A 344 LACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT 423 (514)
T ss_dssp HHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh
Confidence 3444455555555555555442 223445555555555555666665555555432100 11 225555555555
Q ss_pred c---CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 77 L---GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 77 ~---~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+ .|++++|.+.+++..+.. +.+..++..+..+|.+.|+.
T Consensus 424 ~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~ 465 (514)
T 2gw1_A 424 RNPTVENFIEATNLLEKASKLD-PRSEQAKIGLAQMKLQQEDI 465 (514)
T ss_dssp TSCCTTHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred hhhhcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhcCH
Confidence 5 566666666666554432 22345555555555555544
No 75
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.49 E-value=3.5e-06 Score=55.02 Aligned_cols=86 Identities=8% Similarity=0.023 Sum_probs=37.5
Q ss_pred HHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 6 LDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
...+.+.|++++|..+|++.. ..+...|..+...+...|++++|...|++..+.. +-+...+..+...+.+.|+++
T Consensus 10 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 88 (359)
T 3ieg_A 10 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK-MDFTAARLQRGHLLLKQGKLD 88 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHcCChH
Confidence 334444455555555554432 1233444444444444444444444444444321 113344444444444444444
Q ss_pred hHHHHHHHHh
Q 046694 83 KGKKFFDEMQ 92 (118)
Q Consensus 83 ~a~~~~~~m~ 92 (118)
+|...+++..
T Consensus 89 ~A~~~~~~~~ 98 (359)
T 3ieg_A 89 EAEDDFKKVL 98 (359)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 76
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.49 E-value=1.2e-06 Score=60.60 Aligned_cols=113 Identities=15% Similarity=0.031 Sum_probs=95.1
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
..+...+...|++++|...|++.. .|+...|..+...+...|++++|.+.|++..+.. +.+..++..+...+...|+
T Consensus 247 ~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ 325 (537)
T 3fp2_A 247 CYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLN-PEYPPTYYHRGQMYFILQD 325 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHhcCC
Confidence 344567788899999999999875 5667889999999999999999999999998753 3367889999999999999
Q ss_pred hhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 81 VEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+++|.+.+++..+.. +.+...+..+..+|.+.|+++
T Consensus 326 ~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~ 361 (537)
T 3fp2_A 326 YKNAKEDFQKAQSLN-PENVYPYIQLACLLYKQGKFT 361 (537)
T ss_dssp HHHHHHHHHHHHHHC-TTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHH
Confidence 999999999997754 234678889999999988865
No 77
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.49 E-value=2.1e-06 Score=56.21 Aligned_cols=73 Identities=14% Similarity=0.128 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC-CCc--cHHHHHHHHHHHHHccccc
Q 046694 44 GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN-VKP--TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g-~~~--~~~t~~~li~~~~~~g~~~ 117 (118)
|++++|..+|++..+.. +-+...|..++..+.+.|++++|..+|++..+.. +.| ....|..++..+.+.|+.+
T Consensus 183 ~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~ 258 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLA 258 (308)
T ss_dssp CCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHH
T ss_pred CCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 44444444444443321 1245566666667777777777777777776653 344 3556777777777666543
No 78
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=7.1e-06 Score=47.21 Aligned_cols=106 Identities=8% Similarity=-0.108 Sum_probs=83.0
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC--CCC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP--VKD----SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTAC 75 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~--~~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 75 (118)
|..+...+.+.|++++|...|++.. .|+ ...|..+-..|...|++++|...+++..+.. +.+...+..+-.++
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~ 109 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVKALYRRSQAL 109 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHHHHHHHHHHH
Confidence 3455677889999999999999764 344 6788888999999999999999999987652 23677888888999
Q ss_pred hcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 76 SLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
...|++++|.+.|++..+.. +.+...+..+-..
T Consensus 110 ~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~ 142 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVSLE-PKNKVFQEALRNI 142 (148)
T ss_dssp HHHTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHH
Confidence 99999999999999997753 2234444444443
No 79
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.48 E-value=1.1e-05 Score=49.39 Aligned_cols=109 Identities=11% Similarity=-0.020 Sum_probs=86.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC--------------CCc-
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDG--------------VEY- 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~--------------~~p- 63 (118)
|..+..+|.+.|++++|+..|++.. ..+...|..+-..|...|++++|...|++..+.. ..|
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 119 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLF 119 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEE
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCcc
Confidence 4567788999999999999998764 4477889999999999999999999999998742 122
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~ 110 (118)
....+..+-.++.+.|++++|.+.|++..+..-..........+..+
T Consensus 120 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 120 ACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred chHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 23778888999999999999999999998765444444444444444
No 80
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.46 E-value=1.5e-05 Score=44.96 Aligned_cols=90 Identities=10% Similarity=-0.013 Sum_probs=73.9
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CC-CH---hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc----HHHHHHHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VK-DS---ASWITLILGYGMLGELDVAINLFEAMREDGVEYY----PVSHIGVLT 73 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~-~~---~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~----~~~~~~ll~ 73 (118)
.+...+.+.|++++|...|++.. .| +. ..+..+-..+...|++++|...|++..+.. |+ ...+..+-.
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY--PTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTSTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC--CCCcccHHHHHHHHH
Confidence 34567889999999999999775 33 33 477778889999999999999999998753 32 566788888
Q ss_pred HHhcCCChhhHHHHHHHHhhcC
Q 046694 74 ACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~~g 95 (118)
++.+.|++++|...|++..+..
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHcCCHHHHHHHHHHHHHHC
Confidence 9999999999999999997753
No 81
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.46 E-value=5.1e-06 Score=58.64 Aligned_cols=114 Identities=10% Similarity=-0.110 Sum_probs=93.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+-..|.+.|++++|...|++.. ..+...|..+-..|...|++++|.+.|++..+.. +-+...+..+-..+.+.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAA-PEHPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHc
Confidence 4556778889999999999998764 3467889999999999999999999999997753 23578889999999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHc---cccc
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY---NQKA 117 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~---g~~~ 117 (118)
|++++|.+.+++..+.. +.+...+..+..++.+. |+.+
T Consensus 105 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~g~~~ 145 (568)
T 2vsy_A 105 GQAEAAAAAYTRAHQLL-PEEPYITAQLLNWRRRLCDWRALD 145 (568)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCTTHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhhccccHH
Confidence 99999999999997753 23577888888888888 6543
No 82
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.45 E-value=3.4e-06 Score=55.18 Aligned_cols=114 Identities=12% Similarity=0.057 Sum_probs=86.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC--CC-CHh-hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHh-
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP--VK-DSA-SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACS- 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~--~~-~~~-~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~- 76 (118)
|..+...+.+.|++++|..+|++.. .| +.. .|..+...+.+.|++++|..+|++..+.. +++...|........
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST-TCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 5567778889999999999999765 33 343 79999999999999999999999998753 234444544333322
Q ss_pred cCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 77 LGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 77 ~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
..|+.++|.++|++..+.. +-+...|..++..+.+.|+.+
T Consensus 181 ~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCHH
T ss_pred HcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHH
Confidence 3699999999999986642 336888999999998888764
No 83
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.44 E-value=1.1e-05 Score=49.32 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=88.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCH----------------hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDS----------------ASWITLILGYGMLGELDVAINLFEAMREDGVEY 63 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~----------------~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p 63 (118)
..+-..+.+.|++++|...|++.. ..+. ..|..+-..|.+.|++++|+..+++..+.. +.
T Consensus 42 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~ 120 (198)
T 2fbn_A 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID-KN 120 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cc
Confidence 345567888999999999998664 1222 788888999999999999999999998752 33
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+...+..+-.++...|++++|.+.|++..+.. +-+...+..+..++.+.|+.
T Consensus 121 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 121 NVKALYKLGVANMYFGFLEEAKENLYKAASLN-PNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHH
Confidence 67888889999999999999999999987753 23566777777777666544
No 84
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.43 E-value=7.8e-06 Score=49.18 Aligned_cols=54 Identities=9% Similarity=-0.036 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCc-cHHHHHHHHHHHHHccccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
+...+..+-..+...|++++|...|++..+....+ +...+..+..++...|+.+
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 46777788888889999999999999998765443 3568888999999888765
No 85
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.43 E-value=2.1e-06 Score=59.64 Aligned_cols=98 Identities=6% Similarity=-0.032 Sum_probs=81.8
Q ss_pred CCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCH-HHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHH
Q 046694 13 GRIDLANKIFDRLP---VKDSASWITLILGYGMLGEL-DVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFF 88 (118)
Q Consensus 13 ~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~-~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~ 88 (118)
.+++++...+++.. ..+...|..+-..+...|++ ++|.+.|++..+.. +-+...|..+-..|.+.|++++|.+.|
T Consensus 82 ~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~ 160 (474)
T 4abn_A 82 EEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKGDVTSAHTCF 160 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34677777777653 34788899999999999999 99999999997753 225789999999999999999999999
Q ss_pred HHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 89 DEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 89 ~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
++..+.. |+...+..+-.+|.+.
T Consensus 161 ~~al~~~--p~~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 161 SGALTHC--KNKVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHTTC--CCHHHHHHHHHHHTTC
T ss_pred HHHHhhC--CCHHHHHHHHHHHHHh
Confidence 9998754 6778888888888887
No 86
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.41 E-value=6.1e-06 Score=51.11 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=83.8
Q ss_pred HHHHhcCCHHHHHHHhhhCC--CC-CHhhHHH----------------HHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH
Q 046694 7 DFYTRTGRIDLANKIFDRLP--VK-DSASWIT----------------LILGYGMLGELDVAINLFEAMREDGVEYYPVS 67 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~--~~-~~~~~~~----------------li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~ 67 (118)
..+.+.|++++|+..|++.. .| +...|.. +-..|.+.|++++|...|++..+.. +-+...
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~ 90 (208)
T 3urz_A 12 SAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA-PNNVDC 90 (208)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHH
Confidence 45678899999999999875 33 4455666 8888999999999999999998753 226788
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
+..+-..+...|++++|...|++..+.. +-+...+..+-.+|...|
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLE-ADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHh
Confidence 8999999999999999999999997753 225677777777765544
No 87
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.41 E-value=9.2e-06 Score=48.64 Aligned_cols=93 Identities=4% Similarity=-0.016 Sum_probs=73.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHH-HHhcCCH--HHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILG-YGMLGEL--DVAINLFEAMREDGVEYYPVSHIGVLTAC 75 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~-~~~~~~~--~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 75 (118)
|..+..+|...|++++|...|++.. ..+...|..+-.. +...|++ ++|...|++..+.. +-+...+..+...+
T Consensus 47 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~ 125 (177)
T 2e2e_A 47 WALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALD-SNEITALMLLASDA 125 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhC-CCcHHHHHHHHHHH
Confidence 4556677888999999999998765 3466777777777 7788888 99999999987653 22567788888889
Q ss_pred hcCCChhhHHHHHHHHhhcC
Q 046694 76 SLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g 95 (118)
...|++++|...+++..+..
T Consensus 126 ~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 126 FMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHTTCHHHHHHHHHHHHHTC
T ss_pred HHcccHHHHHHHHHHHHhhC
Confidence 99999999999999987643
No 88
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.39 E-value=6.6e-06 Score=52.12 Aligned_cols=104 Identities=13% Similarity=0.008 Sum_probs=67.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC--CC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV--KD----SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTAC 75 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~--~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 75 (118)
|..+..+|.+.|++++|+..|++... ++ ...|..+-..+...|++++|.+.|++..+.. +-+...+..+-..+
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~ 118 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD-TTRLDMYGQIGSYF 118 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-cccHHHHHHHHHHH
Confidence 34556677777888888777775532 22 2236777777777788888888887776542 22456777777777
Q ss_pred hcCCChhhHHHHHHHHhhcCCCccHHHHHHHH
Q 046694 76 SLGGLVEKGKKFFDEMQARNVKPTETHYACMV 107 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li 107 (118)
...|++++|.+.+++..+. -+.+...+..+-
T Consensus 119 ~~~~~~~~A~~~~~~al~~-~~~~~~~~~~l~ 149 (272)
T 3u4t_A 119 YNKGNFPLAIQYMEKQIRP-TTTDPKVFYELG 149 (272)
T ss_dssp HHTTCHHHHHHHHGGGCCS-SCCCHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHhhc-CCCcHHHHHHHH
Confidence 7777777777777777554 222344454444
No 89
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.39 E-value=2.3e-06 Score=55.72 Aligned_cols=116 Identities=9% Similarity=-0.051 Sum_probs=84.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-------C--CHhhHHHHHHHHHhc-CCHHHHHHHHHHHHHc----CCCcc-HH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-------K--DSASWITLILGYGML-GELDVAINLFEAMRED----GVEYY-PV 66 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-------~--~~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~----~~~p~-~~ 66 (118)
|+.+-.+|.+.|++++|+..|++... + -..+|+.+-..|... |++++|+..|++..+. +-.+. ..
T Consensus 80 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~ 159 (292)
T 1qqe_A 80 YVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNK 159 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHH
Confidence 45667788888999999888876541 1 145788888889886 9999999999988642 11111 35
Q ss_pred HHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccH------HHHHHHHHHHHHccccc
Q 046694 67 SHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE------THYACMVYLLIKYNQKA 117 (118)
Q Consensus 67 ~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~------~t~~~li~~~~~~g~~~ 117 (118)
+++.+-..+.+.|++++|...|++..+....... ..+..+..++...|+.+
T Consensus 160 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 216 (292)
T 1qqe_A 160 CFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV 216 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHH
Confidence 6888889999999999999999998775543322 15667777777777653
No 90
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.39 E-value=7.8e-06 Score=45.40 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=73.1
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
...|..+...+...|++++|.+.|+++.+.. +.+...+..+...+.+.|++++|..+++++.+.. +.+..++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~ 86 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHH
Confidence 5678888899999999999999999998753 3467888899999999999999999999997753 3467888899999
Q ss_pred HHHccccc
Q 046694 110 LIKYNQKA 117 (118)
Q Consensus 110 ~~~~g~~~ 117 (118)
|.+.|+.+
T Consensus 87 ~~~~~~~~ 94 (125)
T 1na0_A 87 YYKQGDYD 94 (125)
T ss_dssp HHHTTCHH
T ss_pred HHHhcCHH
Confidence 99888764
No 91
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.38 E-value=2e-05 Score=50.29 Aligned_cols=102 Identities=11% Similarity=0.006 Sum_probs=54.5
Q ss_pred HHHHHHh----cCCHHHHHHHhhhCC-CCCHhhHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 046694 5 RLDFYTR----TGRIDLANKIFDRLP-VKDSASWITLILGYGM----LGELDVAINLFEAMREDGVEYYPVSHIGVLTAC 75 (118)
Q Consensus 5 ll~~~~~----~~~~~~a~~~~~~m~-~~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~ 75 (118)
+-..|.. .+++++|...|++.. ..+...+..+-..|.. .+++++|.+.|++..+.+ +...+..+-..|
T Consensus 44 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~ 120 (273)
T 1ouv_A 44 LGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIY 120 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHH
Confidence 3444555 566666666665443 2245555555555555 566666666666655543 444555555555
Q ss_pred hc----CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 046694 76 SL----GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK 112 (118)
Q Consensus 76 ~~----~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~ 112 (118)
.+ .+++++|.+.|++..+.+ +...+..+-.+|.+
T Consensus 121 ~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 121 HDGKVVTRDFKKAVEYFTKACDLN---DGDGCTILGSLYDA 158 (273)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HcCCCcccCHHHHHHHHHHHHhcC---cHHHHHHHHHHHHc
Confidence 55 566666666666655544 33344444444443
No 92
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.37 E-value=1.8e-05 Score=49.15 Aligned_cols=110 Identities=9% Similarity=-0.019 Sum_probs=88.5
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccH-------HHHHHHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP-------VSHIGVLT 73 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~-------~~~~~ll~ 73 (118)
.+..+|.+.|++++|+..|++.. ..+...|..+-..|...|++++|...|++..+.. +-+. ..|..+-.
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~ 125 (228)
T 4i17_A 47 NCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV-PGNATIEKLYAIYYLKEGQ 125 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHhH
Confidence 36678889999999999998764 3467789999999999999999999999998752 1133 55777888
Q ss_pred HHhcCCChhhHHHHHHHHhhcCCCcc---HHHHHHHHHHHHHcccc
Q 046694 74 ACSLGGLVEKGKKFFDEMQARNVKPT---ETHYACMVYLLIKYNQK 116 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~~g~~~~---~~t~~~li~~~~~~g~~ 116 (118)
.+.+.|++++|.+.|++..+. .|+ ...+..+-.+|...|+.
T Consensus 126 ~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 126 KFQQAGNIEKAEENYKHATDV--TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHTTS--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhc--CCCcccHHHHHHHHHHHHHHHHH
Confidence 888999999999999999774 454 56777777777766653
No 93
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.36 E-value=6.5e-06 Score=46.87 Aligned_cols=89 Identities=10% Similarity=-0.030 Sum_probs=73.6
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
+...+.+.|++++|+..|++.. ..+...|..+-..+...|++++|+..|++..+.. +-+...+..+-.++.+.|++
T Consensus 23 ~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~la~~~~~~g~~ 101 (121)
T 1hxi_A 23 EGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNEHNA 101 (121)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCH
Confidence 4457788999999999998775 3478888888899999999999999999987753 22567888888899999999
Q ss_pred hhHHHHHHHHhhc
Q 046694 82 EKGKKFFDEMQAR 94 (118)
Q Consensus 82 ~~a~~~~~~m~~~ 94 (118)
++|...+++..+.
T Consensus 102 ~~A~~~~~~al~~ 114 (121)
T 1hxi_A 102 NAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988653
No 94
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.35 E-value=4.8e-06 Score=56.62 Aligned_cols=112 Identities=6% Similarity=0.031 Sum_probs=93.6
Q ss_pred chHHHHHHHhcCC-HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGR-IDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~-~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
|+.+-.++.+.|+ +++|+..|++.. ..+...|+.+-..+...|++++|+..|++..+.. +-+...|..+-.++.+
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld-P~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQD-AKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHH
Confidence 5667778889996 999999999775 4488899999999999999999999999998753 2277889999999999
Q ss_pred CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHH-ccc
Q 046694 78 GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK-YNQ 115 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~-~g~ 115 (118)
.|++++|...++++.+.... +...|+.+-.++.+ .|.
T Consensus 213 ~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~l~~~ 250 (382)
T 2h6f_A 213 FKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISNTTGY 250 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCS
T ss_pred cCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCc
Confidence 99999999999999886433 67888888888887 444
No 95
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.28 E-value=7.3e-06 Score=57.16 Aligned_cols=111 Identities=10% Similarity=-0.021 Sum_probs=87.4
Q ss_pred HHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 6 LDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
-..+.+.|++++|+..|++.. ..+...|..+-..|.+.|++++|.+.+++..+.. +-+...+..+-.++.+.|+++
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g~~~ 91 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGKFR 91 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHH
Confidence 345677899999999998764 4478899999999999999999999999998763 236788899999999999999
Q ss_pred hHHHHHHHHhhcCCCccHHHHHHHHHH--HHHcccccC
Q 046694 83 KGKKFFDEMQARNVKPTETHYACMVYL--LIKYNQKAR 118 (118)
Q Consensus 83 ~a~~~~~~m~~~g~~~~~~t~~~li~~--~~~~g~~~~ 118 (118)
+|.+.|++..+..- .+...+..+-.+ +.+.|++++
T Consensus 92 eA~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~g~~~~ 128 (477)
T 1wao_1 92 AALRDYETVVKVKP-HDKDAKMKYQECNKIVKQKAFER 128 (477)
T ss_dssp HHHHHHHHHHHHST-TCTTHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999977532 133445555444 777676653
No 96
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.27 E-value=2.5e-05 Score=46.19 Aligned_cols=95 Identities=9% Similarity=0.012 Sum_probs=77.9
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCC---------------------CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPV---------------------KDSASWITLILGYGMLGELDVAINLFEAMREDGV 61 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~---------------------~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~ 61 (118)
...-..+.+.|++++|+..|++... .+...|..+-.+|.+.|++++|+..+++..+..
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~- 93 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE- 93 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC-
Confidence 3456678899999999999976531 134688889999999999999999999998753
Q ss_pred CccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccH
Q 046694 62 EYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE 100 (118)
Q Consensus 62 ~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~ 100 (118)
+-+...|..+-.++...|++++|...|++..+. .|+.
T Consensus 94 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~ 130 (162)
T 3rkv_A 94 ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--HPAA 130 (162)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CGGG
T ss_pred CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--CCCC
Confidence 336788999999999999999999999999775 4543
No 97
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.25 E-value=2e-05 Score=51.13 Aligned_cols=113 Identities=6% Similarity=-0.073 Sum_probs=84.3
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCC-----CC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-cc----HHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPV-----KD----SASWITLILGYGMLGELDVAINLFEAMREDGVE-YY----PVSHIG 70 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~-----~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p~----~~~~~~ 70 (118)
.+..+.+.|++++|..++++... ++ ...+..+...+...+++++|+..|++..+.... ++ ..+++.
T Consensus 81 ~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 3u3w_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 35678889999999999987642 22 223445666777778999999999999874322 23 346899
Q ss_pred HHHHHhcCCChhhHHHHHHHHhh----c-CCCcc-HHHHHHHHHHHHHccccc
Q 046694 71 VLTACSLGGLVEKGKKFFDEMQA----R-NVKPT-ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 71 ll~~~~~~~~~~~a~~~~~~m~~----~-g~~~~-~~t~~~li~~~~~~g~~~ 117 (118)
+-..|...|++++|...|++..+ . +..+. ..++..+-.+|.+.|+.+
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~ 213 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYE 213 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999863 2 22333 447888999999888765
No 98
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.24 E-value=2.4e-05 Score=54.20 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=89.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC--CC-C---------------HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP--VK-D---------------SASWITLILGYGMLGELDVAINLFEAMREDGVEY 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~--~~-~---------------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p 63 (118)
|..+-..|.+.|++++|+..|++.. .| + ...|..+-.+|.+.|++++|+..|++..+.. +-
T Consensus 271 ~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~ 349 (457)
T 1kt0_A 271 VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD-SA 349 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-Cc
Confidence 3455678889999999999998764 22 3 5789999999999999999999999998753 23
Q ss_pred cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 64 YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 64 ~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+...|..+-.+|.+.|++++|...|++..+.. +-+...+..+-.++.+.|+.
T Consensus 350 ~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 350 NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN-PQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999997743 22456777777777766653
No 99
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.22 E-value=3.5e-05 Score=50.05 Aligned_cols=111 Identities=6% Similarity=-0.069 Sum_probs=75.6
Q ss_pred HHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHH--------------------------
Q 046694 6 LDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAM-------------------------- 56 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m-------------------------- 56 (118)
-..+.+.|++++|+..|++.. ..+...+..+-..+...|++++|...+++.
T Consensus 124 a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 124 AMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 344556666666666666553 225556666666666666666666665553
Q ss_pred --------HHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCC-ccHHHHHHHHHHHHHccccc
Q 046694 57 --------REDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVK-PTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 57 --------~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~-~~~~t~~~li~~~~~~g~~~ 117 (118)
.+.. +.+...+..+-..+...|++++|...+.+..+..-. .+...+..+..+|...|+.+
T Consensus 204 a~~~l~~al~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 204 EIQQLQQQVAEN-PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 2221 235677888888889999999999999999775433 23678889999998888754
No 100
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.22 E-value=1.4e-05 Score=48.41 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=79.7
Q ss_pred HhcCCHHHHHH---HhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHH----cCCCc-cHHHHHHHHHHHhcCCCh
Q 046694 10 TRTGRIDLANK---IFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE----DGVEY-YPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 10 ~~~~~~~~a~~---~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~----~~~~p-~~~~~~~ll~~~~~~~~~ 81 (118)
...|++++|.+ ++..-+......+..+-..+...|++++|...+++..+ .+..| ....+..+-..+...|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 46799999999 76654445677889999999999999999999999865 22233 456788888899999999
Q ss_pred hhHHHHHHHHhhc----CCCc--cHHHHHHHHHHHHHccccc
Q 046694 82 EKGKKFFDEMQAR----NVKP--TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 82 ~~a~~~~~~m~~~----g~~~--~~~t~~~li~~~~~~g~~~ 117 (118)
++|.+.+++..+. +-.| ....+..+-.++...|+++
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 124 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLA 124 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999987442 3122 3456777888888887764
No 101
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.19 E-value=5.4e-06 Score=50.30 Aligned_cols=116 Identities=15% Similarity=0.028 Sum_probs=85.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC---------CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc--cHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV---------KDSASWITLILGYGMLGELDVAINLFEAMRED----GVEY--YPV 66 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~---------~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p--~~~ 66 (118)
+..+-..|...|++++|...|++... .....+..+-..+...|++++|.+.+++..+. +-.| ...
T Consensus 29 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 108 (203)
T 3gw4_A 29 RFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASA 108 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHH
Confidence 45567788899999999998876642 14567888888999999999999999988543 2122 245
Q ss_pred HHHHHHHHHhcCCChhhHHHHHHHHhhc----CCCc-cHHHHHHHHHHHHHccccc
Q 046694 67 SHIGVLTACSLGGLVEKGKKFFDEMQAR----NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 67 ~~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
.+..+-..+...|++++|...+++..+. +-.+ -..++..+-.++.+.|+.+
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 164 (203)
T 3gw4_A 109 NAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLL 164 (203)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHH
Confidence 6778888889999999999999987432 2211 2344677778888888764
No 102
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.18 E-value=3e-05 Score=52.41 Aligned_cols=113 Identities=6% Similarity=-0.069 Sum_probs=89.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-------------------CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-------------------KDSASWITLILGYGMLGELDVAINLFEAMREDGVE 62 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-------------------~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~ 62 (118)
|..+-..+.+.|++++|+..|++... .+...|..+-..|.+.|++++|+..+++..+.. +
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p 304 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID-P 304 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-T
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC-c
Confidence 34566788899999999999986542 256788899999999999999999999998753 2
Q ss_pred ccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 63 p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
-+...+..+-.++.+.|++++|.+.|++..+.. +.+...+..+-.++.+.++.
T Consensus 305 ~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~-P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQEIA-PEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHH
Confidence 367888889999999999999999999997753 22566667777776665543
No 103
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.18 E-value=1.5e-05 Score=55.79 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=27.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC--CC-CH-hhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP--VK-DS-ASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~--~~-~~-~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
..+...+.+.|++++|..+|++.. .| +. ..|...+..+.+.|++++|..+|++..
T Consensus 325 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 383 (530)
T 2ooe_A 325 FAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAR 383 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 344455555666666666666543 22 21 345555554444455555555554443
No 104
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.16 E-value=1.4e-05 Score=46.17 Aligned_cols=116 Identities=11% Similarity=-0.030 Sum_probs=85.9
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
+..+-..|...|++++|...|++... + -..++..+-..+...|++++|.+.+++..+. +-.+ ....
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 91 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQS 91 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 45667788899999999999987641 1 1247888889999999999999999998542 2111 2456
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhc----CCCc-cHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQAR----NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+...|++++|.+.+++..+. +..+ ....+..+-.++...|+.+
T Consensus 92 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 92 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 778888899999999999999987432 2222 2456777788888877654
No 105
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.16 E-value=9e-06 Score=45.70 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=74.4
Q ss_pred hcCCHHHHHHHhhhCCC-----C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhH
Q 046694 11 RTGRIDLANKIFDRLPV-----K-DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKG 84 (118)
Q Consensus 11 ~~~~~~~a~~~~~~m~~-----~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a 84 (118)
..|++++|+..|++... | +...|..+-..|...|++++|...|++..+.. +-+...+..+-.++.+.|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF-PNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHcCCHHHH
Confidence 45788889999986642 3 56688889999999999999999999998763 22577888899999999999999
Q ss_pred HHHHHHHhhcC-CCccHHHHHHHHHHHHH
Q 046694 85 KKFFDEMQARN-VKPTETHYACMVYLLIK 112 (118)
Q Consensus 85 ~~~~~~m~~~g-~~~~~~t~~~li~~~~~ 112 (118)
...+++..+.. -.|+...|...+..|.+
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 99999985543 33445555555555543
No 106
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.16 E-value=6.5e-05 Score=48.67 Aligned_cols=113 Identities=13% Similarity=-0.029 Sum_probs=84.4
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC-----CCC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHH---c-CCCc--cHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP-----VKD----SASWITLILGYGMLGELDVAINLFEAMRE---D-GVEY--YPVSHI 69 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~-----~~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~---~-~~~p--~~~~~~ 69 (118)
+...+...|++++|...|++.. ..+ ..+|+.+-..|...|++++|...|++..+ . +-.+ ...++.
T Consensus 121 ~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~ 200 (293)
T 2qfc_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRY 200 (293)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHH
Confidence 3445677889999999887542 111 45889999999999999999999999862 2 1112 236888
Q ss_pred HHHHHHhcCCChhhHHHHHHHHhhcC----CCc-cHHHHHHHHHHHHHccccc
Q 046694 70 GVLTACSLGGLVEKGKKFFDEMQARN----VKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 70 ~ll~~~~~~~~~~~a~~~~~~m~~~g----~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
.+-..|.+.|++++|...+++..+.. ... -..+|..+-.+|.+.|+.+
T Consensus 201 nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 253 (293)
T 2qfc_A 201 NHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEE 253 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcH
Confidence 99999999999999999999874432 111 2677888888888888764
No 107
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.16 E-value=5e-06 Score=49.83 Aligned_cols=106 Identities=8% Similarity=-0.025 Sum_probs=80.8
Q ss_pred HhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHH-HhcCCCh--hh
Q 046694 10 TRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTA-CSLGGLV--EK 83 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~-~~~~~~~--~~ 83 (118)
...|++++|...|++.. ..+...|..+-..|...|++++|...|++..+.. +.+...+..+... +...|++ ++
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR-GENAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhcCCcchHH
Confidence 45677888888887653 4477889999999999999999999999997653 2356677777777 7789998 99
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 84 GKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 84 a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
|...+++..+.. +.+...+..+-.+|.+.|+.+
T Consensus 100 A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~ 132 (177)
T 2e2e_A 100 TRAMIDKALALD-SNEITALMLLASDAFMQANYA 132 (177)
T ss_dssp HHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhC-CCcHHHHHHHHHHHHHcccHH
Confidence 999999997754 235778888888898888764
No 108
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.16 E-value=2.1e-05 Score=52.19 Aligned_cols=86 Identities=12% Similarity=0.169 Sum_probs=46.4
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CC-----CHhhHHHHHHHHHh--cC--CHHHHHHHHHHHHHcCCCccHHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VK-----DSASWITLILGYGM--LG--ELDVAINLFEAMREDGVEYYPVSHIGVLT 73 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~-----~~~~~~~li~~~~~--~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 73 (118)
++..+.+.|+.+.|.+.+++|. .| +-.+...+..++.. .| +..+|..+|+++.+. .|+..+-..++.
T Consensus 142 ~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~p~~~~~~lLln 219 (310)
T 3mv2_B 142 AIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--FPTWKTQLGLLN 219 (310)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--SCSHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--CCCcccHHHHHH
Confidence 4556666666666666666664 23 12333444434222 12 666666666666443 233333334444
Q ss_pred HHhcCCChhhHHHHHHHHh
Q 046694 74 ACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~ 92 (118)
++.+.|++++|++.++.+.
T Consensus 220 ~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 220 LHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 6666667777776666553
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.15 E-value=2.7e-05 Score=54.99 Aligned_cols=104 Identities=8% Similarity=-0.112 Sum_probs=75.0
Q ss_pred cCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHH
Q 046694 12 TGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFF 88 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~ 88 (118)
.|++++|...|++.. ..+...|..+-..+...|++++|.+.|++..+.. +-+...+..+-..+...|++++|.+.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~ 80 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH-PGHPEAVARLGRVRWTQQRHAEAAVLL 80 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 478899999998875 3367889999999999999999999999988753 235788999999999999999999999
Q ss_pred HHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 89 DEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 89 ~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
++..+.. +.+...+..+-.+|.+.|+.+
T Consensus 81 ~~al~~~-p~~~~~~~~la~~~~~~g~~~ 108 (568)
T 2vsy_A 81 QQASDAA-PEHPGIALWLGHALEDAGQAE 108 (568)
T ss_dssp HHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhcC-CCCHHHHHHHHHHHHHcCCHH
Confidence 9997753 335788899999999988865
No 110
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.15 E-value=4.7e-05 Score=49.35 Aligned_cols=90 Identities=8% Similarity=-0.104 Sum_probs=76.9
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+...+.+.|++++|+..|++.. ..+...|..+-..|.+.|++++|...+++..+.. +-+...+..+-.++...|
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g 86 (281)
T 2c2l_A 8 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFLGQCQLEME 86 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC
Confidence 455678889999999999998764 3488899999999999999999999999987652 236788888999999999
Q ss_pred ChhhHHHHHHHHhh
Q 046694 80 LVEKGKKFFDEMQA 93 (118)
Q Consensus 80 ~~~~a~~~~~~m~~ 93 (118)
++++|.+.|++..+
T Consensus 87 ~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 87 SYDEAIANLQRAYS 100 (281)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999998754
No 111
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.14 E-value=2.8e-05 Score=52.07 Aligned_cols=116 Identities=9% Similarity=-0.014 Sum_probs=76.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-----CC-----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-----VK-----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPV 66 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-----~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~ 66 (118)
|..+-..|...|++++|...+++.. .+ ...+++.+-..|...|++++|.+.|++..+. +-.+ ...
T Consensus 146 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 225 (383)
T 3ulq_A 146 FFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGR 225 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 3455667777788887777776543 11 2346777777888888888888888877532 1111 224
Q ss_pred HHHHHHHHHhcCCChhhHHHHHHHHhhc----CC-CccHHHHHHHHHHHHHccccc
Q 046694 67 SHIGVLTACSLGGLVEKGKKFFDEMQAR----NV-KPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 67 ~~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~-~~~~~t~~~li~~~~~~g~~~ 117 (118)
++..+-..|...|++++|.+.+++..+. +. +....++..+-.+|.+.|+.+
T Consensus 226 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 226 TLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHH
Confidence 6777777888888888888888877552 33 334666777777777777654
No 112
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.13 E-value=7.2e-05 Score=47.46 Aligned_cols=91 Identities=15% Similarity=0.056 Sum_probs=72.6
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CC-C---HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-Cc-cHHHHHHHHHHHh
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VK-D---SASWITLILGYGMLGELDVAINLFEAMREDGV-EY-YPVSHIGVLTACS 76 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~-~---~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~-~p-~~~~~~~ll~~~~ 76 (118)
+...+.+.|++++|+..|++.. .| + ...+..+-..|.+.|++++|...|++..+..- .| ....+..+-.++.
T Consensus 21 ~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~ 100 (261)
T 3qky_A 21 RAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY 100 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH
Confidence 3456788999999999999886 23 3 56788888999999999999999999987521 12 2455666777777
Q ss_pred c--------CCChhhHHHHHHHHhhcC
Q 046694 77 L--------GGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 77 ~--------~~~~~~a~~~~~~m~~~g 95 (118)
+ .|++++|...|++..+..
T Consensus 101 ~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 101 KLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp HHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred HhcccccccchhHHHHHHHHHHHHHHC
Confidence 7 999999999999997753
No 113
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.13 E-value=1.9e-05 Score=52.92 Aligned_cols=92 Identities=12% Similarity=0.043 Sum_probs=73.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CC-CccHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GV-EYYPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~-~p~~~~ 67 (118)
++.+-.+|...|++++|...|++... + ...++..+-..|...|++++|.+.|++..+. +- +....+
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 266 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQA 266 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 45567788899999999999886641 1 2247888999999999999999999998762 33 335677
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
+..+-..+.+.|++++|.+.+++..+
T Consensus 267 ~~~l~~~~~~~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 267 YFLITQIHYKLGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 88899999999999999999998744
No 114
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.13 E-value=4.1e-05 Score=45.46 Aligned_cols=87 Identities=9% Similarity=0.008 Sum_probs=74.1
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...+..+-..+.+.|++++|...|++..... +-+...|..+-.++.+.|++++|...|++..+.. +.+...|..+-.
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-P~~~~~~~~lg~ 112 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG-KNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-SSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-CCCcHHHHHHHH
Confidence 66678888889999999999999999998753 2368889999999999999999999999998754 235778889999
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
+|.+.|+.+
T Consensus 113 ~~~~lg~~~ 121 (151)
T 3gyz_A 113 CQLRLKAPL 121 (151)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 999999875
No 115
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.12 E-value=5.3e-05 Score=49.66 Aligned_cols=112 Identities=8% Similarity=-0.001 Sum_probs=71.9
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc--HHHHHHHHHHHhcCCC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY--PVSHIGVLTACSLGGL 80 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~ll~~~~~~~~ 80 (118)
+...+...|++++|.++|+... .|+....-.+-..+.+.++|++|+..|++..... .|. ...+..+-.++...|+
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP-DKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC-CcccHHHHHHHHHHHHHHCCC
Confidence 3456777888888888888876 3432244455557777888888888887443321 111 2356666777778888
Q ss_pred hhhHHHHHHHHhhcCCCcc--HHHHHHHHHHHHHccccc
Q 046694 81 VEKGKKFFDEMQARNVKPT--ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~~~~--~~t~~~li~~~~~~g~~~ 117 (118)
+++|...|++.......|. .......-.++.+.|+.+
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH
Confidence 8888888888765443243 335555666666666654
No 116
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.7e-05 Score=57.52 Aligned_cols=112 Identities=12% Similarity=0.066 Sum_probs=87.4
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+..+|.+.|++++|+..|++.. ..+...|..+-..+...|++++|...|++..+.. +-+...+..+-.++.+.|
T Consensus 437 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 437 LMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTF-PGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcC
Confidence 345567888899999999998775 3477788888889999999999999999987652 225677788888888889
Q ss_pred ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 80 LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
++++ .+.|++..+.. +-+...|..+-.++.+.|+.+
T Consensus 516 ~~~~-~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~ 551 (681)
T 2pzi_A 516 NTDE-HKFYQTVWSTN-DGVISAAFGLARARSAEGDRV 551 (681)
T ss_dssp CCCT-TCHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred ChHH-HHHHHHHHHhC-CchHHHHHHHHHHHHHcCCHH
Confidence 9888 88888887643 225677888888888888764
No 117
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.12 E-value=6e-05 Score=50.02 Aligned_cols=110 Identities=9% Similarity=-0.005 Sum_probs=79.4
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--C---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-----cHHHHHHHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--V---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-----YPVSHIGVLT 73 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-----~~~~~~~ll~ 73 (118)
.+..++...|++++|.+++.+.. . .+...+-..+..+.+.|+++.|.+.+++|.+. .| +..+..-+..
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--IEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CccccccchHHHHHHHH
Confidence 45667888899999999998762 1 36678888999999999999999999999775 56 2444455554
Q ss_pred H----HhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 74 A----CSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 74 ~----~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+ ....++.+.|..+|+++.+.. |+..+-..++.++.+.|+++
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~--p~~~~~~lLln~~~~~g~~~ 228 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTF--PTWKTQLGLLNLHLQQRNIA 228 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTS--CSHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhC--CCcccHHHHHHHHHHcCCHH
Confidence 4 223348999999999986643 44333344444777777765
No 118
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.11 E-value=0.00011 Score=41.78 Aligned_cols=89 Identities=3% Similarity=-0.209 Sum_probs=75.1
Q ss_pred CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHH
Q 046694 27 VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACM 106 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~l 106 (118)
..+...|..+-..+...|++++|...|++..+.. +.+...+..+-..+...|++++|...+++..+.. +.+...+..+
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l 83 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFL 83 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHHHHHHH
Confidence 3467788889999999999999999999987753 3367889999999999999999999999997754 3367888899
Q ss_pred HHHHHHccccc
Q 046694 107 VYLLIKYNQKA 117 (118)
Q Consensus 107 i~~~~~~g~~~ 117 (118)
-.+|.+.|+++
T Consensus 84 ~~~~~~~~~~~ 94 (137)
T 3q49_B 84 GQCQLEMESYD 94 (137)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHHhhHH
Confidence 99999888764
No 119
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.10 E-value=5.9e-05 Score=40.98 Aligned_cols=87 Identities=10% Similarity=-0.058 Sum_probs=72.1
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCc--cHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP--TETHYACM 106 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~--~~~t~~~l 106 (118)
+...|..+-..+...|++++|...|++..+.. +.+...+..+-..+.+.|++++|.+.+++..+.. +. +...+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~l 82 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVI-EDEYNKDVWAAK 82 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccchHHHHHHH
Confidence 55667778888999999999999999997753 3367788889999999999999999999997753 22 57888889
Q ss_pred HHHHHHc-cccc
Q 046694 107 VYLLIKY-NQKA 117 (118)
Q Consensus 107 i~~~~~~-g~~~ 117 (118)
..++.+. |+.+
T Consensus 83 ~~~~~~~~~~~~ 94 (112)
T 2kck_A 83 ADALRYIEGKEV 94 (112)
T ss_dssp HHHHTTCSSCSH
T ss_pred HHHHHHHhCCHH
Confidence 9999888 8764
No 120
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.10 E-value=7.8e-06 Score=54.38 Aligned_cols=116 Identities=12% Similarity=-0.025 Sum_probs=85.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-----CC----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-----VK----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-----~~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
|..+...|...|++++|...|++.. .+ ...+|..+-..|...|++++|...+++..+. +-.+ ...+
T Consensus 190 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 269 (406)
T 3sf4_A 190 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQS 269 (406)
T ss_dssp HHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHH
Confidence 4556778888999999999888664 11 2337888889999999999999999988542 2111 2567
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhc----CCCc-cHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQAR----NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+.+.|++++|.+.+++..+. +-.+ ...++..+-.+|.+.|+.+
T Consensus 270 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 270 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 888888999999999999999887442 2111 2567778888888888764
No 121
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.07 E-value=4.7e-05 Score=50.96 Aligned_cols=115 Identities=12% Similarity=0.049 Sum_probs=69.0
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC-----CC-----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP-----VK-----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~-----~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
..+-.+|...|++++|...+++.. .+ ...+++.+-..|...|++++|.+.|++..+. +-++ ...+
T Consensus 145 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 224 (378)
T 3q15_A 145 FKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAIS 224 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 345556667777777766665432 01 2345666667777777777777777776432 1111 2345
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhh----cCCCccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQA----RNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~----~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+...|++++|.+.+++..+ .+-+....++..+-.+|.+.|+.+
T Consensus 225 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 278 (378)
T 3q15_A 225 LLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQ 278 (378)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHH
Confidence 66666777777777777777777644 122223566666777777666653
No 122
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.07 E-value=8.3e-05 Score=41.74 Aligned_cols=87 Identities=7% Similarity=-0.182 Sum_probs=73.7
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...|..+-..+...|++++|...|++..+.. +.+...+..+...+...|++++|.+.+++..+.. +.+...+..+-.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~ 92 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKGYTRKAA 92 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHHHHHHHH
Confidence 66788889999999999999999999987652 2367888999999999999999999999997753 336788888999
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
++.+.|+++
T Consensus 93 ~~~~~~~~~ 101 (133)
T 2lni_A 93 ALEAMKDYT 101 (133)
T ss_dssp HHHHTTCHH
T ss_pred HHHHHhhHH
Confidence 999888765
No 123
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.07 E-value=1.6e-05 Score=51.71 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=86.0
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC-------CC--CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP-------VK--DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVSH 68 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~-------~~--~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~~ 68 (118)
+.....|...|++++|...|++.. .+ ...+|+.+-..|.+.|++++|+..|++..+. |-.+ -..++
T Consensus 41 ~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 120 (292)
T 1qqe_A 41 VQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 (292)
T ss_dssp HHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 444567788899999988887553 12 2568999999999999999999999988642 2111 14578
Q ss_pred HHHHHHHhcC-CChhhHHHHHHHHhhcCC----Ccc-HHHHHHHHHHHHHccccc
Q 046694 69 IGVLTACSLG-GLVEKGKKFFDEMQARNV----KPT-ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 69 ~~ll~~~~~~-~~~~~a~~~~~~m~~~g~----~~~-~~t~~~li~~~~~~g~~~ 117 (118)
+.+-..|... |++++|...|++..+..- .+. ..+++.+-..|.+.|+.+
T Consensus 121 ~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 175 (292)
T 1qqe_A 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYI 175 (292)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHH
Confidence 8888999996 999999999999855321 111 457888888998888765
No 124
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.00021 Score=38.91 Aligned_cols=84 Identities=8% Similarity=-0.121 Sum_probs=52.7
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCcc-------HHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPT-------ETH 102 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~-------~~t 102 (118)
...|..+-..+...|++++|.+.|++..+.. +.+...+..+-.++.+.|++++|.+.+++..+.. |+ ...
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~ 80 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYT--STAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC--SSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCccHHHHHHHH
Confidence 3455666667777777777777777776542 2256667777777777777777777777776532 32 334
Q ss_pred HHHHHHHHHHcccc
Q 046694 103 YACMVYLLIKYNQK 116 (118)
Q Consensus 103 ~~~li~~~~~~g~~ 116 (118)
+..+-.++...|+.
T Consensus 81 ~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 81 QYRLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhH
Confidence 44455555554443
No 125
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.07 E-value=0.00017 Score=46.69 Aligned_cols=112 Identities=15% Similarity=-0.008 Sum_probs=85.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC-----CCC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHH----c-CCCcc-HHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP-----VKD----SASWITLILGYGMLGELDVAINLFEAMRE----D-GVEYY-PVSH 68 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~-----~~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~----~-~~~p~-~~~~ 68 (118)
.+...+...+++++|+..|++.. .++ ..+|+.+-..|...|++++|...|++..+ . +..+. ..++
T Consensus 120 ~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 35556667789999999998653 223 33689999999999999999999999974 1 22232 3588
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHhh----cCCCcc-HHHHHHHHHHHHHccc
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEMQA----RNVKPT-ETHYACMVYLLIKYNQ 115 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m~~----~g~~~~-~~t~~~li~~~~~~g~ 115 (118)
..+...|.+.|++++|.+.+++..+ .+..+. ...|..+-.+|.+.|+
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999998743 333333 6778888888888873
No 126
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.05 E-value=8.1e-05 Score=43.73 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=72.6
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...+..+-..+...|++++|...|++..... +.+...|..+-.++...|++++|...|++..+.. +.+...+..+-.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~ 97 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD-IXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCchHHHHHHH
Confidence 56677778889999999999999999987653 3377888888899999999999999999997754 235678888889
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
+|...|+.+
T Consensus 98 ~~~~~g~~~ 106 (148)
T 2vgx_A 98 CLLQXGELA 106 (148)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 999888865
No 127
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.05 E-value=0.00014 Score=41.58 Aligned_cols=86 Identities=7% Similarity=-0.087 Sum_probs=72.3
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
...|...-..|.+.|++++|++.|++..+.. +-+...|..+-.++.+.|++++|...+++..+.. +.+...|..+-.+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~ 90 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACLTKLMEFQRALDDCDTCIRLD-SKFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh-hhhhHHHHHHHHH
Confidence 4467777888999999999999999987653 3378899999999999999999999999997753 3357788899999
Q ss_pred HHHccccc
Q 046694 110 LIKYNQKA 117 (118)
Q Consensus 110 ~~~~g~~~ 117 (118)
|.+.|+++
T Consensus 91 ~~~~~~~~ 98 (126)
T 4gco_A 91 LVAMREWS 98 (126)
T ss_dssp HHHTTCHH
T ss_pred HHHCCCHH
Confidence 99988765
No 128
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.04 E-value=1.3e-05 Score=51.62 Aligned_cols=116 Identities=11% Similarity=-0.026 Sum_probs=87.3
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
+..+...|...|++++|...|++... + ...++..+...+...|++++|...+++..+. +-.+ ...+
T Consensus 186 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 265 (338)
T 3ro2_A 186 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQS 265 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 34566788899999999999987641 1 2337888889999999999999999998642 1111 2567
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhc----CCC-ccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQAR----NVK-PTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~-~~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+...|++++|...+++..+. +-. ....++..+..+|.+.|+.+
T Consensus 266 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 320 (338)
T 3ro2_A 266 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 320 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChH
Confidence 788889999999999999999987442 211 12557778888888888764
No 129
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.04 E-value=0.00011 Score=40.11 Aligned_cols=86 Identities=12% Similarity=-0.115 Sum_probs=71.3
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
...+..+...+...|++++|.+.|++..... +.+...+..+...+.+.|++++|...+++..+.. +.+...+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~ 81 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHHHH
Confidence 4567778888999999999999999997653 3367888888999999999999999999997753 3357788888899
Q ss_pred HHHccccc
Q 046694 110 LIKYNQKA 117 (118)
Q Consensus 110 ~~~~g~~~ 117 (118)
+.+.|+.+
T Consensus 82 ~~~~~~~~ 89 (118)
T 1elw_A 82 LEFLNRFE 89 (118)
T ss_dssp HHHTTCHH
T ss_pred HHHHhhHH
Confidence 98888764
No 130
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.03 E-value=0.00014 Score=43.68 Aligned_cols=106 Identities=11% Similarity=-0.043 Sum_probs=82.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CCC--------H-----hhHHHHHHHHHhcCCHHHHHHHHHHHHHc-----CCCc
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VKD--------S-----ASWITLILGYGMLGELDVAINLFEAMRED-----GVEY 63 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~~--------~-----~~~~~li~~~~~~~~~~~a~~~~~~m~~~-----~~~p 63 (118)
..-..+.+.|++++|+..|++-. .|+ . ..|+.+-.++.+.|++++|+..+++..+. .+.|
T Consensus 16 ~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~p 95 (159)
T 2hr2_A 16 SDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQ 95 (159)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCC
Confidence 34556778999999999998664 222 2 38999999999999999999999998763 2356
Q ss_pred c-HHHH----HHHHHHHhcCCChhhHHHHHHHHh-----hcCCCccHHHHHHHHHH
Q 046694 64 Y-PVSH----IGVLTACSLGGLVEKGKKFFDEMQ-----ARNVKPTETHYACMVYL 109 (118)
Q Consensus 64 ~-~~~~----~~ll~~~~~~~~~~~a~~~~~~m~-----~~g~~~~~~t~~~li~~ 109 (118)
+ ...| ...-.++...|++++|...|++.. +.|+.+........+..
T Consensus 96 d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~ 151 (159)
T 2hr2_A 96 DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAID 151 (159)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4 5667 788889999999999999999973 35677666665555443
No 131
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.03 E-value=5.8e-05 Score=44.11 Aligned_cols=89 Identities=13% Similarity=-0.056 Sum_probs=70.0
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH--HHHHHHHh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH--IGVLTACS 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~~~ 76 (118)
|..+..++.+.|++++|...|++.. ..+...|..+-..+...|++++|...|++..+..- .+...+ ......+.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~ 128 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-HDKDAKMKYQECNKIV 128 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHH
Confidence 4456778889999999999998764 44778899999999999999999999999986532 233444 34444577
Q ss_pred cCCChhhHHHHHHHH
Q 046694 77 LGGLVEKGKKFFDEM 91 (118)
Q Consensus 77 ~~~~~~~a~~~~~~m 91 (118)
+.|++++|.+.+...
T Consensus 129 ~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 129 KQKAFERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccch
Confidence 889999999998876
No 132
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.02 E-value=0.00011 Score=42.58 Aligned_cols=87 Identities=13% Similarity=0.030 Sum_probs=71.3
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...+..+-..+.+.|++++|...|++..... +.+...|..+-.++.+.|++++|...|++..+.. +.+...+..+-.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~ 94 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYGALMD-INEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHHHHHH
Confidence 45566677788889999999999999998753 2367888888899999999999999999997754 335677888888
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
+|...|+.+
T Consensus 95 ~~~~~g~~~ 103 (142)
T 2xcb_A 95 CHLQLGDLD 103 (142)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 999888765
No 133
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.01 E-value=4.5e-05 Score=50.67 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=87.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
|..+...|...|++++|...|++... + ...++..+-..|...|++++|.+.|++..+. +-.+ ...+
T Consensus 230 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 309 (406)
T 3sf4_A 230 YSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRA 309 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 45667788999999999999987641 1 2568888999999999999999999998643 2122 2567
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhh----cCCCc-cHHHHHHHHHHHHHcccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQA----RNVKP-TETHYACMVYLLIKYNQK 116 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~----~g~~~-~~~t~~~li~~~~~~g~~ 116 (118)
+..+-..+.+.|++++|.+.+++..+ .+-.+ ...++..+...+...|+.
T Consensus 310 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 310 CWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 88888999999999999999998743 23222 356677788888877764
No 134
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.00 E-value=0.00016 Score=40.18 Aligned_cols=87 Identities=13% Similarity=0.012 Sum_probs=72.6
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...+..+...+...|++++|...|++..+.. +.+...+..+...+...|++++|.+.+++..+.. +.+...+..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~ 88 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-PAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-ccCHHHHHHHHH
Confidence 55678888899999999999999999997653 3367888899999999999999999999997753 335778888888
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
++.+.|+.+
T Consensus 89 ~~~~~~~~~ 97 (131)
T 2vyi_A 89 ALSSLNKHV 97 (131)
T ss_dssp HHHHTTCHH
T ss_pred HHHHhCCHH
Confidence 998888764
No 135
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.99 E-value=1.8e-05 Score=53.02 Aligned_cols=116 Identities=9% Similarity=-0.048 Sum_probs=87.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCC-ccHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVE-YYPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~-p~~~~ 67 (118)
|..+...|...|++++|...|++... + ....+..+...|...|++++|...|++..+. +-. ....+
T Consensus 226 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 305 (411)
T 4a1s_A 226 CGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQS 305 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 44567788899999999999987641 1 1237888899999999999999999988643 111 12577
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhc----CCC-ccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQAR----NVK-PTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~-~~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+...|++++|...+++..+. +.. ....++..+..+|.+.|+.+
T Consensus 306 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 360 (411)
T 4a1s_A 306 CYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHE 360 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHH
Confidence 888899999999999999999987442 211 12457778888888888764
No 136
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.99 E-value=8.2e-05 Score=47.20 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=81.5
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CC----CHhhHHHHHHHHHh--------cCCHHHHHHHHHHHHHcCCCcc-HHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VK----DSASWITLILGYGM--------LGELDVAINLFEAMREDGVEYY-PVSH 68 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~----~~~~~~~li~~~~~--------~~~~~~a~~~~~~m~~~~~~p~-~~~~ 68 (118)
.+..+|.+.|++++|+..|++.. .| ....+..+-..+.. .|++++|...|++..+.. |+ ....
T Consensus 57 ~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~ 134 (261)
T 3qky_A 57 YLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--PNHELVD 134 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--TTCTTHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--cCchhHH
Confidence 45677889999999999999775 22 23456667777777 999999999999998752 32 2222
Q ss_pred -----------------HHHHHHHhcCCChhhHHHHHHHHhhcCCCc--cHHHHHHHHHHHHHcc
Q 046694 69 -----------------IGVLTACSLGGLVEKGKKFFDEMQARNVKP--TETHYACMVYLLIKYN 114 (118)
Q Consensus 69 -----------------~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~--~~~t~~~li~~~~~~g 114 (118)
..+-..+.+.|++++|...|++..+..... ....+..+..+|.+.|
T Consensus 135 ~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 135 DATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 455778889999999999999997754321 3557777888887663
No 137
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.99 E-value=1.7e-05 Score=51.93 Aligned_cols=89 Identities=7% Similarity=-0.108 Sum_probs=47.1
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC-------CC--CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP-------VK--DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVSH 68 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~-------~~--~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~~ 68 (118)
+.+..+|.+.|++++|+..|++.. .+ -..+++.+-..|.. |++++|+..|++..+. |-.+ ...++
T Consensus 80 ~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~ 158 (307)
T 2ifu_A 80 EQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELI 158 (307)
T ss_dssp HHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHH
Confidence 344455555566665555554321 11 12355555556655 6666666666665431 1111 13455
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHh
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
+.+-..+.+.|++++|...|++..
T Consensus 159 ~~lg~~~~~~g~~~~A~~~~~~al 182 (307)
T 2ifu_A 159 GKASRLLVRQQKFDEAAASLQKEK 182 (307)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 566666666666666666666653
No 138
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.99 E-value=6.8e-05 Score=54.40 Aligned_cols=107 Identities=10% Similarity=-0.073 Sum_probs=89.5
Q ss_pred HhcCCHHHHHHHhhhCC-----------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 10 TRTGRIDLANKIFDRLP-----------VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~-----------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
...|++++|+..|++.. ..+...|..+-..+...|++++|.+.|++..+.. +-+...|..+-.++...
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~ 480 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV-GWRWRLVWYRAVAELLT 480 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHc
Confidence 57899999999998764 3467788888999999999999999999998752 23678888888999999
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccccC
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~~ 118 (118)
|++++|.+.|++..+.. +-+...+..+-.+|.+.|++++
T Consensus 481 g~~~~A~~~~~~al~l~-P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTF-PGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp TCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHTCCCT
T ss_pred CCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCChHH
Confidence 99999999999997754 2257788899999999998764
No 139
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00018 Score=40.51 Aligned_cols=86 Identities=8% Similarity=-0.115 Sum_probs=71.4
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
...|...-..+.+.|++++|...|++..+.. +.+...|..+-.++.+.|++++|...+++..+.. +.+...|..+-.+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~ 81 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHH
Confidence 3456777788899999999999999997753 3367889999999999999999999999997754 2357788888899
Q ss_pred HHHccccc
Q 046694 110 LIKYNQKA 117 (118)
Q Consensus 110 ~~~~g~~~ 117 (118)
+.+.|+.+
T Consensus 82 ~~~~~~~~ 89 (126)
T 3upv_A 82 QIAVKEYA 89 (126)
T ss_dssp HHHTTCHH
T ss_pred HHHHhCHH
Confidence 98888765
No 140
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.98 E-value=0.00015 Score=42.90 Aligned_cols=87 Identities=13% Similarity=-0.003 Sum_probs=73.9
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...|..+-..+.+.|++++|+..|++..+.. +-+...|..+-.++.+.|++++|...|++..+.. +.+...|..+-.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~ 87 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-PKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHH
Confidence 55678888899999999999999999998753 2378889999999999999999999999997754 335888889999
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
+|.+.|+++
T Consensus 88 ~~~~~g~~~ 96 (164)
T 3sz7_A 88 ARFDMADYK 96 (164)
T ss_dssp HHHHTTCHH
T ss_pred HHHHccCHH
Confidence 999988765
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.97 E-value=0.00024 Score=40.56 Aligned_cols=87 Identities=8% Similarity=-0.131 Sum_probs=72.9
Q ss_pred CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc----HHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHH
Q 046694 28 KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY----PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHY 103 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~----~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~ 103 (118)
.+...+..+-..+...|++++|.+.|++..+. .|+ ...+..+-..+.+.|++++|.+.+++..+.. +.+...+
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 102 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGL--DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVKAL 102 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH--cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHHHH
Confidence 36778888999999999999999999998865 455 6788888899999999999999999987753 2357788
Q ss_pred HHHHHHHHHccccc
Q 046694 104 ACMVYLLIKYNQKA 117 (118)
Q Consensus 104 ~~li~~~~~~g~~~ 117 (118)
..+-.+|.+.|+.+
T Consensus 103 ~~~a~~~~~~~~~~ 116 (148)
T 2dba_A 103 YRRSQALEKLGRLD 116 (148)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHcCCHH
Confidence 88888888888764
No 142
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.93 E-value=8e-05 Score=49.82 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=74.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCccHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEYYPVSH 68 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p~~~~~ 68 (118)
++.+-.+|...|++++|...|++... + ...+++.+-..|...|++++|.+.|++..+. +-+....++
T Consensus 185 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 264 (378)
T 3q15_A 185 LFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVL 264 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHH
Confidence 45677788999999999998876541 1 3457888889999999999999999998761 233347788
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
..+-..+.+.|+.++|...+++..+.
T Consensus 265 ~~la~~~~~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 265 FGLSWTLCKAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 88999999999999999999998553
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.93 E-value=7.7e-05 Score=48.44 Aligned_cols=77 Identities=5% Similarity=-0.044 Sum_probs=61.6
Q ss_pred HHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 15 IDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 15 ~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
.+.....+++....+...+..+-..+...|++++|...|++..+. .| +...+..+...+.+.|++++|...+++..+
T Consensus 102 ~~~l~~~l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 102 EEAIRALLDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQL--SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 345555666555556667778888899999999999999999775 34 677888899999999999999999888744
No 144
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.93 E-value=0.0002 Score=50.04 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=84.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC--C-CHhhHHHHH-HHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV--K-DSASWITLI-LGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~--~-~~~~~~~li-~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
|..++..+.+.|++++|+.+|++... | +...|.... -.+...|++++|..+|++..+.. +-+...|..++..+.+
T Consensus 359 ~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~-p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 359 YIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHC-CCCHHHHHHHHHHHHh
Confidence 55666777788999999999987642 2 222222221 12336899999999999987642 2367889999999999
Q ss_pred CCChhhHHHHHHHHhhcC-CCcc--HHHHHHHHHHHHHccccc
Q 046694 78 GGLVEKGKKFFDEMQARN-VKPT--ETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g-~~~~--~~t~~~li~~~~~~g~~~ 117 (118)
.|+.++|..+|++....+ ..|+ ...|...+....+.|+.+
T Consensus 438 ~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~ 480 (530)
T 2ooe_A 438 LNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLA 480 (530)
T ss_dssp TTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHH
T ss_pred CCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 999999999999997764 2333 558888888888878653
No 145
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.91 E-value=0.0002 Score=39.83 Aligned_cols=87 Identities=10% Similarity=-0.016 Sum_probs=70.4
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC--Ccc----HHHH
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV--KPT----ETHY 103 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~--~~~----~~t~ 103 (118)
...|..+-..+...|++++|...|++..+.. +.+...+..+...+...|++++|...+++..+... .++ ..++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 3467778888999999999999999998753 34678888899999999999999999999866432 222 6778
Q ss_pred HHHHHHHHHccccc
Q 046694 104 ACMVYLLIKYNQKA 117 (118)
Q Consensus 104 ~~li~~~~~~g~~~ 117 (118)
..+-.+|.+.|+++
T Consensus 83 ~~la~~~~~~~~~~ 96 (131)
T 1elr_A 83 ARIGNSYFKEEKYK 96 (131)
T ss_dssp HHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhccHH
Confidence 88888888888764
No 146
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.91 E-value=0.00053 Score=44.94 Aligned_cols=99 Identities=11% Similarity=-0.024 Sum_probs=74.9
Q ss_pred HHHHHhcCCHHHHHHHhhhCCCC-C----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc--HHHHHHHHHHHhcC
Q 046694 6 LDFYTRTGRIDLANKIFDRLPVK-D----SASWITLILGYGMLGELDVAINLFEAMREDGVEYY--PVSHIGVLTACSLG 78 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~~~-~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~ll~~~~~~ 78 (118)
-..+.+.+++++|+..|++.... + ...+..+=.++...|++++|++.|++.......|. .......--++.+.
T Consensus 142 a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~l 221 (282)
T 4f3v_A 142 AVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQ 221 (282)
T ss_dssp HHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHc
Confidence 34778999999999999866532 1 23677778889999999999999999875444353 34566667778899
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHH
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACM 106 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~l 106 (118)
|+.++|..+|+++.+.. |+...+..|
T Consensus 222 Gr~deA~~~l~~a~a~~--P~~~~~~aL 247 (282)
T 4f3v_A 222 GNESAAVALLEWLQTTH--PEPKVAAAL 247 (282)
T ss_dssp TCHHHHHHHHHHHHHHS--CCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC--CcHHHHHHH
Confidence 99999999999998754 444444444
No 147
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.91 E-value=3.9e-05 Score=51.42 Aligned_cols=111 Identities=10% Similarity=-0.035 Sum_probs=85.4
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CC-CH----hhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCC-ccHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VK-DS----ASWITLILGYGMLGELDVAINLFEAMRED----GVE-YYPVSHIGVL 72 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~-~~----~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~-p~~~~~~~ll 72 (118)
+-..+...|++++|+..|++.. .| +. ..|..+-..|...|++++|...|++..+. +-. .....+..+-
T Consensus 54 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 133 (411)
T 4a1s_A 54 EGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLG 133 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 4456788999999999998775 23 33 47888889999999999999999998643 222 3457788889
Q ss_pred HHHhcCCChhhHHHHHHHHhhc----CC-CccHHHHHHHHHHHHHccc
Q 046694 73 TACSLGGLVEKGKKFFDEMQAR----NV-KPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~m~~~----g~-~~~~~t~~~li~~~~~~g~ 115 (118)
..+...|++++|...+++..+. +- .....++..+-.+|...|+
T Consensus 134 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 134 NTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999987443 21 2235577788888888776
No 148
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.90 E-value=0.00013 Score=48.56 Aligned_cols=90 Identities=7% Similarity=-0.107 Sum_probs=74.9
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
|..+-.+|.+.|++++|+..|++.. ..+...|..+-.+|...|++++|...|++..+.. +-+...+..+-..+.+.
T Consensus 199 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~ 277 (336)
T 1p5q_A 199 HLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY-PNNKAAKTQLAVCQQRI 277 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHH
Confidence 4567778899999999999999765 4588899999999999999999999999998752 23677888888999999
Q ss_pred CChhhH-HHHHHHHh
Q 046694 79 GLVEKG-KKFFDEMQ 92 (118)
Q Consensus 79 ~~~~~a-~~~~~~m~ 92 (118)
|+.+++ .++|+.|.
T Consensus 278 ~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 278 RRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988 45666663
No 149
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.88 E-value=0.00048 Score=36.08 Aligned_cols=84 Identities=13% Similarity=0.124 Sum_probs=64.7
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...|..+-..+...|++++|...|++..+.. +.+...+..+-..+.+.|++++|.+.+++..+.. +.+...+..+-.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~l~~ 85 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 34567778888889999999999999987653 2367788888889999999999999999987653 234666777766
Q ss_pred HHHHcc
Q 046694 109 LLIKYN 114 (118)
Q Consensus 109 ~~~~~g 114 (118)
++.+.|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 665543
No 150
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.85 E-value=0.00091 Score=45.58 Aligned_cols=111 Identities=11% Similarity=0.112 Sum_probs=78.2
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC------------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc-----C-CCc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP------------VKDSASWITLILGYGMLGELDVAINLFEAMRED-----G-VEY 63 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~------------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-----~-~~p 63 (118)
||.|-..+...|++++|++.|++-. .....+|+.+-..|...|++++|...+++..+- + ..+
T Consensus 54 yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~ 133 (472)
T 4g1t_A 54 CNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRI 133 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccch
Confidence 6778888999999999999987542 225678999999999999999999999988542 1 122
Q ss_pred -cHHHHHHHHHHHhc--CCChhhHHHHHHHHhhcCCCc-cHHHHHHHHHHHHHcc
Q 046694 64 -YPVSHIGVLTACSL--GGLVEKGKKFFDEMQARNVKP-TETHYACMVYLLIKYN 114 (118)
Q Consensus 64 -~~~~~~~ll~~~~~--~~~~~~a~~~~~~m~~~g~~~-~~~t~~~li~~~~~~g 114 (118)
...+++..-.++.+ .+++++|...|++..+.. | ++..+..+..++.+.+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~--p~~~~~~~~~~~~~~~l~ 186 (472)
T 4g1t_A 134 ESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK--PKNPEFTSGLAIASYRLD 186 (472)
T ss_dssp CCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhc
Confidence 24455554444444 457999999999987643 4 3455555555544433
No 151
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.85 E-value=0.00029 Score=38.38 Aligned_cols=86 Identities=12% Similarity=-0.006 Sum_probs=63.8
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC-CCccHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN-VKPTETHYACMV 107 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g-~~~~~~t~~~li 107 (118)
+...|..+-..|...|++++|...|++..+.. +-+...|..+-.++.+.|++++|.+.|++..+.. -.++......+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 56677888888888999999999999887653 2256678888888889999999999988875432 234566666666
Q ss_pred HHHHHccc
Q 046694 108 YLLIKYNQ 115 (118)
Q Consensus 108 ~~~~~~g~ 115 (118)
..+.+.+.
T Consensus 85 ~~l~~~~~ 92 (100)
T 3ma5_A 85 DAKLKAEG 92 (100)
T ss_dssp HHHHHHHT
T ss_pred HHHHHccc
Confidence 66665554
No 152
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.84 E-value=0.00015 Score=50.14 Aligned_cols=87 Identities=10% Similarity=-0.093 Sum_probs=70.6
Q ss_pred HHHHHhcCCHHHHHHHhhhCC-------CC----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----cC-CCc-cHHH
Q 046694 6 LDFYTRTGRIDLANKIFDRLP-------VK----DSASWITLILGYGMLGELDVAINLFEAMRE-----DG-VEY-YPVS 67 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~-------~~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~-----~~-~~p-~~~~ 67 (118)
+..+.+.|++++|+.++++.. .+ -..+++.+...|...|++++|+.++++... .| -.| ...+
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 455677899999999997553 11 456899999999999999999999998853 22 234 3578
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHh
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
++.+-..|...|++++|..++++..
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 9999999999999999999999863
No 153
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.84 E-value=0.00011 Score=40.77 Aligned_cols=96 Identities=11% Similarity=0.053 Sum_probs=70.5
Q ss_pred HHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 18 ANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 18 a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
|+..|++.. ..+...|..+-..|...|++++|...|++..+.. +.+...|..+-.++...|+.++|...|++..+.
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445555432 3477889999999999999999999999998753 235778888999999999999999999998653
Q ss_pred CC-CccHHHHHHHHHHHHHcc
Q 046694 95 NV-KPTETHYACMVYLLIKYN 114 (118)
Q Consensus 95 g~-~~~~~t~~~li~~~~~~g 114 (118)
.- ..+......+...+.+.|
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhc
Confidence 22 134455555555554443
No 154
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.84 E-value=6.3e-05 Score=45.88 Aligned_cols=111 Identities=7% Similarity=-0.109 Sum_probs=77.2
Q ss_pred HHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-c---c-----------HHH
Q 046694 6 LDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVE-Y---Y-----------PVS 67 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p---~-----------~~~ 67 (118)
+......|+++++...|+.... .....+..+-..+...|++++|...|++..+..-. | . ...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 4445556777777777764432 25557778888899999999999999999764211 1 1 278
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-.++.+.|++++|...+++..+.. +.+...+..+-.+|.+.|+++
T Consensus 91 ~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~ 139 (198)
T 2fbn_A 91 NLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGVANMYFGFLE 139 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcccHH
Confidence 8888899999999999999999997753 346778888888888888764
No 155
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.80 E-value=0.00012 Score=51.36 Aligned_cols=85 Identities=9% Similarity=-0.078 Sum_probs=69.0
Q ss_pred HHHhcCCHHHHHHHhhhCC-------CC----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----cCC-Cc-cHHHHH
Q 046694 8 FYTRTGRIDLANKIFDRLP-------VK----DSASWITLILGYGMLGELDVAINLFEAMRE-----DGV-EY-YPVSHI 69 (118)
Q Consensus 8 ~~~~~~~~~~a~~~~~~m~-------~~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~-----~~~-~p-~~~~~~ 69 (118)
.+-..|++++|+.++++.. -+ -..+++.+...|...|++++|..++++..+ .|- .| ...+++
T Consensus 318 ~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 318 KARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 3557899999999887653 11 456899999999999999999999999853 222 24 457899
Q ss_pred HHHHHHhcCCChhhHHHHHHHHh
Q 046694 70 GVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 70 ~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
.+-..|...|++++|..++++..
T Consensus 398 nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 398 RAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHH
Confidence 99999999999999999999873
No 156
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.80 E-value=0.00026 Score=43.67 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=55.3
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTAC 75 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~ 75 (118)
+-.+|.+.|++++|+..|++.. ..+...|..+-..+...|++++|...|++..+. .| +...+..+-..+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--EADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHH
Confidence 6778899999999999998765 447889999999999999999999999999775 34 445555444443
No 157
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.80 E-value=4.7e-05 Score=49.80 Aligned_cols=115 Identities=8% Similarity=-0.011 Sum_probs=84.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-------CC--CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-------VK--DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-------~~--~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
|+.....|...|++++|...|++.. .+ -..+|+.+-..|.+.|++++|...|++..+. |-.. -..+
T Consensus 39 ~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~ 118 (307)
T 2ifu_A 39 YAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMA 118 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3445667888899999988887653 11 2458888999999999999999999987542 2111 2467
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhc----CCCc-cHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQAR----NVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
++.+-..|.+ |++++|...|++..+. |-.+ ...+++.+-.+|.+.|+.+
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 172 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFD 172 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHH
Confidence 8888888888 9999999999987542 2111 2567888888888888765
No 158
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.79 E-value=0.00012 Score=47.34 Aligned_cols=90 Identities=7% Similarity=-0.013 Sum_probs=71.9
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC-----CC-----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP-----VK-----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPV 66 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~-----~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~ 66 (118)
|+.+-..|...|++++|...|++.. .+ ...+|..+-..|.+.|++++|+..+++..+. +..+ -..
T Consensus 158 ~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~ 237 (293)
T 2qfc_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQ 237 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 5667788999999999999998754 22 2268899999999999999999999998542 2121 267
Q ss_pred HHHHHHHHHhcCCChhhH-HHHHHHH
Q 046694 67 SHIGVLTACSLGGLVEKG-KKFFDEM 91 (118)
Q Consensus 67 ~~~~ll~~~~~~~~~~~a-~~~~~~m 91 (118)
+|..+-..+.+.|+.++| ...+++.
T Consensus 238 ~~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 238 LYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 888899999999999999 7767765
No 159
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.78 E-value=0.00012 Score=47.08 Aligned_cols=111 Identities=12% Similarity=0.000 Sum_probs=84.3
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CC-C----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VK-D----SASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVSHIGVL 72 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~-~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~~~~ll 72 (118)
.-..+.+.|++++|..+|++.. .| + ...|..+...+...|++++|.+.+++..+. +-.| ....+..+-
T Consensus 11 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 90 (338)
T 3ro2_A 11 EGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG 90 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Confidence 3456788999999999999774 23 3 467888999999999999999999987532 2222 356788888
Q ss_pred HHHhcCCChhhHHHHHHHHhhc----CCCc-cHHHHHHHHHHHHHccc
Q 046694 73 TACSLGGLVEKGKKFFDEMQAR----NVKP-TETHYACMVYLLIKYNQ 115 (118)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~m~~~----g~~~-~~~t~~~li~~~~~~g~ 115 (118)
..+...|++++|...+++..+. +-.+ ...++..+-..|...|+
T Consensus 91 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 91 NTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999987442 1111 14477778888877776
No 160
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.00012 Score=39.90 Aligned_cols=85 Identities=14% Similarity=0.036 Sum_probs=63.8
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc-------HHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY-------PVSHIGV 71 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~-------~~~~~~l 71 (118)
|..+-..+.+.|++++|+..|++.. ..+...|..+-..+...|++++|.+.|++..+. .|+ ...+..+
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~ 84 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY--TSTAEHVAIRSKLQYRL 84 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--CSSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCccHHHHHHHHHHHH
Confidence 4456678889999999999998764 447888999999999999999999999998865 344 4445555
Q ss_pred HHHHhcCCChhhHHHHH
Q 046694 72 LTACSLGGLVEKGKKFF 88 (118)
Q Consensus 72 l~~~~~~~~~~~a~~~~ 88 (118)
-.++...|+.+.+...+
T Consensus 85 ~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 85 ELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHhHhhhHhHH
Confidence 55555556555554433
No 161
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.78 E-value=0.00058 Score=38.60 Aligned_cols=85 Identities=9% Similarity=-0.105 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~ 110 (118)
..+-.+-..+.+.|++++|...|++..+.. +-+...+..+-.++.+.|++++|...|++..+... -+...+..+-.+|
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-~~~~~~~~la~~~ 95 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKE-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-KDIAVHAALAVSH 95 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHH
Confidence 345566678889999999999999998752 23678888889999999999999999999977542 2577888888899
Q ss_pred HHccccc
Q 046694 111 IKYNQKA 117 (118)
Q Consensus 111 ~~~g~~~ 117 (118)
.+.|+.+
T Consensus 96 ~~~g~~~ 102 (121)
T 1hxi_A 96 TNEHNAN 102 (121)
T ss_dssp HHHHHHH
T ss_pred HHcCCHH
Confidence 8888765
No 162
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.76 E-value=6.6e-05 Score=52.73 Aligned_cols=93 Identities=8% Similarity=0.001 Sum_probs=74.2
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCC-------C---C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----cCCC-c
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLP-------V---K-DSASWITLILGYGMLGELDVAINLFEAMRE-----DGVE-Y 63 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~-------~---~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~-----~~~~-p 63 (118)
|++.|..+|...|++++|+.++++.. - | -..+++.|-..|...|++++|..++++..+ .|-. |
T Consensus 353 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp 432 (490)
T 3n71_A 353 LLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHP 432 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 46788999999999999999998764 1 2 456899999999999999999999998853 2322 4
Q ss_pred c-HHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 64 Y-PVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 64 ~-~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
+ ..+.+.+-.++...+.++.|+.+|.++.+
T Consensus 433 ~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 433 ITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 44556666777788999999999999855
No 163
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.76 E-value=0.00049 Score=53.94 Aligned_cols=56 Identities=11% Similarity=0.207 Sum_probs=43.5
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
+|..+-.++.+.|++++|+..|.+ ..|...|..++..+.+.|++++|.+.+..-++
T Consensus 1107 vWsqLAKAql~~G~~kEAIdsYiK--AdD~say~eVa~~~~~lGkyEEAIeyL~mArk 1162 (1630)
T 1xi4_A 1107 VWSQLAKAQLQKGMVKEAIDSYIK--ADDPSSYMEVVQAANTSGNWEELVKYLQMARK 1162 (1630)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHh--cCChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 366677778888888888888865 36777788888888888888888888866543
No 164
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.73 E-value=0.00055 Score=38.34 Aligned_cols=82 Identities=10% Similarity=-0.071 Sum_probs=62.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCccH---HHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCcc--HHHHHHHHHH
Q 046694 35 TLILGYGMLGELDVAINLFEAMREDGVEYYP---VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPT--ETHYACMVYL 109 (118)
Q Consensus 35 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~---~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~--~~t~~~li~~ 109 (118)
.+-..+...|++++|.+.|++..+..-. +. ..+..+-..+.+.|++++|...|++..+...... ...+..+-.+
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 4456677899999999999999875311 22 4777788889999999999999999977542211 5667788888
Q ss_pred HHHccccc
Q 046694 110 LIKYNQKA 117 (118)
Q Consensus 110 ~~~~g~~~ 117 (118)
+.+.|+.+
T Consensus 86 ~~~~g~~~ 93 (129)
T 2xev_A 86 QYGEGKNT 93 (129)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 88888764
No 165
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.70 E-value=0.00015 Score=50.24 Aligned_cols=82 Identities=7% Similarity=-0.147 Sum_probs=66.5
Q ss_pred cCCHHHHHHHhhhCC-------CC----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----cCC-Ccc-HHHHHHHHH
Q 046694 12 TGRIDLANKIFDRLP-------VK----DSASWITLILGYGMLGELDVAINLFEAMRE-----DGV-EYY-PVSHIGVLT 73 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~-------~~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~-----~~~-~p~-~~~~~~ll~ 73 (118)
.|++++|+.++++.. -| -..+++.+...|...|++++|..++++..+ .|- .|+ ..+++.+-.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 478899998887653 12 346899999999999999999999999853 232 343 578999999
Q ss_pred HHhcCCChhhHHHHHHHHhh
Q 046694 74 ACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~ 93 (118)
.|...|++++|..++++..+
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHH
Confidence 99999999999999998733
No 166
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.70 E-value=0.00047 Score=39.57 Aligned_cols=92 Identities=14% Similarity=0.101 Sum_probs=71.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCC-----C----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCc-cHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPV-----K----DSASWITLILGYGMLGELDVAINLFEAMRED----GVEY-YPVS 67 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~-----~----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p-~~~~ 67 (118)
+..+-..|...|++++|...|++... + ....+..+-..+...|++++|.+.+++..+. +-++ ....
T Consensus 52 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 131 (164)
T 3ro3_A 52 YSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRA 131 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHH
Confidence 44567788899999999999987541 1 2457788888999999999999999998542 2222 2466
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
+..+-..+...|++++|.+.+++..+
T Consensus 132 ~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 132 CWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 77888889999999999999998744
No 167
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.69 E-value=0.00048 Score=39.22 Aligned_cols=85 Identities=7% Similarity=-0.145 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC--Ccc----HHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV--KPT----ETHYA 104 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~--~~~----~~t~~ 104 (118)
..+..+-..+.+.|++++|+..|++..+.. +-+...|+.+-.+|.+.|++++|.+.+++..+... .++ ..+|.
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 456778888999999999999999988752 23678899999999999999999999999865321 111 12455
Q ss_pred HHHHHHHHcccc
Q 046694 105 CMVYLLIKYNQK 116 (118)
Q Consensus 105 ~li~~~~~~g~~ 116 (118)
.+-.++.+.|++
T Consensus 88 ~lg~~~~~~~~~ 99 (127)
T 4gcn_A 88 RAGNAFQKQNDL 99 (127)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHcCCH
Confidence 555555555554
No 168
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.69 E-value=0.00068 Score=44.96 Aligned_cols=114 Identities=8% Similarity=-0.169 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC-----CC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCC--c-cHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV-----KD----SASWITLILGYGMLGELDVAINLFEAMRED----GVE--Y-YPVS 67 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~-----~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~--p-~~~~ 67 (118)
.+-..+...|++++|...+++... .+ ..++..+-..+...|++++|...+++..+. +-. | ....
T Consensus 58 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 137 (373)
T 1hz4_A 58 VLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFL 137 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHH
Confidence 344556677888888777765531 11 123455666677778888888887777432 221 2 2345
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCC----ccHHHHHHHHHHHHHccccc
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVK----PTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~----~~~~t~~~li~~~~~~g~~~ 117 (118)
+..+-..+...|++++|...+++..+..-. ....++..+-..+...|+.+
T Consensus 138 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 191 (373)
T 1hz4_A 138 VRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLD 191 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHH
Confidence 555666777778888888888776442211 12345666666666666653
No 169
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.67 E-value=0.00045 Score=42.99 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=26.3
Q ss_pred HHHHhcCCHHHHHHHhhhCC--CCC----HhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 7 DFYTRTGRIDLANKIFDRLP--VKD----SASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~--~~~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
..+.+.|++++|+..|+++. .|+ ...+..+..+|.+.|++++|...|++..+
T Consensus 12 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 12 QQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34555555555555555543 121 23444455555555555555555555543
No 170
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.66 E-value=0.0011 Score=40.93 Aligned_cols=105 Identities=11% Similarity=0.009 Sum_probs=61.2
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC-CCHhhHHHHHHHHHhcC----CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc-
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV-KDSASWITLILGYGMLG----ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL- 77 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~-~~~~~~~~li~~~~~~~----~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~- 77 (118)
.|-..|...+++++|...|++... .+...+..+-..|.. + ++++|.+.|++..+.| +...+..+-..|..
T Consensus 23 ~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g---~~~a~~~Lg~~y~~g 98 (212)
T 3rjv_A 23 YLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG---SKSGEIVLARVLVNR 98 (212)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcC
Confidence 344556666777777777766542 355555555555655 5 6777777777765544 34445555555554
Q ss_pred ---CCChhhHHHHHHHHhhcCCC-ccHHHHHHHHHHHHH
Q 046694 78 ---GGLVEKGKKFFDEMQARNVK-PTETHYACMVYLLIK 112 (118)
Q Consensus 78 ---~~~~~~a~~~~~~m~~~g~~-~~~~t~~~li~~~~~ 112 (118)
.+++++|.++|++..+.|.. .+...+..|-.+|..
T Consensus 99 ~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 99 QAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp GGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 66777777777776665532 124445555555544
No 171
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.65 E-value=0.00074 Score=35.33 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=56.0
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
|..+-..+.+.|++++|+..|++.. ..+...|..+-..+.+.|++++|...|++..+.. +-+...+..+-..+.
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 3456677889999999999998764 3477788999999999999999999999987652 224455554444443
No 172
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00021 Score=47.58 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=74.0
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC--CCCH------------------hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP--VKDS------------------ASWITLILGYGMLGELDVAINLFEAMREDGVE 62 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~--~~~~------------------~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~ 62 (118)
..+-..+.+.|++++|...|++.. .|+. ..|..+-..|.+.|++++|+..+++..+.. +
T Consensus 183 ~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p 261 (338)
T 2if4_A 183 KMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEE-E 261 (338)
T ss_dssp HHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHC-T
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-C
Confidence 344566778899999999998754 3332 278888999999999999999999998753 2
Q ss_pred ccHHHHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 63 p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
-+...|..+-.++...|++++|...|++..+.
T Consensus 262 ~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 262 KNPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 36788999999999999999999999998653
No 173
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.64 E-value=0.0006 Score=53.50 Aligned_cols=97 Identities=22% Similarity=0.258 Sum_probs=74.0
Q ss_pred hcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHH
Q 046694 11 RTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDE 90 (118)
Q Consensus 11 ~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~ 90 (118)
..+++++|.++.++. .+..+|..+-.++...|++++|.+.|.+- -|...|..+...|.+.|++++|.+++..
T Consensus 1088 ~i~nldrAiE~Aerv--n~p~vWsqLAKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~m 1159 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERC--NEPAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQM 1159 (1630)
T ss_pred HHhhHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 455556666665544 35678889999999999999999999663 3788899999999999999999999998
Q ss_pred HhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 91 MQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 91 m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
-.+.. ++....+.+..+|++.++++
T Consensus 1160 Ark~~--~e~~Idt~LafaYAKl~rle 1184 (1630)
T 1xi4_A 1160 ARKKA--RESYVETELIFALAKTNRLA 1184 (1630)
T ss_pred HHhhc--ccccccHHHHHHHHhhcCHH
Confidence 76644 33333345888888877654
No 174
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.64 E-value=0.0017 Score=38.72 Aligned_cols=65 Identities=11% Similarity=-0.016 Sum_probs=53.0
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
+...+..+-..+...|++++|...|++..+..-.+ +...+..+...+...|+.++|...|++...
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 45667777788889999999999999998764332 356888999999999999999999987643
No 175
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.61 E-value=0.0018 Score=40.22 Aligned_cols=62 Identities=11% Similarity=-0.056 Sum_probs=37.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-c-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 33 WITLILGYGMLGELDVAINLFEAMREDGVE-Y-YPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
+-.+...+.+.|++++|...|+++.+..-. | ....+..+..++.+.|++++|...|+++.+.
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 334445566667777777777776653211 1 1345555666667777777777777776553
No 176
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.50 E-value=0.00091 Score=37.22 Aligned_cols=75 Identities=9% Similarity=-0.006 Sum_probs=58.0
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc-CCCccHHHHHHHHHHHh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMRED-GVEYYPVSHIGVLTACS 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-~~~p~~~~~~~ll~~~~ 76 (118)
|..+..+|.+.|++++|+..|++.. ..+...+..+-..+...|++++|...|++..+. .-.|+...|...+..+.
T Consensus 30 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~ 108 (117)
T 3k9i_A 30 YLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAILFYA 108 (117)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 4567778999999999999999775 347788999999999999999999999998764 22344445555555544
No 177
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.49 E-value=0.0027 Score=41.01 Aligned_cols=87 Identities=3% Similarity=-0.208 Sum_probs=72.2
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
+...+..+-..+.+.|++++|...|++..+.. +-+...|..+-.++.+.|++++|.+.+++..+.. +.+...+..+-.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~ 80 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFLGQ 80 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHH
Confidence 45567778888999999999999999998752 2278889999999999999999999999997753 335778888888
Q ss_pred HHHHccccc
Q 046694 109 LLIKYNQKA 117 (118)
Q Consensus 109 ~~~~~g~~~ 117 (118)
+|.+.|+++
T Consensus 81 ~~~~~g~~~ 89 (281)
T 2c2l_A 81 CQLEMESYD 89 (281)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 998888765
No 178
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.48 E-value=0.00044 Score=37.66 Aligned_cols=58 Identities=17% Similarity=0.060 Sum_probs=49.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMRED 59 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~ 59 (118)
|..+-.+|.+.|++++|+..|++.. ..+...|..+-..|...|++++|.+.|++..+.
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4556778899999999999999775 346778999999999999999999999998643
No 179
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.37 E-value=0.0087 Score=41.37 Aligned_cols=47 Identities=11% Similarity=-0.009 Sum_probs=19.3
Q ss_pred cCCHHHHHHHhhhCC-CCCHhhHHHHHHHHHh----cCCHHHHHHHHHHHHH
Q 046694 12 TGRIDLANKIFDRLP-VKDSASWITLILGYGM----LGELDVAINLFEAMRE 58 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~-~~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~ 58 (118)
.++.++|...|++.. ..+...+..+-..|.. .+++++|.+.|++..+
T Consensus 92 ~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 344444444444332 1133333333333433 3444444444444443
No 180
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.37 E-value=0.0023 Score=42.41 Aligned_cols=114 Identities=11% Similarity=-0.009 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC----C---C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc-HHHHH-----
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP----V---K-DSASWITLILGYGMLGELDVAINLFEAMREDGVEYY-PVSHI----- 69 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~----~---~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~-~~~~~----- 69 (118)
.+-..+...|++++|...+++.. . + ....|..+-..+...|++++|...+++.....-.++ ...+.
T Consensus 140 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~ 219 (373)
T 1hz4_A 140 IRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANK 219 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHH
Confidence 45567788999999999998653 1 1 235677788888999999999999999865311111 11111
Q ss_pred HHHHHHhcCCChhhHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHccccc
Q 046694 70 GVLTACSLGGLVEKGKKFFDEMQARNVKP---TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 70 ~ll~~~~~~~~~~~a~~~~~~m~~~g~~~---~~~t~~~li~~~~~~g~~~ 117 (118)
.....+...|+++.|...+++..+....+ ....+..+...+...|+.+
T Consensus 220 ~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 270 (373)
T 1hz4_A 220 VRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFE 270 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHH
Confidence 23344778999999999999886543221 1234566777777777654
No 181
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.33 E-value=0.0021 Score=37.72 Aligned_cols=87 Identities=8% Similarity=-0.120 Sum_probs=69.7
Q ss_pred HhhHHHHHHHHHhcCCHHHHHHHHHHHHHc--------C---------CCccHHHHHHHHHHHhcCCChhhHHHHHHHHh
Q 046694 30 SASWITLILGYGMLGELDVAINLFEAMRED--------G---------VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 30 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~--------~---------~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
...+...-..+.+.|++++|+..|.+..+. . -+-+...|..+-.++.+.|++++|...+++..
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 345667778888999999999999998654 0 11234678889999999999999999999997
Q ss_pred hcCCCccHHHHHHHHHHHHHccccc
Q 046694 93 ARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 93 ~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+.. +.+...|..+-.+|...|+++
T Consensus 91 ~~~-p~~~~a~~~~g~~~~~~g~~~ 114 (162)
T 3rkv_A 91 KRE-ETNEKALFRRAKARIAAWKLD 114 (162)
T ss_dssp HHS-TTCHHHHHHHHHHHHHTTCHH
T ss_pred hcC-CcchHHHHHHHHHHHHHhcHH
Confidence 753 335788888999999988865
No 182
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.32 E-value=0.00053 Score=47.81 Aligned_cols=86 Identities=14% Similarity=-0.035 Sum_probs=65.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHH--H
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTA--C 75 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~--~ 75 (118)
|..+-.+|.+.|++++|+..|++.. ..+...|..+-..|...|++++|.+.|++..+.. | +...+..+-.+ +
T Consensus 43 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--p~~~~~~~~l~~~~~~ 120 (477)
T 1wao_1 43 YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK--PHDKDAKMKYQECNKI 120 (477)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHH
Confidence 5567788999999999999998664 4478899999999999999999999999997652 3 33344444444 7
Q ss_pred hcCCChhhHHHHHH
Q 046694 76 SLGGLVEKGKKFFD 89 (118)
Q Consensus 76 ~~~~~~~~a~~~~~ 89 (118)
.+.|++++|.++++
T Consensus 121 ~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 121 VKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHCCC-----
T ss_pred HHHHHHHHHhcccc
Confidence 88899999999988
No 183
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.26 E-value=0.0011 Score=35.50 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=31.7
Q ss_pred HHHHhcCCHHHHHHHhhhCC---CCCHh-hHHHHHHHHHhcCCHHHHHHHHHHHHHc
Q 046694 7 DFYTRTGRIDLANKIFDRLP---VKDSA-SWITLILGYGMLGELDVAINLFEAMRED 59 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~---~~~~~-~~~~li~~~~~~~~~~~a~~~~~~m~~~ 59 (118)
..+.+.|++++|+..|++.. ..+.. .|..+-..|...|++++|.+.|++..+.
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 44556666666666666543 22444 5666666666666666666666666543
No 184
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.26 E-value=0.014 Score=40.33 Aligned_cols=81 Identities=10% Similarity=-0.052 Sum_probs=42.8
Q ss_pred cCCHHHHHHHhhhCC-CCCHhhHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc----CCChh
Q 046694 12 TGRIDLANKIFDRLP-VKDSASWITLILGYGM----LGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL----GGLVE 82 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~-~~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~~~~~ 82 (118)
.+++++|...|++.. ..+...+..+-..|.. .+++++|.+.|++..+.| +...+..+-..|.+ .++.+
T Consensus 128 ~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~ 204 (490)
T 2xm6_A 128 KVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERNDA 204 (490)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCHH
Confidence 456666666665543 2244445555555544 456666666666655543 34444444444444 55566
Q ss_pred hHHHHHHHHhhcC
Q 046694 83 KGKKFFDEMQARN 95 (118)
Q Consensus 83 ~a~~~~~~m~~~g 95 (118)
+|.++|++..+.|
T Consensus 205 ~A~~~~~~a~~~~ 217 (490)
T 2xm6_A 205 ISAQWYRKSATSG 217 (490)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 6666665554443
No 185
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.26 E-value=0.0092 Score=36.77 Aligned_cols=106 Identities=10% Similarity=-0.028 Sum_probs=74.4
Q ss_pred HHHHHHhcC----CHHHHHHHhhhCCC-CCHhhHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCC-ccHHHHHHHHHH
Q 046694 5 RLDFYTRTG----RIDLANKIFDRLPV-KDSASWITLILGYGM----LGELDVAINLFEAMREDGVE-YYPVSHIGVLTA 74 (118)
Q Consensus 5 ll~~~~~~~----~~~~a~~~~~~m~~-~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~ 74 (118)
|-..|.. + ++++|...|++... .+...+..+-..|.. .+++++|.+.|++..+.|.. -+...+..+-..
T Consensus 56 lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~ 134 (212)
T 3rjv_A 56 LAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLI 134 (212)
T ss_dssp HHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 3344444 5 89999999987753 366777777777776 78999999999988766532 125666677777
Q ss_pred Hhc----CCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 75 CSL----GGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 75 ~~~----~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
|.. .++.++|.++|++..+. ..+...+..|-.+|.+.
T Consensus 135 y~~g~g~~~d~~~A~~~~~~A~~~--~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 135 YASGVHGPEDDVKASEYFKGSSSL--SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp HHHTSSSSCCHHHHHHHHHHHHHT--SCTTHHHHHHHHHHHHC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHcC
Confidence 776 77899999999998776 22344566666666543
No 186
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.15 E-value=0.00095 Score=40.06 Aligned_cols=100 Identities=15% Similarity=0.030 Sum_probs=76.3
Q ss_pred HhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCC----------HHHHHHHHHHHHHcCCCc-cHHHHHHHHHHH
Q 046694 10 TRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGE----------LDVAINLFEAMREDGVEY-YPVSHIGVLTAC 75 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~----------~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~ 75 (118)
.+.+.+++|.+.+++.. ..+...|+.+-.++...++ +++|+..|++..+- .| +...|..+-.+|
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--dP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--DPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--CcCcHHHHHHHHHHH
Confidence 45567888888888654 4477888878778887765 45999999998765 45 567888888888
Q ss_pred hcCC-----------ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 76 SLGG-----------LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 76 ~~~~-----------~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
...| ++++|.+.|++..+ +.|+...|..-+...-+.
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~--l~P~~~~y~~al~~~~ka 137 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVD--EQPDNTHYLKSLEMTAKA 137 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHTH
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHhC
Confidence 8764 89999999999987 577777777766665443
No 187
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.13 E-value=0.0021 Score=44.52 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=70.4
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~ 77 (118)
|..+-.+|.+.|++++|+..|++.. ..+...|..+-.+|...|++++|...|++..+. .| +...+..+-..+.+
T Consensus 320 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 320 FLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQISMCQKK 397 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 4566778899999999999998765 457889999999999999999999999998765 44 56778888888888
Q ss_pred CCChhhHH-HHHHHH
Q 046694 78 GGLVEKGK-KFFDEM 91 (118)
Q Consensus 78 ~~~~~~a~-~~~~~m 91 (118)
.++.+++. .++..|
T Consensus 398 ~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 398 AKEHNERDRRIYANM 412 (457)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 88888766 445555
No 188
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.12 E-value=0.0039 Score=45.53 Aligned_cols=110 Identities=9% Similarity=-0.055 Sum_probs=67.2
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCC-------------C------------CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPV-------------K------------DSASWITLILGYGMLGELDVAINLFEAMRED 59 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~-------------~------------~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~ 59 (118)
.+...-+.|++++|..+|++... | ....|...+....+.|..+.|..+|.+..+.
T Consensus 384 ~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 384 LSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34445567888888888876642 2 1235777777777778888888888888765
Q ss_pred -C-CCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 60 -G-VEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 60 -~-~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+ ..+......+.+.-.. .++.+.|.++|+...+. ++-+...|...++...+.|+.
T Consensus 464 ~~~~~~~lyi~~A~lE~~~-~~d~e~Ar~ife~~Lk~-~p~~~~~w~~y~~fe~~~~~~ 520 (679)
T 4e6h_A 464 KKLVTPDIYLENAYIEYHI-SKDTKTACKVLELGLKY-FATDGEYINKYLDFLIYVNEE 520 (679)
T ss_dssp GGGSCTHHHHHHHHHHHTT-TSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCH
T ss_pred cCCCChHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHhCCCH
Confidence 2 1223333333333222 24578888888887664 444566666666666655543
No 189
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.0043 Score=41.74 Aligned_cols=115 Identities=12% Similarity=-0.003 Sum_probs=79.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCC-----CC---H-hhHHHHHHHHHhcCCHHHHHHHHHHHHH----cCCCc-cHHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPV-----KD---S-ASWITLILGYGMLGELDVAINLFEAMRE----DGVEY-YPVSH 68 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~-----~~---~-~~~~~li~~~~~~~~~~~a~~~~~~m~~----~~~~p-~~~~~ 68 (118)
..|...|.+.|++++|..++.+... ++ . .+.+.+-..+...|+.+++..++++... .+..+ -..++
T Consensus 59 ~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 138 (434)
T 4b4t_Q 59 LELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLS 138 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 4577889999999999999987751 11 1 1223333334445889999999888743 33333 35677
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHhhc--CC--Cc-cHHHHHHHHHHHHHccccc
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEMQAR--NV--KP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m~~~--g~--~~-~~~t~~~li~~~~~~g~~~ 117 (118)
..+...+...|++++|..++++.... +. .| ....+..+.+.|...|+++
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLA 192 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHH
Confidence 88889999999999999999887331 11 22 2567888888888888764
No 190
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.10 E-value=0.0023 Score=35.26 Aligned_cols=58 Identities=16% Similarity=-0.018 Sum_probs=49.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMRED 59 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~ 59 (118)
|..+...|.+.|++++|+..|++.. ..+...|..+-..|...|++++|...|++..+.
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4556778899999999999998764 346778999999999999999999999998653
No 191
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.05 E-value=0.012 Score=40.04 Aligned_cols=105 Identities=10% Similarity=-0.056 Sum_probs=71.4
Q ss_pred CHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHH--HHHHHHH-HHhcCCChhhHHHH
Q 046694 14 RIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV--SHIGVLT-ACSLGGLVEKGKKF 87 (118)
Q Consensus 14 ~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~--~~~~ll~-~~~~~~~~~~a~~~ 87 (118)
.+++|...|++.. ..+..++..+-..|...|++++|.+.|++..+....|... .+..+.. ...+.|+.++|...
T Consensus 315 ~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~ 394 (472)
T 4g1t_A 315 LIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHH 394 (472)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred hHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3556677776543 3466788889999999999999999999988765443321 2222222 23467899999998
Q ss_pred HHHHhhcCC-----------------------CccHHHHHHHHHHHHHcccccC
Q 046694 88 FDEMQARNV-----------------------KPTETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 88 ~~~m~~~g~-----------------------~~~~~t~~~li~~~~~~g~~~~ 118 (118)
|++..+... +.+..+|..+-.+|.+.|+.++
T Consensus 395 y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~ 448 (472)
T 4g1t_A 395 FIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQ 448 (472)
T ss_dssp HHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC-
T ss_pred HHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 888755321 2346778888888888887653
No 192
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.00 E-value=0.015 Score=34.89 Aligned_cols=86 Identities=13% Similarity=-0.038 Sum_probs=63.9
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-c-----c-----HHHHHHHHHHHhcCCChhhHHHHHHHHhhc-----C
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVE-Y-----Y-----PVSHIGVLTACSLGGLVEKGKKFFDEMQAR-----N 95 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p-----~-----~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~-----g 95 (118)
.+...-..+.+.|++++|+..|++..+..-. | + ...|+..-.++.+.|++++|...+++..+. .
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 3455566778899999999999998764211 0 2 338999999999999999999999998774 2
Q ss_pred CCcc-HHHH----HHHHHHHHHccccc
Q 046694 96 VKPT-ETHY----ACMVYLLIKYNQKA 117 (118)
Q Consensus 96 ~~~~-~~t~----~~li~~~~~~g~~~ 117 (118)
+.|+ ...| ...=.++...|+++
T Consensus 93 ~~pd~~~A~~~~~~~rG~aL~~lgr~e 119 (159)
T 2hr2_A 93 LNQDEGKLWISAVYSRALALDGLGRGA 119 (159)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCchHHHHHHHHHhHHHHHHHCCCHH
Confidence 2554 5566 66777777777654
No 193
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.96 E-value=0.012 Score=31.22 Aligned_cols=59 Identities=14% Similarity=-0.006 Sum_probs=48.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCCccHH-HHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 36 LILGYGMLGELDVAINLFEAMREDGVEYYPV-SHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 36 li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~-~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
....+.+.|++++|.+.|++..+.. +-+.. .+..+-.++.+.|++++|.+.|++..+..
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 3456678899999999999998753 22556 88888899999999999999999997754
No 194
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.90 E-value=0.0065 Score=40.98 Aligned_cols=83 Identities=11% Similarity=-0.069 Sum_probs=65.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhc
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSL 77 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~ 77 (118)
|..+-.+|.+.|++++|+..+++.. ..+...|..+-.+|...|++++|.+.|++..+. .| +...+..+-..+.+
T Consensus 276 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 276 VLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHH
Confidence 4566778899999999999998764 347788999999999999999999999998765 34 56666666667666
Q ss_pred CCChhhHHH
Q 046694 78 GGLVEKGKK 86 (118)
Q Consensus 78 ~~~~~~a~~ 86 (118)
.++.+++.+
T Consensus 354 ~~~~~~a~k 362 (370)
T 1ihg_A 354 IKAQKDKEK 362 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665543
No 195
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=96.88 E-value=0.018 Score=31.90 Aligned_cols=70 Identities=10% Similarity=0.086 Sum_probs=56.7
Q ss_pred HHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 046694 40 YGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110 (118)
Q Consensus 40 ~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~ 110 (118)
+-+.. +.-++.+.++.+-...+.|++.+..+.|++|-+.+++..|.++++-.+.+ +.+...+|..+++-+
T Consensus 19 F~~~~iD~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K-~~~~~~iY~~~lqEl 89 (109)
T 1v54_E 19 FNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQEL 89 (109)
T ss_dssp HTCTTCCHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHHHH
T ss_pred cCCcCccHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hcCchhhHHHHHHHH
Confidence 33444 67788889999988899999999999999999999999999999999543 333456788877654
No 196
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.75 E-value=0.0083 Score=43.87 Aligned_cols=115 Identities=9% Similarity=-0.014 Sum_probs=75.6
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCCC----CHhhHHHHHHHHHhc-CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPVK----DSASWITLILGYGML-GELDVAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~~----~~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
|-..+...-+.|+++.|+.+|++.... ....|......--+. ++.+.|.++|+...+. .+-+...+...++-..
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~-~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKY-FATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 334455556678889999999876421 222333222222233 4589999999988765 3335566677777777
Q ss_pred cCCChhhHHHHHHHHhhcCCCc--cHHHHHHHHHHHHHccccc
Q 046694 77 LGGLVEKGKKFFDEMQARNVKP--TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 77 ~~~~~~~a~~~~~~m~~~g~~~--~~~t~~~li~~~~~~g~~~ 117 (118)
..|+.+.|..+|++.......+ ....|...++.-.+.|+.+
T Consensus 516 ~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~ 558 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLN 558 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSH
T ss_pred hCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 8899999999999887654322 4567888888777777653
No 197
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=96.75 E-value=0.033 Score=32.90 Aligned_cols=86 Identities=8% Similarity=-0.090 Sum_probs=69.5
Q ss_pred HhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHH
Q 046694 10 TRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFD 89 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~ 89 (118)
..+|++.+....|-.+.. +..-.+..++.....|.-++..++..++.. +-+|++...-.+-.+|.+.|+..++.+++.
T Consensus 72 s~C~NlKrVi~C~~~~n~-~se~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~ 149 (172)
T 1wy6_A 72 DKCQNLKSVVECGVINNT-LNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDATTLLI 149 (172)
T ss_dssp GGCSCTHHHHHHHHHTTC-CCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhhhcHHHHHHHHHHhcc-hHHHHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHH
Confidence 356777777777766653 334577888999999999999999999644 347888889999999999999999999999
Q ss_pred HHhhcCCC
Q 046694 90 EMQARNVK 97 (118)
Q Consensus 90 ~m~~~g~~ 97 (118)
+.-+.|++
T Consensus 150 ~AC~kG~k 157 (172)
T 1wy6_A 150 EACKKGEK 157 (172)
T ss_dssp HHHHTTCH
T ss_pred HHHHhhhH
Confidence 99998974
No 198
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.70 E-value=0.002 Score=44.57 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=49.8
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCC----------CC-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLP----------VK-DSASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~----------~~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
|++.|..+|...|++++|+.++++.. -| -..+++.+-..|...|++++|+.++++..+
T Consensus 342 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 342 MMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 46889999999999999999998764 12 456899999999999999999999999753
No 199
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.66 E-value=0.011 Score=39.18 Aligned_cols=86 Identities=6% Similarity=-0.137 Sum_probs=69.4
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHH------------------HHHHHHHHHhcCCChhhHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV------------------SHIGVLTACSLGGLVEKGKKFFDE 90 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~------------------~~~~ll~~~~~~~~~~~a~~~~~~ 90 (118)
....+..+-..+.+.|++++|...|++..+. .|+.. .|..+-.++.+.|++++|...+++
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~--~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAY--MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHH--SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH--hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3445677778888899999999999997654 34432 788889999999999999999999
Q ss_pred HhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 91 MQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 91 m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
..+.. +.+...|..+-.+|...|+++
T Consensus 256 al~~~-p~~~~a~~~lg~a~~~~g~~~ 281 (338)
T 2if4_A 256 VLTEE-EKNPKALFRRGKAKAELGQMD 281 (338)
T ss_dssp HHHHC-TTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHhC-CCCHHHHHHHHHHHHHcCCHH
Confidence 97753 336788889999999888765
No 200
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.56 E-value=0.041 Score=31.59 Aligned_cols=84 Identities=7% Similarity=-0.142 Sum_probs=50.8
Q ss_pred HhcCCHHHHHHHhhhCC-CCCHhhHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc----CCC
Q 046694 10 TRTGRIDLANKIFDRLP-VKDSASWITLILGYGM----LGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL----GGL 80 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~-~~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~~~ 80 (118)
...+.+++|.+.|++-- ..+...+..+-..|.. .+++++|.+.|++..+.| +...+..+-..|.. .++
T Consensus 36 ~~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d 112 (138)
T 1klx_A 36 NSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKN 112 (138)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCC
T ss_pred HcCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcC
Confidence 33445666666666543 3355566666666665 567777777777766654 34445555555555 667
Q ss_pred hhhHHHHHHHHhhcCC
Q 046694 81 VEKGKKFFDEMQARNV 96 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~ 96 (118)
.++|.++|++..+.|.
T Consensus 113 ~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 113 EKQAVKTFEKACRLGS 128 (138)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCC
Confidence 7777777777666653
No 201
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=96.44 E-value=0.051 Score=31.80 Aligned_cols=65 Identities=11% Similarity=0.083 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 046694 45 ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLL 110 (118)
Q Consensus 45 ~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~ 110 (118)
|.-+..+-++.+-...+.|++.+..+.|++|-+.+++..|.++++-.+.+ +.+...+|..+++-+
T Consensus 68 D~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lqEl 132 (152)
T 2y69_E 68 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQEL 132 (152)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHHHH
Confidence 67778888888888889999999999999999999999999999999553 344466788887654
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.36 E-value=0.0041 Score=42.93 Aligned_cols=58 Identities=10% Similarity=-0.045 Sum_probs=49.3
Q ss_pred CchHHHHHHHhcCCHHHHHHHhhhCC-------C---C-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 1 MIEPRLDFYTRTGRIDLANKIFDRLP-------V---K-DSASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 1 t~~~ll~~~~~~~~~~~a~~~~~~m~-------~---~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
+++.|..+|...|++++|+.++++.. - | -..+++.+-..|...|++++|+.++++..+
T Consensus 331 ~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 331 VLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 46788999999999999999998664 1 2 456899999999999999999999998853
No 203
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.33 E-value=0.05 Score=37.00 Aligned_cols=73 Identities=15% Similarity=0.068 Sum_probs=59.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHH-----hhcCCCccHHHHHHH
Q 046694 33 WITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEM-----QARNVKPTETHYACM 106 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m-----~~~g~~~~~~t~~~l 106 (118)
...++..+...|+++++...+..+... -+.+...+..++.++.+.|+..+|.+.|+.. .+.|+.|...+-...
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~-~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~ 251 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFE-HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 345667777889999999999988654 2458889999999999999999999999986 457999987765443
No 204
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.26 E-value=0.057 Score=39.26 Aligned_cols=81 Identities=14% Similarity=0.102 Sum_probs=53.3
Q ss_pred HHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-------CccH-------------HHH
Q 046694 9 YTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGV-------EYYP-------------VSH 68 (118)
Q Consensus 9 ~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~-------~p~~-------------~~~ 68 (118)
....|++++|.++.+.+. +...|..+-..+.+.++++.|.++|.++.+..- .-+. .-+
T Consensus 662 ~l~~~~~~~A~~~~~~~~--~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~ 739 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTDES--AEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKF 739 (814)
T ss_dssp HHHHTCHHHHHHHHTTCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred hhhcCCHHHHHHHHHhhC--cHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCch
Confidence 345677777777776654 557888999999999999999999988742110 0011 123
Q ss_pred HHHHHHHhcCCChhhHHHHHHHH
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
+.....|.+.|++++|.+++.++
T Consensus 740 ~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 740 NLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHc
Confidence 33455566677777777777665
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.25 E-value=0.061 Score=36.59 Aligned_cols=74 Identities=7% Similarity=-0.027 Sum_probs=60.0
Q ss_pred CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHH
Q 046694 28 KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYAC 105 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~ 105 (118)
.+...|..+-..+...|++++|...+++....+ |+...|..+-..+.-.|++++|.+.|++.... .|...||..
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL--~P~~~t~~~ 348 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL--RPGANTLYW 348 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCSHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CCCcChHHH
Confidence 466777777777777899999999999998875 78888888888888999999999999988774 455556543
No 206
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.25 E-value=0.099 Score=35.98 Aligned_cols=100 Identities=17% Similarity=0.121 Sum_probs=50.1
Q ss_pred HHHHHHhcC---CHHHHHHHhhhCC---CCCHhhHHHHHHHHHhc----CCHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 046694 5 RLDFYTRTG---RIDLANKIFDRLP---VKDSASWITLILGYGML----GELDVAINLFEAMREDGVEYYPVSHIGVLTA 74 (118)
Q Consensus 5 ll~~~~~~~---~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~----~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 74 (118)
|-..|.+.| +.++|...|++.. .++...+..+-..|... +++++|.+.|++.. .| +...+..+-..
T Consensus 182 Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g---~~~a~~~Lg~~ 257 (452)
T 3e4b_A 182 LATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG---YPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG---STHHHHHHHHH
T ss_pred HHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC---CHHHHHHHHHH
Confidence 344455555 6666666665443 22333334444444333 46666666666655 22 22223333222
Q ss_pred -H--hcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q 046694 75 -C--SLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLI 111 (118)
Q Consensus 75 -~--~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~ 111 (118)
+ ...++.++|.++|++..+.| +...+..|-.+|.
T Consensus 258 ~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 258 LYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY 294 (452)
T ss_dssp HHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH
Confidence 2 34666777777777666655 4444444444444
No 207
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.044 Score=36.78 Aligned_cols=90 Identities=9% Similarity=-0.116 Sum_probs=68.8
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC--------CC-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCcc--HHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP--------VK-DSASWITLILGYGMLGELDVAINLFEAMRED----GVEYY--PVS 67 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~--------~~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~~p~--~~~ 67 (118)
..|...|...|++++|..++++.. .+ ....|..++..|...|++++|..++++.... +.+|. ...
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 218 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAEL 218 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHH
Confidence 457788889999999998887653 11 4558889999999999999999999987532 22222 356
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHh
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
+..+...+...+++++|...|.+..
T Consensus 219 ~~~~g~~~~~~~~y~~A~~~~~~a~ 243 (434)
T 4b4t_Q 219 DLMSGILHCEDKDYKTAFSYFFESF 243 (434)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 6777778888999999988877763
No 208
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=95.95 E-value=0.19 Score=34.62 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=69.3
Q ss_pred HHHHHhcC----CHHHHHHHhhhCCCCCHhhHHHHHHHHHhcC---CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC
Q 046694 6 LDFYTRTG----RIDLANKIFDRLPVKDSASWITLILGYGMLG---ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG 78 (118)
Q Consensus 6 l~~~~~~~----~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~---~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~ 78 (118)
-..|...+ +.+.+..++......+...+..+-..|.+.| +.++|++.|++..+.|- ++...+..+-..|...
T Consensus 148 g~~y~~~~~~~~~~~~a~~~~~~a~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~-~~a~~~~~Lg~~y~~g 226 (452)
T 3e4b_A 148 VLLYRTQGTYDQHLDDVERICKAALNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGT-VTAQRVDSVARVLGDA 226 (452)
T ss_dssp HHHHHHHTCGGGGHHHHHHHHHHHTTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC-SCHHHHHHHHHHHTCG
T ss_pred HHHHHcCCCcccCHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHhCC
Confidence 34444444 4556666776666666668888889999999 89999999999988773 4455445555555544
Q ss_pred ----CChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 79 ----GLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 79 ----~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
++.++|.++|++.. .| +...+..|-..
T Consensus 227 ~~~~~d~~~A~~~~~~aa-~g---~~~a~~~Lg~~ 257 (452)
T 3e4b_A 227 TLGTPDEKTAQALLEKIA-PG---YPASWVSLAQL 257 (452)
T ss_dssp GGSSCCHHHHHHHHHHHG-GG---STHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHc-CC---CHHHHHHHHHH
Confidence 78999999999987 33 45555555555
No 209
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.94 E-value=0.099 Score=29.92 Aligned_cols=93 Identities=8% Similarity=-0.073 Sum_probs=67.9
Q ss_pred cCCHHHHHHHhhhCCC-CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc----CCChhhHHH
Q 046694 12 TGRIDLANKIFDRLPV-KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSL----GGLVEKGKK 86 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~~-~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~~~~~~a~~ 86 (118)
.+++++|...|++.-. .+.... +-..|...+.+++|.+.|++..+.| +...+..+-..|.. .++.++|.+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFGC--LSLVSNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHH--HHHHTCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHhhh--HHHHHHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 3578899999986642 233344 5566666678999999999998875 55666666666766 789999999
Q ss_pred HHHHHhhcCCCccHHHHHHHHHHHHH
Q 046694 87 FFDEMQARNVKPTETHYACMVYLLIK 112 (118)
Q Consensus 87 ~~~~m~~~g~~~~~~t~~~li~~~~~ 112 (118)
+|++..+.| +...+..|-..|..
T Consensus 83 ~~~~Aa~~g---~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 83 YYSKACGLN---DQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHC
Confidence 999998876 45566666666655
No 210
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.67 E-value=0.087 Score=38.32 Aligned_cols=80 Identities=13% Similarity=0.003 Sum_probs=50.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCCC-----------CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPVK-----------DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIG 70 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~~-----------~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ 70 (118)
|..|-..+.+.|+++.|++.|.++... +......+.......|++..|..+|-+. --+..
T Consensus 684 W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~---------g~~~~ 754 (814)
T 3mkq_A 684 WRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIA---------GDIQG 754 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH---------TCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHc---------CCHHH
Confidence 677888888999999999999877632 2222223333334444444444444332 12445
Q ss_pred HHHHHhcCCChhhHHHHHHH
Q 046694 71 VLTACSLGGLVEKGKKFFDE 90 (118)
Q Consensus 71 ll~~~~~~~~~~~a~~~~~~ 90 (118)
.++.|.+.+++++|..+-+.
T Consensus 755 a~~~~~~~~~~~~A~~lA~~ 774 (814)
T 3mkq_A 755 AKDLLIKSQRFSEAAFLGST 774 (814)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHH
Confidence 67888888898888887665
No 211
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.57 E-value=0.28 Score=32.42 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=71.5
Q ss_pred HHHHHHHhhhCC--CC---CHhhHHHHHHHHHhc-----CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC-CChhh
Q 046694 15 IDLANKIFDRLP--VK---DSASWITLILGYGML-----GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG-GLVEK 83 (118)
Q Consensus 15 ~~~a~~~~~~m~--~~---~~~~~~~li~~~~~~-----~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~-~~~~~ 83 (118)
..+|...+++.. .| +-..|..+-..|.+. |+.++|.+.|++-.+-+-.-+..++...-+.+++. |+.+.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 345555565543 34 466899999999995 99999999999998753211477777888888885 99999
Q ss_pred HHHHHHHHhhcCCC--ccHHHHHHHHH
Q 046694 84 GKKFFDEMQARNVK--PTETHYACMVY 108 (118)
Q Consensus 84 a~~~~~~m~~~g~~--~~~~t~~~li~ 108 (118)
+.+.+++....... |+....|.+-+
T Consensus 259 a~~~L~kAL~a~p~~~P~~~lan~~~q 285 (301)
T 3u64_A 259 FDEALDRALAIDPESVPHNKLLVILSQ 285 (301)
T ss_dssp HHHHHHHHHHCCGGGCSSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCChhHHHHHHH
Confidence 99999999888777 77766665543
No 212
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.54 E-value=0.068 Score=36.37 Aligned_cols=68 Identities=15% Similarity=0.202 Sum_probs=54.8
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CC-CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----cCCCccHHHHHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VK-DSASWITLILGYGMLGELDVAINLFEAMRE-----DGVEYYPVSHIGV 71 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~-----~~~~p~~~~~~~l 71 (118)
.++..+...|+.++|........ .| +-..|..+|.++...|+..+|++.|++.++ -|+.|+..+-...
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~ 251 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 35667778899999988777664 33 777999999999999999999999999854 4999987664443
No 213
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=95.47 E-value=0.19 Score=29.80 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=60.9
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC---CHhhHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK---DSASWITLILGYGMLG--ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~---~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
+.+|.-|...|+.++|.+.++++..| ...++..+..++-+.+ ..+.+..++..+...|+-+.......+-+.+..
T Consensus 13 ~~lL~EY~~~~D~~EA~~cl~EL~~p~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~vl~~ 92 (152)
T 2ion_A 13 DMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNE 92 (152)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCCcchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHh
Confidence 56889999999999999999999866 3445666666776643 367888999999888876655554443333333
Q ss_pred CC----ChhhHHHHHHHH
Q 046694 78 GG----LVEKGKKFFDEM 91 (118)
Q Consensus 78 ~~----~~~~a~~~~~~m 91 (118)
.. ++..|..++.++
T Consensus 93 ldDl~lDiP~A~~~la~~ 110 (152)
T 2ion_A 93 IPDINLDVPHSYSVLERF 110 (152)
T ss_dssp HHHHHHHSTTHHHHHHHH
T ss_pred ChHhccCccchHHHHHHH
Confidence 22 344566655555
No 214
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.19 E-value=0.3 Score=34.21 Aligned_cols=105 Identities=15% Similarity=0.182 Sum_probs=64.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCCCC--HhhHH--HHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPVKD--SASWI--TLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~~~--~~~~~--~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
..+...-+.+.++.|+.+|++...|+ ...|. +.+... ..++++.|..+|+...+.- +-+...+...++-..+.|
T Consensus 291 ~y~~~~~r~~~~~~AR~i~~~A~~~~~~~~v~i~~A~lE~~-~~~d~~~ar~ife~al~~~-~~~~~~~~~yid~e~~~~ 368 (493)
T 2uy1_A 291 NHLNYVLKKRGLELFRKLFIELGNEGVGPHVFIYCAFIEYY-ATGSRATPYNIFSSGLLKH-PDSTLLKEEFFLFLLRIG 368 (493)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-HHCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHhhCCCCChHHHHHHHHHHHH-HCCChHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcC
Confidence 34445556778999999998774343 22332 222211 2246899999999887642 112334555666667788
Q ss_pred ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 80 LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
+.+.|..+|+... .....|...++.=.+.|+
T Consensus 369 ~~~~aR~l~er~~-----k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 369 DEENARALFKRLE-----KTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp CHHHHHHHHHHSC-----CBHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCC
Confidence 9999988888862 145556666655555454
No 215
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.11 E-value=0.18 Score=27.37 Aligned_cols=62 Identities=8% Similarity=-0.198 Sum_probs=43.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 33 WITLILGYGMLGELDVAINLFEAMRED------GVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~------~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
+-.+-..+.+.++++.|...|++..+. .-.+....+..+-.++.+.|+++.|..++++..+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 445566667778888888888776542 11235667777888888888888888888887663
No 216
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=95.03 E-value=0.24 Score=28.47 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=59.2
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC---CHhhHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK---DSASWITLILGYGMLG--ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~---~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
+.+|.-|...|+.++|.+.++++..| ...+...+..++-+.+ ..+.+..++..+...|+-+.......+-+.+..
T Consensus 11 ~~ll~EY~~~~D~~Ea~~cl~eL~~p~f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~~~Gf~~v~~~ 90 (129)
T 2nsz_A 11 DMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNE 90 (129)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHhh
Confidence 56888999999999999999999866 3345566666666654 357888899999888776655543333333332
Q ss_pred CC----ChhhHHHHHHHH
Q 046694 78 GG----LVEKGKKFFDEM 91 (118)
Q Consensus 78 ~~----~~~~a~~~~~~m 91 (118)
.. +...|..++.++
T Consensus 91 l~Dl~lDiP~a~~~l~~~ 108 (129)
T 2nsz_A 91 IPDINLDVPHSYSVLERF 108 (129)
T ss_dssp HHHHHHHSTTHHHHHHHH
T ss_pred ChHhhcCccchHHHHHHH
Confidence 22 334455555554
No 217
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=94.70 E-value=0.39 Score=32.12 Aligned_cols=91 Identities=8% Similarity=-0.076 Sum_probs=62.1
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCCC---HhhHHHHHHHHHhc-CCHHHHHHHHHHHHHcCCCccHHH---HHHHHHHH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVKD---SASWITLILGYGML-GELDVAINLFEAMREDGVEYYPVS---HIGVLTAC 75 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~~---~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~~~~p~~~~---~~~ll~~~ 75 (118)
+.++.-|...|+.++|.+.++++..|. ..+...+..+.-+. ...+.+.+++..+.+.|+-+.... |..++..+
T Consensus 15 ~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~~~~~Gf~~~~~~l 94 (339)
T 1ug3_A 15 KAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTAQYYQGLYEILELA 94 (339)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCcccHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhhC
Confidence 568899999999999999999998773 33444444444332 246788888999988776654444 44444444
Q ss_pred hcCC-ChhhHHHHHHHHhh
Q 046694 76 SLGG-LVEKGKKFFDEMQA 93 (118)
Q Consensus 76 ~~~~-~~~~a~~~~~~m~~ 93 (118)
-... ++..|...+.++..
T Consensus 95 ~Dl~lDiP~a~~~La~~v~ 113 (339)
T 1ug3_A 95 EDMEIDIPHVWLYLAELVT 113 (339)
T ss_dssp HHHTTTCTTHHHHHHHHHG
T ss_pred hHhhcCccchHHHHHHHHH
Confidence 4444 67778888888733
No 218
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.51 E-value=0.21 Score=26.73 Aligned_cols=65 Identities=9% Similarity=-0.080 Sum_probs=41.1
Q ss_pred CHhhHHHHHHHHHhcCC---HHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 29 DSASWITLILGYGMLGE---LDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
|...+..+-.++...++ .++|..+|++..+. .| +......+-..+.+.|++++|...|+++.+..
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 44445555555543433 67778888777664 34 45555556666777788888888888876643
No 219
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=94.42 E-value=0.31 Score=26.99 Aligned_cols=60 Identities=13% Similarity=0.057 Sum_probs=35.2
Q ss_pred HHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHH
Q 046694 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHI 69 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~ 69 (118)
..+...|++++|..+.+.+..||+..|-++-. .+.|..+++..-+.++..+| .|....|.
T Consensus 47 sSLmNrG~Yq~Al~l~~~~c~pdlepw~ALce--~rlGl~s~le~rL~~la~sg-~p~~q~Fa 106 (115)
T 2uwj_G 47 SSLANQGRYQEALAFAHGNPWPALEPWFALCE--WHLGLGAALDRRLAGLGGSS-DPALADFA 106 (115)
T ss_dssp HHHHHTTCHHHHHGGGTTCCCGGGHHHHHHHH--HHTTCHHHHHHHHHHHHTCS-SHHHHHHH
T ss_pred HHHHcchhHHHHHHhcCCCCCchHHHHHHHHH--HhcccHHHHHHHHHHHHhCC-CHHHHHHH
Confidence 44556666666666666666666666655543 35666666666666665554 33333333
No 220
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.41 E-value=0.69 Score=31.85 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=63.7
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCC------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCccHHHHH--HH
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLP------VKDSASWITLILGYGMLGELDVAINLFEAMRE---DGVEYYPVSHI--GV 71 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~---~~~~p~~~~~~--~l 71 (118)
..+...|.+.|+++.|.+.|.++. ..-+..+-..|+.+...+++..+....++... .+-.|+...-- .-
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~ 214 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYY 214 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHH
Confidence 356778899999999999999886 22455778888999999999999999999854 23233322111 11
Q ss_pred HHHHhcCCChhhHHHHHHHHhh
Q 046694 72 LTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 72 l~~~~~~~~~~~a~~~~~~m~~ 93 (118)
.-.+...+++..|.+.|-+...
T Consensus 215 gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 215 GIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhChHHHHHHHHHHHhc
Confidence 1223466888888888877643
No 221
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=94.24 E-value=0.35 Score=26.84 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=28.2
Q ss_pred HHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC
Q 046694 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDG 60 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~ 60 (118)
..+...|++++|..+.+.+..||+..|-++-. .+.|..+++..-+.++..+|
T Consensus 48 sSLmNrG~Yq~Al~l~~~~c~pdlepw~ALce--~rlGl~s~le~rL~~la~sg 99 (116)
T 2p58_C 48 SSLMNRGDYASALQQGNKLAYPDLEPWLALCE--YRLGLGSALESRLNRLARSQ 99 (116)
T ss_dssp HHHHHTTCHHHHHHHHTTSCCGGGHHHHHHHH--HHHTCHHHHHHHHHHHTTCC
T ss_pred HHHHcchhHHHHHHhcCCCCCchHHHHHHHHH--HhcccHHHHHHHHHHHHhCC
Confidence 34445566666666666555566555555433 34555555555555554444
No 222
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=94.22 E-value=0.053 Score=32.45 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=52.3
Q ss_pred HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC-----------CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 15 IDLANKIFDRLP---VKDSASWITLILGYGMLG-----------ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 15 ~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~-----------~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
+++|+..|++-. ..+...|..+-.+|...| ++++|.+.|++..+. .|+-..|...+...
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~~~----- 134 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLEMT----- 134 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHH-----
Confidence 569999998764 347778999999998774 899999999998874 68877776666653
Q ss_pred hhhHHHHHHHHhh
Q 046694 81 VEKGKKFFDEMQA 93 (118)
Q Consensus 81 ~~~a~~~~~~m~~ 93 (118)
+++.+++-++..
T Consensus 135 -~ka~el~~~~~~ 146 (158)
T 1zu2_A 135 -AKAPQLHAEAYK 146 (158)
T ss_dssp -HTHHHHHHHHHH
T ss_pred -HhCHhccCcccc
Confidence 344555544433
No 223
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=93.87 E-value=0.86 Score=30.02 Aligned_cols=101 Identities=3% Similarity=0.031 Sum_probs=66.0
Q ss_pred CCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHH--HHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC------h
Q 046694 13 GRIDLANKIFDRLP---VKDSASWITLILGYGMLGELD--VAINLFEAMREDGVEYYPVSHIGVLTACSLGGL------V 81 (118)
Q Consensus 13 ~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~--~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~------~ 81 (118)
++++++..+++++. ..|...|+----...+.|.++ ++++.++++.+.... |...|+----.+.+.+. +
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~~ll~~l~~~~~~~~~ 202 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRFFLLFSKKHLATDNTI 202 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHSSGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccccchhhhH
Confidence 67788888887775 446677776666667777777 888888888765322 55555554444555554 6
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
+++.+.++++..... -|...|+-+-..+.+.|+
T Consensus 203 ~eEl~~~~~aI~~~p-~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 203 DEELNYVKDKIVKCP-QNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCC-CCccHHHHHHHHHHhcCC
Confidence 777777777766443 366777666666665554
No 224
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=93.86 E-value=0.61 Score=33.34 Aligned_cols=106 Identities=7% Similarity=-0.023 Sum_probs=63.1
Q ss_pred HHHhcC--CHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC---
Q 046694 8 FYTRTG--RIDLANKIFDRLP---VKDSASWITLILGYGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG--- 78 (118)
Q Consensus 8 ~~~~~~--~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~--- 78 (118)
++.+.+ +++++..+++++. ..|...|+-.--...+.| .++++++.++++.+... -|...|+-.-..+.+.
T Consensus 116 ~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p-~n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 116 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF-SNYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp HHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC-CCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC-CCccHHHHHHHHHHhhccc
Confidence 344455 5677777777664 446667776666666667 67777777777765432 2555555554444442
Q ss_pred -----------CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccc
Q 046694 79 -----------GLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 79 -----------~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~ 115 (118)
+.++++.+.+++..... +-|...|+-+--.+.+.++
T Consensus 195 ~~~~~~~~~~~~~~~eel~~~~~ai~~~-P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 195 PDSGPQGRLPENVLLKELELVQNAFFTD-PNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp CCSSSCCSSCHHHHHHHHHHHHHHHHHC-SSCSHHHHHHHHHHSCCCC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhhC-CCCccHHHHHHHHHhcCCC
Confidence 44566777776665533 2256666666555555443
No 225
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=93.74 E-value=1.3 Score=31.66 Aligned_cols=96 Identities=11% Similarity=0.042 Sum_probs=76.2
Q ss_pred HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHH
Q 046694 15 IDLANKIFDRLP---VKDSASWITLILGYGMLG--ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFF 88 (118)
Q Consensus 15 ~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~ 88 (118)
++++..+++++. ..+..+|+.---.+.+.+ +++++++.++++.+...+ +...|+----++.+.| ..+++.+.+
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~ 167 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFT 167 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHH
Confidence 889999998775 457788888888888888 789999999999876432 6777777777777888 889999999
Q ss_pred HHHhhcCCCccHHHHHHHHHHHHH
Q 046694 89 DEMQARNVKPTETHYACMVYLLIK 112 (118)
Q Consensus 89 ~~m~~~g~~~~~~t~~~li~~~~~ 112 (118)
+++.+.... |...|+..-..+.+
T Consensus 168 ~~~I~~~p~-n~saW~~r~~ll~~ 190 (567)
T 1dce_A 168 DSLITRNFS-NYSSWHYRSCLLPQ 190 (567)
T ss_dssp HTTTTTTCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-CccHHHHHHHHHHh
Confidence 999776543 67888877776665
No 226
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.69 E-value=0.42 Score=25.82 Aligned_cols=60 Identities=12% Similarity=-0.038 Sum_probs=48.0
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC----------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP----------VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~----------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~ 65 (118)
.|-..+.+.|+++.|..-|++.. .+....+..+-.++.+.|+++.|...+++..+. .|+-
T Consensus 10 ~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--~P~~ 79 (104)
T 2v5f_A 10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--DPEH 79 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--CCCC
Confidence 46677889999999998887543 124667889999999999999999999999764 4543
No 227
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=93.51 E-value=0.66 Score=27.51 Aligned_cols=83 Identities=12% Similarity=0.040 Sum_probs=56.7
Q ss_pred HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC---CHHHHHHHHHHHHHcCCCc---cHHHHHHHHHHHhcCCChhhHH
Q 046694 15 IDLANKIFDRLP---VKDSASWITLILGYGMLG---ELDVAINLFEAMREDGVEY---YPVSHIGVLTACSLGGLVEKGK 85 (118)
Q Consensus 15 ~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~---~~~~a~~~~~~m~~~~~~p---~~~~~~~ll~~~~~~~~~~~a~ 85 (118)
+..+++-|++-. .++..+.-.+--++++++ +.+++..+|++..+.. .| ....|+.-+ ++.+.|++++|.
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv-~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAV-GNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHH-HHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHH-HHHHccCHHHHH
Confidence 445555555431 345666666666778887 6779999999998764 24 223444444 459999999999
Q ss_pred HHHHHHhhcCCCccHH
Q 046694 86 KFFDEMQARNVKPTET 101 (118)
Q Consensus 86 ~~~~~m~~~g~~~~~~ 101 (118)
++++.+.+ ++|+..
T Consensus 92 ~y~~~lL~--ieP~n~ 105 (152)
T 1pc2_A 92 KYVRGLLQ--TEPQNN 105 (152)
T ss_dssp HHHHHHHH--HCTTCH
T ss_pred HHHHHHHh--cCCCCH
Confidence 99999988 456433
No 228
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=93.35 E-value=0.86 Score=30.86 Aligned_cols=75 Identities=13% Similarity=0.188 Sum_probs=45.9
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC---CHhhHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK---DSASWITLILGYGMLG--ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~---~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
+.+|.-|...|+.++|.+.++++..| ...+...+..+.-+.+ ..+.+.+++.++...|+-+.......+.+.+..
T Consensus 221 ~~lL~EY~~s~D~~EA~~ci~EL~~p~fhhe~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~~Gf~~vl~~ 300 (358)
T 3eiq_C 221 DMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNE 300 (358)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHccCCcchHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHh
Confidence 45677777777777777777777755 2334445555555443 245677777777777666555554444444443
No 229
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=93.08 E-value=1.1 Score=29.70 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=58.4
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC---CHhhHHHHHHHHHhcCC--HHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK---DSASWITLILGYGMLGE--LDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~---~~~~~~~li~~~~~~~~--~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
+.+|.-|...|+.++|.+.++++..| ...++..+..+.-+.++ .+.+.+++.++.+.|+-+.......+-+.+..
T Consensus 170 ~~lL~EY~~~~D~~EA~~ci~EL~~p~f~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~Gf~~vl~~ 249 (307)
T 2zu6_B 170 DMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGYERIYNE 249 (307)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHcCCCcchHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHh
Confidence 46788888889999999999998866 33455566666666543 57788888888877776655554444444433
Q ss_pred CC----ChhhHHHHHHHH
Q 046694 78 GG----LVEKGKKFFDEM 91 (118)
Q Consensus 78 ~~----~~~~a~~~~~~m 91 (118)
.. ++..|..++.++
T Consensus 250 l~Dl~lDiP~A~~~la~~ 267 (307)
T 2zu6_B 250 IPDINLDVPHSYSVLERF 267 (307)
T ss_dssp HHHHHHHCTTHHHHHHHH
T ss_pred ccHhhcccccHHHHHHHH
Confidence 33 233455555554
No 230
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.07 E-value=0.53 Score=32.07 Aligned_cols=64 Identities=11% Similarity=-0.079 Sum_probs=49.9
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIG 70 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ 70 (118)
+-..+...|++++|...+++.. .|+...|..+-..+.-.|++++|.+.|++.... .|...+|..
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL--~P~~~t~~~ 348 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNL--RPGANTLYW 348 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCSHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CCCcChHHH
Confidence 3334455799999999999775 577777777778888899999999999998765 566666544
No 231
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=92.76 E-value=0.78 Score=26.29 Aligned_cols=70 Identities=7% Similarity=0.038 Sum_probs=49.5
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHHhhcCCCccHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m~~~g~~~~~~t 102 (118)
..+.++.-|...|+.++|.+.++++..-.. -...+..++..++-+.+. .+...+++..+.+.|+.+....
T Consensus 9 ki~~ll~EY~~~~D~~Ea~~cl~eL~~p~f-~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~ 80 (129)
T 2nsz_A 9 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 80 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCCcc-HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHH
Confidence 456789999999999999999999863211 234556666667666542 4667888888877776554443
No 232
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=92.21 E-value=0.64 Score=24.04 Aligned_cols=63 Identities=5% Similarity=0.002 Sum_probs=47.6
Q ss_pred HHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 54 EAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 54 ~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
+.|++.|++++..- ..+++.+...+ ..-.+.++++.+.+.+...+..|.--.++.+.+.|-+.
T Consensus 6 ~~l~~~g~~~t~~r-~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~ 69 (83)
T 2fu4_A 6 TALKKAGLKVTLPR-LKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVT 69 (83)
T ss_dssp HHHHHTTCCCCHHH-HHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHcCCCcCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeE
Confidence 45677888877655 45667777665 56678899999988877778888888888888888653
No 233
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=92.11 E-value=1.1 Score=26.48 Aligned_cols=70 Identities=7% Similarity=0.038 Sum_probs=49.1
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHHhhcCCCccHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m~~~g~~~~~~t 102 (118)
..+.++.-|...|+.++|.+.++++..-.. -...+..++..++-+.++ .+.+.+++..+.+.|+.+....
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p~f-~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~ 82 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 82 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHH
Confidence 456789999999999999999999863211 234556666667666432 4567788888877776554443
No 234
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=92.09 E-value=0.79 Score=30.29 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=55.6
Q ss_pred chHHHHHHHhc-----CCHHHHHHHhhhCC--CC--CHhhHHHHHHHHHhc-CCHHHHHHHHHHHHHcCCC--ccHHHHH
Q 046694 2 IEPRLDFYTRT-----GRIDLANKIFDRLP--VK--DSASWITLILGYGML-GELDVAINLFEAMREDGVE--YYPVSHI 69 (118)
Q Consensus 2 ~~~ll~~~~~~-----~~~~~a~~~~~~m~--~~--~~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~~~~--p~~~~~~ 69 (118)
|..|...|.+. |+.++|++.|++-. .| ++.++...-..++.. |+.+++.+.+++..+.... |+....+
T Consensus 202 ~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan 281 (301)
T 3u64_A 202 WNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLV 281 (301)
T ss_dssp HHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHH
T ss_pred HHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHH
Confidence 56777788884 99999999999775 45 477888888888885 9999999999999988766 6654444
Q ss_pred HH
Q 046694 70 GV 71 (118)
Q Consensus 70 ~l 71 (118)
..
T Consensus 282 ~~ 283 (301)
T 3u64_A 282 IL 283 (301)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 235
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.87 E-value=1.3 Score=26.91 Aligned_cols=50 Identities=24% Similarity=0.331 Sum_probs=40.9
Q ss_pred HHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 7 DFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
..-...|+++.|.++.+++ .+...|..+-......|+++-|.++|.+..+
T Consensus 13 ~LAL~lg~l~~A~e~a~~l--~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL--NDSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH--CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHhcCCHHHHHHHHHHh--CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 3446789999999998876 4667899999999999999999999988753
No 236
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.79 E-value=0.82 Score=24.36 Aligned_cols=56 Identities=7% Similarity=0.001 Sum_probs=43.7
Q ss_pred HHHHHHhcCC---HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC
Q 046694 5 RLDFYTRTGR---IDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDG 60 (118)
Q Consensus 5 ll~~~~~~~~---~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~ 60 (118)
+-.++...++ .++|..+|++.. ..++.....+-..+.+.|++++|...|+++.+..
T Consensus 12 ~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 12 KATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 3344443443 789999998775 4477788888899999999999999999998763
No 237
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.25 E-value=1.6 Score=26.58 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=20.7
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLP 26 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~ 26 (118)
|..|-....+.|+++-|++.|.+..
T Consensus 37 Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 37 WERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHhC
Confidence 6777888888888888888888776
No 238
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=91.07 E-value=2.2 Score=28.02 Aligned_cols=43 Identities=16% Similarity=0.044 Sum_probs=18.6
Q ss_pred HHHHHHhhhCC---CCCHhhHHHHHHHHHhcC--CHHHHHHHHHHHHH
Q 046694 16 DLANKIFDRLP---VKDSASWITLILGYGMLG--ELDVAINLFEAMRE 58 (118)
Q Consensus 16 ~~a~~~~~~m~---~~~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~ 58 (118)
++|..+++++. ..+...|+.--..+...+ +++++++.++.+..
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~ 97 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIAL 97 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 34444444432 123334444444444444 44444444444443
No 239
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=90.67 E-value=2.7 Score=28.31 Aligned_cols=99 Identities=7% Similarity=-0.054 Sum_probs=48.6
Q ss_pred CHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHH--------HHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--
Q 046694 14 RIDLANKIFDRLPV---KDSASWITLILGYGMLGELD--------VAINLFEAMREDGVEYYPVSHIGVLTACSLGGL-- 80 (118)
Q Consensus 14 ~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~--------~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~-- 80 (118)
+.+++..+++++.. .|...|+--.-...+.|.++ ++++.++++.+... -|...|+-.-..+.+.+.
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp-~N~SAW~~R~~lL~~l~~~~ 218 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDG-RNNSAWGWRWYLRVSRPGAE 218 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHTTSTTCC
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhccccc
Confidence 45566666655542 24444443333333333333 66666666655422 255555555555555544
Q ss_pred -----hhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 81 -----VEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 81 -----~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
++++.+.+++..... +-|...|+-+-..+.+.|
T Consensus 219 ~~~~~~~eELe~~~~aI~~~-P~n~SaW~Ylr~Ll~~~~ 256 (349)
T 3q7a_A 219 TSSRSLQDELIYILKSIHLI-PHNVSAWNYLRGFLKHFS 256 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhcC
Confidence 455556665555432 225566665555554444
No 240
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=90.51 E-value=1.7 Score=25.73 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=48.1
Q ss_pred HHHHHHhcCCHHHHHHHhhhC-C--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC
Q 046694 5 RLDFYTRTGRIDLANKIFDRL-P--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVE 62 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m-~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~ 62 (118)
-|......|+-|+..++..++ . .+++...-.+-.+|.+.|+..++.+++.+.=+.|++
T Consensus 97 ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 97 ALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhH
Confidence 466777788888888998884 3 557777788889999999999999999999888865
No 241
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.49 E-value=2.4 Score=29.64 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=58.7
Q ss_pred CCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHH
Q 046694 13 GRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFD 89 (118)
Q Consensus 13 ~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~ 89 (118)
++.+.|..+|+... ..+...|...++-..+.|+.+.|..+|++.. -....|...++-=...|+.+.+.++++
T Consensus 334 ~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~~-----k~~~lw~~~~~fE~~~G~~~~~r~v~~ 408 (493)
T 2uy1_A 334 GSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRLE-----KTSRMWDSMIEYEFMVGSMELFRELVD 408 (493)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHSC-----CBHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 36999999998653 1234456667777788899999999999972 257778888887778899999999888
Q ss_pred HHh
Q 046694 90 EMQ 92 (118)
Q Consensus 90 ~m~ 92 (118)
+..
T Consensus 409 ~~~ 411 (493)
T 2uy1_A 409 QKM 411 (493)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 242
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.34 E-value=6.4 Score=30.63 Aligned_cols=109 Identities=11% Similarity=0.007 Sum_probs=79.2
Q ss_pred HHHHhcCCHHHHHHHhhhCCCC--------------------------CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC
Q 046694 7 DFYTRTGRIDLANKIFDRLPVK--------------------------DSASWITLILGYGMLGELDVAINLFEAMREDG 60 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~~~--------------------------~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~ 60 (118)
.+|..+|++++|..+|++-... -..-|..++..+-+.+.++.+.++-..-.+..
T Consensus 850 ~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~ 929 (1139)
T 4fhn_B 850 LIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASK 929 (1139)
T ss_dssp HHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHC
T ss_pred HHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 4566899999999999876310 11236778889999999998888877665432
Q ss_pred -CC-cc--HHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 61 -VE-YY--PVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 61 -~~-p~--~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
-. ++ ...|..+++.+.+.|++++|...+-.+.+...+ ......||...|+.|+++
T Consensus 930 ~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r--~~cLr~LV~~lce~~~~~ 988 (1139)
T 4fhn_B 930 ETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLK--KSCLLDFVNQLTKQGKIN 988 (1139)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSC--HHHHHHHHHHHHHHCCHH
T ss_pred cCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHhCCChh
Confidence 12 22 236889999999999999999999888665443 456667777777777653
No 243
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=88.92 E-value=1.9 Score=23.94 Aligned_cols=47 Identities=11% Similarity=0.088 Sum_probs=37.1
Q ss_pred CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 046694 27 VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTA 74 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 74 (118)
.|++....+.+++|-+.+++..|.++|+-.+.. +.+...+|..+++-
T Consensus 42 VP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K-~~~~~~iY~~~lqE 88 (109)
T 1v54_E 42 VPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQE 88 (109)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hcCchhhHHHHHHH
Confidence 688999999999999999999999999998754 23334456665543
No 244
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=88.48 E-value=4.2 Score=27.39 Aligned_cols=105 Identities=8% Similarity=0.024 Sum_probs=75.2
Q ss_pred HHHhcCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC-C-Ch
Q 046694 8 FYTRTGRIDLANKIFDRLP---VKDSASWITLILGYGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLG-G-LV 81 (118)
Q Consensus 8 ~~~~~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~-~-~~ 81 (118)
...+.+.-++|.++++++. ..+...|+.-=..+...| .+++++++++.+....- -+...|+----.+.+. + ++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nP-Kny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNL-KSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHhcCCCh
Confidence 3344556678999998875 347777887777777788 59999999999987642 2667777766666655 6 88
Q ss_pred hhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 82 EKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
+++.++++++.+.. +-|...|+.---++.+.|
T Consensus 142 ~~EL~~~~k~L~~d-pkNy~AW~~R~wvl~~l~ 173 (349)
T 3q7a_A 142 VSEIEYIHGSLLPD-PKNYHTWAYLHWLYSHFS 173 (349)
T ss_dssp HHHHHHHHHHTSSC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhc
Confidence 99999999998754 336777775544444444
No 245
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=88.40 E-value=2.7 Score=25.10 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=63.6
Q ss_pred HHHHHHHhcCCH------HHHHHHhhhCC---CC----CHhhHHHHHHHH---HhcCCHHHHHHHHHHHHHcCCCccHHH
Q 046694 4 PRLDFYTRTGRI------DLANKIFDRLP---VK----DSASWITLILGY---GMLGELDVAINLFEAMREDGVEYYPVS 67 (118)
Q Consensus 4 ~ll~~~~~~~~~------~~a~~~~~~m~---~~----~~~~~~~li~~~---~~~~~~~~a~~~~~~m~~~~~~p~~~~ 67 (118)
..+...-+.|+. ++.+++|++-. .| ....|--+.--| ...+++++|.++|+.+++..-+. ...
T Consensus 18 ~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~hKkF-AKi 96 (161)
T 4h7y_A 18 SLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARANCKKF-AFV 96 (161)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHCTTB-HHH
T ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH-HHH
Confidence 345555566887 88888887543 22 111222222111 22378999999999997764445 566
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHH
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~ 101 (118)
|...-.-=.+.|++..|.+++.+-...+..|...
T Consensus 97 wi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 97 HISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 6666666668999999999999998888765543
No 246
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=87.83 E-value=2.4 Score=24.61 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=36.8
Q ss_pred HHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 54 EAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 54 ~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+.+++.|++++..= ..+++.+...+ .-.|.++++.+.+.+...+..|.---++.+.+.|-+
T Consensus 8 ~~L~~~g~r~T~qR-~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 68 (145)
T 3eyy_A 8 SDLRQRGYRLTPQR-QLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLV 68 (145)
T ss_dssp HHHHTTTCCCCHHH-HHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHcCCCcCHHH-HHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcE
Confidence 34556677765432 22233333444 557788888887777666766666666777666644
No 247
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=86.35 E-value=4.7 Score=27.30 Aligned_cols=79 Identities=6% Similarity=0.019 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
...+.++.-|...++.++|.++++++..-.+. ...+..++..++-+.++ .+...+++..+.+.|+.+.......+.+
T Consensus 218 kki~~lL~EY~~s~D~~EA~~ci~EL~~p~fh-he~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~~Gf~~ 296 (358)
T 3eiq_C 218 KEIDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYER 296 (358)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHCCTTCH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHccCCcch-HHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 35688999999999999999999999743222 34556666666666543 4567888888888777655554444444
Q ss_pred HH
Q 046694 109 LL 110 (118)
Q Consensus 109 ~~ 110 (118)
.+
T Consensus 297 vl 298 (358)
T 3eiq_C 297 IY 298 (358)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 248
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=85.93 E-value=6.2 Score=26.71 Aligned_cols=77 Identities=13% Similarity=0.109 Sum_probs=53.6
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCCC----HhhHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVKD----SASWITLILGYGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~~----~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
.++|.-|...|++++|...++++..|+ ...+..+..++-+.. ..+.+-.++..+...|+-+.......+...+..
T Consensus 16 ~~ii~EY~~~~D~~Ea~~~l~eL~~p~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~~ls~~~~~~Gf~~lle~ 95 (364)
T 3l6a_A 16 ETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGIATSDNFMQAFLNVLDQ 95 (364)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCchhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhh
Confidence 578999999999999999999998774 335555555554432 257778888888887776555555555554444
Q ss_pred CC
Q 046694 78 GG 79 (118)
Q Consensus 78 ~~ 79 (118)
..
T Consensus 96 l~ 97 (364)
T 3l6a_A 96 CP 97 (364)
T ss_dssp HH
T ss_pred Ch
Confidence 43
No 249
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=85.71 E-value=0.061 Score=38.39 Aligned_cols=78 Identities=10% Similarity=0.129 Sum_probs=52.1
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
|+.|-.+..+.+++.+|++.|= +..|...|..+|.+..+.|.+++.++.+...++..-+| ..=+.++-+|++.+++
T Consensus 57 Ws~LgkAqL~~~~v~eAIdsyI--kA~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~ke~--~IDteLi~ayAk~~rL 132 (624)
T 3lvg_A 57 WSQLAKAQLQKGMVKEAIDSYI--KADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES--YVETELIFALAKTNRL 132 (624)
T ss_dssp SSSHHHHTTTSSSCTTTTTSSC--CCSCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTCCST--TTTHHHHHHHHTSCSS
T ss_pred HHHHHHHHHccCchHHHHHHHH--hCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc--ccHHHHHHHHHhhCcH
Confidence 5666666666676666666552 34566778888888888888888888777666543333 3345677777777666
Q ss_pred hh
Q 046694 82 EK 83 (118)
Q Consensus 82 ~~ 83 (118)
.+
T Consensus 133 ~e 134 (624)
T 3lvg_A 133 AE 134 (624)
T ss_dssp ST
T ss_pred HH
Confidence 54
No 250
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=85.46 E-value=2.2 Score=24.77 Aligned_cols=62 Identities=11% Similarity=0.141 Sum_probs=36.1
Q ss_pred HHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 54 EAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 54 ~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+.|++.|++++..=. .+++.+...+..-.|.++++.+.+.+...+..|.---++.+.+.|-+
T Consensus 11 ~~l~~~g~r~T~qR~-~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 11 ETLKETGVRITPQRH-AILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp HHHHHTTCCCCHHHH-HHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHcCCCCCHHHH-HHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCE
Confidence 345566666554322 23334444455566777777776666666666666666666666644
No 251
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=85.29 E-value=3.6 Score=24.56 Aligned_cols=26 Identities=15% Similarity=0.314 Sum_probs=19.2
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK 28 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~ 28 (118)
..+|.-|...++.++|...++++..|
T Consensus 14 ~~ii~EYf~~~D~~Ea~~~l~eL~~p 39 (165)
T 2rg8_A 14 TPIIQEYFEHGDTNEVAEMLRDLNLG 39 (165)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCc
Confidence 35677777778888888888777755
No 252
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=85.08 E-value=3.7 Score=23.41 Aligned_cols=61 Identities=5% Similarity=-0.023 Sum_probs=38.0
Q ss_pred HHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 55 AMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 55 ~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.|++.|++++..=. .+++.+...+ ..-.|.++++.+.+.+...+..|.---++.+.+.|-+
T Consensus 8 ~l~~~g~r~T~qR~-~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 69 (136)
T 1mzb_A 8 ELRKAGLKVTLPRV-KILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLV 69 (136)
T ss_dssp HHHHTTCCCCHHHH-HHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSE
T ss_pred HHHHCCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcE
Confidence 35667776654332 3344445555 5667888888887777666777766667777766644
No 253
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=84.90 E-value=6.5 Score=26.00 Aligned_cols=73 Identities=7% Similarity=0.034 Sum_probs=50.4
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHHhhcCCCccHHHHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEMQARNVKPTETHYAC 105 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m~~~g~~~~~~t~~~ 105 (118)
..+.++.-|...|+.++|.+.++++..-... ...+..++..++-+.++ .+...+++..+.+.|+.+.......
T Consensus 168 ki~~lL~EY~~~~D~~EA~~ci~EL~~p~f~-~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~G 242 (307)
T 2zu6_B 168 EIDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRG 242 (307)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCGGGH-HHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCCcch-HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence 4568899999999999999999999632222 34556666667666543 4567788888877776554444333
No 254
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=84.66 E-value=2.3 Score=22.99 Aligned_cols=37 Identities=22% Similarity=0.134 Sum_probs=20.9
Q ss_pred CHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHH
Q 046694 14 RIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAI 50 (118)
Q Consensus 14 ~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~ 50 (118)
..++|.++++.++.++...|..++.++...|...-|.
T Consensus 52 ~~~~ar~Lld~L~~rG~~Af~~F~~aL~et~~~~La~ 88 (97)
T 3ygs_P 52 RRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLAS 88 (97)
T ss_dssp HHHHHHHHHHHHTTSCTTHHHHHHHHHHTTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcChHHHHHHHHHHHHcCcHHHHH
Confidence 4555666666666555556666666665555544443
No 255
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=84.35 E-value=4.5 Score=23.72 Aligned_cols=46 Identities=11% Similarity=0.090 Sum_probs=36.8
Q ss_pred CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHH
Q 046694 27 VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLT 73 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~ 73 (118)
.|+.....+.+++|-+.+++..|.++|+-.+.. ..+...+|-.+++
T Consensus 85 VPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lq 130 (152)
T 2y69_E 85 VPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQ 130 (152)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHH
Confidence 578899999999999999999999999998754 3334555666554
No 256
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=84.07 E-value=9.1 Score=28.65 Aligned_cols=111 Identities=9% Similarity=-0.073 Sum_probs=63.4
Q ss_pred HHHHHHhcCC-HHHHHHHhhhCCC--CCHh--hHHHHHHHHHhcC-CHHHHHHHHHHHHH------cCCCccH-------
Q 046694 5 RLDFYTRTGR-IDLANKIFDRLPV--KDSA--SWITLILGYGMLG-ELDVAINLFEAMRE------DGVEYYP------- 65 (118)
Q Consensus 5 ll~~~~~~~~-~~~a~~~~~~m~~--~~~~--~~~~li~~~~~~~-~~~~a~~~~~~m~~------~~~~p~~------- 65 (118)
|+..+...++ ++.|..+|+++.. |... ....+|..+.+.+ +=-+|.++..+..+ ...++..
T Consensus 254 Ll~~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~ 333 (754)
T 4gns_B 254 LKSFIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLM 333 (754)
T ss_dssp HHHHHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHH
T ss_pred HHHHHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccccccc
Confidence 4445555666 5889999988763 3222 2233344333333 22233333333321 1122111
Q ss_pred ----HHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCc-cHHHHHHHHHHHHHccccc
Q 046694 66 ----VSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP-TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 66 ----~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~-~~~t~~~li~~~~~~g~~~ 117 (118)
.....-.+-|...|+++.|.++-++-.. +.| +..||-.|..+|.+.|+++
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~--~aPseF~tW~~La~vYi~l~d~e 388 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTE--LALDSFESWYNLARCHIKKEEYE 388 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTTCHH
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHh--cCchhhHHHHHHHHHHHHhccHH
Confidence 1222224445578999999999888755 345 5899999999999999876
No 257
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=84.07 E-value=4.5 Score=23.55 Aligned_cols=62 Identities=5% Similarity=-0.004 Sum_probs=40.2
Q ss_pred HHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 54 EAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 54 ~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+.|++.|++++..=. .+++.+...+ ..-.|.++++.+.+.+...+..|.---++.+.+.|-+
T Consensus 6 ~~l~~~g~r~T~qR~-~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 68 (150)
T 2w57_A 6 QALKDAGLKVTLPRL-KILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIV 68 (150)
T ss_dssp HHHHHTTCCCCHHHH-HHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHcCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcE
Confidence 346667777654332 3344555555 5667888888887777677777776777777777654
No 258
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=83.87 E-value=4.9 Score=23.79 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=46.6
Q ss_pred HHHHHHHHHH-HHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhc--CCCccHHHHHHHHHHHHHcccc
Q 046694 46 LDVAINLFEA-MREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR--NVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 46 ~~~a~~~~~~-m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~--g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.+.+++-+.+ +++.|++++.. =..+++.+...+..-.|.++++.+.+. +...+..|.---++.+.+.|-+
T Consensus 13 ~~~~~~~~~~~L~~~g~r~T~q-R~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv 85 (162)
T 4ets_A 13 YDVLLERFKKILRQGGLKYTKQ-REVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMV 85 (162)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHH-HHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHHcCCCCCHH-HHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3444544444 45678877543 244566667777777888888888777 6666777766667777777754
No 259
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.84 E-value=3.3 Score=28.47 Aligned_cols=61 Identities=13% Similarity=0.041 Sum_probs=51.6
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCccHHHHHHHHHHHhcCCChhhHHHHHHHHh
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMRED--GVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~--~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
+...+-.-|.+.|+.++|.++|.+++.. +..--...+...++.+...+++..+.....+..
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~ 195 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVN 195 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 5667888899999999999999999865 333456788889999999999999999998873
No 260
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=83.32 E-value=3.2 Score=23.90 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=21.0
Q ss_pred HHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 72 LTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 72 l~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
++.+...+..-.|.++++.+.+.+...+..|.---++.+.+.|
T Consensus 20 l~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~G 62 (139)
T 3mwm_A 20 SAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAG 62 (139)
T ss_dssp HHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCC
Confidence 3444444444455555555555444445444444445554444
No 261
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=83.06 E-value=6.2 Score=26.73 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
..-..+|.-|...|++++|.+.++++..-..--...++..+..++-+.. .-+.+-.++..+...|+.+.......+...
T Consensus 13 k~~~~ii~EY~~~~D~~Ea~~~l~eL~~p~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~~ls~~~~~~Gf~~l 92 (364)
T 3l6a_A 13 KLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGIATSDNFMQAFLNV 92 (364)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhCCchhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 3567899999999999999999999863110001344444444444332 134566777777766665444444443333
No 262
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.49 E-value=3.4 Score=23.37 Aligned_cols=64 Identities=8% Similarity=-0.057 Sum_probs=42.2
Q ss_pred hHHHHHHHHHhcCC---HHHH----HHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 32 SWITLILGYGMLGE---LDVA----INLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 32 ~~~~li~~~~~~~~---~~~a----~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
++..++..|...-. .+++ .-+|+++.+..+.|++..--.-|-.+...++++.|.+++-.+....
T Consensus 21 ~l~~~l~~~~~~~~k~~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~~l~t~~ 91 (118)
T 2yru_A 21 PLEQALEDCHGHTKKQVCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWDAADDIHRSLMVDH 91 (118)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHST
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCc
Confidence 45555555433321 2333 3456666777787777666666777788899999999998885533
No 263
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=82.40 E-value=5.3 Score=23.08 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=48.7
Q ss_pred CHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 14 RIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 14 ~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
..+.+.+.+.+-..+....=..++..+...+.+-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 5 ~~~~~~~~l~~~g~r~T~qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 73 (145)
T 2fe3_A 5 ELKEALETLKETGVRITPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVK 73 (145)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEE
Confidence 345555556554433444455667777777778889999999988877778888877888888877664
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=82.02 E-value=5 Score=26.13 Aligned_cols=68 Identities=12% Similarity=-0.021 Sum_probs=47.7
Q ss_pred HHHHhcCCHHHHHHHhhh-CC-C-CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC--CCccHHHHHHHHHH
Q 046694 7 DFYTRTGRIDLANKIFDR-LP-V-KDSASWITLILGYGMLGELDVAINLFEAMREDG--VEYYPVSHIGVLTA 74 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~-m~-~-~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~--~~p~~~~~~~ll~~ 74 (118)
....+.|++++|+.-... ++ . .|...-..++..+|-.|+|+.|.+-++-..+.. ..|....|..+|++
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~a 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKA 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHH
Confidence 456678888888776653 33 3 388888889999999999999998888876542 22334456555554
No 265
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=82.02 E-value=4.7 Score=23.48 Aligned_cols=62 Identities=10% Similarity=0.120 Sum_probs=36.3
Q ss_pred HHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 54 EAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 54 ~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+.+++.|++++..=- .+++.+...+..-.|.++++.+.+.+...+..|.---++.+.+.|-+
T Consensus 16 ~~l~~~g~r~T~qR~-~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 77 (150)
T 2xig_A 16 MSIKKNGLKNSKQRE-EVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFI 77 (150)
T ss_dssp HHHHHCC--CHHHHH-HHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHcCCCCCHHHH-HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcE
Confidence 345666766543322 33444445555667777777777666666666666666666666644
No 266
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=81.17 E-value=3.7 Score=23.28 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=22.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 36 LILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 36 li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
++..+...+.+-.|.++++.+++.+...+..|.-..|+.+.+.|-+
T Consensus 16 Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 61 (131)
T 2o03_A 16 ISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLV 61 (131)
T ss_dssp HHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCE
Confidence 3444444444555555555555554444444444444554444443
No 267
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=80.76 E-value=6.7 Score=23.16 Aligned_cols=71 Identities=8% Similarity=0.045 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC---ChhhHHHHHHHHhhcCCCc--cHHHHHHHHHHHHHccccc
Q 046694 45 ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG---LVEKGKKFFDEMQARNVKP--TETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 45 ~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~---~~~~a~~~~~~m~~~g~~~--~~~t~~~li~~~~~~g~~~ 117 (118)
....+.+-|.+-.+.|. ++..+-...--++++.+ +++++..++++..+.. .| ....+-.|--+|.+.|+.+
T Consensus 13 ~l~~~~~~y~~e~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~ 88 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYE 88 (152)
T ss_dssp HHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHH
Confidence 35566666776666554 67777777777788888 6779999999997765 34 3444445556667777654
No 268
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=80.65 E-value=8 Score=24.02 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=48.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccH
Q 046694 43 LGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE 100 (118)
Q Consensus 43 ~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~ 100 (118)
.+...++.++|..|...|+-- -..-|-..-..+...|++++|.++|+.=.+.+-+|-.
T Consensus 92 ~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~ 150 (202)
T 3esl_A 92 SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYN 150 (202)
T ss_dssp TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHH
Confidence 455889999999999988765 4667888888889999999999999998888877743
No 269
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=80.61 E-value=2.6 Score=28.15 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCCccHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVKPTET 101 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~~~~~ 101 (118)
....++.-|...|+.++|.+.++++..-... ...+..++..++-+.. .-+.+-+++..+.+.|+.+...
T Consensus 13 ~~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~-~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~~ 82 (339)
T 1ug3_A 13 KSKAIIEEYLHLNDMKEAVQCVQELASPSLL-FIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTAQ 82 (339)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHTTCCGGGH-HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCcccH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 3567899999999999999999998632221 2334444444444322 2345667777776666544433
No 270
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=80.44 E-value=6.1 Score=22.55 Aligned_cols=85 Identities=13% Similarity=-0.012 Sum_probs=52.8
Q ss_pred cCCHHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCCHHH---HHHHHHHHHHcCCCc--cHHHHHHHHHHHhcCCChhh
Q 046694 12 TGRIDLANKIFDRLP---VKDSASWITLILGYGMLGELDV---AINLFEAMREDGVEY--YPVSHIGVLTACSLGGLVEK 83 (118)
Q Consensus 12 ~~~~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~~~~---a~~~~~~m~~~~~~p--~~~~~~~ll~~~~~~~~~~~ 83 (118)
...+..+++-|++-. .++..+--.+--++.++..... ++.++.++.+.+ .| .....--+--++.+.|++++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHH
Confidence 334445555554332 2444444445556777776555 888888887764 23 22223334456789999999
Q ss_pred HHHHHHHHhhcCCCcc
Q 046694 84 GKKFFDEMQARNVKPT 99 (118)
Q Consensus 84 a~~~~~~m~~~g~~~~ 99 (118)
|.+.++.+.+. +|+
T Consensus 93 A~~~~~~lL~~--eP~ 106 (126)
T 1nzn_A 93 ALKYVRGLLQT--EPQ 106 (126)
T ss_dssp HHHHHHHHHHH--CTT
T ss_pred HHHHHHHHHHh--CCC
Confidence 99999999874 454
No 271
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=80.40 E-value=3.1 Score=24.67 Aligned_cols=67 Identities=10% Similarity=0.011 Sum_probs=47.2
Q ss_pred HHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCccHHHHHHHHHHHhcCCChhh
Q 046694 17 LANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMRED--GVEYYPVSHIGVLTACSLGGLVEK 83 (118)
Q Consensus 17 ~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~--~~~p~~~~~~~ll~~~~~~~~~~~ 83 (118)
++.+.+.+-..+....=..++..+...+.+-.|.++++.+++. +...+..|.-.-|+.+.+.|-+.+
T Consensus 19 ~~~~~L~~~g~r~T~qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv~~ 87 (162)
T 4ets_A 19 RFKKILRQGGLKYTKQREVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTS 87 (162)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 3344444333334445566777777888889999999999887 767787777777888888876643
No 272
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=79.90 E-value=5.9 Score=22.00 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=43.3
Q ss_pred CHHHHHHHhhhCC-CCCHhhHHHHH--HHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHH
Q 046694 14 RIDLANKIFDRLP-VKDSASWITLI--LGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDE 90 (118)
Q Consensus 14 ~~~~a~~~~~~m~-~~~~~~~~~li--~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~ 90 (118)
+.++|..+-+-+. .++ .-.-+|| ..+.+.|++++|+.+...+- -||...|-++-. .|.|..+.+..-+.+
T Consensus 22 ~HqEA~tIAdwL~~~~~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s~le~rL~~ 94 (116)
T 2p58_C 22 YHEEANCIAEWLHLKGE-EEAVQLIRLSSLMNRGDYASALQQGNKLA----YPDLEPWLALCE--YRLGLGSALESRLNR 94 (116)
T ss_dssp CHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHTTCHHHHHHHHTTSC----CGGGHHHHHHHH--HHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHHHHHHHHHH
Confidence 3556655555443 223 3333343 44556677777777665543 567777766543 366777777766666
Q ss_pred HhhcC
Q 046694 91 MQARN 95 (118)
Q Consensus 91 m~~~g 95 (118)
+...|
T Consensus 95 la~sg 99 (116)
T 2p58_C 95 LARSQ 99 (116)
T ss_dssp HTTCC
T ss_pred HHhCC
Confidence 65554
No 273
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=79.36 E-value=7.2 Score=22.69 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=45.1
Q ss_pred HHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 17 LANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 17 ~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
.+.+.+.+-..+....=..++..+...+.+-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 13 ~~~~~l~~~g~r~T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 78 (150)
T 2xig_A 13 RLRMSIKKNGLKNSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFIS 78 (150)
T ss_dssp HHHHHHHHCC--CHHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEE
Confidence 344444443334445555677777777778889999999988876777777777777777777654
No 274
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=78.82 E-value=11 Score=24.56 Aligned_cols=72 Identities=11% Similarity=0.035 Sum_probs=54.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC--CCccHHHHHHHHHHH
Q 046694 38 LGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN--VKPTETHYACMVYLL 110 (118)
Q Consensus 38 ~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g--~~~~~~t~~~li~~~ 110 (118)
....+.|.+++++.....-.+.. +-|...=..++.-+|-.|++++|.+=++...+.. ..|...+|..+|++=
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~-P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE 78 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKAS-PKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAA 78 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHH
Confidence 45667899999999988877662 3366666778999999999999998888875543 345555677776654
No 275
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=78.23 E-value=5.5 Score=22.08 Aligned_cols=75 Identities=12% Similarity=-0.037 Sum_probs=45.4
Q ss_pred CHHHHHHHhhhCC-CCCHhhHHHHH--HHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHH
Q 046694 14 RIDLANKIFDRLP-VKDSASWITLI--LGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDE 90 (118)
Q Consensus 14 ~~~~a~~~~~~m~-~~~~~~~~~li--~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~ 90 (118)
+.++|..+-+-+. .++ .-.-+|| ..+.+.|++++|+.+...+- -||...|-++-. .|.|..+.+..-+.+
T Consensus 21 ~HqEA~tIAdwL~~~~~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s~le~rL~~ 93 (115)
T 2uwj_G 21 CHEEALCIAEWLERLGQ-DEAARLIRISSLANQGRYQEALAFAHGNP----WPALEPWFALCE--WHLGLGAALDRRLAG 93 (115)
T ss_dssp CHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHTTCHHHHHGGGTTCC----CGGGHHHHHHHH--HHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHHHHHHHHHH
Confidence 3556666655544 233 3333444 44556677888777665533 577777766643 477777777777777
Q ss_pred HhhcC
Q 046694 91 MQARN 95 (118)
Q Consensus 91 m~~~g 95 (118)
+...|
T Consensus 94 la~sg 98 (115)
T 2uwj_G 94 LGGSS 98 (115)
T ss_dssp HHTCS
T ss_pred HHhCC
Confidence 76655
No 276
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=77.87 E-value=2.7 Score=23.85 Aligned_cols=46 Identities=11% Similarity=-0.012 Sum_probs=30.2
Q ss_pred HHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcccc
Q 046694 71 VLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 71 ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+++.+...+..-.|.++++.+.+.+...+..|.--.++.+.+.|-+
T Consensus 16 Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 61 (131)
T 2o03_A 16 ISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLV 61 (131)
T ss_dssp HHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCE
Confidence 4455555556667777777777766666666666666777666644
No 277
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=77.78 E-value=2.4 Score=24.43 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 34 ITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 34 ~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
..++..+...+.+-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 17 ~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 65 (139)
T 3mwm_A 17 AAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVD 65 (139)
T ss_dssp HHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSE
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEE
Confidence 3456666666677788999999988877777777777777777777553
No 278
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=77.53 E-value=13 Score=24.74 Aligned_cols=88 Identities=5% Similarity=-0.075 Sum_probs=43.8
Q ss_pred HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcCC-HHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcC------------
Q 046694 15 IDLANKIFDRLP---VKDSASWITLILGYGMLGE-LDVAINLFEAMREDGVEYYPVSHIGVLTACSLG------------ 78 (118)
Q Consensus 15 ~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~~-~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~------------ 78 (118)
++++..+++++. ..|-..|+----.....|. ++++++.++++.+... -|...|+-.-..+.+.
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p-~N~SAW~~R~~ll~~l~~~~~~~~~~~~ 204 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF-SNYSSWHYRSCLLPQLHPQPDSGPQGRL 204 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHHSCCC------CC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHhhhcccccccccc
Confidence 566666666554 3355555555555555555 4666666666655432 2444444433333322
Q ss_pred --CChhhHHHHHHHHhhcCCCccHHHHH
Q 046694 79 --GLVEKGKKFFDEMQARNVKPTETHYA 104 (118)
Q Consensus 79 --~~~~~a~~~~~~m~~~g~~~~~~t~~ 104 (118)
+.++++.+.+++..... +-|...|+
T Consensus 205 ~~~~~~eEle~~~~ai~~~-P~d~SaW~ 231 (331)
T 3dss_A 205 PENVLLKELELVQNAFFTD-PNDQSAWF 231 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHS-TTCHHHHH
T ss_pred chHHHHHHHHHHHHHHHhC-CCCHHHHH
Confidence 33455555555554432 22445554
No 279
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=77.32 E-value=9.1 Score=22.79 Aligned_cols=66 Identities=12% Similarity=0.146 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHHhhcCCCccH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEMQARNVKPTE 100 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m~~~g~~~~~ 100 (118)
....+|.-|...++.++|...++++......| .....++..-...++ -+.+-+++..+.. ++-+..
T Consensus 12 k~~~ii~EYf~~~D~~Ea~~~l~eL~~p~~~~--~~V~~~I~~aldrk~~ere~~s~LL~~L~~-~~ls~~ 79 (165)
T 2rg8_A 12 TLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKS--GVPVLAVSLALEGKASHREMTSKLLSDLCG-TVMSTT 79 (165)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCSGGGG--HHHHHHHHHHHTSCHHHHHHHHHHHHHHBT-TTBCHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCcccHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-CCCCHH
Confidence 45678999999999999999999987433222 222333333333332 3345566666643 444333
No 280
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=76.54 E-value=12 Score=23.70 Aligned_cols=84 Identities=13% Similarity=0.010 Sum_probs=53.7
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC-------CC---CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP-------VK---DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTA 74 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~-------~~---~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 74 (118)
-|..+....++++|..+.++.+ .+ +...-...++.-.....-.-+..+.+++.. .++...-...+..
T Consensus 24 eLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~---~~~~~~~r~~v~~ 100 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS---SNEIVHLKSGTEN 100 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSSHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHHH
Confidence 3678888999999998887664 11 112223334444444444455555555532 4566777778889
Q ss_pred HhcCCChhhHHHHHHHH
Q 046694 75 CSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 75 ~~~~~~~~~a~~~~~~m 91 (118)
+.+.|+.+.|..+|=+.
T Consensus 101 L~rLg~~~~A~~lfL~~ 117 (235)
T 2d2s_A 101 MIKLGLPEQALDLFLQN 117 (235)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHCCChhHHHHHHHHH
Confidence 99999999999877553
No 281
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens}
Probab=75.44 E-value=7.3 Score=25.44 Aligned_cols=47 Identities=11% Similarity=-0.031 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCC
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVK 97 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~ 97 (118)
++++++.+.|+.|...++.-++..+++.=.++.+.++++.+...|..
T Consensus 175 ~L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~~riwD~~l~~g~~ 221 (310)
T 3hzj_A 175 DLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLN 221 (310)
T ss_dssp HHHHHHHHHTCCGGGTSHHHHHHTTTTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHCCcH
Confidence 35566667788888888888888888777788888888888776654
No 282
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.21 E-value=18 Score=25.05 Aligned_cols=89 Identities=11% Similarity=-0.015 Sum_probs=66.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC----CC-----CHhhHHHHHHHHHhcCCHHHHHHHHHHHHH----cCCCcc--HHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP----VK-----DSASWITLILGYGMLGELDVAINLFEAMRE----DGVEYY--PVSH 68 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~----~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~----~~~~p~--~~~~ 68 (118)
.|...|-..|++.+|..++.++. .. -+..|-.-++.|...+++..|..++.+... ....|+ ..-|
T Consensus 142 ~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~ 221 (445)
T 4b4t_P 142 DLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYY 221 (445)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHH
Confidence 35678888999999999888764 11 234677888999999999999999998742 222232 3456
Q ss_pred HHHHHHHhcCCChhhHHHHHHHHh
Q 046694 69 IGVLTACSLGGLVEKGKKFFDEMQ 92 (118)
Q Consensus 69 ~~ll~~~~~~~~~~~a~~~~~~m~ 92 (118)
......+...+++.+|.+.|.+..
T Consensus 222 ~~~~~~~~~e~~y~~a~~~y~e~~ 245 (445)
T 4b4t_P 222 NLLVKISLHKREYLEVAQYLQEIY 245 (445)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHH
Confidence 777777788889888887777763
No 283
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=73.96 E-value=7 Score=25.76 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCC
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVK 97 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~ 97 (118)
++++++.+.|+.|...++..++..+++.=.++.+.++++.+...|..
T Consensus 209 ~L~~hL~~~~i~~~~~~~~W~l~lF~~~lp~~~~lrlwD~~l~~g~~ 255 (331)
T 3qye_A 209 DLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGTE 255 (331)
T ss_dssp HHHHHHHHTTCCGGGTSHHHHHSTTTTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHCCcH
Confidence 45666677788887778888888887777788888888887666654
No 284
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=73.43 E-value=11 Score=21.81 Aligned_cols=61 Identities=8% Similarity=0.108 Sum_probs=41.8
Q ss_pred HHHhcC---CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHH
Q 046694 39 GYGMLG---ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101 (118)
Q Consensus 39 ~~~~~~---~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~ 101 (118)
++.++. +..+++.++.++.+.+-.-.....--+--++.+.|++++|.++.+.+.+ ++|+..
T Consensus 49 ~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~--~eP~N~ 112 (134)
T 3o48_A 49 GLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE--HERNNK 112 (134)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TCTTCH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--hCCCCH
Confidence 444444 5678899999987765211334444455677899999999999999977 455533
No 285
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=73.08 E-value=8.4 Score=20.34 Aligned_cols=37 Identities=14% Similarity=0.017 Sum_probs=20.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhh
Q 046694 43 LGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEK 83 (118)
Q Consensus 43 ~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~ 83 (118)
....++|.++++.+... ....|..+++++.+.+....
T Consensus 49 ~t~~~kar~Lld~l~~k----G~~af~~F~~aL~~~~~~~L 85 (94)
T 2p1h_A 49 PTQQQRAAMLIKMILKK----DNDSYVSFYNALLHEGYKDL 85 (94)
T ss_dssp SSHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHTTCHHH
T ss_pred CChHHHHHHHHHHHHHc----CHHHHHHHHHHHHHcCHHHH
Confidence 44566666666666543 34556666666665554333
No 286
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=72.91 E-value=3.5 Score=23.53 Aligned_cols=52 Identities=19% Similarity=0.180 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 31 ASWITLILGYGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 31 ~~~~~li~~~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
..=..++..+...+ .+-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 18 ~qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 70 (136)
T 1mzb_A 18 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 70 (136)
T ss_dssp HHHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEE
Confidence 33445666666666 67889999999988877778777777777777776554
No 287
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=72.84 E-value=6 Score=26.23 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC
Q 046694 52 LFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV 96 (118)
Q Consensus 52 ~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~ 96 (118)
+++++.+.|+.|....+.-++..+++.=.++.+.++++.+...|.
T Consensus 215 L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~lriWD~~l~eg~ 259 (334)
T 2qq8_A 215 LFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGE 259 (334)
T ss_dssp HHHHHHHTTCCGGGTHHHHHHTTTTTTSCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCCccchHHHHHHHHhcccCCHHHHHHHHHHHHHcCC
Confidence 555666778888888888888888877778888888888866663
No 288
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=71.59 E-value=20 Score=23.92 Aligned_cols=97 Identities=11% Similarity=0.044 Sum_probs=72.8
Q ss_pred HHHHHHHhhhCC---CCCHhhHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC-hhhHHHHH
Q 046694 15 IDLANKIFDRLP---VKDSASWITLILGYGMLG--ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL-VEKGKKFF 88 (118)
Q Consensus 15 ~~~a~~~~~~m~---~~~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~-~~~a~~~~ 88 (118)
++++..+++.+. ..+..+|+.---.+.+.+ .+++++.+++++.+... -|...|+----++.+.|. ++++.+.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dp-rNy~AW~~R~~vl~~l~~~~~eel~~~ 168 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE-RNFHCWDYRRFVAAQAAVAPAEELAFT 168 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 577888887765 457888887777777777 48999999999987532 267777766666677787 58999999
Q ss_pred HHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 89 DEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 89 ~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
+++.+..+. |...|+..-..+.+.
T Consensus 169 ~~~I~~~p~-N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 169 DSLITRNFS-NYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHCSC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-CHHHHHHHHHHHHHh
Confidence 999886643 777887766666554
No 289
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=71.29 E-value=4.8 Score=23.29 Aligned_cols=49 Identities=12% Similarity=0.045 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 33 WITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
=..++..+...+ +-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 21 R~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~ 69 (145)
T 3eyy_A 21 RQLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLVS 69 (145)
T ss_dssp HHHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEE
Confidence 344555555556 6789999999988877777777777777777776543
No 290
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=70.45 E-value=17 Score=22.62 Aligned_cols=52 Identities=15% Similarity=-0.002 Sum_probs=43.3
Q ss_pred CCHHHHHHHhhhCC-----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc
Q 046694 13 GRIDLANKIFDRLP-----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64 (118)
Q Consensus 13 ~~~~~a~~~~~~m~-----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~ 64 (118)
+...++..+|..|. ..-..-|...-..+...|++.+|..+|+.=.+.+-+|-
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~ 149 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPY 149 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 34668888888776 44667788888899999999999999999999888884
No 291
>3bge_A Predicted ATPase; structural genomics, predicted AAA+ATPase C-terminal fragmen protein structure initiative; 1.85A {Haemophilus influenzae} SCOP: a.80.1.2
Probab=68.86 E-value=15 Score=22.81 Aligned_cols=63 Identities=14% Similarity=0.055 Sum_probs=40.3
Q ss_pred HHHHHHHHhc---CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh-----hHHHHHHHHhhcCC
Q 046694 34 ITLILGYGML---GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE-----KGKKFFDEMQARNV 96 (118)
Q Consensus 34 ~~li~~~~~~---~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~-----~a~~~~~~m~~~g~ 96 (118)
-.+|+++.|+ .+++.|+-.+-+|.+.|-.|....=..++-+.-.-|..+ .|...++.....|.
T Consensus 8 Yd~ISAf~KSiRGSDpDAAly~LaRMl~~GEDp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~ 78 (201)
T 3bge_A 8 YDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCFTRVGA 78 (201)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGCTTHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHCC
Confidence 3467777766 689999999999999987666555555555555554322 34444444444443
No 292
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=68.35 E-value=7.7 Score=22.55 Aligned_cols=50 Identities=16% Similarity=0.110 Sum_probs=37.0
Q ss_pred HHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChh
Q 046694 33 WITLILGYGMLG-ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVE 82 (118)
Q Consensus 33 ~~~li~~~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~ 82 (118)
=..++..+...+ .+-.|.++++.+++.+...+..|.-.-|+.+.+.|-+.
T Consensus 19 R~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~ 69 (150)
T 2w57_A 19 RLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVT 69 (150)
T ss_dssp HHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEE
Confidence 344566666666 67789999999988877778877777788888777654
No 293
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=67.48 E-value=16 Score=21.37 Aligned_cols=61 Identities=8% Similarity=0.104 Sum_probs=40.7
Q ss_pred HHHHhcC---CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccH
Q 046694 38 LGYGMLG---ELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTE 100 (118)
Q Consensus 38 ~~~~~~~---~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~ 100 (118)
-++.++. +..+++.++.++.+.+-.-.....--+--++.+.|++++|.++.+.+.+ ++|+.
T Consensus 47 w~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~--~eP~n 110 (144)
T 1y8m_A 47 WGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE--HERNN 110 (144)
T ss_dssp HHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH--TCCCC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCCc
Confidence 3455554 4678888998887653221223333344567899999999999999988 45543
No 294
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=66.44 E-value=25 Score=25.49 Aligned_cols=71 Identities=8% Similarity=0.058 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHccccc
Q 046694 44 GELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYNQKA 117 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g~~~ 117 (118)
.+.+.......++..+ ++. +..---.++..|++.|..+.|.++++.+..+-+. +...+ .-+.+|.|+|+++
T Consensus 495 ~~~~~gr~~IselLpr-~Pl~Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~-~g~~g-eAL~~f~rA~~~~ 566 (570)
T 3f3f_C 495 GTRSAKKMVIAELLPH-YPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLS-AHNII-ESIANFSRAGKYE 566 (570)
T ss_dssp SCHHHHHHHHHHHGGG-CCCCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHC------------------------
T ss_pred cchhHHHHHHHHHhcc-CCCCCHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH-CccHH-HHHHHHHHcCChh
Confidence 4455566666666544 222 4556667788888888888888888887554333 33344 4555667777654
No 295
>2ko4_A Mediator of RNA polymerase II transcription subun; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_A
Probab=66.27 E-value=12 Score=19.58 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=24.8
Q ss_pred HHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 046694 20 KIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAM 56 (118)
Q Consensus 20 ~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m 56 (118)
.++.+++ .|++.||+-+...+-+.--..+++.+.+++
T Consensus 24 ~LL~kIPnLPpgVnTW~qI~el~qkk~i~~~~m~iik~i 62 (81)
T 2ko4_A 24 QLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEV 62 (81)
T ss_dssp HHHTTSSSCCTTTCBHHHHHHHHTTTSSCHHHHHHHHHH
T ss_pred HHHhhCCCCCCCcchHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4555555 468888888877776666666666666665
No 296
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=65.59 E-value=22 Score=22.17 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=29.3
Q ss_pred HHHHHHHhhhCCCC-C-------HhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 15 IDLANKIFDRLPVK-D-------SASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 15 ~~~a~~~~~~m~~~-~-------~~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
++.|..+|+.+..- | ...--..+..|.+.|.+++|.++|++.-
T Consensus 94 LESAl~v~~~I~~e~~~lheei~~Llk~qAV~VCiekg~Fk~A~eiLkr~f 144 (211)
T 3bqo_A 94 LESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFERIF 144 (211)
T ss_dssp HHHHHHHHTTSCSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHh
Confidence 45788888877621 1 1123345667888899999999998864
No 297
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=64.42 E-value=7.4 Score=19.11 Aligned_cols=28 Identities=18% Similarity=0.116 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHc-CCCccHHHHHHHHHHH
Q 046694 47 DVAINLFEAMRED-GVEYYPVSHIGVLTAC 75 (118)
Q Consensus 47 ~~a~~~~~~m~~~-~~~p~~~~~~~ll~~~ 75 (118)
++|...|.+|.++ +|. +.-||.-.++.+
T Consensus 3 eEae~aF~~lL~~~~V~-s~wsweqamr~i 31 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVD-STWSFSRIISEL 31 (59)
T ss_dssp THHHHHHHHHHHHTTCC-SSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCC-CCCcHHHHHHHh
Confidence 4556666666433 333 333444444444
No 298
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=63.96 E-value=32 Score=23.57 Aligned_cols=23 Identities=9% Similarity=0.237 Sum_probs=16.6
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP 26 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~ 26 (118)
.|...|.+.|+.++...++....
T Consensus 24 ~l~~~~~~~~~~~~~~~~~~~~~ 46 (394)
T 3txn_A 24 QQGELYKQEGKAKELADLIKVTR 46 (394)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 35667788888888877776664
No 299
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=63.76 E-value=20 Score=21.13 Aligned_cols=55 Identities=13% Similarity=0.118 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHH
Q 046694 47 DVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTET 101 (118)
Q Consensus 47 ~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~ 101 (118)
+++.++|..|.+.|+-- -..-|-..-..+...|++++|.++|..=.+.+-+|-..
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~r 137 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPREF 137 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHH
Confidence 34899999999998865 46678888888999999999999999988888887543
No 300
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.71 E-value=51 Score=25.78 Aligned_cols=112 Identities=8% Similarity=-0.116 Sum_probs=73.1
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc---------------------
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY--------------------- 63 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p--------------------- 63 (118)
++..+.+.+..+.|..+..-.+.....+| .+-..|...|++++|.++|.+.-. |+..
T Consensus 818 l~~~l~~~~~~~~~~~l~~~~~~~~~~~y-l~g~~~L~~ge~~~A~~~F~kaa~-~~~~~~~l~~~~~~~~~~~~~~~~~ 895 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQLIGWLNSDPIAVY-LKALIYLKSKEAVKAVRCFKTTSL-VLYSHTSQFAVLREFQEIAEKYHHQ 895 (1139)
T ss_dssp HHHHHHHHSCTTHHHHHHHHSCCCHHHHH-HHHHHHHHTTCHHHHHHHHHTCCC-SCTTCCCSCSSHHHHHHHHHTTTSC
T ss_pred HHHHHHHhhhHHHHHHHhhhccCCcHHHH-HHHHHHHhcCCHHHHHHHHHHHhh-hhcccchhhhhhccccccccccccc
Confidence 45556677777777777655554333333 344667788999999999977421 1110
Q ss_pred --cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC-C-cc--HHHHHHHHHHHHHcccccC
Q 046694 64 --YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV-K-PT--ETHYACMVYLLIKYNQKAR 118 (118)
Q Consensus 64 --~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~-~-~~--~~t~~~li~~~~~~g~~~~ 118 (118)
-..=|.-++..+.+.+..+.+.++-....+..- . ++ ...|..+.++..+.|++++
T Consensus 896 ~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~ 956 (1139)
T 4fhn_B 896 NLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDA 956 (1139)
T ss_dssp CSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGG
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHH
Confidence 012267788888899999988877766544321 1 22 2368889999999888764
No 301
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=63.68 E-value=8.5 Score=24.57 Aligned_cols=39 Identities=5% Similarity=-0.086 Sum_probs=24.4
Q ss_pred hcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHcc
Q 046694 76 SLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~g 114 (118)
...|+-+.+.+.+++..+.|..|.......++.+..+-|
T Consensus 47 l~~gd~~~~~~~~~~al~~g~~~~~i~~~~l~p~l~~vG 85 (258)
T 2i2x_B 47 IFEGEEDDVVEGLQAAIEAGKDPIDLIDDALMVGMGVVI 85 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHSCCTTTHHHHTHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 344677777777777777776665555555555554444
No 302
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=63.44 E-value=21 Score=21.29 Aligned_cols=86 Identities=10% Similarity=0.094 Sum_probs=53.7
Q ss_pred CCCHhhHHHHHHHHHhcCCH------HHHHHHHHHHHHcCCCccHH----HHHHHHH---HHhcCCChhhHHHHHHHHhh
Q 046694 27 VKDSASWITLILGYGMLGEL------DVAINLFEAMREDGVEYYPV----SHIGVLT---ACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~~~~------~~a~~~~~~m~~~~~~p~~~----~~~~ll~---~~~~~~~~~~a~~~~~~m~~ 93 (118)
..|..+|-..+...-+.|++ ++..++|++.... ++|+.. .|--+.= .+...+++++|.++|+.+.+
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~-~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~ 88 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA-LPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARA 88 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH-SCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc-CCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 45888899999999888998 8888999987664 566531 1111100 11233899999999999966
Q ss_pred cCCCccHHHHHHHHHHHHHcc
Q 046694 94 RNVKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 94 ~g~~~~~~t~~~li~~~~~~g 114 (118)
.+=.. ...|..--+.=.+.|
T Consensus 89 ~hKkF-AKiwi~~AqFEiRqg 108 (161)
T 4h7y_A 89 NCKKF-AFVHISFAQFELSQG 108 (161)
T ss_dssp HCTTB-HHHHHHHHHHHHHTT
T ss_pred HhHHH-HHHHHHHHHHHHHcc
Confidence 43222 444444333333333
No 303
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=63.37 E-value=21 Score=21.17 Aligned_cols=91 Identities=7% Similarity=-0.018 Sum_probs=55.4
Q ss_pred HHHhcCCHHHHHHHhhhCCC-CC-HhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH---HHHHHHHHhc-CCCh
Q 046694 8 FYTRTGRIDLANKIFDRLPV-KD-SASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS---HIGVLTACSL-GGLV 81 (118)
Q Consensus 8 ~~~~~~~~~~a~~~~~~m~~-~~-~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~---~~~ll~~~~~-~~~~ 81 (118)
.-++.|+++....+++.-.. .+ ..-++ .+...+..|..+.-.++.+-+.+.|..++... .+.+.-++.. ..+.
T Consensus 12 ~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T-~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~ 90 (186)
T 3t8k_A 12 AAAMLGTYEDFLELFEKGYEDKESVLKSN-ILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDI 90 (186)
T ss_dssp HHHHHSCHHHHHHHHHHSSSCHHHHHTTT-HHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCH
T ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCC-HHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcch
Confidence 34678999998888876542 12 22233 44555567787777788888888888776532 2333322222 2334
Q ss_pred hhHHHHHHHHhhcCCCcc
Q 046694 82 EKGKKFFDEMQARNVKPT 99 (118)
Q Consensus 82 ~~a~~~~~~m~~~g~~~~ 99 (118)
....++.+.+.+.|..++
T Consensus 91 ~~~~~iv~~Ll~~Gadin 108 (186)
T 3t8k_A 91 TGTTELCKIFLEKGADIT 108 (186)
T ss_dssp HHHHHHHHHHHHTTCCSS
T ss_pred hhHHHHHHHHHHCCCCCC
Confidence 455667777777776543
No 304
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=63.13 E-value=28 Score=22.99 Aligned_cols=48 Identities=8% Similarity=0.021 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCc
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKP 98 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~ 98 (118)
++++++.+.|+.|....+.-++..+++.=.++.+.++++.+...|...
T Consensus 230 ~L~~hL~~~~i~~~~f~~~W~~~lF~~~~p~~~~lrlWD~~l~~g~~~ 277 (345)
T 2qfz_A 230 QVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGF 277 (345)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHTTSTTTT
T ss_pred HHHHHHHHcCCchhhHHHHHHHHHHcccCCHHHHHHHHHHHHhCCCCh
Confidence 456667778999999999999999998888999999999998877553
No 305
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=63.02 E-value=26 Score=22.21 Aligned_cols=89 Identities=11% Similarity=-0.045 Sum_probs=56.2
Q ss_pred CCCHhhHHHHHHHHHhc-CCHHHHHH-----------HHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 27 VKDSASWITLILGYGML-GELDVAIN-----------LFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~-~~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
.|....|+..|...+.. |++.+++- +.+++.+.+..++...|...|+.|+ ..--+.+..+.+.+.+.
T Consensus 126 ~p~~~aYt~~ll~~a~~~g~~~~~laAl~PC~w~Y~eig~~l~~~~~~~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~ 204 (248)
T 3no6_A 126 PPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNKESVTSKWFQFYS-TEMDELVDVFDQLMDRL 204 (248)
T ss_dssp CHHHHHHHHHHHHHHHHCSSTHHHHHHHTHHHHHHHHHHHHHHHCTTCCTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 34667899988888887 87666533 3344444433224567899999999 44333444444444555
Q ss_pred CCCccHHHHHHHHHHHHHcccc
Q 046694 95 NVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 95 g~~~~~~t~~~li~~~~~~g~~ 116 (118)
+-..+......+...|.++-++
T Consensus 205 ~~~~s~~~~~~l~~~F~~a~~l 226 (248)
T 3no6_A 205 TKHCSETEKKEIKENFLQSTIH 226 (248)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHH
Confidence 5555677778888888766544
No 306
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=61.74 E-value=25 Score=21.65 Aligned_cols=90 Identities=7% Similarity=0.020 Sum_probs=55.5
Q ss_pred CCCHhhHHHHHHHHHhcCCHHHHHH-----------HHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 27 VKDSASWITLILGYGMLGELDVAIN-----------LFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~~~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
.|....|+..+...+..|++.+++- +-+++.+.+-.++...|...|+.|+..+--+.+..+.+.+.+.+
T Consensus 110 ~p~~~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y~~ig~~l~~~~~~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~ 189 (221)
T 3ibx_A 110 TLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLT 189 (221)
T ss_dssp CHHHHHHHHHHHHHHHHSCHHHHHHHTHHHHHHHHHHHHHHTCSSSTTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 3466788888888888888776643 23333333211234678999999885433333444444445555
Q ss_pred CCccHHHHHHHHHHHHHcccc
Q 046694 96 VKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 96 ~~~~~~t~~~li~~~~~~g~~ 116 (118)
-..+......+.+.|.++-++
T Consensus 190 ~~~~~~~~~~~~~~F~~a~~l 210 (221)
T 3ibx_A 190 LASSKQEIEKLKEIFITTSEY 210 (221)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHH
Confidence 556777788888888776544
No 307
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=61.54 E-value=18 Score=19.78 Aligned_cols=60 Identities=15% Similarity=0.107 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHH-----HhhcCCCccHHHHHHHHH
Q 046694 47 DVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDE-----MQARNVKPTETHYACMVY 108 (118)
Q Consensus 47 ~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~-----m~~~g~~~~~~t~~~li~ 108 (118)
-.|.++.+++..-|+.|+..+..-++.-|...+. + +.++.++ ....|..|+..+.+.+=+
T Consensus 26 Vsae~L~eEfdefGi~~~d~VldKc~ELC~~y~l-d-a~e~VeeWmAFsts~~g~~pT~enL~~FEh 90 (101)
T 2keb_A 26 ASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQ-N-EEGMVGELIAFCTSTHKVGLTSEILNSFEH 90 (101)
T ss_dssp CCHHHHHHHHHHHTCBCCHHHHHHHHHHHHHHTC-C-HHHHHHHHHHHHHHHTCSBCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC-C-HHHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 3467778888888999988888888888887764 2 3332222 255688999888876644
No 308
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=61.03 E-value=23 Score=20.89 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=38.4
Q ss_pred HHHHHhhhCCC-----CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc
Q 046694 17 LANKIFDRLPV-----KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64 (118)
Q Consensus 17 ~a~~~~~~m~~-----~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~ 64 (118)
++..+|..|.. .-..-|...-..+...|++.+|..+|+.=.+.+-+|-
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 135 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPR 135 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 46667766653 3556788888888899999999999999998888874
No 309
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=60.02 E-value=15 Score=18.40 Aligned_cols=47 Identities=11% Similarity=-0.121 Sum_probs=35.2
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
.++.++..++...-.+.++..+++..+.| ..+..+|.--++..++..
T Consensus 4 l~~Qll~l~Aed~AieDaiy~L~~aL~~g-~I~l~~ylK~vR~LaReQ 50 (65)
T 2f6m_A 4 GLNQLYNLVAQDYALTDTIEALSRMLHRG-TIPLDTFVKQGRELARQQ 50 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 46677777777778888888888888877 457777777777777643
No 310
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=59.19 E-value=6.2 Score=28.05 Aligned_cols=46 Identities=17% Similarity=0.269 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHH
Q 046694 44 GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t 102 (118)
.++++|+...++-++.+-..+ -|-+-.+.++|.++.++|+.||..|
T Consensus 212 ~~ldeal~~~~~a~~~~~~~S-------------Ig~~GNaadv~~~l~~~~i~~Dlvt 257 (551)
T 1x87_A 212 DSLDAALEMAKQAKEEKKALS-------------IGLVGNAAEVLPRLVETGFVPDVLT 257 (551)
T ss_dssp SCHHHHHHHHHHHHHTTCCEE-------------EEEESCHHHHHHHHHHTTCCCSEEC
T ss_pred CCHHHHHHHHHHHHHcCCceE-------------EEEeccHHHHHHHHHHCCCCCCCCC
Confidence 467777777777776654422 2445556778888877788776543
No 311
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=58.55 E-value=27 Score=20.87 Aligned_cols=85 Identities=13% Similarity=0.164 Sum_probs=57.7
Q ss_pred HHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHH
Q 046694 15 IDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 15 ~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
++++.+.|.... ..|..--...| -|+..- +.+.++|..|.+.||-- -..-|-..-..+...|++..|.++|..=
T Consensus 46 LErc~~~f~~~~~YknD~RyLklWl-~ya~~~--~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~G 122 (164)
T 2wvi_A 46 LERAVEALQGEKRYYSDPRFLNLWL-KLGRLC--NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEG 122 (164)
T ss_dssp HHHHHHHTTTCGGGTTCHHHHHHHH-HHHHHC--SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhccCHHHHHHHH-HHHHhc--CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445555554443 33444333333 233221 34778999999998875 4567788888888999999999999998
Q ss_pred hhcCCCccHHH
Q 046694 92 QARNVKPTETH 102 (118)
Q Consensus 92 ~~~g~~~~~~t 102 (118)
.+.+-+|-...
T Consensus 123 i~~~A~P~~~L 133 (164)
T 2wvi_A 123 IQQKAEPLERL 133 (164)
T ss_dssp HHTTCBSHHHH
T ss_pred HHcCCCcHHHH
Confidence 88888886443
No 312
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=58.24 E-value=6.1 Score=28.15 Aligned_cols=46 Identities=20% Similarity=0.263 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHH
Q 046694 44 GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t 102 (118)
.++++|+...++-++.+-..+ -|-+-.+.++|.++.++|+.||..|
T Consensus 217 ~~ldeal~~~~~a~~~~~~~S-------------Ig~~GNaadv~~~l~~~~i~~Dlvt 262 (557)
T 1uwk_A 217 TDLDDALVRIAKYTAEGKAIS-------------IALHGNAAEILPELVKRGVRPDMVT 262 (557)
T ss_dssp SSHHHHHHHHHHHHHTTCCCE-------------EEEESCHHHHHHHHHHHTCCCSEEC
T ss_pred CCHHHHHHHHHHHHHcCCceE-------------EEEeccHHHHHHHHHHCCCCCCCCC
Confidence 467788887777777654422 2445556778888877788776543
No 313
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=58.01 E-value=0.12 Score=37.01 Aligned_cols=82 Identities=21% Similarity=0.226 Sum_probs=64.4
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
....|+.+-++....+++.+|++.|-+- -|+..|..++....+.|.++.-.+++....+.- -++..=+.|+-
T Consensus 53 ~p~VWs~LgkAqL~~~~v~eAIdsyIkA------~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~--ke~~IDteLi~ 124 (624)
T 3lvg_A 53 EPAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA--RESYVETELIF 124 (624)
T ss_dssp CCCCSSSHHHHTTTSSSCTTTTTSSCCC------SCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTC--CSTTTTHHHHH
T ss_pred CccHHHHHHHHHHccCchHHHHHHHHhC------CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh--cccccHHHHHH
Confidence 4457888889998888888887655331 278889999999999999999999998776553 34455568999
Q ss_pred HHHHcccccC
Q 046694 109 LLIKYNQKAR 118 (118)
Q Consensus 109 ~~~~~g~~~~ 118 (118)
+|+|.+++.+
T Consensus 125 ayAk~~rL~e 134 (624)
T 3lvg_A 125 ALAKTNRLAE 134 (624)
T ss_dssp HHHTSCSSST
T ss_pred HHHhhCcHHH
Confidence 9999998764
No 314
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=57.80 E-value=6.3 Score=28.03 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHH
Q 046694 44 GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETH 102 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t 102 (118)
.++++|+...++-++.+-..+ -|-+-.+.++|.++.++|+.||..|
T Consensus 213 ~~ldeal~~~~~a~~~~~~~S-------------Ig~~GNaadv~~~l~~~~i~~Dlvt 258 (552)
T 2fkn_A 213 ASIEEALAWAEEAKLAGKPLS-------------IALLGNAAEVHHTLLNRGVKIDIVT 258 (552)
T ss_dssp SCHHHHHHHHHHHHHTTCCEE-------------EEEESCHHHHHHHHHTTTCCCSEEC
T ss_pred CCHHHHHHHHHHHHHcCCceE-------------EEEeccHHHHHHHHHHCCCCCCCCC
Confidence 467788887777777654422 2445556778888888888776543
No 315
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=57.46 E-value=12 Score=21.34 Aligned_cols=53 Identities=8% Similarity=-0.077 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKF 87 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~ 87 (118)
.|--.|...+.+++.+-|.++++-..+.| +...|.+.|-.|-..=++|.+.++
T Consensus 34 LykDAietAa~S~d~elaEeLL~yFVe~g---~kEcF~A~LytCYdLlrpDvVLEl 86 (125)
T 3qil_A 34 LYKDAMQYASESKDTELAEELLQWFLQEE---KRECFGACLFTCYDLLRPDVVLEL 86 (125)
T ss_dssp CSSHHHHTTTSSCCSHHHHHHHHHHTTSC---SHHHHHHHHHHHTTCSCTTHHHHT
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHHHHHcC---chHHHHHHHHHHHhccChHHHHHH
Confidence 46667777888999999999999998776 778888999999888888777654
No 316
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=57.33 E-value=11 Score=24.40 Aligned_cols=26 Identities=12% Similarity=0.351 Sum_probs=23.2
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhCCCC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRLPVK 28 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m~~~ 28 (118)
|.|+.-|..+|+++.|..+|++++..
T Consensus 38 n~l~R~FL~~gkl~AAr~l~~rlp~~ 63 (270)
T 3cqc_A 38 NAIMRKFLASKKHEAAKEVFVKIPQD 63 (270)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHcCcHHHHHHHHHHCChH
Confidence 67888999999999999999998844
No 317
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.11 E-value=51 Score=23.65 Aligned_cols=57 Identities=16% Similarity=0.075 Sum_probs=39.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhCCCCCH-hhHHHHH-------HHHHhcCCHHHHHHHHHHHHH
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRLPVKDS-ASWITLI-------LGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m~~~~~-~~~~~li-------~~~~~~~~~~~a~~~~~~m~~ 58 (118)
+|.+|..|...+.++.|.++..+..-|.. .+-+... ..+.-.+++.+|.+.+....+
T Consensus 234 ~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 234 INLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp HHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 68889999999999999999998764421 2222222 233446788889888887643
No 318
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=56.84 E-value=24 Score=19.85 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=39.2
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH--HHHHHHHhcC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH--IGVLTACSLG 78 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~~~~~ 78 (118)
.+...++.|+.+.+..+++.-. ..+..-++.+. ..+..|+.+.+ +.+.+.|..++.... ...+...+..
T Consensus 11 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~-~A~~~~~~~~v----~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 11 QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLH-FAAGYNRVSVV----EYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHH-HHHHTTCHHHH----HHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHH-HHHHcChHHHH----HHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 4555677788888888887433 12222223333 34456665443 444445555443221 1233444555
Q ss_pred CChhhHHHH
Q 046694 79 GLVEKGKKF 87 (118)
Q Consensus 79 ~~~~~a~~~ 87 (118)
|+.+.+..+
T Consensus 86 ~~~~~v~~L 94 (165)
T 3twr_A 86 GHYEVAELL 94 (165)
T ss_dssp TCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 666544433
No 319
>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A*
Probab=56.30 E-value=30 Score=22.30 Aligned_cols=46 Identities=13% Similarity=-0.054 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCC-ChhhHHHHHHHHhhcCCC
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGG-LVEKGKKFFDEMQARNVK 97 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~g~~ 97 (118)
++++++.+.|+ +...++..++..+++.- .++.+.++++.+...|..
T Consensus 189 ~L~~hL~~~~i-~~~~~~~W~ltlF~~~l~~~~~~~rlWD~~l~~g~~ 235 (292)
T 4hl4_A 189 ELHDFMQSAEV-GTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPL 235 (292)
T ss_dssp HHHHHHC-CCC-CSGGGHHHHHTTTTTTSCCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHcCC-CcchHHHHHHHHHhhhcCcHHHHHHHHHHHHHcCCc
Confidence 35666677777 45777788888887765 488899999998877754
No 320
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=55.96 E-value=22 Score=21.27 Aligned_cols=23 Identities=9% Similarity=-0.023 Sum_probs=16.1
Q ss_pred hHHHHHHHhcCCHHHHHHHhhhC
Q 046694 3 EPRLDFYTRTGRIDLANKIFDRL 25 (118)
Q Consensus 3 ~~ll~~~~~~~~~~~a~~~~~~m 25 (118)
+..|...++.|+++....+++.-
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~ 29 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILAD 29 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHC
T ss_pred cchHHHHHHhCCHHHHHHHHHhc
Confidence 34566677788888887777654
No 321
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=54.98 E-value=13 Score=23.67 Aligned_cols=79 Identities=10% Similarity=0.147 Sum_probs=61.8
Q ss_pred HHHHHHHhhhCCC-----------CCHhhHHHHHHHHHhcC---------CHHHHHHHHHHHHHcCCC-ccHHHHHHHHH
Q 046694 15 IDLANKIFDRLPV-----------KDSASWITLILGYGMLG---------ELDVAINLFEAMREDGVE-YYPVSHIGVLT 73 (118)
Q Consensus 15 ~~~a~~~~~~m~~-----------~~~~~~~~li~~~~~~~---------~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~ 73 (118)
.+.|..+..+|-- ....-|..+-.+|++.| +.+...++.+-..+.|++ .=+..|+++|+
T Consensus 147 vetAiaml~dmG~~SvKffPm~Gl~~l~E~~avAka~a~~g~~lEPTGGIdl~N~~~I~~i~l~aGv~~viPHIYssIID 226 (249)
T 3m0z_A 147 LETAIALLKDMGGSSIKYFPMGGLKHRAEFEAVAKACAAHDFWLEPTGGIDLENYSEILKIALDAGVSKIIPHIYSSIID 226 (249)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTTTHHHHHHHHHHHHHTTCEEEEBSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBC
T ss_pred HHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCccHhhHHHHHHHHHHcCCCeecccccceecc
Confidence 6788889988862 36667889999999987 567778888888888876 34567888887
Q ss_pred HHhcCCChhhHHHHHHHHhh
Q 046694 74 ACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~ 93 (118)
--.-.-+++...+++..+++
T Consensus 227 k~TG~TrpedV~~ll~~~K~ 246 (249)
T 3m0z_A 227 KASGNTRPADVRQLLEMTKQ 246 (249)
T ss_dssp TTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 76667788999999888755
No 322
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=54.47 E-value=32 Score=20.53 Aligned_cols=49 Identities=14% Similarity=0.111 Sum_probs=38.0
Q ss_pred HHHHHhhhCC-----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccH
Q 046694 17 LANKIFDRLP-----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP 65 (118)
Q Consensus 17 ~a~~~~~~m~-----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~ 65 (118)
++..+|..|. ..-..-|...-..+...|++.+|.++|+.=.+.+-+|-.
T Consensus 78 ~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~ 131 (164)
T 2wvi_A 78 EPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLE 131 (164)
T ss_dssp CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH
Confidence 3556666664 345667888888888899999999999999988888754
No 323
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=54.14 E-value=60 Score=23.58 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=28.2
Q ss_pred HHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHH
Q 046694 20 KIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGK 85 (118)
Q Consensus 20 ~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~ 85 (118)
.++.+.+-.+-.--.-++..|.+.|..+.|.++++.+-..-+. +...| ..|..|+|+|+++...
T Consensus 506 elLpr~Pl~Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~-~g~~g-eAL~~f~rA~~~~~Vk 569 (570)
T 3f3f_C 506 ELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLS-AHNII-ESIANFSRAGKYELVK 569 (570)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHC---------------------------
T ss_pred HHhccCCCCCHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH-CccHH-HHHHHHHHcCChhhcc
Confidence 3444444334445667889999999999999999988544222 33444 7778888998887653
No 324
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=53.90 E-value=37 Score=21.07 Aligned_cols=88 Identities=8% Similarity=-0.051 Sum_probs=54.7
Q ss_pred CCCHhhHHHHHHHHHhc-CCHHHHHH-----------HHHHHHHcCCCccHHHHHHHHHHHhcCCChhhH-HHHHHHHhh
Q 046694 27 VKDSASWITLILGYGML-GELDVAIN-----------LFEAMREDGVEYYPVSHIGVLTACSLGGLVEKG-KKFFDEMQA 93 (118)
Q Consensus 27 ~~~~~~~~~li~~~~~~-~~~~~a~~-----------~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a-~~~~~~m~~ 93 (118)
.|....|+..+...+.. |++.+++- +.+++.+.+..++...|...|+.|+ ..+..+ ..+.+.+.+
T Consensus 107 ~p~~~aY~~~l~~~a~~~~~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~~~~~~y~~WI~~y~--~~f~~~v~~~~~~ld~ 184 (229)
T 4fn6_A 107 PPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDTAKWFDFYS--TEMDDIINVFESLMNK 184 (229)
T ss_dssp CHHHHHHHHHHHHHHHHCCSHHHHHHHHTHHHHHHHHHHHHHHTCTTCCTTSTHHHHHHHHT--TTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCChHHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 45667888888888888 88776543 2233333332213468999999999 445544 444444444
Q ss_pred cCCCccHHHHHHHHHHHHHcccc
Q 046694 94 RNVKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 94 ~g~~~~~~t~~~li~~~~~~g~~ 116 (118)
.+-..+......+...|.++-++
T Consensus 185 ~~~~~~~~~~~~~~~~F~~a~~l 207 (229)
T 4fn6_A 185 LAESMSDKELEQVKQVFLESCIH 207 (229)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 44445666777788877766543
No 325
>1q2z_A ATP-dependent DNA helicase II, 80 kDa subunit; KU, DNA repair, protein structure, spectroscopy, DNA-PK, KU86, KU80, protein binding; NMR {Homo sapiens} SCOP: a.118.19.1
Probab=53.35 E-value=7.9 Score=21.81 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHcCCC-ccHHHHHHHHHHHh---cCCChhhHHHHHHHHhhcCCC
Q 046694 45 ELDVAINLFEAMREDGVE-YYPVSHIGVLTACS---LGGLVEKGKKFFDEMQARNVK 97 (118)
Q Consensus 45 ~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~~~~---~~~~~~~a~~~~~~m~~~g~~ 97 (118)
.+++|.+++..|++.-+. -.+..||.+|..+- ..+++ ..++..+.+.++.
T Consensus 42 ~y~ka~ecl~~~R~~~i~~~ep~~yN~Fl~~Lk~~~~~~~l---~~FW~~iv~~~lg 95 (120)
T 1q2z_A 42 YFMKSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQL---NHFWEIVVQDGIT 95 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTST---THHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhH---HHHHHHHHHCCcC
Confidence 688999999999876554 36788888887765 33333 4555566655553
No 326
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=51.66 E-value=55 Score=22.42 Aligned_cols=57 Identities=11% Similarity=-0.020 Sum_probs=46.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHc--CCC---ccHHHHHHHHHHHhcCCChhhHHHHHHHH
Q 046694 35 TLILGYGMLGELDVAINLFEAMRED--GVE---YYPVSHIGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 35 ~li~~~~~~~~~~~a~~~~~~m~~~--~~~---p~~~~~~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
-+...|...|++.+|.+++.++.+. ... --..+|..-++.|...+++.++..++...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a 165 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSA 165 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 5788999999999999999999763 111 23466777888899999999999999887
No 327
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=51.00 E-value=44 Score=21.07 Aligned_cols=84 Identities=15% Similarity=0.260 Sum_probs=57.2
Q ss_pred HHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHhcCCChhhHHHHHHHH
Q 046694 15 IDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY-YPVSHIGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 15 ~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
++++.+.|.... ..|.. |--+---|+.. .+.+.++|..|.+.||-- -..-|-..-..+...|++.+|.++|..=
T Consensus 100 LErc~~~F~~~~rYknD~R-yLklWl~Ya~~--~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~G 176 (223)
T 4aez_C 100 LERCTREFVRNPLYKDDVR-YLRIWMQYVNY--IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKG 176 (223)
T ss_dssp HHHHHHHTTTCGGGTTCHH-HHHHHHHHHTT--CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccCCHH-HHHHHHHHHHc--cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344444444443 22433 33333334443 257779999999998875 4667888888889999999999999998
Q ss_pred hhcCCCccHH
Q 046694 92 QARNVKPTET 101 (118)
Q Consensus 92 ~~~g~~~~~~ 101 (118)
.+.+-+|-..
T Consensus 177 i~~~A~P~~r 186 (223)
T 4aez_C 177 KRMKAKPFLR 186 (223)
T ss_dssp HHHTCBSHHH
T ss_pred HHcCCccHHH
Confidence 8888777443
No 328
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=49.76 E-value=8.8 Score=18.17 Aligned_cols=21 Identities=10% Similarity=0.069 Sum_probs=15.2
Q ss_pred CChhhHHHHHHHHhhcCCCcc
Q 046694 79 GLVEKGKKFFDEMQARNVKPT 99 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~ 99 (118)
+++..|.++++.+.+.|-.|+
T Consensus 7 RDv~RaiELle~lq~sgevp~ 27 (53)
T 1zl8_A 7 RDVQRILELMEHVQKTGEVNN 27 (53)
T ss_dssp HHHHHHHHHHHHHGGGSSSTH
T ss_pred HHHHHHHHHHHHHHHcCCCCc
Confidence 356778888888877776654
No 329
>3crd_A Raidd; caspase recruitment domain, apoptosis, homophilic interaction; NMR {Homo sapiens} SCOP: a.77.1.3
Probab=49.52 E-value=29 Score=18.55 Aligned_cols=29 Identities=14% Similarity=0.206 Sum_probs=20.1
Q ss_pred CHHHHHHHhhhCCCCCHhhHHHHHHHHHh
Q 046694 14 RIDLANKIFDRLPVKDSASWITLILGYGM 42 (118)
Q Consensus 14 ~~~~a~~~~~~m~~~~~~~~~~li~~~~~ 42 (118)
..++|.++++.++..+...|..++.++..
T Consensus 50 ~~~k~~~Lld~L~~rG~~Af~~F~~aL~~ 78 (100)
T 3crd_A 50 GLRKTMLLLDILPSRGPKAFDTFLDSLQE 78 (100)
T ss_dssp SHHHHHHHHHHTTTSCSSCHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHh
Confidence 45677777777776676777777777654
No 330
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=49.28 E-value=37 Score=19.70 Aligned_cols=90 Identities=10% Similarity=0.045 Sum_probs=48.0
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc---cHHHHHHHHHHHhc
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY---YPVSHIGVLTACSL 77 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p---~~~~~~~ll~~~~~ 77 (118)
-+...+..|+.+-+..+++.-. .++..-.+.+ ...+..|..+.+..+++.-. ..+ +..-.+.+..+ +.
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t~L~~A-~~ 149 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL-IPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYTALIEA-VG 149 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH-HHHHHTTCHHHHHHHHHHCC---CCTTCCCTTSCCHHHHH-HH
T ss_pred HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH-HHHHHcCCHHHHHHHHHcCC---CCcCCCCCCCCCHHHHH-HH
Confidence 3555667888888888885543 2233223333 33455677766555554421 222 23333444444 34
Q ss_pred CCC-hhhHHHHHHHHhhcCCCcc
Q 046694 78 GGL-VEKGKKFFDEMQARNVKPT 99 (118)
Q Consensus 78 ~~~-~~~a~~~~~~m~~~g~~~~ 99 (118)
.++ ...-.++.+.+.+.|..++
T Consensus 150 ~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 150 LREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCTT
T ss_pred hccchhhHHHHHHHHHHCCCCCC
Confidence 444 3344666777777777655
No 331
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=48.93 E-value=13 Score=23.95 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=61.3
Q ss_pred HHHHHHHhhhCCC-----------CCHhhHHHHHHHHHhcC---------CHHHHHHHHHHHHHcCCC-ccHHHHHHHHH
Q 046694 15 IDLANKIFDRLPV-----------KDSASWITLILGYGMLG---------ELDVAINLFEAMREDGVE-YYPVSHIGVLT 73 (118)
Q Consensus 15 ~~~a~~~~~~m~~-----------~~~~~~~~li~~~~~~~---------~~~~a~~~~~~m~~~~~~-p~~~~~~~ll~ 73 (118)
.+.|..+..+|-- ....-|..+-.+|++.| +.+...++.+-..+.|++ .=+-.|+++|+
T Consensus 170 vetAiaml~dmG~~SvKffPM~Gl~~leEl~avAkAca~~g~~lEPTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIID 249 (275)
T 3m6y_A 170 IKTAIALVRDMGGNSLKYFPMKGLAHEEEYRAVAKACAEEGFALEPTGGIDKENFETIVRIALEANVEQVIPHVYSSIID 249 (275)
T ss_dssp HHHHHHHHHHHTCCEEEECCCTTTTTHHHHHHHHHHHHHHTCEEEEBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBC
T ss_pred HHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCccHhHHHHHHHHHHHcCCCeecccccceecc
Confidence 5788888888862 36667888999999987 567778888888888876 34567888887
Q ss_pred HHhcCCChhhHHHHHHHHhh
Q 046694 74 ACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 74 ~~~~~~~~~~a~~~~~~m~~ 93 (118)
--.-.-+++...+++..+++
T Consensus 250 k~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 250 KETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp TTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 76667788888888888754
No 332
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=48.24 E-value=1.1e+02 Score=24.90 Aligned_cols=33 Identities=6% Similarity=-0.010 Sum_probs=20.2
Q ss_pred hcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 42 MLGELDVAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 42 ~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
.++++..|++.+.++.++. |+...|..++..+.
T Consensus 1296 ~~~~~g~~~k~l~k~~~~k--~~~~~~~~~~~~~~ 1328 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEEK--RTRDHFVELAAING 1328 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHHT--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHH
Confidence 4567777777777776653 55566655555443
No 333
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=46.76 E-value=35 Score=20.63 Aligned_cols=49 Identities=6% Similarity=-0.091 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 046694 63 YYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIK 112 (118)
Q Consensus 63 p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~ 112 (118)
|....++-+++.++.-.-++.+..++++....|. .+..+|---++.++|
T Consensus 109 ~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g~-I~ld~ylK~vR~LaR 157 (174)
T 2p22_A 109 AKTDGLNQLYNLVAQDYALTDTIECLSRMLHRGT-IPLDTFVKQGRELAR 157 (174)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 3446678888888888888888888888888774 567777766666665
No 334
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=46.42 E-value=43 Score=21.09 Aligned_cols=49 Identities=12% Similarity=0.118 Sum_probs=39.2
Q ss_pred HHHHHHhhhCC-----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc
Q 046694 16 DLANKIFDRLP-----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY 64 (118)
Q Consensus 16 ~~a~~~~~~m~-----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~ 64 (118)
+++..+|..|. ..-..-|...-..+...|++.+|..+|+.=.+.+-+|-
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 184 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPF 184 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 45666776665 34666788888889999999999999999998887773
No 335
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A*
Probab=45.98 E-value=24 Score=24.01 Aligned_cols=45 Identities=9% Similarity=0.113 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
++++++.+.|+.|....+.-++..+++.=.++.+.++++.+...|
T Consensus 217 ~L~~hL~~~~i~~~~f~~rW~l~LF~~~~p~~~vlrlWD~~l~eg 261 (396)
T 1fkm_A 217 DLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSET 261 (396)
T ss_dssp HHHHHHHHTTCCTHHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHCC
Confidence 466677778999999999999999998888999999999997666
No 336
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=45.69 E-value=43 Score=19.39 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHH-cCCCc---cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC
Q 046694 46 LDVAINLFEAMRE-DGVEY---YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV 96 (118)
Q Consensus 46 ~~~a~~~~~~m~~-~~~~p---~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~ 96 (118)
++.+.++.++..+ .|+.| ++.++.-.++...+.|-++....+.+....++.
T Consensus 54 ~Elawk~~k~~L~~~g~~~~~~~~~s~rd~~r~a~~~GlI~d~~~w~~m~~~RN~ 108 (146)
T 1jog_A 54 YELSLKMMKRQLQQDAINTDDIGAYGFKDILREALRFGLIGDMSKWVAYRDMRNI 108 (146)
T ss_dssp HHHHHHHHHHHHHHHTCSCCCTTSCCHHHHHHHHHHTTSCSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCHHHHHHHHHHcCCCCcHHHHHHHHHHhhH
Confidence 5666666666643 56654 478889999999999998877544444455554
No 337
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=45.50 E-value=41 Score=19.11 Aligned_cols=75 Identities=7% Similarity=0.013 Sum_probs=45.9
Q ss_pred HhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhh---HHHHHHHHhhcCCCc--cHHHHHHHHHHHHHccc
Q 046694 41 GMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEK---GKKFFDEMQARNVKP--TETHYACMVYLLIKYNQ 115 (118)
Q Consensus 41 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~---a~~~~~~m~~~g~~~--~~~t~~~li~~~~~~g~ 115 (118)
.....+..+.+-|.+-...|. |+..+-..+--++.+..+.+. ++.+++++.+.+ .| .....-.|--++.|.|+
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~ 89 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKE 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhh
Confidence 334445566666666555444 666666666667777776665 999999997764 23 23333345556667776
Q ss_pred cc
Q 046694 116 KA 117 (118)
Q Consensus 116 ~~ 117 (118)
.+
T Consensus 90 Y~ 91 (126)
T 1nzn_A 90 YE 91 (126)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 338
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=43.71 E-value=50 Score=19.68 Aligned_cols=83 Identities=7% Similarity=0.013 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCHHHHHHHhhhC-------CCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH--HHHHHH
Q 046694 4 PRLDFYTRTGRIDLANKIFDRL-------PVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH--IGVLTA 74 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m-------~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~ 74 (118)
+.|..-++.|+.+.+..+++.+ ..+|..-++.+ ...+..|+.+- ++.+.+.|..|+.... ...+..
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L-~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPL-HLAVITTLPSV----VRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHH-HHHHHTTCHHH----HHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHH-HHHHHcCCHHH----HHHHHHcCCCccccCCCCCCHHHH
Confidence 3466667788888888777632 12233333333 33445666654 4444455555443211 123444
Q ss_pred HhcCCChhhHHHHHHHH
Q 046694 75 CSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 75 ~~~~~~~~~a~~~~~~m 91 (118)
.+..|+.+....+++.-
T Consensus 86 A~~~~~~~~~~~Ll~~~ 102 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSA 102 (241)
T ss_dssp HHHTTCHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHcC
Confidence 45566666555555543
No 339
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=43.61 E-value=32 Score=17.38 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhc
Q 046694 45 ELDVAINLFEAMREDGVEYYPVSHIGVLTACSL 77 (118)
Q Consensus 45 ~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 77 (118)
..++|...|.+|..+.-.....+|.-.+..+..
T Consensus 13 t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~ 45 (71)
T 1uzc_A 13 TKEEAKQAFKELLKEKRVPSNASWEQAMKMIIN 45 (71)
T ss_dssp SHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHcc
Confidence 356677777777543222333455555554443
No 340
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=43.32 E-value=58 Score=20.25 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=43.8
Q ss_pred HHHHHHHHHhc---CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh-----hhHHHHHHHHhhcCC
Q 046694 33 WITLILGYGML---GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV-----EKGKKFFDEMQARNV 96 (118)
Q Consensus 33 ~~~li~~~~~~---~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~-----~~a~~~~~~m~~~g~ 96 (118)
.-.+|+++.|+ .+++.|+-.+-+|.+.| .|....=..++-+...-|.. ..|...++.....|.
T Consensus 14 HYd~iSAf~KSiRGSDpDAAly~LaRml~~G-Dp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~ 84 (204)
T 2r9g_A 14 HYDVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAAAARTVNAVLAAEKLGL 84 (204)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhCC
Confidence 44567777776 78999999999999999 76666555666666666653 235555555566665
No 341
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=42.64 E-value=47 Score=18.98 Aligned_cols=75 Identities=16% Similarity=0.046 Sum_probs=35.8
Q ss_pred HHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH--HHHHHHHhcCCC
Q 046694 7 DFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH--IGVLTACSLGGL 80 (118)
Q Consensus 7 ~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~ll~~~~~~~~ 80 (118)
...++.|+.+.+..+++.-. .++..-++.+.. .+..|+.+.+ +.+.+.|..++.... ...+...+..|+
T Consensus 10 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~~~~~~~v----~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 10 FTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHW-ACREGRSAVV----EMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp HHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHH-HHHTTCHHHH----HHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHH-HHHcCcHHHH----HHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 34466788888888877533 223333333333 3455665433 333444544443211 123333445555
Q ss_pred hhhHHH
Q 046694 81 VEKGKK 86 (118)
Q Consensus 81 ~~~a~~ 86 (118)
.+.+..
T Consensus 85 ~~~v~~ 90 (179)
T 3f6q_A 85 RDIVQK 90 (179)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544333
No 342
>1rw2_A ATP-dependent DNA helicase II, 80 kDa subunit; KU80, NHEJ, structure, DNA-PK, DNA binding protein; NMR {Homo sapiens} SCOP: a.118.19.1
Probab=42.12 E-value=10 Score=22.34 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHHHcCCCc-cHHHHHHHHHHHh---cCCChhhHHHHHHHHhhcCC
Q 046694 45 ELDVAINLFEAMREDGVEY-YPVSHIGVLTACS---LGGLVEKGKKFFDEMQARNV 96 (118)
Q Consensus 45 ~~~~a~~~~~~m~~~~~~p-~~~~~~~ll~~~~---~~~~~~~a~~~~~~m~~~g~ 96 (118)
.+++|.+++..|++.-+.. .+..||.+|..+- ..++. ..++..+...++
T Consensus 73 ~y~KA~ecL~~lR~~~i~~~ep~~yN~Fl~~LK~~l~~~~l---~~FW~~Iv~~~l 125 (152)
T 1rw2_A 73 YFMKSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQL---NHFWEIVVQDGI 125 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHSCC---HHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHhhhH---HHHHHHHHHCCc
Confidence 5888888888888764432 5677787777664 23333 445555655554
No 343
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=41.83 E-value=58 Score=19.85 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP 26 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~ 26 (118)
+.+...++.|+++.+..+++.-.
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g~ 29 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGGA 29 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hHHHHHHHcCCHHHHHHHHHcCC
Confidence 45666677888888877777543
No 344
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=41.81 E-value=38 Score=20.49 Aligned_cols=53 Identities=9% Similarity=-0.076 Sum_probs=44.7
Q ss_pred CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh
Q 046694 28 KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
|....++.++..++...-.+.++..+++....|. .+..+|.--++.+++..-+
T Consensus 109 ~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g~-I~ld~ylK~vR~LaReQF~ 161 (174)
T 2p22_A 109 AKTDGLNQLYNLVAQDYALTDTIECLSRMLHRGT-IPLDTFVKQGRELARQQFL 161 (174)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999999999999999884 6888888888888874433
No 345
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=41.34 E-value=32 Score=16.69 Aligned_cols=21 Identities=33% Similarity=0.291 Sum_probs=11.1
Q ss_pred cCCHHHHHHHHHHHHHcCCCc
Q 046694 43 LGELDVAINLFEAMREDGVEY 63 (118)
Q Consensus 43 ~~~~~~a~~~~~~m~~~~~~p 63 (118)
.|+++.|.+.+-+|...+..|
T Consensus 36 ~gdvd~aI~~LL~m~~~~~~~ 56 (59)
T 1wgl_A 36 RGNKDAAINSLLQMGEEPSGP 56 (59)
T ss_dssp TTCHHHHHHHHHHSSCCCCSC
T ss_pred CCCHHHHHHHHHcCcCCCCCC
Confidence 355555555555555444444
No 346
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=41.16 E-value=32 Score=16.67 Aligned_cols=22 Identities=9% Similarity=0.169 Sum_probs=14.1
Q ss_pred cCCHHHHHHHHHHHHHcC-CCcc
Q 046694 43 LGELDVAINLFEAMREDG-VEYY 64 (118)
Q Consensus 43 ~~~~~~a~~~~~~m~~~~-~~p~ 64 (118)
..+++.|...|.+++..| ++|+
T Consensus 33 ~Wd~~~A~~~F~~l~~~~~IP~e 55 (59)
T 1oai_A 33 NWDYTRSAQAFTHLKAKGEIPEV 55 (59)
T ss_dssp TTCHHHHHHHHHHHHHTTCSCGG
T ss_pred CCCHHHHHHHHHHHHHcCCCCHH
Confidence 457777777777776543 4443
No 347
>1dp3_A TRAM protein; helix-loop-helix, DNA binding protein; NMR {Escherichia coli} SCOP: a.55.1.2
Probab=40.89 E-value=16 Score=17.59 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=29.4
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 40 YGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 40 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
|.+..-.++...+..+=++.|..+..++|++..+.+...|
T Consensus 6 Yvs~~v~~~I~~ive~r~qeGA~~~dvs~Ssv~smLleLG 45 (55)
T 1dp3_A 6 YVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELG 45 (55)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTCCSTTCCHHHHHHHHHHHT
T ss_pred ehhhHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHh
Confidence 3444456777777777788888888888888877776665
No 348
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=40.78 E-value=49 Score=18.67 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=24.2
Q ss_pred HHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHH
Q 046694 6 LDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLF 53 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~ 53 (118)
|...++.|+++.+..+++.-. .++..-++.+..+ +..|+.+.+..++
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A-~~~~~~~~v~~Ll 56 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA-SAFGEIETVRFLL 56 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHH-HHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHH-HHcCCHHHHHHHH
Confidence 344566777777777776543 2233333333333 3456654444443
No 349
>1b79_A DNAB helicase; hexamer, DNA replication, hydrolase; 2.30A {Escherichia coli} SCOP: a.81.1.1 PDB: 1jwe_A
Probab=40.42 E-value=47 Score=18.37 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhh--HHHHHHHHhhc-CCCccHHHHHHHH
Q 046694 46 LDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEK--GKKFFDEMQAR-NVKPTETHYACMV 107 (118)
Q Consensus 46 ~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~--a~~~~~~m~~~-g~~~~~~t~~~li 107 (118)
.....+.+.++.+.|.++|..|...-+ .+.|.++. +..++.++.+. .-..+...|-.++
T Consensus 55 H~~If~ai~~L~~~g~piD~vtv~~~L---~~~~~l~~~GG~~yL~~L~~~~ps~ani~~Ya~iV 116 (119)
T 1b79_A 55 HRHIFTEMARLQESGSPIDLITLAESL---ERQGQLDSVGGFAYLAELSKNTPSAANISAYADIV 116 (119)
T ss_dssp HHHHHHHHHHHHHTTCCCSHHHHHHHH---HTTTTHHHHTHHHHHHHHHHHSCSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHH---hccCchhhcCcHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 445555555666778778877766655 34555554 34555555443 3344666666554
No 350
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=40.24 E-value=22 Score=17.17 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=10.8
Q ss_pred CCHHHHHHHHHHHHHcCCCcc
Q 046694 44 GELDVAINLFEAMREDGVEYY 64 (118)
Q Consensus 44 ~~~~~a~~~~~~m~~~~~~p~ 64 (118)
.+++.|...|.+. +..++|+
T Consensus 33 Wd~~~A~~~F~~~-~~~IP~e 52 (57)
T 2jp7_A 33 WNYEVAIKGFQSS-MNGIPRE 52 (57)
T ss_dssp TCSHHHHHHHHHS-TTTSCHH
T ss_pred CCHHHHHHHHHHH-HcCCCHH
Confidence 4566666666664 2334443
No 351
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=39.82 E-value=38 Score=20.58 Aligned_cols=42 Identities=26% Similarity=0.277 Sum_probs=29.5
Q ss_pred HHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 046694 17 LANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 17 ~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 58 (118)
....+.+.++ +.+-.-.-.+|.|+.+.|.+++|.++.+++..
T Consensus 17 ~~~~~~~~LR~qrHdf~NkLqvI~GLlql~~ydea~~yI~~~~~ 60 (192)
T 1ixm_A 17 LTNELIHLLGHSRHDWMNKLQLIKGNLSLQKYDRVFEMIEEMVI 60 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3344444443 22444455789999999999999999999864
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=39.47 E-value=1.3e+02 Score=23.16 Aligned_cols=108 Identities=8% Similarity=-0.117 Sum_probs=70.6
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc---------------------
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY--------------------- 63 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p--------------------- 63 (118)
++..+...|..+-|.++..-.+.....+| .+-.+|...|++++|..+|++.- .|+..
T Consensus 816 l~~~L~~~~~~~~a~eL~~~~~~t~~~~y-v~gr~~L~~ge~~~A~~~F~kAA-~gl~~~~~~~~~~~~~~~ll~~~e~~ 893 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQLIGWLNSDPIAVY-LKALIYLKSKEAVKAVRCFKTTS-LVLYSHTSQFAVLREFQEIAEKYHHQ 893 (950)
T ss_dssp HHHHHHHTTCHHHHHHHGGGCCSSHHHHH-HHHHHHHHTTCHHHHHHHHHTCC-CTTCSSCCSCGGGHHHHHHHHHTTTC
T ss_pred HHHHHHHhcHHHHHHHHHhhcCCChHHHH-HHHHHHHHcCCHHHHHHHHHHHh-hhcccCcccccchhhhhhccCccccc
Confidence 45556677888888887776664333343 45577788899999999998742 12211
Q ss_pred --cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCcc----HHHHHHHHHHHHHcc
Q 046694 64 --YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPT----ETHYACMVYLLIKYN 114 (118)
Q Consensus 64 --~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~----~~t~~~li~~~~~~g 114 (118)
...=|..+++-+-+.+.++-+.++-+.....--.-| ...|+.+.++.+..|
T Consensus 894 ~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 894 NLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp SHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhCC
Confidence 011367788888888888888877777654321212 346777777777655
No 353
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=38.71 E-value=62 Score=19.25 Aligned_cols=60 Identities=13% Similarity=-0.038 Sum_probs=40.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc--cHHHHHHHHH-HH-----hcCCChhhHHHHHHHHhh
Q 046694 33 WITLILGYGMLGELDVAINLFEAMREDGVEY--YPVSHIGVLT-AC-----SLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p--~~~~~~~ll~-~~-----~~~~~~~~a~~~~~~m~~ 93 (118)
|..-+..|- .|++-+|.++|++.=...-.+ ....|-.+|. .. .+.|+...|.+++++-..
T Consensus 36 ~~~~i~lFn-~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYN-SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 444444443 499999999999984443344 5566777777 22 257899999999988733
No 354
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=38.64 E-value=73 Score=20.06 Aligned_cols=78 Identities=8% Similarity=-0.064 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHc--CCCc----cHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHH
Q 046694 35 TLILGYGMLGELDVAINLFEAMRED--GVEY----YPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVY 108 (118)
Q Consensus 35 ~li~~~~~~~~~~~a~~~~~~m~~~--~~~p----~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~ 108 (118)
--++.+....++++|..+.++.++. ++++ +.......++.-.....-..+..+.+++ .. .++.......+.
T Consensus 23 deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l-~~--~~~~~~~r~~v~ 99 (235)
T 2d2s_A 23 EEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI-LS--SNEIVHLKSGTE 99 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH-HT--CSSHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--cCCHHHHHHHHH
Confidence 4567888899999999999988642 3332 1122222333333333333444444444 22 334444555555
Q ss_pred HHHHccc
Q 046694 109 LLIKYNQ 115 (118)
Q Consensus 109 ~~~~~g~ 115 (118)
.+.+.|+
T Consensus 100 ~L~rLg~ 106 (235)
T 2d2s_A 100 NMIKLGL 106 (235)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 5555554
No 355
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=38.56 E-value=88 Score=21.01 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=14.6
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEA 55 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~ 55 (118)
+|.++..-|.+.+++++|.+++-.
T Consensus 37 ~~RTi~~Ry~~~k~y~eAidLL~~ 60 (336)
T 3lpz_A 37 ETRLVAARYSKQGNWAAAVDILAS 60 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHH
Confidence 345556666666777776665544
No 356
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=37.71 E-value=79 Score=20.20 Aligned_cols=13 Identities=8% Similarity=0.391 Sum_probs=5.3
Q ss_pred HhcCCHHHHHHHh
Q 046694 10 TRTGRIDLANKIF 22 (118)
Q Consensus 10 ~~~~~~~~a~~~~ 22 (118)
++.|+.+.+..++
T Consensus 247 ~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 247 VEKKHLGLVQRLL 259 (337)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHhhhhHHHHHHH
Confidence 3344444444443
No 357
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=37.53 E-value=60 Score=23.17 Aligned_cols=88 Identities=2% Similarity=-0.124 Sum_probs=51.3
Q ss_pred CCHhhHHHHHHHHHhcCCHHHHHH-------HHHHH----HHcCCCccHHHHHHHHHHHhcCCChhhH-HHHHHHHhhcC
Q 046694 28 KDSASWITLILGYGMLGELDVAIN-------LFEAM----REDGVEYYPVSHIGVLTACSLGGLVEKG-KKFFDEMQARN 95 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~~~~~~a~~-------~~~~m----~~~~~~p~~~~~~~ll~~~~~~~~~~~a-~~~~~~m~~~g 95 (118)
|....|+..|...+..|++.+++- +|.+. .+....++...|...|+.|... .+..+ ..+.+.+.+..
T Consensus 439 p~~~aYt~~l~~~a~~g~~~~~~aAl~pC~~~Y~~ig~~l~~~~~~~~~~~Y~~WI~~Y~~~-~f~~~v~~~~~~ld~~~ 517 (550)
T 3rm5_A 439 PALRAYSRYFNDVSRRGNWQELVASLTPCLMGYGEALTKMKGKVTAPEGSVYHEWCETYASS-WYREAMDEGEKLLNHIL 517 (550)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTTTTCCCSCTTSHHHHHHHHTTSH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHhCCH-HHHHHHHHHHHHHHHHH
Confidence 356789999988888898877543 22222 2221112344799999999853 34433 33333333333
Q ss_pred CCccHHHHHHHHHHHHHcccc
Q 046694 96 VKPTETHYACMVYLLIKYNQK 116 (118)
Q Consensus 96 ~~~~~~t~~~li~~~~~~g~~ 116 (118)
-..+......+.+.|.++-++
T Consensus 518 ~~~~~~~~~~l~~~F~~a~~l 538 (550)
T 3rm5_A 518 ETYPPEQLDTLVTIYAEVCEL 538 (550)
T ss_dssp TTSCGGGHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHH
Confidence 334555677777777765544
No 358
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=37.48 E-value=42 Score=17.50 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHc-CCCccHHHHHHHHHHHhcCCCh
Q 046694 46 LDVAINLFEAMRED-GVEYYPVSHIGVLTACSLGGLV 81 (118)
Q Consensus 46 ~~~a~~~~~~m~~~-~~~p~~~~~~~ll~~~~~~~~~ 81 (118)
.++|...|.+|..+ +|. ...+|.-.+.....--++
T Consensus 16 ~eea~~~Fk~LL~e~~V~-p~~tWe~~~~~i~~DpRY 51 (82)
T 2dod_A 16 LEARMKQFKDMLLERGVS-AFSTWEKELHKIVFDPRY 51 (82)
T ss_dssp HHHHHHHHHHHHHHTTCC-SSSCHHHHHHHHHTCSGG
T ss_pred HHHHHHHHHHHHHHcCcC-CCCCHHHHHHHHccCCcc
Confidence 57777777777544 443 344555555555443333
No 359
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens}
Probab=37.46 E-value=61 Score=21.16 Aligned_cols=46 Identities=7% Similarity=-0.065 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCC
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNV 96 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~ 96 (118)
++++++.+.|+.|......-++..+++.=-++.+.++++.+...|.
T Consensus 188 ~L~~HL~~~~i~~~~~~~rWfl~lF~~~~p~~~vlRlWD~~~~~~~ 233 (294)
T 3qwl_A 188 RLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSC 233 (294)
T ss_dssp HHHHHHHHTTCGGGSCHHHHHTSTTTTTSCHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCchhHHHHHHHHHhccCCCHHHHHHHHHHHHhCCc
Confidence 3555666667654433325555666666667777777777766443
No 360
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=37.31 E-value=55 Score=18.31 Aligned_cols=20 Identities=5% Similarity=0.064 Sum_probs=12.1
Q ss_pred HHHHHhcCCHHHHHHHhhhC
Q 046694 6 LDFYTRTGRIDLANKIFDRL 25 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m 25 (118)
+...++.|+.+.+..+++.-
T Consensus 7 L~~A~~~g~~~~v~~ll~~~ 26 (167)
T 3v31_A 7 VHQLAAQGEMLYLATRIEQE 26 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHCCCHHHHHHHHHcC
Confidence 34445667777666666543
No 361
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=36.84 E-value=1.3e+02 Score=22.61 Aligned_cols=62 Identities=13% Similarity=0.003 Sum_probs=46.0
Q ss_pred CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC---------ChhhHHHHHHHH
Q 046694 28 KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG---------LVEKGKKFFDEM 91 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~---------~~~~a~~~~~~m 91 (118)
....-|..+-...-+.+.+++|.+.|+..... +.+...+.-+|+.|.+.+ +.+....+.-++
T Consensus 611 ks~lEWEiLGlla~RL~h~~EA~~a~~~~l~~--RFs~ka~~kLLeiY~~~~~~~~~~~~~d~~~il~~~ikl 681 (754)
T 4gns_B 611 HSGLEWELLGLIMLRTWHWEDAVACLRTSIVA--RFDPVSCQQLLKIYLQPPKNIQEVTLLDTDTIISLLIKK 681 (754)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHSS--SCCHHHHHHHHHHHHSCCSSSCSCCSSCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHH
Confidence 36667888888778888888888888888764 578888888888888766 555555554444
No 362
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=36.73 E-value=56 Score=18.24 Aligned_cols=34 Identities=3% Similarity=-0.154 Sum_probs=23.9
Q ss_pred ccHHHHHHHHHHHhcCC---ChhhHHHHHHHHhhcCC
Q 046694 63 YYPVSHIGVLTACSLGG---LVEKGKKFFDEMQARNV 96 (118)
Q Consensus 63 p~~~~~~~ll~~~~~~~---~~~~a~~~~~~m~~~g~ 96 (118)
|+..+=.-+++.+.+.+ .-++|..+-..|.+.|+
T Consensus 35 ~~cF~GsdlVdWL~~~~~~~sR~eAv~lgq~Ll~~G~ 71 (120)
T 1v3f_A 35 KKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENF 71 (120)
T ss_dssp SSCEEHHHHHHHHHHTTSCSSHHHHHHHHHHHHHHTS
T ss_pred cceeehHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCC
Confidence 55566666777777655 44678888888888775
No 363
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=36.11 E-value=77 Score=19.60 Aligned_cols=80 Identities=21% Similarity=0.184 Sum_probs=55.4
Q ss_pred HhcCCHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcc-----------------HHHHHHHH
Q 046694 10 TRTGRIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYY-----------------PVSHIGVL 72 (118)
Q Consensus 10 ~~~~~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~-----------------~~~~~~ll 72 (118)
.-.|.+.++.-++.....-...-|..+ .|-+..+...|+..+..+....+.-| ..-|+.+-
T Consensus 44 yyngEY~R~Lf~L~~lNT~Ts~YYk~L--Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a 121 (242)
T 3kae_A 44 YLNGEYTRALFHLHKLNTCTSKYYESL--CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLG 121 (242)
T ss_dssp HHTTCHHHHHHHHHTCCBHHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHH
T ss_pred hhcchHhHHHHHHHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHH
Confidence 345666666666655543333333333 45567899999999999987666522 24577778
Q ss_pred HHHhcCCChhhHHHHHHHH
Q 046694 73 TACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~m 91 (118)
..|-..|+.++|++.+..=
T Consensus 122 ~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 122 DLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHhhhHhhhh
Confidence 8888999999999988753
No 364
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=36.05 E-value=41 Score=18.18 Aligned_cols=23 Identities=13% Similarity=0.121 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHcCCCccHHHH
Q 046694 46 LDVAINLFEAMREDGVEYYPVSH 68 (118)
Q Consensus 46 ~~~a~~~~~~m~~~~~~p~~~~~ 68 (118)
.+...+..++++.+|+.||..-+
T Consensus 19 l~~ieekinELk~dG~ePDIiL~ 41 (103)
T 2pk8_A 19 LGEIEEKMNELKMDGFNPDIILF 41 (103)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEE
Confidence 34555667788899999997544
No 365
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=35.61 E-value=26 Score=22.64 Aligned_cols=27 Identities=7% Similarity=0.049 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
..-|.+++.|...|++..|.++|+++.
T Consensus 35 ~~~n~l~R~FL~~gkl~AAr~l~~rlp 61 (270)
T 3cqc_A 35 KQGNAIMRKFLASKKHEAAKEVFVKIP 61 (270)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHCC
Confidence 345789999999999999999999764
No 366
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=34.46 E-value=94 Score=20.10 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=54.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGL 80 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~ 80 (118)
+.|..-+..|+.+-+..+++.-.. .|..-++.|. ..+..|..+-+..++ +.|..++...-...+...+..|+
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll----~~g~~~~~~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALH-LACKFGCVDTAKYLA----SVGEVHSLWHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH-HHHHHCCHHHHHHHH----HHCCCCCCBTTBCHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHH-HHHHcCCHHHHHHHH----HCCCCccccCCCCHHHHHHHcCC
Confidence 446666788999999888876432 2333344444 444567765554444 44444443222334555567789
Q ss_pred hhhHHHHHHHHhhcCCCcc
Q 046694 81 VEKGKKFFDEMQARNVKPT 99 (118)
Q Consensus 81 ~~~a~~~~~~m~~~g~~~~ 99 (118)
.+.+..+++.-.+.|..|+
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~ 115 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPE 115 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHhccccCCCHH
Confidence 8888888887555454443
No 367
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=34.11 E-value=89 Score=19.75 Aligned_cols=20 Identities=20% Similarity=0.162 Sum_probs=13.0
Q ss_pred HHHHHhcCCHHHHHHHhhhC
Q 046694 6 LDFYTRTGRIDLANKIFDRL 25 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m 25 (118)
|...++.|+.+....++.+.
T Consensus 28 L~~A~~~g~~~~v~~ll~~~ 47 (351)
T 3utm_A 28 LLEAARSGNEEKLMALLTPL 47 (351)
T ss_dssp HHHHHHHTCHHHHHHHCCTT
T ss_pred HHHHHHcCCHHHHHHHHHhc
Confidence 44455677777777777653
No 368
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=33.64 E-value=40 Score=18.74 Aligned_cols=24 Identities=8% Similarity=0.113 Sum_probs=16.5
Q ss_pred chHHHHHHHhcCCHHHHHHHhhhC
Q 046694 2 IEPRLDFYTRTGRIDLANKIFDRL 25 (118)
Q Consensus 2 ~~~ll~~~~~~~~~~~a~~~~~~m 25 (118)
+...+..-++.|+.+.+..+++.-
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~ 28 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNN 28 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCC
Confidence 345566667778888888887643
No 369
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=31.72 E-value=1e+02 Score=19.58 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHcCCCccHH-------HHHHHHHHHhcCCChhhHHHHHHHHhhc
Q 046694 46 LDVAINLFEAMREDGVEYYPV-------SHIGVLTACSLGGLVEKGKKFFDEMQAR 94 (118)
Q Consensus 46 ~~~a~~~~~~m~~~~~~p~~~-------~~~~ll~~~~~~~~~~~a~~~~~~m~~~ 94 (118)
++.|+.+|+.+...--.++.. .--..+-.|.+.|.+++|.+++++....
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~ 143 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSK 143 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC
Confidence 789999999997664222221 2234567788999999999999998553
No 370
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=31.65 E-value=83 Score=18.65 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=30.5
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCCccHHH--HHHHHHHHhcCCChhhHHHHHHHHhhcCCC
Q 046694 40 YGMLGELDVAINLFEAMREDGVEYYPVS--HIGVLTACSLGGLVEKGKKFFDEMQARNVK 97 (118)
Q Consensus 40 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~--~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~ 97 (118)
.+..|..+-+ +.+.+.|..++... -...+...+..|+.+.+..+++.+.+.|..
T Consensus 128 A~~~~~~~~v----~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 128 AACVGSEEIV----RLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp HHHHTCHHHH----HHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHcCCHHHH----HHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 3445555433 33444555544321 123455556778888887777777776653
No 371
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=30.84 E-value=1.2e+02 Score=20.11 Aligned_cols=24 Identities=21% Similarity=0.165 Sum_probs=14.5
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHH
Q 046694 32 SWITLILGYGMLGELDVAINLFEA 55 (118)
Q Consensus 32 ~~~~li~~~~~~~~~~~a~~~~~~ 55 (118)
.|.++..-|.+.+++++|.+++..
T Consensus 35 ~~Rtl~~Ry~~~~~~~eAidlL~~ 58 (312)
T 2wpv_A 35 TLRTIANRYVRSKSYEHAIELISQ 58 (312)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH
Confidence 445566666666666666666544
No 372
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=30.11 E-value=85 Score=18.25 Aligned_cols=76 Identities=5% Similarity=0.031 Sum_probs=36.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHHHHHc
Q 046694 34 ITLILGYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKKFFDEMQARNVKPTETHYACMVYLLIKY 113 (118)
Q Consensus 34 ~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~~~ 113 (118)
...+......|. -...+-.++...||.++. ....+..+-. ...+.|.++.++-......++.....-++..+.+.
T Consensus 69 ~~~v~~~~~~g~--G~~~I~~eL~~KGI~~~~--i~~al~~~~~-d~~~~a~~l~~kk~~~~~~~~~~~~~K~~~~L~rr 143 (159)
T 3c1d_A 69 ARFIASRSRKGY--GPARIRQELNQKGISREA--TEKAMREADI-DWAALARDQATRKYGEPLPTVFSEKVKIQRFLLYR 143 (159)
T ss_dssp HHHHHHHHHTTC--CHHHHHHHHHHTTCCHHH--HHHHHHHHCC-CHHHHHHHHHHHHHCSSCCCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCc--cHHHHHHHHHHcCCCHHH--HHHHHHHcCH-hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 344444444331 234566677777775433 2223333222 23444555554332211233455666777777766
Q ss_pred c
Q 046694 114 N 114 (118)
Q Consensus 114 g 114 (118)
|
T Consensus 144 G 144 (159)
T 3c1d_A 144 G 144 (159)
T ss_dssp T
T ss_pred C
Confidence 6
No 373
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=30.04 E-value=81 Score=20.73 Aligned_cols=57 Identities=7% Similarity=-0.049 Sum_probs=29.9
Q ss_pred CHhhHHHHHHHHHhc---CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCChhhHHH
Q 046694 29 DSASWITLILGYGML---GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLVEKGKK 86 (118)
Q Consensus 29 ~~~~~~~li~~~~~~---~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~ 86 (118)
+..++..+| .+... ..+......+.++--.--.|-..+|-.++.++-+.|+.....+
T Consensus 208 ~~~~~~~~~-~l~~~~~~~n~~~i~~~L~k~h~~~~~~~~~~~d~l~~~~~~~gd~~lv~~ 267 (290)
T 1e5r_A 208 TAEHRRRIL-SLGQVIERENFRDILFLLSKVHYKYDVHPSETYDWLIEISKQAGDEKMVVK 267 (290)
T ss_dssp CHHHHHHHH-GGGGTCCTTTHHHHHHHHHHHHHHEESCTTHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHH-HHhccchhhhHHHHHHHHHHhhhhccCChHHHHHHHHHHHHhcCChHHHHH
Confidence 555666666 33322 2344555555555321113455666666666666666655444
No 374
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=29.22 E-value=96 Score=18.59 Aligned_cols=86 Identities=6% Similarity=-0.089 Sum_probs=58.8
Q ss_pred HHHHHhcCCHHHHHHHhhhCC-----CCCH-------hhHHHHHHHHHhcCCHHHHHHHHHHHHHc--CC----------
Q 046694 6 LDFYTRTGRIDLANKIFDRLP-----VKDS-------ASWITLILGYGMLGELDVAINLFEAMRED--GV---------- 61 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~-----~~~~-------~~~~~li~~~~~~~~~~~a~~~~~~m~~~--~~---------- 61 (118)
+..+...|.++.|+-+.+.+. .|++ .+...+-+++...+.+..|...|++..+. .+
T Consensus 27 ik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 27 VRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 556677888888887777643 2332 25566678888999999999999995321 11
Q ss_pred ------------CccHHHHHHHHHHHhcCCChhhHHHHHHHH
Q 046694 62 ------------EYYPVSHIGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 62 ------------~p~~~~~~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
.++...---+-.++.+.++.+.|..+++.+
T Consensus 107 ~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 107 GNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred cccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 011122233677888999999999988776
No 375
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=28.89 E-value=1.3e+02 Score=19.93 Aligned_cols=78 Identities=10% Similarity=-0.066 Sum_probs=42.2
Q ss_pred HHHhcCCHHHHHHH----HHHHHHcCCCccHHHHHHHHHHHhcCCChh-hHHHHHHHHh----hcCC--CccHHHHHHHH
Q 046694 39 GYGMLGELDVAINL----FEAMREDGVEYYPVSHIGVLTACSLGGLVE-KGKKFFDEMQ----ARNV--KPTETHYACMV 107 (118)
Q Consensus 39 ~~~~~~~~~~a~~~----~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~-~a~~~~~~m~----~~g~--~~~~~t~~~li 107 (118)
.+.++|+...|-++ .+-..+.+++++......+++.+.....-+ .-.++.+++. +.|- .-++.....+-
T Consensus 62 ~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a 141 (312)
T 2wpv_A 62 SFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIG 141 (312)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHH
T ss_pred HHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH
Confidence 34556776665554 444456788888888888877776543211 2233444442 2221 12455555555
Q ss_pred HHHHHcccc
Q 046694 108 YLLIKYNQK 116 (118)
Q Consensus 108 ~~~~~~g~~ 116 (118)
..|.+.|++
T Consensus 142 ~~~~~e~~~ 150 (312)
T 2wpv_A 142 SKLLEGDFV 150 (312)
T ss_dssp HHHHHTTCH
T ss_pred HHHhhcCCH
Confidence 555555443
No 376
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=28.54 E-value=1.8e+02 Score=21.43 Aligned_cols=70 Identities=9% Similarity=0.031 Sum_probs=46.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC-----Chhh----HHHHHHHHhhcCCCccHH---HHHHHHHHH
Q 046694 43 LGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG-----LVEK----GKKFFDEMQARNVKPTET---HYACMVYLL 110 (118)
Q Consensus 43 ~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~-----~~~~----a~~~~~~m~~~g~~~~~~---t~~~li~~~ 110 (118)
.=..++.+.++++++...-+-+...|.+++......- -+.+ .-.+|..|.+.++.+... .+..+++++
T Consensus 462 eisI~~iV~~L~~~K~S~~~rdqdvFaCMIh~LFdEyrff~~YP~~eL~iTA~LFG~LI~~~Ll~~~~L~iALr~ILeAl 541 (603)
T 4b8b_A 462 ELAIKDVIELLRRLRDSDLPRDQEVFTCITHAVIAESTFFQDYPLDALATTSVLFGSMILFQLLRGFVLDVAFRIIMRFA 541 (603)
T ss_dssp SSCHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHGGGGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcccCcchHHHHHHHHHHHH
Confidence 3358888999999887765568889999888876431 1222 447788888888775433 234555555
Q ss_pred HH
Q 046694 111 IK 112 (118)
Q Consensus 111 ~~ 112 (118)
.+
T Consensus 542 rk 543 (603)
T 4b8b_A 542 KE 543 (603)
T ss_dssp TS
T ss_pred hC
Confidence 43
No 377
>3a54_A Protein-glutaminase; mutant structure like A substrate-enzyme complex, hydrolase; 1.50A {Chryseobacterium proteolyticum} PDB: 3a55_A 3a56_A*
Probab=28.26 E-value=1.2e+02 Score=19.81 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=24.7
Q ss_pred CCHhhHHHHHHHHHhc-------------------CCHHHHHHHHHHHHHcCCCcc
Q 046694 28 KDSASWITLILGYGML-------------------GELDVAINLFEAMREDGVEYY 64 (118)
Q Consensus 28 ~~~~~~~~li~~~~~~-------------------~~~~~a~~~~~~m~~~~~~p~ 64 (118)
|++.+++.|...+... |....|..+-..+.+.|+.|+
T Consensus 120 P~~~T~~~Lf~~i~n~rd~r~~asq~~I~F~YpdDGCyARAHLM~~~l~~~Gi~p~ 175 (305)
T 3a54_A 120 PDVATLNSLFNQIKNQSCGTSTASSPCITFRYPVDGCYARAHKMRQILMNNGYDCE 175 (305)
T ss_dssp SCHHHHHHHHHHHHTTBTTSTTCCSSCBCTTCTTSCHHHHHHHHHHHHHHTTBCCE
T ss_pred CchhhHHHHHHHHhhhhcchhhccCCCccccCCcccHHHHHHHHHHHHHHcCCChh
Confidence 5788888888776554 345666666666666666654
No 378
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31
Probab=27.71 E-value=79 Score=17.13 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=33.6
Q ss_pred HHHHHHHHHHH--cCCC-----------ccHHHHHHHHHHHhcCC----ChhhHHHHHHHHhhcCC
Q 046694 48 VAINLFEAMRE--DGVE-----------YYPVSHIGVLTACSLGG----LVEKGKKFFDEMQARNV 96 (118)
Q Consensus 48 ~a~~~~~~m~~--~~~~-----------p~~~~~~~ll~~~~~~~----~~~~a~~~~~~m~~~g~ 96 (118)
+...+++.|.. .|++ |+..+=.-+++.+.+.. +-++|..+-..|.+.|+
T Consensus 20 ~l~~iv~~M~~p~~Gv~i~dr~~~~~~~~~~F~G~dlVdWL~~~~~~~~~r~eAv~lg~~Ll~~G~ 85 (105)
T 1fsh_A 20 DMSAIVRVMQLPDSGLEIRDRMWLKITIANAVIGADVVDWLYTHVEGFKERREARKYASSMLKHGF 85 (105)
T ss_dssp CHHHHHHHHHSTTSSSCSSCEEETTEEESSCCHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHhCCCCCceeEEeEeCCEECCceeEcHHHHHHHHHhCcCCCCHHHHHHHHHHHHHCCc
Confidence 34556666652 3442 56666667777777654 45889999999999886
No 379
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=27.28 E-value=59 Score=15.55 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=19.8
Q ss_pred HHHHHHHHcCCCccHHHHHHHHHHHhcCCC--hhhHHHHHHHH
Q 046694 51 NLFEAMREDGVEYYPVSHIGVLTACSLGGL--VEKGKKFFDEM 91 (118)
Q Consensus 51 ~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~--~~~a~~~~~~m 91 (118)
+.++.+.+.|+.+.. ...+..+.|. ++.|.+.+.+|
T Consensus 11 qmlq~L~eMGFd~er-----ae~Alk~Tg~~Gle~AmewL~k~ 48 (54)
T 2cos_A 11 QMLQELVNAGCDQEM-----AGRALKQTGSRSIEAALEYISKM 48 (54)
T ss_dssp HHHHHHHHHHCCHHH-----HHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHH-----HHHHHHHhCcccHHHHHHHHHHh
Confidence 345555666665532 2233344444 77777777766
No 380
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=26.71 E-value=2e+02 Score=21.36 Aligned_cols=89 Identities=9% Similarity=-0.008 Sum_probs=51.9
Q ss_pred HHHhcCCHHHHHHHhhhCCCCCH--hhHHHHHHHHHhc----------------CCHHHHHHHHHHHHHc-----CCCc-
Q 046694 8 FYTRTGRIDLANKIFDRLPVKDS--ASWITLILGYGML----------------GELDVAINLFEAMRED-----GVEY- 63 (118)
Q Consensus 8 ~~~~~~~~~~a~~~~~~m~~~~~--~~~~~li~~~~~~----------------~~~~~a~~~~~~m~~~-----~~~p- 63 (118)
-+...|++++|+.+|+-....|. ...|.++.-.... +-...|.++.+..... .+.+
T Consensus 452 ~ae~~G~~~dAi~LY~La~~~d~vl~lln~~Ls~~l~~~~~~~~~~~~~~~~~~~l~~la~~i~~~y~~~~~~~~~~~~~ 531 (661)
T 2qx5_A 452 RADEDGRIYDSILLYQLAEEYDIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIYFDNAGISRQIHVK 531 (661)
T ss_dssp HHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTSCSSCSSCCTTTCHHHHHHHHHHHHTTCHHHHTTSCHH
T ss_pred HHHHCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHhcCchhhhhccHH
Confidence 34567889999988887665432 2444444333321 1234555555554433 3333
Q ss_pred cHHHHHHHHHHH-----hcCCChhhHHHHHHHHhhcCCCcc
Q 046694 64 YPVSHIGVLTAC-----SLGGLVEKGKKFFDEMQARNVKPT 99 (118)
Q Consensus 64 ~~~~~~~ll~~~-----~~~~~~~~a~~~~~~m~~~g~~~~ 99 (118)
+..|+..|++.. .+.|+++.|.+.++++ ++.|.
T Consensus 532 ~~~t~~lLl~l~~f~~~~~~g~~~~AL~~i~~L---~llPl 569 (661)
T 2qx5_A 532 NKEICMLLLNISSIRELYFNKQWQETLSQMELL---DLLPF 569 (661)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHT---SCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHhC---CCCCC
Confidence 556777765543 5889999998777765 45553
No 381
>4ewi_A Nacht, LRR and PYD domains-containing protein 4; NLR proteins, death domain, pyrin domain, NLRP4, ASC, innate system, inflammasome, apoptosis; 2.28A {Homo sapiens}
Probab=26.59 E-value=29 Score=19.29 Aligned_cols=29 Identities=10% Similarity=-0.129 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHhh
Q 046694 65 PVSHIGVLTACSLGGLVEKGKKFFDEMQA 93 (118)
Q Consensus 65 ~~~~~~ll~~~~~~~~~~~a~~~~~~m~~ 93 (118)
...+...++.+-+.+.-+.+.++-+++..
T Consensus 68 ~~A~~vtl~if~~mn~~dL~e~~~~e~~~ 96 (113)
T 4ewi_A 68 QQAWNITLRIFQKMDRKDLCMKVMRERTG 96 (113)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 34455555555555666666666666543
No 382
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=26.52 E-value=86 Score=17.17 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=42.7
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHH---HHHHHHHHHh
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV---SHIGVLTACS 76 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~---~~~~ll~~~~ 76 (118)
..+...++.|+.+.+..+++.-. ..+..-++.+.. +..|+.+.+..++ +.|..++.. -.+ .+...+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t-~L~~A~ 76 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV--MMFGSTAIALELL----KQGASPNVQDTSGTS-PVHDAA 76 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH--SCTTCHHHHHHHH----HTTCCTTCCCTTSCC-HHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH--HHcCCHHHHHHHH----HCCCCCCCcCCCCCC-HHHHHH
Confidence 34566678899999998888721 123333444444 6677766554444 445544322 222 334445
Q ss_pred cCCChhhHHHHH
Q 046694 77 LGGLVEKGKKFF 88 (118)
Q Consensus 77 ~~~~~~~a~~~~ 88 (118)
..|+.+.+..++
T Consensus 77 ~~~~~~~v~~Ll 88 (156)
T 1bd8_A 77 RTGFLDTLKVLV 88 (156)
T ss_dssp HTTCHHHHHHHH
T ss_pred HcCcHHHHHHHH
Confidence 556665444443
No 383
>1nnv_A Hypothetical protein HI1450; structure 2 function project, S2F, structural genomics, unknown function; NMR {Haemophilus influenzae} SCOP: d.17.7.1
Probab=26.51 E-value=50 Score=18.27 Aligned_cols=26 Identities=15% Similarity=0.186 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCCc-cHHHHHHH
Q 046694 46 LDVAINLFEAMREDGVEY-YPVSHIGV 71 (118)
Q Consensus 46 ~~~a~~~~~~m~~~~~~p-~~~~~~~l 71 (118)
.+.|..+|=+|-..++.| |...||.-
T Consensus 17 id~AYDiFLE~A~dNL~paDillFnlq 43 (110)
T 1nnv_A 17 IDIAYDIFLEMAGENLDPADILLFNLQ 43 (110)
T ss_dssp HHHHHHHHHHHCSTTSCHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhhcCCHHHHHHHHHh
Confidence 567888888888777777 56666653
No 384
>2hm2_Q ASC2, pyrin-only protein 1, PAAD-only; pyrin domain, six helix bundle, apoptosis; NMR {Homo sapiens}
Probab=26.19 E-value=31 Score=18.13 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
..-+.|+..|....-++.++.+|++|.
T Consensus 51 dla~lLv~~y~~~~A~~vt~~if~~mn 77 (89)
T 2hm2_Q 51 DLTDKLVASYYEDYAAELVVAVLRDMR 77 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHcC
Confidence 355566777777777888888888774
No 385
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.87 E-value=1.1e+02 Score=18.86 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=29.2
Q ss_pred HHHhcCCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCC
Q 046694 39 GYGMLGELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGG 79 (118)
Q Consensus 39 ~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 79 (118)
.....++-+.+.+++++..+.|..|....-..++.+.-+.|
T Consensus 11 ~al~~~d~~~~~~~~~~al~~g~~~~~ii~~~l~p~m~~VG 51 (215)
T 3ezx_A 11 DAIVNQNVAGTPELCKEALAAGVPALDIITKGLSVGMKIVG 51 (215)
T ss_dssp HHHHTTCTTHHHHHHHHHHHTTCCHHHHHHHTHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 34456788888888888888887776666666777655544
No 386
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=25.58 E-value=1.7e+02 Score=22.88 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=0.0
Q ss_pred HHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 15 IDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 15 ~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
++-+.++|.+++.|+ |..+++...+.++.+.+.++|..+.
T Consensus 218 Lr~l~~Iy~k~~~~d---y~~a~~~ai~LnD~~li~~if~~l~ 257 (963)
T 4ady_A 218 LRKSFDFLMNMPNCD---YLTLNKVVVNLNDAGLALQLFKKLK 257 (963)
T ss_dssp HHHHHHHHHHSSSCC---HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchh---HHHHHHHHHHcCCHHHHHHHHHHHH
No 387
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=25.34 E-value=85 Score=16.70 Aligned_cols=30 Identities=10% Similarity=-0.045 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 47 DVAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 47 ~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
.-|.++|.++++.+..|+...+-++..+..
T Consensus 34 ~Ga~~ay~rL~~~~~~~c~~~L~aL~gAi~ 63 (93)
T 3bqs_A 34 VGSKEAFLRIWENDSSVCMSELYALEGAVQ 63 (93)
T ss_dssp HHHHHHHHHHHTTCTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 457888999988888898887777755543
No 388
>3ctd_A Putative ATPase, AAA family; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Prochlorococcus marinus subsp} SCOP: a.80.1.2
Probab=25.22 E-value=1.3e+02 Score=18.83 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=47.2
Q ss_pred CHhhHHHHHHHHHhc---CCHHHHHHHHHHHHHcCCCccHHHHHHHHHHHhcCCCh-----hhHHHHHHHHhhcCC
Q 046694 29 DSASWITLILGYGML---GELDVAINLFEAMREDGVEYYPVSHIGVLTACSLGGLV-----EKGKKFFDEMQARNV 96 (118)
Q Consensus 29 ~~~~~~~li~~~~~~---~~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~-----~~a~~~~~~m~~~g~ 96 (118)
+-..+-.+|+++.|+ .+++.|+-.+-+|.+.|-.|....=..++-+.-.-|.. ..|...++.....|.
T Consensus 31 ~Gd~HYd~ISAf~KSiRGSDpDAALywLaRMl~~GEDp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~ 106 (213)
T 3ctd_A 31 NGQNHFDVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLADPNAIVVVQSCCDAFDRVGF 106 (213)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHHHHHHCT
T ss_pred CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhCC
Confidence 334555678888877 78999999999999999877766666666666665543 345556666666665
No 389
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=25.05 E-value=1.3e+02 Score=18.64 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHH---HHHHHHHHHhc
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPV---SHIGVLTACSL 77 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~---~~~~ll~~~~~ 77 (118)
+.+..-+..|+.+.+..+++.-.. .|..-++.+. ..+..|+.+-+..+ .+.|..++.. -++ .+...+.
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~-~A~~~g~~~~v~~L----l~~ga~~~~~~~~g~t-pL~~A~~ 115 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALH-QACIDDNVDMVKFL----VENGANINQPDNEGWI-PLHAAAS 115 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHH-HHHHTTCHHHHHHH----HHTTCCTTCCCTTSCC-HHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH-HHHHcCCHHHHHHH----HHCCCCCCCCCCCCCc-HHHHHHH
Confidence 456666788999999888876542 2333334444 34456776644444 4455554332 222 2334455
Q ss_pred CCChhhHHHHH
Q 046694 78 GGLVEKGKKFF 88 (118)
Q Consensus 78 ~~~~~~a~~~~ 88 (118)
.|+.+.+..++
T Consensus 116 ~g~~~~v~~Ll 126 (299)
T 1s70_B 116 CGYLDIAEYLI 126 (299)
T ss_dssp HTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 56665444443
No 390
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=24.99 E-value=87 Score=16.69 Aligned_cols=29 Identities=10% Similarity=-0.013 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHh
Q 046694 48 VAINLFEAMREDGVEYYPVSHIGVLTACS 76 (118)
Q Consensus 48 ~a~~~~~~m~~~~~~p~~~~~~~ll~~~~ 76 (118)
-|.+.|.++++.|..|+...+-++..+..
T Consensus 35 Ga~~ay~rLk~~~~~~~~~~L~aL~gAi~ 63 (93)
T 3mab_A 35 GSKEAFLRIWENDSSVCMSELYALEGAVQ 63 (93)
T ss_dssp CHHHHHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHHc
Confidence 36778888888888888888777776654
No 391
>3bge_A Predicted ATPase; structural genomics, predicted AAA+ATPase C-terminal fragmen protein structure initiative; 1.85A {Haemophilus influenzae} SCOP: a.80.1.2
Probab=24.66 E-value=1.3e+02 Score=18.64 Aligned_cols=34 Identities=6% Similarity=0.067 Sum_probs=23.7
Q ss_pred hcCCChhhHHHHHHHHhhcCCCccHHHHHHHHHH
Q 046694 76 SLGGLVEKGKKFFDEMQARNVKPTETHYACMVYL 109 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~ 109 (118)
.+..++|.|.-.+.+|.+.|..|....=..++-+
T Consensus 18 iRGSDpDAAly~LaRMl~~GEDp~~IaRRLvi~A 51 (201)
T 3bge_A 18 VRGSAPDAALYWYARILTAGGDPLYVARRLLAIA 51 (201)
T ss_dssp HHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4567889999999999888876654444444433
No 392
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=24.60 E-value=1.3e+02 Score=18.67 Aligned_cols=25 Identities=8% Similarity=0.141 Sum_probs=17.8
Q ss_pred hcCCChhhHHHHHHHHhhcCCCccHH
Q 046694 76 SLGGLVEKGKKFFDEMQARNVKPTET 101 (118)
Q Consensus 76 ~~~~~~~~a~~~~~~m~~~g~~~~~~ 101 (118)
.+..+++.|.-.+.+|.+.| .|...
T Consensus 25 iRGSDpDAAly~LaRml~~G-Dp~~I 49 (204)
T 2r9g_A 25 IRGSDVDAALHYLARLVEAG-DLASI 49 (204)
T ss_dssp HHTTCHHHHHHHHHHHHHHT-CHHHH
T ss_pred HhcCCHHHHHHHHHHHHHcC-CHHHH
Confidence 45578888888888888888 54433
No 393
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=23.94 E-value=93 Score=16.69 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=45.2
Q ss_pred HHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH--HHHHHHHHhcCC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS--HIGVLTACSLGG 79 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~--~~~ll~~~~~~~ 79 (118)
.+..-++.|+.+.+..+.+.-.. .|..-++.+..+ +..|+.+.+. .+.+.|..++... -...+...+..|
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A-~~~~~~~~v~----~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 17 KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLA-TAHGHLEIVE----VLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH-HHHTCHHHHH----HHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH-HHcCCHHHHH----HHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 45566788999988888876432 233344444444 3556655444 4444555543321 112334445567
Q ss_pred ChhhHHHHHHHHhhcCCCc
Q 046694 80 LVEKGKKFFDEMQARNVKP 98 (118)
Q Consensus 80 ~~~~a~~~~~~m~~~g~~~ 98 (118)
+.+.+..++ +.|..+
T Consensus 92 ~~~~v~~Ll----~~g~~~ 106 (136)
T 2jab_A 92 HLEIAEVLL----KHGADV 106 (136)
T ss_dssp CHHHHHHHH----HTTCCT
T ss_pred CHHHHHHHH----HcCCCC
Confidence 766544444 445443
No 394
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=23.70 E-value=54 Score=18.14 Aligned_cols=17 Identities=12% Similarity=0.438 Sum_probs=11.9
Q ss_pred HHhcCCHHHHHHHhhhC
Q 046694 9 YTRTGRIDLANKIFDRL 25 (118)
Q Consensus 9 ~~~~~~~~~a~~~~~~m 25 (118)
.++.|++++|..++++-
T Consensus 32 ~Ak~gdfe~A~~~l~eA 48 (109)
T 3k1s_A 32 FAKQGKMAEADEAMVKA 48 (109)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHH
Confidence 35678888888777643
No 395
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=23.35 E-value=1e+02 Score=16.89 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=12.5
Q ss_pred HHHHHHhcCCHHHHHHHhhhC
Q 046694 5 RLDFYTRTGRIDLANKIFDRL 25 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m 25 (118)
.+..-++.|+.+.+..+++.-
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~g 25 (153)
T 1awc_B 5 KLLEAARAGQDDEVRILMANG 25 (153)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcC
Confidence 344455666766666666643
No 396
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=23.18 E-value=45 Score=18.08 Aligned_cols=85 Identities=11% Similarity=0.079 Sum_probs=46.5
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHHH---HHHHHHHhc
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVSH---IGVLTACSL 77 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~---~~ll~~~~~ 77 (118)
+.+..-++.|+.+-+..+++.-.. +|..-++.+..+.. |..+.+..+++ .|..++.... ...+...+.
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM--GSAQVAELLLL----HGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT--SCHHHHHHHHH----HTCCSSCCBTTTTBCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc--CCHHHHHHHHH----CCCCCCCcCCCCCCCHHHHHHH
Confidence 446666788999988888876432 23334444544443 77765555544 4544443221 233444455
Q ss_pred CCChhhHHHHHHHHhhcCCCc
Q 046694 78 GGLVEKGKKFFDEMQARNVKP 98 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~ 98 (118)
.|+.+.+..+ .+.|..+
T Consensus 88 ~~~~~~v~~L----l~~ga~~ 104 (136)
T 1d9s_A 88 EGFLDTLVVL----HRAGARL 104 (136)
T ss_dssp HTCHHHHHHH----HHTCCCC
T ss_pred cCCHHHHHHH----HHcCCCC
Confidence 6766554444 4455443
No 397
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=23.14 E-value=1.7e+02 Score=19.54 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=52.0
Q ss_pred HHHHHhcCCHHHHHHHhhhCC------CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-----CccHHHHHHHHHH
Q 046694 6 LDFYTRTGRIDLANKIFDRLP------VKDSASWITLILGYGMLGELDVAINLFEAMREDGV-----EYYPVSHIGVLTA 74 (118)
Q Consensus 6 l~~~~~~~~~~~a~~~~~~m~------~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~-----~p~~~~~~~ll~~ 74 (118)
+..-++.|+.+-+..+++.-. ..+....+.+..+ +..|..+-+.-++ +.|. .++... ...+..
T Consensus 96 Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A-a~~G~~eiv~~Ll----~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 96 CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA-AENGHLHVLNRLC----ELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp HHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH-HHTTCHHHHHHHH----HSCTTTHHHHHSHHH-HHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH-HHcCCHHHHHHHH----hCCCCccccccCCCC-CCHHHH
Confidence 445567788888888887643 2344455544444 5667766555544 4442 222333 344555
Q ss_pred HhcCCChhhHHHHHHHHhhcCCC-----ccHHHHHHHHHHHHHccc
Q 046694 75 CSLGGLVEKGKKFFDEMQARNVK-----PTETHYACMVYLLIKYNQ 115 (118)
Q Consensus 75 ~~~~~~~~~a~~~~~~m~~~g~~-----~~~~t~~~li~~~~~~g~ 115 (118)
.+..|..+.+..++ +.|.. .|..-.+.|..+.++.|+
T Consensus 170 Aa~~G~~eiv~~Ll----~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 170 AAENGHLHVLNRLC----ELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp HHHTTCHHHHHHHH----HSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHHCCCHHHHHHHH----HcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 56778876555444 45554 233334455444324443
No 398
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=23.10 E-value=1.1e+02 Score=19.15 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=27.3
Q ss_pred HHHHHHhcCCHHHHHHHhhhCC----CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcC
Q 046694 5 RLDFYTRTGRIDLANKIFDRLP----VKDSASWITLILGYGMLGELDVAINLFEAMREDG 60 (118)
Q Consensus 5 ll~~~~~~~~~~~a~~~~~~m~----~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~ 60 (118)
.|..-++.|+.+-+..+++.-. ..+..-++.+..+.........-.++++.+.+.|
T Consensus 114 ~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g 173 (276)
T 4hbd_A 114 ALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG 173 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC
Confidence 3445567788887777776543 2233344444444332222233334444444433
No 399
>1v54_I STA, cytochrome C oxidase polypeptide VIC; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.3.1 PDB: 1oco_I* 1occ_I* 1ocz_I* 1ocr_I* 1v55_I* 2dyr_I* 2dys_I* 2eij_I* 2eik_I* 2eil_I* 2eim_I* 2ein_I* 2occ_I* 2ybb_T* 2zxw_I* 3abk_I* 3abl_I* 3abm_I* 3ag1_I* 3ag2_I* ...
Probab=22.93 E-value=61 Score=16.56 Aligned_cols=14 Identities=36% Similarity=0.636 Sum_probs=10.1
Q ss_pred HHHHHHHHHHcCCC
Q 046694 49 AINLFEAMREDGVE 62 (118)
Q Consensus 49 a~~~~~~m~~~~~~ 62 (118)
+.+-|++|++.|+-
T Consensus 56 ~~k~ferMk~aG~f 69 (73)
T 1v54_I 56 SMKDFEEMRKAGIF 69 (73)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHcccc
Confidence 45668888888763
No 400
>1xqo_A 8-oxoguanine DNA glycosylase; helix-hairpin-helix, archaea, P.aerophilum, PA-AGOG native, DNA repair, lyase; 1.03A {Pyrobaculum aerophilum} SCOP: a.96.1.6 PDB: 1xqp_A*
Probab=22.84 E-value=1.3e+02 Score=19.45 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=21.6
Q ss_pred HHHHHHHHHHH-HHcCCCc---cHHHHHHHHHHHhcCC
Q 046694 46 LDVAINLFEAM-REDGVEY---YPVSHIGVLTACSLGG 79 (118)
Q Consensus 46 ~~~a~~~~~~m-~~~~~~p---~~~~~~~ll~~~~~~~ 79 (118)
.+++.+.|+++ +..|++| |..+| ++..+.+-|
T Consensus 196 ~~~~~~~W~~Var~sgIPplHLDSilW--lig~~~~~~ 231 (256)
T 1xqo_A 196 YEAVQKIWDAVARETGIPPLHLDTLLW--LAGRAVLYG 231 (256)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHH--HHHHHHTTC
T ss_pred hHHHHHHHHHHHHccCCCchhhhHHHH--Hhccccccc
Confidence 35788888888 4568876 55666 666666444
No 401
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=22.68 E-value=93 Score=17.02 Aligned_cols=19 Identities=16% Similarity=0.052 Sum_probs=13.7
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 046694 40 YGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 40 ~~~~~~~~~a~~~~~~m~~ 58 (118)
.++.|++++|.+.+++-.+
T Consensus 30 ~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 30 AAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4567888888888777654
No 402
>1wwp_A Hypothetical protein TTHA0636; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 2.11A {Thermus thermophilus HB8}
Probab=22.51 E-value=1.1e+02 Score=16.82 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=37.8
Q ss_pred CHhhHHHHHHHHHhcCCHHHHHHHHHHHH-H-cCCCccHHHHHHHHHHHhcCCChhhHH--HHHHHHhhcC
Q 046694 29 DSASWITLILGYGMLGELDVAINLFEAMR-E-DGVEYYPVSHIGVLTACSLGGLVEKGK--KFFDEMQARN 95 (118)
Q Consensus 29 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~-~-~~~~p~~~~~~~ll~~~~~~~~~~~a~--~~~~~m~~~g 95 (118)
+......++..+-.. ++.+.++.++.. + .|+. +.++...++...+.|-++... .+.+....++
T Consensus 19 ~~~~~dg~iq~fe~t--~Elawk~~k~~l~~~~g~~--~~s~rd~~r~a~~~glI~~~~~~~w~~m~~~RN 85 (119)
T 1wwp_A 19 SPVERDAAIQRFEYT--FEAFWKALQAYLREKEGLE--GASPKGVIRLAREVGLLRDEEARLALGMVDDRS 85 (119)
T ss_dssp CHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCC--CCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhCCC--CCCHHHHHHHHHHcCCCCchHHHHHHHHHHHhh
Confidence 444444555544332 566666666555 3 3654 778888888888889887664 4444444444
No 403
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=22.47 E-value=95 Score=16.92 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=12.8
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 046694 40 YGMLGELDVAINLFEAMRE 58 (118)
Q Consensus 40 ~~~~~~~~~a~~~~~~m~~ 58 (118)
.++.|++++|.+.+++-.+
T Consensus 28 ~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 28 QAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4566777777777776543
No 404
>3qf2_A Nacht, LRR and PYD domains-containing protein 3; six helix bundle, apoptosis; 1.70A {Homo sapiens}
Probab=22.42 E-value=31 Score=19.02 Aligned_cols=21 Identities=5% Similarity=-0.265 Sum_probs=10.2
Q ss_pred HHHHHHHHHhcCCChhhHHHH
Q 046694 67 SHIGVLTACSLGGLVEKGKKF 87 (118)
Q Consensus 67 ~~~~ll~~~~~~~~~~~a~~~ 87 (118)
.+...++.+-+.+.-+.+.++
T Consensus 65 A~~vt~~if~~mn~~dL~e~l 85 (110)
T 3qf2_A 65 AWAMAVWIFAAINRRDLYEKA 85 (110)
T ss_dssp HHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHH
Confidence 444444444444555555544
No 405
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=22.23 E-value=1.4e+02 Score=18.20 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCC--CCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH---HHHHHHHHhcC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLP--VKDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS---HIGVLTACSLG 78 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~--~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~---~~~ll~~~~~~ 78 (118)
+.+...++.|+.+.+..+++... .+|..-++.|..+ +..|..+-+ +.+.+.|..++... -...+...+..
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A-~~~g~~~~v----~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 47 TPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFV-AGLGSDKCV----RLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHH-HHHTCHHHH----HHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHH-HHCCCHHHH----HHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 44666778899998888887221 2344444455444 455776544 44455566654332 11334444667
Q ss_pred CChhhHHHHHH
Q 046694 79 GLVEKGKKFFD 89 (118)
Q Consensus 79 ~~~~~a~~~~~ 89 (118)
|+.+.+..+++
T Consensus 122 g~~~~v~~Ll~ 132 (244)
T 3ui2_A 122 VRPEVVEALVE 132 (244)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 77765554443
No 406
>2km6_A Nacht, LRR and PYD domains-containing protein 7; NLRP7, pyrin domain, innate immune system, NALP, ATP-binding mutation, leucine-rich repeat; NMR {Homo sapiens}
Probab=22.08 E-value=27 Score=19.16 Aligned_cols=9 Identities=22% Similarity=0.674 Sum_probs=3.2
Q ss_pred HHHHHHHHH
Q 046694 47 DVAINLFEA 55 (118)
Q Consensus 47 ~~a~~~~~~ 55 (118)
+.++.+|++
T Consensus 71 ~vt~~if~~ 79 (106)
T 2km6_A 71 NATVNILEE 79 (106)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 407
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=21.80 E-value=3.3e+02 Score=22.31 Aligned_cols=80 Identities=15% Similarity=0.062 Sum_probs=50.8
Q ss_pred hHHHHHHHHHhcC---------------CHHHHHHHHHHHHHcCCCcc-HHHHHHHHHHHhcCCChhhHHHHHHHHhhcC
Q 046694 32 SWITLILGYGMLG---------------ELDVAINLFEAMREDGVEYY-PVSHIGVLTACSLGGLVEKGKKFFDEMQARN 95 (118)
Q Consensus 32 ~~~~li~~~~~~~---------------~~~~a~~~~~~m~~~~~~p~-~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~g 95 (118)
.=+.||.++++.| ..++..+.|.++.+- +.++ ....-..+..-..++++..|.+++.++.+..
T Consensus 1236 ~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~-~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k 1314 (1354)
T 3lxu_X 1236 QKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKF-VDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEK 1314 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTS-SCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhh-cccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3456777776643 245566666666542 2222 2222222333346799999999999996643
Q ss_pred CCccHHHHHHHHHHHHHcc
Q 046694 96 VKPTETHYACMVYLLIKYN 114 (118)
Q Consensus 96 ~~~~~~t~~~li~~~~~~g 114 (118)
|+...|..++..+...|
T Consensus 1315 --~~~~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1315 --RTRDHFVELAAINGALG 1331 (1354)
T ss_dssp --CCHHHHHHHHHHHHHHS
T ss_pred --ccHHHHHHHHHHHHHcC
Confidence 78889999988887665
No 408
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=21.66 E-value=1.3e+02 Score=17.45 Aligned_cols=11 Identities=18% Similarity=0.452 Sum_probs=4.1
Q ss_pred HHHHHHHHhcC
Q 046694 34 ITLILGYGMLG 44 (118)
Q Consensus 34 ~~li~~~~~~~ 44 (118)
...+.++.+.+
T Consensus 94 ~~a~~aL~~~~ 104 (201)
T 3ltj_A 94 QSAAVALGQIG 104 (201)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 33333333333
No 409
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=21.60 E-value=96 Score=15.96 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=45.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccHHH--HHHHHHHHhcC
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYPVS--HIGVLTACSLG 78 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~--~~~ll~~~~~~ 78 (118)
+.+...++.|+.+-+..+.+.-.. .+...++.+.. .+..|+.+.+. .+.+.|..++... -...+...++.
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-A~~~~~~~~~~----~Ll~~g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL-AARNGHLEVVK----LLLEAGADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHH-HHHHTCHHHHH----HHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHH-HHHcCcHHHHH----HHHHcCCCCcccCCCCCcHHHHHHHc
Confidence 345566778898888888875432 23333334443 34556665444 4444555543221 12234445566
Q ss_pred CChhhHHHHHHHHhhcCCCc
Q 046694 79 GLVEKGKKFFDEMQARNVKP 98 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~ 98 (118)
|+.+.+..+ .+.|..+
T Consensus 79 ~~~~~~~~L----l~~g~~~ 94 (126)
T 1n0r_A 79 GHLEVVKLL----LEAGADV 94 (126)
T ss_dssp TCHHHHHHH----HHTTCCT
T ss_pred ChHHHHHHH----HHcCCCC
Confidence 776554444 4455544
No 410
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.36 E-value=2.1e+02 Score=19.73 Aligned_cols=59 Identities=12% Similarity=0.047 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCc---cHHHHHHHHHHHhcCCChhhHHHHHHHH
Q 046694 33 WITLILGYGMLGELDVAINLFEAMRED--GVEY---YPVSHIGVLTACSLGGLVEKGKKFFDEM 91 (118)
Q Consensus 33 ~~~li~~~~~~~~~~~a~~~~~~m~~~--~~~p---~~~~~~~ll~~~~~~~~~~~a~~~~~~m 91 (118)
...+...|...|++.+|.+++.++... |... -...+...++.|...+++..|..++.+.
T Consensus 140 ~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 140 TKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKI 203 (445)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 356678888899999999999999643 2222 2467888899999999999999999987
No 411
>2ve8_A FTSK, DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA-binding, winged helix, bacterial cell division; HET: DNA; 1.4A {Pseudomonas aeruginosa} SCOP: a.4.5.67 PDB: 2ve9_A* 2j5o_A*
Probab=21.00 E-value=97 Score=15.80 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=27.6
Q ss_pred HHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC
Q 046694 15 IDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVE 62 (118)
Q Consensus 15 ~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~ 62 (118)
+++|.++.-+....+ .+++.--.+-| +..|-++.++|.+.|+.
T Consensus 12 y~~A~~~V~~~~~aS----~S~lQR~lrIG-YnRAArlid~lE~~GiV 54 (73)
T 2ve8_A 12 YDEAVRFVTESRRAS----ISAVQRKLKIG-YNRAARMIEAMEMAGVV 54 (73)
T ss_dssp HHHHHHHHHHHCCCC----HHHHHHHHTCC-HHHHHHHHHHHHHTTSB
T ss_pred HHHHHHHHHhcCCcc----HHHHHHHHccC-hHHHHHHHHHHHHCCcC
Confidence 566666655444333 23444444444 78899999999999875
No 412
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=20.95 E-value=1e+02 Score=16.09 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCHHHHHHHhhhCCC---CCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCccH---HHHHHHHHHHhc
Q 046694 4 PRLDFYTRTGRIDLANKIFDRLPV---KDSASWITLILGYGMLGELDVAINLFEAMREDGVEYYP---VSHIGVLTACSL 77 (118)
Q Consensus 4 ~ll~~~~~~~~~~~a~~~~~~m~~---~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~---~~~~~ll~~~~~ 77 (118)
.-+..-++.|+.+.+..+++.-.. .|..-++.+..+ +..|..+.+ +.+.+.|..++. .-.+. +...+.
T Consensus 9 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A-~~~~~~~~v----~~Ll~~g~~~~~~d~~g~tp-L~~A~~ 82 (123)
T 3aaa_C 9 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYA-ADCGQLEIL----EFLLLKGADINAPDKHHITP-LLSAVY 82 (123)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHH-HHTTCHHHH----HHHHTTTCCTTCCCTTSCCH-HHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHH-HHcCCHHHH----HHHHHcCCCCCcCCCCCCCH-HHHHHH
Confidence 446667788999988888875432 233334444443 456776544 444455555433 22223 334455
Q ss_pred CCChhhHHHHHHHHhhcCCCc
Q 046694 78 GGLVEKGKKFFDEMQARNVKP 98 (118)
Q Consensus 78 ~~~~~~a~~~~~~m~~~g~~~ 98 (118)
.|+.+.+.. +.+.|..+
T Consensus 83 ~~~~~~v~~----Ll~~ga~~ 99 (123)
T 3aaa_C 83 EGHVSCVKL----LLSKGADK 99 (123)
T ss_dssp HTCHHHHHH----HHHTTCCT
T ss_pred cCCHHHHHH----HHHcCCCC
Confidence 566554444 44455544
No 413
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=20.90 E-value=1.5e+02 Score=18.03 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 046694 31 ASWITLILGYGMLGELDVAINLFEAMR 57 (118)
Q Consensus 31 ~~~~~li~~~~~~~~~~~a~~~~~~m~ 57 (118)
..|..++.+.....+.++..+.++.+.
T Consensus 98 ~ly~~~~~~~~~~~~~~~~~~~l~~ll 124 (216)
T 1pbw_A 98 AVYSEMISLAPEVQSSEEYIQLLKKLI 124 (216)
T ss_dssp HHHHHHHHHGGGCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344444444333334444444444443
No 414
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=20.83 E-value=1.1e+02 Score=16.42 Aligned_cols=11 Identities=45% Similarity=0.588 Sum_probs=5.7
Q ss_pred HHHHHHHHHHH
Q 046694 46 LDVAINLFEAM 56 (118)
Q Consensus 46 ~~~a~~~~~~m 56 (118)
+++|.+++++|
T Consensus 47 l~EA~ell~qM 57 (102)
T 1vcs_A 47 LEEARELLEQM 57 (102)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555555
No 415
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=20.66 E-value=1.7e+02 Score=18.98 Aligned_cols=41 Identities=10% Similarity=-0.008 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCChhhHHHHHHHHhh--cCCCccHHHHHHHHHHH
Q 046694 68 HIGVLTACSLGGLVEKGKKFFDEMQA--RNVKPTETHYACMVYLL 110 (118)
Q Consensus 68 ~~~ll~~~~~~~~~~~a~~~~~~m~~--~g~~~~~~t~~~li~~~ 110 (118)
...+++++.+ ++.++|.++++++.. .|..| ......+.+.+
T Consensus 210 v~~l~~ai~~-~~~~~a~~~~~~l~~~~~g~~~-~~~i~~~~r~l 252 (305)
T 2gno_A 210 CRELLERFSK-VESKEFFALFDQVTNTITGKDA-FLLIQRLTRII 252 (305)
T ss_dssp HHHHHHHHHH-SCGGGHHHHHHHHHHHSCTHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCHHHHHHHHHHHHHhhcCCCH-HHHHHHHHHHH
Confidence 4456666554 788888888888876 67666 33333344433
No 416
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=20.52 E-value=58 Score=19.83 Aligned_cols=55 Identities=11% Similarity=-0.023 Sum_probs=34.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHcCCCccHHH-------HHHHHHHHh--cCCChhhHHHHHHHH
Q 046694 37 ILGYGMLGELDVAINLFEAMREDGVEYYPVS-------HIGVLTACS--LGGLVEKGKKFFDEM 91 (118)
Q Consensus 37 i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~-------~~~ll~~~~--~~~~~~~a~~~~~~m 91 (118)
+...++.|+.+....+++.+.+.|..++... .+.+.-+.. +.|+.+.+..+++.-
T Consensus 9 L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g 72 (260)
T 3jxi_A 9 LFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA 72 (260)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhc
Confidence 4445567888888788887777666655433 234443332 567777777776654
No 417
>1jyo_E Protein tyrosine phosphatase SPTP; bacterial pathogenesis, infectious disease, virulence factor, type III secretion, chaperone, unfolded; 1.90A {Salmonella typhimurium} SCOP: d.184.1.2
Probab=20.42 E-value=1.2e+02 Score=16.63 Aligned_cols=50 Identities=10% Similarity=-0.005 Sum_probs=31.8
Q ss_pred CHHHHHHHhhhCCCCCHhhHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCc
Q 046694 14 RIDLANKIFDRLPVKDSASWITLILGYGMLGELDVAINLFEAMREDGVEY 63 (118)
Q Consensus 14 ~~~~a~~~~~~m~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p 63 (118)
+.+...+.-+.....|..+-..++.++.+.--.+-|..++..+.-+|-.|
T Consensus 27 N~~AVqk~~e~~~~~N~qtL~vFL~ALa~~YG~~~a~~~~~k~Disg~kP 76 (105)
T 1jyo_E 27 NTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALLMSRINMNKP 76 (105)
T ss_dssp CHHHHHHHHHHSCCSCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHCCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcccCCCC
Confidence 34444555555555677777777777777777777777777776555444
No 418
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=20.34 E-value=2.6e+02 Score=20.55 Aligned_cols=33 Identities=6% Similarity=0.275 Sum_probs=19.5
Q ss_pred CChhhHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q 046694 79 GLVEKGKKFFDEMQARNVKPTETHYACMVYLLI 111 (118)
Q Consensus 79 ~~~~~a~~~~~~m~~~g~~~~~~t~~~li~~~~ 111 (118)
-.++....+++++++....-|...|.+||+.+.
T Consensus 463 isI~~iV~~L~~~K~S~~~rdqdvFaCMIh~LF 495 (603)
T 4b8b_A 463 LAIKDVIELLRRLRDSDLPRDQEVFTCITHAVI 495 (603)
T ss_dssp SCHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Confidence 345566666666665554556666666666554
Done!