BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046695
(604 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 39/260 (15%)
Query: 301 GLETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEVESNRSE------KIQTLQN 354
GL + L KV E LR KE L E E+ SLK E+ S + K+ +
Sbjct: 658 GLAVDTTKLREKV----ESLRRRKEAL---EGELNSLKIELRSLENASFELRIKLSDEKK 710
Query: 355 QLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIF- 413
+L+LA KD+ + N+ ++E+ + + +I+ ++ + + E+ L+ + E+K
Sbjct: 711 ELELASKDLNRLLEEENAVKEEIEESERKIQEIEQKIENEKSELAKLRGRIQRLERKKEK 770
Query: 414 -------PEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRI-IKTQKTELEERI 465
PE ++ +I + E + L E+L ESR SLE L + +K LEE I
Sbjct: 771 LKKALENPEARELMEKIRIIDGEISSLKEELSRIESRIESLESRLNEELLPRKASLEEEI 830
Query: 466 ---VGEIEQLKASIAERDKHIENLNRSLDSLKA--------------ERDRLESDVISRD 508
V +I LK +I+E +K +E LN+ L+ LK+ +R +LE D+
Sbjct: 831 EGLVNKINALKNNISENEKALELLNKELEKLKSIEENIKGEIRTLREKRKKLEEDISKLR 890
Query: 509 DRMDQMEKHLQQLHMEHTEL 528
++ + +++ LQ+L +E L
Sbjct: 891 EKKEVLQRKLQELEIEANTL 910
>sp|Q9PW73|SOJO_XENLA Cytoskeletal protein Sojo OS=Xenopus laevis GN=sojo PE=2 SV=2
Length = 1335
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 67/260 (25%)
Query: 302 LETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEVESNRSEKIQTLQNQLQLAQK 361
++ ++LD K A++E +EKL ++E + S R+E+++T QL QK
Sbjct: 857 MQKTQVELDKKACAVLE----LEEKLHIAEKD---------SKRTEEMET---QLSGMQK 900
Query: 362 DIATW------------KSKLNSERKEV--SKLQERIKSLKTSLSDRDHEVRDLKMAVSD 407
++ + K+ L+ E K+V L E+++S K L +RDHEV D+ + D
Sbjct: 901 ELDGYTKQVEELQETLTKTHLSVEEKQVIIQGLTEKLRSYKQELEERDHEVLDMDQLLKD 960
Query: 408 AEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLE-DELRI-IKTQKTELEERI 465
R WE + R+ + +L + I+ K E+E++I
Sbjct: 961 ------------------------------RNWELKQRAAQLTQLDMSIRGHKGEMEQKI 990
Query: 466 VGEIEQL-KASIAERDKHIENLNRSLDSLKAERDRL---ESDVISRDDRMDQMEKHLQQL 521
+ L KA + RD HI+ ++ + L+ RD+L E D++ +D ++Q++K +++
Sbjct: 991 IRLESALEKAELEARD-HIKEISSLDERLQQARDQLCEKEFDLMQKDQIINQLKKDIERS 1049
Query: 522 HMEHTELIKGAEDAHRMVGE 541
H T++ K + R + E
Sbjct: 1050 HQTVTDMEKTLKVQERRISE 1069
>sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1
Length = 2474
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 46/312 (14%)
Query: 240 EKKLRLANEKIHISNEEILRLKIELQKYNSSETNNYLQADFGSPAEINVNMWDA------ 293
EK+ ++ N + +I ++ ++KI+L Y S T + QA + ++++ DA
Sbjct: 589 EKEEQIKNLQEYIDAQKSEKMKIDL-SYTSDATEDLKQA-MRTLSDLDTVALDAKKESAF 646
Query: 294 ------ELQEGINGLETPSLDLDNKVKALMEELRITKE-------KLMLSEAEIASLKQE 340
EL+E IN L +++ ++ +L K+ +L L+ EI+ L
Sbjct: 647 LRSENLELKEKINELSDSRKQMESDIQMYQRQLEAKKKMQTDLDKELQLAFQEISKLSAL 706
Query: 341 VESNRSEKIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRD 400
V+ + L + L+L +K I + +LN E +E LQE + +L + L EV
Sbjct: 707 VDG------KGLLSNLEL-EKRITDLQKELNKEAEEKQTLQEEV-NLLSELKSLPSEVET 758
Query: 401 LKM----------AVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDE 450
L+ ++ +K+F E A + I GL EE + L + R + E
Sbjct: 759 LRRELYEKSEELHIITTEREKLFSEMAHKDSRIQGLLEEIGNTRDDLATSQLSRRGSDGE 818
Query: 451 LRIIKTQKTELEERIVG---EIEQLKASIAERDKHIENLNRSLDSLKAE----RDRLESD 503
+ +++ ELE R G E E+LK I K E+L SLDS+KAE LE
Sbjct: 819 WQALESLHAELEHRHAGVLEERERLKQEIGALSKEAESLAFSLDSVKAELSHKTQELEQK 878
Query: 504 VISRDDRMDQME 515
+ +R+++ME
Sbjct: 879 TVEGQERLNKME 890
>sp|Q640L5|CCD18_MOUSE Coiled-coil domain-containing protein 18 OS=Mus musculus GN=Ccdc18
PE=2 SV=1
Length = 1455
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 28/243 (11%)
Query: 303 ETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEVESNRSEKIQ---TLQNQLQLA 359
E S+ L +++ ++++ + EK S E+ L+ E+ +E +Q L+N+LQ A
Sbjct: 896 ENKSMQL-SQLDMVLDQTKTELEKTTNSVKELERLQHHTETELTETMQKREALENELQNA 954
Query: 360 QKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIFPEKAQI 419
++ + +L R + K Q ++ T++ D E+R+ KM + D +Q++ +
Sbjct: 955 HGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELIEMDQAL 1014
Query: 420 KAEILGLYEEKACLVEQLREWESRGRSLE-DELRI-IKTQKTELEERIV---GEIEQLKA 474
K R WE + R+ + L + I+ + E+E++I+ G +E+ +
Sbjct: 1015 KE----------------RNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSEL 1058
Query: 475 SIAERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHL---QQLHMEHTELIKG 531
+ E +K +E+LN L + K + E ++ + + Q++K + QQ E +IK
Sbjct: 1059 ELKECNKQVESLNEKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVIKE 1118
Query: 532 AED 534
ED
Sbjct: 1119 QED 1121
>sp|Q58718|RAD50_METJA DNA double-strand break repair Rad50 ATPase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rad50 PE=1 SV=1
Length = 1005
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 28/167 (16%)
Query: 346 SEKIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKM-- 403
++K+ ++ + + +K W++K K ++KL+ER K +L ++ E++ L+
Sbjct: 214 NDKLNKIKKEFEDIEKLFNEWENKKLLYEKFINKLEER----KRALELKNQELKILEYDL 269
Query: 404 -AVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSL----EDELRIIKTQK 458
V +A + + K + YE+ LV+++R+ ESR R L ED L++ T++
Sbjct: 270 NTVVEARETLNRHKDE--------YEKYKSLVDEIRKIESRLRELKSHYEDYLKL--TKQ 319
Query: 459 TELEERIVGEIEQLKASIAE---RDKHIENLNRSLDSLKAERDRLES 502
E+ I G+IE+LK I + RD I+NL+ L+ +K E +R+E+
Sbjct: 320 LEI---IKGDIEKLKEFINKSKYRD-DIDNLDTLLNKIKDEIERVET 362
>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3
Length = 2363
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 127/265 (47%), Gaps = 34/265 (12%)
Query: 249 KIHISNEEILRLKIELQKYNSSETNNYLQADFGSPAEINVNMWDAELQEGINGLETPSLD 308
+I EEI RLK E+ + N+S TNN + + ++N E + L+ +D
Sbjct: 1367 RIQQLTEEIGRLKAEIARSNASLTNNQ---NLIQSLKEDLNKVRTEKETIQKDLDAKIID 1423
Query: 309 LDNKVKALM-------------EELRITKEKLMLSEA--------------EIASLKQEV 341
+ KVK + EEL+ ++K+M + A E+ LK+ +
Sbjct: 1424 IQEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETL 1483
Query: 342 ESNRSE-KIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRD 400
N++E K ++L++Q++ QK ++ +++ + +++ +LQ + L+ L DR +
Sbjct: 1484 --NQAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQ 1541
Query: 401 LKMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTE 460
L+ +++ E+K K++I L K L ++ E + R +L+ + + + T
Sbjct: 1542 LRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRITA 1601
Query: 461 LEERIVGEIEQLKASIAE-RDKHIE 484
L+ + G I +L+ + E +++H+E
Sbjct: 1602 LKSQYEGRISRLERELREHQERHLE 1626
>sp|C5DJH6|SP110_LACTC Spindle pole body component 110 OS=Lachancea thermotolerans (strain
ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=SPC110 PE=3 SV=1
Length = 838
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%), Gaps = 31/251 (12%)
Query: 331 EAEIASLKQEVESNRSEKIQTLQNQLQLAQKDIATWKS-KLNSERKEVSKLQERIKSLKT 389
E+E+A+ +E+E NR+E I+ LQN LQ A D ++ KL + KE+ L R+KS
Sbjct: 263 ESELAAKDKELEINRNE-IKNLQNDLQKANHDSSSLADQKLQTRSKEIENLNNRLKSAVR 321
Query: 390 SLSDRDHEVRDLKMAVSD--AEQKIFPEKAQIKAEILGLYEEKA--CLVEQLREWESRGR 445
+H +++ + A+ AE +++ K + L + +EK+ L E+L E S+
Sbjct: 322 EREAAEHLLKESQNALRSLRAELSTLRQESDRKLDDLSVAKEKSERVLKERLEERTSQSE 381
Query: 446 SLEDELRIIKTQKTELEERIVGEIEQLKA------SIAERDKHIENLN------------ 487
L+ ++ EL R+ +++KA + + ++ I++LN
Sbjct: 382 RLQQRANSLEQNAAELSSRLQLRDQRIKALEDEARELQKMNQRIQDLNDGKDSEKLQAQN 441
Query: 488 RSLDSLKAERDRL--ESDVISRDDRMDQMEKHLQQLHMEHTELIKGAEDAHRMVGE---L 542
+ LD L++E +R+ E + + RD+ D+++K + + L + + E L
Sbjct: 442 QKLDGLRSEIERIKNEKEELERDN--DKLKKRIVAQATKSPALKANSRKSLEKDAEAEKL 499
Query: 543 RLKAKELEEEI 553
R + +ELE+E+
Sbjct: 500 RSRVRELEQEL 510
>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein 1B OS=Homo sapiens
GN=SMC1B PE=1 SV=2
Length = 1235
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 310 DNKVKALMEELRITKEKLMLSEAEIASLKQEVESNRSEKIQTLQNQLQ-LAQKDIATWKS 368
+N VKA +E + +L +E E+ S++ + R + I+ +N L + D+A K
Sbjct: 260 ENIVKARKKEHGMLTRQLQQTEKELKSVETLLNQKRPQYIKAKENTSHHLKKLDVA--KK 317
Query: 369 KLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIFPEKAQIKAEI--LGL 426
+ K+ SK ++ IK+L+T L+D D R + + E++I +K I+ E L
Sbjct: 318 SIKDSEKQCSKQEDDIKALETELADLDAAWRSFEKQI---EEEILHKKRDIELEASQLDR 374
Query: 427 YEE--------KACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEIEQLKASIAE 478
Y+E A + +QL + + ++ E+ L K + E++ G ++Q+K I +
Sbjct: 375 YKELKEQVRKKVATMTQQLEKLQWEQKTDEERLAFEKRRHGEVQ----GNLKQIKEQIED 430
Query: 479 RDKHIENL----NRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHMEHTELIKGAED 534
K IE L +D LK ++ + E+ V + +M + ++L++ +EL D
Sbjct: 431 HKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEFNEELNLIRSELQNAGID 490
Query: 535 AH 536
H
Sbjct: 491 TH 492
>sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2
Length = 1871
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 37/255 (14%)
Query: 308 DLDNKVKALMEELRITKEKLMLSEAEIASLKQEVE--SNRSEKIQTLQNQLQLAQKDIAT 365
D++ + K L E ++ T KL E E +K+E+E + E+ + L+N+L +K+
Sbjct: 584 DIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENEL 643
Query: 366 WKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIF------PEKAQI 419
+ K+ + + E+I++L+ S+ + E R LK + + F E +Q+
Sbjct: 644 LQKKITNLKITC----EKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQL 699
Query: 420 KAEILGL---YEEKACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEIEQLKASI 476
E L L E C ++ + + + LE E +E++ +E LKAS
Sbjct: 700 DEENLELRRNVESLKCASMKMAQLQLENKELESE-----------KEQLKKGLELLKASF 748
Query: 477 AERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHMEHTELIKGAEDAH 536
K E L S L E RL+ + + + ++ Q+E LQ L ME+ L K E
Sbjct: 749 ----KKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLE--- 801
Query: 537 RMVGELRLKAKELEE 551
EL++ +K LE+
Sbjct: 802 ----ELKISSKRLEQ 812
>sp|Q1L8T5|CING_DANRE Cingulin OS=Danio rerio GN=cgn PE=2 SV=1
Length = 1161
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 123/248 (49%), Gaps = 10/248 (4%)
Query: 310 DNKVKALMEELRITKEKLMLSEA-EIASLKQEVESNRSEKI-QTLQNQLQLAQKDIATWK 367
++++ L EELR T E S++ ++ L + E + S+ + Q L++ L+ ++++ K
Sbjct: 465 EDQLAQLQEELRRTLENSPQSDSMQLDLLTVQAELSESQLLRQKLEDTLRQRERELTALK 524
Query: 368 SKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIFPEKAQIKAEILGLY 427
L + EV+ + +++L+ S +R VS ++ +I E+ ++ A IL +
Sbjct: 525 GAL---KDEVASHDKEMEALREQFSQDMDALRHSMETVSQSQLEIEEERQKVNASILAME 581
Query: 428 EEKACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEIEQLKASIAERDKHIENLN 487
EE EQ +W+ + S EL + K ELEE+++ ++Q + + + ++ L
Sbjct: 582 EELEGYKEQSEQWKKQFSSANQELLKAQQGKRELEEKLLAVVKQTDET--DSNSVMKELQ 639
Query: 488 RSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHMEHTELIKGAEDAHRMVGELRLKAK 547
+ DSLK + LE + ++++ + TEL + R++ +L+ + +
Sbjct: 640 QCRDSLKKAQSELEKQKAETLKKQEELKSATRASEKRETEL---KAEIDRLINQLKKEKE 696
Query: 548 ELEEEIEK 555
EL + IEK
Sbjct: 697 ELSKAIEK 704
>sp|P82094|TMF1_HUMAN TATA element modulatory factor OS=Homo sapiens GN=TMF1 PE=1 SV=2
Length = 1093
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 30/175 (17%)
Query: 421 AEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEIEQLKASIAERD 480
A++L L +EKA L E + +++E I + K E +RI ++++ + ERD
Sbjct: 463 AQLLSLSKEKALLEEAFDNLKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERD 522
Query: 481 ---KHIENLNRSLDSLKAERDRLES----DVISRDDR-----MDQMEK-HLQQLHMEHTE 527
K I+N+ L + RL S D++ D M++ EK QQLH ++
Sbjct: 523 AAKKEIKNIKEELAT------RLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLH--NSN 574
Query: 528 LIKG--AEDA--HRMVGELRLKAKELEEEIEKQRVVILEGAEE----KREAIRQL 574
+IK A+D MV +L K KELEEE++ + V L+G EE RE I++L
Sbjct: 575 IIKKLRAKDKENENMVAKLNKKVKELEEELQHLKQV-LDGKEEVEKQHRENIKKL 628
>sp|Q5VU43|MYOME_HUMAN Myomegalin OS=Homo sapiens GN=PDE4DIP PE=1 SV=1
Length = 2346
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 48/340 (14%)
Query: 191 LQRKVNELETELREAKEKLHSQEERIAD--ESMKGAKNENPEALFARIVGYEKKLRLANE 248
LQ K+NE+ EL+ A+E Q+ I + E++K + E E L+ I G + E
Sbjct: 258 LQEKLNEMSYELKCAQESSQKQDGTIQNLKETLKSRERET-EELYQVIEGQNDTMAKLRE 316
Query: 249 KIHISNEEILRLKIELQKYNSSETNNYLQADFGSPAEINVNMWDAELQEGINGLETPSLD 308
+H S +L + +SSE SPA+ V + D LQ + +
Sbjct: 317 MLHQS---------QLGQLHSSEGT--------SPAQQQVALLD--LQSALFCSQLEIQK 357
Query: 309 LDNKVKALMEELRITKEKLMLSEAEIASLKQEVESN------RSEKIQTLQNQLQLAQKD 362
L V+ +L K+ + EA +Q+ E++ + +Q LQ +LQ +
Sbjct: 358 LQRVVRQKERQLADAKQCVQFVEAAAHESEQQKEASWKHNQELRKALQQLQEELQNKSQQ 417
Query: 363 IATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQKIFPEKAQIKAE 422
+ W+++ + E+ ++ I+ L SLS ++ +++ F E Q +
Sbjct: 418 LRAWEAE---KYNEIRTQEQNIQHLNHSLSHKEQLLQE------------FRELLQYRDN 462
Query: 423 ILGLYEEKACLVEQLRE-WESRGRSLEDELRIIKTQKTELEERIVGEIEQLKASIAERDK 481
E L+E+LR+ + +LE R I + + LEE+ E+ QL+ ++ ERD
Sbjct: 463 SDKTLEANEMLLEKLRQRIHDKAVALE---RAIDEKFSALEEK-EKELRQLRLAVRERDH 518
Query: 482 HIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQL 521
+E L L S +A +ES + ++ ++Q+ Q L
Sbjct: 519 DLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNL 558
>sp|Q8BI22|CE128_MOUSE Centrosomal protein of 128 kDa OS=Mus musculus GN=Cep128 PE=2 SV=2
Length = 1102
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 430 KACLVEQLREWESRG----RSLEDELRIIKTQKTELEERIVGEIEQLKASIAERDKHIEN 485
KA E +R+W+ + RS+E + + Q TE + + E ++LK+ + + IEN
Sbjct: 482 KAKAQESIRQWKLKHKKLERSMEKQAETL-VQLTEKNNQFIKERDELKSQLCAALQQIEN 540
Query: 486 LNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHMEHTELIKGAEDA-HRMVGELRL 544
L + L+ + ++R E ++ ++ +++ +E H +L +E +K + D HR+ EL+
Sbjct: 541 LRKELNDVLSKRALQEEELHCKEKKLNDIESHQAELELE----VKNSLDTIHRLENELKR 596
Query: 545 KAK 547
++K
Sbjct: 597 QSK 599
>sp|Q5SXY1|CYTSB_MOUSE Cytospin-B OS=Mus musculus GN=Specc1 PE=1 SV=2
Length = 1067
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 195/493 (39%), Gaps = 113/493 (22%)
Query: 34 NLEEMDQSVKRMLKLIEEDGDSFAKKAEMYYQKRPELISHVEEFYRMYRSLAERYDHVTG 93
+LEE ++++K L +E+ +S + P I+H F + T
Sbjct: 241 DLEEENRALKEKLTYLEQSPNSEGAASHTGDSSCPTSITHESSFGS---PVGNELSSETD 297
Query: 94 ELRKNI-PSDLQSQGSGISDISSELPSMCPSPDQ-------RPSRRKSGPRAAGFDFFLG 145
E R+ S L++ GS SD++ S+ P PSR P +A + F
Sbjct: 298 EYRRTTHGSALRTSGSSSSDVTKA--SLSPDASDFEHITADTPSR----PLSATSNPFKS 351
Query: 146 SAGSSAEFYPKEGDESSSISDSES-----ESDSSSVNNYSAFAGNGDDQGLQRKVNELET 200
S GS P E S S +E E+ S+ A DQ Q+ V EL
Sbjct: 352 SKGSPTGSSPNNASELSLASLTEKIQKMEENQHSTAEELQATLQELSDQ--QQMVQELTA 409
Query: 201 E-----------------LREAKEKLHSQEERIADESMKGAKNENPEALFARIVGYEKKL 243
E RE E+L + E++ + + KNE P A +++ E+K
Sbjct: 410 ENEKLVDEKTILETSFHQHRERAEQLSQENEKLINLLQERVKNEEPSAQGGKVLELEQKC 469
Query: 244 RLANEKIHISNEEILRLKIELQKYNSSETNNYLQADFGSPAEINVNMWDAELQEGINGLE 303
EK E++L ++ +L T + + + + I++ E E +NG
Sbjct: 470 TDILEKSRFEREKLLNIQQQL-------TCSLRKVEEENQGAIDMIKHLKEENEKLNGF- 521
Query: 304 TPSLD---LDNKVKA-LMEELRITKEKLMLSEAEIASLKQEVESNRSEKI-------QTL 352
L+ +N V A +EE R+T E L + E SLK +E+++ + I QT
Sbjct: 522 ---LEHERCNNSVMAKTLEECRVTLEGLKM---ENGSLKALLEADKQKAIEASSTVGQTA 575
Query: 353 QN---------------QLQLAQKDIATWKSKLNSERKEVSKLQERIKS----------- 386
+N QLQL+ ++ K N E K VS L +++
Sbjct: 576 ENFEVQEMLKVARAEKDQLQLSCTELRQELLKANGEIKHVSSLLAKMEKDYSYLKEVCDH 635
Query: 387 -----LKTSL------SDRDHEVRDLKMAVSDAEQKIFPEKA----------QIKAEILG 425
+TSL S+ D E++D+K + + E ++ +A +++ ++
Sbjct: 636 QAEQLSRTSLKLQEKASESDAEIKDMKETIFELEDQVEQHRAVKLHNNQLISELEGSVIK 695
Query: 426 LYEEKACLVEQLR 438
L E+K+ L QL+
Sbjct: 696 LEEQKSDLERQLK 708
>sp|P12844|MYO3_CAEEL Myosin-3 OS=Caenorhabditis elegans GN=myo-3 PE=2 SV=1
Length = 1969
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 126/259 (48%), Gaps = 34/259 (13%)
Query: 295 LQEGINGLETPSLDLDNKVKALMEELRITKEKLMLS-EAEIASLKQEVESNRSEKIQTLQ 353
L+E + E L+++V L+EE K L LS E E A+L E R+EK+
Sbjct: 872 LEEAVQRGEIARSQLESQVADLVEE----KNALFLSLETEKANLADAEE--RNEKL---- 921
Query: 354 NQLQLAQKDIATWKSKLNSERKEVSKLQERIKSL-----KTS--LSDRDHEVRDLKMAVS 406
NQL+ AT +SKL+ ++ +QER + L KT LSD V+DL++++
Sbjct: 922 NQLK------ATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQDLELSLR 975
Query: 407 DAEQKIFPEKAQIKA---EILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTELEE 463
AEQ+ I++ E+ E A L ++ + E R L ++L+ + + L E
Sbjct: 976 KAEQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHL-E 1034
Query: 464 RIVGEIEQLKASIAERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHM 523
+I ++EQ + E +++I+ RS ++ + ++E D+ + +D++ K Q H
Sbjct: 1035 KIRNKLEQ---QMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITK---QKHD 1088
Query: 524 EHTELIKGAEDAHRMVGEL 542
T L + ED H +L
Sbjct: 1089 VETTLKRKEEDLHHTNAKL 1107
>sp|P21249|ANT1_ONCVO Major antigen OS=Onchocerca volvulus GN=OVT1 PE=2 SV=2
Length = 2022
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 350 QTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAE 409
Q L++QL+ AQ D++ ++ E+ ++ ++ LK SD + + DL+ ++DAE
Sbjct: 1610 QILKDQLESAQNDLSNANNRKQQLENELLVVRSELRDLKQRFSDNANRIIDLQRHLTDAE 1669
Query: 410 -------------QKIFPEKAQIKAEI---LGL-YEEKACLVEQLREWESRGRSLEDELR 452
+K ++ I+ EI L L E+ L LR+ + R +E E +
Sbjct: 1670 NDKKRLTNRLNSLEKTVSQQRTIETEIRQQLSLALNERNTLQNDLRDLQRRLARMETEKK 1729
Query: 453 IIKTQKTELE 462
I+ + ELE
Sbjct: 1730 IMNDKYDELE 1739
>sp|Q97FK1|SBCC_CLOAB Nuclease SbcCD subunit C OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=sbcC PE=3 SV=1
Length = 1163
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 41/279 (14%)
Query: 337 LKQEVESNRSEKIQTLQNQLQLAQKD------IATWKSKLNSERKEVSKLQERIKSLKTS 390
L ++E RS K+ T +LQ KD + T++ KLN R++ +K E +SLK S
Sbjct: 464 LFNKLEEERS-KLDTYTKKLQDLNKDFPKDDVLLTFQEKLNDSRQKWAKYSEYNESLKAS 522
Query: 391 L---SDRDHEVRDLKMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWES----- 442
L + + +R K ++ E KI K IK E L L E+L+ E+
Sbjct: 523 LRVVENSEQVLRTKKEEMTKLEDKI--SKVNIKIESLETENMAHVLREKLKSGEACPVCG 580
Query: 443 -----RGRSLEDELRIIKTQKTELEERIVG----------EIEQLKASIAERDKHIENLN 487
+ E +L+ ++T K+ELE G EI +ASI +K+I+ LN
Sbjct: 581 SVHHIKEGFKEVDLKALETLKSELE----GFEKKRKFENEEIVMCEASIKVEEKNIKKLN 636
Query: 488 RSLDSLKAERDRLESDVISRDDRMDQMEKHLQQLHMEHTELIKGAEDAHRMVGELRL--- 544
S+++L E E + S + + + +++ + + ++E +L +D ++ +
Sbjct: 637 ESINNLGEEFK--EVSLESMEKKFNYLKEKVNKFNLEKIQLDDNIKDLSERSNKIEVEYQ 694
Query: 545 KAKELEEEIEKQRVVILEGAEEKREAIRQLCFSLEHYRS 583
K K +E++ EK+ V + EE + ++ +++E+ ++
Sbjct: 695 KEKTVEKQCEKRIVDLKSELEEAIKEFNEVAYTIENLKA 733
>sp|Q6P6L0|FIL1L_MOUSE Filamin A-interacting protein 1-like OS=Mus musculus GN=Filip1l
PE=1 SV=2
Length = 1131
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 110/225 (48%), Gaps = 33/225 (14%)
Query: 383 RIKSLKTSLSDRDHEVRDLKMAVSDAEQKIFPEKAQIKAEILGLY------EEKACLVE- 435
RIK+LK L+ +++ + V D +Q++ + A + +I L + K L E
Sbjct: 222 RIKTLKEELT----KLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKETQGKLALAEA 277
Query: 436 QLREWESRGRSLEDELRIIKTQKTELEERIVGEIE-------QLKASIAERDKHIENLNR 488
+ +E E + LE EL+ T+ + +++I+ ++ QL+ +A + I+ L
Sbjct: 278 RAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAALSRQIDELEE 337
Query: 489 SLDSLKAERDRLES--DVISRD--------DRMDQMEKHLQQLHMEHTELIKGAE---DA 535
+ SL+ + L+ D I++ D +D++ K + + + ELIK E D
Sbjct: 338 TNRSLRKAEEELQDIKDKINKGEYGNSGIMDEVDELRKRVLDMEGKDEELIKMEEQCRDL 397
Query: 536 HRMVGELRLKAKELEEEIEK--QRVVILEGAEEKREAIRQLCFSL 578
++ + + +++K+ + E++K R+ LE E+ + +Q C+SL
Sbjct: 398 NKRLEKETVQSKDFKLEVDKLSVRITALEKLEDALDKSKQECYSL 442
>sp|Q92878|RAD50_HUMAN DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1
Length = 1312
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 26/273 (9%)
Query: 282 SPAEINVNMWDAELQEGINGLETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEV 341
P V +AELQE I+ L++ +K+K+ EL+ KEK + ++Q +
Sbjct: 681 CPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK-KKEKRRDEMLGLVPMRQSI 739
Query: 342 ESNRSEKIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDL 401
+ ++I L+N+LQ +DI K+ + + + + +S K L+D R
Sbjct: 740 IDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMER-F 798
Query: 402 KMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTEL 461
+M + D E+KI AQ A++ G+ ++ V+Q+ + K +K
Sbjct: 799 QMELKDVERKI----AQQAAKLQGIDLDRT--VQQVNQE--------------KQEKQHK 838
Query: 462 EERIVGEIEQLKASIAERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQL 521
+ + +IE + I ++ + I++L + + LK+E+ ++ +++ R Q+E+ +L
Sbjct: 839 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNL----QRRQQLEEQTVEL 894
Query: 522 HMEHTELIKGAEDAHRMVGELRLKAKELEEEIE 554
E L + +DA V L ++ ++E E
Sbjct: 895 STEVQSLYREIKDAKEQVSPLETTLEKFQQEKE 927
>sp|Q9JIL8|RAD50_RAT DNA repair protein RAD50 OS=Rattus norvegicus GN=Rad50 PE=1 SV=1
Length = 1312
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 282 SPAEINVNMWDAELQEGINGLETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEV 341
P V +AELQE I+ L++ +K+K+ EL+ KE+ + ++Q +
Sbjct: 681 CPGCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK-KKERRRDEMLGLVPMRQSI 739
Query: 342 ESNRSEKIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDL 401
+ ++I L+N+LQ +DI K+ + + + + +S K L+D R
Sbjct: 740 IDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMER-F 798
Query: 402 KMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTEL 461
+M + D E+KI AQ A++ G+ ++ V+Q+ + K +K
Sbjct: 799 QMELKDVERKI----AQQAAKLQGVDLDRT--VQQVNQE--------------KQEKQHK 838
Query: 462 EERIVGEIEQLKASIAERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHLQQL 521
+ + +IE + I ++ + I++L + LK+E+ ++ +++ R QME+ +L
Sbjct: 839 LDTVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNL----QRRQQMEEQTVEL 894
Query: 522 HMEHTELIKGAEDAHRMVGELRLKAKELEEEIE 554
E L + +DA + L + ++L++E E
Sbjct: 895 STEVQSLNREIKDAKEQINPLEIALEKLQQEKE 927
>sp|P70388|RAD50_MOUSE DNA repair protein RAD50 OS=Mus musculus GN=Rad50 PE=1 SV=1
Length = 1312
Score = 32.7 bits (73), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 32/276 (11%)
Query: 282 SPAEINVNMWDAELQEGINGLETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEV 341
P V +AELQE I+ L++ +K+K+ EL+ KE+ + ++Q +
Sbjct: 681 CPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK-KKERRRDEMLGLVPVRQSI 739
Query: 342 ESNRSEKIQTLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDL 401
+ ++I L+N+LQ +DI K+ + + + + +S K L+D R
Sbjct: 740 IDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMER-F 798
Query: 402 KMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTEL 461
+M + D E+KI + A+++ G L+ ++ + +K E
Sbjct: 799 QMELKDVERKIAQQAAKLQ-----------------------GVDLDRTVQQVNQEKQEK 835
Query: 462 EER---IVGEIEQLKASIAERDKHIENLNRSLDSLKAERDRLESDVISRDDRMDQMEKHL 518
+ R + +IE + I ++ + I++L + LK+E+ ++ +++ R QME+
Sbjct: 836 QHRLDTVTSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNL----QRRQQMEEQS 891
Query: 519 QQLHMEHTELIKGAEDAHRMVGELRLKAKELEEEIE 554
+L E L + +DA + L ++L++E E
Sbjct: 892 VELSTEVQSLNREIKDAKEQISPLETALEKLQQEKE 927
>sp|Q60952|CP250_MOUSE Centrosome-associated protein CEP250 OS=Mus musculus GN=Cep250 PE=1
SV=4
Length = 2414
Score = 32.7 bits (73), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 296 QEGINGLETPSLDLDNKVKALMEELRITKEKLMLSEAEIASLKQEVESNRSE---KIQTL 352
QE I L+ L+ +++ L ++ T L E E A+L+Q ++ + + + Q L
Sbjct: 1734 QERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVL 1793
Query: 353 QNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLK--------------TSLSDRDHEV 398
Q QL+ AQ+D+A +L + R+E + Q++ +S+K +L +R E+
Sbjct: 1794 QGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGEL 1853
Query: 399 RDLKMAVSDAEQKIFPEKAQIKA--EILGLY------EEKACL------VEQLREWESRG 444
+ + V ++++ E Q++A E+LG EKA L EQ +E E+
Sbjct: 1854 EEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEA 1913
Query: 445 RSLED 449
R+L+D
Sbjct: 1914 RTLQD 1918
>sp|Q86UP2|KTN1_HUMAN Kinectin OS=Homo sapiens GN=KTN1 PE=1 SV=1
Length = 1357
Score = 32.7 bits (73), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 32/277 (11%)
Query: 235 RIVGYEKKLRLANEKIHISNEEILRLKIELQKYNSSETNNYLQADFGSPAEINVNMWDAE 294
RI EK+ + KIH+S +E +++++ Q+ ++A+ + N + DA
Sbjct: 379 RIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQ-----MEAEIAHLKQENGILRDA- 432
Query: 295 LQEGINGLETPSLDLDNKVKALMEELRITKEKLM--LSEAEIASLKQEVESNRSEKIQT- 351
+ N LE+ K A + +LR +L+ L+E ++EV+ +E+ T
Sbjct: 433 VSNTTNQLES-------KQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQ 485
Query: 352 LQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTSLSDRDHEVRDLKMAVSDAEQK 411
L+ QLQ A++ W+ + RK ++ + + L++ +++EV+ L ++D
Sbjct: 486 LKVQLQEAER---RWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDT--- 539
Query: 412 IFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEI-- 469
K Q++ ++ L E + V + + + + + ++ +K Q + +I +
Sbjct: 540 -LVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSA 598
Query: 470 ----EQLKASIAERDKHIENLNRSLDSLKAERDRLES 502
E+L IAE+DK I+ ++ DSL +ERDRL S
Sbjct: 599 SVLAEELHKVIAEKDKQIK---QTEDSLASERDRLTS 632
>sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2
Length = 1939
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 410 QKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKTQKTELEERIVGEI 469
QK+ EK+++K EI L + + +E R+LED+L IKT K E ++R++ E+
Sbjct: 1219 QKLEKEKSELKMEINDLASNMETVSKAKANFEKMCRTLEDQLSEIKT-KEEEQQRLINEL 1277
Query: 470 EQLKA-----------SIAERD--------------KHIENLNRSLDSLKAERDRLESDV 504
KA + E+D + IE L R L+ + L +
Sbjct: 1278 SAQKARLHTESGEFSRQLDEKDAMVSQLSRGKQAFTQQIEELKRQLEEETKAKSTLAHAL 1337
Query: 505 ISRDDRMDQMEKHLQQLHMEHTELIKGAEDAHRMVGELRLK--------AKELEEEIEK- 555
S D + + ++ EL +G A+ V + R K +ELEE +K
Sbjct: 1338 QSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKL 1397
Query: 556 -QRVVILEGAEEKREAIRQLCFSLE 579
QR L+ AEE EA+ C SLE
Sbjct: 1398 AQR---LQDAEEHVEAVNSKCASLE 1419
>sp|B3LFU6|SP110_YEAS1 Spindle pole body component 110 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=SPC110 PE=3 SV=1
Length = 944
Score = 32.7 bits (73), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 52/269 (19%)
Query: 298 GINGLETPSLDLDNKVKALMEEL----RITKEKLMLSEAEIASLKQEVESNRSE---KIQ 350
+ LE + DL N+++AL +EL +I + + + ++++E +E K++
Sbjct: 185 NYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDHSGCIEEREQMERKLAELERKLK 244
Query: 351 TLQNQLQLAQKDIATWKSKLNSERKEVSKLQERIKSLKTS--------------LSDRDH 396
T+++Q+ + + KL S+ E+ L + LK++ L R +
Sbjct: 245 TVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSNAEEKDTQLEFKKNELRKRTN 304
Query: 397 EVRDLKMAVSDAEQKIFPEKAQIKAEILGLYEEKACLVEQLREWESRGRSLEDELRIIKT 456
E+ +LK+ + + ++ Q + E L +E L + RE S+ + E+EL+++K
Sbjct: 305 ELNELKIKSDEMDLQL----KQKQNESKRLKDELNELETKFRENGSQSSAKENELKMLKN 360
Query: 457 QKTELEERI-----------------VGEIEQLKASIAERDKHIENLNRSLDSLKAERDR 499
+ ELEE I + ++ QL++ + +RD L + LK D+
Sbjct: 361 KIAELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLNQRDSQ---LGSREEELKKTNDK 417
Query: 500 LESDV-------ISRDDRMDQMEKHLQQL 521
L+ D+ +S+D+R+ ++K ++QL
Sbjct: 418 LQKDIRIAREETVSKDERITDLQKKVKQL 446
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,613,303
Number of Sequences: 539616
Number of extensions: 9265001
Number of successful extensions: 74078
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 3456
Number of HSP's that attempted gapping in prelim test: 53862
Number of HSP's gapped (non-prelim): 13528
length of query: 604
length of database: 191,569,459
effective HSP length: 123
effective length of query: 481
effective length of database: 125,196,691
effective search space: 60219608371
effective search space used: 60219608371
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)