Query 046696
Match_columns 609
No_of_seqs 182 out of 851
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 05:37:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b2g_A GH3-1 auxin conjugating 100.0 1E-131 4E-136 1104.3 45.7 583 19-603 16-599 (609)
2 4eql_A 4-substituted benzoates 100.0 1E-128 4E-133 1079.3 42.6 561 20-590 12-580 (581)
3 4epl_A Jasmonic acid-amido syn 100.0 6E-128 2E-132 1070.5 48.1 563 18-593 12-581 (581)
4 3qov_A Phenylacetate-coenzyme 99.9 5.1E-24 1.7E-28 231.2 25.5 389 28-550 10-421 (436)
5 2y27_A Phenylacetate-coenzyme 99.9 5.1E-23 1.7E-27 223.4 24.9 318 33-463 20-354 (437)
6 2y4o_A Phenylacetate-coenzyme 99.9 8.2E-23 2.8E-27 222.2 25.9 318 33-463 22-356 (443)
7 3hgu_A EHPF; phenazine, antibi 99.7 2.7E-16 9.3E-21 166.6 15.0 309 38-449 21-367 (369)
8 2d1s_A Luciferase, luciferin 4 99.7 4.4E-15 1.5E-19 165.9 23.1 130 310-463 311-462 (548)
9 3etc_A AMP-binding protein; ad 99.6 1.3E-14 4.3E-19 163.5 24.7 128 310-463 343-496 (580)
10 3e7w_A D-alanine--poly(phospho 99.6 1.2E-14 4.2E-19 160.6 24.0 133 302-463 257-419 (511)
11 3ni2_A 4-coumarate:COA ligase; 99.6 1.2E-14 4.2E-19 161.6 21.9 130 310-463 299-455 (536)
12 3fce_A D-alanine--poly(phospho 99.6 9.9E-15 3.4E-19 161.3 20.2 128 310-463 263-420 (512)
13 4fuq_A Malonyl COA synthetase; 99.6 2.6E-14 8.9E-19 157.9 22.4 129 310-463 270-420 (503)
14 3kxw_A Saframycin MX1 syntheta 99.6 1.4E-14 4.8E-19 162.6 19.3 63 397-464 393-480 (590)
15 3g7s_A Long-chain-fatty-acid-- 99.6 3E-14 1E-18 159.0 20.8 153 280-463 275-460 (549)
16 1t5h_X 4-chlorobenzoyl COA lig 99.6 4.8E-14 1.6E-18 155.6 22.2 153 280-463 251-423 (504)
17 1mdb_A 2,3-dihydroxybenzoate-A 99.6 4.3E-14 1.5E-18 157.5 21.8 128 310-463 300-451 (539)
18 3rix_A Luciferase, luciferin 4 99.6 9.2E-15 3.2E-19 163.2 15.6 151 280-464 288-461 (550)
19 3l8c_A D-alanine--poly(phospho 99.6 3.2E-14 1.1E-18 157.5 19.2 129 310-463 266-424 (521)
20 1pg4_A Acetyl-COA synthetase; 99.6 2.3E-13 7.8E-18 155.3 26.6 228 309-584 379-645 (652)
21 3ivr_A Putative long-chain-fat 99.6 7.2E-15 2.5E-19 162.3 12.0 130 310-464 274-422 (509)
22 3o83_A Peptide arylation enzym 99.6 1.1E-14 3.8E-19 162.4 13.2 151 280-464 288-461 (544)
23 3c5e_A Acyl-coenzyme A synthet 99.6 1.3E-13 4.3E-18 155.0 21.7 128 310-463 324-477 (570)
24 3ite_A SIDN siderophore synthe 99.6 4.2E-14 1.4E-18 158.1 17.3 130 310-464 296-449 (562)
25 3r44_A Fatty acyl COA syntheta 99.6 1.5E-13 5.1E-18 152.3 21.3 126 310-463 286-434 (517)
26 2v7b_A Benzoate-coenzyme A lig 99.5 1.9E-13 6.5E-18 151.6 21.6 128 310-463 302-450 (529)
27 3nyq_A Malonyl-COA ligase; A/B 99.5 3.1E-13 1.1E-17 149.4 23.1 131 310-463 274-427 (505)
28 1ry2_A Acetyl-coenzyme A synth 99.5 2.1E-13 7.2E-18 156.0 21.3 229 308-582 384-659 (663)
29 3rg2_A Enterobactin synthase c 99.5 4.9E-13 1.7E-17 151.4 23.2 152 280-463 281-455 (617)
30 4gr5_A Non-ribosomal peptide s 99.5 6.8E-14 2.3E-18 156.9 15.2 148 280-464 310-491 (570)
31 1amu_A GRSA, gramicidin synthe 99.5 5.6E-13 1.9E-17 149.4 21.9 129 310-463 295-451 (563)
32 3ipl_A 2-succinylbenzoate--COA 99.5 8.4E-13 2.9E-17 145.3 22.2 140 280-463 258-419 (501)
33 3tsy_A Fusion protein 4-coumar 99.5 1.8E-13 6E-18 163.1 17.3 131 310-464 346-503 (979)
34 3gqw_A Fatty acid AMP ligase; 99.5 2.4E-13 8.2E-18 151.8 15.7 63 397-464 405-483 (576)
35 4dg8_A PA1221; ANL superfamily 99.5 4.4E-13 1.5E-17 152.2 15.4 130 310-463 278-440 (620)
36 1v25_A Long-chain-fatty-acid-C 99.4 5.9E-13 2E-17 148.3 13.7 128 310-464 295-457 (541)
37 4gs5_A Acyl-COA synthetase (AM 99.4 1.1E-12 3.6E-17 139.0 10.9 120 310-465 150-273 (358)
38 2vsq_A Surfactin synthetase su 99.3 7.3E-12 2.5E-16 153.5 16.3 129 310-463 722-882 (1304)
39 3t5a_A Long-chain-fatty-acid-- 98.8 9.2E-09 3.1E-13 111.9 11.1 39 397-440 414-480 (480)
40 3lax_A Phenylacetate-coenzyme 97.2 0.00086 2.9E-08 57.9 7.5 92 440-549 2-93 (109)
41 3gxs_A Phenylacetate-coenzyme 97.0 0.0017 5.8E-08 56.2 7.4 94 439-550 1-94 (109)
42 3onr_A Protein transport prote 30.1 1.4E+02 0.0046 23.6 6.3 48 451-499 16-64 (72)
43 2cc6_A VNG1446H, dodecin; flav 26.5 1.6E+02 0.0053 22.9 6.0 48 451-499 14-62 (68)
44 1lbj_A Motilin; A-helix, B-tur 20.7 49 0.0017 20.5 1.6 17 75-91 2-18 (26)
No 1
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=100.00 E-value=1.2e-131 Score=1104.27 Aligned_cols=583 Identities=66% Similarity=1.134 Sum_probs=531.7
Q ss_pred ccccHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCChHHHhhCCCCCCChHhHhhhCCCCChhchhHHHHHHhcCCCCCc
Q 046696 19 SDNNKKALKFIESVTSQADEVQDRVLAEILSCSANVEYLQRYGLNGHVDKGTFKKVMPVITYEDLKPYVDRIANGDCSPI 98 (609)
Q Consensus 19 ~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yedl~p~ier~~~Ge~~~v 98 (609)
...+++.++.||+.++++.++|+++|++||+.|++|+|||+|||++|+|++||+++|||++|||++|||||+++|+.+++
T Consensus 16 ~~~~~~~l~~~e~~~~~~~~~Q~~~L~~lL~~~~~T~~gr~~gf~~i~~~~dF~~~VPv~~Yedl~p~ieRi~~Ge~~~i 95 (609)
T 4b2g_A 16 SEKDAKALQFIEEMTRNADSVQERVLAEILSRNGETEYLKRFKLEGSTVRETFKSKIPVIKYEDLQPEIQRIANGDRSAI 95 (609)
T ss_dssp CHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHSTTSHHHHTTCCTTCCSHHHHHHHSCCBCHHHHHHHHHHHHTTCCSSS
T ss_pred ccchHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCChHHHhcCCCCCCCHHHHHHhCCCccHHHHHHHHHHHhcCCCCCc
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999997789
Q ss_pred ccCCCcceeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeeccccc
Q 046696 99 LCSQPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTS 178 (609)
Q Consensus 99 l~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~ 178 (609)
||++|+.+|++|||||||++|+||+|+++++.+..++++|..++++.+|.++.||.|++++++.+..|++|+|+|++|+.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~l~~~~~~~~t~~Gi~~g~~s~~ 175 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTS 175 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHHHHHHHHHHHHHHHHHSCCGGGSEEEECCCCCCCEECTTSCEEECHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHHHHHHHHHHHHHHHhcCCcccCCCeEEEcccCCcccCCCCcccccchhh
Confidence 99999999999999999999999999999999888899999999988998888999999878888889999999999999
Q ss_pred cccccccCCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHHHHcc
Q 046696 179 YYKSSLFKDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCNDIRKG 258 (609)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g 258 (609)
++++.+|+++|.+|...|++|.+++.++|..+++||||||||.++++|++|+++|+++++++++.|+++|+++|+||++|
T Consensus 176 ~~~s~~f~~~p~~~~~~~~sP~~~i~~~D~~~~~Y~~Ll~~L~~~~~v~~lsa~fa~~ll~~~~~L~~~Weel~~dI~~g 255 (609)
T 4b2g_A 176 YYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTG 255 (609)
T ss_dssp HHTSHHHHTCCCCTTCCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccchhhccccchhhcccCcHHHhcCcCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhhHHHHHhhcCcCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCccchHHHHhhhcCCCCeeccc
Q 046696 259 TIDPKITDPSVREAVLKILKPNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTMSQYIPTLDYYSNGLPLVCTM 338 (609)
Q Consensus 259 t~~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~~~y~~~l~~~~~g~~~~~~~ 338 (609)
+++++++++++|++++++++|+|++|++|+++|.+.+|.|++++|||||++|.||++|||.+|++++++++||+|+++.+
T Consensus 256 tl~~~it~~~~r~a~~~~lsp~~~la~~l~~~~~~~~~~g~i~~lWPnlk~l~~~~tG~~~~Y~~~l~~~~g~~p~~~~~ 335 (609)
T 4b2g_A 256 TLSPKITDPSVRNCVAGVLKPDPELADLVAGECSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTM 335 (609)
T ss_dssp CCCTTCCCHHHHHHTTTTCCCCHHHHHHHHHHHTSSCCTTTHHHHSTTCCEEEEECSGGGGGGHHHHHHHHTSCCEECCE
T ss_pred cCCcCCCCHHHHHHHhcCCCcCHHHHHHHHHHhCCCccccCHHHhCCCCcEEEEEccCChHHHHHHHHHHcCCCccccCc
Confidence 99999999999999999999999999999999998779999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeeccceeeee
Q 046696 339 YASSECYFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTYAGLYRYR 418 (609)
Q Consensus 339 YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~~GlyRYr 418 (609)
|+||||++|+|++|.|+|+..+|+|+|+.+||||||+++.+.. ..+.+++++|+++||++|++|||||||.+||||||
T Consensus 336 Y~ASEg~~gi~~~p~~~p~~~~~~L~p~~~ffEFIP~~~~~~~--~~~~~~~~~v~l~eVe~G~~YelViTt~~GL~RYr 413 (609)
T 4b2g_A 336 YASSECYFGLNLNPMSKPSEVSYTIMPNMAYFEFLPHEHSSIP--LSRDSPPRLVDLAHVEVGKEYELVITTYAGLYRYR 413 (609)
T ss_dssp EECSSCEEEECSCTTSCGGGCCEEECTTSCEEEEEEGGGTTSC--CCSSSCCCCEEGGGCCTTCEEEEEEECTTSCCSEE
T ss_pred ccccceeeeeecCCCCCcccCceeecCCcEEEEEEeccccccc--cccCCCCccccHhHcCCCCeEEEehhhhhhhhhee
Confidence 9999999999999999988889999999999999998864100 00145688999999999999999999999999999
Q ss_pred cCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEe
Q 046696 419 VGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPGRYVLFWEIS 498 (609)
Q Consensus 419 ~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~~ 498 (609)
+||+|+|+||++++|+|+|+||.+++||++||||++++|++||.+|++.|+++|+.|.|||+++|.++.||||+||||++
T Consensus 414 ~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~~~v~~av~~a~~~l~~~g~~l~eft~~~d~~~~p~Hyv~~wEl~ 493 (609)
T 4b2g_A 414 VGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVDNASKLLREVNTSVVEYTSFADTKTIPGHYVIYWELL 493 (609)
T ss_dssp EEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHHHHHGGGGTTEEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred cCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCHHHHHHHHHHHHHhhhccCCeEEEEEEecCCCCCCCcEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999877778999999999999888899999999997
Q ss_pred eC-CCCCCChhhHHHHHHHHHHHhChHhHhhccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCCCCCcccCCHhHH
Q 046696 499 QS-GATQIPPSVFEDCCLSIEESLNSVYRQGRVSDKSIGPLEIKLVESGTFDKLMDYALSQGASINQYKTPRCVKYAPII 577 (609)
Q Consensus 499 ~~-~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~ 577 (609)
+. +...++++++++||..||++||++|+.+|.++|+|+|++|++|++|+|++|+++++++|+++||||+|||+++++++
T Consensus 494 ~~~~~~~~~~~~l~~~~~~LD~~LN~~Y~~~R~~~~~L~pl~v~~v~~GtF~~~~~~~~~~G~~~gQ~K~PR~~~~~~~~ 573 (609)
T 4b2g_A 494 VKDSANSPSDELLGQCCLAMEESLNSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAISRGASINQYKVPRCVNFTPIM 573 (609)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHSCHHHHHHHHTSCCSCCCEEEEECTTCSCC----------------CCSSCC--CCH
T ss_pred cccccCCCCHHHHHHHHHHHHHHhCHHHHHHhhcCCccCCcEEEEeCCCcHHHHHHHHHhCCCCCCCcCCCcccCCHHHH
Confidence 41 11234668999999999999999999999777799999999999999999999999999999999999999999999
Q ss_pred HHHhcccccccccCCCCCCCCCcccc
Q 046696 578 ELLNSKVVSNYFSPKCPKWVPGQKQW 603 (609)
Q Consensus 578 ~~L~~~~~~~~~~~~~~~~~~~~~~~ 603 (609)
++|+++||++|+|+++|.|+|.+.++
T Consensus 574 ~~L~~~v~~~~~s~~~~~~~~~~~~~ 599 (609)
T 4b2g_A 574 ELLDSRVVSSHFSPALPHWTPARRRA 599 (609)
T ss_dssp HHHHTTEEEEEECCSCCCCCSCCC--
T ss_pred HHHHhcccccccCCCCCCCCcccchh
Confidence 99999999999999999999987765
No 2
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=100.00 E-value=1.1e-128 Score=1079.27 Aligned_cols=561 Identities=50% Similarity=0.892 Sum_probs=473.2
Q ss_pred cccHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCChHHHhhCCCCCCChHhHhhhCCCCChhchhHHHHHHhcCCCCCcc
Q 046696 20 DNNKKALKFIESVTSQADEVQDRVLAEILSCSANVEYLQRYGLNGHVDKGTFKKVMPVITYEDLKPYVDRIANGDCSPIL 99 (609)
Q Consensus 20 ~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yedl~p~ier~~~Ge~~~vl 99 (609)
+.+++.++.||+.++++.++|+++|++||+.|++|+|||+| |++|+|++||+++|||++|||++|||||+++||.++||
T Consensus 12 ~~~~~~~~~~e~~~~~~~~vQ~~vL~~iL~~n~~Teygk~~-f~~i~~~~~F~~~VPi~~Yedl~pyIeRi~~Ge~~~iL 90 (581)
T 4eql_A 12 DINETFEKQLKDLTSNVKSIQDNLLEEIITPNTKTEYLQRF-LIDRFDKELFKKNVPIVSYEDIKPYLDRVVNGESSDVI 90 (581)
T ss_dssp --CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTTSHHHHHT-TCCSCCHHHHHHHSCCBCHHHHHHHHHHHHTTCCGGGT
T ss_pred CCcHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccCHHHHHH-hhcCCCHHHHHHhCCCccHHHHHHHHHHHHcCCCCccc
Confidence 56778899999999999999999999999999999999999 99999999999999999999999999999999977999
Q ss_pred cCCCcceeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeecccccc
Q 046696 100 CSQPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTSY 179 (609)
Q Consensus 100 ~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 179 (609)
|++|+.+|++|||||||++|+||+|+++++.+..++++|..++++.+|.++.||.|++++......|++|+|+|++|+.+
T Consensus 91 ~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~~~~~~~~~~~~~~~~~p~~~~Gk~l~l~~~~~~~~t~~G~~~g~~s~~~ 170 (581)
T 4eql_A 91 SARTITGFLLSSGTSGGAQKMMPWNNKYLDNLTFIYDLRMQVITKHVKGVEEGKGMMFLFTKQESMTPSGLPARVATSSY 170 (581)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCSCTTSEEEECCCCCCCEECTTSCEEECHHHHH
T ss_pred CCCCCCeEEeCCCCCCCCccccccCHHHHHHHHHHHHHHHHHHHhcCCccccCCEEEEeccCCcccCCCCeeecccchhh
Confidence 99999999999999999999999999999998888999999999989988889999998777778899999999999999
Q ss_pred ccccccCCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHHHHccc
Q 046696 180 YKSSLFKDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCNDIRKGT 259 (609)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt 259 (609)
+++.+|+++|.+|...|++|.+++.++|..|++||||||||.++++|++|+++|+++++++++.|+++|+++|+||++|+
T Consensus 171 ~~~~~f~~~p~~~~~~~~~P~~~i~~~d~~~~~Y~~ll~~L~~~~~v~~isa~fa~~ll~~~~~L~~~weel~~dI~~gt 250 (581)
T 4eql_A 171 FKSDYFKNRPSNWYYSYTSPDEVILCPNNTESLYCHLLCGLVQRDEVVRTGSIFASVMVRAIEVLKNSWEELCSNIRSGH 250 (581)
T ss_dssp HTSHHHHTCCCSGGGCBSSCHHHHHCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhcchhhcccchhhhcccCchHhhcCCCHHHHHHHHHHHHhhcccccceeeehhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHhhcC-cCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCccchHHHHhhhcCCCCeeccc
Q 046696 260 IDPKITDPSVREAVLKILK-PNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTMSQYIPTLDYYSNGLPLVCTM 338 (609)
Q Consensus 260 ~~~~i~~~~~r~~l~~~l~-p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~~~y~~~l~~~~~g~~~~~~~ 338 (609)
++++++++++|++|.+.|+ |||++|++|++.|.+.+|.|++++|||||++|.||++|||.+|++++++++||+|+++.+
T Consensus 251 l~~~it~~~~r~~~~~~L~~P~p~~A~~l~~~~~~~~~~g~i~~lWPnl~~l~~~~~G~~~~Y~~~l~~~~g~~p~~~~~ 330 (581)
T 4eql_A 251 LSNWVTDLGCQNSVSLVLGGPRPELADTIEEICNQNSWKGIVKRLWPNTKYIETVVTGSMGQYVPMLNYYCNDLPLVSTT 330 (581)
T ss_dssp CCTTCCCHHHHHHHHHHHCSCCHHHHHHHHHHHTSSCCTTHHHHHSTTCCEEEEECSGGGGGGHHHHHHHHTTCCEECCE
T ss_pred CcccCcChHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCccccCc
Confidence 9999999999999999998 999999999999998778899999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeeccceeeee
Q 046696 339 YASSECYFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTYAGLYRYR 418 (609)
Q Consensus 339 YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~~GlyRYr 418 (609)
|+||||++|+|++|.|+|+..+|+|+|+.+||||||+++. +++++++++|||+|++|||||||.+||||||
T Consensus 331 Y~ASEg~~gi~~~p~~~~~~~~~~L~~~~~ffEFip~~~~---------~~~~~v~l~eVe~G~~YelViTt~~GL~RYr 401 (581)
T 4eql_A 331 YGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDGG---------DKNDVVDLEDVKLGCTYEPVVTNFAGLYRMR 401 (581)
T ss_dssp EECSSCEEEECSCTTSCGGGCCEEECTTSSEEEEEECSTT---------CCSSCEEGGGCCTTCEEEEEEECSSSCCSEE
T ss_pred cccccceeeeccCCCCCcccCceeecCCcEEEEEEecccc---------CCCcEeCHHHcCCCceEEEEEeeccceeeEE
Confidence 9999999999999999987789999999999999998764 2478999999999999999999999999999
Q ss_pred cCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEe
Q 046696 419 VGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPGRYVLFWEIS 498 (609)
Q Consensus 419 ~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~~ 498 (609)
+||+|+|+||++++|+|+|+||.+++||++||||++++|++||.+|++.|+++|++|.|||+++|.++.||||+||||++
T Consensus 402 ~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v~~al~~a~~~l~~~g~~l~eft~~~~~~~~p~Hy~~~wel~ 481 (581)
T 4eql_A 402 VGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAVSQAKLVLESSGLDLKDFTSYADTSTFPGHYVVYLEVD 481 (581)
T ss_dssp CCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHHHHHHHHC--------------CEEEECSSSSBEEEEECC--
T ss_pred cCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHHHHHHHHHHHhhhhcCCEEEEEEEecCCCCCCCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999998777778999999999999888899999999997
Q ss_pred eCC-------CCCCChhhHHHHHHHHHHHhChHhHhhccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCCCCCccc
Q 046696 499 QSG-------ATQIPPSVFEDCCLSIEESLNSVYRQGRVSDKSIGPLEIKLVESGTFDKLMDYALSQGASINQYKTPRCV 571 (609)
Q Consensus 499 ~~~-------~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~ 571 (609)
+.+ ...++++++++||..||++||++|+.+|.++|+|+||+|++|++|+|++|+++++++|+++||||+|||+
T Consensus 482 ~~~~~~~~~~~~~~~~~~l~~~~~~LD~~LN~~Y~~~R~~~~~L~pl~i~~v~~GtF~~~~~~~~~~G~~~gQ~K~PR~~ 561 (581)
T 4eql_A 482 TKEGEEKETAQFELDEEALSTCCLVMEESLDNVYKRCRFKDGSIGPLEIRVVRQGTFDSLMDFFISQGASTGQYKTPRCI 561 (581)
T ss_dssp -------------CCHHHHHHHHHHHHHTSCHHHHHHHHTTCCBCCCEEEC-----------------------------
T ss_pred cccccccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCcEEEEeCCCcHHHHHHHHHhCCCCCCCcCCCccc
Confidence 511 1224557899999999999999999999777899999999999999999999999999999999999999
Q ss_pred CCHhHHHHHhccccccccc
Q 046696 572 KYAPIIELLNSKVVSNYFS 590 (609)
Q Consensus 572 ~~~~~~~~L~~~~~~~~~~ 590 (609)
++++++++|+++|+++|+|
T Consensus 562 ~~~~~~~~L~~~v~~~~~s 580 (581)
T 4eql_A 562 KSGKALQVLETCVVAKFFS 580 (581)
T ss_dssp ---------------CEEC
T ss_pred CCHHHHHHHHhcchheeec
Confidence 9999999999999999997
No 3
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=100.00 E-value=6.4e-128 Score=1070.47 Aligned_cols=563 Identities=39% Similarity=0.709 Sum_probs=519.8
Q ss_pred cccccHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCChHHHhhCCCCC-CChH-hHhhhCCCCChhchhHHHHHHhcCCC
Q 046696 18 VSDNNKKALKFIESVTSQADEVQDRVLAEILSCSANVEYLQRYGLNGH-VDKG-TFKKVMPVITYEDLKPYVDRIANGDC 95 (609)
Q Consensus 18 ~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i-~s~e-dF~~~vPl~~Yedl~p~ier~~~Ge~ 95 (609)
....+++.++.||+.++|+.++|+++|++||+.|++|+|||+|||++| +|++ ||+++|||++|||++|||||+++||.
T Consensus 12 ~~~~~~~~~~~~e~~~~~~~~vQ~~vL~~iL~~n~~Teygk~~gf~~i~~~~e~dF~~~VPi~~Yedl~pyIeRi~~Ge~ 91 (581)
T 4epl_A 12 ETFDMNRVIDEFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATDPEEAFKSMVPLVTDVELEPYIKRMVDGDT 91 (581)
T ss_dssp -CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCHHHHTTTCC----CHHHHHHHHSCCBCHHHHHHHHHHHHTTCC
T ss_pred cccccHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCHHHHhcCCCcccCCHHHHHHHhCCCccHHHHHHHHHHHHCCCC
Confidence 346788889999999999999999999999999999999999999999 9999 99999999999999999999999997
Q ss_pred CCcccCCCcceeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCC-CCceEEEEeccccccCCCCeeeec
Q 046696 96 SPILCSQPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLD-KGKAMYFLFIKSEAKTPGGLVARP 174 (609)
Q Consensus 96 ~~vl~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~-~gk~l~~~~~~~~~~t~~Gip~g~ 174 (609)
++|||++|+.+|++|||||+|++|+||+|+++++.+..++.++..++++ +|.++ .||.|+|.+++.+..|++|+|+|+
T Consensus 92 ~~iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~~~~~~~~~~~~~~~-~p~l~~~Gk~L~l~~~s~~~~t~~Gi~~G~ 170 (581)
T 4epl_A 92 SPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNR-DFPIDDNGKALQFIFSSKQYISTGGVPVGT 170 (581)
T ss_dssp SSSSSSSCCSEEEEEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHH-HSCCCTTCEEEEECCCCCCEECTTSCEEEC
T ss_pred CCccCCCCcceEEecCCCCCCCccccccCHHHHHHHHHHHHHHHHHHhh-CCccccCCcEEEEeecCCcccCCCCceeee
Confidence 7999999999999999999999999999999999987778888777776 68888 899999888888889999999999
Q ss_pred cccccccccccCCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHH
Q 046696 175 VLTSYYKSSLFKDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCND 254 (609)
Q Consensus 175 ~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~d 254 (609)
+|+.+++|.+|+++|..+...|++|.+++.++|..+++||||||||.++++|.+|+++|+++|+++++.|+++|+++|+|
T Consensus 171 ~S~~~~~s~~f~~~p~~~~~~~t~P~e~i~~~D~~~~~Y~~Ll~~L~~~~~v~~i~a~fas~ll~~~~~l~~~We~l~~d 250 (581)
T 4epl_A 171 ATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTD 250 (581)
T ss_dssp HHHHHHTSTTHHHHHGGGSCCBSSCHHHHTCSCHHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhcchhhcCchhhhhcccCCHHHhcCCCHHHHHHHHHHHhhhccccccEEeeccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888988866677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccCCCCCCChhhHHHHHhhcCcCHHHHHHHHHHhccc-cccccccccCCCCceeeEEEecCccchHHHHhhhcCCCC
Q 046696 255 IRKGTIDPKITDPSVREAVLKILKPNTQLADFIEAECSKE-SWKGIITRLWPNTKYIDVIVTGTMSQYIPTLDYYSNGLP 333 (609)
Q Consensus 255 I~~gt~~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~-~~~g~~~~lWP~l~~l~~~~~G~~~~y~~~l~~~~~g~~ 333 (609)
|++|+++++++++++|.+++++++|+|++|++|++.|.+. +|.|++++|||||++|.||++|+|.+|++++++++|++|
T Consensus 251 I~~gtl~~~it~~~~R~~l~~v~~p~~~~a~~l~~~~~~~~~~~g~i~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~p 330 (581)
T 4epl_A 251 IKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCMSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLP 330 (581)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTTCCCCHHHHHHHHHHHHHSSTTTTHHHHHCTTCCCEEEECSGGGGGGHHHHHHHHTTSC
T ss_pred HHhcCCCcCCCCHHHHHHHhCCCCCCHHHHHHHHHHhCCCCccccCHHHhCCCCceEEEEeCCChHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999886 699999999999999999999999999999999999999
Q ss_pred eeccccccccccccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeeccc
Q 046696 334 LVCTMYASSECYFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTYAG 413 (609)
Q Consensus 334 ~~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~~G 413 (609)
+++.+|+||||++|+|++|.|+|+..+|+|+|+.+||||||+++.+ .+++++|+++||++|++|||||||.+|
T Consensus 331 ~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~p~~~ffEFiP~~~~~-------~~~~~~v~l~eve~G~~YelviTt~~G 403 (581)
T 4epl_A 331 LVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETG-------EGEEKPVGLTQVKIGEEYEVVITNYAG 403 (581)
T ss_dssp EEECCEEETTEEEEECCCTTSCTTTCCEEECTTSCEEEEEEC--------------CCCEEGGGCCTTCEEEEEEESTTS
T ss_pred cccCceeccceeeeeecCCCCCccccceeecCCcEEEEEEeccccc-------CCCCceeeHHHcCCCCeEEEEEeeccc
Confidence 9999999999999999999999888899999999999999988654 346789999999999999999999999
Q ss_pred eeeeecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEE
Q 046696 414 LYRYRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPGRYVL 493 (609)
Q Consensus 414 lyRYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l 493 (609)
|||||+||+|+|+||++++|+|+|+||.+++||++||||++++|+.||.+|++.|+++|+.|.|||+++|.++.||||+|
T Consensus 404 L~RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v~~al~~a~~~l~~~~~~l~eft~~~d~~~~p~hyv~ 483 (581)
T 4epl_A 404 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHYAI 483 (581)
T ss_dssp CSSEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHHHHHHHHTTTCCEEEEEEEEECSSSSCEEEE
T ss_pred eeeEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHHHHHHHHHHHhhcccCCeEEEEEEecCCCCCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999988776789999999999988888999999
Q ss_pred EEEEeeCCCCCCChhhHHHHHHHHHHHh-ChHhHhhccCCCccCCeEEEEcCCccHHHHHHHHHhcCCCCCCCCCCccc-
Q 046696 494 FWEISQSGATQIPPSVFEDCCLSIEESL-NSVYRQGRVSDKSIGPLEIKLVESGTFDKLMDYALSQGASINQYKTPRCV- 571 (609)
Q Consensus 494 ~~E~~~~~~~~~~~~~l~~~~~~ld~~L-n~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~- 571 (609)
|||++. . .+.+.+++||..||++| |++|+.+| +.|+|+|++|++|++|+|++|+++++++|+++||||+|||+
T Consensus 484 ~wE~~~---~-~~~~~l~~~~~~Ld~~L~n~~Y~~~R-~~~~L~pl~v~~v~~G~F~~l~~~~~~~G~~~~Q~K~PR~~~ 558 (581)
T 4epl_A 484 FWEISG---E-TNEDVLQDCCNCLDRAFIDAGYVSSR-KCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVK 558 (581)
T ss_dssp EEEESS---C-CCHHHHHHHHHHHHHHCCCHHHHHHH-HHTSSCCCEEEEECTTHHHHHHHHHHTTC------CCCSSCC
T ss_pred EEeecC---C-CCHHHHHHHHHHHHHHhCChhHHHHH-hcCCCCCcEEEEeCcchHHHHHHHHHhCCCCCCCcCCCeeec
Confidence 999852 2 45578999999999999 99999999 56799999999999999999999999999999999999999
Q ss_pred -CCHhHHHHHhcccccccccCCC
Q 046696 572 -KYAPIIELLNSKVVSNYFSPKC 593 (609)
Q Consensus 572 -~~~~~~~~L~~~~~~~~~~~~~ 593 (609)
++++++++|+++|+++|+|+++
T Consensus 559 ~~~~~~~~~L~~~v~~~~~s~~~ 581 (581)
T 4epl_A 559 PSNAKVLQILCENVVSSYFSTAF 581 (581)
T ss_dssp TTCHHHHHHHHTTEEEEEECCCC
T ss_pred CCCHHHHHHHHhcccccccCCCC
Confidence 9999999999999999999875
No 4
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.92 E-value=5.1e-24 Score=231.24 Aligned_cols=389 Identities=16% Similarity=0.150 Sum_probs=228.4
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHhccCChHHHhh----CCC--CCCChHhHhhhCCCCChhchhHHHHHHhcCCCCCccc
Q 046696 28 FIESV-TSQADEVQDRVLAEILSCSANVEYLQRY----GLN--GHVDKGTFKKVMPVITYEDLKPYVDRIANGDCSPILC 100 (609)
Q Consensus 28 ~~e~~-~~~~~~~Q~~~L~~iL~~~~~T~ygr~~----gf~--~i~s~edF~~~vPl~~Yedl~p~ier~~~Ge~~~vl~ 100 (609)
.+|.+ .++.++.|.+.|+++++...+++|||++ |+. +|.+++|+. ++|++++++++.... .+. .-..
T Consensus 10 ~~e~~~~~~~~~~q~~~L~~~l~~~~~~p~y~~~~~~~g~~~~~i~~~~dl~-~lP~~~~~~l~~~~p---~~~--~~~~ 83 (436)
T 3qov_A 10 EIEIMSREKLQELQLQRLKKTINIAANSPYYKEVFSKNGITGDSIQSLDDIR-KIPFTTKSDMRANYP---FGL--VAGD 83 (436)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCTTSCSSSGGGG-GSCCBCHHHHHHTTT---TTT--CCSC
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCC---Ccc--ccCC
Confidence 34555 6788999999999999977999999964 654 689999996 899999999975331 121 1112
Q ss_pred C-CCcceeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeecccccc
Q 046696 101 S-QPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTSY 179 (609)
Q Consensus 101 ~-~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 179 (609)
. +.+.++..||||| |+||-++.|++.+......... .+. . .++..+..+... .+. +.-.|..
T Consensus 84 ~~~~~a~i~~TSGTT-G~PK~v~~th~~~~~~~~~~~~---~~~-~-~~~~~~d~~~~~--~~~-----~~~~~~~---- 146 (436)
T 3qov_A 84 MKRDGVRIHSSSGTT-GNPTVIVHSQHDLDSWANLVAR---CLY-M-VGIRKTDVFQNS--SGY-----GMFTGGL---- 146 (436)
T ss_dssp HHHHEEEEEECSCSS-SCCCEEEEEHHHHHHHHHHHHH---HHH-H-TTCCTTSEEEEC--SCC-----TTCHHHH----
T ss_pred CcCCeEEEEECCCcC-CCCeEEEECHHHHHHHHHHHHH---HHH-H-cCCCCCCEEEEC--ccc-----ccchhHH----
Confidence 2 3455788999999 8999999999977543221110 110 1 122223322211 100 0000000
Q ss_pred ccccccCCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHHHHccc
Q 046696 180 YKSSLFKDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCNDIRKGT 259 (609)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt 259 (609)
...+..+..+.. +.... .+ +-+.+++.|++.
T Consensus 147 ------------------------------~~~~~~l~~G~~----~~~~~-~~-------------~~~~~~~~i~~~- 177 (436)
T 3qov_A 147 ------------------------------GFQYGAERLGCL----TVPAA-AG-------------NSKRQIKFISDF- 177 (436)
T ss_dssp ------------------------------HHHHHHHHHTCE----EECCC-SC-------------CHHHHHHHHHHH-
T ss_pred ------------------------------HHHHHHHHcCCE----EEeCC-CC-------------CHHHHHHHHHHH-
Confidence 001111211110 10000 11 112334444443
Q ss_pred CCCCCCChhhHHHHHhhcCcCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeec
Q 046696 260 IDPKITDPSVREAVLKILKPNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVC 336 (609)
Q Consensus 260 ~~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~ 336 (609)
+++...+ .|..+..|.+...+.+. ..-+++ ++.+++||. ...++.+++.+ |++++
T Consensus 178 ---~~t~~~~----------~P~~~~~l~~~~~~~~~----~~~~~~---lr~i~~gGe~l~~~~~~~~~~~~-g~~v~- 235 (436)
T 3qov_A 178 ---KTTALHA----------IPSYAIRLAEVFQEEGI----DPRETT---LKTLVIGAEPHTDEQRRKIERML-NVKAY- 235 (436)
T ss_dssp ---TCCEEEC----------CHHHHHHHHHHHHHTTC----CTTSSS---CCEEEEESSCCCHHHHHHHHHHH-TSEEE-
T ss_pred ---CCCEEEE----------CHHHHHHHHHHHHHcCC----CcccCC---ccEEEEeCCcCCHHHHHHHHHHh-CccEE-
Confidence 2332222 67777777666554321 111334 678788874 45778888888 89999
Q ss_pred cccccccc-cccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeec----
Q 046696 337 TMYASSEC-YFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTY---- 411 (609)
Q Consensus 337 ~~YgaSEg-~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~---- 411 (609)
+.||+||+ ..++... |+ ...++++......+|++++++. ..|++|+.|||+|++.
T Consensus 236 ~~YG~TE~~~~~~~~~--~~-~~~g~~~~~~~~~v~i~d~~~g-----------------~~~~~g~~Gel~v~~~~~~~ 295 (436)
T 3qov_A 236 NSFGMTEMNGPGVAFE--CQ-EQNGMHFWEDCYLVEIIDPETG-----------------EPVPEGEIGELVLTTLDREM 295 (436)
T ss_dssp EEEEEGGGTEEEEEEE--CT-TCSSEEECTTTEEEEEECTTTC-----------------SBCSTTCCEEEEEEESSCCS
T ss_pred ecCcchhhcCCeeEEe--cC-CCCeeEEccCceEEEEEECCCC-----------------CCCCCCCceEEEEeccCcCC
Confidence 99999997 3323222 22 2346666555667888875432 2467899999999873
Q ss_pred cceeeeecCCEEEEecccCC------CCEE-EEEeecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecC
Q 046696 412 AGLYRYRVGDILKVAGFKNK------APQF-NFVCRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADT 484 (609)
Q Consensus 412 ~GlyRYr~GDvv~v~gf~~~------~P~i-~f~gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~ 484 (609)
....||+|||+++++. .+ .|++ .|+||.+|+|+++|++|++.+||++|.+. .++.- .+.+..+.
T Consensus 296 ~~~~~y~TGDl~~~~~--~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~------p~v~~-~~vv~~~~ 366 (436)
T 3qov_A 296 MPLIRYRTRDLTRILP--GKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQF------PELGS-NYLITLET 366 (436)
T ss_dssp SCCCSEEEEEEECEEC--SCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTTC------TTEEE-EEEEEEEE
T ss_pred ceEEEEEcCCEEEEcC--CCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHHHhC------cCcCC-cEEEEEEc
Confidence 2366899999999985 33 3445 99999999999999999999999999652 23220 22222222
Q ss_pred CCCCceEEEEEEEeeCCCCCCChhhHHHHHHHHHHHhChHhHhhccCCCccCCeEEEEcCCccHHH
Q 046696 485 STIPGRYVLFWEISQSGATQIPPSVFEDCCLSIEESLNSVYRQGRVSDKSIGPLEIKLVESGTFDK 550 (609)
Q Consensus 485 ~~~p~~Y~l~~E~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~iv~~gtF~~ 550 (609)
.......++++++. . ....+....+++.+.+.+.|.. |. --|..|.+|..+.+.+
T Consensus 367 ~~~~~~l~a~v~~~-~-~~~~~~~~~~~l~~~l~~~l~~-~~--------~~p~~i~~v~~~~lP~ 421 (436)
T 3qov_A 367 VNNQDEMIVEVELS-D-LSTDNYIELEKIRRDIIRQLKD-EI--------LVTPKVKLVKKGSLPQ 421 (436)
T ss_dssp ETTEEEEEEEEEEC-T-TCCCCHHHHHHHHHHHHHHHHH-HH--------SSCCEEEEECTTCCC-
T ss_pred CCCCcEEEEEEEEc-C-ccccchhhHHHHHHHHHHHHHH-hc--------CCceEEEEeCCCcccC
Confidence 11223555777775 2 2111112234445555555532 10 2345789999887774
No 5
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.91 E-value=5.1e-23 Score=223.43 Aligned_cols=318 Identities=16% Similarity=0.153 Sum_probs=195.4
Q ss_pred HhhHHHHHHHHHHHHHHhc-cCChHHHhh----CC--CCCCChHhHhhhCCCCChhchhHHHHHHhcCCCCCcccCCCcc
Q 046696 33 TSQADEVQDRVLAEILSCS-ANVEYLQRY----GL--NGHVDKGTFKKVMPVITYEDLKPYVDRIANGDCSPILCSQPIS 105 (609)
Q Consensus 33 ~~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf--~~i~s~edF~~~vPl~~Yedl~p~ier~~~Ge~~~vl~~~pi~ 105 (609)
.++.++.|.+.|+.+|++. ++++||+++ |+ .++.+++||. ++|+++|++++... ..+- .....+.+.
T Consensus 20 ~~~~~~~~~~~l~~~l~~a~~~~~~y~~~~~~~~~~~~~i~~~~dl~-~lP~~~~~~l~~~~---~~~~--~~~~~~~~~ 93 (437)
T 2y27_A 20 RDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDLKTLADLS-RFPFTTKGDLRDSY---PFGM--FAVPQDRIS 93 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGCSSGGGGG-GSCCBCHHHHHHTT---TTTT--CSSCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcC---CCcc--ccCChhHeE
Confidence 4668899999999999975 899999975 44 3588999996 89999999986432 1111 122344556
Q ss_pred eeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeecccccccccccc
Q 046696 106 EFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTSYYKSSLF 185 (609)
Q Consensus 106 ~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~~ 185 (609)
++..||||| |+||-+++|++.+.......... .. . -++..+..+... . |.+.....
T Consensus 94 ~i~~TSGTT-G~PK~v~~t~~~~~~~~~~~~~~---~~-~-~~~~~~d~~~~~-~----------~~~~~~~~------- 149 (437)
T 2y27_A 94 RIHASSGTT-GKPTVVGYTAADIDTWANLVARS---IR-A-AGARRGDKVHVS-Y----------GYGLFTGG------- 149 (437)
T ss_dssp EEEECCCTT-SSCCEEEECHHHHHHHHHHHHHH---HH-H-TTCCTTCEEEEC-S----------CCSSSHHH-------
T ss_pred EEEECCCCC-CCceEEecCHHHHHHHHHHHHHH---HH-H-cCCCCCCEEEEc-c----------cccccccc-------
Confidence 788999999 89999999999875543221111 00 1 112223322211 0 11000000
Q ss_pred CCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHHHHcccCCCCCC
Q 046696 186 KDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCNDIRKGTIDPKIT 265 (609)
Q Consensus 186 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt~~~~i~ 265 (609)
....+..++.+. .+-.+. .+ +.+.+++.|++. +++
T Consensus 150 -----------------------~~~~~~~~~~G~----~~~~~~-~~-------------~~~~~~~~i~~~----~~t 184 (437)
T 2y27_A 150 -----------------------LGAHYGAERAGL----TVIPFG-GG-------------QTEKQVQLIQDF----RPD 184 (437)
T ss_dssp -----------------------HHHHHHHHHTTC----EEECCC-SC-------------CHHHHHHHHHHH----CCS
T ss_pred -----------------------hHHHHHHHHcCC----EEEeCC-CC-------------CHHHHHHHHHHh----CCC
Confidence 000111111111 010000 00 223444445544 233
Q ss_pred ChhhHHHHHhhcCcCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccc
Q 046696 266 DPSVREAVLKILKPNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASS 342 (609)
Q Consensus 266 ~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaS 342 (609)
...+ .|..+..|.+...+.+. ..-+++ ++.+++||. ...++.+++.+ |++++ +.||+|
T Consensus 185 ~l~~----------~Ps~~~~l~~~~~~~~~----~~~~~~---lr~i~~gGe~l~~~~~~~~~~~~-g~~v~-~~YG~T 245 (437)
T 2y27_A 185 IIMV----------TPSYMLSIADEIERQGL----DPVQSS---LRIGIFGAEPWTNDMRVAIEQRM-GIDAV-DIYGLS 245 (437)
T ss_dssp EEEE----------CHHHHHHHHHHHHHTTC----CGGGSS---CCEEEEESSCCCHHHHHHHHHHH-TSEEE-EEEEET
T ss_pred EEEE----------CHHHHHHHHHHHHHcCC----CcccCC---eeEEEEcCccCCHHHHHHHHHHH-CcCEE-ecCCch
Confidence 2222 67777777665543311 111345 567777774 45778888888 89999 999999
Q ss_pred cc-cccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeeccc----eeee
Q 046696 343 EC-YFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTYAG----LYRY 417 (609)
Q Consensus 343 Eg-~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~~G----lyRY 417 (609)
|+ ..++.. .|+....++++.....++|++++++. ..|++|+.|||+||+... +.||
T Consensus 246 E~~g~~~~~--~~~~~~~g~~~~~~~~~~~i~d~~~g-----------------~~~~~g~~Gel~v~~~t~~~~~~~~y 306 (437)
T 2y27_A 246 EVMGPGVAS--ECVETKDGPTIWEDHFYPEIIDPETG-----------------EVLPDGELGELVFTSLTKEALPIIRY 306 (437)
T ss_dssp TTTEEEEEE--CCTTTCSSCEECTTTEEEEEECTTTC-----------------CBCCTTCCEEEEEEESSCSSSCCCSE
T ss_pred hhcCCeeEE--ecCCCCCceeEccCceEEEEEcCCCC-----------------CCCCCCCccEEEEecCCcCCchhhee
Confidence 95 322221 12221225666546678898886532 146789999999997432 6799
Q ss_pred ecCCEEEEeccc-CCCCEE-EEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 418 RVGDILKVAGFK-NKAPQF-NFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 418 r~GDvv~v~gf~-~~~P~i-~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+|||+++++... ...|+| .|+||.+|+|+++|++|++.+||++|.+
T Consensus 307 ~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~ 354 (437)
T 2y27_A 307 RTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLK 354 (437)
T ss_dssp EEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTT
T ss_pred ecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHh
Confidence 999999998421 135667 8999999999999999999999999965
No 6
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.91 E-value=8.2e-23 Score=222.16 Aligned_cols=318 Identities=15% Similarity=0.108 Sum_probs=194.6
Q ss_pred HhhHHHHHHHHHHHHHHhc-cCChHHHhh----CC--CCCCChHhHhhhCCCCChhchhHHHHHHhcCCCCCcccCCCcc
Q 046696 33 TSQADEVQDRVLAEILSCS-ANVEYLQRY----GL--NGHVDKGTFKKVMPVITYEDLKPYVDRIANGDCSPILCSQPIS 105 (609)
Q Consensus 33 ~~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf--~~i~s~edF~~~vPl~~Yedl~p~ier~~~Ge~~~vl~~~pi~ 105 (609)
.++.++.|.+.|+++|++. ++++||+++ |+ .+|++++||+ ++|+++|++++... ..+. .....+.+.
T Consensus 22 ~~~~~~~q~~~l~~~l~~a~~~~~~y~~~~~~~~~~~~~i~~~~dl~-~lP~~~~~~l~~~~---p~~~--~~~~~~~~~ 95 (443)
T 2y4o_A 22 RDELQALQLERLKWSLRHAYDNVPHYRRTFDAAGVHPDDLKSLADLA-KFPFSTKNDLRDNY---PFGL--FAVPREQVV 95 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGCCSGGGGG-GSCCBCHHHHHTTT---TTTT--CSSCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHHhhC---CCcc--cCCChhheE
Confidence 5678899999999999975 899999975 54 4689999996 89999999997543 1111 122345556
Q ss_pred eeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeecccccccccccc
Q 046696 106 EFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTSYYKSSLF 185 (609)
Q Consensus 106 ~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~~ 185 (609)
++..||||| |+||.+++|++.+.......... .. .+ ++..+..+... . |++.....
T Consensus 96 ~i~~TSGTT-G~PK~v~~t~~~~~~~~~~~~~~---~~-~~-~~~~~d~~l~~--~---------~~~~~~~~------- 151 (443)
T 2y4o_A 96 RVHASSGTT-GKPTVVGYTARDIDTWANVTARS---IR-AA-GGRPGDTLHNA--F---------GYGLFTGG------- 151 (443)
T ss_dssp EEEEECCSS-SSCEEEEECHHHHHHHHHHHHHH---HH-HT-TCCTTCEEEEC--S---------CCSSSHHH-------
T ss_pred EEEECCCCC-CCceEEecCHHHHHHHHHHHHHH---HH-Hc-CCCCCCEEEEe--c---------cCcccccH-------
Confidence 788999999 89999999999875543221111 00 11 12223322211 1 11100000
Q ss_pred CCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHHHHHHHHHHHhhHHHHHHHHHcccCCCCCC
Q 046696 186 KDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASGFIRAIRFLEKHWPLLCNDIRKGTIDPKIT 265 (609)
Q Consensus 186 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~gt~~~~i~ 265 (609)
....+..++++.. +..+. .+ +.+.+++.|++. +++
T Consensus 152 -----------------------~~~~~~~~~~G~~----~~~~~-~~-------------~~~~~~~~i~~~----~~t 186 (443)
T 2y4o_A 152 -----------------------LGIHYGAERLGCM----VVPMS-GG-------------QTEKQVQLIRDF----EPK 186 (443)
T ss_dssp -----------------------HHHHHHHHHHTCE----EECCC-SC-------------CHHHHHHHHHHH----CCS
T ss_pred -----------------------HHHHHHHHHcCCE----EEECC-CC-------------CHHHHHHHHHHh----CCc
Confidence 0001111111110 10000 01 223344444443 233
Q ss_pred ChhhHHHHHhhcCcCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccc
Q 046696 266 DPSVREAVLKILKPNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASS 342 (609)
Q Consensus 266 ~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaS 342 (609)
...+ .|..+..|.+...+.+. ..-+++ ++.+++||. ...++.+++.+ |++++ +.||+|
T Consensus 187 ~l~~----------~Ps~~~~l~~~~~~~~~----~~~~~~---lr~i~~gGe~l~~~~~~~~~~~~-g~~v~-~~YG~T 247 (443)
T 2y4o_A 187 IILV----------TPSYMLNLIDEMVRQGM----DPAESS---LKIGIFGAEPWTQALRNEVETRV-GIDAL-DIYGLS 247 (443)
T ss_dssp EEEE----------CHHHHHHHHHHHHHTTC----CGGGSS---CCEEEEESSCCCHHHHHHHHHHH-TCEEE-EEEEET
T ss_pred EEEE----------CHHHHHHHHHHHHHcCC----CcccCC---ceEEEECCCcCCHHHHHHHHHHh-CcCEE-eccCch
Confidence 2222 67777777665543321 111345 567777774 45778888888 89999 999999
Q ss_pred cc-cccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEeecc----ceeee
Q 046696 343 EC-YFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTTYA----GLYRY 417 (609)
Q Consensus 343 Eg-~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt~~----GlyRY 417 (609)
|+ ..++.. .|+....++++......+|++++++. ..|++|+.|||+||+.. .+.||
T Consensus 248 E~~g~~~~~--~~~~~~~g~~~~~~~~~~~i~d~~~g-----------------~~~~~G~~Gel~v~~~t~~~~p~~~y 308 (443)
T 2y4o_A 248 EVMGPGVAC--ECVETKDGPVIWEDHFYPEIIDPVTG-----------------EVLPDGSQGELVFTSLTKEAMPVIRY 308 (443)
T ss_dssp TTTEEEEEE--ECTTTCCSEEECTTTEEEEEECTTTC-----------------CBCCTTCCEEEEEEESSCSSSCCSSE
T ss_pred hhcCCeEEe--ccCCCCCceEEccCCeEEEEEcCCCC-----------------CCCCCCCceEEEEeCCCcccChhhee
Confidence 95 322221 12221225766545668888875432 14678999999999743 25699
Q ss_pred ecCCEEEEecccC-CCCEE-EEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 418 RVGDILKVAGFKN-KAPQF-NFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 418 r~GDvv~v~gf~~-~~P~i-~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+|||+++++.-.+ ..++| .|+||.+|+|+++|++|++.+||++|.+
T Consensus 309 ~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~ 356 (443)
T 2y4o_A 309 RTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVA 356 (443)
T ss_dssp EEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHT
T ss_pred ecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHh
Confidence 9999999985101 13556 8999999999999999999999999965
No 7
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.68 E-value=2.7e-16 Score=166.59 Aligned_cols=309 Identities=9% Similarity=0.004 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHhc-c---CChHHHhh----CCC---CCCChHhHhhhCCCCChhchhH-HHHHHhcCCCCCcccCCCcc
Q 046696 38 EVQDRVLAEILSCS-A---NVEYLQRY----GLN---GHVDKGTFKKVMPVITYEDLKP-YVDRIANGDCSPILCSQPIS 105 (609)
Q Consensus 38 ~~Q~~~L~~iL~~~-~---~T~ygr~~----gf~---~i~s~edF~~~vPl~~Yedl~p-~ier~~~Ge~~~vl~~~pi~ 105 (609)
..+++.|++++++. + +++|||++ |++ +|++++|++ ++|+++ ++++. +.+.+.. .-+..+.+.
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~p~Yr~~~~~~g~~p~~~i~~~~dl~-~lP~~~-~~l~~~~~~~~~p----~~~~~~~~a 94 (369)
T 3hgu_A 21 NDTNNFVQALMRWHFSKETGSPFWLGMREQLNFDPIKDVKTINDLR-QFSDIS-HCLRQEPVANLVP----QGLPADSHP 94 (369)
T ss_dssp TCHHHHHHHHHHHHHSTTTSCHHHHHHGGGSSSCHHHHCCSTGGGG-GSCCCG-GGGTTSCGGGGSC----TTSCTTCCC
T ss_pred cCHHHHHHHHHHHHcCCCCCCHHHHHHHHhcCCChhHhCCCHHHHh-hCCCch-hhhhcCCHHHcCC----ccCCccccE
Confidence 35788999999975 7 99999964 553 689999995 899999 99875 3332221 012455566
Q ss_pred eeecccccCCCCccccccCHHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEeccccccCCCCeeeecccccccccccc
Q 046696 106 EFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVVDQFVPGLDKGKAMYFLFIKSEAKTPGGLVARPVLTSYYKSSLF 185 (609)
Q Consensus 106 ~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~~ 185 (609)
+...||||| |+||-+.+|++.+....... .... ...++..+..+... . |+|.-..
T Consensus 95 ~i~~TSGTT-G~PKgv~~t~~~~~~~~~~~---~~~~--~~~~~~~~d~~l~~--~---------p~g~~~~-------- 149 (369)
T 3hgu_A 95 QVYESGGTT-GAPKYVVAYDAWIEALISWR---MSGY--QHRPGRPSGNTLAA--I---------PTGPHIV-------- 149 (369)
T ss_dssp EEEEECC----CCEEEEECHHHHHHHHHHH---TTTT--TTSTTCCCCEEEEC--S---------CCTTCHH--------
T ss_pred EEEECCCCC-CCCCEEEECHHHHHHHHHHH---HhhH--HhhCCCCcceEEEe--c---------CCCchhh--------
Confidence 889999999 89999999998765432211 0000 11122223222211 1 1100000
Q ss_pred CCCCCCCCcccCCCcccccCCChhhhHHHHHHhhhccccceeEEeecchHH----H------HHHHHHHHhhHHHHHHHH
Q 046696 186 KDRPFDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQNLQVLRVGAVFASG----F------IRAIRFLEKHWPLLCNDI 255 (609)
Q Consensus 186 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~Ll~~L~~~~~v~~i~~~~~~~----l------l~~~~~l~~~w~~l~~dI 255 (609)
....++. ++.... ..+...+.+. + ...-...+...+++++.|
T Consensus 150 -------------------------g~~~~~~-~~~~G~--~v~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 201 (369)
T 3hgu_A 150 -------------------------GAINKER-ALRLGG--MFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTL 201 (369)
T ss_dssp -------------------------HHHHHHH-HHHTTS--CEECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------hHHHHHH-HHHcCC--EEECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHH
Confidence 0000000 011010 0111111111 0 011111233344555567
Q ss_pred HcccCCCCCCChhhHHHHHhhcCcCHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHh-hhcCC
Q 046696 256 RKGTIDPKITDPSVREAVLKILKPNTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLD-YYSNG 331 (609)
Q Consensus 256 ~~gt~~~~i~~~~~r~~l~~~l~p~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~-~~~~g 331 (609)
++. +++...+ .|..+..|.+..... ....++ ++.+++||. ...+++++ +.||+
T Consensus 202 ~~~----~~t~l~~----------~Ps~~~~l~~~~~~~------~~~~~~---lr~i~~gGe~l~~~~~~~~~~~~~p~ 258 (369)
T 3hgu_A 202 MNQ----DIRFLVT----------TPPVLRELLKRPEVV------LQMKQS---LAQITLGGTELNLDEIKFIASEILPD 258 (369)
T ss_dssp HHS----CEEEEEE----------CHHHHHHHTTCHHHH------HHHHHH---CSEEEEESSCCCHHHHHHHHHHTCTT
T ss_pred HhC----CCCEEEe----------CHHHHHHHHhhhhhh------ccccCC---eeEEEECCccCCHHHHHHHHHHhCCC
Confidence 665 3332222 555555543321110 011223 567777774 46778888 88889
Q ss_pred CCeeccccccccccccccCCCCCCCCCCceeec----cCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEE
Q 046696 332 LPLVCTMYASSECYFGLNLNPMCNPSEVSYTLL----PTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELV 407 (609)
Q Consensus 332 ~~~~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~----~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelv 407 (609)
++++ +.||+||+.... ..|+....|.++. .....++++++++. ..|++|+.|||+
T Consensus 259 ~~v~-~~YG~TE~~~~~---~~~~~~~~G~~~~~~~~~~~~~v~ivD~~~g-----------------~~vp~G~~GEl~ 317 (369)
T 3hgu_A 259 CEFS-ASYGSTSALGVS---RSLLITSESQQVIYDSFSPFITYDVVDSITA-----------------QTVEYGERGNVI 317 (369)
T ss_dssp SEEE-EEEEEGGGTEEE---EECCBCTTCSSCEEECCTTTEEEEEECTTTC-----------------SBCCTTCEEEEE
T ss_pred cEEE-cccCchhhhcce---eccccccCCCcccccCCCCCeEEEEECCCCC-----------------cCCCCCCceEEE
Confidence 9999 999999975322 2232211344432 12245666665322 247799999999
Q ss_pred Eeecc---ceeeeecCCEEEEecccCCC-----CEEEEEeecCeeEeccc
Q 046696 408 VTTYA---GLYRYRVGDILKVAGFKNKA-----PQFNFVCRKNVALSIDS 449 (609)
Q Consensus 408 vTt~~---GlyRYr~GDvv~v~gf~~~~-----P~i~f~gR~~~~l~~~G 449 (609)
||+.. -+.||+|||+++.......- --++.++|.++...+.|
T Consensus 318 vt~l~~~~~l~ry~tgD~~~~~~~~~g~~~d~~~~v~~~~~~~~~~~i~g 367 (369)
T 3hgu_A 318 VTHLSPWAFYPRVAERDTAIRLPGVSGFAGDRLADIEPLKISEGRKVIEG 367 (369)
T ss_dssp EEEEETTEEEEEEEEEEEEEEECCSTTCSSCEEEEEEECC----------
T ss_pred EEEcCcccccccccCCceEEEecCCCCCcCcccccceeccccCCCceeee
Confidence 99832 28999999999876432211 14455666555555544
No 8
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=99.66 E-value=4.4e-15 Score=165.93 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=94.4
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM--CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ...++++++.+|+++++ +.||+||+...+...+. ..+...|.. .|+ .-++++++++.
T Consensus 311 lr~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~~------ 381 (548)
T 2d1s_A 311 LVEIASGGAPLSKEVGEAVARRFNLPGVR-QGYGLTETTSAIIITPEGDDKPGASGKV-VPL-FKAKVIDLDTK------ 381 (548)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHTTCSCCE-EEEECGGGSSEEEECCTTCCCTTCCBEE-CTT-CEEEEECTTTC------
T ss_pred eeEEEEcCccCCHHHHHHHHHHcCCCcee-eccccccccceeeecCcccCCCCCCCcc-CCC-ceEEEEeCCcC------
Confidence 677777774 35667888888888899 99999997543222221 112223332 233 23555553321
Q ss_pred cccccccccccccCCCCCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCEEEEEeecCeeEec
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQFNFVCRKNVALSI 447 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~ 447 (609)
..+++|+.|||+|++ +.||| +|+|||+++++ ..+.+.|+||.+|+|++
T Consensus 382 -----------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~----~dG~l~~~GR~~d~ik~ 446 (548)
T 2d1s_A 382 -----------KSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYD----EEKHFFIVDRLKSLIKY 446 (548)
T ss_dssp -----------CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEEC----TTCCEEEEEEGGGCBCB
T ss_pred -----------ccCCCCCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEc----CCCeEEEeccccceEEE
Confidence 246789999999986 45666 59999999998 46789999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 046696 448 DSDKTDEVELQNAVKN 463 (609)
Q Consensus 448 ~GEkv~e~~v~~av~~ 463 (609)
+|++|++.+||++|.+
T Consensus 447 ~G~~v~p~eIE~~l~~ 462 (548)
T 2d1s_A 447 KGYQVPPAELESVLLQ 462 (548)
T ss_dssp TTCCBCHHHHHHHHHT
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 9
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=99.64 E-value=1.3e-14 Score=163.50 Aligned_cols=128 Identities=18% Similarity=0.304 Sum_probs=93.2
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM--CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ....+++++.+ |++++ +.||+||+.+.+...+. ..++..|.+ .|+. -+++++.+ +
T Consensus 343 lr~i~~gGe~l~~~~~~~~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~p-~~~~-~v~ivd~~--g----- 411 (580)
T 3etc_A 343 LKYAVVAGEPLNPEVFNRFLEFT-GIKLM-EGFGQTETVVTIATFPWMEPKPGSIGKP-TPGY-KIELMDRD--G----- 411 (580)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHH-SCCCE-EEECCTTSSCCEECCTTSCCCTTCCBEE-CTTC-EEEEECTT--S-----
T ss_pred ceEEEEccCCCCHHHHHHHHHHh-CCeEe-cccccccccceeecCCCCCCCCCccccC-CCCC-EEEEECCC--C-----
Confidence 677888884 35567777778 89999 99999998554332221 122233443 2332 34455433 1
Q ss_pred cccccccccccccCCCCCeEEEEEee--------ccceee-------------eecCCEEEEecccCCCCEEEEEeecCe
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT--------YAGLYR-------------YRVGDILKVAGFKNKAPQFNFVCRKNV 443 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt--------~~GlyR-------------Yr~GDvv~v~gf~~~~P~i~f~gR~~~ 443 (609)
.++++|+.|||+|++ +.|||+ |||||+++++ ..+.+.|+||.+|
T Consensus 412 -----------~~~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~d----~dG~l~~~GR~dd 476 (580)
T 3etc_A 412 -----------RLCEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWMD----EDGYLWFVGRADD 476 (580)
T ss_dssp -----------CBCCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEEC----TTSCEEEEEESSS
T ss_pred -----------CCCCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEEC----CCCcEEEEecCCC
Confidence 247789999999985 345663 9999999998 4789999999999
Q ss_pred eEeccccccCHHHHHHHHHH
Q 046696 444 ALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 444 ~l~~~GEkv~e~~v~~av~~ 463 (609)
+|+++|++|++.+||++|.+
T Consensus 477 ~Ik~~G~~I~p~eIE~~l~~ 496 (580)
T 3etc_A 477 IIKTSGYKVGPFEVESALIQ 496 (580)
T ss_dssp CEEETTEEECHHHHHHHHTT
T ss_pred EEEECCEEECHHHHHHHHHh
Confidence 99999999999999999965
No 10
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=99.64 E-value=1.2e-14 Score=160.65 Aligned_cols=133 Identities=16% Similarity=0.193 Sum_probs=93.1
Q ss_pred ccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCC-------CCCCCCCceeeccCceEEE
Q 046696 302 RLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNP-------MCNPSEVSYTLLPTMAYFE 371 (609)
Q Consensus 302 ~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~-------~~~~~~~~~~l~~~~~f~E 371 (609)
...+. ++.+++||. ....+++++.+++++++ +.||+||+...+.... .......|.. .|+. -++
T Consensus 257 ~~~~~---l~~~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~ 330 (511)
T 3e7w_A 257 DLLPH---ADTFMFCGEVLPVSVAKALLERFPKAKIF-NTYGPTEATVAVTSVEITNDVISRSESLPVGFA-KPDM-NIF 330 (511)
T ss_dssp TTCTT---CCEEEECSSCCCHHHHHHHHHHCTTCEEE-ECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEE-CTTC-EEE
T ss_pred ccCCc---ccEEEEecCCCCHHHHHHHHHHCCCcEEE-eCcccchheeeeeEEeccccccccCCcCCCcce-eCCC-EEE
Confidence 34455 566777774 35667888888899999 9999999754321100 0111112332 2332 344
Q ss_pred EEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee-----------------eeecCCEEEEecccCC
Q 046696 372 FLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY-----------------RYRVGDILKVAGFKNK 431 (609)
Q Consensus 372 Fip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly-----------------RYr~GDvv~v~gf~~~ 431 (609)
.++.+ + .+|++|+.|||+|++ +.||| +|+|||++++.
T Consensus 331 i~d~~--g----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~----- 387 (511)
T 3e7w_A 331 IMDEE--G----------------QPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQ----- 387 (511)
T ss_dssp EECTT--S----------------CBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEE-----
T ss_pred EECCC--C----------------CCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEcc-----
Confidence 44432 1 247789999999985 45555 69999999885
Q ss_pred CCEEEEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 432 APQFNFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 432 ~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
.+.+.|+||.+|+|+++|++|++.+||++|.+
T Consensus 388 dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 419 (511)
T 3e7w_A 388 DGQIFCQGRLDFQIKLHGYRMELEEIEFHVRQ 419 (511)
T ss_dssp TTEEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred CCeEEEEccccCEEEECCEEeCHHHHHHHHHh
Confidence 57899999999999999999999999999976
No 11
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=99.63 E-value=1.2e-14 Score=161.64 Aligned_cols=130 Identities=15% Similarity=0.135 Sum_probs=94.2
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeecccccccccccc--ccC----CC-CCCCCCCceeeccCceEEEEEeCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFG--LNL----NP-MCNPSEVSYTLLPTMAYFEFLPVNRKN 379 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~--i~~----~~-~~~~~~~~~~l~~~~~f~EFip~~~~~ 379 (609)
++.+++||. ....+.+++.+|+++++ +.||+||+... .+. .+ ...++..|.. .|+. -+++++++..
T Consensus 299 lr~i~~gGe~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~i~d~~~~- 374 (536)
T 3ni2_A 299 LRMIKSGGAPLGKELEDTVRAKFPQARLG-QGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTV-VRNA-EMKIVDPETG- 374 (536)
T ss_dssp CCEEEEESSCCCHHHHHHHHHHCTTSEEE-EEEECGGGSSEEEECGGGSSSCCCCCTTCCCEE-CSSC-EEEEECTTTC-
T ss_pred ceEEEECCCCCCHHHHHHHHHHCCCCCcc-ccccccccchhhhcccccCCccccCCCCCeeEe-CCCc-EEEEEeCCCC-
Confidence 677778874 35667788888899999 99999997532 111 01 1112223333 2332 3455553321
Q ss_pred CCCCCcccccccccccccCCCCCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCEEEEEeecC
Q 046696 380 GEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQFNFVCRKN 442 (609)
Q Consensus 380 ~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~i~f~gR~~ 442 (609)
..|++|+.|||+|++ ..||| +|||||+++++ ..+.+.|+||.+
T Consensus 375 ----------------~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~----~dG~l~~~GR~d 434 (536)
T 3ni2_A 375 ----------------ASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYID----DDDELFIVDRLK 434 (536)
T ss_dssp ----------------CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEEC----TTSCEEEEEECS
T ss_pred ----------------cCCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEc----CCceEEEEeccc
Confidence 246789999999986 56776 49999999998 478999999999
Q ss_pred eeEeccccccCHHHHHHHHHH
Q 046696 443 VALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 443 ~~l~~~GEkv~e~~v~~av~~ 463 (609)
|+|+++|++|++.+||++|.+
T Consensus 435 d~ik~~G~~v~p~eIE~~l~~ 455 (536)
T 3ni2_A 435 ELIKYKGFQVAPAELEALLIA 455 (536)
T ss_dssp CCEEETTEEECHHHHHHHHHT
T ss_pred ceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999965
No 12
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=99.62 E-value=9.9e-15 Score=161.29 Aligned_cols=128 Identities=13% Similarity=0.162 Sum_probs=90.5
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC-------CCCCCCceeeccCceEEEEEeCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM-------CNPSEVSYTLLPTMAYFEFLPVNRKN 379 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~-------~~~~~~~~~l~~~~~f~EFip~~~~~ 379 (609)
++.+++||. ....+++.+.+++++++ +.||+||+...+...+. ..+...+.. .++ .-+..++.+ +
T Consensus 263 lr~~~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~--g 337 (512)
T 3fce_A 263 MKTFLFCGEVLPNEVARKLIERFPKATIM-NTYGPTEATVAVTGIHVTEEVLDQYKSLPVGYC-KSD-CRLLIMKED--G 337 (512)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHCTTCEEE-EEECCGGGSSCSEEEECCHHHHHHCSSCCCEEE-CTT-CEEEEECSS--S
T ss_pred ccEEEEecCcCCHHHHHHHHHHCCCCEEE-eCcccChhhhheeeEEeccccccccCCCccccc-cCC-cEEEEECCC--C
Confidence 567777774 35667788888899999 99999997543211010 011112232 222 223333322 1
Q ss_pred CCCCCcccccccccccccCCCCCeEEEEEee---cccee-----------------eeecCCEEEEecccCCCCEEEEEe
Q 046696 380 GEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY-----------------RYRVGDILKVAGFKNKAPQFNFVC 439 (609)
Q Consensus 380 ~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly-----------------RYr~GDvv~v~gf~~~~P~i~f~g 439 (609)
..+++|+.|||+|++ +.||| +|+|||++++. .+.+.|+|
T Consensus 338 ----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~~-----dG~l~i~G 396 (512)
T 3fce_A 338 ----------------TIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYVE-----NGLLFYNG 396 (512)
T ss_dssp ----------------CBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEEE-----TTEEEEEE
T ss_pred ----------------CCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEec-----CCEEEEec
Confidence 246789999999985 56776 59999999884 57899999
Q ss_pred ecCeeEeccccccCHHHHHHHHHH
Q 046696 440 RKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 440 R~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
|.+|+|+++|++|++.+||++|.+
T Consensus 397 R~~d~ik~~G~~v~p~eIE~~l~~ 420 (512)
T 3fce_A 397 RLDFQIKLHGYRMELEEIEHHLRA 420 (512)
T ss_dssp EGGGCEEETTEEECHHHHHHHHHH
T ss_pred ccCCEEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999976
No 13
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=99.61 E-value=2.6e-14 Score=157.87 Aligned_cols=129 Identities=13% Similarity=0.194 Sum_probs=92.5
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCC--CCCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNP--MCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~--~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ....+.+++.+ |++++ +.||+||+.+...... ...+...|.. .|+. -++.++++..
T Consensus 270 lr~~~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~G~p-~~~~-~~~i~d~~~g------ 339 (503)
T 4fuq_A 270 MRLFISGSAPLLADTHREWSAKT-GHAVL-ERYGMTETNMNTSNPYDGDRVPGAVGPA-LPGV-SARVTDPETG------ 339 (503)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHH-SCCEE-ECCEETTTEECBCCCSSSCCCTTEEEEB-CTTC-EEEEECTTTC------
T ss_pred cEEEEECCCCCCHHHHHHHHHHh-CCCcc-ceEcccccCcccccCCCCCCcCCccccC-CCCe-EEEEEECCCC------
Confidence 677888885 35566777777 78999 9999999854332111 1111112222 2322 3444543321
Q ss_pred cccccccccccccCCCCCeEEEEEee---ccceee--------------eecCCEEEEecccCCCCEEEEEeecCeeEec
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT---YAGLYR--------------YRVGDILKVAGFKNKAPQFNFVCRKNVALSI 447 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt---~~GlyR--------------Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~ 447 (609)
.++++|+.|||+|+. ..|||. |||||+++++ ..+.+.|+||.+|+|++
T Consensus 340 -----------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~----~dG~l~~~GR~dd~ik~ 404 (503)
T 4fuq_A 340 -----------KELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKID----ERGYVHILGRGKDLVIT 404 (503)
T ss_dssp -----------CBCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEEC----TTCEEEECCSSTTCEEE
T ss_pred -----------CCCcCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEc----CCCcEEEEecCCCEEEE
Confidence 247889999999986 567773 9999999998 47899999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 046696 448 DSDKTDEVELQNAVKN 463 (609)
Q Consensus 448 ~GEkv~e~~v~~av~~ 463 (609)
+|++|++.|||++|.+
T Consensus 405 ~G~~v~p~eIE~~l~~ 420 (503)
T 4fuq_A 405 GGFNVYPKEIESEIDA 420 (503)
T ss_dssp TTEEECHHHHHHHHHT
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999965
No 14
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.60 E-value=1.4e-14 Score=162.56 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=55.5
Q ss_pred cCCCCCeEEEEEee---cccee----------------------eeecCCEEEEecccCCCCEEEEEeecCeeEeccccc
Q 046696 397 DVELGQEYELVVTT---YAGLY----------------------RYRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDK 451 (609)
Q Consensus 397 eve~G~~yelvvTt---~~Gly----------------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEk 451 (609)
++++|+.|||+|++ +.||| +|||||+++++ ...+.|+||.+|+|+++|++
T Consensus 393 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-----dG~l~~~GR~dd~Ik~~G~~ 467 (590)
T 3kxw_A 393 PCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-----ENELYVTGRIKDLIIIYGKN 467 (590)
T ss_dssp BCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-----TTEEEEEEESSCHHHHHHHT
T ss_pred CCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-----CCEEEEEcCccceEEECCEe
Confidence 57889999999986 56665 79999999887 35799999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 046696 452 TDEVELQNAVKNA 464 (609)
Q Consensus 452 v~e~~v~~av~~a 464 (609)
|++.+||.+|...
T Consensus 468 v~p~eIE~~l~~~ 480 (590)
T 3kxw_A 468 HYPQDIEFSLMHS 480 (590)
T ss_dssp THHHHHHHHHHHS
T ss_pred cCHHHHHHHHHhc
Confidence 9999999999553
No 15
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=99.59 E-value=3e-14 Score=158.98 Aligned_cols=153 Identities=14% Similarity=0.246 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhh----cC--CCCeeccccccccccccccC
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYY----SN--GLPLVCTMYASSECYFGLNL 350 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~----~~--g~~~~~~~YgaSEg~~~i~~ 350 (609)
.|.....|.+...... ...-++. ++.+++||. ....+++.+. ++ +++++ +.||+||+...+..
T Consensus 275 ~P~~~~~l~~~~~~~~----~~~~~~~---lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~ 346 (549)
T 3g7s_A 275 VPPALNVLVNTLESSN----KTYDWSY---LKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHN-QIWGMTEACPMVTT 346 (549)
T ss_dssp CHHHHHHHHHHHHHSC----CCCCCTT---CCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEE-EEEECGGGSSEEEE
T ss_pred CCHHHHHHHhhhhhhc----ccCCccc---eeEEEeCCccCCHHHHHHHHHHHHhhcCCcccccc-ceEeccccchhhhc
Confidence 5666666655443321 0122344 677778874 3445566555 53 27888 99999997543222
Q ss_pred CCC---CCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee---------
Q 046696 351 NPM---CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------- 415 (609)
Q Consensus 351 ~~~---~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------- 415 (609)
.+. ..+...|.+ .|+. -++++++++. .+|++|+.|||+|++ +.|||
T Consensus 347 ~~~~~~~~~~~~G~p-~~~~-~~~i~d~~~g-----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~ 407 (549)
T 3g7s_A 347 NPPLRLDKSTTQGVP-MSDI-ELKVISLEDG-----------------RELGVGESGEIVIRGPNIFKGYWKREKENQEC 407 (549)
T ss_dssp CCGGGGGGTTSCCEE-CTTC-EEEEECSSSC-----------------CEECTTCCEEEEEESTTSCSEETTCTTGGGTS
T ss_pred CCccccCcCCCcccc-CCCC-EEEEEeCCCC-----------------cCCCCCCceEEEEECcchhhhhCCChhhhhhh
Confidence 111 111223333 2332 3455553321 246789999999986 55665
Q ss_pred ---------eeecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 416 ---------RYRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 416 ---------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+|||||+++++ ..+.+.|+||.+|+|+++|++|++.|||++|.+
T Consensus 408 f~~~~~g~~~~~TGDl~~~~----~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (549)
T 3g7s_A 408 WWYDEKGRKFFRTGDVGFID----EEGFLHFQDRVKEVIKYKGYTIAPFELEALLMK 460 (549)
T ss_dssp EEECTTCCEEEEEEEEEEEC----TTSCEEEEEEC------------CHHHHHHHTT
T ss_pred hhccCCCCceEccCcEEEEc----CCceEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 79999999998 478999999999999999999999999999965
No 16
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=99.59 E-value=4.8e-14 Score=155.60 Aligned_cols=153 Identities=12% Similarity=0.109 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCCCC
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMCNP 356 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~~~ 356 (609)
.|..+..|.+...+. . -..-+++ ++.+++||. ....+++++.+ +++++ +.||+||+.+.+.. +...+
T Consensus 251 ~P~~~~~l~~~~~~~-~---~~~~l~~---lr~~~~gG~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~-~~~~~ 320 (504)
T 1t5h_X 251 TPTHLDALAAAAAHA-G---SSLKLDS---LRHVTFAGATMPDAVLETVHQHL-PGEKV-NIYGTTEAMNSLYM-RQPKT 320 (504)
T ss_dssp CHHHHHHHHHHHCCT-T---CCCCCTT---CCEEEECCTTCCHHHHHHHHHHC-CSEEE-EEEEETTTEEEEEE-ESCSS
T ss_pred ChHHHHHHHhhhccc-c---ccccCcc---ccEEEEcCCcCCHHHHHHHHHhc-Cccee-eeeccccccccccc-cCCCC
Confidence 566677766554221 0 0111244 677888874 35667788888 68888 99999998433321 11111
Q ss_pred CCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEe-e---ccceee-------------eec
Q 046696 357 SEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVT-T---YAGLYR-------------YRV 419 (609)
Q Consensus 357 ~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvT-t---~~GlyR-------------Yr~ 419 (609)
...+.. .++. -+..++.+.. . ...+++|+.|||+|+ . +.|||+ |||
T Consensus 321 ~~~g~p-~~~~-~~~i~~~~~~----------~-----~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~T 383 (504)
T 1t5h_X 321 GTEMAP-GFFS-EVRIVRIGGG----------V-----DEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRT 383 (504)
T ss_dssp SSEEBC-CTTC-CEEEECTTSC----------T-----TCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEE
T ss_pred CccccC-CCCC-ceeEEeccCC----------C-----CCcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCcccc
Confidence 122221 1221 2333332211 0 024778999999998 4 468884 999
Q ss_pred CCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 420 GDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 420 GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
||+++++ ..+.+.|+||.+|+|+++|++|++.+||++|.+
T Consensus 384 GDlg~~~----~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 423 (504)
T 1t5h_X 384 SDVAVWT----PEGTVRILGRVDDMIISGGENIHPSEIERVLGT 423 (504)
T ss_dssp EEEEEEC----TTSCEEEEEEGGGCEEETTEEECHHHHHHHHTT
T ss_pred CcEEEEC----CCceEEEeCcccCEEEECCEEECHHHHHHHHHh
Confidence 9999998 367899999999999999999999999999964
No 17
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=99.59 E-value=4.3e-14 Score=157.50 Aligned_cols=128 Identities=16% Similarity=0.205 Sum_probs=91.2
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCCC----CCCCceeeccCceEEEEEeCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMCN----PSEVSYTLLPTMAYFEFLPVNRKNGEP 382 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~~----~~~~~~~l~~~~~f~EFip~~~~~~~~ 382 (609)
++.+++||. ....+++++.+ |++++ +.||+||+.+.+.. ...+ +...|.++ ++..-+.+++.+ +
T Consensus 300 lr~~~~gG~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~-~~~~~~~~~~~~G~p~-~~~~~~~i~d~~--~--- 370 (539)
T 1mdb_A 300 LQVLQVGGAKFSAEAARRVKAVF-GCTLQ-QVFGMAEGLVNYTR-LDDPEEIIVNTQGKPM-SPYDESRVWDDH--D--- 370 (539)
T ss_dssp CCEEEEESSCCCHHHHTTHHHHT-CSEEE-EEEECTTSCEEECC-TTSCHHHHHHCCCEES-STTCEEEEECTT--S---
T ss_pred eeEEEEcCCCCCHHHHHHHHHHh-CCcEE-EEEcCCCCcccccC-CCCcHHhcCCCCCccc-CCCceEEEECCC--C---
Confidence 677777774 35566777778 78988 99999998654432 1111 01223332 222223344322 1
Q ss_pred CCcccccccccccccCCCCCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCEEEEEeecCeeE
Q 046696 383 KSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQFNFVCRKNVAL 445 (609)
Q Consensus 383 ~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l 445 (609)
.+|++|+.|||+|+. ..||| +|||||+++++ ..+.+.|+||.+|+|
T Consensus 371 -------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~----~dG~l~~~GR~dd~i 433 (539)
T 1mdb_A 371 -------------RDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLT----RDGYIVVEGRAKDQI 433 (539)
T ss_dssp -------------CBCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEEC----TTSCEEEEEEGGGCE
T ss_pred -------------CCCcCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEEC----CCCcEEEeccccceE
Confidence 247789999999986 56776 49999999998 467899999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 046696 446 SIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 446 ~~~GEkv~e~~v~~av~~ 463 (609)
+++|++|++.+||++|.+
T Consensus 434 k~~G~~v~p~eIE~~l~~ 451 (539)
T 1mdb_A 434 NRGGEKVAAEEVENHLLA 451 (539)
T ss_dssp ECSSCEECHHHHHHHHTT
T ss_pred EECCEEECHHHHHHHHHh
Confidence 999999999999999964
No 18
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=99.58 E-value=9.2e-15 Score=163.18 Aligned_cols=151 Identities=17% Similarity=0.193 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCC-eeccccccccccccccCCCCC-
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLP-LVCTMYASSECYFGLNLNPMC- 354 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~-~~~~~YgaSEg~~~i~~~~~~- 354 (609)
.|.....|.+..... ..-+++ ++.+++||. ....+++++.+ +++ ++ +.||+||+...+...+..
T Consensus 288 ~P~~~~~l~~~~~~~------~~~l~~---lr~i~~gG~~l~~~~~~~~~~~~-~~~~v~-~~YG~TE~~~~~~~~~~~~ 356 (550)
T 3rix_A 288 VPTLFSFFAKSTLID------KYDLSN---LHEIASGGAPLSKEVGEAVAKRF-HLPGIR-QGYGLTETTSAILITPEGD 356 (550)
T ss_dssp CHHHHHHHHHCCGGG------GSCCTT---CCEEEECSSCCCHHHHHHHHHHT-TCSCCE-EEEECGGGSSEEEECCTTC
T ss_pred CcHHHHHHHhCcccc------ccCccc---ccEEEEecCCCCHHHHHHHHHHc-CCCccc-cccCcCccccceecCCCCC
Confidence 566666655432211 112344 677788884 35667788888 554 77 999999985433322221
Q ss_pred -CCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee--------------e
Q 046696 355 -NPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------R 416 (609)
Q Consensus 355 -~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------R 416 (609)
.+...|.. .|+ .-++++++++. ..+.+|+.|||+|++ +.||| +
T Consensus 357 ~~~~~vG~~-~~~-~~~~i~d~~~~-----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~ 417 (550)
T 3rix_A 357 DKPGAVGKV-VPF-FEAKVVDLDTG-----------------KTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGW 417 (550)
T ss_dssp CCTTEEEEE-CTT-CEEEEECTTTC-----------------CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSC
T ss_pred CCCCCcccc-cCC-cEEEEEeCCCC-----------------cCCCCCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCC
Confidence 11222222 232 23455554322 246789999999986 56776 4
Q ss_pred eecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHH
Q 046696 417 YRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 417 Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a 464 (609)
|+|||+++++ ..+.+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 418 ~~TGDl~~~~----~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~ 461 (550)
T 3rix_A 418 LHSGDIAYWD----EDEHFFIVDRLKSLIKYKGYQVAPAELESILLQH 461 (550)
T ss_dssp EEEEEEEEEC----TTCCEEEC--------------------------
T ss_pred eecCcEEEEe----CCceEEEEecchheeEECCEEECHHHHHHHHHhC
Confidence 9999999998 4789999999999999999999999999999763
No 19
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=99.58 E-value=3.2e-14 Score=157.50 Aligned_cols=129 Identities=12% Similarity=0.179 Sum_probs=86.5
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC-------CCCCCCceeeccCceEEEEEeCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM-------CNPSEVSYTLLPTMAYFEFLPVNRKN 379 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~-------~~~~~~~~~l~~~~~f~EFip~~~~~ 379 (609)
++.+++||. ....+++.+.+++++++ +.||+||+...+..... ......|.. .|+. -..+++.+ +
T Consensus 266 lr~~~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p-~~~~-~~~i~d~~--g 340 (521)
T 3l8c_A 266 LTHFYFDGEELTVSTARKLFERFPSAKII-NAYGPTEATVALSAIEITREMVDNYTRLPIGYP-KPDS-PTYIIDED--G 340 (521)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHCTTCEEE-EEECCGGGSSCSEEEEECHHHHHHCSSCEEEEE-CTTS-CEEEECTT--S
T ss_pred ceEEEEecccCCHHHHHHHHHHCCCceEE-eCcCccHHhhhhceeecccccccCCCccccccc-cCCC-EEEEECCC--c
Confidence 567777774 35567777788899999 99999997543221000 001112222 2222 23344422 1
Q ss_pred CCCCCcccccccccccccCCCCCeEEEEEee---cccee-----------------eeecCCEEEEecccCCCCEEEEEe
Q 046696 380 GEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY-----------------RYRVGDILKVAGFKNKAPQFNFVC 439 (609)
Q Consensus 380 ~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly-----------------RYr~GDvv~v~gf~~~~P~i~f~g 439 (609)
.++++|+.|||+|++ +.||| +|+|||+++++ ..+.+.|+|
T Consensus 341 ----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d----~dG~l~~~G 400 (521)
T 3l8c_A 341 ----------------KELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLT----EDNILLYGG 400 (521)
T ss_dssp ----------------CBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEEC----SSSCEEEEE
T ss_pred ----------------CCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEe----CCCeEEEeC
Confidence 257889999999986 56776 49999999998 467899999
Q ss_pred ecCeeEeccccccCHHHHHHHHHH
Q 046696 440 RKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 440 R~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
|.+|+|+++|++|++.+||++|.+
T Consensus 401 R~~d~i~~~G~~v~p~eIE~~l~~ 424 (521)
T 3l8c_A 401 RLDFQIKYAGYRIELEDVSQQLNQ 424 (521)
T ss_dssp EGGGBCC-----CBHHHHHHHHHT
T ss_pred cccceEeECCEEeCHHHHHHHHHc
Confidence 999999999999999999999975
No 20
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=99.58 E-value=2.3e-13 Score=155.32 Aligned_cols=228 Identities=13% Similarity=0.122 Sum_probs=126.4
Q ss_pred eeeEEEecCc---cchHHHHhhhcC--CCCeeccccccccccccccCC-CC---CCCCCCceeeccCceEEEEEeCCCCC
Q 046696 309 YIDVIVTGTM---SQYIPTLDYYSN--GLPLVCTMYASSECYFGLNLN-PM---CNPSEVSYTLLPTMAYFEFLPVNRKN 379 (609)
Q Consensus 309 ~l~~~~~G~~---~~y~~~l~~~~~--g~~~~~~~YgaSEg~~~i~~~-~~---~~~~~~~~~l~~~~~f~EFip~~~~~ 379 (609)
.++.+++||. ....+.+.+.+| +++++ +.||+||+...+... +. ..++..+.+ .|+.. +..++.+ +
T Consensus 379 sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p-~~g~~-v~i~d~~--g 453 (652)
T 1pg4_A 379 SLRILGSVGEPINPEAWEWYWKKIGKEKCPVV-DTWWQTETGGFMITPLPGAIELKAGSATRP-FFGVQ-PALVDNE--G 453 (652)
T ss_dssp TCCEEEEESSCCCHHHHHHHHHHTTTTCSCEE-EEBCCGGGSSCSBCCCTTTCCBCTTCCBSB-CTTCC-EEEECTT--C
T ss_pred ceEEEEEecCCCCHHHHHHHHHHhCCCCCcEE-ccccCcccccceecCCCCCcCccCCccccC-cCCCe-EEEECCC--C
Confidence 3678888874 345566777773 28899 999999974322211 11 111223332 23221 3333322 1
Q ss_pred CCCCCcccccccccccccCCCCCeEEEEEee-----cccee----------------eeecCCEEEEecccCCCCEEEEE
Q 046696 380 GEPKSLKEDQQQVLDLTDVELGQEYELVVTT-----YAGLY----------------RYRVGDILKVAGFKNKAPQFNFV 438 (609)
Q Consensus 380 ~~~~~~~~~~~~~l~~~eve~G~~yelvvTt-----~~Gly----------------RYr~GDvv~v~gf~~~~P~i~f~ 438 (609)
.+|+.|+.|||+|+. ..||| +|+|||+++++ ..+.+.|+
T Consensus 454 ----------------~~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d----~dG~l~i~ 513 (652)
T 1pg4_A 454 ----------------HPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRD----EDGYYWIT 513 (652)
T ss_dssp ----------------CBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEEC----TTSCEEEE
T ss_pred ----------------CCcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEc----CCCcEEEE
Confidence 246789999999986 24454 39999999998 46899999
Q ss_pred eecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCc-eEEEEEEEeeCCCCCCChhhHHHHHHHH
Q 046696 439 CRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPG-RYVLFWEISQSGATQIPPSVFEDCCLSI 517 (609)
Q Consensus 439 gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~-~Y~l~~E~~~~~~~~~~~~~l~~~~~~l 517 (609)
||.+|+|+++|++|.+.|||++|.+. .+ |.+.+|+.-.....+ .-+.|+.++. ....+.+..+++.+.+
T Consensus 514 GR~dd~Ik~~G~rI~~~eIE~~l~~~------p~--V~ea~Vvg~~~~~~g~~l~a~Vv~~~--~~~~~~~~~~~l~~~l 583 (652)
T 1pg4_A 514 GRVDDVLNVSGHRLGTAEIESALVAH------PK--IAEAAVVGIPHAIKGQAIYAYVTLNH--GEEPSPELYAEVRNWV 583 (652)
T ss_dssp EESSSEEEETTEEEEHHHHHHHHHHS------TT--EEEEEEEEEEETTTEEEEEEEEEECT--TCCCCHHHHHHHHHHH
T ss_pred ecCCCEEEECCEEECHHHHHHHHHhC------CC--cceEEEEEEEcCCCCeEEEEEEEECC--CCCCCHHHHHHHHHHH
Confidence 99999999999999999999999752 22 445555431111112 3346666642 1222323344455555
Q ss_pred HHHhChHhHhhccCCCccCCeEEEEcC------CccH--HHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhccc
Q 046696 518 EESLNSVYRQGRVSDKSIGPLEIKLVE------SGTF--DKLMDYALSQGASINQYKTPRCVKYAPIIELLNSKV 584 (609)
Q Consensus 518 d~~Ln~~Y~~~R~~~g~l~p~~v~iv~------~gtF--~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~ 584 (609)
.+.|.. |. .|-.|.+|. .|-. ..+++.. .+. ..+++.+--+.|++.++.+.+.+
T Consensus 584 ~~~l~~-~~---------~P~~i~~v~~lP~T~sGKi~R~~L~~~~--~~~-~~~~~~~~~l~~p~~~~~~~~~~ 645 (652)
T 1pg4_A 584 RKEIGP-LA---------TPDVLHWTDSLPKTRSGKIMRRILRKIA--AGD-TSNLGDTSTLADPGVVEKLLEEK 645 (652)
T ss_dssp HHHTCG-GG---------CCSEEEECSCCCBCTTSCBCHHHHHHHH--HTC-----------CCTTHHHHHHHHH
T ss_pred HHhCCC-Cc---------CCeEEEEcCCCCCCCCccchHHHHHHHH--hCC-CCCCCCccccCCHHHHHHHHHHh
Confidence 555432 22 233344432 2322 2233322 221 13566677788888888887644
No 21
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.56 E-value=7.2e-15 Score=162.29 Aligned_cols=130 Identities=12% Similarity=0.129 Sum_probs=74.5
Q ss_pred eeEEEecCccchHHHHhhhcCCCCeeccccccccccccccC-CCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcccc
Q 046696 310 IDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNL-NPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKED 388 (609)
Q Consensus 310 l~~~~~G~~~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~-~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~ 388 (609)
++.+.+||.....+++++.+++++++ +.||+||+...... .....+...|.+ .|+. -+++++.+.
T Consensus 274 lr~~~~~g~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~G~p-~~~~-~~~i~d~~~----------- 339 (509)
T 3ivr_A 274 LRAVTGLDTPETIERFEATCPNATFW-ATFGQSETSGLSTFAPYRDRPKSAGRP-LFWR-TVAVVDAED----------- 339 (509)
T ss_dssp CCEEEEECCHHHHHHHHHHCTTCEEE-EEEEEGGGTEEEEEEEGGGSTTSCCEE-CTTC-EEEEECTTS-----------
T ss_pred hheecccCChHHHHHHHHhcCCCeEE-cccCccccccccccCccccCCCccccc-CCCc-EEEEECCCC-----------
Confidence 56777777767778888888899999 99999997532211 111111223443 2322 344444331
Q ss_pred cccccccccCCCCCeEEEEEee---ccceee-------------eecCCEEEEecccCCCCEEEEEeec--CeeEecccc
Q 046696 389 QQQVLDLTDVELGQEYELVVTT---YAGLYR-------------YRVGDILKVAGFKNKAPQFNFVCRK--NVALSIDSD 450 (609)
Q Consensus 389 ~~~~l~~~eve~G~~yelvvTt---~~GlyR-------------Yr~GDvv~v~gf~~~~P~i~f~gR~--~~~l~~~GE 450 (609)
.+|++|+.|||+|++ ..|||+ |||||+++++ ..+.+.|+||. +|+|+++|+
T Consensus 340 -------~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~----~dG~l~~~GR~d~~d~ik~~G~ 408 (509)
T 3ivr_A 340 -------RPLPPGEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFD----ADGYLFYAGRAPEKELIKTGGE 408 (509)
T ss_dssp -------CBCCTTCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEEC----TTSCEEEEEEC-----------
T ss_pred -------CCCCCCCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEEC----CCceEEEeCCCCcceeEEECCE
Confidence 247889999999986 678885 9999999998 47889999999 999999999
Q ss_pred ccCHHHHHHHHHHH
Q 046696 451 KTDEVELQNAVKNA 464 (609)
Q Consensus 451 kv~e~~v~~av~~a 464 (609)
+|++.+||++|.+.
T Consensus 409 ~v~p~eiE~~l~~~ 422 (509)
T 3ivr_A 409 NVYPAEVEGALKQH 422 (509)
T ss_dssp --------------
T ss_pred EECHHHHHHHHHhC
Confidence 99999999999763
No 22
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=99.56 E-value=1.1e-14 Score=162.37 Aligned_cols=151 Identities=10% Similarity=0.104 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCCC-
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMCN- 355 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~~- 355 (609)
.|..+..|.+..... ..-.++ ++.+++||. ....+++++.+ |++++ +.||+||+.+.+.......
T Consensus 288 ~P~~~~~l~~~~~~~------~~~~~~---lr~i~~gG~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~ 356 (544)
T 3o83_A 288 VPSAVIMWLEKAAQY------KDQIQS---LKLLQVGGASFPESLARQVPEVL-NCKLQ-QVFGMAEGLVNYTRLDDSDE 356 (544)
T ss_dssp CHHHHHHHHHHHTTT------HHHHTT---CCEEEEESSCCCHHHHTHHHHHH-CSEEE-EEEECTTSCEEECCTTSCHH
T ss_pred chHHHHHHHhchhhc------cccCCc---ceEEEEcCCCCCHHHHHHHHHHh-CCcEE-eeeccccccceeecCCCchh
Confidence 566666655544321 112234 567777774 35667777888 89999 9999999865432111100
Q ss_pred --CCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee--------------e
Q 046696 356 --PSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------R 416 (609)
Q Consensus 356 --~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------R 416 (609)
....|.++.++. -++.++.+ + .+|++|+.|||+|++ +.||| +
T Consensus 357 ~~~~~~G~p~~~~~-~~~i~d~~--~----------------~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~ 417 (544)
T 3o83_A 357 QIFTTQGRPISSDD-EIKIVDEQ--Y----------------REVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNY 417 (544)
T ss_dssp HHHHCCCEESCTTC-EEEEECTT--S----------------CBCCTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCC
T ss_pred hccCCCceecCCCc-EEEEECCC--C----------------CCCCCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCC
Confidence 012233332322 34444422 1 247889999999986 56776 4
Q ss_pred eecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHH
Q 046696 417 YRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 417 Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a 464 (609)
|||||+++++ ..+.+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 418 ~~TGDlg~~~----~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~ 461 (544)
T 3o83_A 418 YYSGDLVQRT----PDGNLRVVGRIKDQINRGGEKIASEEIEKLILLH 461 (544)
T ss_dssp EEEEEEEEEC----TTSCEEEEEEEC----------------------
T ss_pred eEcCCEEEEc----CCCCEEEEeecCCEEEeCCEEECHHHHHHHHHhC
Confidence 9999999998 4689999999999999999999999999999764
No 23
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=99.56 E-value=1.3e-13 Score=154.96 Aligned_cols=128 Identities=14% Similarity=0.189 Sum_probs=91.3
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM--CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ...++++++.+ |++++ +.||+||+.+.+...+. ..++..|.. .|+. -+++++.+ +
T Consensus 324 lr~i~~gGe~l~~~~~~~~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~~~~-~v~i~d~~--g----- 392 (570)
T 3c5e_A 324 LQNCVTVGESLLPETLENWRAQT-GLDIR-ESYGQTETGLTCMVSKTMKIKPGYMGTA-ASCY-DVQIIDDK--G----- 392 (570)
T ss_dssp CCEEEEESSCCCHHHHHHHHHHH-SCCCE-EEEEETTTEEEEECCTTSCCCTTCCCEE-CTTC-CEEEECTT--S-----
T ss_pred ceEEEEcCCcCCHHHHHHHHHHh-CCchh-hccchhhcccceecCcccccCCCccccc-CCCc-eEEEECCC--C-----
Confidence 566677764 35567777778 89998 99999997543322221 122233333 2322 24444432 1
Q ss_pred cccccccccccccCCCCCeEEEEEe-----e---cccee-------------eeecCCEEEEecccCCCCEEEEEeecCe
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVT-----T---YAGLY-------------RYRVGDILKVAGFKNKAPQFNFVCRKNV 443 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvT-----t---~~Gly-------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~ 443 (609)
..|++|+.|||+|+ . +.||| +|+|||+++++ ..+.+.|+||.+|
T Consensus 393 -----------~~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~~d----~dG~l~~~GR~dd 457 (570)
T 3c5e_A 393 -----------NVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGIKD----EDGYFQFMGRADD 457 (570)
T ss_dssp -----------CBCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEEEC----TTSCEEEEEEGGG
T ss_pred -----------CCCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEEEc----CCceEEEEecCCC
Confidence 24778999999997 3 45776 49999999998 4678999999999
Q ss_pred eEeccccccCHHHHHHHHHH
Q 046696 444 ALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 444 ~l~~~GEkv~e~~v~~av~~ 463 (609)
+|+++|++|++.+||++|.+
T Consensus 458 ~Ik~~G~~V~p~eIE~~l~~ 477 (570)
T 3c5e_A 458 IINSSGYRIGPSEVENALME 477 (570)
T ss_dssp CEEETTEEECHHHHHHHHHT
T ss_pred EEEECCEEECHHHHHHHHHh
Confidence 99999999999999999975
No 24
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=99.55 E-value=4.2e-14 Score=158.06 Aligned_cols=130 Identities=18% Similarity=0.290 Sum_probs=69.5
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccC---CCCCCCCCCceeeccCceEEEEEeCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNL---NPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPK 383 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~---~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~ 383 (609)
++.+++||. ....+++++.+ +++++ +.||+||+.+.... .+.......+.. .++ .-...++.+..
T Consensus 296 lr~~~~gG~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~p-~~~-~~~~i~d~~~~----- 366 (562)
T 3ite_A 296 LVYLGVGGEKMTPRTQQIWSSSD-RVALV-NVYGPTEVTIGCSAGRILPDSDTRCIGHP-LGD-SVAHVLAPGSN----- 366 (562)
T ss_dssp CCEEEEESSCCCHHHHHHHTTCS-SCEEE-EEECCGGGCSCSEEEECCTTSCTTEEEEE-CTT-CEEEEECTTSS-----
T ss_pred eEEEEEecCCCCHHHHHHHhhCC-CcEEE-EeeccchheeeeeeeeecCCCCCcccccc-CCC-CeEEEEeCCCC-----
Confidence 667777774 34456666655 88999 99999997543221 111111112222 222 23444443321
Q ss_pred CcccccccccccccCCCCCeEEEEEee---cccee---------------eeecCCEEEEecccCCCCEEEEEeecCeeE
Q 046696 384 SLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY---------------RYRVGDILKVAGFKNKAPQFNFVCRKNVAL 445 (609)
Q Consensus 384 ~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly---------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l 445 (609)
.+|++|+.|||+|+. +.||| +|+|||+++++ ..+.+.|+||.+|+|
T Consensus 367 ------------~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d----~dG~l~~~GR~dd~I 430 (562)
T 3ite_A 367 ------------EHVKKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMD----ADSSILFLGRKDEQV 430 (562)
T ss_dssp ------------CBCCTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEEC----TTSCEEEEEEC----
T ss_pred ------------CCCCCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEc----CCCeEEEEccccCEE
Confidence 247889999999976 56776 69999999998 478999999999999
Q ss_pred eccccccCHHHHHHHHHHH
Q 046696 446 SIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 446 ~~~GEkv~e~~v~~av~~a 464 (609)
+++|++|++.|||++|.+.
T Consensus 431 k~~G~~v~p~eIE~~l~~~ 449 (562)
T 3ite_A 431 KVRGQRLELGEVSEVIRSL 449 (562)
T ss_dssp -------------------
T ss_pred eECcEEECHHHHHHHHHhc
Confidence 9999999999999999764
No 25
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=99.55 E-value=1.5e-13 Score=152.33 Aligned_cols=126 Identities=16% Similarity=0.194 Sum_probs=86.1
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccC-CC---CCCCCCCceeeccCceEEEEEeCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNL-NP---MCNPSEVSYTLLPTMAYFEFLPVNRKNGEP 382 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~-~~---~~~~~~~~~~l~~~~~f~EFip~~~~~~~~ 382 (609)
++.+++||. ....+.++.. +++++ +.||+||+...... .+ ...+...+.. .+ ..++...++.+
T Consensus 286 lr~i~~gGe~l~~~~~~~~~~~--~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~~---~~~~~i~d~~~--- 355 (517)
T 3r44_A 286 FRYFITGGAPMPEALIKIYAAK--NIEVV-QGYALTESCGGGTLLLSEDALRKAGSAGRA-TM---FTDVAVRGDDG--- 355 (517)
T ss_dssp CCEEEECSSCCCHHHHHHHHHT--TCEEE-EEEECGGGTTCEEEECGGGTTTTTTCCBEE-CT---TEEEEEECTTS---
T ss_pred ccEEEECCCCCCHHHHHHHHhc--CCcEE-EeecccccccceeecCCccccccCCCCCcC-CC---CeEEEEECCCC---
Confidence 678888885 2444555443 78898 99999997442211 11 1122223332 22 22333323221
Q ss_pred CCcccccccccccccCCCCCeEEEEEee---ccceee-------------eecCCEEEEecccCCCCEEEEEeecCeeEe
Q 046696 383 KSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLYR-------------YRVGDILKVAGFKNKAPQFNFVCRKNVALS 446 (609)
Q Consensus 383 ~~~~~~~~~~l~~~eve~G~~yelvvTt---~~GlyR-------------Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~ 446 (609)
..++.| .|||+|++ ..|||. |||||+++++ ..+.+.|+||.+|+|+
T Consensus 356 -------------~~~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~----~dG~l~~~GR~dd~ik 417 (517)
T 3r44_A 356 -------------VIREHG-EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEID----DEGYLYIKDRLKDMII 417 (517)
T ss_dssp -------------CEESSE-EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEEC----TTSCEEEEECGGGCEE
T ss_pred -------------CCCCCC-CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEc----CCeeEEEecCCcCEEE
Confidence 124567 89999987 678873 9999999998 4689999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 046696 447 IDSDKTDEVELQNAVKN 463 (609)
Q Consensus 447 ~~GEkv~e~~v~~av~~ 463 (609)
++|++|++.+||++|.+
T Consensus 418 ~~G~~v~p~eIE~~l~~ 434 (517)
T 3r44_A 418 SGGENVYPAEIESVIIG 434 (517)
T ss_dssp ETTEEECHHHHHHHHTT
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999999964
No 26
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=99.55 E-value=1.9e-13 Score=151.59 Aligned_cols=128 Identities=13% Similarity=0.098 Sum_probs=89.3
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccc-cccccCCC-CCCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSEC-YFGLNLNP-MCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg-~~~i~~~~-~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ...++++++.+ |++++ +.||+||+ .+.+...+ .+.+...|.. .|+ .-++.++.+ +
T Consensus 302 lr~~~~gGe~l~~~~~~~~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~G~p-~~~-~~~~i~d~~--g----- 370 (529)
T 2v7b_A 302 IRICTSAGEALPREIGERFTAHF-GCEIL-DGIGSTEMLHIFLSNRAGAVEYGTTGRP-VPG-YEIELRDEA--G----- 370 (529)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHH-SCCEE-EEEECTTTSSEEEECCTTCCCTTSCCEE-CTT-CEEEEECTT--S-----
T ss_pred eEEEEEcCCCCCHHHHHHHHHHh-CCcee-eeEchhhcCceeeccccCCCccCCcccC-CCC-CEEEEECCC--C-----
Confidence 677778874 35667788888 89999 99999997 33322111 1222233333 233 245555532 1
Q ss_pred cccccccccccccCCCCCeEEEEEee---cccee-------------eeecCCEEEEecccCCCCEEEEEeecCeeEecc
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT---YAGLY-------------RYRVGDILKVAGFKNKAPQFNFVCRKNVALSID 448 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly-------------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~ 448 (609)
.+|++|+.|||+|++ ..||| +|+|||+++++ ..+.+.|+||.+|+|+++
T Consensus 371 -----------~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~----~~G~l~~~GR~dd~ik~~ 435 (529)
T 2v7b_A 371 -----------HAVPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRL----PNGCYVYAGRSDDMLKVS 435 (529)
T ss_dssp -----------CBCCTTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEEC----TTSCEEEEEEGGGCBC--
T ss_pred -----------CCCCCCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEEC----CCccEEEeCccCCeEEEC
Confidence 247789999999986 56777 39999999998 477999999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 046696 449 SDKTDEVELQNAVKN 463 (609)
Q Consensus 449 GEkv~e~~v~~av~~ 463 (609)
|++|++.+||++|.+
T Consensus 436 G~~v~p~eIE~~l~~ 450 (529)
T 2v7b_A 436 GQYVSPVEVEMVLVQ 450 (529)
T ss_dssp --CBCHHHHHHHHTT
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 27
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=99.55 E-value=3.1e-13 Score=149.42 Aligned_cols=131 Identities=15% Similarity=0.208 Sum_probs=88.4
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC--CCCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM--CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||. ....+++++.+ |++++ +.||+||+.+.+...+. ..+...|.. .|+. -+++++.+.
T Consensus 274 lr~i~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~~~~-~~~i~d~~g------- 342 (505)
T 3nyq_A 274 ARLLVSGSAALPVHDHERIAAAT-GRRVI-ERYGMTETLMNTSVRADGEPRAGTVGVP-LPGV-ELRLVEEDG------- 342 (505)
T ss_dssp CSEEEECSSCCCHHHHHHHHHHH-SCCCE-EEEEETTTEEEEECCTTSCCCTTCCCEE-CTTC-EEEEC-----------
T ss_pred ceEEEECCCCCCHHHHHHHHHhc-CCeee-cccchhhcccccccCCCCCCCCCCcccC-CCCC-EEEEECCCC-------
Confidence 567778874 34556777777 89999 99999998554332221 111223332 2322 244444221
Q ss_pred cccccccccccccCCCCCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCEEEEEeec-CeeEe
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQFNFVCRK-NVALS 446 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~i~f~gR~-~~~l~ 446 (609)
+.+. .+..|+.|||+|++ ..||| +|||||+++++ ..+.+.|+||. +++++
T Consensus 343 ------~~~~--~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~----~dG~l~~~GR~~d~~ik 410 (505)
T 3nyq_A 343 ------TPIA--ALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRD----PDGYVRIVGRKATDLIK 410 (505)
T ss_dssp -------CCC--CCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEEC----TTSCEEEEEESSCCCEE
T ss_pred ------CCcc--cCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEEC----CCccEEEeCCccCceEE
Confidence 1121 23348999999976 56777 39999999998 46899999998 58999
Q ss_pred ccccccCHHHHHHHHHH
Q 046696 447 IDSDKTDEVELQNAVKN 463 (609)
Q Consensus 447 ~~GEkv~e~~v~~av~~ 463 (609)
++|++|++.+||++|.+
T Consensus 411 ~~G~~v~~~eIE~~l~~ 427 (505)
T 3nyq_A 411 SGGYKIGAGEIENALLE 427 (505)
T ss_dssp ETTEEECHHHHHHHHTT
T ss_pred eCCEEECHHHHHHHHHH
Confidence 99999999999999965
No 28
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.53 E-value=2.1e-13 Score=155.97 Aligned_cols=229 Identities=14% Similarity=0.125 Sum_probs=123.0
Q ss_pred ceeeEEEecCc---cchHHHHhhhcC--CCCeeccccccccccccccCC-C----CCCCCCCceeeccCceEEEEEeCCC
Q 046696 308 KYIDVIVTGTM---SQYIPTLDYYSN--GLPLVCTMYASSECYFGLNLN-P----MCNPSEVSYTLLPTMAYFEFLPVNR 377 (609)
Q Consensus 308 ~~l~~~~~G~~---~~y~~~l~~~~~--g~~~~~~~YgaSEg~~~i~~~-~----~~~~~~~~~~l~~~~~f~EFip~~~ 377 (609)
..|+++++||. ....+.+.+.+| +++++ +.||+||+...+... + ...++..+.+ .|+. -++.++.++
T Consensus 384 ~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p-~~g~-~v~i~d~~~ 460 (663)
T 1ry2_A 384 KSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIV-DTYWQTESGSHLVTPLAGGVTPMKPGSASFP-FFGI-DAVVLDPNT 460 (663)
T ss_dssp TTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEE-ECBCCTTTCSCSEECCTTTCCCCCTTCCCEE-CTTC-CEEEECSSS
T ss_pred CceEEEEEEcCCCCHHHHHHHHHHhCCCCceEE-EeECCccccCeeeccCCCCCcccCCCccccC-cCCC-eEEEEcCCC
Confidence 34788888885 345567777773 28999 999999974322111 1 1112233333 2322 234444311
Q ss_pred CCCCCCCcccccccccccccCCC-CCeEEEEEee-----cccee----------------eeecCCEEEEecccCCCCEE
Q 046696 378 KNGEPKSLKEDQQQVLDLTDVEL-GQEYELVVTT-----YAGLY----------------RYRVGDILKVAGFKNKAPQF 435 (609)
Q Consensus 378 ~~~~~~~~~~~~~~~l~~~eve~-G~~yelvvTt-----~~Gly----------------RYr~GDvv~v~gf~~~~P~i 435 (609)
. .+|.. |+.|||+|+. ..||| +|+|||+++++ ..+.+
T Consensus 461 ------------g-----~~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d----~dG~l 519 (663)
T 1ry2_A 461 ------------G-----EELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKD----KDGYI 519 (663)
T ss_dssp ------------T-----TCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEEC----TTCCE
T ss_pred ------------C-----CcCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEc----CCCCE
Confidence 1 13455 8999999976 34554 49999999998 46789
Q ss_pred EEEeecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCC-CCceEEEEEEEeeCCCCC--C-Ch---h
Q 046696 436 NFVCRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTST-IPGRYVLFWEISQSGATQ--I-PP---S 508 (609)
Q Consensus 436 ~f~gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~-~p~~Y~l~~E~~~~~~~~--~-~~---~ 508 (609)
.|+||.+|+|+++|++|.+.|||++|.+. . .|.+.+|+.-... ....-+.|+.+... ... . +. +
T Consensus 520 ~i~GR~dd~Ik~~G~rI~~~eIE~~l~~~------p--~V~ea~Vvg~~~~~~g~~~~a~Vv~~~~-~~~~~~~~~~~~~ 590 (663)
T 1ry2_A 520 WILGRVDDVVNVSGHRLSTAEIEAAIIED------P--IVAECAVVGFNDDLTGQAVAAFVVLKNK-SSWSTATDDELQD 590 (663)
T ss_dssp EECSCTTSCBCSSSCCBCHHHHHHHHHSS------T--TEEEEEEECCCCCTTSCCCEEEEEEC-------------CCS
T ss_pred EEEeecCCEEEECCEEcCHHHHHHHHHhC------C--CcceEEEEEEecCCCCeEEEEEEEEcCC-CccccccchhHHH
Confidence 99999999999999999999999999642 2 2456655432111 11123456666421 110 1 11 2
Q ss_pred hHHHHHHHHHHHhChHhHhhccCCCccCCeEEEEcC------CccHHHHHHHHHhcCCCCC--CCCCCcccCCHhHHHHH
Q 046696 509 VFEDCCLSIEESLNSVYRQGRVSDKSIGPLEIKLVE------SGTFDKLMDYALSQGASIN--QYKTPRCVKYAPIIELL 580 (609)
Q Consensus 509 ~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~iv~------~gtF~~~~~~~~~~G~~~~--Q~K~Pr~~~~~~~~~~L 580 (609)
..+++.+.+.+.|.. | ..|-+|.+|. .|-.. ...+.+-.... +++.+..+.|++.++.+
T Consensus 591 l~~~l~~~l~~~L~~-~---------~~P~~i~~v~~lP~T~sGKi~---R~~L~~~~~~~~~~~~~~~~l~~p~~~~~~ 657 (663)
T 1ry2_A 591 IKKHLVFTVRKDIGP-F---------AAPKLIILVDDLPKTRSGKIM---RRILRKILAGESDQLGDVSTLSNPGIVRHL 657 (663)
T ss_dssp HHHHHHHHHHHHTCT-T---------TSCSEEEECSCCCBCTTSCBC---HHHHHHSCC-------------CCHHHHHH
T ss_pred HHHHHHHHHHHhCCC-C---------cCCeEEEEcCCCCCCCccCch---HHHHHHHHcCCCCCCCCcccccCHHHHHHH
Confidence 233444444444422 1 2344455543 23222 22222211122 67888888999999988
Q ss_pred hc
Q 046696 581 NS 582 (609)
Q Consensus 581 ~~ 582 (609)
.+
T Consensus 658 ~~ 659 (663)
T 1ry2_A 658 ID 659 (663)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 29
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.53 E-value=4.9e-13 Score=151.42 Aligned_cols=152 Identities=11% Similarity=0.139 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCCC-
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMCN- 355 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~~- 355 (609)
.|.....|.+..... ....-.++ ++.+++||. ....+++.+.+ |++++ +.||+||+.+.........
T Consensus 281 ~P~~~~~l~~~~~~~----~~~~~l~~---lr~i~~gGe~l~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~ 351 (617)
T 3rg2_A 281 VPPAVSLWLQALIEG----ESRAQLAS---LKLLQVGGARLSATLAARIPAEI-GCQLQ-QVFGMAEGLVNYTRLDDSAE 351 (617)
T ss_dssp CHHHHHHHHHHHHTT----CCTTTTTT---CCEEEEESSCCCHHHHHHHHHHT-CSEEE-EEEEETTEEEEECCTTSCHH
T ss_pred chHHHHHHHHhhhcc----cccccCCC---ccEEEEcCCcCCHHHHHHHHHHh-CCcEE-EEeccCcceeecccCCCccc
Confidence 566566655544322 11122344 677777774 35567777777 89999 9999999865432111100
Q ss_pred --CCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee--------------e
Q 046696 356 --PSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------R 416 (609)
Q Consensus 356 --~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------R 416 (609)
....+..+.++. -+..++.+ + ..|++|+.|||+|+. ..||| +
T Consensus 352 ~~~~~~G~p~~~~~-~~~i~d~~--~----------------~~~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~ 412 (617)
T 3rg2_A 352 KIIHTQGYPMCPDD-EVWVADAE--G----------------NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGF 412 (617)
T ss_dssp HHHHCCCEESCTTC-EEEEECTT--S----------------CBCCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSC
T ss_pred ccccCCCccCCCCc-eEEEECCC--C----------------CCCCCCCceEEEecCccccchhcCChhhhhhccCCCCc
Confidence 001233322322 23333322 1 247789999999986 56776 3
Q ss_pred eecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 417 YRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 417 Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
|||||+++++ ..+.+.|+||.+|+++++|++|.+.+||++|.+
T Consensus 413 yrTGDl~~~~----~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~ 455 (617)
T 3rg2_A 413 YCSGDLISID----PEGYITVQGREKDQINRGGEKIAAEEIENLLLR 455 (617)
T ss_dssp EEEEEEEEEC----TTSCEEEEEECSSEEEETTEEEEHHHHHHHHTT
T ss_pred eecCceEEEc----CCceEEEEeecCCEEEECCEEeCHHHHHHHHHh
Confidence 9999999998 468999999999999999999999999999965
No 30
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=99.52 E-value=6.8e-14 Score=156.92 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCcc---chHHHHhhhcCCCCeeccccccccccccccC---CCC
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTMS---QYIPTLDYYSNGLPLVCTMYASSECYFGLNL---NPM 353 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~~---~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~---~~~ 353 (609)
.|..+..|.+...+ -+++ ++.+++||.. ....++.+.+++++++ +.||+||+...... ...
T Consensus 310 ~P~~~~~l~~~~~~---------~~~~---lr~~~~gG~~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~ 376 (570)
T 4gr5_A 310 SASLFNFLVDEVPE---------AFEG---VRYAITGGEPASVPHVAKARRDHPALRLG-NGYGPAESMGFTTHHAVVAG 376 (570)
T ss_dssp EHHHHHHHHHHCGG---------GGTT---CSEEEEESSCCCHHHHHHHHHHCTTCEEE-EEECCGGGCSCSEEEECCGG
T ss_pred cHHHHHHHHhhchh---------hCCC---ceEEEEecccCCHHHHHHHHHhCCCcEEE-Eeechhhheeeeeeeeeccc
Confidence 56666666543321 2344 5677777752 4566777778789999 99999997432111 000
Q ss_pred ---CCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---cccee------------
Q 046696 354 ---CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY------------ 415 (609)
Q Consensus 354 ---~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly------------ 415 (609)
......|.. .|+. -+..++ +.+ .++.+|+.|||+|++ +.|||
T Consensus 377 ~~~~~~~~iG~p-~~~~-~v~i~d--~~~----------------~~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~ 436 (570)
T 4gr5_A 377 DLSGTALPIGVP-LAGK-RAYVLD--DDL----------------KPAANGALGELYVAGAGLAHGYVSRPALTAERFVA 436 (570)
T ss_dssp GTTSSSCCCBEE-CTTE-EEEEEC--TTS----------------CBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEE
T ss_pred ccCCCcccccee-eCCC-EEEEEC--CCC----------------CCCCCCCcEEEEEeecccchhcCCCchhhhccccc
Confidence 000112332 2322 233333 211 257789999999976 56776
Q ss_pred ----------eeecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHH
Q 046696 416 ----------RYRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 416 ----------RYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a 464 (609)
+|||||+++++ ..+.+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 437 ~~~~~~~~~~w~~TGDlg~~d----~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~ 491 (570)
T 4gr5_A 437 DPFAGPGGERMYRTGDLARRR----ADGVLEYVGRADDQVKIRGFRVEPGEVEARLVGH 491 (570)
T ss_dssp CTTCCSSCCEEEEEEEEEEEC----TTSCEEEEEC------------------------
T ss_pred CCCCCCCCCEEEeCCCeEEEC----CCCeEEEEcccCCEEEECcEEeCHHHHHHHHhcC
Confidence 49999999998 4789999999999999999999999999999763
No 31
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=99.51 E-value=5.6e-13 Score=149.43 Aligned_cols=129 Identities=12% Similarity=0.210 Sum_probs=86.4
Q ss_pred eeEEEecCccchHHHHhhhcCCCCeeccccccccccccccC---CCCC--CCCCCceeeccCceEEEEEeCCCCCCCCCC
Q 046696 310 IDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNL---NPMC--NPSEVSYTLLPTMAYFEFLPVNRKNGEPKS 384 (609)
Q Consensus 310 l~~~~~G~~~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~---~~~~--~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 384 (609)
++.+++||.....+.++.+...++++ +.||+||+.+.... .... .+...|.+ .|+. -+..++.+ +
T Consensus 295 lr~~~~gG~~l~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p-~~~~-~v~i~d~~--~----- 364 (563)
T 1amu_A 295 IQTLITAGSATSPSLVNKWKEKVTYI-NAYGPTETTICATTWVATKETIGHSVPIGAP-IQNT-QIYIVDEN--L----- 364 (563)
T ss_dssp CSEEEEESSCCCHHHHHHHTTTSEEE-EEECCGGGSSCSEEEECCSSCCCSSCCCBEE-CTTE-EEEEECTT--S-----
T ss_pred ccEEEEEEecCCHHHHHHHHhCCeEE-EEECcCHHhHhheeeecccccCCCCCcccce-eCCC-EEEEECCC--c-----
Confidence 56777777533233344444357788 99999997532211 1100 11123333 2322 23333322 1
Q ss_pred cccccccccccccCCCCCeEEEEEee---cccee--------------------eeecCCEEEEecccCCCCEEEEEeec
Q 046696 385 LKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------------RYRVGDILKVAGFKNKAPQFNFVCRK 441 (609)
Q Consensus 385 ~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------------RYr~GDvv~v~gf~~~~P~i~f~gR~ 441 (609)
..+++|+.|||+|++ +.||| +|+|||+++++ ..+.+.|+||.
T Consensus 365 -----------~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d----~dG~l~i~GR~ 429 (563)
T 1amu_A 365 -----------QLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWL----SDGNIEYLGRI 429 (563)
T ss_dssp -----------CBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEEC----TTSCEEEEEEG
T ss_pred -----------CCCCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEc----CCCeEEEeccc
Confidence 246789999999986 56765 79999999998 46789999999
Q ss_pred CeeEeccccccCHHHHHHHHHH
Q 046696 442 NVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 442 ~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+|+|+++|++|++.+||++|.+
T Consensus 430 ~d~Ik~~G~~V~p~eIE~~l~~ 451 (563)
T 1amu_A 430 DNQVKIRGHRVELEEVESILLK 451 (563)
T ss_dssp GGEEEETTEEEEHHHHHHHHTT
T ss_pred cCEEEECCEEeCHHHHHHHHHh
Confidence 9999999999999999999965
No 32
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.50 E-value=8.4e-13 Score=145.29 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeeEEEecCc---cchHHHHhhhcCCCCeecccccccccccc-ccCCCC--
Q 046696 280 NTQLADFIEAECSKESWKGIITRLWPNTKYIDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFG-LNLNPM-- 353 (609)
Q Consensus 280 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~-i~~~~~-- 353 (609)
.|..+..|.+..... .. + ++.+++||. ....+++++ + +++++ +.||+||+... +...+.
T Consensus 258 ~P~~~~~l~~~~~~~-------~~--~---lr~i~~gG~~l~~~~~~~~~~-~-~~~~~-~~YG~TE~~~~~~~~~~~~~ 322 (501)
T 3ipl_A 258 VPQTLNWLMQQGLHE-------PY--N---LQKILLGGAKLSATMIETALQ-Y-NLPIY-NSFGMTETCSQFLTATPEML 322 (501)
T ss_dssp CHHHHHHHHHHTCCS-------CT--T---CCEEEECSSCCCHHHHHHHHH-T-TCCEE-EEEEEGGGTEEEEEECHHHH
T ss_pred hHHHHHHHHhcCCCC-------cC--c---ccEEEEeCCCCCHHHHHHHHH-h-CCCEe-ccccccccccceeecCcccc
Confidence 566666666544321 11 3 677777774 344455555 4 89999 99999996432 211110
Q ss_pred -CCCCCCceeeccCceEEEEEeCCCCCCCCCCcccccccccccccCCCCCeEEEEEee---ccceee------------e
Q 046696 354 -CNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLYR------------Y 417 (609)
Q Consensus 354 -~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~GlyR------------Y 417 (609)
..+...|.. .|+. -++.+++ .+|+.|||+|+. ..|||. |
T Consensus 323 ~~~~~~~G~p-~~~~-~~~i~d~-----------------------~~~~~GEl~v~g~~~~~gY~~~~~~t~~~~~g~~ 377 (501)
T 3ipl_A 323 HARPDTVGMP-SANV-DVKIKNP-----------------------NKEGHGELMIKGANVMNGYLYPTDLTGTFENGYF 377 (501)
T ss_dssp HHCTTCCBEE-CTTC-EEEEESC-----------------------CSSCCEEEEEESTTSCSCCSBSTTCCCSEETTEE
T ss_pred ccCCCCCCCC-CCCc-EEEEecC-----------------------CCCCccEEEEeccchhhhhCcChhhcchhcCCce
Confidence 111222332 1221 1222221 257789999976 567774 9
Q ss_pred ecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHH
Q 046696 418 RVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 418 r~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+|||+++++ ..+.+.|+||.+|+|+++|++|++.+||++|.+
T Consensus 378 ~TGDl~~~~----~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~ 419 (501)
T 3ipl_A 378 NTGDIAEID----HEGYVMIYDRRKDLIISGGENIYPYQIETVAKQ 419 (501)
T ss_dssp EEEEEEEEC----TTSCEEEEEECCCCEECSSCEECHHHHHHHHTT
T ss_pred ecCCEEEEc----CCCeEEEEccccceEEECCEEECHHHHHHHHHh
Confidence 999999998 468999999999999999999999999999865
No 33
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.50 E-value=1.8e-13 Score=163.14 Aligned_cols=131 Identities=14% Similarity=0.153 Sum_probs=75.6
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCC------CC-CCCCCCceeeccCceEEEEEeCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLN------PM-CNPSEVSYTLLPTMAYFEFLPVNRKN 379 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~------~~-~~~~~~~~~l~~~~~f~EFip~~~~~ 379 (609)
++.+++||. ....+++++.+|+++++ +.||+||+...+... +. ..+...|.+ .|+. -+++++++..
T Consensus 346 lr~~~~gg~~l~~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p-~~~~-~~~i~d~~~~- 421 (979)
T 3tsy_A 346 IRVVKSGAAPLGKELEDAVNAKFPNAKLG-QGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTV-VRNA-EMKIVDPDTG- 421 (979)
T ss_dssp CCEEEESSCCCCSSHHHHHHHHCTTCEEE-ECEECGGGCSEEEECGGGSSSCCCCCTTCCCEE-CSSC-EEEEECTTSC-
T ss_pred eEEEEEcCCCCCHHHHHHHHHHCCCCeEE-eeechhhhhHHHHhCCCCCCCccccCCCCcCcc-cCCc-EEEEEeCCCC-
Confidence 678888884 46678888888899999 999999975322111 10 111122332 2332 3445554321
Q ss_pred CCCCCcccccccccccccCCCCCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCEEEEEeecC
Q 046696 380 GEPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQFNFVCRKN 442 (609)
Q Consensus 380 ~~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~i~f~gR~~ 442 (609)
..|.+|+.|||+|+. ..||| +|||||+++++ ..+.+.|+||.+
T Consensus 422 ----------------~~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~----~dG~l~~~GR~d 481 (979)
T 3tsy_A 422 ----------------DSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLID----DDDELFIVDRLK 481 (979)
T ss_dssp ----------------CBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEEC----TTSCEEEEEESC
T ss_pred ----------------CCCCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEc----CCceEEEecCCC
Confidence 247789999999985 56776 39999999998 467999999999
Q ss_pred eeEeccccccCHHHHHHHHHHH
Q 046696 443 VALSIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 443 ~~l~~~GEkv~e~~v~~av~~a 464 (609)
|+|+++|++|.+.+||++|.+.
T Consensus 482 d~ik~~G~~v~~~eIE~~l~~~ 503 (979)
T 3tsy_A 482 ELIKYKGFQVAPAELEALLIGH 503 (979)
T ss_dssp C---------------------
T ss_pred CEEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999763
No 34
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.48 E-value=2.4e-13 Score=151.79 Aligned_cols=63 Identities=10% Similarity=0.092 Sum_probs=56.1
Q ss_pred cCCCCCeEEEEEee---ccceee-------------eecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHH
Q 046696 397 DVELGQEYELVVTT---YAGLYR-------------YRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNA 460 (609)
Q Consensus 397 eve~G~~yelvvTt---~~GlyR-------------Yr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~a 460 (609)
++.+|+.|||+|+. ..|||. |+|||++++. .+.+.|+||.+|+|+++|++|++.+||++
T Consensus 405 ~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~~-----dG~l~~~GR~dd~ik~~G~~v~p~eIE~~ 479 (576)
T 3gqw_A 405 PVAERVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYLL-----DGYLYVTGRIKDLIIIRGRNIWPQDIEYI 479 (576)
T ss_dssp BCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEEE-----TTEEEEEEETTTCEEETTEEECHHHHHHH
T ss_pred CCCCCCeEEEEEeCccccccccCCccccccccCCCeeeccceEEEE-----CCEEEEEecCcceEEECCEEECHHHHHHH
Confidence 47789999999986 578874 9999999884 57999999999999999999999999999
Q ss_pred HHHH
Q 046696 461 VKNA 464 (609)
Q Consensus 461 v~~a 464 (609)
|.+.
T Consensus 480 l~~~ 483 (576)
T 3gqw_A 480 AEQE 483 (576)
T ss_dssp HTTS
T ss_pred HHhC
Confidence 9763
No 35
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=99.45 E-value=4.4e-13 Score=152.17 Aligned_cols=130 Identities=16% Similarity=0.141 Sum_probs=88.5
Q ss_pred eeEEEecCcc---chHHHHhhhcCCCCeeccccccccccccccC---CCC---CCCCCCceeeccCceEEEEEeCCCCCC
Q 046696 310 IDVIVTGTMS---QYIPTLDYYSNGLPLVCTMYASSECYFGLNL---NPM---CNPSEVSYTLLPTMAYFEFLPVNRKNG 380 (609)
Q Consensus 310 l~~~~~G~~~---~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~---~~~---~~~~~~~~~l~~~~~f~EFip~~~~~~ 380 (609)
++.+++||.. ...+++.+.+++++++ +.||+||+.+.... .+. ..+...|.. .++. -+..++.+.
T Consensus 278 lr~v~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~d~~~--- 351 (620)
T 4dg8_A 278 LRQLLTGGDILSVPHVRRALLRHPRLHLV-NGYGPTENTTFTCCHVVTDDDLEEDDIPIGKA-IAGT-AVLLLDEHG--- 351 (620)
T ss_dssp CSEEEEESSCCCHHHHHHHHHHCTTCEEE-EEECCGGGCSCSEEEECCTGGGGSSSCCCBEE-CTTE-EEEEECTTS---
T ss_pred ccEEEEEeCcCCHHHHHHHHHhCCCeEEE-eeEchhhhhhheEEEeccccccCCCCCCceec-ccCc-EEEEECccC---
Confidence 5677777742 3445555566789999 99999997542211 110 011122332 2322 233344221
Q ss_pred CCCCcccccccccccccCCCCCeEEEEEee---cccee---------------------eeecCCEEEEecccCCCCEEE
Q 046696 381 EPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY---------------------RYRVGDILKVAGFKNKAPQFN 436 (609)
Q Consensus 381 ~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly---------------------RYr~GDvv~v~gf~~~~P~i~ 436 (609)
+. -+++|+.|||+|.. ..||| +|||||+++++ ..+.+.
T Consensus 352 ----------~~----~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~----~dG~l~ 413 (620)
T 4dg8_A 352 ----------QE----IAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYD----EQGRLR 413 (620)
T ss_dssp ----------CB----CCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEEC----TTSCEE
T ss_pred ----------CC----CCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEEC----CCCeEE
Confidence 11 15689999999975 45664 49999999998 478999
Q ss_pred EEeecCeeEeccccccCHHHHHHHHHH
Q 046696 437 FVCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 437 f~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
|+||.+|+|+++|++|.+.|||++|.+
T Consensus 414 ~~GR~dd~Ik~~G~ri~~~eIE~~l~~ 440 (620)
T 4dg8_A 414 FIGRGDGQVKLNGYRLDLPALEQRFRR 440 (620)
T ss_dssp EEECSSSEEEETTEEEEHHHHHHHHHT
T ss_pred EEccCCCEEEECCEEcCHHHHHHHHHh
Confidence 999999999999999999999999976
No 36
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=99.43 E-value=5.9e-13 Score=148.32 Aligned_cols=128 Identities=16% Similarity=0.161 Sum_probs=84.2
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCC-------------CCCCCceeeccCceEEEEE
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMC-------------NPSEVSYTLLPTMAYFEFL 373 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~-------------~~~~~~~~l~~~~~f~EFi 373 (609)
++.+++||. ....+++ +.+ |++++ +.||+||+...+...... .+...|.+ .|+. -++++
T Consensus 295 lr~i~~gG~~l~~~~~~~~-~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p-~~~~-~~~i~ 369 (541)
T 1v25_A 295 LRRLVVGGSAAPRSLIARF-ERM-GVEVR-QGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLP-IPLV-RLRVA 369 (541)
T ss_dssp CCEEEECSSCCCHHHHHHH-HHT-TCEEE-EEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEE-CTTC-EEEEE
T ss_pred ccEEEECCCCCCHHHHHHH-HHh-CCcee-ecccccccccceecccccccccccCccccccccCCCCCc-CCCc-EEEEE
Confidence 677778875 3455666 456 89998 999999975322211110 00122332 2322 23444
Q ss_pred eCCCCCCCCCCcccccccccccccCCC--CCeEEEEEee---cccee--------------eeecCCEEEEecccCCCCE
Q 046696 374 PVNRKNGEPKSLKEDQQQVLDLTDVEL--GQEYELVVTT---YAGLY--------------RYRVGDILKVAGFKNKAPQ 434 (609)
Q Consensus 374 p~~~~~~~~~~~~~~~~~~l~~~eve~--G~~yelvvTt---~~Gly--------------RYr~GDvv~v~gf~~~~P~ 434 (609)
+.+. + ++.. |+.|||+|+. +.||| +|||||+++++ ..+.
T Consensus 370 d~~g-------------~-----~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d----~dG~ 427 (541)
T 1v25_A 370 DEEG-------------R-----PVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWD----EEGY 427 (541)
T ss_dssp CTTS-------------C-----BCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEEC----TTCC
T ss_pred CCCC-------------C-----CCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEc----CCce
Confidence 4221 1 2442 3689999986 56777 49999999998 3679
Q ss_pred EEEEeecCeeEeccccccCHHHHHHHHHHH
Q 046696 435 FNFVCRKNVALSIDSDKTDEVELQNAVKNA 464 (609)
Q Consensus 435 i~f~gR~~~~l~~~GEkv~e~~v~~av~~a 464 (609)
+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 428 l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~ 457 (541)
T 1v25_A 428 VEIKDRLKDLIKSGGEWISSVDLENALMGH 457 (541)
T ss_dssp EEEEEESSCEEEETTEEEEHHHHHCC----
T ss_pred EEEeecccceeeeCCEEECHHHHHHHHHhC
Confidence 999999999999999999999999999763
No 37
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.38 E-value=1.1e-12 Score=139.03 Aligned_cols=120 Identities=11% Similarity=0.189 Sum_probs=78.6
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCCCCCCCCceeeccCceEEEEEeCCCCCCCCCCcc
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPMCNPSEVSYTLLPTMAYFEFLPVNRKNGEPKSLK 386 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 386 (609)
++.+++||. ....+++++ + |++++ +.||+||+...+...+...+... ..+ ++...
T Consensus 150 lr~v~~gG~~l~~~~~~~~~~-~-~~~~~-~~YG~TEt~~~~~~~~~~~~~~g-------~~~---~~~pg--------- 207 (358)
T 4gs5_A 150 LGKVLLGGAPVNHALAMQISD-L-AMPVY-QSYGMTETVSHVALKALNGPEAS-------ELY---VFLPG--------- 207 (358)
T ss_dssp GCSEEECSSCCCHHHHHHHHT-C-SSCEE-EEEECGGGSSEEEEEECSSTTCC-------SCE---EECTT---------
T ss_pred ceEEEEcccCCCchheecccc-c-CceEE-eccccccccceeecccccccccc-------eee---ccCCC---------
Confidence 567777775 244455554 3 79999 99999997544332222111100 000 12111
Q ss_pred cccccccccccCCCCCeEEEEEeec-cceeeeecCCEEEEecccCCCCEEEEEeecCeeEeccccccCHHHHHHHHHHHH
Q 046696 387 EDQQQVLDLTDVELGQEYELVVTTY-AGLYRYRVGDILKVAGFKNKAPQFNFVCRKNVALSIDSDKTDEVELQNAVKNAA 465 (609)
Q Consensus 387 ~~~~~~l~~~eve~G~~yelvvTt~-~GlyRYr~GDvv~v~gf~~~~P~i~f~gR~~~~l~~~GEkv~e~~v~~av~~a~ 465 (609)
.++..++.+||+++.. ..=.+|||||+++++. . .+.|+||.+|+|+++|+||++.+||++|....
T Consensus 208 ---------v~~~~~~~Gel~~~g~~~~~g~~~TGDlg~~d~----~-g~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~ 273 (358)
T 4gs5_A 208 ---------IQYGVDERGCLHISGAVTNGQTVQTNDLVEIHG----N-AFQWIGRADNVINSGGVKIVLDQIDQRIAAVF 273 (358)
T ss_dssp ---------CEEEECTTSEEEEESGGGTTCCEEEEEEEEECS----S-EEEEEEEGGGEEEETTEEEEHHHHHHHHHHHH
T ss_pred ---------eEEEecCcCceEEecccccCcceecCCcccccc----C-ceEEcccccCeEEECCEEECHHHHHHHHHHhc
Confidence 1344567789998752 1123689999999984 2 37899999999999999999999999887643
No 38
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.33 E-value=7.3e-12 Score=153.47 Aligned_cols=129 Identities=13% Similarity=0.164 Sum_probs=89.5
Q ss_pred eeEEEecCc---cchHHHHhhhcCCCCeeccccccccccccccCCCC-C-----CCCCCceeeccCceEEEEEeCCCCCC
Q 046696 310 IDVIVTGTM---SQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPM-C-----NPSEVSYTLLPTMAYFEFLPVNRKNG 380 (609)
Q Consensus 310 l~~~~~G~~---~~y~~~l~~~~~g~~~~~~~YgaSEg~~~i~~~~~-~-----~~~~~~~~l~~~~~f~EFip~~~~~~ 380 (609)
++++++||. ....+++.+.+++++++ +.||.||+.+....... . .+...|.+ .++.. +..++.+ .
T Consensus 722 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~--~- 795 (1304)
T 2vsq_A 722 LRCILFGGERASVPHVRKALRIMGPGKLI-NCYGPTEGTVFATAHVVHDLPDSISSLPIGKP-ISNAS-VYILNEQ--S- 795 (1304)
T ss_dssp CSEEEEESSCCCHHHHHHHHHHHCTTCEE-EEECCGGGSSCSEEEECCCCCSSCSSCCCBEE-CTTEE-EEEECTT--S-
T ss_pred ccEEEEecCCCCHHHHHHHHHhCCCCEEE-EeEChhHHhHHheeeeccCccccCCCCCCcee-eCCCE-EEEECCC--c-
Confidence 567777774 24556666777778899 99999998543221110 0 00112332 23322 2222221 1
Q ss_pred CCCCcccccccccccccCCCCCeEEEEEee---cccee--------------------eeecCCEEEEecccCCCCEEEE
Q 046696 381 EPKSLKEDQQQVLDLTDVELGQEYELVVTT---YAGLY--------------------RYRVGDILKVAGFKNKAPQFNF 437 (609)
Q Consensus 381 ~~~~~~~~~~~~l~~~eve~G~~yelvvTt---~~Gly--------------------RYr~GDvv~v~gf~~~~P~i~f 437 (609)
..|++|+.|||+|+. ..||| +|||||+++.. ..+.++|
T Consensus 796 ---------------~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~----~dG~l~~ 856 (1304)
T 2vsq_A 796 ---------------QLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWL----PDGTIEY 856 (1304)
T ss_dssp ---------------CBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEEC----TTSCEEE
T ss_pred ---------------CCCCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEc----CCCeEEE
Confidence 246789999999986 45654 69999999998 4789999
Q ss_pred EeecCeeEeccccccCHHHHHHHHHH
Q 046696 438 VCRKNVALSIDSDKTDEVELQNAVKN 463 (609)
Q Consensus 438 ~gR~~~~l~~~GEkv~e~~v~~av~~ 463 (609)
+||.+++++++|++|.+.|||.+|.+
T Consensus 857 ~GR~d~qvki~G~rie~~eIE~~l~~ 882 (1304)
T 2vsq_A 857 AGRIDDQVKIRGHRIELEEIEKQLQE 882 (1304)
T ss_dssp EEEGGGEEEETTEEEEHHHHHHHHHH
T ss_pred EcCCCCEEEECCEeeCHHHHHHHHHh
Confidence 99999999999999999999999976
No 39
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=98.83 E-value=9.2e-09 Score=111.93 Aligned_cols=39 Identities=23% Similarity=0.230 Sum_probs=32.7
Q ss_pred cCCCCCeEEEEEee---cccee-------------------------eeecCCEEEEecccCCCCEEEEEee
Q 046696 397 DVELGQEYELVVTT---YAGLY-------------------------RYRVGDILKVAGFKNKAPQFNFVCR 440 (609)
Q Consensus 397 eve~G~~yelvvTt---~~Gly-------------------------RYr~GDvv~v~gf~~~~P~i~f~gR 440 (609)
++++|+.|||+|.. +.||| +|||||+++++ .+.+.|+||
T Consensus 414 ~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-----dG~l~~~GR 480 (480)
T 3t5a_A 414 ECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-----DGKMFIIGR 480 (480)
T ss_dssp ECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-----TTEEEECC-
T ss_pred CCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE-----CCEEEEeCC
Confidence 47889999999976 67776 79999999885 579999998
No 40
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=97.17 E-value=0.00086 Score=57.88 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=56.3
Q ss_pred ecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEeeCCCCCCChhhHHHHHHHHHH
Q 046696 440 RKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPGRYVLFWEISQSGATQIPPSVFEDCCLSIEE 519 (609)
Q Consensus 440 R~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~~~~~~~~~~~~~l~~~~~~ld~ 519 (609)
|++|||+++|.|++|.+||++|.+. .++. ..+.+..+.......-.+++++.. ....+...++.+++.+-+
T Consensus 2 rADDmIiv~G~nv~P~eIE~vl~~~------p~v~-~~~vv~v~~~~~~~~~~~~V~~~~--~~~~~~~~~~~l~~~i~~ 72 (109)
T 3lax_A 2 NADDMIILKGVNIFPIQIETILLQF------KELG-SDYLITLETAESNDEMTVEVELSQ--LFTDDYGRLQALTREITR 72 (109)
T ss_dssp GGGSCEEETTEEECHHHHHHHHHTC------TTEE-EEEEEEEEEETTEEEEEEEEEECT--TCCCCHHHHHHHHHHHHH
T ss_pred CcCEEEEECCEEECHHHHHHHHHhC------CCcc-cceEEEEeccccceeEEEEEEEee--ccccccchhhhhHHHHHH
Confidence 8999999999999999999999652 2321 123332222112223456677653 223344556666666666
Q ss_pred HhChHhHhhccCCCccCCeEEEEcCCccHH
Q 046696 520 SLNSVYRQGRVSDKSIGPLEIKLVESGTFD 549 (609)
Q Consensus 520 ~Ln~~Y~~~R~~~g~l~p~~v~iv~~gtF~ 549 (609)
++.. ..| + ++.|.+|++|++.
T Consensus 73 ~l~~-------~~g-v-~~~v~~v~~~~lP 93 (109)
T 3lax_A 73 QLKD-------EIL-V-TPRVKLVPKGALP 93 (109)
T ss_dssp HHHH-------HHS-S-CCEEEEECTTCSC
T ss_pred HHHH-------HhC-C-ccceEEEcCCeec
Confidence 5533 111 3 4579999999887
No 41
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=96.96 E-value=0.0017 Score=56.19 Aligned_cols=94 Identities=11% Similarity=0.104 Sum_probs=55.8
Q ss_pred eecCeeEeccccccCHHHHHHHHHHHHhhcCCCCceEEeEEEeecCCCCCceEEEEEEEeeCCCCCCChhhHHHHHHHHH
Q 046696 439 CRKNVALSIDSDKTDEVELQNAVKNAANHLSPFDASLIEYTSYADTSTIPGRYVLFWEISQSGATQIPPSVFEDCCLSIE 518 (609)
Q Consensus 439 gR~~~~l~~~GEkv~e~~v~~av~~a~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~E~~~~~~~~~~~~~l~~~~~~ld 518 (609)
||.+|||+++|.|+++.+||++|.+. + ++. ..|.+..+.....-.-++++|+ . +....+....+.+++.+.
T Consensus 1 GR~~D~Iiv~G~nv~P~eIE~~l~~~-p-----~v~-~~~~v~v~~~~~~e~l~~~ve~-~-~~~~~~~~~~~~l~~~i~ 71 (109)
T 3gxs_A 1 SNADDMIILKGVNIFPIQIETILLQF-K-----ELG-SDYLITLETAESNDEMTVEVEL-S-QLFTDDYGRLQALTREIT 71 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTC-T-----TEE-EEEEEEEEEETTEEEEEEEEEE-C-TTCCCCHHHHHHHHHHHH
T ss_pred CCccCEEEECCEEECHHHHHHHHHhC-C-----CcC-CcEEEEEEcCCCceEEEEEEEE-c-CccccchhHHHHHHHHHH
Confidence 79999999999999999999999762 2 221 1344332221111244577887 3 211111223445555555
Q ss_pred HHhChHhHhhccCCCccCCeEEEEcCCccHHH
Q 046696 519 ESLNSVYRQGRVSDKSIGPLEIKLVESGTFDK 550 (609)
Q Consensus 519 ~~Ln~~Y~~~R~~~g~l~p~~v~iv~~gtF~~ 550 (609)
+.+.. .. .+. ++|.+|++|++.+
T Consensus 72 ~~l~~-------~~-~~~-~~v~~v~~~~lPr 94 (109)
T 3gxs_A 72 RQLKD-------EI-LVT-PRVKLVPKGALPK 94 (109)
T ss_dssp HHHHH-------HH-SSC-CEEEEECTTCSCC
T ss_pred HHHHH-------hh-CCc-eEEEEECCCCccC
Confidence 55532 11 243 4899999998773
No 42
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=30.13 E-value=1.4e+02 Score=23.55 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHHHHHhhcCCC-CceEEeEEEeecCCCCCceEEEEEEEee
Q 046696 451 KTDEVELQNAVKNAANHLSPF-DASLIEYTSYADTSTIPGRYVLFWEISQ 499 (609)
Q Consensus 451 kv~e~~v~~av~~a~~~l~~~-g~~l~~f~~~~d~~~~p~~Y~l~~E~~~ 499 (609)
+=.++.+++||.+|+++++.- +++|.+..+..+. +.-.||.+-+.+.|
T Consensus 16 ~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lKV~F 64 (72)
T 3onr_A 16 TSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDS-AGKITYRIKLEVSF 64 (72)
T ss_dssp SCHHHHHHHHHHHHHHHCSCCCEEEEEEEEEEECT-TCCEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 445889999999999987533 4677788776654 45679998888876
No 43
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=26.49 E-value=1.6e+02 Score=22.91 Aligned_cols=48 Identities=10% Similarity=0.073 Sum_probs=34.5
Q ss_pred ccCHHHHHHHHHHHHhhcCCC-CceEEeEEEeecCCCCCceEEEEEEEee
Q 046696 451 KTDEVELQNAVKNAANHLSPF-DASLIEYTSYADTSTIPGRYVLFWEISQ 499 (609)
Q Consensus 451 kv~e~~v~~av~~a~~~l~~~-g~~l~~f~~~~d~~~~p~~Y~l~~E~~~ 499 (609)
+=.++.+++||.+|+++++.. ++++.+..+..+. +.-.||.+-+.+.|
T Consensus 14 ~S~edAi~nAi~~AskTl~ni~~~eV~e~~~~v~d-gkv~~yqv~lKV~F 62 (68)
T 2cc6_A 14 ESFTAAADDAIDRAEDTLDNVVWAEVVDQGVEIGA-VEERTYQTEVQVAF 62 (68)
T ss_dssp SCHHHHHHHHHHHHHHHCSCEEEEEEEEEEEECTT-SSSCEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcccCCeEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 445889999999999987422 3566677665543 35569998888876
No 44
>1lbj_A Motilin; A-helix, B-turn of type I, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=20.75 E-value=49 Score=20.46 Aligned_cols=17 Identities=24% Similarity=0.599 Sum_probs=14.5
Q ss_pred CCCCChhchhHHHHHHh
Q 046696 75 MPVITYEDLKPYVDRIA 91 (609)
Q Consensus 75 vPl~~Yedl~p~ier~~ 91 (609)
||+.+|.+++.-.|+-.
T Consensus 2 vPiFt~selqr~qEkEr 18 (26)
T 1lbj_A 2 VPIFTYGELQRMQEKER 18 (26)
T ss_dssp CCTTCHHHHHHHHHHHH
T ss_pred CceeeHHHHHHHHHHHh
Confidence 89999999988777765
Done!