Query 046701
Match_columns 187
No_of_seqs 107 out of 1133
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 05:44:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3etc_A AMP-binding protein; ad 100.0 2.7E-36 9.2E-41 258.8 13.1 183 3-187 322-578 (580)
2 4fuq_A Malonyl COA synthetase; 100.0 8.2E-36 2.8E-40 251.7 14.9 183 3-187 248-499 (503)
3 3ni2_A 4-coumarate:COA ligase; 100.0 3E-35 1E-39 249.9 15.8 183 3-187 277-534 (536)
4 1mdb_A 2,3-dihydroxybenzoate-A 100.0 6.7E-35 2.3E-39 248.0 12.0 182 3-186 278-529 (539)
5 3r44_A Fatty acyl COA syntheta 100.0 1.2E-34 4.1E-39 245.3 12.8 182 3-187 264-512 (517)
6 1t5h_X 4-chlorobenzoyl COA lig 100.0 4.6E-34 1.6E-38 240.9 13.7 182 3-187 250-503 (504)
7 2d1s_A Luciferase, luciferin 4 100.0 6.4E-34 2.2E-38 242.4 13.3 182 3-186 289-541 (548)
8 4dg8_A PA1221; ANL superfamily 100.0 4.1E-34 1.4E-38 247.0 12.0 182 3-186 259-511 (620)
9 3c5e_A Acyl-coenzyme A synthet 100.0 1.4E-33 4.9E-38 241.4 15.2 183 3-186 303-560 (570)
10 1pg4_A Acetyl-COA synthetase; 100.0 1.2E-33 4.2E-38 245.2 14.7 182 3-186 356-619 (652)
11 4gr5_A Non-ribosomal peptide s 100.0 2.1E-34 7.3E-39 246.4 9.0 181 3-185 309-568 (570)
12 3g7s_A Long-chain-fatty-acid-- 100.0 2.4E-34 8.3E-39 244.9 9.3 168 17-186 293-540 (549)
13 2v7b_A Benzoate-coenzyme A lig 100.0 2E-33 6.8E-38 238.2 14.7 181 3-185 280-529 (529)
14 1amu_A GRSA, gramicidin synthe 100.0 1.1E-33 3.8E-38 241.7 12.5 177 4-185 280-526 (563)
15 3o83_A Peptide arylation enzym 100.0 1E-34 3.5E-39 247.1 5.9 183 3-187 287-539 (544)
16 3l8c_A D-alanine--poly(phospho 100.0 5.5E-34 1.9E-38 241.1 9.7 171 15-187 259-511 (521)
17 3nyq_A Malonyl-COA ligase; A/B 100.0 1.1E-33 3.9E-38 238.8 11.0 165 18-184 270-504 (505)
18 3fce_A D-alanine--poly(phospho 100.0 2.1E-33 7E-38 237.2 12.5 181 3-186 241-502 (512)
19 3ite_A SIDN siderophore synthe 100.0 4.3E-34 1.5E-38 243.8 8.1 182 3-187 278-542 (562)
20 1v25_A Long-chain-fatty-acid-C 100.0 3.8E-34 1.3E-38 243.5 7.6 183 3-187 273-535 (541)
21 3rix_A Luciferase, luciferin 4 100.0 6.4E-34 2.2E-38 242.4 8.7 182 3-186 287-539 (550)
22 3e7w_A D-alanine--poly(phospho 100.0 6.8E-33 2.3E-37 234.1 13.2 181 3-186 240-501 (511)
23 3rg2_A Enterobactin synthase c 100.0 9.3E-33 3.2E-37 238.2 12.0 168 17-186 299-532 (617)
24 3tsy_A Fusion protein 4-coumar 100.0 1.5E-32 5E-37 247.6 12.3 182 3-186 324-580 (979)
25 3ipl_A 2-succinylbenzoate--COA 100.0 1.2E-32 4.2E-37 231.9 8.2 176 3-186 257-495 (501)
26 1ry2_A Acetyl-coenzyme A synth 100.0 7.3E-32 2.5E-36 234.5 13.3 182 3-186 362-635 (663)
27 3ivr_A Putative long-chain-fat 100.0 1E-32 3.5E-37 232.8 7.5 177 4-187 255-500 (509)
28 3gqw_A Fatty acid AMP ligase; 100.0 1.7E-31 5.8E-36 227.8 10.0 169 15-186 294-561 (576)
29 2vsq_A Surfactin synthetase su 100.0 1.3E-30 4.6E-35 240.5 9.5 180 3-184 703-956 (1304)
30 3kxw_A Saframycin MX1 syntheta 100.0 2.3E-30 7.8E-35 221.7 6.7 167 15-186 284-565 (590)
31 4gs5_A Acyl-COA synthetase (AM 99.9 6.3E-28 2.1E-32 195.9 8.4 160 3-187 129-353 (358)
32 3qov_A Phenylacetate-coenzyme 99.9 6.1E-25 2.1E-29 182.0 6.2 149 18-182 204-431 (436)
33 2y4o_A Phenylacetate-coenzyme 99.9 3E-24 1E-28 178.2 4.4 153 19-184 211-440 (443)
34 2y27_A Phenylacetate-coenzyme 99.9 9.1E-24 3.1E-28 175.0 6.9 149 19-181 209-432 (437)
35 3t5a_A Long-chain-fatty-acid-- 99.8 4.4E-21 1.5E-25 160.2 7.4 118 15-134 306-477 (480)
36 3hgu_A EHPF; phenazine, antibi 99.3 3.4E-13 1.1E-17 109.2 2.1 109 4-128 212-340 (369)
37 3lax_A Phenylacetate-coenzyme 98.0 6.6E-07 2.2E-11 59.9 0.1 39 146-186 67-109 (109)
38 3gxs_A Phenylacetate-coenzyme 97.4 6.9E-05 2.3E-09 49.9 2.0 36 143-180 64-102 (109)
39 4b2g_A GH3-1 auxin conjugating 91.4 0.33 1.1E-05 41.6 5.9 53 83-150 392-460 (609)
40 4eql_A 4-substituted benzoates 85.0 2.3 7.8E-05 36.3 6.9 110 22-148 302-446 (581)
41 4epl_A Jasmonic acid-amido syn 76.6 6.4 0.00022 33.5 6.7 97 39-150 328-455 (581)
42 3e8v_A Possible transglutamina 22.4 1.4E+02 0.0048 18.2 5.7 15 72-86 3-17 (82)
No 1
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.7e-36 Score=258.79 Aligned_cols=183 Identities=20% Similarity=0.304 Sum_probs=138.8
Q ss_pred cccchHhhhhh--cCCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeecc--CCCCCCCCCCCccccc-c
Q 046701 3 MNPLSIHGAAQ--LTITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFVL--LPKNGPHKASSVGKPV-R 71 (187)
Q Consensus 3 ~~~~~~~~~~~--~~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~~--~~~~~~~~~~~~G~~~-~ 71 (187)
.+|.++..+.+ ....++++||.+++||+++++++. +|+.+++.||+++++.. .........+++|+|+ +
T Consensus 322 ~~P~~~~~l~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~~ 401 (580)
T 3etc_A 322 APPTIYRFLIKEDLSHYNFSTLKYAVVAGEPLNPEVFNRFLEFTGIKLMEGFGQTETVVTIATFPWMEPKPGSIGKPTPG 401 (580)
T ss_dssp ECHHHHHHHHTSCC---CCTTCCEEEECSSCCCHHHHHHHHHHHSCCCEEEECCTTSSCCEECCTTSCCCTTCCBEECTT
T ss_pred ccHHHHHHHHhcccccCCCccceEEEEccCCCCHHHHHHHHHHhCCeEecccccccccceeecCCCCCCCCCccccCCCC
Confidence 34555555543 234568999999999999999987 68999999999443221 1122345678999999 9
Q ss_pred eeEEEeCCCCCcCCCCCceeEEEEeC-----CCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE----------
Q 046701 72 REMAIPDENGVDQKANVNGKMCIREG-----PMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM---------- 134 (187)
Q Consensus 72 ~~v~i~~~~g~~~~~g~~Gel~v~~~-----~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~---------- 134 (187)
++++|+|++|++|++|+.|||+|+ + +.++ ||++++.+...|.+|||+|||+|++|+||++++
T Consensus 402 ~~v~ivd~~g~~~~~g~~GEl~v~-~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~ 480 (580)
T 3etc_A 402 YKIELMDRDGRLCEVGEEGEIVIN-TMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAWMDEDGYLWFVGRADDIIKT 480 (580)
T ss_dssp CEEEEECTTSCBCCTTCCEEEEEE-CTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEEECTTSCEEEEEESSSCEEE
T ss_pred CEEEEECCCCCCCCCCCceEEEEe-cCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEEECCCCcEEEEecCCCEEEE
Confidence 999999999999999999999999 8 6677 999999999999999999999999999999999
Q ss_pred --EEeCcccHHHH--------------------------------------------HHHHHhcCcCCCCccEEEEecCC
Q 046701 135 --WKISPTEVDAV--------------------------------------------KEFCKRNVASFKVPKKVFIADSL 168 (187)
Q Consensus 135 --~~i~~~eiE~~--------------------------------------------~~~~~~~l~~~~~P~~i~~v~~l 168 (187)
++|+|.|||++ +++++++|++|++|+.|+++++|
T Consensus 481 ~G~~I~p~eIE~~l~~~p~V~~a~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~l 560 (580)
T 3etc_A 481 SGYKVGPFEVESALIQHPAVLECAITGVPDPVRGQVIKATIVLTKDYTPSDSLKNELQDHVKNVTAPYKYPRIIEFVPEL 560 (580)
T ss_dssp TTEEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHSCGGGCCSEEEEECC-
T ss_pred CCEEECHHHHHHHHHhCCCeeeEEEEeeeccCCCcEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCccCCeEEEEeCCC
Confidence 89999999998 67788899999999999999999
Q ss_pred CCCCCCCcccHHHHHhhhC
Q 046701 169 SGKPLTGKIQRRIVAELRK 187 (187)
Q Consensus 169 P~~t~~GKi~r~~l~~~~~ 187 (187)
| +|++|||+|+.|+++++
T Consensus 561 P-~t~sGKi~R~~Lr~~~~ 578 (580)
T 3etc_A 561 P-KTISGKIRRVEIRDKDQ 578 (580)
T ss_dssp -------------------
T ss_pred C-CCCCcCCcHHHHHhHhh
Confidence 9 99999999999998763
No 2
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=8.2e-36 Score=251.71 Aligned_cols=183 Identities=26% Similarity=0.397 Sum_probs=157.8
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeec--cCCCCCCCCCCCccccc-
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFV--LLPKNGPHKASSVGKPV- 70 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~- 70 (187)
.+|.++..+.. ....++++||.+++||+++++++. ++..+++.||+++++. ..........+++|+|+
T Consensus 248 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~ 327 (503)
T 4fuq_A 248 GVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSNPYDGDRVPGAVGPALP 327 (503)
T ss_dssp ECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEECBCCCSSSCCCTTEEEEBCT
T ss_pred EHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCcccccCCCCCCcCCccccCCC
Confidence 34555555443 234567899999999999999887 6889999999944332 22222344568899999
Q ss_pred ceeEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE------------
Q 046701 71 RREMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM------------ 134 (187)
Q Consensus 71 ~~~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~------------ 134 (187)
+++++|+| ++|+++++|++|||+|+ |++++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 328 ~~~~~i~d~~~g~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G 406 (503)
T 4fuq_A 328 GVSARVTDPETGKELPRGDIGMIEVK-GPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGG 406 (503)
T ss_dssp TCEEEEECTTTCCBCCTTCCEEEEEE-STTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEETT
T ss_pred CeEEEEEECCCCCCCcCCCceEEEEE-CCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEECC
Confidence 99999999 88999999999999999 99999 9999999999997 79999999999999999999
Q ss_pred EEeCcccHHHH-----------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCC
Q 046701 135 WKISPTEVDAV-----------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPL 173 (187)
Q Consensus 135 ~~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~ 173 (187)
++|+|.|||++ +++++++|+.|++|+.|+++++|| +|+
T Consensus 407 ~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~ 485 (503)
T 4fuq_A 407 FNVYPKEIESEIDAMPGVVESAVIGVPHADFGEGVTAVVVRDKGATIDEAQVLHGLDGQLAKFKMPKKVIFVDDLP-RNT 485 (503)
T ss_dssp EEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHBTTBCGGGCCSEEEEESCCC-BCT
T ss_pred EEECHHHHHHHHHhCCCeeEEEEEEeEchhcCceeEEEEEeCCCCCCCHHHHHHHHHhhcccCCCCCEEEEECCCC-CCc
Confidence 89999999998 678889999999999999999999 999
Q ss_pred CCcccHHHHHhhhC
Q 046701 174 TGKIQRRIVAELRK 187 (187)
Q Consensus 174 ~GKi~r~~l~~~~~ 187 (187)
+||++|+.|++.++
T Consensus 486 ~GKi~R~~L~~~~~ 499 (503)
T 4fuq_A 486 MGKVQKNVLRETYK 499 (503)
T ss_dssp TSCBCHHHHHHHTT
T ss_pred ccceeHHHHHHHHH
Confidence 99999999999874
No 3
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=3e-35 Score=249.89 Aligned_cols=183 Identities=27% Similarity=0.458 Sum_probs=156.4
Q ss_pred cccchHhhhhhc---CCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeec-------cCCCCCCCCCCC
Q 046701 3 MNPLSIHGAAQL---TITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFV-------LLPKNGPHKASS 65 (187)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~-------~~~~~~~~~~~~ 65 (187)
.+|.++..+.+. ...++++||.+++||+++++++. + ++.+++.||+++++. ..........++
T Consensus 277 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~ 356 (536)
T 3ni2_A 277 VVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGA 356 (536)
T ss_dssp ECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTC
T ss_pred ccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCCCccccccccccchhhhcccccCCccccCCCCC
Confidence 345555554432 34578999999999999999887 5 889999999943321 112223446789
Q ss_pred ccccc-ceeEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE------
Q 046701 66 VGKPV-RREMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM------ 134 (187)
Q Consensus 66 ~G~~~-~~~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~------ 134 (187)
+|+|+ +++++|+| ++|.+++.|++|||+++ |++++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 357 ~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~-g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd 435 (536)
T 3ni2_A 357 CGTVVRNAEMKIVDPETGASLPRNQPGEICIR-GDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKE 435 (536)
T ss_dssp CCEECSSCEEEEECTTTCCBCCTTCCEEEEEE-STTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSC
T ss_pred eeEeCCCcEEEEEeCCCCcCCCCCCccEEEEe-CcccchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccc
Confidence 99999 99999999 67999999999999999 99999 9999999998884 79999999999999999999
Q ss_pred ------EEeCcccHHHH-----------------------------------------HHHHHhcCcCCCCccEEEEecC
Q 046701 135 ------WKISPTEVDAV-----------------------------------------KEFCKRNVASFKVPKKVFIADS 167 (187)
Q Consensus 135 ------~~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~~i~~v~~ 167 (187)
++|+|.|||++ +++++++|+.|++|+.|+++++
T Consensus 436 ~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~ 515 (536)
T 3ni2_A 436 LIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEA 515 (536)
T ss_dssp CEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHTTSCGGGCCSEEEECSC
T ss_pred eEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCCCCceeEEEEEecCCCCCCHHHHHHHHHHhccCCccccEEEEEec
Confidence 89999999998 7889999999999999999999
Q ss_pred CCCCCCCCcccHHHHHhhhC
Q 046701 168 LSGKPLTGKIQRRIVAELRK 187 (187)
Q Consensus 168 lP~~t~~GKi~r~~l~~~~~ 187 (187)
|| +|++|||+|+.|++++.
T Consensus 516 lP-~t~~GKi~R~~L~~~~~ 534 (536)
T 3ni2_A 516 IP-KAPSGKILRKNLKEKLA 534 (536)
T ss_dssp CC-BCTTSCBCHHHHHTC--
T ss_pred CC-CCCCCCeeHHHHHHHhc
Confidence 99 99999999999999763
No 4
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=6.7e-35 Score=247.98 Aligned_cols=182 Identities=20% Similarity=0.340 Sum_probs=153.8
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeeccCC--CC-CCCCCCCccccc
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFVLLP--KN-GPHKASSVGKPV 70 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~~~~--~~-~~~~~~~~G~~~ 70 (187)
++|.++..+.+ ....++++||.+++||+++++++. +++.+++.||+++...... .. ......++|+|+
T Consensus 278 ~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~ 357 (539)
T 1mdb_A 278 LVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPM 357 (539)
T ss_dssp ECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEES
T ss_pred ccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCCCcccccCCCCcHHhcCCCCCccc
Confidence 34555554432 245678999999999999999887 6899999999954322111 10 112346899999
Q ss_pred -ce-eEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE-----------
Q 046701 71 -RR-EMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM----------- 134 (187)
Q Consensus 71 -~~-~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~----------- 134 (187)
+. +++|+|++|+++++|++|||+|+ |++++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 358 ~~~~~~~i~d~~~~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~ 436 (539)
T 1mdb_A 358 SPYDESRVWDDHDRDVKPGETGHLLTR-GPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRG 436 (539)
T ss_dssp STTCEEEEECTTSCBCCTTCCEEEEEE-CTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECS
T ss_pred CCCceEEEECCCCCCCcCCCcceEEee-CcccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEEC
Confidence 54 89999999999999999999999 99999 9999999999885 89999999999999999999
Q ss_pred -EEeCcccHHHH----------------------------------------HHHHHhc-CcCCCCccEEEEecCCCCCC
Q 046701 135 -WKISPTEVDAV----------------------------------------KEFCKRN-VASFKVPKKVFIADSLSGKP 172 (187)
Q Consensus 135 -~~i~~~eiE~~----------------------------------------~~~~~~~-l~~~~~P~~i~~v~~lP~~t 172 (187)
++|+|.|||++ +++++++ |+.|++|+.|+++++|| +|
T Consensus 437 G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~l~~~l~~~~L~~~~~P~~i~~v~~lP-~t 515 (539)
T 1mdb_A 437 GEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVESFP-QT 515 (539)
T ss_dssp SCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHHHHHHTTCCGGGSCSEEEECSSCC-BC
T ss_pred CEEECHHHHHHHHHhCCCcceEEEEeccccccCceEEEEEEECCCCCCHHHHHHHHHhCCCCcccCCCEEEEeccCC-CC
Confidence 89999999998 7788887 99999999999999999 99
Q ss_pred CCCcccHHHHHhhh
Q 046701 173 LTGKIQRRIVAELR 186 (187)
Q Consensus 173 ~~GKi~r~~l~~~~ 186 (187)
++||++|+.|++++
T Consensus 516 ~~GKi~r~~L~~~~ 529 (539)
T 1mdb_A 516 GVGKVSKKALREAI 529 (539)
T ss_dssp TTSCBCHHHHHHHH
T ss_pred CCcCEeHHHHHHHH
Confidence 99999999999875
No 5
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.2e-34 Score=245.33 Aligned_cols=182 Identities=27% Similarity=0.475 Sum_probs=157.4
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce-----eCCeEEceecCceeec----cCCCCCCCCCCCccccc
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE-----FGCFVTSAISVCTVFV----LLPKNGPHKASSVGKPV 70 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~-----~~~~i~~~YG~~~~~~----~~~~~~~~~~~~~G~~~ 70 (187)
.+|.++..+.+ ....++++||.+++||+++++++. .++.+++.||+++++. ..........+++|+|+
T Consensus 264 ~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 343 (517)
T 3r44_A 264 AVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAKNIEVVQGYALTESCGGGTLLLSEDALRKAGSAGRAT 343 (517)
T ss_dssp ECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHTTCEEEEEEECGGGTTCEEEECGGGTTTTTTCCBEEC
T ss_pred eHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhcCCcEEEeecccccccceeecCCccccccCCCCCcCC
Confidence 34555544432 234578999999999999999988 4789999999944321 22222345678999999
Q ss_pred -ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE------------E
Q 046701 71 -RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM------------W 135 (187)
Q Consensus 71 -~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~------------~ 135 (187)
+++++++|++|.+++.| .|||+|+ |+.++ ||++++.+...|.+|||+|||+|++|+||++++ +
T Consensus 344 ~~~~~~i~d~~~~~~~~g-~GEl~v~-g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~ 421 (517)
T 3r44_A 344 MFTDVAVRGDDGVIREHG-EGEVVIK-SDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGE 421 (517)
T ss_dssp TTEEEEEECTTSCEESSE-EEEEEEE-ETTSCSEETTCHHHHHHTEETTEEEEEEEEEECTTSCEEEEECGGGCEEETTE
T ss_pred CCeEEEEECCCCCCCCCC-CeEEEEe-CcchhhhhCCChhhhHhhhcCCCEecceeEEEcCCeeEEEecCCcCEEEECCE
Confidence 99999999999999999 8999999 99999 999999999999999999999999999999999 8
Q ss_pred EeCcccHHHH----------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCCC
Q 046701 136 KISPTEVDAV----------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLTG 175 (187)
Q Consensus 136 ~i~~~eiE~~----------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~G 175 (187)
+|+|.|||++ +++|+++|+.|++|+.|+++++|| +|++|
T Consensus 422 ~v~p~eIE~~l~~~p~V~~~~Vv~~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~G 500 (517)
T 3r44_A 422 NVYPAEIESVIIGVPGVSEVAVIGLPDEKWGEIAAAIVVADQNEVSEQQIVEYCGTRLARYKLPKKVIFAEAIP-RNPTG 500 (517)
T ss_dssp EECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTTCCHHHHHHHHHHHSCGGGSCSEEEECSCCC-BCTTC
T ss_pred EECHHHHHHHHHhCCCEeEEEEEeccccccCceEEEEEECCCCCCCHHHHHHHHHHhCCCCCCCCEEEEECCCC-CCCCc
Confidence 9999999998 788999999999999999999999 99999
Q ss_pred cccHHHHHhhhC
Q 046701 176 KIQRRIVAELRK 187 (187)
Q Consensus 176 Ki~r~~l~~~~~ 187 (187)
||+|+.|++.++
T Consensus 501 Ki~R~~L~~~~~ 512 (517)
T 3r44_A 501 KILKTVLREQYS 512 (517)
T ss_dssp CBCHHHHHHHHG
T ss_pred CccHHHHHHHHH
Confidence 999999999873
No 6
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=4.6e-34 Score=240.91 Aligned_cols=182 Identities=20% Similarity=0.297 Sum_probs=154.5
Q ss_pred cccchHhhhhhc-----CCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeeccCCCCCCCCCCCccccc-
Q 046701 3 MNPLSIHGAAQL-----TITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFVLLPKNGPHKASSVGKPV- 70 (187)
Q Consensus 3 ~~~~~~~~~~~~-----~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~~~~~~~~~~~~~~G~~~- 70 (187)
.+|.++..+.+. ...++++||.+++||+++++++. ++..+++.||++++...... .....+++|+|.
T Consensus 250 ~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~-~~~~~~~~g~p~~ 328 (504)
T 1t5h_X 250 ATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAMNSLYM-RQPKTGTEMAPGF 328 (504)
T ss_dssp CCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTTEEEEEE-ESCSSSSEEBCCT
T ss_pred eChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcCcceeeeeccccccccccc-cCCCCCccccCCC
Confidence 456665555331 23468999999999999999887 68899999999543221111 134568899999
Q ss_pred ceeEEEeCCCC---CcCCCCCceeEEEEeC-CCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE----------
Q 046701 71 RREMAIPDENG---VDQKANVNGKMCIREG-PMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM---------- 134 (187)
Q Consensus 71 ~~~v~i~~~~g---~~~~~g~~Gel~v~~~-~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~---------- 134 (187)
+++++++|+++ +++++|+.|||+++ + +.++ ||++++.+...|.+|||+|||+|++|+||++++
T Consensus 329 ~~~~~i~~~~~~~~~~~~~g~~GEl~v~-gg~~~~~GY~~~~~~t~~~f~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~ 407 (504)
T 1t5h_X 329 FSEVRIVRIGGGVDEIVANGEEGELIVA-ASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGTVRILGRVDDMIIS 407 (504)
T ss_dssp TCCEEEECTTSCTTCBCCTTCCEEEEEE-CCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSCEEEEEEGGGCEEE
T ss_pred CCceeEEeccCCCCCcCCCCCcceEEEe-CCceeeceecCCchhhhhhhcCCccccCcEEEECCCceEEEeCcccCEEEE
Confidence 99999999777 89999999999997 5 5666 999999999999999999999999999999999
Q ss_pred --EEeCcccHHHH-----------------------------------------HHHHHh-cCcCCCCccEEEEecCCCC
Q 046701 135 --WKISPTEVDAV-----------------------------------------KEFCKR-NVASFKVPKKVFIADSLSG 170 (187)
Q Consensus 135 --~~i~~~eiE~~-----------------------------------------~~~~~~-~l~~~~~P~~i~~v~~lP~ 170 (187)
++|+|.|||++ .++|++ +|+.|++|+.|+++++||
T Consensus 408 ~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~L~~~~~P~~i~~v~~lP- 486 (504)
T 1t5h_X 408 GGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLP- 486 (504)
T ss_dssp TTEEECHHHHHHHHTTSTTEEEEEEEEEECSSSSEEEEEEEEECTTCCCCHHHHHHHHHTSSCCGGGSCSEEEECSCCC-
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEEeecCCCCcEEEEEEEecCCcCcCHHHHHHHHhhccCcccccceEEEEhhhCC-
Confidence 89999999998 678888 899999999999999999
Q ss_pred CCCCCcccHHHHHhhhC
Q 046701 171 KPLTGKIQRRIVAELRK 187 (187)
Q Consensus 171 ~t~~GKi~r~~l~~~~~ 187 (187)
+|++|||+|+.|++.++
T Consensus 487 ~t~~GKi~r~~L~~~~~ 503 (504)
T 1t5h_X 487 KNALNKVLRRQLVQQVS 503 (504)
T ss_dssp BCTTSCBCHHHHHHHHC
T ss_pred CCCCCCEeHHHHHHHhc
Confidence 99999999999999874
No 7
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=6.4e-34 Score=242.44 Aligned_cols=182 Identities=25% Similarity=0.449 Sum_probs=155.9
Q ss_pred cccchHhhhhhc---CCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeec--cCCCCCCCCCCCccccc
Q 046701 3 MNPLSIHGAAQL---TITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFV--LLPKNGPHKASSVGKPV 70 (187)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~ 70 (187)
.+|.++..+.+. ...++++||.+++||+++++++. + ++.+++.||+++++. ..........+++|+|+
T Consensus 289 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~~~ 368 (548)
T 2d1s_A 289 LVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPEGDDKPGASGKVV 368 (548)
T ss_dssp ECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTTCCCTTCCBEEC
T ss_pred ecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHHHHHHHcCCCceeeccccccccceeeecCcccCCCCCCCccC
Confidence 456666655432 23468999999999999999887 5 678999999944321 11122235678999999
Q ss_pred -ceeEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE-----------
Q 046701 71 -RREMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM----------- 134 (187)
Q Consensus 71 -~~~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~----------- 134 (187)
+++++|+| ++|+++++|+.|||+++ |++++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 369 ~~~~~~i~d~~~~~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~ 447 (548)
T 2d1s_A 369 PLFKAKVIDLDTKKSLGPNRRGEVCVK-GPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYK 447 (548)
T ss_dssp TTCEEEEECTTTCCBCCTTCCEEEEEE-STTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBT
T ss_pred CCceEEEEeCCcCccCCCCCCeEEEEC-CHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEeccccceEEEC
Confidence 99999999 78999999999999999 99999 9999999998884 79999999999999999999
Q ss_pred -EEeCcccHHHH-----------------------------------------HHHHHhcCcCCCCcc-EEEEecCCCCC
Q 046701 135 -WKISPTEVDAV-----------------------------------------KEFCKRNVASFKVPK-KVFIADSLSGK 171 (187)
Q Consensus 135 -~~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~-~i~~v~~lP~~ 171 (187)
++|+|.|||++ +++|+++|+.|++|+ .|+++++|| +
T Consensus 448 G~~v~p~eIE~~l~~~p~V~~a~V~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~~i~~v~~lP-~ 526 (548)
T 2d1s_A 448 GYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVLESGKNMTEKEVMDYVASQVSNAKRLRGGVRFVDEVP-K 526 (548)
T ss_dssp TCCBCHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHTTSCGGGSCTTCEEECSSCC-B
T ss_pred CEEECHHHHHHHHHhCCCccEEEEEEEEcCCCCeeeEEEEEEcCCCCCCHHHHHHHHHHhccccccccccEEEccCCC-C
Confidence 89999999998 678899999999999 999999999 9
Q ss_pred CCCCcccHHHHHhhh
Q 046701 172 PLTGKIQRRIVAELR 186 (187)
Q Consensus 172 t~~GKi~r~~l~~~~ 186 (187)
|++||++|+.|++++
T Consensus 527 t~~GKi~r~~L~~~~ 541 (548)
T 2d1s_A 527 GLTGKIDGRAIREIL 541 (548)
T ss_dssp CTTSCBCHHHHHHHH
T ss_pred CCcchhHHHHHHHHH
Confidence 999999999999876
No 8
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=4.1e-34 Score=247.01 Aligned_cols=182 Identities=13% Similarity=0.188 Sum_probs=151.2
Q ss_pred cccchHhhhhhcCCCCCCceeEEEEecCCCCCCce-------eCCeEEceecCceeecc------CCCCCCCCCCCcccc
Q 046701 3 MNPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE-------FGCFVTSAISVCTVFVL------LPKNGPHKASSVGKP 69 (187)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~-------~~~~i~~~YG~~~~~~~------~~~~~~~~~~~~G~~ 69 (187)
++|.++..+.+....++++||.+++||+++++++. .++.+++.||++++... ..........++|+|
T Consensus 259 ~~Ps~~~~l~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p 338 (620)
T 4dg8_A 259 LTASLFNTLVDLDPDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEEDDIPIGKA 338 (620)
T ss_dssp EEHHHHHHHHHHCGGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGGGSSSCCCBEE
T ss_pred ccHHHHHHHHhcChhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccccCCCCCCceec
Confidence 45666666555455678999999999999997666 37899999999443221 111223456789999
Q ss_pred c-ceeEEEeCCCCCc-CCCCCceeEEEEeCCCee--eecChhhhhhcccc--------CeeeeCceEEEeCCCeEEE---
Q 046701 70 V-RREMAIPDENGVD-QKANVNGKMCIREGPMVQ--RINNPEANKTAFQF--------GWFLSGDLGYFDSQRCLNM--- 134 (187)
Q Consensus 70 ~-~~~v~i~~~~g~~-~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~--------g~~~TgD~~~~d~~g~l~~--- 134 (187)
+ +++++|+|+++.+ ++.|++|||+|+ |++++ ||++++.+...|.+ +||+|||+|++|+||++++
T Consensus 339 ~~~~~~~i~d~~~~~~~~~g~~GEl~i~-G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR 417 (620)
T 4dg8_A 339 IAGTAVLLLDEHGQEIAEPDRAGEIVAF-GAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGR 417 (620)
T ss_dssp CTTEEEEEECTTSCBCCSSSCCEEEEEE-ETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEEC
T ss_pred ccCcEEEEECccCCCCCCCCCceEEEEe-ccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEcc
Confidence 9 9999999988877 789999999999 99999 99999999988853 7999999999999999999
Q ss_pred ---------EEeCcccHHHH----------------------------------HHHHHhcCcCCCCccEEEEecCCCCC
Q 046701 135 ---------WKISPTEVDAV----------------------------------KEFCKRNVASFKVPKKVFIADSLSGK 171 (187)
Q Consensus 135 ---------~~i~~~eiE~~----------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~ 171 (187)
++|+|.|||++ .++++++|+.|++|+.++++++|| +
T Consensus 418 ~dd~Ik~~G~ri~~~eIE~~l~~~p~V~~a~Vv~~~~~~~~~lv~~~~~~~~~~~~~l~~~Lp~y~~P~~~~~v~~lP-~ 496 (620)
T 4dg8_A 418 GDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRERNGVKQLLCAWTGKADASPQALLRQLPTWQRPHACVRVEALP-L 496 (620)
T ss_dssp SSSEEEETTEEEEHHHHHHHHHTSTTEEEEEEEEEEETTEEEEEEEEEECTTCCCHHHHHHSCGGGSCSEEEECSSCC-C
T ss_pred CCCEEEECCEEcCHHHHHHHHHhCCCccEEEEEEEeCCCceEEEEEEecChHHHHHHHHHhChhhcCCcEEEEECcCC-C
Confidence 89999999998 678899999999999999999999 9
Q ss_pred CCCCcccHHHHHhhh
Q 046701 172 PLTGKIQRRIVAELR 186 (187)
Q Consensus 172 t~~GKi~r~~l~~~~ 186 (187)
|++||++|+.|++.+
T Consensus 497 t~~GKidR~~L~~~~ 511 (620)
T 4dg8_A 497 TAHGKLDRAALLRRL 511 (620)
T ss_dssp C----CCHHHHHHHT
T ss_pred CcccCHhHHHHhhcc
Confidence 999999999998865
No 9
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.4e-33 Score=241.39 Aligned_cols=183 Identities=21% Similarity=0.285 Sum_probs=154.4
Q ss_pred cccchHhhhhhc--CCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeec--cCCCCCCCCCCCccccc-c
Q 046701 3 MNPLSIHGAAQL--TITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFV--LLPKNGPHKASSVGKPV-R 71 (187)
Q Consensus 3 ~~~~~~~~~~~~--~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~-~ 71 (187)
.+|.++..+.+. ...++++||.+++||+++++++. +++.+++.||+++++. ..........+++|+|+ +
T Consensus 303 ~~P~~~~~l~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~ 382 (570)
T 3c5e_A 303 GAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMVSKTMKIKPGYMGTAASC 382 (570)
T ss_dssp ECHHHHHHHHTSCTTTCCCTTCCEEEEESSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCTTSCCCTTCCCEECTT
T ss_pred ccHHHHHHHHhccccccccccceEEEEcCCcCCHHHHHHHHHHhCCchhhccchhhcccceecCcccccCCCcccccCCC
Confidence 355666555432 23468999999999999999887 6889999999944321 11122234678999999 9
Q ss_pred eeEEEeCCCCCcCCCCCceeEEEEe----CCCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE-----------
Q 046701 72 REMAIPDENGVDQKANVNGKMCIRE----GPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM----------- 134 (187)
Q Consensus 72 ~~v~i~~~~g~~~~~g~~Gel~v~~----~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~----------- 134 (187)
++++|+|++|+++++|+.|||+++. |++++ ||++++.+...|.+|||+|||+|++|+||++++
T Consensus 383 ~~v~i~d~~g~~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~ 462 (570)
T 3c5e_A 383 YDVQIIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRADDIINSS 462 (570)
T ss_dssp CCEEEECTTSCBCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEEECTTSCEEEEEEGGGCEEET
T ss_pred ceEEEECCCCCCCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEEEcCCceEEEEecCCCEEEEC
Confidence 9999999999999999999999961 45666 999999999999999999999999999999999
Q ss_pred -EEeCcccHHHH----------------------------------------------HHHHHhcCcCCCCccEEEEecC
Q 046701 135 -WKISPTEVDAV----------------------------------------------KEFCKRNVASFKVPKKVFIADS 167 (187)
Q Consensus 135 -~~i~~~eiE~~----------------------------------------------~~~~~~~l~~~~~P~~i~~v~~ 167 (187)
++|+|.|||++ +++|+++|+.|++|+.|+++++
T Consensus 463 G~~V~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~ 542 (570)
T 3c5e_A 463 GYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLN 542 (570)
T ss_dssp TEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHSCGGGSCSEEEEESC
T ss_pred CEEECHHHHHHHHHhCCCcceEEEEeeeCCCCCeEEEEEEEECCcccCcchHHHHHHHHHHHHhhCccccCCcEEEEecc
Confidence 89999999998 4567788999999999999999
Q ss_pred CCCCCCCCcccHHHHHhhh
Q 046701 168 LSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 168 lP~~t~~GKi~r~~l~~~~ 186 (187)
|| +|++||++|+.|++.+
T Consensus 543 lP-~t~~GKi~R~~L~~~~ 560 (570)
T 3c5e_A 543 LP-KTVTGKIQRAKLRDKE 560 (570)
T ss_dssp CC-BCTTCCBCHHHHHHHH
T ss_pred CC-CCCCcCCcHHHHHHHH
Confidence 99 9999999999999875
No 10
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=1.2e-33 Score=245.22 Aligned_cols=182 Identities=20% Similarity=0.294 Sum_probs=153.6
Q ss_pred cccchHhhhhh-----cCCCCCCceeEEEEecCCCCCCce------eC---CeEEceecCceeecc---C-CCCCCCCCC
Q 046701 3 MNPLSIHGAAQ-----LTITPYTNVFLFYKGRVYLPPRLE------FG---CFVTSAISVCTVFVL---L-PKNGPHKAS 64 (187)
Q Consensus 3 ~~~~~~~~~~~-----~~~~~~~~lr~i~~~G~~l~~~~~------~~---~~i~~~YG~~~~~~~---~-~~~~~~~~~ 64 (187)
.+|.++..+.+ ....++++||.+++||+++++++. +| +++++.||+++++.. . ......+.+
T Consensus 356 ~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~ 435 (652)
T 1pg4_A 356 TAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAG 435 (652)
T ss_dssp ECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTT
T ss_pred eCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCCcCccCC
Confidence 34555555433 234578999999999999999987 56 889999999543321 1 112234678
Q ss_pred Cccccc-ceeEEEeCCCCCcCCCCCceeEEEEeC--CCee--eecChhhhhhcc---ccCeeeeCceEEEeCCCeEEE--
Q 046701 65 SVGKPV-RREMAIPDENGVDQKANVNGKMCIREG--PMVQ--RINNPEANKTAF---QFGWFLSGDLGYFDSQRCLNM-- 134 (187)
Q Consensus 65 ~~G~~~-~~~v~i~~~~g~~~~~g~~Gel~v~~~--~~~~--y~~~~~~~~~~~---~~g~~~TgD~~~~d~~g~l~~-- 134 (187)
++|+|+ +++++|+|++|++++.|+.|||+|+ + |+++ ||++++.+...+ .+|||+|||+|++|+||++++
T Consensus 436 s~G~p~~g~~v~i~d~~g~~v~~g~~GEl~i~-g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~G 514 (652)
T 1pg4_A 436 SATRPFFGVQPALVDNEGHPQEGATEGNLVIT-DSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITG 514 (652)
T ss_dssp CCBSBCTTCCEEEECTTCCBCCSSEEEEEEEC-SCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEE
T ss_pred ccccCcCCCeEEEECCCCCCcCCCceEEEEEc-cCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEe
Confidence 999999 9999999999999999999999999 9 5677 999999887765 269999999999999999999
Q ss_pred ----------EEeCcccHHHH--------------------------------------------HHHHHhcCcCCCCcc
Q 046701 135 ----------WKISPTEVDAV--------------------------------------------KEFCKRNVASFKVPK 160 (187)
Q Consensus 135 ----------~~i~~~eiE~~--------------------------------------------~~~~~~~l~~~~~P~ 160 (187)
++|+|.|||++ +++|+++|++|++|+
T Consensus 515 R~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea~Vvg~~~~~~g~~l~a~Vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~ 594 (652)
T 1pg4_A 515 RVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPD 594 (652)
T ss_dssp ESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCS
T ss_pred cCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEEEEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCe
Confidence 89999999998 667888999999999
Q ss_pred EEEEecCCCCCCCCCcccHHHHHhhh
Q 046701 161 KVFIADSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 161 ~i~~v~~lP~~t~~GKi~r~~l~~~~ 186 (187)
.|+++++|| +|++|||+|+.|++++
T Consensus 595 ~i~~v~~lP-~T~sGKi~R~~L~~~~ 619 (652)
T 1pg4_A 595 VLHWTDSLP-KTRSGKIMRRILRKIA 619 (652)
T ss_dssp EEEECSCCC-BCTTSCBCHHHHHHHH
T ss_pred EEEEcCCCC-CCCCccchHHHHHHHH
Confidence 999999999 9999999999999875
No 11
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=2.1e-34 Score=246.36 Aligned_cols=181 Identities=14% Similarity=0.222 Sum_probs=107.2
Q ss_pred cccchHhhhhhcCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeecc------CCCCCCCCCCCcccc
Q 046701 3 MNPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFVL------LPKNGPHKASSVGKP 69 (187)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~~------~~~~~~~~~~~~G~~ 69 (187)
.+|.++..+.+....++++||.+++||+++++.+. + ++.+++.||+++++.. ..........++|+|
T Consensus 309 ~~P~~~~~l~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p 388 (570)
T 4gr5_A 309 LSASLFNFLVDEVPEAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGDLSGTALPIGVP 388 (570)
T ss_dssp EEHHHHHHHHHHCGGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGGTTSSSCCCBEE
T ss_pred ecHHHHHHHHhhchhhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccccCCCcccccee
Confidence 45666666655445578999999999999997766 3 7899999999443221 111123345679999
Q ss_pred c-ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-c--------CeeeeCceEEEeCCCeEEE---
Q 046701 70 V-RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-F--------GWFLSGDLGYFDSQRCLNM--- 134 (187)
Q Consensus 70 ~-~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~--------g~~~TgD~~~~d~~g~l~~--- 134 (187)
+ +++++|+|+++.++++|++|||+|+ |++++ ||++++.+...|. + |||+|||+|++|+||++++
T Consensus 389 ~~~~~v~i~d~~~~~~~~G~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR 467 (570)
T 4gr5_A 389 LAGKRAYVLDDDLKPAANGALGELYVA-GAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGR 467 (570)
T ss_dssp CTTEEEEEECTTSCBCCTTCEEEEEEE-ETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC
T ss_pred eCCCEEEEECCCCCCCCCCCcEEEEEe-ecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcc
Confidence 9 9999999999999999999999999 99999 9999999988874 2 6999999999999999999
Q ss_pred ---------EEeCcccHHHH------------------------------------------HHHHHhcCcCCCCccEEE
Q 046701 135 ---------WKISPTEVDAV------------------------------------------KEFCKRNVASFKVPKKVF 163 (187)
Q Consensus 135 ---------~~i~~~eiE~~------------------------------------------~~~~~~~l~~~~~P~~i~ 163 (187)
+||+|.|||++ +++|+++|+.|++|+.++
T Consensus 468 ~~d~Ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~ 547 (570)
T 4gr5_A 468 ADDQVKIRGFRVEPGEVEARLVGHPAVRQAAVLAQDSRLGDKQLVAYVVAERADAPPDAAELRRHVAEALPAYMVPVECV 547 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCEEEECcEEeCHHHHHHHHhcCCCcceEEEEEeeCCCCCeEEEEEEEecCCCCCcCHHHHHHHHHhhCccccCCcEEE
Confidence 89999999998 667888899999999999
Q ss_pred EecCCCCCCCCCcccHHHHHhh
Q 046701 164 IADSLSGKPLTGKIQRRIVAEL 185 (187)
Q Consensus 164 ~v~~lP~~t~~GKi~r~~l~~~ 185 (187)
++++|| +|++|||+|++|++.
T Consensus 548 ~v~~lP-~t~~GKi~R~~L~~~ 568 (570)
T 4gr5_A 548 PVDELP-RTPNGKLDRRALTGS 568 (570)
T ss_dssp ----------------------
T ss_pred EcccCC-CCCCcCcchHhhhcc
Confidence 999999 999999999999875
No 12
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=2.4e-34 Score=244.94 Aligned_cols=168 Identities=22% Similarity=0.434 Sum_probs=125.3
Q ss_pred CCCCceeEEEEecCCCCCCce----------eC---CeEEceecCceee---ccCCCCCCCCCCCccccc-ceeEEEeC-
Q 046701 17 TPYTNVFLFYKGRVYLPPRLE----------FG---CFVTSAISVCTVF---VLLPKNGPHKASSVGKPV-RREMAIPD- 78 (187)
Q Consensus 17 ~~~~~lr~i~~~G~~l~~~~~----------~~---~~i~~~YG~~~~~---~~~~~~~~~~~~~~G~~~-~~~v~i~~- 78 (187)
.++++||.+++||+++++++. ++ +.+++.||+++++ ............++|+|+ +++++|+|
T Consensus 293 ~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 372 (549)
T 3g7s_A 293 YDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMSDIELKVISL 372 (549)
T ss_dssp CCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECTTCEEEEECS
T ss_pred CCccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCccccCcCCCccccCCCCEEEEEeC
Confidence 578999999999999999887 35 7899999994432 222222224578999999 99999999
Q ss_pred CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhcc---ccC--eeeeCceEEEeCCCeEEE------------EEeCc
Q 046701 79 ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAF---QFG--WFLSGDLGYFDSQRCLNM------------WKISP 139 (187)
Q Consensus 79 ~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~---~~g--~~~TgD~~~~d~~g~l~~------------~~i~~ 139 (187)
++|.+++.|+.|||+|+ |++++ ||++++.+...| .+| ||+|||+|++|+||++++ ++|+|
T Consensus 373 ~~g~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p 451 (549)
T 3g7s_A 373 EDGRELGVGESGEIVIR-GPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAP 451 (549)
T ss_dssp SSCCEECTTCCEEEEEE-STTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------C
T ss_pred CCCcCCCCCCceEEEEE-CcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECH
Confidence 89999999999999999 99999 999999999888 567 999999999999999999 89999
Q ss_pred ccHHHH-------------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCCCc
Q 046701 140 TEVDAV-------------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLTGK 176 (187)
Q Consensus 140 ~eiE~~-------------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~GK 176 (187)
.|||++ +++|+++|+.|++|+.|+++++|| +|++||
T Consensus 452 ~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~GK 530 (549)
T 3g7s_A 452 FELEALLMKHEAVMDVAVIGKPDEEAGEVPKAFIVLKPEYRGKVDEEDIIEWVRERISGYKRVREVEFVEELP-RTASGK 530 (549)
T ss_dssp HHHHHHHTTSTTEEEEEEECCCC------CEEEEEECSTTTTSCCHHHHHHHHHTTCC-----CCCCEEEECC-------
T ss_pred HHHHHHHHhCCCeeeEEEEeeEccccCceEEEEEEECCCccCcCCHHHHHHHHHHhccCcccceEEEEeccCC-CCCCcC
Confidence 999998 778999999999999999999999 999999
Q ss_pred ccHHHHHhhh
Q 046701 177 IQRRIVAELR 186 (187)
Q Consensus 177 i~r~~l~~~~ 186 (187)
|+|+.|++.+
T Consensus 531 i~R~~L~~~~ 540 (549)
T 3g7s_A 531 LLRRLLREKE 540 (549)
T ss_dssp ----------
T ss_pred EeHHHHHHHh
Confidence 9999999875
No 13
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=2e-33 Score=238.18 Aligned_cols=181 Identities=28% Similarity=0.396 Sum_probs=151.1
Q ss_pred cccchHhhhhhcCC---CCCCceeEEEEecCCCCCCce------eCCeEEceecCceeec--cCCCCCCCCCCCccccc-
Q 046701 3 MNPLSIHGAAQLTI---TPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFV--LLPKNGPHKASSVGKPV- 70 (187)
Q Consensus 3 ~~~~~~~~~~~~~~---~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~- 70 (187)
.+|.++..+..... ....+||.+++||+++++++. +++.+++.||+++++. ..........+++|+|+
T Consensus 280 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~ 359 (529)
T 2v7b_A 280 GVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLHIFLSNRAGAVEYGTTGRPVP 359 (529)
T ss_dssp ECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHHSCCEEEEEECTTTSSEEEECCTTCCCTTSCCEECT
T ss_pred ecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHhCCceeeeEchhhcCceeeccccCCCccCCcccCCC
Confidence 35555555443211 113489999999999999887 6899999999944321 11111224668999999
Q ss_pred ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE------------EE
Q 046701 71 RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM------------WK 136 (187)
Q Consensus 71 ~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~------------~~ 136 (187)
+++++|+|++|+++++|++|||+|+ |+.++ ||++++.+...|.+|||+|||+|++|++|++++ ++
T Consensus 360 ~~~~~i~d~~g~~~~~g~~GEl~v~-g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~ 438 (529)
T 2v7b_A 360 GYEIELRDEAGHAVPDGEVGDLYIK-GPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQY 438 (529)
T ss_dssp TCEEEEECTTSCBCCTTSCEEEEEE-CTTCCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSCEEEEEEGGGCBC----C
T ss_pred CCEEEEECCCCCCCCCCCccEEEEe-cCCcccccCCChHHHHHhhhcCCcccCceEEECCCccEEEeCccCCeEEECCEE
Confidence 9999999999999999999999999 99999 999999999999999999999999999999999 88
Q ss_pred eCcccHHHH-------------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCC
Q 046701 137 ISPTEVDAV-------------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPL 173 (187)
Q Consensus 137 i~~~eiE~~-------------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~ 173 (187)
|+|.|||++ +++|+++|+.|++|+.|+++++|| +|+
T Consensus 439 v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~ 517 (529)
T 2v7b_A 439 VSPVEVEMVLVQHDAVLEAAVVGVDHGGLVKTRAFVVLKREFAPSEILAEELKAFVKDRLAPHKYPRDIVFVDDLP-KTA 517 (529)
T ss_dssp BCHHHHHHHHTTSTTEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHTTSCTTTSCSEEEEESCCC-BCT
T ss_pred ECHHHHHHHHHhCCCcceEEEEEecCCCceEEEEEEEecCCCCcchhHHHHHHHHHHhhcchhhCCeEEEEeccCC-CCC
Confidence 999999998 567788899999999999999999 999
Q ss_pred CCcccHHHHHhh
Q 046701 174 TGKIQRRIVAEL 185 (187)
Q Consensus 174 ~GKi~r~~l~~~ 185 (187)
+||++|+.|+++
T Consensus 518 ~GKi~r~~L~~~ 529 (529)
T 2v7b_A 518 TGKIQRFKLREQ 529 (529)
T ss_dssp TSCBCHHHHHC-
T ss_pred ccchhHHhHhhC
Confidence 999999999873
No 14
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.1e-33 Score=241.75 Aligned_cols=177 Identities=18% Similarity=0.291 Sum_probs=150.4
Q ss_pred ccchHhhhhhcCCCCCCceeEEEEecCCCCCCce--e--CCeEEceecCceeec-----cCCCCCCCCCCCccccc-cee
Q 046701 4 NPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE--F--GCFVTSAISVCTVFV-----LLPKNGPHKASSVGKPV-RRE 73 (187)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~--~--~~~i~~~YG~~~~~~-----~~~~~~~~~~~~~G~~~-~~~ 73 (187)
+|.++..+. ...+++||.+++||+++++++. | .+.+++.||+++++. ...........++|+|+ +++
T Consensus 280 ~P~~~~~l~---~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 356 (563)
T 1amu_A 280 PPTYVVHLD---PERILSIQTLITAGSATSPSLVNKWKEKVTYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQ 356 (563)
T ss_dssp CHHHHTTSC---TTTCCSCSEEEEESSCCCHHHHHHHTTTSEEEEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEE
T ss_pred CHHHHHHHH---hcccccccEEEEEEecCCHHHHHHHHhCCeEEEEECcCHHhHhheeeecccccCCCCCcccceeCCCE
Confidence 444444432 3467899999999999999988 3 578999999944321 11111223567899999 999
Q ss_pred EEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhcccc-------CeeeeCceEEEeCCCeEEE----------
Q 046701 74 MAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQF-------GWFLSGDLGYFDSQRCLNM---------- 134 (187)
Q Consensus 74 v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~-------g~~~TgD~~~~d~~g~l~~---------- 134 (187)
++|+|++|.+++.|++|||+++ |++++ ||++++.+...|.+ +||+|||+|++|+||++++
T Consensus 357 v~i~d~~~~~~~~g~~GEl~v~-g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~ 435 (563)
T 1amu_A 357 IYIVDENLQLKSVGEAGELCIG-GEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKI 435 (563)
T ss_dssp EEEECTTSCBCCTTCEEEEEEE-ETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEE
T ss_pred EEEECCCcCCCCCCCcEEEEEe-chhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcCCCeEEEeccccCEEEE
Confidence 9999999999999999999999 99999 99999999888742 4999999999999999999
Q ss_pred --EEeCcccHHHH---------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCC
Q 046701 135 --WKISPTEVDAV---------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPL 173 (187)
Q Consensus 135 --~~i~~~eiE~~---------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~ 173 (187)
++|+|.|||++ +++|+++|+.|++|+.|+++++|| +|+
T Consensus 436 ~G~~V~p~eIE~~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~l~~~l~~~L~~y~~P~~i~~v~~lP-~t~ 514 (563)
T 1amu_A 436 RGHRVELEEVESILLKHMYISETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYFIQLDKMP-LTS 514 (563)
T ss_dssp TTEEEEHHHHHHHHTTSTTEEEEEEEEEECTTSCEEEEEEEEESSCCCHHHHHHHHHHHSCGGGSCSEEEECSSCC-BCT
T ss_pred CCEEeCHHHHHHHHHhCCCcceEEEEEeecCCCCeEEEEEEEeCCCCCHHHHHHHHHhhCchhhCCcEEEEecccC-CCC
Confidence 89999999998 778899999999999999999999 999
Q ss_pred CCcccHHHHHhh
Q 046701 174 TGKIQRRIVAEL 185 (187)
Q Consensus 174 ~GKi~r~~l~~~ 185 (187)
+|||+|+.|++.
T Consensus 515 ~GKi~r~~L~~~ 526 (563)
T 1amu_A 515 NGKIDRKQLPEP 526 (563)
T ss_dssp TSSBCGGGSCCC
T ss_pred CcChhHHhcCCc
Confidence 999999999865
No 15
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=1e-34 Score=247.11 Aligned_cols=183 Identities=20% Similarity=0.351 Sum_probs=105.5
Q ss_pred cccchHhhhhhc---CCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeecc---CCCCCCCCCCCccccc
Q 046701 3 MNPLSIHGAAQL---TITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFVL---LPKNGPHKASSVGKPV 70 (187)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~~---~~~~~~~~~~~~G~~~ 70 (187)
.+|.++..+.+. ...++++||.+++||+++++++. +++.+++.||++++... ..........++|+|+
T Consensus 287 ~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~ 366 (544)
T 3o83_A 287 LVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVLNCKLQQVFGMAEGLVNYTRLDDSDEQIFTTQGRPI 366 (544)
T ss_dssp ECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHHCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEES
T ss_pred echHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHhCCcEEeeeccccccceeecCCCchhhccCCCceec
Confidence 345555444322 23357899999999999999887 69999999999443321 1111112346899995
Q ss_pred --ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhcc-ccCeeeeCceEEEeCCCeEEE-----------
Q 046701 71 --RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAF-QFGWFLSGDLGYFDSQRCLNM----------- 134 (187)
Q Consensus 71 --~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~-~~g~~~TgD~~~~d~~g~l~~----------- 134 (187)
+.+++|+|++|.++++|++|||+++ |++++ ||++++.+...| .+|||+|||+|++|+||++++
T Consensus 367 ~~~~~~~i~d~~~~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~ 445 (544)
T 3o83_A 367 SSDDEIKIVDEQYREVPEGEIGMLATR-GPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRG 445 (544)
T ss_dssp CTTCEEEEECTTSCBCCTTCCEEEEEE-CTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSCEEEEEEEC------
T ss_pred CCCcEEEEECCCCCCCCCCCeeEEEEe-cCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeC
Confidence 8899999999999999999999999 99999 999999999998 479999999999999999999
Q ss_pred -EEeCcccHHHH----------------------------------------HHHHHh-cCcCCCCccEEEEecCCCCCC
Q 046701 135 -WKISPTEVDAV----------------------------------------KEFCKR-NVASFKVPKKVFIADSLSGKP 172 (187)
Q Consensus 135 -~~i~~~eiE~~----------------------------------------~~~~~~-~l~~~~~P~~i~~v~~lP~~t 172 (187)
++|+|.|||++ ++++++ +|+.|++|+.|+++++|| +|
T Consensus 446 G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP-~t 524 (544)
T 3o83_A 446 GEKIASEEIEKLILLHPEVMHAALVAIVDEQFGEKSCAFIVSRNPELKAVVLRRHLMELGIAQYKLPDQIKLIESLP-LT 524 (544)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEECHHHHHHHHHhCCCccEEEEEeccCCCCCceEEEEEEeCCCCCCHHHHHHHHHhCCCCcccCCcEEEEeccCC-CC
Confidence 89999999997 456666 699999999999999999 99
Q ss_pred CCCcccHHHHHhhhC
Q 046701 173 LTGKIQRRIVAELRK 187 (187)
Q Consensus 173 ~~GKi~r~~l~~~~~ 187 (187)
++||++|+.|+++++
T Consensus 525 ~~GKi~r~~L~~~~~ 539 (544)
T 3o83_A 525 AVGKVDKKQLRSILN 539 (544)
T ss_dssp ---------------
T ss_pred CCCCCcHHHHHHHHh
Confidence 999999999999863
No 16
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=5.5e-34 Score=241.10 Aligned_cols=171 Identities=23% Similarity=0.329 Sum_probs=146.1
Q ss_pred CCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeeccCC----C---CCCCCCCCccccc-ceeEEEeCC
Q 046701 15 TITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFVLLP----K---NGPHKASSVGKPV-RREMAIPDE 79 (187)
Q Consensus 15 ~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~~~~----~---~~~~~~~~~G~~~-~~~v~i~~~ 79 (187)
...++++||.+++||+++++++. + ++.+++.||+++++.... . .......++|+|+ +++++|+|+
T Consensus 259 ~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~ 338 (521)
T 3l8c_A 259 CQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDE 338 (521)
T ss_dssp STTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECT
T ss_pred ccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEECC
Confidence 34568999999999999998887 4 889999999954332210 0 0123456899999 999999999
Q ss_pred CCCcCCCCCceeEEEEeCCCee--eecChhhhhhcc----ccCeeeeCceEEEeCCCeEEE------------EEeCccc
Q 046701 80 NGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAF----QFGWFLSGDLGYFDSQRCLNM------------WKISPTE 141 (187)
Q Consensus 80 ~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~----~~g~~~TgD~~~~d~~g~l~~------------~~i~~~e 141 (187)
+|.++++|+.|||+++ |++++ ||++++.+...| .+|||+|||+|++|++|++++ ++|+|.|
T Consensus 339 ~g~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~e 417 (521)
T 3l8c_A 339 DGKELSSGEQGEIIVT-GPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELED 417 (521)
T ss_dssp TSCBCCTTCCEEEEEE-STTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHH
T ss_pred CcCCCCCCCceEEEec-ccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHH
Confidence 9999999999999999 99999 999999998887 247999999999999999999 8999999
Q ss_pred HHHH-------------------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCC
Q 046701 142 VDAV-------------------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKP 172 (187)
Q Consensus 142 iE~~-------------------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t 172 (187)
||++ +++|+++|+.|++|+.|+++++|| +|
T Consensus 418 IE~~l~~~p~V~~a~vv~~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP-~t 496 (521)
T 3l8c_A 418 VSQQLNQSPMVASAVAVPRYNKEHKVQNLLAYIVVKDGVKERFDRELELTKAIKASVKDHMMSYMMPSKFLYRDSLP-LT 496 (521)
T ss_dssp HHHHHHTSTTEEEEEEECCCSSSCC---CEEEEEECTTSGGGCSSHHHHHHHHHHHSGGGSCGGGSCSEEEECSSCC-BC
T ss_pred HHHHHHcCCCcceEEEEEeecCCCCceEEEEEEEecCccccccccchhhHHHHHHHHHhhCccccCCeEEEEecccC-CC
Confidence 9998 455677899999999999999999 99
Q ss_pred CCCcccHHHHHhhhC
Q 046701 173 LTGKIQRRIVAELRK 187 (187)
Q Consensus 173 ~~GKi~r~~l~~~~~ 187 (187)
++|||+|+.|++.++
T Consensus 497 ~~GKidr~~L~~~~~ 511 (521)
T 3l8c_A 497 PNGKIDIKTLINEVN 511 (521)
T ss_dssp TTSSBCHHHHHHHTC
T ss_pred CCcCccHHHHhhhhh
Confidence 999999999999864
No 17
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=1.1e-33 Score=238.81 Aligned_cols=165 Identities=25% Similarity=0.429 Sum_probs=129.8
Q ss_pred CCCceeEEEEecCCCCCCce------eCCeEEceecCceee--ccCCCCCCCCCCCccccc-ceeEEEeCCCCCcCCC--
Q 046701 18 PYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVF--VLLPKNGPHKASSVGKPV-RREMAIPDENGVDQKA-- 86 (187)
Q Consensus 18 ~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~--~~~~~~~~~~~~~~G~~~-~~~v~i~~~~g~~~~~-- 86 (187)
.++++|.+++||+++++++. +++.+++.||+++++ ...........+++|+|+ +++++|+|++|.+++.
T Consensus 270 ~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~~~ 349 (505)
T 3nyq_A 270 ALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTSVRADGEPRAGTVGVPLPGVELRLVEEDGTPIAALD 349 (505)
T ss_dssp HHHHCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCTTSCCCTTCCCEECTTCEEEEC-----CCCCCC
T ss_pred ccccceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhcccccccCCCCCCCCCCcccCCCCCEEEEECCCCCCcccCC
Confidence 46789999999999998887 689999999994322 222223345678999999 9999999999998876
Q ss_pred -CCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE-------------EEeCcccHHHH----
Q 046701 87 -NVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM-------------WKISPTEVDAV---- 145 (187)
Q Consensus 87 -g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~-------------~~i~~~eiE~~---- 145 (187)
|++|||+|+ |++++ ||++++.+...|. +|||+|||+|++|+||++++ ++|+|.|||++
T Consensus 350 ~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~~ 428 (505)
T 3nyq_A 350 GESVGEIQVR-GPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEH 428 (505)
T ss_dssp SCCCEEEEEE-STTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHHHHHHHTTS
T ss_pred CCceEEEEEe-cCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHHHHHHHHHC
Confidence 899999999 99999 9999999999985 79999999999999999998 89999999998
Q ss_pred --------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCCCcccHHHHHh
Q 046701 146 --------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLTGKIQRRIVAE 184 (187)
Q Consensus 146 --------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~GKi~r~~l~~ 184 (187)
+++|+++|+.|++|+.|+++++|| +|++|||+|+.|++
T Consensus 429 p~V~~a~Vv~~~~~~~g~~l~a~vv~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~GKi~r~~L~~ 504 (505)
T 3nyq_A 429 PEVREAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAARLAPHKRPRVVRYLDAVP-RNDMGKIMKRALNR 504 (505)
T ss_dssp TTEEEEEEEEEEETTTEEEEEEEEEESSTTSCCCHHHHHHHHHHHTCGGGSCSEEEECSCCC-C-------------
T ss_pred cCccEEEEEeeECCCCCcEEEEEEEECCCCCCCCHHHHHHHHHhhCCCCcCccEEEEECCCC-CCCCcCeeHHhhcc
Confidence 778899999999999999999999 99999999999987
No 18
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=2.1e-33 Score=237.24 Aligned_cols=181 Identities=19% Similarity=0.291 Sum_probs=152.5
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeeccCC-----CC--CCCCCCC
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFVLLP-----KN--GPHKASS 65 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~~~~-----~~--~~~~~~~ 65 (187)
.+|.++..+.. ....++++||.+++||+++++++. | ++.+++.||+++++.... .. ......+
T Consensus 241 ~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~ 320 (512)
T 3fce_A 241 STPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLDQYKSLP 320 (512)
T ss_dssp ECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHHHCSSCC
T ss_pred ecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEeccccccccCCCc
Confidence 34555544332 234568999999999999999888 5 889999999954332110 00 1235678
Q ss_pred ccccc-ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc----cCeeeeCceEEEeCCCeEEE----
Q 046701 66 VGKPV-RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ----FGWFLSGDLGYFDSQRCLNM---- 134 (187)
Q Consensus 66 ~G~~~-~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~----~g~~~TgD~~~~d~~g~l~~---- 134 (187)
+|+|. +++++++|++|.++++|+.|||+++ |++++ ||++++.+...|. +|||+|||+|++ +||++++
T Consensus 321 ~G~~~~~~~~~i~d~~g~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~dG~l~i~GR~ 398 (512)
T 3fce_A 321 VGYCKSDCRLLIMKEDGTIAPDGEKGEIVIV-GPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-ENGLLFYNGRL 398 (512)
T ss_dssp CEEECTTCEEEEECSSSCBCCTTSCEEEEEE-STTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-ETTEEEEEEEG
T ss_pred cccccCCcEEEEECCCCCCCCCCCeEEEEEe-ccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-cCCEEEEeccc
Confidence 99999 9999999999999999999999999 99999 9999999998874 469999999999 6999999
Q ss_pred --------EEeCcccHHHH---------------------------------------------HHHHHhcCcCCCCccE
Q 046701 135 --------WKISPTEVDAV---------------------------------------------KEFCKRNVASFKVPKK 161 (187)
Q Consensus 135 --------~~i~~~eiE~~---------------------------------------------~~~~~~~l~~~~~P~~ 161 (187)
++|+|.|||++ +++|+++|+.|++|+.
T Consensus 399 ~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~ 478 (512)
T 3fce_A 399 DFQIKLHGYRMELEEIEHHLRACSYVEGAVIVPIKKGEKYDYLLAVVVPGEHSFEKEFKLTSAIKKELNERLPNYMIPRK 478 (512)
T ss_dssp GGCEEETTEEECHHHHHHHHHHSTTEEEEEEEEEEETTEEEEEEEEEEECSCCCSSHHHHHHHHHHHHHTTSCGGGSCSE
T ss_pred CCEEEECCEEECHHHHHHHHHhCCCcceEEEEEEecCCCceEEEEEEecCCccccchhhhHHHHHHHHHhhCchhcCCeE
Confidence 89999999998 5678889999999999
Q ss_pred EEEecCCCCCCCCCcccHHHHHhhh
Q 046701 162 VFIADSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 162 i~~v~~lP~~t~~GKi~r~~l~~~~ 186 (187)
++++++|| +|++|||+|+.|++.+
T Consensus 479 ~~~~~~lP-~t~~GKi~R~~L~~~~ 502 (512)
T 3fce_A 479 FMYQSSIP-MTPNGKVDRKKLLSEV 502 (512)
T ss_dssp EEECSCCC-BCTTSSBCHHHHHHHH
T ss_pred EEEecccC-CCCCcChHHHHHHhhh
Confidence 99999999 9999999999999876
No 19
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=4.3e-34 Score=243.83 Aligned_cols=182 Identities=15% Similarity=0.250 Sum_probs=105.3
Q ss_pred cccchHhhhhhcCCCCCCceeEEEEecCCCCCCce------eCCeEEceecCceeec---cCCCCCCCCCCCccccc-ce
Q 046701 3 MNPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFV---LLPKNGPHKASSVGKPV-RR 72 (187)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~---~~~~~~~~~~~~~G~~~-~~ 72 (187)
++|.++..+. ....++++||.+++||+++++++. +++.+++.||+++++. ...........++|+|+ ++
T Consensus 278 ~~P~~l~~~~-~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~ 356 (562)
T 3ite_A 278 IVPSLLDQTG-LVPEDAPHLVYLGVGGEKMTPRTQQIWSSSDRVALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDS 356 (562)
T ss_dssp ECHHHHHHHT-CCGGGSTTCCEEEEESSCCCHHHHHHHTTCSSCEEEEEECCGGGCSCSEEEECCTTSCTTEEEEECTTC
T ss_pred cCHHHHhhcc-cCccccCceEEEEEecCCCCHHHHHHHhhCCCcEEEEeeccchheeeeeeeeecCCCCCccccccCCCC
Confidence 3455554432 234578999999999999999887 5889999999944322 11122234567899999 99
Q ss_pred eEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccC--eeeeCceEEEeCCCeEEE------------E
Q 046701 73 EMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFG--WFLSGDLGYFDSQRCLNM------------W 135 (187)
Q Consensus 73 ~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g--~~~TgD~~~~d~~g~l~~------------~ 135 (187)
+++++| +++.++++|++|||+|+ |+.++ ||++++.+...+.+| ||+|||+|++|+||++++ +
T Consensus 357 ~~~i~d~~~~~~~~~g~~GEl~v~-g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~ 435 (562)
T 3ite_A 357 VAHVLAPGSNEHVKKGMAGELVIE-GSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQ 435 (562)
T ss_dssp EEEEECTTSSCBCCTTSCEEEEEE-STTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECTTSCEEEEEEC---------
T ss_pred eEEEEeCCCCCCCCCCCceEEEEe-ccccchhhCCCccccccccCCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcE
Confidence 999999 46889999999999999 99999 999999887766676 999999999999999999 8
Q ss_pred EeCcccHHHH-------------------------------------------------------HHHHHhcCcCCCCcc
Q 046701 136 KISPTEVDAV-------------------------------------------------------KEFCKRNVASFKVPK 160 (187)
Q Consensus 136 ~i~~~eiE~~-------------------------------------------------------~~~~~~~l~~~~~P~ 160 (187)
||+|.|||++ +++|+++|+.|++|+
T Consensus 436 ~v~p~eIE~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~y~~P~ 515 (562)
T 3ite_A 436 RLELGEVSEVIRSLSPTDIDVVTLLLNHPGTSKQFLVSFVASSGAAVRGELRWINENYKEINNSLRQACEQTLPAYMVPD 515 (562)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECHHHHHHHHHhcCCCceeEEEEEecCCCCcceEEEEEEecccccccccccccccchhhHHHHHHHHHHhhCCcccCCc
Confidence 9999999986 234556789999999
Q ss_pred EEEEecCCCCCC-CCCcccHHHHHhhhC
Q 046701 161 KVFIADSLSGKP-LTGKIQRRIVAELRK 187 (187)
Q Consensus 161 ~i~~v~~lP~~t-~~GKi~r~~l~~~~~ 187 (187)
.|+++++|| +| ++||++|+.|+++++
T Consensus 516 ~i~~v~~lP-~t~~~GKi~r~~L~~~~~ 542 (562)
T 3ite_A 516 FIIPISFIP-LRDTSAKTDAKALEHMFH 542 (562)
T ss_dssp ----------------------------
T ss_pred EEEEeccCC-CCCCCCcchHHHHHHHHh
Confidence 999999999 98 899999999998763
No 20
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=3.8e-34 Score=243.46 Aligned_cols=183 Identities=20% Similarity=0.279 Sum_probs=134.3
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce-----eCCeEEceecCceeec---cCCCC-----C-----CC
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE-----FGCFVTSAISVCTVFV---LLPKN-----G-----PH 61 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~-----~~~~i~~~YG~~~~~~---~~~~~-----~-----~~ 61 (187)
.+|.++..+.+ ....++++||.+++||+++++++. +|+.+++.||+++++. ..... . ..
T Consensus 273 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 352 (541)
T 1v25_A 273 GVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLT 352 (541)
T ss_dssp ECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHHHHTTCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHH
T ss_pred cchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHHHHhCCceeecccccccccceecccccccccccCcccccc
Confidence 34555544432 124578999999999999999887 6899999999944321 11110 0 01
Q ss_pred CCCCccccc-ceeEEEeCCCCCcCCC--CCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE-
Q 046701 62 KASSVGKPV-RREMAIPDENGVDQKA--NVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM- 134 (187)
Q Consensus 62 ~~~~~G~~~-~~~v~i~~~~g~~~~~--g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~- 134 (187)
...++|+|+ +++++|+|++|++++. +++|||+++ |++++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 353 ~~~~~G~p~~~~~~~i~d~~g~~~~~~~~~~GEl~v~-g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~l~~~ 431 (541)
T 1v25_A 353 LKAKTGLPIPLVRLRVADEEGRPVPKDGKALGEVQLK-GPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIK 431 (541)
T ss_dssp HHTSCBEECTTCEEEEECTTSCBCCSSSCCCEEEEEE-STTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEE
T ss_pred ccCCCCCcCCCcEEEEECCCCCCCCCCCCcceEEEEe-CcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCceEEEe
Confidence 347899999 9999999999999985 368999999 99999 9999999999887 89999999999999999999
Q ss_pred -----------EEeCcccHHHH----------------------------------------HHHHHh-cCcCCCCccEE
Q 046701 135 -----------WKISPTEVDAV----------------------------------------KEFCKR-NVASFKVPKKV 162 (187)
Q Consensus 135 -----------~~i~~~eiE~~----------------------------------------~~~~~~-~l~~~~~P~~i 162 (187)
++|+|.|||++ .+++++ +|+.|++|+.|
T Consensus 432 GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~~~~~~L~~~~~P~~i 511 (541)
T 1v25_A 432 DRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQLPDAY 511 (541)
T ss_dssp EESSCEEEETTEEEEHHHHHCC----------CEEEEECSSSSEEEEECC-------------------CCCTTTSCSBC
T ss_pred ecccceeeeCCEEECHHHHHHHHHhCCCceEEEEEEecCCCcCceEEEEEEECCCCCCHHHHHHHHHhccCccccCCcEE
Confidence 89999999997 566777 89999999999
Q ss_pred EEecCCCCCCCCCcccHHHHHhhhC
Q 046701 163 FIADSLSGKPLTGKIQRRIVAELRK 187 (187)
Q Consensus 163 ~~v~~lP~~t~~GKi~r~~l~~~~~ 187 (187)
+++++|| +|++||++|+.|++.++
T Consensus 512 ~~v~~lP-~t~~GKi~r~~L~~~~~ 535 (541)
T 1v25_A 512 VFAEEIP-RTSAGKFLKRALREQYK 535 (541)
T ss_dssp ---------------CCTTHHHHST
T ss_pred EEeCCCC-CCCccCeeHHHHHHHHH
Confidence 9999999 99999999999998763
No 21
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=6.4e-34 Score=242.39 Aligned_cols=182 Identities=26% Similarity=0.479 Sum_probs=107.3
Q ss_pred cccchHhhhhhc---CCCCCCceeEEEEecCCCCCCce------eCCe-EEceecCceeec--cCCCCCCCCCCCccccc
Q 046701 3 MNPLSIHGAAQL---TITPYTNVFLFYKGRVYLPPRLE------FGCF-VTSAISVCTVFV--LLPKNGPHKASSVGKPV 70 (187)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~~lr~i~~~G~~l~~~~~------~~~~-i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~ 70 (187)
.+|.++..+.+. ...++++||.+++||+++++++. ++.. +++.||+++++. ..........+++|+|+
T Consensus 287 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~~~ 366 (550)
T 3rix_A 287 LVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVV 366 (550)
T ss_dssp ECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTTCCCTTEEEEEC
T ss_pred eCcHHHHHHHhCccccccCcccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceecCCCCCCCCCCccccc
Confidence 355555554432 34578999999999999999888 5664 999999943221 11122345678999999
Q ss_pred -ceeEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhcc-ccCeeeeCceEEEeCCCeEEE-----------
Q 046701 71 -RREMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAF-QFGWFLSGDLGYFDSQRCLNM----------- 134 (187)
Q Consensus 71 -~~~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~-~~g~~~TgD~~~~d~~g~l~~----------- 134 (187)
+++++|+| ++|.++++|+.|||+|+ |++++ ||++++.+...| .+|||+|||+|++|+||++++
T Consensus 367 ~~~~~~i~d~~~~~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~ 445 (550)
T 3rix_A 367 PFFEAKVVDLDTGKTLGVNQRGELCVR-GPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYK 445 (550)
T ss_dssp TTCEEEEECTTTCCBCCTTCCEEEEEE-STTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC----------
T ss_pred CCcEEEEEeCCCCcCCCCCCCeEEEEe-CCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEEecchheeEEC
Confidence 99999999 67999999999999999 99999 999999999888 579999999999999999999
Q ss_pred -EEeCcccHHHH-----------------------------------------HHHHHhcCcCCCCcc-EEEEecCCCCC
Q 046701 135 -WKISPTEVDAV-----------------------------------------KEFCKRNVASFKVPK-KVFIADSLSGK 171 (187)
Q Consensus 135 -~~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~-~i~~v~~lP~~ 171 (187)
++|+|.|||++ ++++++++++++.|. .|+++++|| +
T Consensus 446 G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~v~~lP-~ 524 (550)
T 3rix_A 446 GYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVP-K 524 (550)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEECHHHHHHHHHhCCCcceEEEEEeecCCCCceEEEEEEecCCCCCCHHHHHHHHHHhcccccccCCceEEEeecC-C
Confidence 89999999998 567778888886655 799999999 9
Q ss_pred CCCCcccHHHHHhhh
Q 046701 172 PLTGKIQRRIVAELR 186 (187)
Q Consensus 172 t~~GKi~r~~l~~~~ 186 (187)
|++|||+|+.|++++
T Consensus 525 t~~GKi~r~~L~~~~ 539 (550)
T 3rix_A 525 GLTGKLDARKIREIL 539 (550)
T ss_dssp ---------------
T ss_pred CCCcceeHHHHHHHH
Confidence 999999999999876
No 22
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=6.8e-33 Score=234.09 Aligned_cols=181 Identities=19% Similarity=0.293 Sum_probs=151.8
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeeccCC-------CCCCCCCCC
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFVLLP-------KNGPHKASS 65 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~~~~-------~~~~~~~~~ 65 (187)
.+|.++..+.. .....++++|.+++||+++++++. | ++.+++.||+++++.... ........+
T Consensus 240 ~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~ 319 (511)
T 3e7w_A 240 STPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVISRSESLP 319 (511)
T ss_dssp ECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHTTCSSCC
T ss_pred ecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccccCCcCC
Confidence 34555554432 234568999999999999999888 5 889999999944332110 011234568
Q ss_pred ccccc-ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc--cC--eeeeCceEEEeCCCeEEE----
Q 046701 66 VGKPV-RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ--FG--WFLSGDLGYFDSQRCLNM---- 134 (187)
Q Consensus 66 ~G~~~-~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~--~g--~~~TgD~~~~d~~g~l~~---- 134 (187)
+|+|+ +++++|+|++|.++++|++|||+|+ |+.++ ||++++.+...|. +| ||+|||+|+++ ||++++
T Consensus 320 ~G~~~~~~~~~i~d~~g~~~~~g~~GEl~v~-g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~-dG~l~~~GR~ 397 (511)
T 3e7w_A 320 VGFAKPDMNIFIMDEEGQPLPEGEKGEIVIA-GPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQ-DGQIFCQGRL 397 (511)
T ss_dssp CBEECTTCEEEEECTTSCBCCTTCCEEEEEE-STTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEE-TTEEEEEEES
T ss_pred CcceeCCCEEEEECCCCCCCCCCCceEEEEe-cCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEcc-CCeEEEEccc
Confidence 99999 9999999999999999999999999 99999 9999999998883 44 79999999995 899999
Q ss_pred --------EEeCcccHHHH---------------------------------------------HHHHHhcCcCCCCccE
Q 046701 135 --------WKISPTEVDAV---------------------------------------------KEFCKRNVASFKVPKK 161 (187)
Q Consensus 135 --------~~i~~~eiE~~---------------------------------------------~~~~~~~l~~~~~P~~ 161 (187)
++|+|.|||++ +++++++|+.|++|+.
T Consensus 398 ~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~ 477 (511)
T 3e7w_A 398 DFQIKLHGYRMELEEIEFHVRQSQYVRSAVVIPYQPNGTVEYLIAAIVPEEHEFEKEFQLTSAIKKELAASLPAYMIPRK 477 (511)
T ss_dssp SSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEECSSSSCCEEEEEEEECCCCCSSHHHHHHHHHHHHHHHSCGGGSCSE
T ss_pred cCEEEECCEEeCHHHHHHHHHhCCCcceEEEEEEcCCCCceEEEEEEEeccccccchhhHHHHHHHHHHhhCchhhCCee
Confidence 89999999998 5677888999999999
Q ss_pred EEEecCCCCCCCCCcccHHHHHhhh
Q 046701 162 VFIADSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 162 i~~v~~lP~~t~~GKi~r~~l~~~~ 186 (187)
++++++|| +|++|||+|+.|++.+
T Consensus 478 ~~~v~~lP-~t~~GKi~R~~L~~~~ 501 (511)
T 3e7w_A 478 FIYQDHIQ-MTANGKIDRKRIGEEV 501 (511)
T ss_dssp EEECSCCC-BCTTSCBCHHHHHHHH
T ss_pred EEEeccCC-CCCCcCccHHHHHhHH
Confidence 99999999 9999999999999976
No 23
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.98 E-value=9.3e-33 Score=238.21 Aligned_cols=168 Identities=24% Similarity=0.436 Sum_probs=146.9
Q ss_pred CCCCceeEEEEecCCCCCCce------eCCeEEceecCceeeccCC---CCCCCCCCCccccc--ceeEEEeCCCCCcCC
Q 046701 17 TPYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVFVLLP---KNGPHKASSVGKPV--RREMAIPDENGVDQK 85 (187)
Q Consensus 17 ~~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~~~~~---~~~~~~~~~~G~~~--~~~v~i~~~~g~~~~ 85 (187)
.++++||.+++||+++++++. +++.+++.||++++..... ........++|+|+ +.+++|+|++|++++
T Consensus 299 ~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~p 378 (617)
T 3rg2_A 299 AQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLP 378 (617)
T ss_dssp TTTTTCCEEEEESSCCCHHHHHHHHHHTCSEEEEEEEETTEEEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCC
T ss_pred ccCCCccEEEEcCCcCCHHHHHHHHHHhCCcEEEEeccCcceeecccCCCcccccccCCCccCCCCceEEEECCCCCCCC
Confidence 378999999999999999887 6899999999954332211 11111235789997 779999999999999
Q ss_pred CCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE------------EEeCcccHHHH-----
Q 046701 86 ANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM------------WKISPTEVDAV----- 145 (187)
Q Consensus 86 ~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~------------~~i~~~eiE~~----- 145 (187)
.|++|||+|+ |++++ ||++++.+...|. ++||+|||+|++++||++++ ++|+|.|||++
T Consensus 379 ~G~~GEl~i~-G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p 457 (617)
T 3rg2_A 379 QGEVGRLMTR-GPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHP 457 (617)
T ss_dssp TTCCEEEEEE-CSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHHHHTTST
T ss_pred CCCceEEEec-CccccchhcCChhhhhhccCCCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHHHHHhCC
Confidence 9999999999 99999 9999999999995 79999999999999999999 89999999998
Q ss_pred ----------------------------------HHHHHh-cCcCCCCccEEEEecCCCCCCCCCcccHHHHHhhh
Q 046701 146 ----------------------------------KEFCKR-NVASFKVPKKVFIADSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 146 ----------------------------------~~~~~~-~l~~~~~P~~i~~v~~lP~~t~~GKi~r~~l~~~~ 186 (187)
.+++++ .|+.|++|..++++++|| +|++||++|+.|++++
T Consensus 458 ~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~l~~~l~~~~lp~~~vP~~~~~v~~lP-~t~~GKidR~~L~~~~ 532 (617)
T 3rg2_A 458 AVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLP-LTAVGKVDKKQLRQWL 532 (617)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEEEESSCCCHHHHHHHHHTTTCCGGGSCSEEEECSCCC-BCTTSSBCHHHHHHHH
T ss_pred CeeEEEEEeccCcccCeeEEEEEEeCCCCCHHHHHHHHHhCCCccccCCcEEEEecccC-CCCCCCCcHHHHHHHH
Confidence 677777 699999999999999999 9999999999999865
No 24
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.98 E-value=1.5e-32 Score=247.57 Aligned_cols=182 Identities=27% Similarity=0.455 Sum_probs=108.2
Q ss_pred cccchHhhhhh---cCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeec-------cCCCCCCCCCCC
Q 046701 3 MNPLSIHGAAQ---LTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFV-------LLPKNGPHKASS 65 (187)
Q Consensus 3 ~~~~~~~~~~~---~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~-------~~~~~~~~~~~~ 65 (187)
++|.++..+.+ ....++++||.+++||+++++++. | ++.+++.||+++++. ..........++
T Consensus 324 ~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~ 403 (979)
T 3tsy_A 324 MVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGA 403 (979)
T ss_dssp ECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEECGGGSSSCCCCCTTC
T ss_pred cHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHhCCCCCCCccccCCCC
Confidence 34555544432 234578999999999999999988 5 889999999944321 112233456789
Q ss_pred ccccc-ceeEEEeC-CCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-cCeeeeCceEEEeCCCeEEE------
Q 046701 66 VGKPV-RREMAIPD-ENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-FGWFLSGDLGYFDSQRCLNM------ 134 (187)
Q Consensus 66 ~G~~~-~~~v~i~~-~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-~g~~~TgD~~~~d~~g~l~~------ 134 (187)
+|+|+ +++++|+| ++|+++++|++|||+|+ |+.++ ||++++.+...|. +|||+|||+|++|+||++++
T Consensus 404 ~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~-g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd 482 (979)
T 3tsy_A 404 CGTVVRNAEMKIVDPDTGDSLSRNQPGEICIR-GHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKE 482 (979)
T ss_dssp CCEECSSCEEEEECTTSCCBCCTTCCEEEEEE-STTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEESCC
T ss_pred cCcccCCcEEEEEeCCCCCCCCCCCccEEEEE-CCCccccccCChhhhhhhccCCCcEEcCCEEEEcCCceEEEecCCCC
Confidence 99999 99999999 67999999999999999 99999 9999999999884 79999999999999999999
Q ss_pred ------EEeCcccHHHH-----------------------------------------HHHHHhcCcCCCCccEEEEecC
Q 046701 135 ------WKISPTEVDAV-----------------------------------------KEFCKRNVASFKVPKKVFIADS 167 (187)
Q Consensus 135 ------~~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~~i~~v~~ 167 (187)
++|+|.|||++ +++++++|+.|++|+.++++++
T Consensus 483 ~ik~~G~~v~~~eIE~~l~~~p~V~~~~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~ 562 (979)
T 3tsy_A 483 LIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTES 562 (979)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCEEECHHHHHHHHHhCCCcceEEEEEecccCCCcEEEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEEeCC
Confidence 89999999998 6778888999999999999999
Q ss_pred CCCCCCCCcccHHHHHhhh
Q 046701 168 LSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 168 lP~~t~~GKi~r~~l~~~~ 186 (187)
|| +|++|||+|+.|++.+
T Consensus 563 lP-~t~~GKi~r~~L~~~~ 580 (979)
T 3tsy_A 563 IP-KAPSGKILRKDLRAKL 580 (979)
T ss_dssp -------------------
T ss_pred cC-cCCCCCeeHHHHHHHH
Confidence 99 9999999999999876
No 25
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.2e-32 Score=231.85 Aligned_cols=176 Identities=21% Similarity=0.335 Sum_probs=133.3
Q ss_pred cccchHhhhhhcCCCCCCceeEEEEecCCCCCCce-----eCCeEEceecCceeec----cCCCCCCCCCCCccccc-ce
Q 046701 3 MNPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE-----FGCFVTSAISVCTVFV----LLPKNGPHKASSVGKPV-RR 72 (187)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~-----~~~~i~~~YG~~~~~~----~~~~~~~~~~~~~G~~~-~~ 72 (187)
.+|.++..+.+.......+||.+++||+++++++. +++++++.||+++++. ...........++|+|+ ++
T Consensus 257 ~~P~~~~~l~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~ 336 (501)
T 3ipl_A 257 LVPQTLNWLMQQGLHEPYNLQKILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANV 336 (501)
T ss_dssp ECHHHHHHHHHHTCCSCTTCCEEEECSSCCCHHHHHHHHHTTCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCBEECTTC
T ss_pred chHHHHHHHHhcCCCCcCcccEEEEeCCCCCHHHHHHHHHhCCCEeccccccccccceeecCccccccCCCCCCCCCCCc
Confidence 45666666554433344499999999999999887 6899999999944321 11111123567899999 99
Q ss_pred eEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE------------EEeC
Q 046701 73 EMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM------------WKIS 138 (187)
Q Consensus 73 ~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~------------~~i~ 138 (187)
+++++|++ +|+.|||+++ |+.++ ||++++.+.. +.+|||+|||+|++|++|++++ ++|+
T Consensus 337 ~~~i~d~~-----~~~~GEl~v~-g~~~~~gY~~~~~~t~~-~~~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~ 409 (501)
T 3ipl_A 337 DVKIKNPN-----KEGHGELMIK-GANVMNGYLYPTDLTGT-FENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIY 409 (501)
T ss_dssp EEEEESCC-----SSCCEEEEEE-STTSCSCCSBSTTCCCS-EETTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEEC
T ss_pred EEEEecCC-----CCCccEEEEe-ccchhhhhCcChhhcch-hcCCceecCCEEEEcCCCeEEEEccccceEEECCEEEC
Confidence 99999975 5678999999 99999 9999998877 7899999999999999999999 8999
Q ss_pred cccHHHH---------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCCCcccH
Q 046701 139 PTEVDAV---------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLTGKIQR 179 (187)
Q Consensus 139 ~~eiE~~---------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~GKi~r 179 (187)
|.|||++ +++|+++|+.|++|+.|+++++|| +|++|||+|
T Consensus 410 p~eiE~~l~~~p~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~GKi~R 488 (501)
T 3ipl_A 410 PYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKAQLIAYLSKHLAKYKVPKHFEKVDTLP-YTSTGKLQR 488 (501)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSCCCHHHHHHHHHHHSCGGGSCSEEEECSSCC----------
T ss_pred HHHHHHHHHhCCCccEEEEEEEecccCCceEEEEEEeCCCCCHHHHHHHHHhhCccccCCCEEEEecccC-CCCCCCEeH
Confidence 9999998 788999999999999999999999 999999999
Q ss_pred HHHHhhh
Q 046701 180 RIVAELR 186 (187)
Q Consensus 180 ~~l~~~~ 186 (187)
+.|++..
T Consensus 489 ~~l~~~~ 495 (501)
T 3ipl_A 489 NKLYREG 495 (501)
T ss_dssp -------
T ss_pred HHHhhcc
Confidence 9999864
No 26
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.97 E-value=7.3e-32 Score=234.54 Aligned_cols=182 Identities=16% Similarity=0.257 Sum_probs=150.1
Q ss_pred cccchHhhhhhc-----CCCCCCceeEEEEecCCCCCCce------eC---CeEEceecCceeec----cCC-CCCCCCC
Q 046701 3 MNPLSIHGAAQL-----TITPYTNVFLFYKGRVYLPPRLE------FG---CFVTSAISVCTVFV----LLP-KNGPHKA 63 (187)
Q Consensus 3 ~~~~~~~~~~~~-----~~~~~~~lr~i~~~G~~l~~~~~------~~---~~i~~~YG~~~~~~----~~~-~~~~~~~ 63 (187)
.+|.++..+.+. ...++++||.+++||++++++++ +| ++|++.||+++++. ... .....+.
T Consensus 362 ~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~ 441 (663)
T 1ry2_A 362 VAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKP 441 (663)
T ss_dssp ECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCT
T ss_pred ecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCccccCeeeccCCCCCcccCC
Confidence 356666555432 23568999999999999999988 56 88999999944321 111 1234567
Q ss_pred CCccccc-ceeEEEeCC-CCCcCCC-CCceeEEEEeCC--Cee--eecChhhhhhccc---cCeeeeCceEEEeCCCeEE
Q 046701 64 SSVGKPV-RREMAIPDE-NGVDQKA-NVNGKMCIREGP--MVQ--RINNPEANKTAFQ---FGWFLSGDLGYFDSQRCLN 133 (187)
Q Consensus 64 ~~~G~~~-~~~v~i~~~-~g~~~~~-g~~Gel~v~~~~--~~~--y~~~~~~~~~~~~---~g~~~TgD~~~~d~~g~l~ 133 (187)
+++|+|+ +++++|+|+ +|++++. |+.|||+++ ++ +++ ||++++.+.+.|. +|||+|||+|++|+||+++
T Consensus 442 gs~G~p~~g~~v~i~d~~~g~~v~~~g~~Gel~i~-g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~ 520 (663)
T 1ry2_A 442 GSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVK-AAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIW 520 (663)
T ss_dssp TCCCEECTTCCEEEECSSSTTCEECSSCEEEEEES-SCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEE
T ss_pred CccccCcCCCeEEEEcCCCCCcCCCCCcceEEEEe-cCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEE
Confidence 8999999 999999997 8999998 999999999 95 566 9999998877762 6999999999999999999
Q ss_pred E------------EEeCcccHHHH---------------------------------------------------HHHHH
Q 046701 134 M------------WKISPTEVDAV---------------------------------------------------KEFCK 150 (187)
Q Consensus 134 ~------------~~i~~~eiE~~---------------------------------------------------~~~~~ 150 (187)
+ ++|+|.|||++ +++++
T Consensus 521 i~GR~dd~Ik~~G~rI~~~eIE~~l~~~p~V~ea~Vvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~~~~l~~~l~~~l~ 600 (663)
T 1ry2_A 521 ILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTATDDELQDIKKHLVFTVR 600 (663)
T ss_dssp ECSCTTSCBCSSSCCBCHHHHHHHHHSSTTEEEEEEECCCCCTTSCCCEEEEEEC------------CCSHHHHHHHHHH
T ss_pred EEeecCCEEEECCEEcCHHHHHHHHHhCCCcceEEEEEEecCCCCeEEEEEEEEcCCCccccccchhHHHHHHHHHHHHH
Confidence 9 78888888887 12356
Q ss_pred hcCcCCCCccEEEEecCCCCCCCCCcccHHHHHhhh
Q 046701 151 RNVASFKVPKKVFIADSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 151 ~~l~~~~~P~~i~~v~~lP~~t~~GKi~r~~l~~~~ 186 (187)
++|++|++|+.|+++++|| +|++|||+|+.|++++
T Consensus 601 ~~L~~~~~P~~i~~v~~lP-~T~sGKi~R~~L~~~~ 635 (663)
T 1ry2_A 601 KDIGPFAAPKLIILVDDLP-KTRSGKIMRRILRKIL 635 (663)
T ss_dssp HHTCTTTSCSEEEECSCCC-BCTTSCBCHHHHHHSC
T ss_pred HhCCCCcCCeEEEEcCCCC-CCCccCchHHHHHHHH
Confidence 7799999999999999999 9999999999999876
No 27
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.97 E-value=1e-32 Score=232.79 Aligned_cols=177 Identities=23% Similarity=0.339 Sum_probs=101.1
Q ss_pred ccchHhhhhh-cCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceee---ccCCCCCCCCCCCccccc-c
Q 046701 4 NPLSIHGAAQ-LTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVF---VLLPKNGPHKASSVGKPV-R 71 (187)
Q Consensus 4 ~~~~~~~~~~-~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~---~~~~~~~~~~~~~~G~~~-~ 71 (187)
+|.++..+.+ ....++++||.++.+|++ ++. + ++.+++.||+++++ .... ......++|+|+ +
T Consensus 255 ~p~~~~~l~~~~~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~--~~~~~~~~G~p~~~ 329 (509)
T 3ivr_A 255 FAPMLGNILDQAAPAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAP--YRDRPKSAGRPLFW 329 (509)
T ss_dssp ETTHHHHHHHHCCGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEE--GGGSTTSCCEECTT
T ss_pred cHHHHHHHHhcccccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCc--cccCCCcccccCCC
Confidence 4555554433 234567899999999987 333 5 89999999994322 1111 112335599999 9
Q ss_pred eeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccCeeeeCceEEEeCCCeEEE--------------E
Q 046701 72 REMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM--------------W 135 (187)
Q Consensus 72 ~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~--------------~ 135 (187)
++++|+|++|.++++|++|||+|+ |++++ ||++++.+...|.+|||+|||+|++|++|++++ +
T Consensus 330 ~~~~i~d~~~~~~~~g~~GEl~v~-g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~ 408 (509)
T 3ivr_A 330 RTVAVVDAEDRPLPPGEVGEIVLR-GPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGE 408 (509)
T ss_dssp CEEEEECTTSCBCCTTCCEEEEEE-STTSCCEETTCHHHHHHHTGGGSEEEEEEEEECTTSCEEEEEEC-----------
T ss_pred cEEEEECCCCCCCCCCCceEEEEe-cCCccccccCCHHHhHHHhhcCCcccccEEEECCCceEEEeCCCCcceeEEECCE
Confidence 999999999999999999999999 99999 999999999999999999999999999999988 7
Q ss_pred EeCcccHHHH-----------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCC
Q 046701 136 KISPTEVDAV-----------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLT 174 (187)
Q Consensus 136 ~i~~~eiE~~-----------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~ 174 (187)
+|+|.|||++ +++++++|+.|++|+.|+++++|| +|++
T Consensus 409 ~v~p~eiE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~ 487 (509)
T 3ivr_A 409 NVYPAEVEGALKQHPAIADAVVIGVPDPQWSEAIKAVCVCKPGESIAADALAEFVASLIARYKKPKHVVFVEALP-KDAK 487 (509)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECHHHHHHHHHhCCCceeEEEEeccccccCcEEEEEEEeCCCCCCCHHHHHHHHHhhCcccCCCcEEEEecCCC-CCCC
Confidence 8999999998 667888899999999999999999 9999
Q ss_pred CcccHHHHHhhhC
Q 046701 175 GKIQRRIVAELRK 187 (187)
Q Consensus 175 GKi~r~~l~~~~~ 187 (187)
|||+|+.|++.++
T Consensus 488 GKidr~~Lr~~~~ 500 (509)
T 3ivr_A 488 GAIDRAAVKTAHG 500 (509)
T ss_dssp -------------
T ss_pred CCccHHHHHHHHh
Confidence 9999999998763
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.97 E-value=1.7e-31 Score=227.80 Aligned_cols=169 Identities=17% Similarity=0.272 Sum_probs=143.2
Q ss_pred CCCCCCceeEEEEecCCCCCCce------e------CCeEEceecCceeec---cCCCCCC-------------------
Q 046701 15 TITPYTNVFLFYKGRVYLPPRLE------F------GCFVTSAISVCTVFV---LLPKNGP------------------- 60 (187)
Q Consensus 15 ~~~~~~~lr~i~~~G~~l~~~~~------~------~~~i~~~YG~~~~~~---~~~~~~~------------------- 60 (187)
...++++||.+++||+++++++. + +..+++.||+++++. .......
T Consensus 294 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 373 (576)
T 3gqw_A 294 AELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVA 373 (576)
T ss_dssp TTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCC
T ss_pred ccCChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccc
Confidence 45678999999999999999887 3 678999999933221 1110000
Q ss_pred --------CCCCCccccc-ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccccCeeeeCceEEEeCC
Q 046701 61 --------HKASSVGKPV-RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQFGWFLSGDLGYFDSQ 129 (187)
Q Consensus 61 --------~~~~~~G~~~-~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~g~~~TgD~~~~d~~ 129 (187)
....++|+|+ +++++|+|++|.++++|++|||+|+ |+.++ ||++++.+...+.+|||+|||+|++ +|
T Consensus 374 ~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~GEl~v~-g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~-~d 451 (576)
T 3gqw_A 374 PGAETRAVSTFVNCGKALPEHGIEIRNEAGMPVAERVVGHICIS-GPSLMSGYFGDQVSQDEIAATGWLDTGDLGYL-LD 451 (576)
T ss_dssp CCTTCCCEEEEEBCCEECTTCEEEEECTTSCBCCTTBCEEEEEE-STTSCCCBTTCHHHHHHHHHHSCEEEEEEEEE-ET
T ss_pred cCccccCccceeecCCcCCCCeEEEECCCCCCCCCCCeEEEEEe-CccccccccCCccccccccCCCeeeccceEEE-EC
Confidence 0112899999 9999999999999999999999999 99999 9999998888778999999999999 69
Q ss_pred CeEEE------------EEeCcccHHHH---------------------------------------HHHHHhcC-cCCC
Q 046701 130 RCLNM------------WKISPTEVDAV---------------------------------------KEFCKRNV-ASFK 157 (187)
Q Consensus 130 g~l~~------------~~i~~~eiE~~---------------------------------------~~~~~~~l-~~~~ 157 (187)
|++++ ++|+|.|||++ .+++++++ +.++
T Consensus 452 G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 531 (576)
T 3gqw_A 452 GYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAFVTAQEKIILQIQCRISDEERRGQLIHALAARIQSEFG 531 (576)
T ss_dssp TEEEEEEETTTCEEETTEEECHHHHHHHHTTSSSCCTTSEEEEECTTSCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CEEEEEecCcceEEECCEEECHHHHHHHHHhCcccccccEEEEEcCCccEEEEEEEecCchhHHHHHHHHHHHHHHHHhC
Confidence 99998 89999999998 55677777 6799
Q ss_pred CccEEEEec--CCCCCCCCCcccHHHHHhhh
Q 046701 158 VPKKVFIAD--SLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 158 ~P~~i~~v~--~lP~~t~~GKi~r~~l~~~~ 186 (187)
+|..+.+++ +|| +|++||++|+.|++++
T Consensus 532 ~p~~i~~v~~~~lP-~t~~GKi~r~~l~~~~ 561 (576)
T 3gqw_A 532 VTAAIDLLPPHSIP-RTSSGKPARAEAKKRY 561 (576)
T ss_dssp CCEEEEEECSSCSC-BCTTSSBCHHHHHHHH
T ss_pred CceeEEEECCCCcC-cCCCccchHHHHHHHH
Confidence 999999987 899 9999999999999976
No 29
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.96 E-value=1.3e-30 Score=240.47 Aligned_cols=180 Identities=17% Similarity=0.225 Sum_probs=150.2
Q ss_pred cccchHhhhhhcCCCCCCceeEEEEecCCCCCCce------e-CCeEEceecCceeecc-----C-CCCCCCCCCCcccc
Q 046701 3 MNPLSIHGAAQLTITPYTNVFLFYKGRVYLPPRLE------F-GCFVTSAISVCTVFVL-----L-PKNGPHKASSVGKP 69 (187)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~lr~i~~~G~~l~~~~~------~-~~~i~~~YG~~~~~~~-----~-~~~~~~~~~~~G~~ 69 (187)
++|.++..+.+.....+++||.+++|||++++++. + +..++|.||+++++.. . .........++|+|
T Consensus 703 ~~p~~~~~l~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p 782 (1304)
T 2vsq_A 703 ATTALFNLLTDAGEDWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKP 782 (1304)
T ss_dssp EEHHHHHHHHHHCSHHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEE
T ss_pred ccHHHHHHHHhhchhcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCcee
Confidence 45566655544333346889999999999998776 3 4689999999443221 1 11122345789999
Q ss_pred c-ceeEEEeCCCCCcCCCCCceeEEEEeCCCee--eecChhhhhhccc-------cCeeeeCceEEEeCCCeEEE-----
Q 046701 70 V-RREMAIPDENGVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ-------FGWFLSGDLGYFDSQRCLNM----- 134 (187)
Q Consensus 70 ~-~~~v~i~~~~g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~-------~g~~~TgD~~~~d~~g~l~~----- 134 (187)
+ +++++|+|+++.+++.|++|||+|+ |++++ |||+++.|...|. ++||+|||+|++++||++++
T Consensus 783 ~~~~~~~i~d~~~~~~p~G~~GEl~i~-G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d 861 (1304)
T 2vsq_A 783 ISNASVYILNEQSQLQPFGAVGELCIS-GMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRID 861 (1304)
T ss_dssp CTTEEEEEECTTSCBCCTTCCEEEEEE-ETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGG
T ss_pred eCCCEEEEECCCcCCCCCCCceEEEEe-ccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCC
Confidence 9 9999999999999999999999999 99999 9999999988873 24999999999999999999
Q ss_pred -------EEeCcccHHHH---------------------------------------HHHHHhcCcCCCCccEEEEecCC
Q 046701 135 -------WKISPTEVDAV---------------------------------------KEFCKRNVASFKVPKKVFIADSL 168 (187)
Q Consensus 135 -------~~i~~~eiE~~---------------------------------------~~~~~~~l~~~~~P~~i~~v~~l 168 (187)
++|.|.|||++ +++++++|+.|++|..++++++|
T Consensus 862 ~qvki~G~rie~~eIE~~l~~~p~V~~a~V~~~~~~~~~~~l~a~vv~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~l 941 (1304)
T 2vsq_A 862 DQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLVNRTQLSAEDVKAHLKKQLPAYMVPQTFTFLDEL 941 (1304)
T ss_dssp GEEEETTEEEEHHHHHHHHHHSSSCCEEEEEEECCSSSCCEEEEEEECSSSSCHHHHHHHHHHHSCGGGSCSEEEEESCC
T ss_pred CEEEECCEeeCHHHHHHHHHhCCCCceEEEEEEecCCCCEEEEEEEeCCCCCCHHHHHHHHHHhChHhhhccEEEEeccc
Confidence 89999999998 77889999999999999999999
Q ss_pred CCCCCCCcccHHHHHh
Q 046701 169 SGKPLTGKIQRRIVAE 184 (187)
Q Consensus 169 P~~t~~GKi~r~~l~~ 184 (187)
| +|++|||+|+.|.+
T Consensus 942 P-~t~~GKidR~~L~~ 956 (1304)
T 2vsq_A 942 P-LTTNGKVNKRLLPK 956 (1304)
T ss_dssp C-CCSSCSSCCSCCCC
T ss_pred C-CCCCcccCHhhcCC
Confidence 9 99999999998864
No 30
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.96 E-value=2.3e-30 Score=221.67 Aligned_cols=167 Identities=16% Similarity=0.220 Sum_probs=135.9
Q ss_pred CCCCCCceeEEEEecCCCCCCce------e------CCeEEceecCceeec---cCC-----------------------
Q 046701 15 TITPYTNVFLFYKGRVYLPPRLE------F------GCFVTSAISVCTVFV---LLP----------------------- 56 (187)
Q Consensus 15 ~~~~~~~lr~i~~~G~~l~~~~~------~------~~~i~~~YG~~~~~~---~~~----------------------- 56 (187)
...++++||.+++||+++++++. + +..+++.||+++++. ...
T Consensus 284 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (590)
T 3kxw_A 284 EGLDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFA 363 (590)
T ss_dssp TTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBC
T ss_pred cCCCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeec
Confidence 45678999999999999999887 3 236999999933221 110
Q ss_pred ---CCCCCCCCCccccc-ceeEEEeCCC-CCcCCCCCceeEEEEeCCCee--eecChhhhhhcccc-------C--eeee
Q 046701 57 ---KNGPHKASSVGKPV-RREMAIPDEN-GVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQF-------G--WFLS 120 (187)
Q Consensus 57 ---~~~~~~~~~~G~~~-~~~v~i~~~~-g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~~-------g--~~~T 120 (187)
........++|+|+ + ++|+|++ +.++++|++|||+|+ |++++ ||++++.+...|.+ | ||+|
T Consensus 364 ~~~~~~~~~~~~~G~p~~~--v~i~d~~~~~~~~~g~~GEl~v~-g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~T 440 (590)
T 3kxw_A 364 DDNSPGSYKLVSSGNPIQE--VKIIDPDTLIPCDFDQVGEIWVQ-SNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRT 440 (590)
T ss_dssp CTTCTTCEEEECCCEESSE--EEEECTTTCCBCCTTBCEEEEEE-STTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEE
T ss_pred cCCCCCcceEeccCCCCCC--eEEEcCCCCcCCCCCCEEEEEEe-CCcccccccCChhHHHHHHhccccCCCCCCcEEec
Confidence 01112346899999 7 8889965 899999999999999 99999 99999999888853 5 9999
Q ss_pred CceEEEeCCCeEEE------------EEeCcccHHHH-------------------------------------------
Q 046701 121 GDLGYFDSQRCLNM------------WKISPTEVDAV------------------------------------------- 145 (187)
Q Consensus 121 gD~~~~d~~g~l~~------------~~i~~~eiE~~------------------------------------------- 145 (187)
||+|++| +|++++ +||+|.|||++
T Consensus 441 GDlg~~d-dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~v~~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 519 (590)
T 3kxw_A 441 GDLGFLH-ENELYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFVIQEEHEYKLTVMCEVKNRFMDDVAQD 519 (590)
T ss_dssp EEEEEEE-TTEEEEEEESSCHHHHHHHTTHHHHHHHHHHHSGGGGGEEEEEEEEEEETTEEEEEEEEEESCTTCCHHHHH
T ss_pred CcEEEEE-CCEEEEEcCccceEEECCEecCHHHHHHHHHhcCccccCccEEEEEecCCCCceEEEEEEeccccccchhHH
Confidence 9999999 999999 89999999986
Q ss_pred --HHHHHhcCcC-CCCcc-EEEEe--cCCCCCCCCCcccHHHHHhhh
Q 046701 146 --KEFCKRNVAS-FKVPK-KVFIA--DSLSGKPLTGKIQRRIVAELR 186 (187)
Q Consensus 146 --~~~~~~~l~~-~~~P~-~i~~v--~~lP~~t~~GKi~r~~l~~~~ 186 (187)
.++|+++++. +++|. .+.++ ++|| +|++|||+|+.|++++
T Consensus 520 ~l~~~l~~~l~~~~~~p~~~i~~v~~~~lP-~t~sGKi~R~~L~~~~ 565 (590)
T 3kxw_A 520 NLFNEIFELVYENHQLEVHTIVLIPLKAMP-HTTSGKIRRNFCRKHL 565 (590)
T ss_dssp HHHHHHHHHHHHHHSCCCCEEEEEETTCSC-CCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceeEEEEECCCccC-cCCCcHHHHHHHHHHH
Confidence 5667777774 78886 67766 7999 9999999999999976
No 31
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.94 E-value=6.3e-28 Score=195.88 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=127.7
Q ss_pred cccchHhhhhhc--CCCCCCceeEEEEecCCCCCCce-----eCCeEEceecCceeec--cCCCCCCCCCCCccccc-ce
Q 046701 3 MNPLSIHGAAQL--TITPYTNVFLFYKGRVYLPPRLE-----FGCFVTSAISVCTVFV--LLPKNGPHKASSVGKPV-RR 72 (187)
Q Consensus 3 ~~~~~~~~~~~~--~~~~~~~lr~i~~~G~~l~~~~~-----~~~~i~~~YG~~~~~~--~~~~~~~~~~~~~G~~~-~~ 72 (187)
++|.++..+.+. ...++++||.+++||+++++++. +++++++.||+++++. ..........+.+|.+. ++
T Consensus 129 ~~P~~l~~ll~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~YG~TEt~~~~~~~~~~~~~~g~~~~~~pgv 208 (358)
T 4gs5_A 129 MVPMQLQSILENSATSGQVDRLGKVLLGGAPVNHALAMQISDLAMPVYQSYGMTETVSHVALKALNGPEASELYVFLPGI 208 (358)
T ss_dssp ECHHHHHHHHHCTTTGGGGGGGCSEEECSSCCCHHHHHHHHTCSSCEEEEEECGGGSSEEEEEECSSTTCCSCEEECTTC
T ss_pred cChHHHHHhhccccccccCCcceEEEEcccCCCchheecccccCceEEeccccccccceeecccccccccceeeccCCCe
Confidence 456666655432 23468999999999999999888 6899999999944322 11111234567888888 88
Q ss_pred eEEEeCCCCCcCCCCCceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeCCCeEEE-----------EEeCccc
Q 046701 73 EMAIPDENGVDQKANVNGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDSQRCLNM-----------WKISPTE 141 (187)
Q Consensus 73 ~v~i~~~~g~~~~~g~~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~~g~l~~-----------~~i~~~e 141 (187)
++.+.++ ||++++ ++. ..+|||+|||+|++|++|++++ +||+|.|
T Consensus 209 ~~~~~~~----------Gel~~~-g~~-------------~~~g~~~TGDlg~~d~~g~~~~GR~dd~Ik~~G~~v~p~e 264 (358)
T 4gs5_A 209 QYGVDER----------GCLHIS-GAV-------------TNGQTVQTNDLVEIHGNAFQWIGRADNVINSGGVKIVLDQ 264 (358)
T ss_dssp EEEECTT----------SEEEEE-SGG-------------GTTCCEEEEEEEEECSSEEEEEEEGGGEEEETTEEEEHHH
T ss_pred EEEecCc----------CceEEe-ccc-------------ccCcceecCCccccccCceEEcccccCeEEECCEEECHHH
Confidence 8876543 999999 642 1378999999999999997666 8999999
Q ss_pred HHHH--------------------------------------------HHHHHhcCcCCCCccEEEEecCCCCCCCCCcc
Q 046701 142 VDAV--------------------------------------------KEFCKRNVASFKVPKKVFIADSLSGKPLTGKI 177 (187)
Q Consensus 142 iE~~--------------------------------------------~~~~~~~l~~~~~P~~i~~v~~lP~~t~~GKi 177 (187)
||++ +++|+++|+.|++|++|+++++|| +|++|||
T Consensus 265 IE~~l~~~~~~p~V~~a~vv~~~~d~~~ge~~~a~v~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP-~t~~GKi 343 (358)
T 4gs5_A 265 IDQRIAAVFHHLNIGNAFFCWWEPDAKLGQKLVLVIENAMPEALTERLTAEIRSRVSTYENPKHIYFAKAFA-KTQTDKI 343 (358)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEEEEETTTEEEEEEEEESCCCHHHHHHHHHHHHHHSCGGGSCSCEEEESSCC-BCTTSCB
T ss_pred HHHHHHHhccCCCccEEEEEEecCCccCCEEEEEEEECCCCCcCHHHHHHHHHhhCCCCCCceEEEEECCcC-CCCCCCh
Confidence 9964 778999999999999999999999 9999999
Q ss_pred cHHHHHhhhC
Q 046701 178 QRRIVAELRK 187 (187)
Q Consensus 178 ~r~~l~~~~~ 187 (187)
+|++|++++.
T Consensus 344 ~R~~L~~~l~ 353 (358)
T 4gs5_A 344 DKRATFQKLS 353 (358)
T ss_dssp CHHHHHHHTC
T ss_pred hHHHHHHHhh
Confidence 9999999864
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.91 E-value=6.1e-25 Score=182.05 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=115.0
Q ss_pred CCCceeEEEEecCCCCCCce------eCCeEEceecCceee---ccCCCCCCCCCCCccccc-ceeEEEeC-CCCCcCCC
Q 046701 18 PYTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTVF---VLLPKNGPHKASSVGKPV-RREMAIPD-ENGVDQKA 86 (187)
Q Consensus 18 ~~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~~---~~~~~~~~~~~~~~G~~~-~~~v~i~~-~~g~~~~~ 86 (187)
++++||.+++||+++++++. ||+.+++.||+++++ .... ......+|.+. ++.++|+| ++|+++++
T Consensus 204 ~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~---~~~~~g~~~~~~~~~v~i~d~~~g~~~~~ 280 (436)
T 3qov_A 204 RETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNGPGVAFE---CQEQNGMHFWEDCYLVEIIDPETGEPVPE 280 (436)
T ss_dssp TSSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTEEEEEEE---CTTCSSEEECTTTEEEEEECTTTCSBCST
T ss_pred ccCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcCCeeEEe---cCCCCeeEEccCceEEEEEECCCCCCCCC
Confidence 37899999999999999888 699999999995431 1111 11223477788 99999999 78999999
Q ss_pred CCceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeCCC------e---EEE------------EEeCcccHHHH
Q 046701 87 NVNGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDSQR------C---LNM------------WKISPTEVDAV 145 (187)
Q Consensus 87 g~~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~~g------~---l~~------------~~i~~~eiE~~ 145 (187)
|+.|||+++ +. +...+.++||+|||+|+++++| + +++ ++|+|.|||++
T Consensus 281 g~~Gel~v~-~~----------~~~~~~~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~ 349 (436)
T 3qov_A 281 GEIGELVLT-TL----------DREMMPLIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKI 349 (436)
T ss_dssp TCCEEEEEE-ES----------SCCSSCCCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHH
T ss_pred CCceEEEEe-cc----------CcCCceEEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHH
Confidence 999999999 53 3445568999999999999998 4 355 89999999998
Q ss_pred --------------------------------------------HHHHHhcCcCC-CCccEEEEec--CCCCCCCCCccc
Q 046701 146 --------------------------------------------KEFCKRNVASF-KVPKKVFIAD--SLSGKPLTGKIQ 178 (187)
Q Consensus 146 --------------------------------------------~~~~~~~l~~~-~~P~~i~~v~--~lP~~t~~GKi~ 178 (187)
.++++++|+.+ ++|..|.+++ +|| +|+ ||++
T Consensus 350 l~~~p~v~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~~i~~v~~~~lP-~t~-GKi~ 427 (436)
T 3qov_A 350 LVQFPELGSNYLITLETVNNQDEMIVEVELSDLSTDNYIELEKIRRDIIRQLKDEILVTPKVKLVKKGSLP-QSE-GKAV 427 (436)
T ss_dssp HTTCTTEEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHSSCCEEEEECTTCCC---------
T ss_pred HHhCcCcCCcEEEEEEcCCCCcEEEEEEEEcCccccchhhHHHHHHHHHHHHHHhcCCceEEEEeCCCccc-CcC-Ccce
Confidence 45677778888 8999999999 999 999 9999
Q ss_pred HHHH
Q 046701 179 RRIV 182 (187)
Q Consensus 179 r~~l 182 (187)
|...
T Consensus 428 R~~~ 431 (436)
T 3qov_A 428 RVKD 431 (436)
T ss_dssp CEEE
T ss_pred EEEe
Confidence 8643
No 33
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.89 E-value=3e-24 Score=178.19 Aligned_cols=153 Identities=13% Similarity=0.079 Sum_probs=118.7
Q ss_pred CCceeEEEEecCCCCCCce------eCCeEEceecCcee-ec-cCCCCCCCCCCCccccc-ceeEEEeC-CCCCcCCCCC
Q 046701 19 YTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTV-FV-LLPKNGPHKASSVGKPV-RREMAIPD-ENGVDQKANV 88 (187)
Q Consensus 19 ~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~-~~-~~~~~~~~~~~~~G~~~-~~~v~i~~-~~g~~~~~g~ 88 (187)
+++||.+++||+++++++. ||+++++.||++++ +. ..... .......+.+. ++.++|+| ++|+++++|+
T Consensus 211 ~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~-~~~~~g~~~~~~~~~~~i~d~~~g~~~~~G~ 289 (443)
T 2y4o_A 211 ESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACEC-VETKDGPVIWEDHFYPEIIDPVTGEVLPDGS 289 (443)
T ss_dssp GSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETTTTEEEEEEEC-TTTCCSEEECTTTEEEEEECTTTCCBCCTTC
T ss_pred cCCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchhhcCCeEEecc-CCCCCceEEccCCeEEEEEcCCCCCCCCCCC
Confidence 4899999999999999887 69999999999553 11 11000 11111255577 89999999 5799999999
Q ss_pred ceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeCC-CeE-----EE------------EEeCcccHHHH-----
Q 046701 89 NGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDSQ-RCL-----NM------------WKISPTEVDAV----- 145 (187)
Q Consensus 89 ~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~~-g~l-----~~------------~~i~~~eiE~~----- 145 (187)
.|||+++ + .+...|.++||+|||+|++|++ |++ ++ ++|+|.|||++
T Consensus 290 ~Gel~v~-~----------~t~~~~p~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p 358 (443)
T 2y4o_A 290 QGELVFT-S----------LTKEAMPVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALP 358 (443)
T ss_dssp CEEEEEE-E----------SSCSSSCCSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHTST
T ss_pred ceEEEEe-C----------CCcccChhheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHhCc
Confidence 9999999 5 3344456799999999999999 985 45 89999999998
Q ss_pred --------------------------H---------------HHHHhcCcCC-CCccEEEEe--cCCCCCCCCCcccHHH
Q 046701 146 --------------------------K---------------EFCKRNVASF-KVPKKVFIA--DSLSGKPLTGKIQRRI 181 (187)
Q Consensus 146 --------------------------~---------------~~~~~~l~~~-~~P~~i~~v--~~lP~~t~~GKi~r~~ 181 (187)
. ++|+++|+.+ ++|..|.++ ++|| +|++||++|+.
T Consensus 359 ~V~~~~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~~v~~v~~~~lP-~t~~GKi~r~~ 437 (443)
T 2y4o_A 359 LLSGQFQITLSRDGHMDRLDLAVELRSEAAASVTDGERAALARELQHRIKTMVGVSSGVTVLAAGGIP-ATATGKARRVI 437 (443)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEEEECHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTCSC-CCTTSCCCSEE
T ss_pred CcCccEEEEEecCCCCceEEEEEEECCcccccchhhHHHHHHHHHHHHHHHHhCCceEEEEeCCCccc-CccCCcceEEE
Confidence 3 2456667765 599999888 5999 99999999975
Q ss_pred HHh
Q 046701 182 VAE 184 (187)
Q Consensus 182 l~~ 184 (187)
.++
T Consensus 438 ~~r 440 (443)
T 2y4o_A 438 DRR 440 (443)
T ss_dssp ECC
T ss_pred ecc
Confidence 443
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.89 E-value=9.1e-24 Score=175.04 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=118.1
Q ss_pred CCceeEEEEecCCCCCCce------eCCeEEceecCcee-ec-cCCCCCCCCCCCccccc-ceeEEEeC-CCCCcCCCCC
Q 046701 19 YTNVFLFYKGRVYLPPRLE------FGCFVTSAISVCTV-FV-LLPKNGPHKASSVGKPV-RREMAIPD-ENGVDQKANV 88 (187)
Q Consensus 19 ~~~lr~i~~~G~~l~~~~~------~~~~i~~~YG~~~~-~~-~~~~~~~~~~~~~G~~~-~~~v~i~~-~~g~~~~~g~ 88 (187)
+++||.+++||+++++++. ||+++++.||++++ +. ..... ......++.+. ++.++|+| ++|+++++|+
T Consensus 209 ~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~-~~~~~g~~~~~~~~~~~i~d~~~g~~~~~g~ 287 (437)
T 2y27_A 209 QSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSEVMGPGVASEC-VETKDGPTIWEDHFYPEIIDPETGEVLPDGE 287 (437)
T ss_dssp GSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETTTTEEEEEECC-TTTCSSCEECTTTEEEEEECTTTCCBCCTTC
T ss_pred cCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchhhcCCeeEEec-CCCCCceeEccCceEEEEEcCCCCCCCCCCC
Confidence 4899999999999999887 69999999999553 21 11010 11111366677 89999999 5699999999
Q ss_pred ceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeC-CCeE-----EE------------EEeCcccHHHH-----
Q 046701 89 NGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDS-QRCL-----NM------------WKISPTEVDAV----- 145 (187)
Q Consensus 89 ~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~-~g~l-----~~------------~~i~~~eiE~~----- 145 (187)
.|||+++ + .+...+.++||+|||+|++|+ +|++ ++ ++|+|.|||++
T Consensus 288 ~Gel~v~-~----------~t~~~~~~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p 356 (437)
T 2y27_A 288 LGELVFT-S----------LTKEALPIIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQR 356 (437)
T ss_dssp CEEEEEE-E----------SSCSSSCCCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCT
T ss_pred ccEEEEe-c----------CCcCCchhheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHhCc
Confidence 9999999 5 344455679999999999999 6985 45 89999999998
Q ss_pred ---------------------------------------HHHHHhcCcCC-CCccEEEEe--cCCCCCCCCCcccHHH
Q 046701 146 ---------------------------------------KEFCKRNVASF-KVPKKVFIA--DSLSGKPLTGKIQRRI 181 (187)
Q Consensus 146 ---------------------------------------~~~~~~~l~~~-~~P~~i~~v--~~lP~~t~~GKi~r~~ 181 (187)
.++|+++|+.+ ++|..|.++ ++|| +|+ ||++|+.
T Consensus 357 ~V~~~~vv~~~~~~~~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~~v~~v~~~~lP-~t~-GKi~r~~ 432 (437)
T 2y27_A 357 ALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQVAKQALAYDIKSLIGVTAVINVLPVNGIE-RSV-GKARRVV 432 (437)
T ss_dssp TBCSCCEEEEEEETTEEEEEEEECBCTTTTTCHHHHHHHHHHHHHHHHHHHCCCEEEEECCTTCSC-CCS-SSCCCEE
T ss_pred CcCccEEEEEeecCCCceEEEEEEECCCccchhhhHHHHHHHHHHHHHHhcCCceEEEEeCCCCcc-CCC-CcceEEE
Confidence 34677778877 699899998 5999 999 9999864
No 35
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=99.83 E-value=4.4e-21 Score=160.16 Aligned_cols=118 Identities=14% Similarity=0.207 Sum_probs=95.2
Q ss_pred CCCCCCceeEEEEecCCCCCCce------eC------CeEEceecCceee---ccCCCCC--------------------
Q 046701 15 TITPYTNVFLFYKGRVYLPPRLE------FG------CFVTSAISVCTVF---VLLPKNG-------------------- 59 (187)
Q Consensus 15 ~~~~~~~lr~i~~~G~~l~~~~~------~~------~~i~~~YG~~~~~---~~~~~~~-------------------- 59 (187)
...++++||.+++||+++++++. ++ +.+++.||+++++ .......
T Consensus 306 ~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 385 (480)
T 3t5a_A 306 AGRDLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPC 385 (480)
T ss_dssp TTCCCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCC
T ss_pred cccchhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeec
Confidence 45678999999999999999988 32 3699999993321 1111100
Q ss_pred ----CCCCCCcccccceeEEEeCCC-CCcCCCCCceeEEEEeCCCee--eecChhhhhhccc------------cCeeee
Q 046701 60 ----PHKASSVGKPVRREMAIPDEN-GVDQKANVNGKMCIREGPMVQ--RINNPEANKTAFQ------------FGWFLS 120 (187)
Q Consensus 60 ----~~~~~~~G~~~~~~v~i~~~~-g~~~~~g~~Gel~v~~~~~~~--y~~~~~~~~~~~~------------~g~~~T 120 (187)
.....++|+|+.++++|+|++ |.+|+.|++|||+|+ |++++ ||++++.+.+.|. +|||+|
T Consensus 386 ~~~~~~~~~~~G~p~~~~~~ivd~~~g~~~~~g~~GEl~v~-g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~T 464 (480)
T 3t5a_A 386 AGGGATSLISYMLPRSPIVRIVDSDTCIECPDGTVGEIWVH-GDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRT 464 (480)
T ss_dssp CSSSCEEEECEECCSSSEEEEEETTTTEECCTTBCEEEEEE-STTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEE
T ss_pred CCCCcceeeecCcccCCEEEEEcCCCCcCCCCCCEEEEEEe-CCccccccccCcchhHHHHhhhhccccCCCCCCCeeec
Confidence 123458999997789999965 899999999999999 99999 9999999988883 579999
Q ss_pred CceEEEeCCCeEEE
Q 046701 121 GDLGYFDSQRCLNM 134 (187)
Q Consensus 121 gD~~~~d~~g~l~~ 134 (187)
||+|++| ||++++
T Consensus 465 GDlg~~d-dG~l~~ 477 (480)
T 3t5a_A 465 GDSGFVT-DGKMFI 477 (480)
T ss_dssp EEEEEEE-TTEEEE
T ss_pred cceeeEE-CCEEEE
Confidence 9999998 999986
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.32 E-value=3.4e-13 Score=109.15 Aligned_cols=109 Identities=9% Similarity=0.028 Sum_probs=76.9
Q ss_pred ccchHhhhhhc---CCCCCCceeEEEEecCCCCCCce-------e-CCeEEceecCceeeccCCCCCCCCCC-Ccccc--
Q 046701 4 NPLSIHGAAQL---TITPYTNVFLFYKGRVYLPPRLE-------F-GCFVTSAISVCTVFVLLPKNGPHKAS-SVGKP-- 69 (187)
Q Consensus 4 ~~~~~~~~~~~---~~~~~~~lr~i~~~G~~l~~~~~-------~-~~~i~~~YG~~~~~~~~~~~~~~~~~-~~G~~-- 69 (187)
+|.++..+.+. ...++++||.+++||+++++++. | ++.+++.||+++++... ..+.. ++|+|
T Consensus 212 ~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~----~~~~~~~~G~~~~ 287 (369)
T 3hgu_A 212 TPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVS----RSLLITSESQQVI 287 (369)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEE----EECCBCTTCSSCE
T ss_pred CHHHHHHHHhhhhhhccccCCeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcce----eccccccCCCccc
Confidence 45555544332 11356899999999999999887 4 88999999995543322 11222 58999
Q ss_pred ----c-ceeEEEeCC-CCCcCCCCCceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeC
Q 046701 70 ----V-RREMAIPDE-NGVDQKANVNGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDS 128 (187)
Q Consensus 70 ----~-~~~v~i~~~-~g~~~~~g~~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~ 128 (187)
+ +++++|+|+ +|+++++|++|||+|+ +. +...+ --+|+|||++++.+
T Consensus 288 ~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~vt-~l----------~~~~~-l~ry~tgD~~~~~~ 340 (369)
T 3hgu_A 288 YDSFSPFITYDVVDSITAQTVEYGERGNVIVT-HL----------SPWAF-YPRVAERDTAIRLP 340 (369)
T ss_dssp EECCTTTEEEEEECTTTCSBCCTTCEEEEEEE-EE----------ETTEE-EEEEEEEEEEEEEC
T ss_pred ccCCCCCeEEEEECCCCCcCCCCCCceEEEEE-Ec----------Ccccc-cccccCCceEEEec
Confidence 9 999999996 9999999999999998 42 11222 22467777776643
No 37
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=98.04 E-value=6.6e-07 Score=59.86 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=22.7
Q ss_pred HHHHHhcCcC-CCCccEEEEec--CCCCCCCCCcccHH-HHHhhh
Q 046701 146 KEFCKRNVAS-FKVPKKVFIAD--SLSGKPLTGKIQRR-IVAELR 186 (187)
Q Consensus 146 ~~~~~~~l~~-~~~P~~i~~v~--~lP~~t~~GKi~r~-~l~~~~ 186 (187)
.+.+++.+.. +.+|..+.+++ +|| +| +||++|. .+|+.|
T Consensus 67 ~~~i~~~l~~~~gv~~~v~~v~~~~lP-rt-sGKi~Rv~D~R~~~ 109 (109)
T 3lax_A 67 TREITRQLKDEILVTPRVKLVPKGALP-KS-EGKAVRVKDLRKTF 109 (109)
T ss_dssp HHHHHHHHHHHHSSCCEEEEECTTCSC-CC----CCCEEECSCCC
T ss_pred HHHHHHHHHHHhCCccceEEEcCCeec-CC-CCCcchhhhhccCC
Confidence 4445555532 34566788875 899 98 7999984 356543
No 38
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=97.36 E-value=6.9e-05 Score=49.93 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCc-CCCCccEEEEec--CCCCCCCCCcccHH
Q 046701 143 DAVKEFCKRNVA-SFKVPKKVFIAD--SLSGKPLTGKIQRR 180 (187)
Q Consensus 143 E~~~~~~~~~l~-~~~~P~~i~~v~--~lP~~t~~GKi~r~ 180 (187)
++..+++++.+. .+.+|..|.+++ +|| +| +||++|.
T Consensus 64 ~~l~~~i~~~l~~~~~~~~~v~~v~~~~lP-rt-sGKi~R~ 102 (109)
T 3gxs_A 64 QALTREITRQLKDEILVTPRVKLVPKGALP-KS-EGKAVRV 102 (109)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEEECTTCSC-CC----CCCE
T ss_pred HHHHHHHHHHHHHhhCCceEEEEECCCCcc-CC-CCceEEE
Confidence 344555555553 345556899998 999 99 9999874
No 39
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=91.35 E-value=0.33 Score=41.62 Aligned_cols=53 Identities=9% Similarity=0.040 Sum_probs=38.3
Q ss_pred cCCCCCceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeC--C--CeEEE------------EEeCcccHHHHH
Q 046701 83 DQKANVNGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDS--Q--RCLNM------------WKISPTEVDAVK 146 (187)
Q Consensus 83 ~~~~g~~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~--~--g~l~~------------~~i~~~eiE~~~ 146 (187)
.+..|+.+||+++ ...- +| .|++||+.+++. + ..+.+ +++++.+||++.
T Consensus 392 eVe~G~~YelViT-t~~G-L~-------------RYr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~~~v~~av 456 (609)
T 4b2g_A 392 HVEVGKEYELVIT-TYAG-LY-------------RYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAV 456 (609)
T ss_dssp GCCTTCEEEEEEE-CTTS-CC-------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHH
T ss_pred HcCCCCeEEEehh-hhhh-hh-------------heecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCHHHHHHHH
Confidence 5778999999998 3211 11 379999999984 3 34444 889999999996
Q ss_pred HHHH
Q 046701 147 EFCK 150 (187)
Q Consensus 147 ~~~~ 150 (187)
....
T Consensus 457 ~~a~ 460 (609)
T 4b2g_A 457 DNAS 460 (609)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 40
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=85.04 E-value=2.3 Score=36.30 Aligned_cols=110 Identities=7% Similarity=-0.031 Sum_probs=62.8
Q ss_pred eeEEEEecCCCCCCce-----e-CCeEE-ceecCceeeccCCCCCCCCCCCccccc---ceeEEEeC-CC---C-----C
Q 046701 22 VFLFYKGRVYLPPRLE-----F-GCFVT-SAISVCTVFVLLPKNGPHKASSVGKPV---RREMAIPD-EN---G-----V 82 (187)
Q Consensus 22 lr~i~~~G~~l~~~~~-----~-~~~i~-~~YG~~~~~~~~~~~~~~~~~~~G~~~---~~~v~i~~-~~---g-----~ 82 (187)
|..++.||. .+-.. + +.+++ ..|++++.....+..........+..+ ..-++.++ ++ . .
T Consensus 302 l~~~~~G~~--~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~~~~~ffEFip~~~~~~~~~v~l~ 379 (581)
T 4eql_A 302 IETVVTGSM--GQYVPMLNYYCNDLPLVSTTYGSSETTFGINLDPLCKPEDVSYTFMPNMSYFEFIPMDGGDKNDVVDLE 379 (581)
T ss_dssp EEEECSGGG--GGGHHHHHHHHTTCCEECCEEECSSCEEEECSCTTSCGGGCCEEECTTSSEEEEEECSTTCCSSCEEGG
T ss_pred EEEEcCCCh--HHHHHHHHHHcCCCccccCccccccceeeeccCCCCCcccCceeecCCcEEEEEEeccccCCCcEeCHH
Confidence 666666773 22222 3 67776 999995543332222211222233221 33345554 11 1 2
Q ss_pred cCCCCCceeEEEEeCCCeeeecChhhhhhccccCeeeeCceEEEeC--CCeEE--E------------EEeCcccHHHHH
Q 046701 83 DQKANVNGKMCIREGPMVQRINNPEANKTAFQFGWFLSGDLGYFDS--QRCLN--M------------WKISPTEVDAVK 146 (187)
Q Consensus 83 ~~~~g~~Gel~v~~~~~~~y~~~~~~~~~~~~~g~~~TgD~~~~d~--~g~l~--~------------~~i~~~eiE~~~ 146 (187)
.+..|+.+||+++ ...-. | .|++||+.++.. ++.-. + +++++.+||++.
T Consensus 380 eVe~G~~YelViT-t~~GL-~-------------RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v~~al 444 (581)
T 4eql_A 380 DVKLGCTYEPVVT-NFAGL-Y-------------RMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAV 444 (581)
T ss_dssp GCCTTCEEEEEEE-CSSSC-C-------------SEECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHHHHHH
T ss_pred HcCCCceEEEEEe-eccce-e-------------eEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHHHHHH
Confidence 4668999999998 32111 1 379999999986 44333 3 889999999984
Q ss_pred HH
Q 046701 147 EF 148 (187)
Q Consensus 147 ~~ 148 (187)
..
T Consensus 445 ~~ 446 (581)
T 4eql_A 445 SQ 446 (581)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 41
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=76.57 E-value=6.4 Score=33.54 Aligned_cols=97 Identities=10% Similarity=-0.035 Sum_probs=55.0
Q ss_pred CCeEE-ceecCceeeccCCCCCCCCCCCccccc---ceeEEEeC--CCC---------CcCCCCCceeEEEEeCCCeeee
Q 046701 39 GCFVT-SAISVCTVFVLLPKNGPHKASSVGKPV---RREMAIPD--ENG---------VDQKANVNGKMCIREGPMVQRI 103 (187)
Q Consensus 39 ~~~i~-~~YG~~~~~~~~~~~~~~~~~~~G~~~---~~~v~i~~--~~g---------~~~~~g~~Gel~v~~~~~~~y~ 103 (187)
+.+++ ..|++++.....+......++..+..+ ..-++.+. +.+ ..+..|+.+||+++ ...-.
T Consensus 328 ~~p~~~~~Y~ASEg~~gi~~~p~~~~~~~~~~L~p~~~ffEFiP~~~~~~~~~~~v~l~eve~G~~YelviT-t~~GL-- 404 (581)
T 4epl_A 328 DLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEGEEKPVGLTQVKIGEEYEVVIT-NYAGL-- 404 (581)
T ss_dssp TSCEEECCEEETTEEEEECCCTTSCTTTCCEEECTTSCEEEEEEC-------CCCEEGGGCCTTCEEEEEEE-STTSC--
T ss_pred CCccccCceeccceeeeeecCCCCCccccceeecCCcEEEEEEecccccCCCCceeeHHHcCCCCeEEEEEe-eccce--
Confidence 66766 999985543332222222222222221 22234442 211 35778999999999 32111
Q ss_pred cChhhhhhccccCeeeeCceEEEeCC--C--eEEE------------EEeCcccHHHHHHHHH
Q 046701 104 NNPEANKTAFQFGWFLSGDLGYFDSQ--R--CLNM------------WKISPTEVDAVKEFCK 150 (187)
Q Consensus 104 ~~~~~~~~~~~~g~~~TgD~~~~d~~--g--~l~~------------~~i~~~eiE~~~~~~~ 150 (187)
=.|++||+.++..- . .+.+ +++++.+||++.....
T Consensus 405 ------------~RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v~~al~~a~ 455 (581)
T 4epl_A 405 ------------YRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAA 455 (581)
T ss_dssp ------------SSEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHHHHHH
T ss_pred ------------eeEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHHHHHHHHHH
Confidence 13799999998742 2 3333 8899999999955443
No 42
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=22.36 E-value=1.4e+02 Score=18.21 Aligned_cols=15 Identities=13% Similarity=0.237 Sum_probs=10.4
Q ss_pred eeEEEeCCCCCcCCC
Q 046701 72 REMAIPDENGVDQKA 86 (187)
Q Consensus 72 ~~v~i~~~~g~~~~~ 86 (187)
..++++|.+|.|++.
T Consensus 3 ~~v~V~d~~GkPV~g 17 (82)
T 3e8v_A 3 GSVLVTDAEGQPVAD 17 (82)
T ss_dssp EEEEEECTTSCBCTT
T ss_pred EEEEEEcCCCCCCCC
Confidence 456777777777754
Done!