Query 046708
Match_columns 261
No_of_seqs 162 out of 1304
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:40:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046708.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046708hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 1.7E-67 3.6E-72 482.4 20.6 242 6-247 21-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1E-63 2.3E-68 451.7 20.3 234 13-247 1-315 (315)
3 PRK15381 pathogenicity island 100.0 2.6E-54 5.6E-59 398.9 17.7 208 8-244 138-398 (408)
4 cd01847 Triacylglycerol_lipase 100.0 2.3E-53 5.1E-58 378.3 16.5 209 12-246 1-280 (281)
5 cd01846 fatty_acyltransferase_ 100.0 4.1E-49 9E-54 348.2 18.3 206 14-245 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 5.2E-35 1.1E-39 262.0 14.0 232 8-259 25-343 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 6.3E-21 1.4E-25 162.5 7.0 106 107-243 121-234 (234)
8 cd01832 SGNH_hydrolase_like_1 98.5 3.9E-07 8.4E-12 75.4 7.5 84 107-245 100-184 (185)
9 cd01839 SGNH_arylesterase_like 98.3 4E-06 8.6E-11 71.0 10.3 80 112-245 124-203 (208)
10 cd01836 FeeA_FeeB_like SGNH_hy 98.3 1.9E-06 4.1E-11 71.8 6.9 84 112-246 105-188 (191)
11 cd04501 SGNH_hydrolase_like_4 98.3 3.2E-06 6.9E-11 69.9 8.2 92 107-246 91-182 (183)
12 cd01823 SEST_like SEST_like. A 98.2 8.5E-06 1.8E-10 71.2 9.3 140 14-181 2-159 (259)
13 cd01844 SGNH_hydrolase_like_6 98.1 2.5E-05 5.3E-10 64.5 10.6 21 225-245 155-175 (177)
14 PRK10528 multifunctional acyl- 97.9 2.2E-05 4.8E-10 65.9 6.6 24 223-246 159-182 (191)
15 cd00229 SGNH_hydrolase SGNH_hy 97.8 7.7E-05 1.7E-09 59.4 7.3 83 111-245 104-186 (187)
16 cd01827 sialate_O-acetylestera 97.8 0.00017 3.6E-09 59.7 9.0 87 149-246 89-186 (188)
17 cd01825 SGNH_hydrolase_peri1 S 97.7 2.2E-05 4.9E-10 64.8 3.4 96 149-246 77-184 (189)
18 cd01831 Endoglucanase_E_like E 97.7 0.00034 7.4E-09 57.2 9.5 23 224-246 145-167 (169)
19 cd01833 XynB_like SGNH_hydrola 97.6 0.00017 3.6E-09 58.0 6.9 61 145-246 96-156 (157)
20 cd01834 SGNH_hydrolase_like_2 97.6 0.00047 1E-08 56.7 8.8 90 111-246 102-191 (191)
21 cd01822 Lysophospholipase_L1_l 97.5 0.00037 7.9E-09 56.9 7.8 24 223-246 152-175 (177)
22 cd01841 NnaC_like NnaC (CMP-Ne 97.4 0.00055 1.2E-08 55.9 7.3 84 112-245 89-172 (174)
23 cd01828 sialate_O-acetylestera 97.4 0.00055 1.2E-08 55.7 6.7 81 113-246 87-167 (169)
24 cd01829 SGNH_hydrolase_peri2 S 97.3 0.001 2.2E-08 55.6 7.4 92 110-246 106-197 (200)
25 cd01838 Isoamyl_acetate_hydrol 97.1 0.0012 2.6E-08 54.6 6.1 90 114-245 108-197 (199)
26 cd04506 SGNH_hydrolase_YpmR_li 97.0 0.0034 7.4E-08 52.6 7.8 62 143-245 142-203 (204)
27 cd01824 Phospholipase_B_like P 96.9 0.0023 5E-08 57.4 6.3 25 222-246 258-282 (288)
28 cd01830 XynE_like SGNH_hydrola 96.9 0.0026 5.7E-08 53.6 6.3 24 222-245 179-202 (204)
29 cd01835 SGNH_hydrolase_like_3 96.8 0.0019 4.2E-08 53.6 5.2 82 111-245 110-191 (193)
30 cd01820 PAF_acetylesterase_lik 96.8 0.003 6.4E-08 53.7 6.3 81 114-246 129-209 (214)
31 PF13472 Lipase_GDSL_2: GDSL-l 96.8 0.0031 6.6E-08 50.5 5.7 83 107-239 97-179 (179)
32 PF14606 Lipase_GDSL_3: GDSL-l 96.4 0.0062 1.3E-07 50.7 5.3 63 144-245 113-175 (178)
33 cd01821 Rhamnogalacturan_acety 96.4 0.0041 8.8E-08 52.0 4.1 69 146-246 129-197 (198)
34 cd01840 SGNH_hydrolase_yrhL_li 96.3 0.0061 1.3E-07 48.9 4.8 23 223-245 126-148 (150)
35 cd01826 acyloxyacyl_hydrolase_ 96.2 0.013 2.8E-07 52.7 6.4 26 220-245 278-304 (305)
36 cd04502 SGNH_hydrolase_like_7 96.1 0.02 4.4E-07 46.5 6.7 94 148-245 69-169 (171)
37 KOG3035 Isoamyl acetate-hydrol 95.4 0.014 3.1E-07 49.8 3.2 93 113-246 115-207 (245)
38 KOG3670 Phospholipase [Lipid t 90.7 1.7 3.7E-05 40.5 8.8 32 220-253 323-354 (397)
39 cd01838 Isoamyl_acetate_hydrol 84.1 3.4 7.3E-05 33.7 6.2 30 148-177 87-116 (199)
40 COG2755 TesA Lysophospholipase 81.4 0.95 2.1E-05 38.0 1.9 25 222-246 183-207 (216)
41 COG2845 Uncharacterized protei 74.2 6.6 0.00014 35.8 5.1 95 107-245 220-315 (354)
42 PF08331 DUF1730: Domain of un 65.3 17 0.00036 25.8 4.7 65 111-175 9-77 (78)
43 cd01842 SGNH_hydrolase_like_5 59.6 6.7 0.00015 32.8 2.0 20 226-245 161-180 (183)
44 PLN02757 sirohydrochlorine fer 44.0 34 0.00073 27.7 3.8 57 107-185 66-125 (154)
45 COG4030 Uncharacterized protei 43.7 9.8 0.00021 33.2 0.6 25 2-27 197-221 (315)
46 cd00384 ALAD_PBGS Porphobilino 43.3 43 0.00094 30.4 4.6 52 107-175 59-110 (314)
47 PRK13384 delta-aminolevulinic 42.5 43 0.00092 30.5 4.5 52 107-175 69-120 (322)
48 PF00490 ALAD: Delta-aminolevu 42.4 28 0.00061 31.7 3.4 55 107-176 65-119 (324)
49 PRK13717 conjugal transfer pro 40.8 48 0.001 26.1 4.0 26 141-166 70-95 (128)
50 PF08885 GSCFA: GSCFA family; 39.8 38 0.00083 29.8 3.8 65 107-182 160-224 (251)
51 PRK09283 delta-aminolevulinic 39.6 48 0.001 30.2 4.4 52 107-175 67-118 (323)
52 PF01903 CbiX: CbiX; InterPro 39.0 38 0.00082 24.8 3.2 48 107-176 45-92 (105)
53 cd04824 eu_ALAD_PBGS_cysteine_ 38.3 53 0.0011 29.9 4.4 54 107-175 59-113 (320)
54 PF02633 Creatininase: Creatin 38.0 51 0.0011 28.3 4.3 52 107-184 94-145 (237)
55 cd04823 ALAD_PBGS_aspartate_ri 37.1 54 0.0012 29.9 4.3 54 107-175 62-115 (320)
56 cd03416 CbiX_SirB_N Sirohydroc 33.1 57 0.0012 23.7 3.3 47 107-175 52-98 (101)
57 TIGR02744 TrbI_Ftype type-F co 32.2 80 0.0017 24.3 3.9 26 141-166 57-82 (112)
58 cd01823 SEST_like SEST_like. A 31.0 83 0.0018 26.9 4.5 78 142-245 181-258 (259)
59 COG4531 ZnuA ABC-type Zn2+ tra 29.8 1.3E+02 0.0029 27.0 5.4 49 141-195 179-231 (318)
60 COG0113 HemB Delta-aminolevuli 29.7 61 0.0013 29.5 3.3 54 107-175 69-122 (330)
61 KOG4079 Putative mitochondrial 29.1 27 0.00059 27.8 1.0 22 110-131 42-64 (169)
62 PF04914 DltD_C: DltD C-termin 28.0 35 0.00075 26.9 1.4 25 220-244 100-124 (130)
63 PRK03437 3-isopropylmalate deh 27.5 81 0.0018 29.1 3.9 38 154-191 196-233 (344)
64 TIGR02089 TTC tartrate dehydro 26.3 88 0.0019 29.0 3.9 38 154-191 199-236 (352)
65 PF08282 Hydrolase_3: haloacid 25.6 27 0.00059 29.1 0.4 16 12-27 202-217 (254)
66 KOG2794 Delta-aminolevulinic a 25.1 61 0.0013 29.0 2.5 55 107-176 77-131 (340)
67 PLN00123 isocitrate dehydrogen 24.4 1.2E+02 0.0025 28.3 4.3 38 154-191 204-241 (360)
68 PRK03669 mannosyl-3-phosphogly 24.1 40 0.00086 29.4 1.2 18 11-28 205-222 (271)
69 TIGR00175 mito_nad_idh isocitr 24.0 1.3E+02 0.0028 27.7 4.5 39 153-191 180-218 (333)
70 PF06812 ImpA-rel_N: ImpA-rela 23.1 28 0.0006 23.4 0.0 8 225-232 53-60 (62)
71 TIGR01486 HAD-SF-IIB-MPGP mann 23.0 45 0.00098 28.7 1.3 18 12-29 194-211 (256)
72 PRK00772 3-isopropylmalate deh 22.7 1.3E+02 0.0027 28.1 4.2 39 153-191 199-237 (358)
73 COG3581 Uncharacterized protei 22.6 81 0.0018 29.7 2.9 47 107-177 327-373 (420)
74 PF11691 DUF3288: Protein of u 22.2 71 0.0015 23.5 2.0 32 227-260 2-33 (90)
75 PRK08997 isocitrate dehydrogen 22.2 1.4E+02 0.0029 27.6 4.3 38 154-191 183-220 (334)
76 TIGR00169 leuB 3-isopropylmala 21.3 1.4E+02 0.003 27.7 4.2 38 154-191 197-234 (349)
77 PRK08194 tartrate dehydrogenas 21.3 1.1E+02 0.0024 28.3 3.6 38 154-191 196-233 (352)
78 PLN00118 isocitrate dehydrogen 21.0 1.6E+02 0.0034 27.6 4.5 39 153-191 219-257 (372)
79 PF12872 OST-HTH: OST-HTH/LOTU 20.7 1.5E+02 0.0033 19.9 3.5 26 170-195 23-50 (74)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=1.7e-67 Score=482.40 Aligned_cols=242 Identities=35% Similarity=0.599 Sum_probs=215.1
Q ss_pred cccCCCCCeEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCC-CCCCCcccc--cC
Q 046708 6 SSATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGL-PYSPPFLKI--RD 82 (261)
Q Consensus 6 ~~~~~~~~~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl-~~~~~y~~~--~~ 82 (261)
+.+...+++|||||||++|+||++++.+..+++.||||++||+++|+||||||++|+||||+.||+ +.+|||+.. .+
T Consensus 21 ~~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~ 100 (351)
T PLN03156 21 AETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNI 100 (351)
T ss_pred hcccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCc
Confidence 344667999999999999999998776666788999999999878999999999999999999999 788999873 24
Q ss_pred CCCCCCceeeccCCCcCCCCC----------cc---------------------------c-------------------
Q 046708 83 KLPLTGLNYASGSCGILPETG----------RP---------------------------F------------------- 106 (261)
Q Consensus 83 ~~~~~G~NfA~~Ga~~~~~~~----------ql---------------------------F------------------- 106 (261)
.++.+|+|||+||+++++.++ |+ |
T Consensus 101 ~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~ 180 (351)
T PLN03156 101 SDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGR 180 (351)
T ss_pred hhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccc
Confidence 578999999999998875431 22 0
Q ss_pred ----------------------hheccCCcEEEEecCCCCCccCceecccC-CCCcchhhhHHHHHHHHHHHHHHHHHhh
Q 046708 107 ----------------------RLYNLGARKIVMFEIGPIGCIPSITRKNK-HTGRCVEDKNQLVSYFNNMLPTMLQNLT 163 (261)
Q Consensus 107 ----------------------~L~~~GAr~~vv~~lp~lg~~P~~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 163 (261)
+||++|||+|+|+|+||+||+|..+.... ...+|.+.+|.+++.||++|+++|++|+
T Consensus 181 ~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~ 260 (351)
T PLN03156 181 RSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLN 260 (351)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998765421 1357999999999999999999999999
Q ss_pred hhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccc-cCCccCcCCCC-CCCCCCCccEEecCCChHHHHHHHHHH
Q 046708 164 SCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAW-FNGTSGCIPFL-KPCSNANQHYFWDAYHLTEAMYSLFAS 241 (261)
Q Consensus 164 ~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g-~~~~~~C~~~~-~~C~~p~~y~fwD~vHPT~~~h~~iA~ 241 (261)
+++||++|+++|+|.++.++++||++|||++++++||+.| ++....|++.. .+|++|++|+|||++|||+++|+++|+
T Consensus 261 ~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~ 340 (351)
T PLN03156 261 KELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIAN 340 (351)
T ss_pred HhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 77778899755 589999999999999999999999999
Q ss_pred HHHcCC
Q 046708 242 HCINDK 247 (261)
Q Consensus 242 ~~~~~~ 247 (261)
.++++.
T Consensus 341 ~~~~~l 346 (351)
T PLN03156 341 HVVKTL 346 (351)
T ss_pred HHHHHH
Confidence 999863
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1e-63 Score=451.73 Aligned_cols=234 Identities=44% Similarity=0.782 Sum_probs=206.0
Q ss_pred CeEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCCCC-CCCccccc-CCCCCCCce
Q 046708 13 PALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPY-SPPFLKIR-DKLPLTGLN 90 (261)
Q Consensus 13 ~~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl~~-~~~y~~~~-~~~~~~G~N 90 (261)
++|||||||+||+||+.++.+..+++.||||++||++ |+||||||++|+|+||+.||+++ +|+|+... +.++.+|+|
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~N 79 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGVN 79 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccccchhhccce
Confidence 4799999999999999776655457899999999984 99999999999999999999996 77787632 246788999
Q ss_pred eeccCCCcCCCCC----------cc--c----------------------------------------------------
Q 046708 91 YASGSCGILPETG----------RP--F---------------------------------------------------- 106 (261)
Q Consensus 91 fA~~Ga~~~~~~~----------ql--F---------------------------------------------------- 106 (261)
||+|||++++.+. || |
T Consensus 80 fA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 159 (315)
T cd01837 80 FASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYV 159 (315)
T ss_pred ecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccccCCHHHHH
Confidence 9999999875431 22 1
Q ss_pred ------------hheccCCcEEEEecCCCCCccCceecccCC-CCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEE
Q 046708 107 ------------RLYNLGARKIVMFEIGPIGCIPSITRKNKH-TGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVN 173 (261)
Q Consensus 107 ------------~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~-~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~ 173 (261)
+||++|||+|+|+|+||+||+|.++..... ..+|.+.+|++++.||++|+++|++|++++|+++|++
T Consensus 160 ~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 239 (315)
T cd01837 160 PFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVY 239 (315)
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 899999999999999999999998876421 3589999999999999999999999999999999999
Q ss_pred ecchHHHhhhhhCCCCCCCCCCCCcccccc-cCCccCcCCC-CCCCCCCCccEEecCCChHHHHHHHHHHHHHcCC
Q 046708 174 GHAHWLGYDAVINPPKYGLVDSSNPCCIAW-FNGTSGCIPF-LKPCSNANQHYFWDAYHLTEAMYSLFASHCINDK 247 (261)
Q Consensus 174 ~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g-~~~~~~C~~~-~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~~ 247 (261)
+|+|.+++++++||++|||+++.++||+.| ++....|... ..+|.+|++|+|||++|||+++|++||+.+++|.
T Consensus 240 ~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 240 ADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred EehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999987 5666678754 5689999999999999999999999999999873
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=2.6e-54 Score=398.94 Aligned_cols=208 Identities=22% Similarity=0.194 Sum_probs=179.2
Q ss_pred cCCCCCeEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCCCCCCCcccccCCCCCC
Q 046708 8 ATQLAPALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLT 87 (261)
Q Consensus 8 ~~~~~~~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl~~~~~y~~~~~~~~~~ 87 (261)
....|++||||||||||+||+.|+.+. ...||||++| +||||||++|+|||| .|||+. .+
T Consensus 138 ~~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA-------~~pyl~------~~ 197 (408)
T PRK15381 138 SLGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS-------SPHFLG------KE 197 (408)
T ss_pred ccCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec-------cccccC------CC
Confidence 347899999999999999887666543 4579999987 799999999999999 356764 27
Q ss_pred CceeeccCCCcCCC---------C-C---cc----------c-----------------------------hheccCCcE
Q 046708 88 GLNYASGSCGILPE---------T-G---RP----------F-----------------------------RLYNLGARK 115 (261)
Q Consensus 88 G~NfA~~Ga~~~~~---------~-~---ql----------F-----------------------------~L~~~GAr~ 115 (261)
|+|||+|||+++.. . + |+ | +||++|||+
T Consensus 198 G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~~~~aL~lV~iG~NDy~~~~~~~v~~vV~~~~~~l~~Ly~lGARk 277 (408)
T PRK15381 198 MLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTPSHQDLAIFLLGANDYMTLHKDNVIMVVEQQIDDIEKIISGGVNN 277 (408)
T ss_pred CceEeecccccccccccccccCccCCHHHHHHHHHhcCCcEEEEEeccchHHHhHHHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 99999999998631 1 1 32 1 899999999
Q ss_pred EEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCC
Q 046708 116 IVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDS 195 (261)
Q Consensus 116 ~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~ 195 (261)
|+|+|+||+||+|..+.. ...+.+|.+++.||++|+++|++|++++||++|+++|+|+++.++++||++|||+++
T Consensus 278 ~vV~nlpPlGC~P~~~~~-----~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~ 352 (408)
T PRK15381 278 VLVMGIPDLSLTPYGKHS-----DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTE 352 (408)
T ss_pred EEEeCCCCCCCcchhhcc-----CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcc
Confidence 999999999999988743 235789999999999999999999999999999999999999999999999999998
Q ss_pred CCcccccc-cCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHH
Q 046708 196 SNPCCIAW-FNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCI 244 (261)
Q Consensus 196 ~~aCc~~g-~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~ 244 (261)
.. ||+.| .+....|.+...+|. +|+|||.+|||+++|+++|+.+-
T Consensus 353 ~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA~~~~ 398 (408)
T PRK15381 353 NP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFAIMLE 398 (408)
T ss_pred cc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHHHHHH
Confidence 86 99988 555567887777884 99999999999999999999874
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=2.3e-53 Score=378.34 Aligned_cols=209 Identities=22% Similarity=0.280 Sum_probs=175.7
Q ss_pred CCeEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCCCCCCCcccccCCCCCCCcee
Q 046708 12 APALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNY 91 (261)
Q Consensus 12 ~~~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl~~~~~y~~~~~~~~~~G~Nf 91 (261)
|++||||||||+|+||++++. .+| +|+||||||++++|++++.+|++++ +........+|+||
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~------~~~--------~~~gRFsnG~~~~d~~~~~~~~~~~---~~~~~~~~~~G~Nf 63 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG------VGA--------AGGGRFTVNDGSIWSLGVAEGYGLT---TGTATPTTPGGTNY 63 (281)
T ss_pred CCceEEecCcccccCCCCccc------cCC--------CCCcceecCCcchHHHHHHHHcCCC---cCcCcccCCCCcee
Confidence 689999999999999997653 112 2899999999999999999998753 22234567889999
Q ss_pred eccCCCcCCCC----------C---cc--c--------------------------------------------------
Q 046708 92 ASGSCGILPET----------G---RP--F-------------------------------------------------- 106 (261)
Q Consensus 92 A~~Ga~~~~~~----------~---ql--F-------------------------------------------------- 106 (261)
|+|||++++.+ + |+ |
T Consensus 64 A~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (281)
T cd01847 64 AQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGGGFDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAATAAADL 143 (281)
T ss_pred eccCccccCCCCccccccCCCCHHHHHHHHHHhcCCCCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHHHHHHH
Confidence 99999987532 1 33 1
Q ss_pred -----hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHh
Q 046708 107 -----RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGY 181 (261)
Q Consensus 107 -----~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~ 181 (261)
+|+++|||+|+|+++||+||+|.++... ..|.+.++.+++.||++|+++|++|+++ +|+++|+|.+++
T Consensus 144 ~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~ 216 (281)
T cd01847 144 ASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLK 216 (281)
T ss_pred HHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHH
Confidence 8999999999999999999999987653 4688999999999999999999999764 899999999999
Q ss_pred hhhhCCCCCCCCCCCCcccccccCCccCcCC-CCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 182 DAVINPPKYGLVDSSNPCCIAWFNGTSGCIP-FLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 182 ~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~-~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
++++||++|||++++++||+.+ ....|+. ...+|.+|++|+|||.+||||++|++||+.+++.
T Consensus 217 ~i~~nP~~yGf~~~~~~CC~~~--~~~~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 217 EVVANPAAYGFTNTTTPACTST--SAAGSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred HHHhChHhcCccCCCccccCCC--CccccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999865 1112432 2247999999999999999999999999998864
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=4.1e-49 Score=348.24 Aligned_cols=206 Identities=29% Similarity=0.432 Sum_probs=174.6
Q ss_pred eEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCCCCCCCcccccCCCCCCCceeec
Q 046708 14 ALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYAS 93 (261)
Q Consensus 14 ~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl~~~~~y~~~~~~~~~~G~NfA~ 93 (261)
+||||||||||+||+.++... ..+|.+..| |+||||||++|+|+||+.+|++. ...|+|||+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~~-----------~~~~~N~A~ 62 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLSG-----------LKQGYNYAV 62 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCCc-----------cCCcceeEe
Confidence 589999999999998654321 123333334 78999999999999999999863 245899999
Q ss_pred cCCCcCCCC---------C---cc----------------c-----------------------------------hhec
Q 046708 94 GSCGILPET---------G---RP----------------F-----------------------------------RLYN 110 (261)
Q Consensus 94 ~Ga~~~~~~---------~---ql----------------F-----------------------------------~L~~ 110 (261)
+||++...+ . |+ | +|++
T Consensus 63 ~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~~l~~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 142 (270)
T cd01846 63 GGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKLRLPPDTLVAIWIGANDLLNALDLPQNPDTLVTRAVDNLFQALQRLYA 142 (270)
T ss_pred cccccCCcccCCCCCCCCCHHHHHHHHHHhccCCCCCCcEEEEEeccchhhhhccccccccccHHHHHHHHHHHHHHHHH
Confidence 999886431 0 11 0 7889
Q ss_pred cCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCC
Q 046708 111 LGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKY 190 (261)
Q Consensus 111 ~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~y 190 (261)
+|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|++++|+++|+++|+|.++.++++||++|
T Consensus 143 ~g~~~i~v~~~p~~~~~P~~~~~~~~---~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~y 219 (270)
T cd01846 143 AGARNFLVLNLPDLGLTPAFQAQGDA---VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNPAAY 219 (270)
T ss_pred CCCCEEEEeCCCCCCCCcccccCCcc---cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhc
Confidence 99999999999999999999876421 126899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 191 GLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 191 Gf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
||+++.++||+.+ .|.+....|.+|++|+|||.+|||+++|++||+.+++
T Consensus 220 Gf~~~~~~C~~~~-----~~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 220 GFTNVTDPCLDYV-----YSYSPREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred CCCcCcchhcCCC-----ccccccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 9999999999853 2766667999999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=5.2e-35 Score=261.99 Aligned_cols=232 Identities=27% Similarity=0.350 Sum_probs=170.9
Q ss_pred cCCCCCeEEEcCCcccccCCCCCccccccCCCC-CCCCCCCCCCCcccCC--CCCCHHHHHHHhcCC-CCCCCccc----
Q 046708 8 ATQLAPALYVFGDSLFDSGNNNLLPTIARANYL-PYGANFVNKSSTGRFT--NGKTVPDFVAEFLGL-PYSPPFLK---- 79 (261)
Q Consensus 8 ~~~~~~~l~vFGDSlsDtGn~~~~~~~~~~~~~-Pyg~~~~~~~~~gRfS--nG~~~~d~la~~lgl-~~~~~y~~---- 79 (261)
+.++|++|+||||||||+|+........ ..+ -||. . +..+++ +|.+|++++++.||. ...+.++.
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~~--~~~~~~~~-~----~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~ 97 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGHH--GDPGSYGT-I----PGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAAD 97 (370)
T ss_pred cccccceEEEeccchhhcccccCccccc--CCcccccc-c----cCCcccCCCceeeeccchhhhccccccccccccccC
Confidence 4678999999999999999984222111 111 1221 1 333444 467888888888771 11111111
Q ss_pred ccCCCC--CCCceeeccCCCcCCCC-----C--------cc----------c----------------------------
Q 046708 80 IRDKLP--LTGLNYASGSCGILPET-----G--------RP----------F---------------------------- 106 (261)
Q Consensus 80 ~~~~~~--~~G~NfA~~Ga~~~~~~-----~--------ql----------F---------------------------- 106 (261)
+.+..+ ..|.|||+||+++...+ + |+ |
T Consensus 98 ~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~~ggand~~~~ 177 (370)
T COG3240 98 PNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFLWGGANDYLAL 177 (370)
T ss_pred cccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHHHhhcchhhhcc
Confidence 222333 57999999999864332 0 11 0
Q ss_pred ------------------------hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHh
Q 046708 107 ------------------------RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNL 162 (261)
Q Consensus 107 ------------------------~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l 162 (261)
+|.++|||+|+|+++|+++.+|..+... .-...+.+++..||+.|++.|+++
T Consensus 178 ~~~~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~----~~~~~a~~~t~~~Na~L~~~L~~~ 253 (370)
T COG3240 178 PMLKAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG----TEAIQASQATIAFNASLTSQLEQL 253 (370)
T ss_pred cccchhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc----chHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999988752 223388899999999999999987
Q ss_pred hhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccc-cCCccCcCCCCCC-CCCCCccEEecCCChHHHHHHHHH
Q 046708 163 TSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAW-FNGTSGCIPFLKP-CSNANQHYFWDAYHLTEAMYSLFA 240 (261)
Q Consensus 163 ~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g-~~~~~~C~~~~~~-C~~p~~y~fwD~vHPT~~~h~~iA 240 (261)
+ .+|+.+|++.++++|+.||++|||+|++..||... .++ .|.+..+. |..|++|+|||.+|||+++|++||
T Consensus 254 g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~liA 326 (370)
T COG3240 254 G-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHPTTAVHHLIA 326 (370)
T ss_pred c-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCCchHHHHHHH
Confidence 5 78999999999999999999999999999999764 222 56654444 456778999999999999999999
Q ss_pred HHHHcCCCCcCCCChHHhh
Q 046708 241 SHCINDKSFCEPFNLKELV 259 (261)
Q Consensus 241 ~~~~~~~~~~~P~~~~~l~ 259 (261)
++++.. +..|+....|.
T Consensus 327 eyila~--l~ap~~~~~l~ 343 (370)
T COG3240 327 EYILAR--LAAPFSLTILT 343 (370)
T ss_pred HHHHHH--HhCcchhhHHH
Confidence 999987 56666555443
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.83 E-value=6.3e-21 Score=162.53 Aligned_cols=106 Identities=31% Similarity=0.510 Sum_probs=91.1
Q ss_pred hheccCCc-----EEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcC-CceEEEecchHHH
Q 046708 107 RLYNLGAR-----KIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLE-GSTFVNGHAHWLG 180 (261)
Q Consensus 107 ~L~~~GAr-----~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-g~~i~~~D~y~~~ 180 (261)
+|.+.|+| ++++.++||++|.|...........|.+.+++.++.||++|++.+.+|+++++ +.++.++|++..+
T Consensus 121 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~ 200 (234)
T PF00657_consen 121 RLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIF 200 (234)
T ss_dssp HHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHH
T ss_pred HHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHH
Confidence 77789999 99999999999988876654334679999999999999999999999988776 8899999999999
Q ss_pred hhh--hhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHH
Q 046708 181 YDA--VINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHC 243 (261)
Q Consensus 181 ~~i--i~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~ 243 (261)
.+. +.+|.. ++|+|||.+|||+++|++||+++
T Consensus 201 ~~~~~~~~~~~-------------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 201 SDMYGIQNPEN-------------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HHHHHHHHGGH-------------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred HHhhhccCccc-------------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 997 666655 45999999999999999999975
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.49 E-value=3.9e-07 Score=75.41 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=52.6
Q ss_pred hheccCCcEEEEecCCCC-CccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhh
Q 046708 107 RLYNLGARKIVMFEIGPI-GCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVI 185 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~l-g~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~ 185 (261)
++...++ +++++++||. +..|. ....+.....+|+.|++..++. ++.++|++..+.
T Consensus 100 ~i~~~~~-~vil~~~~~~~~~~~~-----------~~~~~~~~~~~n~~l~~~a~~~-------~v~~vd~~~~~~---- 156 (185)
T cd01832 100 RLRAAGA-RVVVFTIPDPAVLEPF-----------RRRVRARLAAYNAVIRAVAARY-------GAVHVDLWEHPE---- 156 (185)
T ss_pred HHHhCCC-EEEEecCCCccccchh-----------HHHHHHHHHHHHHHHHHHHHHc-------CCEEEecccCcc----
Confidence 3434565 5777888876 22111 1223445677888777765432 477888876532
Q ss_pred CCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 186 NPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 186 nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
+ . . .+++.-|++||++++|+++|+.+++
T Consensus 157 -------------~-~-----------------~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 157 -------------F-A-----------------D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred -------------c-C-----------------C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 0 0 1123359999999999999999875
No 9
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.35 E-value=4e-06 Score=70.97 Aligned_cols=80 Identities=14% Similarity=0.043 Sum_probs=52.2
Q ss_pred CCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 112 GARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 112 GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
+..+|++...||+...+.-. ..+....+...+.||+.+++..++. ++.++|++.++..
T Consensus 124 ~~~~iil~~pp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~--------- 181 (208)
T cd01839 124 PAPKILIVAPPPIRTPKGSL------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST--------- 181 (208)
T ss_pred CCCCEEEEeCCccCccccch------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc---------
Confidence 45678888888762111100 1233445677778888777765543 3667887654310
Q ss_pred CCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 192 LVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 192 f~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
...|++|||+++|++||+.++.
T Consensus 182 --------------------------------~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 182 --------------------------------SPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred --------------------------------CCCCccCcCHHHHHHHHHHHHH
Confidence 1269999999999999999875
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.29 E-value=1.9e-06 Score=71.80 Aligned_cols=84 Identities=14% Similarity=0.158 Sum_probs=54.6
Q ss_pred CCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 112 GARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 112 GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
...+|+|.++||++..|.... ......++..+.+|+.+++..+ +++ .+.++|++..+.
T Consensus 105 ~~~~iiv~~~p~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~a~----~~~--~~~~id~~~~~~---------- 162 (191)
T cd01836 105 PGARVVVTAVPPLGRFPALPQ------PLRWLLGRRARLLNRALERLAS----EAP--RVTLLPATGPLF---------- 162 (191)
T ss_pred CCCEEEEECCCCcccCCCCcH------HHHHHHHHHHHHHHHHHHHHHh----cCC--CeEEEecCCccc----------
Confidence 567899999999876653221 1123345556667766666554 333 456778765432
Q ss_pred CCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 192 LVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 192 f~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
.+++.-|++||++++|+++|+.+.+.
T Consensus 163 -----------------------------~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 -----------------------------PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred -----------------------------hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 11333599999999999999998763
No 11
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.29 E-value=3.2e-06 Score=69.91 Aligned_cols=92 Identities=11% Similarity=-0.006 Sum_probs=57.5
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhC
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVIN 186 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~n 186 (261)
.+.+.|++ ++++..+|....+.. .+....+.....||+.+++..++. ++.++|+++.+.+.-.
T Consensus 91 ~~~~~~~~-~il~~~~p~~~~~~~--------~~~~~~~~~~~~~n~~~~~~a~~~-------~v~~vd~~~~~~~~~~- 153 (183)
T cd04501 91 LAEANGIK-VILASPLPVDDYPWK--------PQWLRPANKLKSLNRWLKDYAREN-------GLLFLDFYSPLLDERN- 153 (183)
T ss_pred HHHHCCCc-EEEEeCCCcCccccc--------hhhcchHHHHHHHHHHHHHHHHHc-------CCCEEechhhhhcccc-
Confidence 45556765 555566654433321 111334566777888777665431 4789999988665211
Q ss_pred CCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 187 PPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 187 P~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
......+..|++||++++|+++|+.+.+.
T Consensus 154 -------------------------------~~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 154 -------------------------------VGLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred -------------------------------ccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 01123455799999999999999998753
No 12
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.20 E-value=8.5e-06 Score=71.23 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=75.6
Q ss_pred eEEEcCCcccccCCCCCccccccCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHhcCCCCCCCcccccCCCCCCCceeec
Q 046708 14 ALYVFGDSLFDSGNNNLLPTIARANYLPYGANFVNKSSTGRFTNGKTVPDFVAEFLGLPYSPPFLKIRDKLPLTGLNYAS 93 (261)
Q Consensus 14 ~l~vFGDSlsDtGn~~~~~~~~~~~~~Pyg~~~~~~~~~gRfSnG~~~~d~la~~lgl~~~~~y~~~~~~~~~~G~NfA~ 93 (261)
++++||||++- |... +++... +.. ...|. ...|++++++.|+.. + ..-.|+|.
T Consensus 2 ~~v~iGDS~~~-G~g~----------~~~~~~-~~~-~c~rs--~~~y~~~la~~l~~~---~---------~~~~n~a~ 54 (259)
T cd01823 2 RYVALGDSYAA-GPGA----------GPLDDG-PDD-GCRRS--SNSYPTLLARALGDE---T---------LSFTDVAC 54 (259)
T ss_pred CEEEecchhhc-CCCC----------CcccCC-CCC-CCccC--CccHHHHHHHHcCCC---C---------ceeeeeee
Confidence 58999999974 3321 111100 111 23444 468999999998854 1 11268999
Q ss_pred cCCCcCCCCC--cc-----chheccCCcEEEEecCC--CCCccCceec----cc----C-CCCcchhhhHHHHHHHHHHH
Q 046708 94 GSCGILPETG--RP-----FRLYNLGARKIVMFEIG--PIGCIPSITR----KN----K-HTGRCVEDKNQLVSYFNNML 155 (261)
Q Consensus 94 ~Ga~~~~~~~--ql-----F~L~~~GAr~~vv~~lp--~lg~~P~~~~----~~----~-~~~~~~~~~~~~~~~~N~~L 155 (261)
+|+++.+... |. -.-....+ ++|++.+. |+...-.... .. . ....+..........|-+.|
T Consensus 55 sGa~~~~~~~~~~~~~~~~~~~l~~~~-dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 133 (259)
T cd01823 55 SGATTTDGIEPQQGGIAPQAGALDPDT-DLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARL 133 (259)
T ss_pred cCcccccccccccCCCchhhcccCCCC-CEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHH
Confidence 9998755431 00 01112223 33333332 3321100000 00 0 00112333445567888899
Q ss_pred HHHHHHhhhhcCCceEEEecchHHHh
Q 046708 156 PTMLQNLTSCLEGSTFVNGHAHWLGY 181 (261)
Q Consensus 156 ~~~l~~l~~~~~g~~i~~~D~y~~~~ 181 (261)
+.+|+++++..|+++|+++-.+.++.
T Consensus 134 ~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 134 KAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred HHHHHHHHhhCCCcEEEEeccccccc
Confidence 99999999988999999888766543
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.15 E-value=2.5e-05 Score=64.53 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=19.0
Q ss_pred EecCCChHHHHHHHHHHHHHc
Q 046708 225 FWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 225 fwD~vHPT~~~h~~iA~~~~~ 245 (261)
+.|++|||+++|+++|+.+..
T Consensus 155 ~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 155 LVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred CCCCCCCCHHHHHHHHHHHhh
Confidence 469999999999999998875
No 14
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.95 E-value=2.2e-05 Score=65.94 Aligned_cols=24 Identities=13% Similarity=0.046 Sum_probs=21.0
Q ss_pred cEEecCCChHHHHHHHHHHHHHcC
Q 046708 223 HYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 223 y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
++..|++||++++|+++|+.+.+.
T Consensus 159 ~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 159 WMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHH
Confidence 455799999999999999998874
No 15
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.80 E-value=7.7e-05 Score=59.45 Aligned_cols=83 Identities=14% Similarity=0.015 Sum_probs=59.7
Q ss_pred cCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCC
Q 046708 111 LGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKY 190 (261)
Q Consensus 111 ~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~y 190 (261)
....+|++++.|+....+. ..+.....+|..+++..++.... ..+.++|++..+...
T Consensus 104 ~~~~~vv~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~------- 160 (187)
T cd00229 104 APGAKVILITPPPPPPREG-------------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE------- 160 (187)
T ss_pred CCCCcEEEEeCCCCCCCch-------------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC-------
Confidence 4667888888887665554 23345567788877776655432 347788888766553
Q ss_pred CCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 191 GLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 191 Gf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
+..+++||++|||+++|+++|+.+++
T Consensus 161 -----------------------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 -----------------------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred -----------------------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 24477899999999999999999875
No 16
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.77 E-value=0.00017 Score=59.74 Aligned_cols=87 Identities=13% Similarity=0.014 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCC----------CCCCcccccccCCccCcCCCC-CCC
Q 046708 149 SYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLV----------DSSNPCCIAWFNGTSGCIPFL-KPC 217 (261)
Q Consensus 149 ~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~----------~~~~aCc~~g~~~~~~C~~~~-~~C 217 (261)
..|-+.|+++++++++..|+.+|++.-....... .+++. ......|.. ++. .+-+.. ..+
T Consensus 89 ~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~------~~~~~~~~~~~~~~~~~~~~~a~~-~~~--~~vD~~~~~~ 159 (188)
T cd01827 89 DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYG------DGGFINDNIIKKEIQPMIDKIAKK-LNL--KLIDLHTPLK 159 (188)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEeCCccccc------CCCccchHHHHHHHHHHHHHHHHH-cCC--cEEEcccccc
Confidence 4566778888888888888888887654322111 11110 000001100 000 000101 111
Q ss_pred CCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 218 SNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 218 ~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
..+ .+.-|++||++++|++||+.+++.
T Consensus 160 ~~~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 160 GKP--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred CCc--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 122 356799999999999999998764
No 17
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.75 E-value=2.2e-05 Score=64.83 Aligned_cols=96 Identities=14% Similarity=-0.063 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCC----CCCCC----CCcccccc--c-C-CccCcCCCCCC
Q 046708 149 SYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKY----GLVDS----SNPCCIAW--F-N-GTSGCIPFLKP 216 (261)
Q Consensus 149 ~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~y----Gf~~~----~~aCc~~g--~-~-~~~~C~~~~~~ 216 (261)
+.|=+.++.+++++++..|+++|+++.........- +..+ .+... .+.|-..+ + + ....|......
T Consensus 77 ~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~v~~vd~~~~~~~~~~~~ 154 (189)
T cd01825 77 SEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTG--AGRWRTPPGLDAVIAAQRRVAKEEGIAFWDLYAAMGGEGGIW 154 (189)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCC--CCCcccCCcHHHHHHHHHHHHHHcCCeEEeHHHHhCCcchhh
Confidence 456677888888888878999999988754432210 0000 01000 01121111 0 0 00111110000
Q ss_pred CCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 217 CSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 217 C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
......++..|++|||+++|+++|+.+.+.
T Consensus 155 ~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 155 QWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred HhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 111234667899999999999999998763
No 18
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.68 E-value=0.00034 Score=57.21 Aligned_cols=23 Identities=22% Similarity=0.053 Sum_probs=20.4
Q ss_pred EEecCCChHHHHHHHHHHHHHcC
Q 046708 224 YFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 224 ~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
++.|++||++++|++||+.+++.
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999998763
No 19
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.64 E-value=0.00017 Score=58.05 Aligned_cols=61 Identities=18% Similarity=0.239 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccE
Q 046708 145 NQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHY 224 (261)
Q Consensus 145 ~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~ 224 (261)
+.....||+.+++.+++.... +..+.++|++..+.. +++
T Consensus 96 ~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~---------------------------------------~~~ 134 (157)
T cd01833 96 NARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT---------------------------------------ADD 134 (157)
T ss_pred hHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC---------------------------------------ccc
Confidence 567789999999999887553 567889998875532 135
Q ss_pred EecCCChHHHHHHHHHHHHHcC
Q 046708 225 FWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 225 fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
.+|++||++++|+.+|+.+++.
T Consensus 135 ~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 135 LYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ccCCCCCchHHHHHHHHHHHhh
Confidence 5899999999999999998864
No 20
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.56 E-value=0.00047 Score=56.69 Aligned_cols=90 Identities=11% Similarity=-0.047 Sum_probs=59.3
Q ss_pred cCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCC
Q 046708 111 LGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKY 190 (261)
Q Consensus 111 ~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~y 190 (261)
....+|++.+.++....+.. ..-....+.....||+.|++..++ + ++.++|+++.+.+....+
T Consensus 102 ~~~~~ii~~~p~~~~~~~~~-------~~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~~~~~--- 164 (191)
T cd01834 102 ESAPRIVLVSPIAYEANEDP-------LPDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEAFQKA--- 164 (191)
T ss_pred cCCCcEEEECCcccCCCCCC-------CCChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHHHHhC---
Confidence 34456777776554322110 001345667778888888776543 2 478999999988743322
Q ss_pred CCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 191 GLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 191 Gf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
+..++++|++||++++|+++|+.+.++
T Consensus 165 -----------------------------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 -----------------------------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred -----------------------------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 133567999999999999999998763
No 21
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.54 E-value=0.00037 Score=56.88 Aligned_cols=24 Identities=13% Similarity=0.009 Sum_probs=20.9
Q ss_pred cEEecCCChHHHHHHHHHHHHHcC
Q 046708 223 HYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 223 y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
++.-|++||++++|+++|+.+.+.
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHHh
Confidence 456799999999999999998764
No 22
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=97.42 E-value=0.00055 Score=55.94 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=55.9
Q ss_pred CCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 112 GARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 112 GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
...++++.++||....+. +....+.....||+.+++..++. ++.++|+++.+.+-.
T Consensus 89 p~~~vi~~~~~p~~~~~~----------~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~~~------- 144 (174)
T cd01841 89 PNTKIYLLSVLPVLEEDE----------IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVDEF------- 144 (174)
T ss_pred CCCEEEEEeeCCcCcccc----------cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcCCC-------
Confidence 356788888887543221 12234556788898888765432 378999999764310
Q ss_pred CCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 192 LVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 192 f~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
+ +..+.+..|++||++++|+++|+.+.+
T Consensus 145 -----------~---------------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 145 -----------G---------------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred -----------C---------------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 0 111245579999999999999998864
No 23
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.37 E-value=0.00055 Score=55.75 Aligned_cols=81 Identities=22% Similarity=0.213 Sum_probs=53.8
Q ss_pred CcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCC
Q 046708 113 ARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGL 192 (261)
Q Consensus 113 Ar~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf 192 (261)
..+|++.++||.+ + . ....+..+..+|+.+++..++ . ++.++|+++.+.+- -|
T Consensus 87 ~~~vi~~~~~p~~--~----~-------~~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~~~------~~- 139 (169)
T cd01828 87 NIKIVVQSILPVG--E----L-------KSIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFTNA------DG- 139 (169)
T ss_pred CCeEEEEecCCcC--c----c-------CcCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhcCC------CC-
Confidence 3468888888755 1 0 123345567889888876552 2 46688998765330 00
Q ss_pred CCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 193 VDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 193 ~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
+..+++.+|++||++++|+++|+.+.+-
T Consensus 140 --------------------------~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 --------------------------DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred --------------------------CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 1133566899999999999999998763
No 24
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.27 E-value=0.001 Score=55.59 Aligned_cols=92 Identities=11% Similarity=-0.102 Sum_probs=54.7
Q ss_pred ccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCC
Q 046708 110 NLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPK 189 (261)
Q Consensus 110 ~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~ 189 (261)
+.|++ +++++.||+.. ...+.....+|..+++..++ + .+.++|+++.+.+
T Consensus 106 ~~~~~-vili~~pp~~~---------------~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~------- 155 (200)
T cd01829 106 AKGVP-VIWVGLPAMRS---------------PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD------- 155 (200)
T ss_pred hCCCc-EEEEcCCCCCC---------------hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC-------
Confidence 44555 77777776531 12234556677777665443 2 3689999987743
Q ss_pred CCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 190 YGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 190 yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
...|+..- ..........++..|++|||+++|+++|+.+.+.
T Consensus 156 ------~~~~~~~~---------~~~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 156 ------ENGRFTYS---------GTDVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred ------CCCCeeee---------ccCCCCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 11222100 0001112334566799999999999999998764
No 25
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=97.10 E-value=0.0012 Score=54.63 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=54.9
Q ss_pred cEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCC
Q 046708 114 RKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLV 193 (261)
Q Consensus 114 r~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~ 193 (261)
.++++++.||........... .........++..+.||+.+++..++. .+.++|+++.+... +.
T Consensus 108 ~~ii~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~~---~~----- 171 (199)
T cd01838 108 TKVILITPPPVDEEAWEKSLE-DGGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQEE---AG----- 171 (199)
T ss_pred CeEEEeCCCCCCHHHHhhhhc-cccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHhc---cC-----
Confidence 457777877754322110000 001123455677788888777655432 37788999877641 10
Q ss_pred CCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 194 DSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 194 ~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
..+.++.|++||++++|+++|+.+.+
T Consensus 172 --------------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 --------------------------WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred --------------------------chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 11234579999999999999999875
No 26
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=96.98 E-value=0.0034 Score=52.64 Aligned_cols=62 Identities=16% Similarity=0.128 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCc
Q 046708 143 DKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQ 222 (261)
Q Consensus 143 ~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~ 222 (261)
..+..++.||+.+++..++. -++.++|+++.+..-- +..
T Consensus 142 ~~~~~~~~~n~~~~~~a~~~------~~v~~vd~~~~~~~~~-----------------------------------~~~ 180 (204)
T cd04506 142 EINDIVNDWNEASQKLASQY------KNAYFVPIFDLFSDGQ-----------------------------------NKY 180 (204)
T ss_pred HHHHHHHHHHHHHHHHHHhC------CCeEEEehHHhhcCCc-----------------------------------ccc
Confidence 45778888998877765422 2488999998775411 122
Q ss_pred cEEecCCChHHHHHHHHHHHHHc
Q 046708 223 HYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 223 y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
.+..|++||++++|++||+.+++
T Consensus 181 ~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 181 LLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred cccccCcCCCHHHHHHHHHHHHh
Confidence 45579999999999999999875
No 27
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=96.88 E-value=0.0023 Score=57.41 Aligned_cols=25 Identities=16% Similarity=0.260 Sum_probs=22.9
Q ss_pred ccEEecCCChHHHHHHHHHHHHHcC
Q 046708 222 QHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 222 ~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
+++-||.+||++++|.++|+.+|..
T Consensus 258 ~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 258 SFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 5778999999999999999999876
No 28
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.88 E-value=0.0026 Score=53.61 Aligned_cols=24 Identities=21% Similarity=0.022 Sum_probs=20.6
Q ss_pred ccEEecCCChHHHHHHHHHHHHHc
Q 046708 222 QHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 222 ~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
+|+.+|++||++++|++||+.+..
T Consensus 179 ~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 179 AYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred ccCCCCCCCCCHHHHHHHHHhcCC
Confidence 466689999999999999998754
No 29
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.84 E-value=0.0019 Score=53.64 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=50.9
Q ss_pred cCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCC
Q 046708 111 LGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKY 190 (261)
Q Consensus 111 ~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~y 190 (261)
.++ +++++++||..... ....+.....+|+.+++..++. .+.++|+++.+.+. +.
T Consensus 110 ~~~-~vi~~~~~p~~~~~------------~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~~---~~-- 164 (193)
T cd01835 110 RLV-PVLVVGPTPVDEAK------------MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLNH---PQ-- 164 (193)
T ss_pred cCC-cEEEEeCCCccccc------------cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhcC---cH--
Confidence 344 47777776653110 1123456677777777665432 36788998876651 10
Q ss_pred CCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 191 GLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 191 Gf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
...+++..|++||++++|++||+.+.+
T Consensus 165 ----------------------------~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 ----------------------------WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ----------------------------HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 001233369999999999999999865
No 30
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=96.83 E-value=0.003 Score=53.75 Aligned_cols=81 Identities=19% Similarity=0.094 Sum_probs=50.1
Q ss_pred cEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCC
Q 046708 114 RKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLV 193 (261)
Q Consensus 114 r~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~ 193 (261)
.+|++++++|....| ..+......+|+.+++.+. + ..++.++|++..+.+ +.
T Consensus 129 ~~Iil~~~~p~~~~~-------------~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~---~~------ 180 (214)
T cd01820 129 AKILLLGLLPRGQNP-------------NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQ---SD------ 180 (214)
T ss_pred CeEEEEeccCCCCCc-------------hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhcc---cC------
Confidence 468888887654321 1233445667777665432 1 225788898876642 00
Q ss_pred CCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 194 DSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 194 ~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
+ ...+.++.|++||++++|+++|+.+.+.
T Consensus 181 -------g-----------------~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 181 -------G-----------------TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred -------C-----------------CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0 1112335799999999999999998763
No 31
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=96.77 E-value=0.0031 Score=50.46 Aligned_cols=83 Identities=17% Similarity=0.090 Sum_probs=52.9
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhC
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVIN 186 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~n 186 (261)
.+...+ +++++.+||..-.+.. .+..........+|+.+++..++. .+.++|+...+.+
T Consensus 97 ~~~~~~--~vi~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~id~~~~~~~---- 155 (179)
T PF13472_consen 97 QLRPHG--PVILVSPPPRGPDPRD--------PKQDYLNRRIDRYNQAIRELAKKY-------GVPFIDLFDAFDD---- 155 (179)
T ss_dssp HHHTTS--EEEEEE-SCSSSSTTT--------THTTCHHHHHHHHHHHHHHHHHHC-------TEEEEEHHHHHBT----
T ss_pred hhcccC--cEEEecCCCccccccc--------ccchhhhhhHHHHHHHHHHHHHHc-------CCEEEECHHHHcc----
Confidence 444455 8888888864433211 113455667777888777655432 5789999998664
Q ss_pred CCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHH
Q 046708 187 PPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLF 239 (261)
Q Consensus 187 P~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~i 239 (261)
+. . ....+++.|.+|||+++|++|
T Consensus 156 ~~---------~--------------------~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 156 HD---------G--------------------WFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp TT---------S--------------------CBHTCTBTTSSSBBHHHHHHH
T ss_pred cc---------c--------------------cchhhcCCCCCCcCHHHhCcC
Confidence 10 0 112356699999999999986
No 32
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.42 E-value=0.0062 Score=50.74 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCcc
Q 046708 144 KNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQH 223 (261)
Q Consensus 144 ~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y 223 (261)
.....+.+|+.+++.+++|+++ .+-+++++|-..++-+ +.-
T Consensus 113 ~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~--------------------------------------d~e 153 (178)
T PF14606_consen 113 RGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD--------------------------------------DHE 153 (178)
T ss_dssp TS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc--------------------------------------ccc
Confidence 3456788999999999999764 4567888876664322 011
Q ss_pred EEecCCChHHHHHHHHHHHHHc
Q 046708 224 YFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 224 ~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
..-|++|||..+|..+|+.+..
T Consensus 154 ~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 154 ATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ----------------------
T ss_pred cccccccccccccccccccccc
Confidence 2369999999999999998754
No 33
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=96.38 E-value=0.0041 Score=52.03 Aligned_cols=69 Identities=6% Similarity=-0.144 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEE
Q 046708 146 QLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYF 225 (261)
Q Consensus 146 ~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~f 225 (261)
.....||+.+++..++. .+.++|+++.+.+..+.-..-+-.. .. .++.
T Consensus 129 ~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~~~~~------------------------~~-~~~~ 176 (198)
T cd01821 129 DTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPEKSKK------------------------YF-PEGP 176 (198)
T ss_pred ccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChHhHHh------------------------hC-cCCC
Confidence 34566777777665543 3678999999877544321100000 00 2445
Q ss_pred ecCCChHHHHHHHHHHHHHcC
Q 046708 226 WDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 226 wD~vHPT~~~h~~iA~~~~~~ 246 (261)
.|++||++++|++||+.+++.
T Consensus 177 ~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 177 GDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred CCCCCCCHHHHHHHHHHHHhh
Confidence 799999999999999998763
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=96.34 E-value=0.0061 Score=48.95 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=20.0
Q ss_pred cEEecCCChHHHHHHHHHHHHHc
Q 046708 223 HYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 223 y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
++..|++||++++|+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 44469999999999999999875
No 35
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=96.20 E-value=0.013 Score=52.75 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=21.8
Q ss_pred CCccEE-ecCCChHHHHHHHHHHHHHc
Q 046708 220 ANQHYF-WDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 220 p~~y~f-wD~vHPT~~~h~~iA~~~~~ 245 (261)
+-+++. -|++||++.+|.++|+.+|.
T Consensus 278 ~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 278 TWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred chhhcccccCCCccHHHHHHHHHHhhc
Confidence 344555 79999999999999999885
No 36
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.08 E-value=0.02 Score=46.52 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceEEEecchHHHh-hhhhCCCCCCCCCC-CCccccc-c--c-CCccCcCCCCCCCCCC-
Q 046708 148 VSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGY-DAVINPPKYGLVDS-SNPCCIA-W--F-NGTSGCIPFLKPCSNA- 220 (261)
Q Consensus 148 ~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~-~ii~nP~~yGf~~~-~~aCc~~-g--~-~~~~~C~~~~~~C~~p- 220 (261)
.+.|=+.++++++++++..|++++++........ .... +..--+... .+-|-.. + + +. .......+.++
T Consensus 69 ~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~~~~~~~~-~~~~~~n~~~~~~a~~~~~v~~vD~---~~~~~~~~~~~~ 144 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKLPDTPIAIISIKPSPARWALR-PKIRRFNALLKELAETRPNLTYIDV---ASPMLDADGKPR 144 (171)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCCCcchhhH-HHHHHHHHHHHHHHhcCCCeEEEEC---cHHHhCCCCCcC
Confidence 4557778888888888888888888876311000 0000 000000000 0001100 0 0 00 00000112222
Q ss_pred CccEEecCCChHHHHHHHHHHHHHc
Q 046708 221 NQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 221 ~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
.+++..|++||++++|+++|+.+.+
T Consensus 145 ~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 145 AELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred hhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 3566789999999999999998865
No 37
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=95.40 E-value=0.014 Score=49.78 Aligned_cols=93 Identities=10% Similarity=0.068 Sum_probs=65.4
Q ss_pred CcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCC
Q 046708 113 ARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGL 192 (261)
Q Consensus 113 Ar~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf 192 (261)
-.+|++.+-||+...-..+........-.++.|+.+..|++.+.+..+++ ++..+|+.+.+++.
T Consensus 115 ~~riIlitPpp~de~~~~~~~~e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~--------- 178 (245)
T KOG3035|consen 115 ETRIILITPPPVDEEAWEKQEQEPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQES--------- 178 (245)
T ss_pred cceEEEecCCCcCHHHHHHHhccchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhc---------
Confidence 45788888888776544433311011123468999999999998887765 46688888887761
Q ss_pred CCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHcC
Q 046708 193 VDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 193 ~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
.|-.+-.|||++|.|.++++++.+++++-
T Consensus 179 -------------------------~dw~~~~ltDGLHlS~~G~~ivf~Ei~kv 207 (245)
T KOG3035|consen 179 -------------------------DDWQTSCLTDGLHLSPKGNKIVFDEILKV 207 (245)
T ss_pred -------------------------ccHHHHHhccceeeccccchhhHHHHHHH
Confidence 12233457999999999999999999873
No 38
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=90.69 E-value=1.7 Score=40.48 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=26.5
Q ss_pred CCccEEecCCChHHHHHHHHHHHHHcCCCCcCCC
Q 046708 220 ANQHYFWDAYHLTEAMYSLFASHCINDKSFCEPF 253 (261)
Q Consensus 220 p~~y~fwD~vHPT~~~h~~iA~~~~~~~~~~~P~ 253 (261)
+..++--|-.|.++++|.++|+++|.. +..|+
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNn--l~epv 354 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNN--LFEPV 354 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHH--hhcCC
Confidence 345677899999999999999999998 45554
No 39
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=84.10 E-value=3.4 Score=33.69 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCCceEEEecch
Q 046708 148 VSYFNNMLPTMLQNLTSCLEGSTFVNGHAH 177 (261)
Q Consensus 148 ~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y 177 (261)
.+.|=+.++.+++++++.+|+++++++-..
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~~ii~~t~~ 116 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKTKVILITPP 116 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 355667789999999988899999998653
No 40
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=81.43 E-value=0.95 Score=38.01 Aligned_cols=25 Identities=16% Similarity=0.070 Sum_probs=21.4
Q ss_pred ccEEecCCChHHHHHHHHHHHHHcC
Q 046708 222 QHYFWDAYHLTEAMYSLFASHCIND 246 (261)
Q Consensus 222 ~y~fwD~vHPT~~~h~~iA~~~~~~ 246 (261)
.+..+|++||+.++|+.+|+.+.+.
T Consensus 183 ~~~~~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 183 ELLTEDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred ccccCCCCCcCHhhHHHHHHHHHHH
Confidence 3444999999999999999998865
No 41
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.19 E-value=6.6 Score=35.80 Aligned_cols=95 Identities=13% Similarity=-0.006 Sum_probs=59.1
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhC
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVIN 186 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~n 186 (261)
.+...---+++.+++|+. + .+.+|+-...+|...++.++++..+ ++|+++.+-+.-.+
T Consensus 220 ~ia~~~~~~V~WvGmP~~------r---------~~~l~~dm~~ln~iy~~~vE~~~gk-------~i~i~d~~v~e~G~ 277 (354)
T COG2845 220 KIAHTHKVPVLWVGMPPF------R---------KKKLNADMVYLNKIYSKAVEKLGGK-------FIDIWDGFVDEGGK 277 (354)
T ss_pred HHhcccCCcEEEeeCCCc------c---------ccccchHHHHHHHHHHHHHHHhCCe-------EEEecccccccCCc
Confidence 334444456788888752 2 3567788899999999988877543 45665544332111
Q ss_pred -CCCCCCCCCCCcccccccCCccCcCCCCCCCCCCCccEEecCCChHHHHHHHHHHHHHc
Q 046708 187 -PPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNANQHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 187 -P~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
-..+|+.. | ..+-++--=|++|.|.++.+.+|.++.+
T Consensus 278 ~f~~~~~D~----------N------------Gq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 278 DFVTTGVDI----------N------------GQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred eeEEecccc----------C------------CceEEEeccCCceechhhHHHHHHHHHH
Confidence 11111111 1 1233455569999999999999998864
No 42
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=65.32 E-value=17 Score=25.81 Aligned_cols=65 Identities=8% Similarity=-0.014 Sum_probs=33.8
Q ss_pred cCCcEEEEecCCCCCccCceecccCCCCcchhhhHHH---HHHHHHHHHHHHHHhhhhcCCceE-EEec
Q 046708 111 LGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQL---VSYFNNMLPTMLQNLTSCLEGSTF-VNGH 175 (261)
Q Consensus 111 ~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~---~~~~N~~L~~~l~~l~~~~~g~~i-~~~D 175 (261)
-|||.|||+.++=..-.|..........+.+..+..- -...-++|+++++.|+++.++.+. +++|
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 5899999998874431111111111122333333332 233336777777777777777543 3344
No 43
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=59.63 E-value=6.7 Score=32.76 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=18.5
Q ss_pred ecCCChHHHHHHHHHHHHHc
Q 046708 226 WDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 226 wD~vHPT~~~h~~iA~~~~~ 245 (261)
.|+||..+++|+.+++.+++
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 69999999999999998875
No 44
>PLN02757 sirohydrochlorine ferrochelatase
Probab=43.96 E-value=34 Score=27.71 Aligned_cols=57 Identities=18% Similarity=0.275 Sum_probs=39.3
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec---chHHHhhh
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH---AHWLGYDA 183 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D---~y~~~~~i 183 (261)
+|.+.|+|+|+| +|.+..... .....+.+.++++++++|+.+|.+.. .+..+.++
T Consensus 66 ~l~~~g~~~vvV--------vP~FL~~G~--------------H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~p~l~~l 123 (154)
T PLN02757 66 RCVEQGASRVIV--------SPFFLSPGR--------------HWQEDIPALTAEAAKEHPGVKYLVTAPIGLHELMVDV 123 (154)
T ss_pred HHHHCCCCEEEE--------EEhhhcCCc--------------chHhHHHHHHHHHHHHCCCcEEEECCCCCCCHHHHHH
Confidence 566789999998 577765421 12455788888899999999988753 34455555
Q ss_pred hh
Q 046708 184 VI 185 (261)
Q Consensus 184 i~ 185 (261)
+.
T Consensus 124 l~ 125 (154)
T PLN02757 124 VN 125 (154)
T ss_pred HH
Confidence 44
No 45
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.70 E-value=9.8 Score=33.21 Aligned_cols=25 Identities=28% Similarity=0.130 Sum_probs=17.4
Q ss_pred cccccccCCCCCeEEEcCCcccccCC
Q 046708 2 ERKISSATQLAPALYVFGDSLFDSGN 27 (261)
Q Consensus 2 ~~~~~~~~~~~~~l~vFGDSlsDtGn 27 (261)
|..-......+++++| |||.+|.--
T Consensus 197 e~~~ele~~d~sa~~V-GDSItDv~m 221 (315)
T COG4030 197 EGYCELEGIDFSAVVV-GDSITDVKM 221 (315)
T ss_pred HHHHhhcCCCcceeEe-cCcccchHH
Confidence 4444556778886555 999999754
No 46
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=43.27 E-value=43 Score=30.39 Aligned_cols=52 Identities=15% Similarity=0.286 Sum_probs=34.7
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
++.++|.+.|++|++|.. +...+ .+..+. |.-+++.+..+++++|+.- ++.|
T Consensus 59 ~~~~~Gi~~v~LFgv~~~------Kd~~g-----s~A~~~-----~g~v~~air~iK~~~p~l~-vi~D 110 (314)
T cd00384 59 ELADLGIRAVILFGIPEH------KDEIG-----SEAYDP-----DGIVQRAIRAIKEAVPELV-VITD 110 (314)
T ss_pred HHHHCCCCEEEEECCCCC------CCCCc-----ccccCC-----CChHHHHHHHHHHhCCCcE-EEEe
Confidence 899999999999999642 22211 122222 5667888888898888763 3434
No 47
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=42.51 E-value=43 Score=30.53 Aligned_cols=52 Identities=23% Similarity=0.381 Sum_probs=35.6
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
.+.++|.+.|++|++|+. +... ..+..+. |.-+++.+..+++.+|+.- ++.|
T Consensus 69 ~~~~~Gi~~v~lFgv~~~------Kd~~-----gs~A~~~-----~g~v~~air~iK~~~pdl~-vi~D 120 (322)
T PRK13384 69 RLYALGIRYVMPFGISHH------KDAK-----GSDTWDD-----NGLLARMVRTIKAAVPEMM-VIPD 120 (322)
T ss_pred HHHHcCCCEEEEeCCCCC------CCCC-----cccccCC-----CChHHHHHHHHHHHCCCeE-EEee
Confidence 899999999999999641 2221 1222222 6778888899999999864 4434
No 48
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=42.40 E-value=28 Score=31.71 Aligned_cols=55 Identities=16% Similarity=0.334 Sum_probs=35.1
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecc
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHA 176 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~ 176 (261)
.+.++|.+.|++|++.+ |..+...+ .+..+. |.-+++.+..+++.+|++ +++.|+
T Consensus 65 ~~~~~GI~~v~lFgvi~----~~~Kd~~g-----s~a~~~-----~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 65 EAVDLGIRAVILFGVID----PSKKDEEG-----SEAYNP-----DGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp HHHHTT--EEEEEEE-S----CSC-BSS------GGGGST-----TSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred HHHHCCCCEEEEEeeCC----cccCCcch-----hcccCC-----CChHHHHHHHHHHhCCCc-EEEEec
Confidence 89999999999999843 44443321 223333 677888899999999986 444443
No 49
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=40.77 E-value=48 Score=26.06 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=23.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhc
Q 046708 141 VEDKNQLVSYFNNMLPTMLQNLTSCL 166 (261)
Q Consensus 141 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 166 (261)
.+..+++++.||+.|++.|+++.+++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56778899999999999999999876
No 50
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=39.76 E-value=38 Score=29.79 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=37.0
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhh
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYD 182 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ 182 (261)
.|.+..-+-=+|+++.| +|..++... .-.-..|..++ +.|+.++.+|.++++ ++.||-.|.++.+
T Consensus 160 ~l~~~nP~~kiilTVSP---Vrl~~T~~~---~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d 224 (251)
T PF08885_consen 160 LLRSINPDIKIILTVSP---VRLIATFRD---RDGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMD 224 (251)
T ss_pred HHHhhCCCceEEEEecc---chhhccccc---ccchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccC
Confidence 34444444335666666 455443321 12233344443 357777888877554 5778888888776
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=39.64 E-value=48 Score=30.23 Aligned_cols=52 Identities=12% Similarity=0.255 Sum_probs=35.1
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
++.++|.+.|++|++|. .+... ..+..+. |.-+.+.++.+++++|+.- ++.|
T Consensus 67 ~~~~~Gi~av~LFgv~~------~Kd~~-----gs~A~~~-----~g~v~rair~iK~~~p~l~-vi~D 118 (323)
T PRK09283 67 EAVELGIPAVALFGVPE------LKDED-----GSEAYNP-----DGLVQRAIRAIKKAFPELG-VITD 118 (323)
T ss_pred HHHHCCCCEEEEeCcCC------CCCcc-----cccccCC-----CCHHHHHHHHHHHhCCCcE-EEEe
Confidence 89999999999999843 22221 1222222 5677888888999888863 4444
No 52
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=39.04 E-value=38 Score=24.83 Aligned_cols=48 Identities=23% Similarity=0.252 Sum_probs=32.9
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecc
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHA 176 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~ 176 (261)
+|.+.|+++|+|+ |.+.... ......+.+.+++++.++|+++|.+...
T Consensus 45 ~l~~~g~~~ivvv--------P~fL~~G--------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 45 RLVAQGARRIVVV--------PYFLFPG--------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HHHCCTCSEEEEE--------EESSSSS--------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHcCCCeEEEE--------eeeecCc--------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 7778899999884 6666441 1122347778888999999999888554
No 53
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=38.29 E-value=53 Score=29.91 Aligned_cols=54 Identities=7% Similarity=0.068 Sum_probs=35.1
Q ss_pred hheccCCcEEEEecCCCCC-ccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIG-CIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg-~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
++.++|.+.|++|++|+-. +-+.. ..+..+. |.-+++.++.+++++|+.- ++.|
T Consensus 59 ~~~~~Gi~~v~LFgv~~~~~Kd~~~---------gs~a~~~-----~g~v~~air~iK~~~pdl~-vi~D 113 (320)
T cd04824 59 PLVAKGLRSVILFGVPLKPGKDDRS---------GSAADDE-----DGPVIQAIKLIREEFPELL-IACD 113 (320)
T ss_pred HHHHCCCCEEEEeCCCccccCCcCc---------cccccCC-----CChHHHHHHHHHHhCCCcE-EEEe
Confidence 8999999999999997421 22220 1112222 5677888888888888763 4434
No 54
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=38.04 E-value=51 Score=28.34 Aligned_cols=52 Identities=21% Similarity=0.111 Sum_probs=37.0
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhh
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAV 184 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii 184 (261)
.|...|.|+|+++|-. ++ ....|+..+++|++++++.++.++|.+.+.....
T Consensus 94 sl~~~Gf~~ivivngH---------------gG-----------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 94 SLARHGFRRIVIVNGH---------------GG-----------NIAALEAAARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp HHHHHT--EEEEEESS---------------TT-----------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred HHHHcCCCEEEEEECC---------------Hh-----------HHHHHHHHHHHHHhhCCCcEEEEeechhccchhh
Confidence 8899999999998843 12 1235677778888878999999999998876543
No 55
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=37.15 E-value=54 Score=29.89 Aligned_cols=54 Identities=15% Similarity=0.339 Sum_probs=35.1
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
.+.++|.+.|++|+++| |..+...+ .+..+. |.-+++.+..+++++|+. +++.|
T Consensus 62 ~~~~~Gi~~v~lFgv~~----~~~KD~~g-----s~A~~~-----~g~v~~air~iK~~~p~l-~vi~D 115 (320)
T cd04823 62 EAVDLGIPAVALFPVTP----PELKSEDG-----SEAYNP-----DNLVCRAIRAIKEAFPEL-GIITD 115 (320)
T ss_pred HHHHcCCCEEEEecCCC----cccCCccc-----ccccCC-----CChHHHHHHHHHHhCCCc-EEEEe
Confidence 89999999999999853 22122211 122222 567788888899888886 34444
No 56
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=33.08 E-value=57 Score=23.73 Aligned_cols=47 Identities=19% Similarity=0.241 Sum_probs=32.4
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
+|.+.|+++++| .|.+..... .....+...+++++.++++.++.+.+
T Consensus 52 ~l~~~g~~~v~v--------vPlfl~~G~--------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 52 ELAAQGATRIVV--------VPLFLLAGG--------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHcCCCEEEE--------EeeEeCCCc--------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 677889999988 476665421 12345666677777788998888754
No 57
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=32.18 E-value=80 Score=24.29 Aligned_cols=26 Identities=23% Similarity=0.302 Sum_probs=23.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhc
Q 046708 141 VEDKNQLVSYFNNMLPTMLQNLTSCL 166 (261)
Q Consensus 141 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 166 (261)
.+..++++..||+.|.+.|+++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56678899999999999999999876
No 58
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=30.98 E-value=83 Score=26.87 Aligned_cols=78 Identities=12% Similarity=-0.009 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCCCCCCCCcccccccCCccCcCCCCCCCCCCC
Q 046708 142 EDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYGLVDSSNPCCIAWFNGTSGCIPFLKPCSNAN 221 (261)
Q Consensus 142 ~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCc~~g~~~~~~C~~~~~~C~~p~ 221 (261)
+..++....+|+.+++..++ +...++.++|++..|.. ...|.... .+.. . .+..
T Consensus 181 ~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~-------------~~~~~~~~-----~~~~-~---~~~~ 234 (259)
T cd01823 181 PELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG-------------HRACSPDP-----WSRS-V---LDLL 234 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC-------------CccccCCC-----cccc-c---cCCC
Confidence 44566667777766665544 33356889999987764 12232110 0000 0 0122
Q ss_pred ccEEecCCChHHHHHHHHHHHHHc
Q 046708 222 QHYFWDAYHLTEAMYSLFASHCIN 245 (261)
Q Consensus 222 ~y~fwD~vHPT~~~h~~iA~~~~~ 245 (261)
..+.-|.+||++++|+.||+.+.+
T Consensus 235 ~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 235 PTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCCCccCCCCCHHHHHHHHHHHhh
Confidence 334579999999999999999875
No 59
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=29.84 E-value=1.3e+02 Score=26.99 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=34.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhcC---C-ceEEEecchHHHhhhhhCCCCCCCCCC
Q 046708 141 VEDKNQLVSYFNNMLPTMLQNLTSCLE---G-STFVNGHAHWLGYDAVINPPKYGLVDS 195 (261)
Q Consensus 141 ~~~~~~~~~~~N~~L~~~l~~l~~~~~---g-~~i~~~D~y~~~~~ii~nP~~yGf~~~ 195 (261)
...+.+-.+.||.+|...=.++..+.. | -=|++-|.|.+|++ .||.+.+
T Consensus 179 ~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 179 AAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 344555677888888877777766553 2 24788899999998 6777654
No 60
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=29.67 E-value=61 Score=29.45 Aligned_cols=54 Identities=13% Similarity=0.267 Sum_probs=34.8
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEec
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGH 175 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 175 (261)
.+.++|.+.|++|++|+ +..+...+ ...++. |.-+++.++.+++.+|+. +++.|
T Consensus 69 ~~~~lGi~av~LFgvp~----~~~Kd~~g-----s~A~~~-----~givqravr~ik~~~p~l-~iitD 122 (330)
T COG0113 69 ELVDLGIPAVILFGVPD----DSKKDETG-----SEAYDP-----DGIVQRAVRAIKEAFPEL-VVITD 122 (330)
T ss_pred HHHhcCCCEEEEeCCCc----ccccCccc-----ccccCC-----CChHHHHHHHHHHhCCCe-EEEee
Confidence 89999999999999986 23333221 111111 556778888888888854 33333
No 61
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=29.11 E-value=27 Score=27.82 Aligned_cols=22 Identities=32% Similarity=0.546 Sum_probs=16.5
Q ss_pred ccCCcEEEEecCCCCCc-cCcee
Q 046708 110 NLGARKIVMFEIGPIGC-IPSIT 131 (261)
Q Consensus 110 ~~GAr~~vv~~lp~lg~-~P~~~ 131 (261)
..|||+||++|+|.+.. .|.+.
T Consensus 42 ~~GARdFVfwNipQiQykNP~VQ 64 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQYKNPKVQ 64 (169)
T ss_pred ccCccceEEecchhhcccCCceE
Confidence 35999999999998654 45443
No 62
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=27.96 E-value=35 Score=26.91 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.4
Q ss_pred CCccEEecCCChHHHHHHHHHHHHH
Q 046708 220 ANQHYFWDAYHLTEAMYSLFASHCI 244 (261)
Q Consensus 220 p~~y~fwD~vHPT~~~h~~iA~~~~ 244 (261)
-+.|++-|.+||..+|+-.+-+.|.
T Consensus 100 y~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 100 YEPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp TSTTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCCceeeecccCchhhHHHHHHHHH
Confidence 3668999999999999988887765
No 63
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=27.48 E-value=81 Score=29.13 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++...++.++||++++-..-+..+...++.+|.+|.
T Consensus 196 lf~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 196 LWQRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred HHHHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 34555667788899998888888888899999999997
No 64
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=26.30 E-value=88 Score=29.00 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=31.2
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++..+++.++||++++-..=+..+.+.++.+|.+|.
T Consensus 199 lf~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~fD 236 (352)
T TIGR02089 199 FWDEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETFD 236 (352)
T ss_pred HHHHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhCc
Confidence 34455566778899998888888889999999999986
No 65
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=25.60 E-value=27 Score=29.10 Aligned_cols=16 Identities=31% Similarity=0.339 Sum_probs=13.2
Q ss_pred CCeEEEcCCcccccCC
Q 046708 12 APALYVFGDSLFDSGN 27 (261)
Q Consensus 12 ~~~l~vFGDSlsDtGn 27 (261)
...+++||||.+|.-=
T Consensus 202 ~~~~~~~GD~~ND~~M 217 (254)
T PF08282_consen 202 PEDIIAFGDSENDIEM 217 (254)
T ss_dssp GGGEEEEESSGGGHHH
T ss_pred cceeEEeecccccHhH
Confidence 4679999999999754
No 66
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=25.15 E-value=61 Score=28.96 Aligned_cols=55 Identities=15% Similarity=0.269 Sum_probs=35.9
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecc
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHA 176 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~ 176 (261)
.|.+.|.|.++++++++ |..+...++ +..+. |.-+-..+..|+..+|+. +++.|+
T Consensus 77 plv~~Gl~sViLfgvv~----~~~Kd~~gs-----~Ads~-----~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 77 PLVAKGLRSVILFGVVP----EALKDPTGS-----EADSD-----NGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred HHHHhccceEEEecCCC----ccccCcccc-----cccCC-----CCcHHHHHHHHHHhCcce-EEEeee
Confidence 78999999999999974 444433211 11111 555667788888899987 444443
No 67
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=24.37 E-value=1.2e+02 Score=28.35 Aligned_cols=38 Identities=8% Similarity=0.109 Sum_probs=31.8
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++.+.++.++||++++-..=+.++...++.+|..|.
T Consensus 204 lf~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~fD 241 (360)
T PLN00123 204 LFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFD 241 (360)
T ss_pred HHHHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccCc
Confidence 34555667778899999988888899999999999996
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=24.08 E-value=40 Score=29.44 Aligned_cols=18 Identities=22% Similarity=0.154 Sum_probs=14.6
Q ss_pred CCCeEEEcCCcccccCCC
Q 046708 11 LAPALYVFGDSLFDSGNN 28 (261)
Q Consensus 11 ~~~~l~vFGDSlsDtGn~ 28 (261)
....+++||||..|.-=.
T Consensus 205 ~~~~viafGDs~NDi~Ml 222 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPLL 222 (271)
T ss_pred CCceEEEEcCCHHHHHHH
Confidence 457899999999997544
No 69
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=24.04 E-value=1.3e+02 Score=27.71 Aligned_cols=39 Identities=10% Similarity=0.136 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 153 NMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 153 ~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
...++.++++.++||++++-..=+.++...++.+|..|.
T Consensus 180 glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 180 GLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred HHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 445556667777899998888888899999999999985
No 70
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=23.06 E-value=28 Score=23.43 Aligned_cols=8 Identities=38% Similarity=1.198 Sum_probs=6.6
Q ss_pred EecCCChH
Q 046708 225 FWDAYHLT 232 (261)
Q Consensus 225 fwD~vHPT 232 (261)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 58999985
No 71
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=22.96 E-value=45 Score=28.75 Aligned_cols=18 Identities=28% Similarity=0.054 Sum_probs=15.4
Q ss_pred CCeEEEcCCcccccCCCC
Q 046708 12 APALYVFGDSLFDSGNNN 29 (261)
Q Consensus 12 ~~~l~vFGDSlsDtGn~~ 29 (261)
...+++||||.+|..=..
T Consensus 194 ~~~~~a~GD~~ND~~Ml~ 211 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLE 211 (256)
T ss_pred CceEEEEcCCHhhHHHHH
Confidence 678999999999987654
No 72
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=22.69 E-value=1.3e+02 Score=28.06 Aligned_cols=39 Identities=8% Similarity=0.125 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 153 NMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 153 ~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
...++...++.++||++++-..=+..+...++.+|..|.
T Consensus 199 glf~~~~~eva~eyp~i~~~~~~vDa~~~~lv~~P~~fD 237 (358)
T PRK00772 199 RLWREVVTEVAKEYPDVELSHMYVDNAAMQLVRNPKQFD 237 (358)
T ss_pred hHHHHHHHHHHhHCCCceEEEEeHHHHHHHHhhCcccCe
Confidence 444566667778899998888888899999999999985
No 73
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.56 E-value=81 Score=29.68 Aligned_cols=47 Identities=17% Similarity=0.363 Sum_probs=32.9
Q ss_pred hheccCCcEEEEecCCCCCccCceecccCCCCcchhhhHHHHHHHHHHHHHHHHHhhhhcCCceEEEecch
Q 046708 107 RLYNLGARKIVMFEIGPIGCIPSITRKNKHTGRCVEDKNQLVSYFNNMLPTMLQNLTSCLEGSTFVNGHAH 177 (261)
Q Consensus 107 ~L~~~GAr~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~y 177 (261)
.+++.|+.+++-+ -|.||.|.-... +.++.+|++++|++.++-+|..
T Consensus 327 e~i~~g~~nvIcl--qPFGCmPnhI~~----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVICL--QPFGCMPNHIVS----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceEEe--cCccCCcHHHHH----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 7888898888764 599999932221 4456677777788777776654
No 74
>PF11691 DUF3288: Protein of unknown function (DUF3288); InterPro: IPR021705 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=22.24 E-value=71 Score=23.53 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=27.4
Q ss_pred cCCChHHHHHHHHHHHHHcCCCCcCCCChHHhhc
Q 046708 227 DAYHLTEAMYSLFASHCINDKSFCEPFNLKELVK 260 (261)
Q Consensus 227 D~vHPT~~~h~~iA~~~~~~~~~~~P~~~~~l~~ 260 (261)
|-.||-.+.-+.+-+.++.+. ..+.|+.+|+.
T Consensus 2 dQ~HP~~~~DR~~vd~Ll~~~--p~d~~L~eLAR 33 (90)
T PF11691_consen 2 DQQHPQYKTDREIVDRLLAGE--PTDYNLAELAR 33 (90)
T ss_pred CccCcchhhhHHHHHHHHcCC--CCchhHHHHHH
Confidence 567999999999999999986 66788988875
No 75
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=22.17 E-value=1.4e+02 Score=27.56 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++...++.++||++++-..=+.++...++.+|.+|.
T Consensus 183 lf~~~~~eva~~yP~V~~~~~~vDa~~~~lv~~P~~fd 220 (334)
T PRK08997 183 LFLKVAREVALRYPDIEFEEMIVDATCMQLVMNPEQFD 220 (334)
T ss_pred HHHHHHHHHHhhCCCeEEEeeeHHHHHHHHhhCcccCc
Confidence 34455566677899988876666777789999999986
No 76
>TIGR00169 leuB 3-isopropylmalate dehydrogenase. This model will not find all isopropylmalate dehydrogenases; the enzyme from Sulfolobus sp. strain 7 is more similar to mitochondrial NAD-dependent isocitrate dehydrogenases than to other known isopropylmalate dehydrogenases and was omitted to improve the specificity of the model. It scores below the cutoff and below some enzymes known not to be isopropylmalate dehydrogenase.
Probab=21.30 E-value=1.4e+02 Score=27.67 Aligned_cols=38 Identities=5% Similarity=0.121 Sum_probs=31.1
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++..++..++||++++-..=+..+...++.+|..|.
T Consensus 197 lf~~~~~eva~~yP~I~~~~~~vDa~~~~Lv~~P~~fD 234 (349)
T TIGR00169 197 LWRKTVEEIAKEYPDVELEHQYIDNAAMQLVKSPTQFD 234 (349)
T ss_pred HHHHHHHHHHhhCCCceEEeeeHHHHHHHHHhCccCce
Confidence 44556667778899998888888888899999999985
No 77
>PRK08194 tartrate dehydrogenase; Provisional
Probab=21.27 E-value=1.1e+02 Score=28.32 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=31.1
Q ss_pred HHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 154 MLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 154 ~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
..++.+.++.++||++++-..-+..+...++.||.+|.
T Consensus 196 lf~~~~~eva~~yp~V~~~~~~vDa~~~~Lv~~P~~fD 233 (352)
T PRK08194 196 FWDEVFQEVGKDYPEIETDSQHIDALAAFFVTRPEEFD 233 (352)
T ss_pred HHHHHHHHHHhhCCCceeeehhHHHHHHHHhhChhhCc
Confidence 33455566778899998888888888899999999987
No 78
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=21.01 E-value=1.6e+02 Score=27.58 Aligned_cols=39 Identities=8% Similarity=0.024 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhhcCCceEEEecchHHHhhhhhCCCCCC
Q 046708 153 NMLPTMLQNLTSCLEGSTFVNGHAHWLGYDAVINPPKYG 191 (261)
Q Consensus 153 ~~L~~~l~~l~~~~~g~~i~~~D~y~~~~~ii~nP~~yG 191 (261)
...++.++++.++||++++-..=+.++...++.+|.+|.
T Consensus 219 glf~e~~~eva~eyPdI~~~~~~VDa~a~~Lv~~P~~fD 257 (372)
T PLN00118 219 GLFLKCCREVAEKYPEIVYEEVIIDNCCMMLVKNPALFD 257 (372)
T ss_pred HHHHHHHHHHHhhCCCceEEeeeHHHHHHHhccCcccCc
Confidence 345566677788899988877777788899999999985
No 79
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=20.68 E-value=1.5e+02 Score=19.94 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=19.7
Q ss_pred eEEEecchHHHhhhh--hCCCCCCCCCC
Q 046708 170 TFVNGHAHWLGYDAV--INPPKYGLVDS 195 (261)
Q Consensus 170 ~i~~~D~y~~~~~ii--~nP~~yGf~~~ 195 (261)
.+.+-++...+.... =+|..|||...
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l 50 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSL 50 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcH
Confidence 677888888888877 46899999864
Done!