Query 046710
Match_columns 227
No_of_seqs 110 out of 1210
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 03:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046710.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046710hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 7.1E-40 1.5E-44 251.3 23.3 213 4-217 9-225 (231)
2 PRK09481 sspA stringent starva 100.0 2.6E-39 5.7E-44 252.8 21.3 196 4-206 10-205 (211)
3 PLN02473 glutathione S-transfe 100.0 5.1E-36 1.1E-40 234.8 18.5 194 1-202 1-210 (214)
4 PRK15113 glutathione S-transfe 100.0 3.1E-35 6.6E-40 230.3 18.1 193 1-205 1-210 (214)
5 PLN02395 glutathione S-transfe 100.0 1.5E-34 3.2E-39 226.7 18.1 194 1-203 1-210 (215)
6 PRK10542 glutathionine S-trans 100.0 1E-34 2.3E-39 225.2 15.8 189 5-203 1-197 (201)
7 PRK13972 GSH-dependent disulfi 100.0 2E-34 4.4E-39 225.9 16.7 186 5-202 2-204 (215)
8 PRK10357 putative glutathione 100.0 1E-33 2.2E-38 219.9 19.8 192 5-203 1-200 (202)
9 TIGR01262 maiA maleylacetoacet 100.0 6.7E-34 1.5E-38 222.1 18.5 190 6-204 1-205 (210)
10 KOG0868 Glutathione S-transfer 100.0 5.7E-34 1.2E-38 206.3 14.6 193 3-204 4-208 (217)
11 COG0625 Gst Glutathione S-tran 100.0 2.3E-33 5.1E-38 219.2 19.4 185 5-198 1-199 (211)
12 TIGR00862 O-ClC intracellular 100.0 1.1E-32 2.3E-37 216.6 21.9 193 10-214 16-231 (236)
13 PRK11752 putative S-transferas 100.0 1.2E-32 2.6E-37 221.7 18.9 196 4-205 44-260 (264)
14 PTZ00057 glutathione s-transfe 100.0 1.8E-32 4E-37 213.2 16.6 191 1-205 1-201 (205)
15 PLN02378 glutathione S-transfe 100.0 1.4E-31 3E-36 209.4 21.0 187 10-210 17-206 (213)
16 PLN02817 glutathione dehydroge 100.0 4.1E-31 9E-36 211.9 21.2 188 11-212 71-260 (265)
17 KOG0867 Glutathione S-transfer 100.0 5.9E-31 1.3E-35 206.9 17.8 197 4-206 2-212 (226)
18 PRK10387 glutaredoxin 2; Provi 100.0 2.2E-30 4.8E-35 202.2 15.1 179 5-198 1-208 (210)
19 KOG1695 Glutathione S-transfer 100.0 2.2E-29 4.7E-34 192.3 16.5 194 1-205 1-202 (206)
20 TIGR02182 GRXB Glutaredoxin, G 100.0 1E-27 2.2E-32 187.0 15.6 177 6-198 1-207 (209)
21 KOG4420 Uncharacterized conser 99.9 8.7E-25 1.9E-29 167.5 12.9 202 4-209 26-293 (325)
22 KOG1422 Intracellular Cl- chan 99.9 6.8E-23 1.5E-27 152.9 16.6 194 11-214 19-216 (221)
23 PLN02907 glutamate-tRNA ligase 99.9 4E-23 8.6E-28 184.5 16.1 158 1-196 1-159 (722)
24 PF13417 GST_N_3: Glutathione 99.8 3E-20 6.5E-25 121.3 8.6 74 7-81 1-74 (75)
25 cd03059 GST_N_SspA GST_N famil 99.8 3E-19 6.4E-24 116.0 8.8 73 5-78 1-73 (73)
26 cd03058 GST_N_Tau GST_N family 99.8 4.2E-19 9.1E-24 115.6 8.6 73 5-78 1-74 (74)
27 cd03052 GST_N_GDAP1 GST_N fami 99.8 4E-19 8.6E-24 115.2 8.0 70 5-75 1-73 (73)
28 cd03061 GST_N_CLIC GST_N famil 99.8 6.7E-19 1.4E-23 117.6 8.2 70 11-81 20-89 (91)
29 cd03076 GST_N_Pi GST_N family, 99.8 6.1E-19 1.3E-23 114.5 6.9 73 4-77 1-73 (73)
30 cd03041 GST_N_2GST_N GST_N fam 99.8 1.3E-18 2.8E-23 114.1 8.1 73 5-78 2-77 (77)
31 cd03045 GST_N_Delta_Epsilon GS 99.8 2E-18 4.3E-23 112.4 8.1 71 5-76 1-74 (74)
32 cd03053 GST_N_Phi GST_N family 99.8 3.5E-18 7.6E-23 111.8 8.6 72 5-77 2-76 (76)
33 cd03050 GST_N_Theta GST_N fami 99.8 4.3E-18 9.3E-23 111.4 8.8 73 5-78 1-76 (76)
34 cd03060 GST_N_Omega_like GST_N 99.8 3.6E-18 7.7E-23 110.3 8.1 68 6-74 2-70 (71)
35 cd03185 GST_C_Tau GST_C family 99.7 2.7E-17 5.8E-22 118.0 12.1 123 89-212 2-124 (126)
36 cd03048 GST_N_Ure2p_like GST_N 99.7 8.3E-18 1.8E-22 111.4 8.3 73 5-79 2-80 (81)
37 cd03039 GST_N_Sigma_like GST_N 99.7 4.5E-18 9.9E-23 110.1 6.8 71 5-76 1-72 (72)
38 cd03044 GST_N_EF1Bgamma GST_N 99.7 1E-17 2.2E-22 109.3 7.8 71 5-76 1-74 (75)
39 cd03056 GST_N_4 GST_N family, 99.7 1.2E-17 2.6E-22 108.3 8.0 70 5-75 1-73 (73)
40 cd03047 GST_N_2 GST_N family, 99.7 1.5E-17 3.4E-22 107.9 7.8 70 5-75 1-73 (73)
41 cd03055 GST_N_Omega GST_N fami 99.7 2.2E-17 4.8E-22 111.2 8.5 71 4-75 18-89 (89)
42 cd03046 GST_N_GTT1_like GST_N 99.7 2.1E-17 4.6E-22 108.0 8.2 73 5-79 1-76 (76)
43 cd03049 GST_N_3 GST_N family, 99.7 1.7E-17 3.7E-22 107.7 7.6 70 5-75 1-73 (73)
44 cd03037 GST_N_GRX2 GST_N famil 99.7 2E-17 4.3E-22 106.8 7.6 70 5-76 1-71 (71)
45 cd03057 GST_N_Beta GST_N famil 99.7 3.6E-17 7.8E-22 107.3 8.2 73 5-79 1-77 (77)
46 cd03051 GST_N_GTT2_like GST_N 99.7 3E-17 6.4E-22 106.6 7.4 70 5-75 1-74 (74)
47 cd03042 GST_N_Zeta GST_N famil 99.7 4E-17 8.6E-22 105.8 7.9 70 5-75 1-73 (73)
48 cd03077 GST_N_Alpha GST_N fami 99.7 6.3E-17 1.4E-21 106.5 8.5 72 4-79 1-77 (79)
49 KOG3029 Glutathione S-transfer 99.7 3.2E-16 7E-21 121.9 12.9 182 4-194 90-355 (370)
50 cd03075 GST_N_Mu GST_N family, 99.7 6.1E-17 1.3E-21 107.3 7.6 72 6-78 2-82 (82)
51 cd03080 GST_N_Metaxin_like GST 99.7 1.3E-16 2.8E-21 104.0 8.1 67 5-79 2-75 (75)
52 PF02798 GST_N: Glutathione S- 99.7 1.1E-16 2.5E-21 104.5 7.9 71 5-76 1-76 (76)
53 cd03040 GST_N_mPGES2 GST_N fam 99.7 1.1E-16 2.4E-21 104.9 7.7 72 4-78 1-76 (77)
54 PF13409 GST_N_2: Glutathione 99.7 1.2E-16 2.5E-21 102.8 7.5 65 12-77 1-70 (70)
55 KOG4244 Failed axon connection 99.7 1.1E-15 2.5E-20 118.3 13.3 177 5-193 46-272 (281)
56 cd03186 GST_C_SspA GST_N famil 99.7 1.2E-15 2.6E-20 106.4 10.6 105 89-200 2-106 (107)
57 COG2999 GrxB Glutaredoxin 2 [P 99.7 2.1E-15 4.6E-20 109.9 11.7 178 5-197 1-207 (215)
58 COG0435 ECM4 Predicted glutath 99.7 1.3E-15 2.8E-20 118.4 11.1 194 4-202 51-285 (324)
59 cd03190 GST_C_ECM4_like GST_C 99.7 1E-15 2.2E-20 112.2 9.9 127 89-216 3-131 (142)
60 cd03038 GST_N_etherase_LigE GS 99.7 5.2E-16 1.1E-20 103.5 7.6 67 11-79 14-84 (84)
61 cd03184 GST_C_Omega GST_C fami 99.6 2.5E-15 5.5E-20 107.6 10.9 119 90-212 2-122 (124)
62 cd03196 GST_C_5 GST_C family, 99.6 2.7E-15 5.9E-20 105.9 10.8 109 87-200 3-114 (115)
63 cd03043 GST_N_1 GST_N family, 99.6 1.6E-15 3.5E-20 98.2 7.8 66 9-75 6-73 (73)
64 cd00570 GST_N_family Glutathio 99.6 4.2E-15 9.1E-20 94.9 7.9 70 5-75 1-71 (71)
65 cd03188 GST_C_Beta GST_C famil 99.6 9.5E-15 2.1E-19 102.7 9.2 104 90-201 2-114 (114)
66 KOG2903 Predicted glutathione 99.6 9.4E-15 2E-19 112.7 8.6 194 4-202 37-287 (319)
67 cd03054 GST_N_Metaxin GST_N fa 99.6 1.2E-14 2.6E-19 94.0 7.7 65 5-77 1-72 (72)
68 cd03182 GST_C_GTT2_like GST_C 99.6 8.4E-14 1.8E-18 98.5 11.7 104 87-197 1-117 (117)
69 cd03198 GST_C_CLIC GST_C famil 99.6 5.1E-14 1.1E-18 101.1 10.5 107 102-211 8-132 (134)
70 cd03189 GST_C_GTT1_like GST_C 99.5 1.2E-13 2.5E-18 98.1 11.7 103 85-195 2-119 (119)
71 cd03201 GST_C_DHAR GST_C famil 99.5 1.2E-13 2.5E-18 98.3 11.4 106 102-211 11-118 (121)
72 cd03203 GST_C_Lambda GST_C fam 99.5 1.1E-13 2.4E-18 98.5 11.1 115 87-211 1-119 (120)
73 cd03191 GST_C_Zeta GST_C famil 99.5 3.9E-14 8.5E-19 100.8 8.7 108 89-204 2-120 (121)
74 cd03187 GST_C_Phi GST_C family 99.5 5.9E-14 1.3E-18 99.3 9.2 106 90-201 2-118 (118)
75 cd03178 GST_C_Ure2p_like GST_C 99.5 3.7E-14 8E-19 99.7 7.4 105 90-201 1-112 (113)
76 cd03177 GST_C_Delta_Epsilon GS 99.5 1.3E-13 2.8E-18 97.8 9.7 105 90-201 2-110 (118)
77 cd03209 GST_C_Mu GST_C family, 99.5 1.4E-13 3.1E-18 98.0 9.5 109 90-206 2-112 (121)
78 cd03180 GST_C_2 GST_C family, 99.5 3.4E-13 7.4E-18 94.1 11.0 100 90-197 2-110 (110)
79 cd03181 GST_C_EFB1gamma GST_C 99.5 1.4E-13 3.1E-18 98.1 8.6 111 90-205 1-118 (123)
80 cd03210 GST_C_Pi GST_C family, 99.5 2.5E-13 5.4E-18 97.5 8.7 109 89-205 2-114 (126)
81 cd03200 GST_C_JTV1 GST_C famil 99.5 3.5E-13 7.5E-18 92.0 8.6 95 71-193 1-95 (96)
82 cd03208 GST_C_Alpha GST_C fami 99.5 4.5E-13 9.7E-18 97.5 9.7 109 89-205 2-117 (137)
83 cd03183 GST_C_Theta GST_C fami 99.4 9.6E-13 2.1E-17 94.3 8.5 104 91-201 2-120 (126)
84 cd03207 GST_C_8 GST_C family, 99.4 5.1E-13 1.1E-17 92.3 6.5 97 97-202 4-101 (103)
85 cd03206 GST_C_7 GST_C family, 99.4 2.2E-12 4.8E-17 88.7 7.7 71 119-197 30-100 (100)
86 cd03195 GST_C_4 GST_C family, 99.4 2.7E-12 5.9E-17 90.4 8.2 103 89-202 2-112 (114)
87 PF00043 GST_C: Glutathione S- 99.4 4.3E-12 9.3E-17 86.3 8.1 71 119-195 25-95 (95)
88 PF13410 GST_C_2: Glutathione 99.3 6.7E-12 1.4E-16 80.2 7.3 68 118-190 2-69 (69)
89 cd03179 GST_C_1 GST_C family, 99.3 9.2E-12 2E-16 86.1 7.8 95 90-192 2-105 (105)
90 cd03079 GST_N_Metaxin2 GST_N f 99.3 1.2E-11 2.6E-16 79.4 6.8 60 11-77 15-74 (74)
91 cd03204 GST_C_GDAP1 GST_C fami 99.3 2.8E-11 6E-16 84.3 8.3 75 118-197 25-111 (111)
92 cd03194 GST_C_3 GST_C family, 99.2 7.1E-11 1.5E-15 83.2 7.8 73 119-202 38-113 (114)
93 cd03192 GST_C_Sigma_like GST_C 99.2 1.2E-10 2.5E-15 80.5 8.6 95 90-191 2-104 (104)
94 PF14497 GST_C_3: Glutathione 99.2 4.3E-11 9.4E-16 82.1 6.1 96 87-193 2-99 (99)
95 cd00299 GST_C_family Glutathio 99.2 8.9E-11 1.9E-15 80.0 7.1 92 95-191 2-100 (100)
96 TIGR02190 GlrX-dom Glutaredoxi 99.2 1.4E-10 3E-15 76.2 7.7 72 3-75 8-79 (79)
97 KOG3027 Mitochondrial outer me 99.2 2E-09 4.3E-14 80.8 14.5 169 13-193 34-247 (257)
98 cd03202 GST_C_etherase_LigE GS 99.2 1.7E-10 3.8E-15 82.4 7.8 69 120-194 56-124 (124)
99 cd03193 GST_C_Metaxin GST_C fa 99.1 2.4E-10 5.2E-15 76.6 6.6 68 122-192 19-88 (88)
100 PRK10638 glutaredoxin 3; Provi 99.1 5.4E-10 1.2E-14 74.1 7.9 73 1-75 1-74 (83)
101 KOG3028 Translocase of outer m 99.1 1.7E-08 3.7E-13 80.6 16.4 172 12-193 16-233 (313)
102 cd03029 GRX_hybridPRX5 Glutare 99.0 2.2E-09 4.7E-14 69.1 7.9 71 4-75 2-72 (72)
103 cd03078 GST_N_Metaxin1_like GS 99.0 4E-09 8.7E-14 68.0 7.7 58 12-77 15-72 (73)
104 cd03205 GST_C_6 GST_C family, 98.8 3.8E-08 8.3E-13 67.2 8.3 68 116-191 31-98 (98)
105 cd03211 GST_C_Metaxin2 GST_C f 98.8 1.5E-08 3.2E-13 72.6 6.0 72 118-191 53-125 (126)
106 cd03197 GST_C_mPGES2 GST_C fam 98.8 6.5E-08 1.4E-12 70.3 8.7 115 62-193 29-145 (149)
107 PRK10329 glutaredoxin-like pro 98.7 3.9E-08 8.4E-13 64.7 6.6 61 4-65 2-62 (81)
108 TIGR02196 GlrX_YruB Glutaredox 98.7 7.5E-08 1.6E-12 61.7 7.1 70 4-74 1-73 (74)
109 cd03027 GRX_DEP Glutaredoxin ( 98.7 7.8E-08 1.7E-12 62.0 6.8 66 4-70 2-68 (73)
110 cd03212 GST_C_Metaxin1_3 GST_C 98.7 8.6E-08 1.9E-12 69.6 7.4 72 119-193 61-134 (137)
111 cd02976 NrdH NrdH-redoxin (Nrd 98.7 7.6E-08 1.7E-12 61.5 6.4 62 4-66 1-63 (73)
112 cd02066 GRX_family Glutaredoxi 98.7 1.4E-07 3.1E-12 60.0 7.3 69 4-73 1-70 (72)
113 PF14834 GST_C_4: Glutathione 98.6 3E-07 6.6E-12 63.1 8.4 104 87-201 1-112 (117)
114 COG0695 GrxC Glutaredoxin and 98.5 8.5E-07 1.8E-11 58.1 7.5 68 4-72 2-72 (80)
115 cd03418 GRX_GRXb_1_3_like Glut 98.5 1.2E-06 2.6E-11 56.6 7.5 70 4-74 1-72 (75)
116 PRK11200 grxA glutaredoxin 1; 98.4 1.5E-06 3.1E-11 57.7 7.7 75 4-79 2-84 (85)
117 TIGR02181 GRX_bact Glutaredoxi 98.4 1.3E-06 2.7E-11 57.1 7.1 71 5-76 1-72 (79)
118 TIGR02200 GlrX_actino Glutared 98.4 8.7E-07 1.9E-11 57.4 6.2 70 4-74 1-75 (77)
119 TIGR02194 GlrX_NrdH Glutaredox 98.4 8.2E-07 1.8E-11 57.0 5.7 57 5-62 1-57 (72)
120 PF00462 Glutaredoxin: Glutare 98.4 6.3E-07 1.4E-11 55.3 4.8 59 5-64 1-60 (60)
121 TIGR02183 GRXA Glutaredoxin, G 98.3 5.7E-06 1.2E-10 55.0 7.5 74 5-79 2-83 (86)
122 TIGR02189 GlrX-like_plant Glut 98.3 1E-05 2.2E-10 55.3 8.6 69 3-72 8-80 (99)
123 cd03419 GRX_GRXh_1_2_like Glut 98.2 1.1E-05 2.3E-10 52.9 8.2 72 4-76 1-76 (82)
124 PHA03050 glutaredoxin; Provisi 98.2 1.2E-05 2.6E-10 55.8 8.4 69 3-72 13-88 (108)
125 TIGR00365 monothiol glutaredox 97.9 5.8E-05 1.3E-09 51.3 7.4 70 3-73 12-87 (97)
126 TIGR02180 GRX_euk Glutaredoxin 97.9 9.5E-05 2.1E-09 48.5 8.1 71 5-76 1-77 (84)
127 cd03028 GRX_PICOT_like Glutare 97.9 8.7E-05 1.9E-09 49.7 7.5 71 3-74 8-84 (90)
128 PRK12759 bifunctional gluaredo 97.5 0.00047 1E-08 59.2 8.2 70 1-72 1-79 (410)
129 PF10568 Tom37: Outer mitochon 97.5 0.00071 1.5E-08 43.2 6.8 55 12-74 13-71 (72)
130 cd03031 GRX_GRX_like Glutaredo 97.4 0.00097 2.1E-08 48.8 7.4 68 4-72 1-79 (147)
131 PF04399 Glutaredoxin2_C: Glut 97.3 0.0019 4.2E-08 46.2 7.8 67 121-197 58-124 (132)
132 PRK10824 glutaredoxin-4; Provi 97.1 0.003 6.4E-08 44.2 7.2 70 3-73 15-90 (115)
133 KOG1147 Glutamyl-tRNA syntheta 97.1 0.00019 4.1E-09 61.9 0.9 106 60-189 44-150 (712)
134 cd02973 TRX_GRX_like Thioredox 96.7 0.0065 1.4E-07 37.9 5.8 58 4-65 2-64 (67)
135 KOG1752 Glutaredoxin and relat 96.7 0.011 2.4E-07 40.6 7.2 71 2-73 13-87 (104)
136 cd03199 GST_C_GRX2 GST_C famil 96.7 0.011 2.5E-07 42.0 7.3 67 121-197 59-125 (128)
137 cd03036 ArsC_like Arsenate Red 96.7 0.0025 5.5E-08 44.4 3.9 33 5-37 1-33 (111)
138 cd02977 ArsC_family Arsenate R 96.6 0.0031 6.7E-08 43.4 4.1 32 5-36 1-32 (105)
139 PRK01655 spxA transcriptional 96.6 0.0034 7.4E-08 45.1 4.3 32 5-36 2-33 (131)
140 cd03032 ArsC_Spx Arsenate Redu 96.5 0.0045 9.7E-08 43.4 4.4 32 5-36 2-33 (115)
141 COG4545 Glutaredoxin-related p 96.5 0.012 2.6E-07 37.2 5.5 63 1-65 1-77 (85)
142 PTZ00062 glutaredoxin; Provisi 96.5 0.016 3.6E-07 44.8 7.5 69 3-72 113-187 (204)
143 TIGR01617 arsC_related transcr 96.2 0.0081 1.7E-07 42.2 4.1 32 5-36 1-32 (117)
144 PRK13344 spxA transcriptional 96.2 0.0096 2.1E-07 42.8 4.4 32 5-36 2-33 (132)
145 PRK12559 transcriptional regul 96.1 0.0098 2.1E-07 42.7 4.3 32 5-36 2-33 (131)
146 TIGR00412 redox_disulf_2 small 96.0 0.044 9.5E-07 35.2 6.6 55 5-65 3-61 (76)
147 PRK10026 arsenate reductase; P 95.9 0.014 3E-07 42.4 4.3 34 1-35 1-34 (141)
148 cd03035 ArsC_Yffb Arsenate Red 95.7 0.017 3.7E-07 39.8 4.0 32 5-36 1-32 (105)
149 PF05768 DUF836: Glutaredoxin- 95.7 0.063 1.4E-06 35.0 6.5 55 4-61 1-57 (81)
150 cd03033 ArsC_15kD Arsenate Red 95.6 0.023 4.9E-07 39.7 4.2 32 5-36 2-33 (113)
151 COG1393 ArsC Arsenate reductas 95.0 0.043 9.4E-07 38.5 4.3 33 4-36 2-34 (117)
152 cd03030 GRX_SH3BGR Glutaredoxi 95.0 0.19 4.2E-06 33.6 7.0 67 5-72 2-79 (92)
153 TIGR00411 redox_disulf_1 small 94.9 0.13 2.8E-06 33.1 6.0 57 4-62 2-62 (82)
154 PRK10853 putative reductase; P 94.5 0.072 1.6E-06 37.5 4.2 32 5-36 2-33 (118)
155 TIGR01616 nitro_assoc nitrogen 94.0 0.099 2.2E-06 37.2 4.1 33 4-36 2-34 (126)
156 PHA02125 thioredoxin-like prot 93.9 0.28 6.1E-06 31.3 5.8 51 5-59 2-52 (75)
157 cd01659 TRX_superfamily Thiore 93.8 0.19 4E-06 29.6 4.8 54 5-59 1-59 (69)
158 TIGR00014 arsC arsenate reduct 93.2 0.15 3.2E-06 35.6 4.0 32 5-36 1-32 (114)
159 cd03034 ArsC_ArsC Arsenate Red 93.2 0.15 3.3E-06 35.4 4.0 32 5-36 1-32 (112)
160 cd03026 AhpF_NTD_C TRX-GRX-lik 92.6 0.26 5.5E-06 32.8 4.3 58 4-65 15-77 (89)
161 COG0278 Glutaredoxin-related p 92.1 0.86 1.9E-05 30.8 6.2 71 3-74 15-92 (105)
162 PF13192 Thioredoxin_3: Thiore 92.1 0.63 1.4E-05 29.7 5.5 57 5-67 3-63 (76)
163 PF04908 SH3BGR: SH3-binding, 91.6 0.69 1.5E-05 31.4 5.4 67 1-70 1-83 (99)
164 PF11287 DUF3088: Protein of u 90.1 1.3 2.7E-05 30.6 5.6 68 12-79 23-108 (112)
165 PF11801 Tom37_C: Tom37 C-term 89.3 1.2 2.5E-05 33.5 5.5 38 126-163 112-153 (168)
166 PF11417 Inhibitor_G39P: Loade 86.5 3.2 7E-05 26.3 5.4 63 66-155 5-69 (71)
167 PF03960 ArsC: ArsC family; I 83.5 1.6 3.5E-05 30.1 3.4 29 8-36 1-29 (110)
168 COG3019 Predicted metal-bindin 83.5 4.5 9.7E-05 29.2 5.5 75 4-78 27-104 (149)
169 KOG1668 Elongation factor 1 be 71.6 3.6 7.8E-05 32.3 2.4 55 128-194 10-64 (231)
170 PF09635 MetRS-N: MetRS-N bind 71.2 3.8 8.3E-05 28.8 2.3 27 53-79 35-63 (122)
171 TIGR03143 AhpF_homolog putativ 69.4 13 0.00029 33.5 5.9 58 4-66 479-542 (555)
172 cd02949 TRX_NTR TRX domain, no 66.7 34 0.00073 22.5 6.5 57 5-64 17-80 (97)
173 TIGR03140 AhpF alkyl hydropero 66.0 5.7 0.00012 35.4 2.9 72 4-77 120-198 (515)
174 cd02984 TRX_PICOT TRX domain, 65.6 34 0.00074 22.2 6.9 58 5-64 18-81 (97)
175 PRK15317 alkyl hydroperoxide r 64.4 7.5 0.00016 34.6 3.4 72 4-77 119-197 (517)
176 KOG0911 Glutaredoxin-related p 58.6 27 0.00059 27.4 5.0 68 4-72 140-213 (227)
177 TIGR01295 PedC_BrcD bacterioci 58.5 59 0.0013 22.7 6.5 32 5-36 27-62 (122)
178 cd02989 Phd_like_TxnDC9 Phosdu 56.5 62 0.0013 22.2 7.0 60 5-66 26-90 (113)
179 PF00085 Thioredoxin: Thioredo 55.0 56 0.0012 21.2 8.5 70 5-76 21-102 (103)
180 PTZ00051 thioredoxin; Provisio 54.0 58 0.0013 21.1 6.4 58 5-64 22-84 (98)
181 cd02947 TRX_family TRX family; 52.1 55 0.0012 20.3 6.8 54 5-62 14-74 (93)
182 cd04911 ACT_AKiii-YclM-BS_1 AC 51.9 17 0.00036 23.4 2.5 25 12-36 14-38 (76)
183 TIGR02187 GlrX_arch Glutaredox 51.8 36 0.00077 26.4 4.9 55 4-60 136-193 (215)
184 cd02975 PfPDO_like_N Pyrococcu 51.2 53 0.0011 22.5 5.2 53 5-59 25-81 (113)
185 cd02953 DsbDgamma DsbD gamma f 46.8 75 0.0016 21.0 5.4 52 5-58 15-77 (104)
186 TIGR02681 phage_pRha phage reg 46.8 23 0.00051 24.4 2.8 25 55-79 3-28 (108)
187 PF01323 DSBA: DSBA-like thior 45.6 38 0.00083 25.2 4.2 36 4-39 1-41 (193)
188 COG3646 Uncharacterized phage- 44.3 21 0.00045 26.7 2.3 33 115-147 84-116 (167)
189 cd02963 TRX_DnaJ TRX domain, D 41.6 1.1E+02 0.0024 20.7 6.5 57 5-63 28-91 (111)
190 PRK09381 trxA thioredoxin; Pro 40.8 1.1E+02 0.0023 20.4 7.1 58 5-64 25-88 (109)
191 TIGR02187 GlrX_arch Glutaredox 40.1 1.1E+02 0.0025 23.5 6.1 58 4-63 22-89 (215)
192 PF09413 DUF2007: Domain of un 38.9 34 0.00075 20.8 2.5 32 5-36 1-32 (67)
193 cd03021 DsbA_GSTK DsbA family, 38.9 51 0.0011 25.3 3.9 35 3-37 1-39 (209)
194 PHA03075 glutaredoxin-like pro 37.6 69 0.0015 22.4 3.8 69 1-78 1-70 (123)
195 PRK10996 thioredoxin 2; Provis 36.5 1.6E+02 0.0034 21.0 7.1 58 5-64 56-119 (139)
196 cd02951 SoxW SoxW family; SoxW 35.9 1.4E+02 0.0031 20.4 6.0 16 5-20 18-33 (125)
197 KOG2824 Glutaredoxin-related p 34.2 77 0.0017 25.8 4.2 56 16-72 150-210 (281)
198 PF11823 DUF3343: Protein of u 34.1 83 0.0018 19.6 3.7 32 5-36 3-34 (73)
199 PRK09266 hypothetical protein; 32.0 88 0.0019 25.1 4.4 56 22-78 200-258 (266)
200 PF04564 U-box: U-box domain; 31.8 1.3E+02 0.0029 18.7 5.1 25 53-78 15-39 (73)
201 cd03003 PDI_a_ERdj5_N PDIa fam 30.9 1.6E+02 0.0034 19.3 5.9 52 5-58 22-77 (101)
202 cd02956 ybbN ybbN protein fami 30.3 1.5E+02 0.0033 19.0 6.8 56 5-63 16-78 (96)
203 PRK11657 dsbG disulfide isomer 29.1 76 0.0016 25.4 3.5 21 4-24 120-140 (251)
204 cd03020 DsbA_DsbC_DsbG DsbA fa 28.3 69 0.0015 24.3 3.1 22 4-25 80-101 (197)
205 cd02972 DsbA_family DsbA famil 28.1 87 0.0019 19.7 3.2 22 5-26 1-22 (98)
206 cd02959 ERp19 Endoplasmic reti 28.1 2E+02 0.0044 19.7 6.0 60 5-65 23-91 (117)
207 cd02957 Phd_like Phosducin (Ph 27.8 2E+02 0.0042 19.4 5.2 59 5-66 28-91 (113)
208 PTZ00102 disulphide isomerase; 27.3 4.2E+02 0.009 23.0 8.2 73 5-79 53-139 (477)
209 PRK10877 protein disulfide iso 25.8 1.2E+02 0.0027 23.8 4.2 23 4-26 110-132 (232)
210 TIGR01068 thioredoxin thioredo 25.7 1.8E+02 0.004 18.4 6.7 56 5-62 18-79 (101)
211 PF13098 Thioredoxin_2: Thiore 25.7 79 0.0017 21.1 2.8 35 4-38 8-49 (112)
212 PF09849 DUF2076: Uncharacteri 25.3 3.6E+02 0.0078 21.7 8.3 67 66-138 5-71 (247)
213 PF11732 Thoc2: Transcription- 25.0 1.1E+02 0.0024 19.7 3.0 43 141-192 34-76 (77)
214 PF04134 DUF393: Protein of un 24.0 2.3E+02 0.0051 19.0 5.8 69 7-77 1-77 (114)
215 cd03022 DsbA_HCCA_Iso DsbA fam 23.1 1.3E+02 0.0028 22.4 3.7 32 5-36 1-36 (192)
216 PF15608 PELOTA_1: PELOTA RNA 23.0 1.6E+02 0.0034 20.1 3.6 29 6-34 59-87 (100)
217 PF00731 AIRC: AIR carboxylase 22.5 1.4E+02 0.0031 21.9 3.6 29 12-40 12-40 (150)
218 PF03711 OKR_DC_1_C: Orn/Lys/A 21.8 45 0.00097 24.1 0.9 35 41-77 78-112 (136)
219 COG0429 Predicted hydrolase of 21.8 2.3E+02 0.0049 24.0 5.0 70 6-85 80-152 (345)
220 PF09868 DUF2095: Uncharacteri 21.5 52 0.0011 23.0 1.1 65 15-79 24-92 (128)
221 cd02996 PDI_a_ERp44 PDIa famil 20.6 2.7E+02 0.0058 18.4 4.8 55 5-62 22-89 (108)
222 cd03004 PDI_a_ERdj5_C PDIa fam 20.4 2.5E+02 0.0055 18.2 4.4 52 5-58 23-78 (104)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-40 Score=251.27 Aligned_cols=213 Identities=46% Similarity=0.785 Sum_probs=192.4
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCC-CCC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWP-QDP 82 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~-~~~ 82 (227)
.++||++..|||++|++|+|.++||+|+.+..|+.+++++++..||..+|||||+++|..|+||..|++||++.++ +++
T Consensus 9 ~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~ 88 (231)
T KOG0406|consen 9 TVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPP 88 (231)
T ss_pred eEEEEEeecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCC
Confidence 4999999999999999999999999999999999999999999997667999999999999999999999999999 689
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhchHHHHHhhc-cCchHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCchhHHHHHhHH
Q 046710 83 LLPQDPYEKAMARFWAKFGDEKLLESAYKAMW-SKGEEKQKAMKEAVESLEKIEEVLG-GKNFMGGNSIGYLDLAIGWIG 160 (227)
Q Consensus 83 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l 160 (227)
++|+||.+|+.++.|..+++..++.....++. ..++.++...+.+.+.++.+|+.|. +.+|++|+++++.|+++++.+
T Consensus 89 iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~ 168 (231)
T KOG0406|consen 89 ILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSF 168 (231)
T ss_pred CCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhH
Confidence 99999999999999999999988777777666 5668889999999999999999999 889999999999999999766
Q ss_pred hHHHHH-hHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHHHHHHH
Q 046710 161 YWIPVW-EEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCHKRAEE 217 (227)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 217 (227)
.+.... ....+ .+.++.+++|+|.+|.+++.+++.+++++++.+...+++++.++.
T Consensus 169 ~~~~~~~~~~~~-~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~ 225 (231)
T KOG0406|consen 169 ERWLAVLEKFGG-VKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQG 225 (231)
T ss_pred HHHHHHHHHhcC-cccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHh
Confidence 555443 33333 456557899999999999999999999999999999999998875
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=2.6e-39 Score=252.82 Aligned_cols=196 Identities=23% Similarity=0.352 Sum_probs=168.1
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCCC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDPL 83 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~l 83 (227)
+|+||+++.|++|++++++|+++|++|+.+.++..+++++++++||.| +||+|++||.+|+||.||++||++++++..|
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~g-~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l 88 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQ-SVPTLVDRELTLYESRIIMEYLDERFPHPPL 88 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCCC-CCCEEEECCEEeeCHHHHHHHHHHhCCCCCC
Confidence 589999999999999999999999999999999888888999999998 9999999999999999999999999998889
Q ss_pred CCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHH
Q 046710 84 LPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWI 163 (227)
Q Consensus 84 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (227)
+|.++.++++++.|+.++...+...........+...+...+.+.+.+..+|++|++++|++|+++|+||+++++.+.++
T Consensus 89 ~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~ 168 (211)
T PRK09481 89 MPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRL 168 (211)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHH
Confidence 99999999999999988776544443332223344556667888999999999999999999999999999999988776
Q ss_pred HHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhh
Q 046710 164 PVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDR 206 (227)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 206 (227)
.. . + .++. .+.+|+|.+|++++.++|++++++...++
T Consensus 169 ~~---~-~-~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~~~~ 205 (211)
T PRK09481 169 PV---L-G-IELS-GPGAKELKGYMTRVFERDSFLASLTEAER 205 (211)
T ss_pred Hh---c-C-CCCC-CCCChhHHHHHHHHhccHHHHHHcCHHHH
Confidence 32 2 4 4442 25799999999999999999999876544
No 3
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=5.1e-36 Score=234.77 Aligned_cols=194 Identities=20% Similarity=0.236 Sum_probs=159.5
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
|. ||||+++.|+++++|+++|+++|++|+.+.++.. ..++++.++||+| +||+|++||.+|+||.||++||+++
T Consensus 1 ~~--~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g-~vP~L~~~g~~l~ES~aI~~YL~~~ 77 (214)
T PLN02473 1 MV--VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFG-QVPAIEDGDLKLFESRAIARYYATK 77 (214)
T ss_pred Cc--eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCC-CCCeEEECCEEEEehHHHHHHHHHH
Confidence 54 8999999999999999999999999999998865 4678899999998 9999999999999999999999999
Q ss_pred CCCC--CCCCCCHHHHHHHHHHHHHhhhhchHHHHH-----hhc---c---CchHHHHHHHHHHHHHHHHHHHhCCCccc
Q 046710 78 WPQD--PLLPQDPYEKAMARFWAKFGDEKLLESAYK-----AMW---S---KGEEKQKAMKEAVESLEKIEEVLGGKNFM 144 (227)
Q Consensus 78 ~~~~--~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~---~~~~~~~~~~~l~~~l~~le~~L~~~~~l 144 (227)
+++. +|+|.++.++++++.|+.+..+.+...+.. .+. . .....+...+++.+.++.+|+.|++++|+
T Consensus 78 ~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 157 (214)
T PLN02473 78 YADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYL 157 (214)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9743 699999999999999999887766443221 111 1 11233445678889999999999988999
Q ss_pred cCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCC
Q 046710 145 GGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLP 202 (227)
Q Consensus 145 ~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 202 (227)
+|+++|+||+++++.+.+...... . ..+ .+.+|+|.+|++++.++|++++++.
T Consensus 158 ~Gd~~t~ADi~~~~~~~~~~~~~~--~-~~~--~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 158 GGDEFTLADLTHMPGMRYIMNETS--L-SGL--VTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred cCCCCCHHHHHHHHHHHHHHhccc--c-HHH--HhcCHHHHHHHHHHhcChhhHHHHH
Confidence 999999999999998876532111 1 122 3689999999999999999998764
No 4
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=3.1e-35 Score=230.33 Aligned_cols=193 Identities=19% Similarity=0.215 Sum_probs=158.5
Q ss_pred CC-CceEEeccc--CChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHH
Q 046710 1 MT-TKVKLLGFW--CSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYI 74 (227)
Q Consensus 1 M~-~~~~Ly~~~--~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL 74 (227)
|+ ++++||+.+ .|++|++++++|+++||+|+.+.+++.. ..++++++||+| +||+|++||.+|+||.||++||
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g-~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTR-RVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCC-CCCEEEECCEEEecHHHHHHHH
Confidence 54 478999976 7999999999999999999999998763 568999999998 9999999999999999999999
Q ss_pred hhhCCCCC---CCCCCHHHHHHHHHHHHHhhhhchHHHHHh-----hc--cCchHHHHHHHHHHHHHHHHHHHhCC-Ccc
Q 046710 75 DETWPQDP---LLPQDPYEKAMARFWAKFGDEKLLESAYKA-----MW--SKGEEKQKAMKEAVESLEKIEEVLGG-KNF 143 (227)
Q Consensus 75 ~~~~~~~~---l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~l~~~l~~le~~L~~-~~~ 143 (227)
+++++++. ++|.++.+++++++|+.++...+....... +. ......+...+.+.+.++.+|++|++ ++|
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 159 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPN 159 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 99998665 999999999999999999876655432211 11 11223455677889999999999975 579
Q ss_pred ccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 144 MGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 144 l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
++|+ +|+||+++++.+.++. .. + .++ .|+|.+|++++.++|++++++++.+
T Consensus 160 l~G~-~TlADi~l~~~l~~~~---~~-~-~~~-----~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 160 LFGE-WCIADTDLALMLNRLV---LH-G-DEV-----PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred eeCC-ccHHHHHHHHHHHHHH---Hc-C-CCC-----CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 9995 9999999999987763 22 4 332 2999999999999999999876544
No 5
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=1.5e-34 Score=226.66 Aligned_cols=194 Identities=22% Similarity=0.312 Sum_probs=157.5
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
|+ +|||+.+. ++++|++++|+++|++|+.+.+++. ...+++.++||.| +||+|+++|.+|+||.+|++||+++
T Consensus 1 ~~--~~ly~~~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g-~vP~L~~~~~~l~ES~aI~~YL~~~ 76 (215)
T PLN02395 1 MV--LKVYGPAF-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFG-VVPVIVDGDYKIFESRAIMRYYAEK 76 (215)
T ss_pred Ce--EEEEcCCc-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCC-CCCEEEECCEEEEcHHHHHHHHHHH
Confidence 76 89999655 4799999999999999999999875 4568899999998 9999999999999999999999999
Q ss_pred CCC--CCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhh----c-------cCchHHHHHHHHHHHHHHHHHHHhCCCccc
Q 046710 78 WPQ--DPLLPQDPYEKAMARFWAKFGDEKLLESAYKAM----W-------SKGEEKQKAMKEAVESLEKIEEVLGGKNFM 144 (227)
Q Consensus 78 ~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l 144 (227)
+++ ++++|.++.++++++.|+.+....+.+.+.... . ...+..+...+.+.+.++.+|++|++++|+
T Consensus 77 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l 156 (215)
T PLN02395 77 YRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYL 156 (215)
T ss_pred cCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 974 369999999999999999988766554433211 1 112233455788899999999999989999
Q ss_pred cCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCC
Q 046710 145 GGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPP 203 (227)
Q Consensus 145 ~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 203 (227)
+|+++|+||+++++++.++.. .... ... .+.+|+|.+|++++.++|++++++..
T Consensus 157 ~G~~~s~ADi~l~~~~~~~~~--~~~~-~~~--~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 157 AGDFVSLADLAHLPFTEYLVG--PIGK-AYL--IKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred cCCCcCHHHHHHHHHHHHHhc--ccch-hhh--hccCchHHHHHHHHHcChHHHHHHHH
Confidence 999999999999988776521 1101 111 36799999999999999999987653
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=1e-34 Score=225.20 Aligned_cols=189 Identities=17% Similarity=0.319 Sum_probs=157.0
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC----CchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN----KSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~----~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~ 79 (227)
|+|||.+.| ++++++++|+++|++|+.+.+++.. ..+++.++||.| +||+|+ +||.+|+||.+|++||+++++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g-~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKG-QVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCC-CCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 589998866 8999999999999999999998752 457899999998 999998 588999999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHhhhhchHHHHHhhccC--chHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHH
Q 046710 80 QDPLL-PQDPYEKAMARFWAKFGDEKLLESAYKAMWSK--GEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAI 156 (227)
Q Consensus 80 ~~~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l 156 (227)
++.++ |.++.++++++.|+.++.+.+.+.+...+... +.......+.+.+.++.+|+.|++++|++|+++|+||+++
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l 158 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYL 158 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHH
Confidence 77766 56788999999999988777666554444322 2223445678899999999999999999999999999999
Q ss_pred HhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCC
Q 046710 157 GWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPP 203 (227)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 203 (227)
++++.+... . + .+ .+.+|+|.+|++++.++|++++++..
T Consensus 159 ~~~~~~~~~---~-~-~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 159 FTVLRWAYA---V-K-LN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHhhc---c-C-CC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 998877632 2 4 33 36799999999999999999987653
No 7
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=2e-34 Score=225.86 Aligned_cols=186 Identities=17% Similarity=0.227 Sum_probs=151.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEe-----CC--eeeeehHHHHHHH
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVH-----DK--RVIVESFVFLEYI 74 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~-----~g--~~l~es~aI~~yL 74 (227)
+|||+.+ +++|++|+++|+++|++|+.+.+++.. ..++|+++||.| +||+|++ || .+|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~g-kVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNN-KIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCC-CCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7999887 789999999999999999999998753 468899999998 9999996 45 4799999999999
Q ss_pred hhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHh--hc-----cCchHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q 046710 75 DETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKA--MW-----SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGN 147 (227)
Q Consensus 75 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~ 147 (227)
+++++ .+.|.++.++++++.|+.+..+.+.+.+... +. ......+.....+.+.+..+|++|++++|++|+
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 157 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGE 157 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence 99986 3678899999999999999877766543221 11 112334555677889999999999999999999
Q ss_pred CCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCC
Q 046710 148 SIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLP 202 (227)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 202 (227)
++|+|||++++.+.... .. + .+ .+.+|+|.+|++++.++|++++++.
T Consensus 158 ~~t~ADi~l~~~~~~~~---~~-~-~~---~~~~P~l~~w~~r~~~rp~~~~~~~ 204 (215)
T PRK13972 158 NYSIADIACWPWVNAWT---RQ-R-ID---LAMYPAVKNWHERIRSRPATGQALL 204 (215)
T ss_pred CCCHHHHHHHHHHHHHh---hc-C-Cc---chhCHHHHHHHHHHHhCHHHHHHHH
Confidence 99999999988764431 11 3 22 3779999999999999999988654
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=1e-33 Score=219.90 Aligned_cols=192 Identities=21% Similarity=0.332 Sum_probs=156.4
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCCCCCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWPQDPL 83 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~~~~l 83 (227)
|+||+++.||++++|+++|+++|++|+.+.++.....+++.++||.| +||+|+ ++|.+|+||.+|++||++++++++|
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~g-~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l 79 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLG-KVPALVTEEGECWFDSPIIAEYIELLNVAPAM 79 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCcc-CCCeEEeCCCCeeecHHHHHHHHHHhCCCCCC
Confidence 58999999999999999999999999999998776667788899998 999998 6789999999999999999987789
Q ss_pred CCCCHHHHHHHHHHHHHhhhhchHHHHHhhc---c----CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHH
Q 046710 84 LPQDPYEKAMARFWAKFGDEKLLESAYKAMW---S----KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAI 156 (227)
Q Consensus 84 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l 156 (227)
+|.++.++++++.|..+..+.+......... . .........+.+.+.++.+|++|++++ ++|+++|+||+++
T Consensus 80 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l 158 (202)
T PRK10357 80 LPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAI 158 (202)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHH
Confidence 9999999999999988876654333221111 1 122234556788999999999998878 9999999999999
Q ss_pred HhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCC
Q 046710 157 GWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPP 203 (227)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 203 (227)
++.+.+.... .. + ..+ .+.+|++.+|++++.++|+++.+.+.
T Consensus 159 ~~~l~~~~~~-~~-~-~~~--~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 159 ACAVGYLNFR-RV-A-PGW--CVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHhc-cc-C-cch--hhcChHHHHHHHHHhcChhhhhcCCC
Confidence 9988766321 11 1 222 35799999999999999999998764
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=6.7e-34 Score=222.09 Aligned_cols=190 Identities=27% Similarity=0.459 Sum_probs=156.2
Q ss_pred EEecccCChHHHHHHHHHHhhCCCceEEEccCC----CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCC
Q 046710 6 KLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF----NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQD 81 (227)
Q Consensus 6 ~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~----~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~ 81 (227)
+||+++.|++++++|++|+++|++|+.+.++.. ...+++.++||+| ++|+|++||.+|+||.+|++||+++++++
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g-~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQG-LVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCC-cCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999862 2467899999998 99999999999999999999999999887
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhchHH----HHHhhcc----Cch-HHHHHHHHHHHHHHHHHHHhCC--CccccCCCCc
Q 046710 82 PLLPQDPYEKAMARFWAKFGDEKLLES----AYKAMWS----KGE-EKQKAMKEAVESLEKIEEVLGG--KNFMGGNSIG 150 (227)
Q Consensus 82 ~l~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~-~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t 150 (227)
+++|.++.+++++++|+.++...+... +..++.. .+. ..+...+.+.+.++.||++|++ ++|++|+++|
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 159 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPT 159 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCC
Confidence 899999999999999999887655432 1112211 112 2233456688999999999985 4699999999
Q ss_pred hhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCCh
Q 046710 151 YLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPR 204 (227)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 204 (227)
+|||++++.+.+.. .. + .. .+.+|+|++|+++|.++|+++++....
T Consensus 160 ~ADi~~~~~l~~~~---~~-~-~~---~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 160 LADLCLVPQVYNAE---RF-G-VD---LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHHH---Hc-C-CC---cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 99999999988763 22 3 22 367999999999999999999988653
No 10
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-34 Score=206.28 Aligned_cols=193 Identities=27% Similarity=0.461 Sum_probs=161.3
Q ss_pred CceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC----CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 3 TKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN----KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 3 ~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~----~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
.+.+||++..|.+++|||++|+.+||+|+.++|++-. ...+|.++||.+ +||+|++||.+|+||.||++||++.+
T Consensus 4 ~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~-kVP~L~i~g~tl~eS~AII~YLeEt~ 82 (217)
T KOG0868|consen 4 AKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPME-KVPTLVIDGLTLTESLAIIEYLEETY 82 (217)
T ss_pred ccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchh-hCCeEEECCEEeehHHHHHHHHHhcC
Confidence 3789999999999999999999999999999998752 456899999997 99999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHh---hccCc---hHHHHHHHHHHHHHHHHHHHhC--CCccccCCCCc
Q 046710 79 PQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKA---MWSKG---EEKQKAMKEAVESLEKIEEVLG--GKNFMGGNSIG 150 (227)
Q Consensus 79 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~l~~~l~~le~~L~--~~~~l~G~~~t 150 (227)
|+++|+|.|+..|+.++.+...+..-+.+.-... +.+.+ ....=+...+.+.|..||..|. .+.|.+||++|
T Consensus 83 P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevt 162 (217)
T KOG0868|consen 83 PDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVT 162 (217)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceee
Confidence 9999999999999999999988876655432221 11111 1122335667889999999997 58899999999
Q ss_pred hhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCCh
Q 046710 151 YLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPR 204 (227)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 204 (227)
+||+++.+.+....++ . .+ ...||-+.+..+.+...|.|+..++++
T Consensus 163 iADl~L~pqv~nA~rf----~-vd---l~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 163 IADLCLPPQVYNANRF----H-VD---LTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred hhhhccchhhhhhhhc----c-cc---CCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999999988876322 4 33 488999999999999999999988764
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-33 Score=219.25 Aligned_cols=185 Identities=30% Similarity=0.516 Sum_probs=160.4
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC--CCchhHHhhCCCCceecEEEeCCe-eeeehHHHHHHHhhhCCCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF--NKSTELLELNPVHKKVPVLVHDKR-VIVESFVFLEYIDETWPQD 81 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~--~~~~~~~~~~p~g~~vP~L~~~g~-~l~es~aI~~yL~~~~~~~ 81 (227)
++||+.+.||+|++++++|.++|++|+.+.|+.. ...++|..+||.| +||+|++++. +|+||.||++||+++||++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~g-kVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLG-KVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCC-CCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 5899999999999999999999999999999987 4788999999998 9999998765 8999999999999999977
Q ss_pred CCCCCCHH---HHHHHHHHHHHhhhhchHHHHHhhcc--------CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCc
Q 046710 82 PLLPQDPY---EKAMARFWAKFGDEKLLESAYKAMWS--------KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIG 150 (227)
Q Consensus 82 ~l~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t 150 (227)
+++|.++. +|+.+..|+.+....+.+.+...... ..+......+.+...++.+|..|+.++|++|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 69998885 88888899999988877776665443 34555667888999999999999999999999999
Q ss_pred hhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCcccc
Q 046710 151 YLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIK 198 (227)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 198 (227)
+||+++++.+.++. .. + ..+ +.+|++.+|++++.++|.++
T Consensus 160 iAD~~~~~~~~~~~---~~-~-~~~---~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLA---LL-G-EEL---ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhh---hc-C-ccc---ccChHHHHHHHHHHcCCchh
Confidence 99999999888862 22 3 222 67999999999999999965
No 12
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=1.1e-32 Score=216.61 Aligned_cols=193 Identities=18% Similarity=0.247 Sum_probs=158.4
Q ss_pred ccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCC---CCCCCC
Q 046710 10 FWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQ---DPLLPQ 86 (227)
Q Consensus 10 ~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~---~~l~p~ 86 (227)
.+.||+|++++++|.++|++|+.+.+++..++++|+++||.| +||+|+++|.+|+||.+|++||++++++ +.+.|.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~g-~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~ 94 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPGT-HPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPK 94 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcCC-CCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCC
Confidence 468999999999999999999999999998889999999998 9999999999999999999999999974 446666
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHhhcc-CchHHHHHHHHHHHHHHHHHHHhC------------------CCccccCC
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYKAMWS-KGEEKQKAMKEAVESLEKIEEVLG------------------GKNFMGGN 147 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~------------------~~~~l~G~ 147 (227)
++..++... .++..+..++.. .+...+...+.+.+.++.||++|. +++|+.|+
T Consensus 95 ~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd 166 (236)
T TIGR00862 95 HPESNTAGL--------DIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGD 166 (236)
T ss_pred CHHHHHHHH--------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCC
Confidence 765544321 122333333322 233445556678999999999996 57999999
Q ss_pred CCchhHHHHHhHHhHHHHH-hHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHHHH
Q 046710 148 SIGYLDLAIGWIGYWIPVW-EEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCHKR 214 (227)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 214 (227)
++|+|||++++.+.++... ....+ .++ .+.+|+|.+|++++.++|+++++++..+++...+++.
T Consensus 167 ~~tlaD~~l~p~l~~l~~~~~~~~~-~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 167 ELTLADCNLLPKLHIVKVVAKKYRN-FDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhC-cCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 9999999999999988653 23336 665 6899999999999999999999999999999888876
No 13
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=221.68 Aligned_cols=196 Identities=18% Similarity=0.243 Sum_probs=154.0
Q ss_pred ceEEecccCChHHHHHHHHHHhh------CCCceEEEccCCC---CchhHHhhCCCCceecEEEeC----CeeeeehHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLK------GVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVHD----KRVIVESFVF 70 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~------gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~~----g~~l~es~aI 70 (227)
+|+||+.+ |++|++|+++|+++ |++|+.+.+++.. ..++|.++||.| +||+|+++ |.+|+||.||
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~G-kVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNS-KIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCC-CCCEEEeCCCCCCeEEEcHHHH
Confidence 68999975 99999999999997 8999999988753 568999999998 99999974 3689999999
Q ss_pred HHHHhhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHH----Hhhc-cC---chHHHHHHHHHHHHHHHHHHHhCCCc
Q 046710 71 LEYIDETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAY----KAMW-SK---GEEKQKAMKEAVESLEKIEEVLGGKN 142 (227)
Q Consensus 71 ~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~---~~~~~~~~~~l~~~l~~le~~L~~~~ 142 (227)
++||+++++ +|+|.++.++++++.|+.+..... .... ..+. .. ....+....++.+.++.+|++|++++
T Consensus 122 l~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHE 198 (264)
T ss_pred HHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999997 399999999999999999876542 2111 1111 11 12234446678889999999999999
Q ss_pred cccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 143 FMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 143 ~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
|++|+++|+|||++++.+.++........ .+..+.+.+|++.+|++++.++|++++++..+.
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~-~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDA-AEFLDVGSYKHVQRWAKEIAERPAVKRGRIVNR 260 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhcccccc-ccccCcccCHHHHHHHHHHHhCHHHHHHHhccc
Confidence 99999999999999988776632111101 122234789999999999999999999876543
No 14
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=1.8e-32 Score=213.23 Aligned_cols=191 Identities=17% Similarity=0.167 Sum_probs=143.5
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHH--------hhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELL--------ELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~--------~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
|+.+++|||++.+++++++|++|+++|++|+.+.++. .. +.+. ..||+| +||+|++||.+|+||.||++
T Consensus 1 m~~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~-~~-~~~~~~~~~~~~~~nP~g-~vP~L~~~~~~l~eS~AI~~ 77 (205)
T PTZ00057 1 MAEEIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE-NG-DAFIEFKNFKKEKDTPFE-QVPILEMDNIIFAQSQAIVR 77 (205)
T ss_pred CCCceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc-cc-hHHHHHHhccccCCCCCC-CCCEEEECCEEEecHHHHHH
Confidence 7778999999999999999999999999999997753 22 2332 489998 99999999999999999999
Q ss_pred HHhhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCC--ccccCCCCc
Q 046710 73 YIDETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGK--NFMGGNSIG 150 (227)
Q Consensus 73 yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~~l~G~~~t 150 (227)
||+++++ +.+.+..++..+..+.....+. ...+.......+...+...+.+.+.+..||+.|+++ +|++|+++|
T Consensus 78 YLa~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T 153 (205)
T PTZ00057 78 YLSKKYK---ICGESELNEFYADMIFCGVQDI-HYKFNNTNLFKQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLT 153 (205)
T ss_pred HHHHHcC---CCCCCHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCccc
Confidence 9999997 5566655555554433332222 211111111111222344678899999999999753 799999999
Q ss_pred hhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 151 YLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
+||+++++.+.++... . + .+ .+.+|+|.+|++++.++|++++++.++.
T Consensus 154 ~AD~~l~~~~~~~~~~--~-~-~~---l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 154 YADLAVFNLYDDIETK--Y-P-NS---LKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred HHHHHHHHHHHHHHHh--C-h-hh---hccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 9999999988776321 1 2 22 3789999999999999999999987654
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=1.4e-31 Score=209.43 Aligned_cols=187 Identities=20% Similarity=0.296 Sum_probs=146.8
Q ss_pred ccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCCCCCCCHH
Q 046710 10 FWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDPLLPQDPY 89 (227)
Q Consensus 10 ~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~l~p~~~~ 89 (227)
+..||||+||+++|+++|++|+.+.+++..+.++|+++||.| +||+|++||.+|+||.+|++||++++++..+ .++.
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~G-~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~~~~ 93 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQG-KVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--KTPA 93 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCCC-CCCEEEECCEEecCHHHHHHHHHHhCCCCCC--CCHH
Confidence 456999999999999999999999999988888999999998 9999999999999999999999999986555 3566
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhC--CCccccCCCCchhHHHHHhHHhHHHHHh
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLG--GKNFMGGNSIGYLDLAIGWIGYWIPVWE 167 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (227)
+++.+...+. ..+..++... ...+...+.+.+.++.+|++|+ +++|++|+++|+||+++++.+.++....
T Consensus 94 ~~a~i~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~ 165 (213)
T PLN02378 94 EFASVGSNIF-------GTFGTFLKSK-DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVAL 165 (213)
T ss_pred HHHHHHHHHH-------HHHHHHHhcC-ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHH
Confidence 7776654332 2222222221 1223445677888999999997 5789999999999999999987764321
Q ss_pred -HhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHH
Q 046710 168 -EAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAY 210 (227)
Q Consensus 168 -~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 210 (227)
...+ .+. .+.+|+|.+|++++.++|++++++.........
T Consensus 166 ~~~~~-~~~--~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~~ 206 (213)
T PLN02378 166 GHFKS-WSV--PESFPHVHNYMKTLFSLDSFEKTKTEEKYVISG 206 (213)
T ss_pred HHhcC-CCc--hhHhHHHHHHHHHHhcCCCeecccCChHHHHHH
Confidence 1112 222 367999999999999999999998887765543
No 16
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=100.00 E-value=4.1e-31 Score=211.88 Aligned_cols=188 Identities=20% Similarity=0.286 Sum_probs=149.0
Q ss_pred cCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCCCCCCCHHH
Q 046710 11 WCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDPLLPQDPYE 90 (227)
Q Consensus 11 ~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~l~p~~~~~ 90 (227)
..||||++++++|+++|++|+.+.+++.++.++|.++||.| +||+|+++|..|+||.+|++||+++++++.+. ++.+
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~G-kVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~~e 147 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPEG-KVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TPPE 147 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCCC-CCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CHHH
Confidence 34999999999999999999999999988889999999998 99999999999999999999999999976664 5778
Q ss_pred HHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCchhHHHHHhHHhHHHHHhH-
Q 046710 91 KAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGG-KNFMGGNSIGYLDLAIGWIGYWIPVWEE- 168 (227)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~~~- 168 (227)
++++..++. ..+..++.... ..+...+.+.+.+..+|++|++ ++|++|+++|+|||++++.+.++.....
T Consensus 148 ra~i~~~l~-------~~~~~~~~~~~-~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~ 219 (265)
T PLN02817 148 KASVGSKIF-------STFIGFLKSKD-PGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGH 219 (265)
T ss_pred HHHHHHHHH-------HHHHHHhccCC-cchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 888766542 22222222211 1123345677889999999974 7999999999999999999887754211
Q ss_pred hcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHH
Q 046710 169 AGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCH 212 (227)
Q Consensus 169 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 212 (227)
..+ .++ .+.+|+|.+|++++.++|+++++....+++..-+.
T Consensus 220 ~~~-~~i--~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~ 260 (265)
T PLN02817 220 YKN-WSV--PDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWR 260 (265)
T ss_pred hcC-CCc--cccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhH
Confidence 212 333 47899999999999999999999988777665543
No 17
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=5.9e-31 Score=206.95 Aligned_cols=197 Identities=27% Similarity=0.379 Sum_probs=167.7
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCC-
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWP- 79 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~- 79 (227)
+++||+++.|+.++++.+++.+.|++|+.+.++.. +.+++|+++||.| +||+|+++|..++||+||+.||.++|.
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~-kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLG-KVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCC-CCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 38999999999999999999999999999987765 5889999999998 999999999999999999999999996
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHhhhhchHHH--HHhhc-------cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Q 046710 80 QDP-LLPQDPYEKAMARFWAKFGDEKLLESA--YKAMW-------SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSI 149 (227)
Q Consensus 80 ~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~ 149 (227)
.+. ++|.++.+++.+++|+.+..+.+.+.. ..++. .+........+.+.+.++.+|..|.++.|+.|+++
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~ 160 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQL 160 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcc
Confidence 334 899999999999999999998887764 22222 25667778899999999999999999999999999
Q ss_pred chhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhh
Q 046710 150 GYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDR 206 (227)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 206 (227)
|+||+.+.+.+..+.. ... . . .+...+|++.+|++++.++|++++.......
T Consensus 161 tlADl~~~~~~~~~~~-~~~-~-~--~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~~ 212 (226)
T KOG0867|consen 161 TLADLSLASTLSQFQG-KFA-T-E--KDFEKYPKVARWYERIQKRPAYEEANEKGAA 212 (226)
T ss_pred cHHHHHHhhHHHHHhH-hhh-h-h--hhhhhChHHHHHHHHHHhCccHHHHHHHHHH
Confidence 9999999998888731 111 1 1 1258899999999999999997776554443
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=2.2e-30 Score=202.21 Aligned_cols=179 Identities=18% Similarity=0.183 Sum_probs=137.8
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCCCCCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWPQDPL 83 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~~~~l 83 (227)
||||+++.||+|++++++|+++|++|+.+.++..+... ..+.||.| +||+|+ +||.+|+||.+|++||+++|+++.+
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~-~~~~~p~~-~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l 78 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDDEAT-PIRMIGQK-QVPILQKDDGSYMPESLDIVHYIDELDGKPLL 78 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCchhh-HHHhcCCc-ccceEEecCCeEecCHHHHHHHHHHhCCCccC
Confidence 68999999999999999999999999999886543222 25789988 999995 7899999999999999999986544
Q ss_pred CCCCHHHHHHHHHHHHHhhhhchHHHHHhhcc-------Cch---------------------HHHHHHHHHHHHHHHHH
Q 046710 84 LPQDPYEKAMARFWAKFGDEKLLESAYKAMWS-------KGE---------------------EKQKAMKEAVESLEKIE 135 (227)
Q Consensus 84 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------------~~~~~~~~l~~~l~~le 135 (227)
.+ .+++.++.|+.+....+...+...+.. ... ..++..+.+.+.++.+|
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le 155 (210)
T PRK10387 79 TG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALD 155 (210)
T ss_pred CC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHH
Confidence 32 256778888877755544333221110 000 01345678899999999
Q ss_pred HHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCcccc
Q 046710 136 EVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIK 198 (227)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 198 (227)
++|++ +|++|+++|+||+++++.+.++.. ..+ . +.+|+|.+|++++.++|++.
T Consensus 156 ~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~---~~~-~-----~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 156 PLIVK-PNAVNGELSTDDIHLFPILRNLTL---VKG-I-----EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHhcC-ccccCCCCCHHHHHHHHHHhccee---ecC-C-----CCCHHHHHHHHHHHHHhCCC
Confidence 99987 999999999999999999888732 112 2 23699999999999999864
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.2e-29 Score=192.30 Aligned_cols=194 Identities=21% Similarity=0.219 Sum_probs=162.0
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCC
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQ 80 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~ 80 (227)
|. .+||+|++..++++.+|++++..|++|+++.++..+..+.++...|+| |+|+|..||..|.||.||++||+++++
T Consensus 1 m~-~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pfg-qlP~l~vDg~~i~QS~AI~RyLArk~g- 77 (206)
T KOG1695|consen 1 MP-PYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPFG-QLPVLEVDGKKLVQSRAILRYLARKFG- 77 (206)
T ss_pred CC-ceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCCC-CCCEEeECCEeeccHHHHHHHHHHHhC-
Confidence 55 799999999999999999999999999999998766445566678998 999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhcc-----CchHHH-HHHHHHHHHHHHHHHHhC--CCccccCCCCchh
Q 046710 81 DPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWS-----KGEEKQ-KAMKEAVESLEKIEEVLG--GKNFMGGNSIGYL 152 (227)
Q Consensus 81 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~l~~~l~~le~~L~--~~~~l~G~~~t~a 152 (227)
+.|.++.|.+.++.+.+.+.+.....+...+.. .....+ .........+..+++.|+ +++|++|+++|+|
T Consensus 78 --l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~a 155 (206)
T KOG1695|consen 78 --LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWA 155 (206)
T ss_pred --cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHH
Confidence 999999999999999999888755544443331 111122 456677889999999998 5689999999999
Q ss_pred HHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 153 DLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 153 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
|+.++..+..+... . . .+. .+.+|+|.++.+++.++|.+++++..+.
T Consensus 156 Dl~i~e~l~~l~~~--~-~-~~~--~~~~P~L~a~~~kv~~~p~ik~~i~~r~ 202 (206)
T KOG1695|consen 156 DLVIAEHLDTLEEL--L-D-PSA--LDHFPKLKAFKERVSSIPNIKKYLESRP 202 (206)
T ss_pred HHHHHHHHHHHHHh--c-C-chh--hccChHHHHHHHHHhcCchHHHHHhcCC
Confidence 99999998888442 1 3 443 4778999999999999999999987764
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.96 E-value=1e-27 Score=187.03 Aligned_cols=177 Identities=18% Similarity=0.227 Sum_probs=131.9
Q ss_pred EEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCCCCCCC
Q 046710 6 KLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWPQDPLL 84 (227)
Q Consensus 6 ~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~~~~l~ 84 (227)
|||++..||+|++||++|.++|++|+.+.++..+. ....+.||.| +||+|+ +||..|+||.+|++||+++|+.+.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~~~~~np~g-~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~ 78 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDDE-ETPIRMIGAK-QVPILQKDDGRAMPESLDIVAYFDKLDGEPLLT 78 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCcc-hhHHHhcCCC-CcceEEeeCCeEeccHHHHHHHHHHhCCCccCC
Confidence 68999999999999999999999999987754332 2347899998 999998 88999999999999999999864343
Q ss_pred CCCHHHHHHHHHHHHHhhhhchHHHHHhhc-----------------cCchH-----------HHHHHHHHHHHHHHHHH
Q 046710 85 PQDPYEKAMARFWAKFGDEKLLESAYKAMW-----------------SKGEE-----------KQKAMKEAVESLEKIEE 136 (227)
Q Consensus 85 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~-----------~~~~~~~l~~~l~~le~ 136 (227)
|. ++..++.|+.++...+...+...+. ...+. .++..+.+.+.++.+|+
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~ 155 (209)
T TIGR02182 79 GK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDK 155 (209)
T ss_pred CC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHH
Confidence 32 3456677776655444333221111 00000 13456778899999999
Q ss_pred HhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcch-HHHHHHHHHhcCcccc
Q 046710 137 VLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFP-AIAEWSTKFLKHPVIK 198 (227)
Q Consensus 137 ~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 198 (227)
+|++++|++| ++|+||+++++.+.++. ...+ . .+| +|.+|++|+.+++++.
T Consensus 156 ~L~~~~~l~g-~~TiADi~l~~~l~~~~---~~~~-~------~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 156 LIDGPNAVNG-ELSEDDILVFPLLRNLT---LVAG-I------NWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHhCccccCC-CCCHHHHHHHHHhcCee---eecC-C------CCChHHHHHHHHHHHHhCCC
Confidence 9999999955 69999999999988762 2112 1 256 9999999999998763
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.92 E-value=8.7e-25 Score=167.47 Aligned_cols=202 Identities=16% Similarity=0.218 Sum_probs=149.0
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCC-
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWP- 79 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~- 79 (227)
.+.||.++.|.-+|+||++++++||+|+...|++. ...+||..+||.| .||||+++..+|+++.-|++|++++|.
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~g-evPVl~~g~~II~d~tqIIdYvErtf~g 104 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGG-EVPVLIHGDNIISDYTQIIDYVERTFTG 104 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCC-CCceEecCCeecccHHHHHHHHHHhhcc
Confidence 48999999998899999999999999999999887 4789999999988 999999999999999999999999994
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHh---------h-hhchHHH------------HHhhc----------------------
Q 046710 80 QDPLLPQ-DPYEKAMARFWAKFG---------D-EKLLESA------------YKAMW---------------------- 114 (227)
Q Consensus 80 ~~~l~p~-~~~~~~~~~~~~~~~---------~-~~~~~~~------------~~~~~---------------------- 114 (227)
++.|.|. +..+..++...-... . -.+++.+ +....
T Consensus 105 er~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ 184 (325)
T KOG4420|consen 105 ERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYL 184 (325)
T ss_pred cccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHH
Confidence 5567885 222222222111100 0 0001110 11000
Q ss_pred -------------cCchHHHHHHHHHHHHHHHHHHHhCC----CccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccC
Q 046710 115 -------------SKGEEKQKAMKEAVESLEKIEEVLGG----KNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILD 177 (227)
Q Consensus 115 -------------~~~~~~~~~~~~l~~~l~~le~~L~~----~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~ 177 (227)
.+.....+....+...++.+|..|.+ ..|++|+.+|+||+++.+.++++..+.-. -..+.
T Consensus 185 akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e---~~yw~ 261 (325)
T KOG4420|consen 185 AKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE---KKYWE 261 (325)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH---HHhcc
Confidence 01112233455567777888888876 67999999999999999999999765322 22334
Q ss_pred CCcchHHHHHHHHHhcCccccccCCChhhHHH
Q 046710 178 SQKFPAIAEWSTKFLKHPVIKENLPPRDRTLA 209 (227)
Q Consensus 178 ~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 209 (227)
.+..|||..|+.++.+|+++++++.....+.-
T Consensus 262 ~gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr 293 (325)
T KOG4420|consen 262 DGSRPNLESYFERVRRRFSFRKVLGDIFNILR 293 (325)
T ss_pred cCCCccHHHHHHHHHhhhHHHHhhhhHHHHHH
Confidence 57899999999999999999999988766554
No 22
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.91 E-value=6.8e-23 Score=152.85 Aligned_cols=194 Identities=20% Similarity=0.271 Sum_probs=159.0
Q ss_pred cCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCCCCCCCHHH
Q 046710 11 WCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDPLLPQDPYE 90 (227)
Q Consensus 11 ~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~l~p~~~~~ 90 (227)
..|||||++.+.|+++|++|.++.||+..++++|.++.|.| ++|+|..|+..++||..|-++|+++++++++---++.|
T Consensus 19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~~-~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E 97 (221)
T KOG1422|consen 19 GDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPGG-KPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPE 97 (221)
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCCC-CCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHH
Confidence 46999999999999999999999999999999999999987 99999999999999999999999999876543222334
Q ss_pred HHHHHHHHHHhhhhchHHHHHhhccCch-HHHHHHHHHHHHHHHHHHHhCC---CccccCCCCchhHHHHHhHHhHHHHH
Q 046710 91 KAMARFWAKFGDEKLLESAYKAMWSKGE-EKQKAMKEAVESLEKIEEVLGG---KNFMGGNSIGYLDLAIGWIGYWIPVW 166 (227)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~~~ 166 (227)
.+. +...++..+..++..+.+ ..+.....+...+..||++|++ ++|+.||++|.|||.+.|=|+.+...
T Consensus 98 ~as-------ag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va 170 (221)
T KOG1422|consen 98 SAS-------AGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVA 170 (221)
T ss_pred HHh-------hHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHH
Confidence 332 223335555555544444 4455577888889999999985 89999999999999999999988776
Q ss_pred hHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHHHH
Q 046710 167 EEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCHKR 214 (227)
Q Consensus 167 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 214 (227)
...+..+++ .++++.|++|+..+.++..+..+.++.+++...+...
T Consensus 171 ~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~ 216 (221)
T KOG1422|consen 171 AKHYKNFEI--PASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPV 216 (221)
T ss_pred HHHhcCCCC--chhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhh
Confidence 443322777 7999999999999999999999999999988777653
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.90 E-value=4e-23 Score=184.54 Aligned_cols=158 Identities=20% Similarity=0.181 Sum_probs=130.7
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCC
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~ 79 (227)
|+ ++||+.+.| .+.++.++|++.|++|+.+. .+|.| +||+|+ +||.+|+||.||++||++.++
T Consensus 1 ~~--~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~------------~~p~G-kVPvLv~ddG~~L~ES~AIl~YLa~~~p 64 (722)
T PLN02907 1 ME--AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP------------SLKSG-SAPTLLFSSGEKLTGTNVLLRYIARSAS 64 (722)
T ss_pred Ce--EEEEECCCC-ChHHHHHHHHHcCCCcEEee------------cCCCC-CCcEEEECCCCEEECHHHHHHHHHHhCC
Confidence 66 899999877 57789999999999999875 25788 999999 488999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhH
Q 046710 80 QDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWI 159 (227)
Q Consensus 80 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~ 159 (227)
+..|+|.++.+++++++|+.++..... ...+...++.||++|+.++|++|+++|+||+++++.
T Consensus 65 ~~~L~p~d~~erAqV~qWL~~~~~~~~-----------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~ 127 (722)
T PLN02907 65 LPGFYGQDAFESSQVDEWLDYAPTFSS-----------------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSG 127 (722)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhhccc-----------------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHH
Confidence 888999999999999999998754311 013556789999999999999999999999999988
Q ss_pred HhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCcc
Q 046710 160 GYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPV 196 (227)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 196 (227)
+..... .... ... .+.+|+|.+|++++.++|+
T Consensus 128 L~~~~~--~~~~-~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 128 LAGSGQ--RWES-LRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHhhhh--hhhc-ccc--cccCHHHHHHHHHHHhCCC
Confidence 765411 1112 222 4789999999999999999
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.83 E-value=3e-20 Score=121.32 Aligned_cols=74 Identities=42% Similarity=0.684 Sum_probs=70.8
Q ss_pred EecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCC
Q 046710 7 LLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQD 81 (227)
Q Consensus 7 Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~ 81 (227)
||+++.||||+++|++|+++||+|+.+.++..+..+++...||.| +||+|++||..++||.+|++||+++|+++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~~-~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPKG-KVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTTS-BSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhcccc-cceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 899999999999999999999999999999888889999999998 99999999999999999999999999864
No 25
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.80 E-value=3e-19 Score=115.95 Aligned_cols=73 Identities=37% Similarity=0.478 Sum_probs=69.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
|+||+.+.||+|++++++|+++|++|+.+.++..+..+++++.||.| ++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~~-~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPYG-TVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCCC-CCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 68999999999999999999999999999999887788999999998 99999999999999999999999875
No 26
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.80 E-value=4.2e-19 Score=115.59 Aligned_cols=73 Identities=60% Similarity=1.020 Sum_probs=68.2
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCC-CceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPV-HKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~-g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
|+||+++.||+|++++++|+++|++|+.+.++...+.+++.+.||. | ++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~-~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHK-KIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCC-CCCEEEECCEEeehHHHHHHHHHhhC
Confidence 6899999999999999999999999999999887778899999995 7 99999999999999999999999864
No 27
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.79 E-value=4e-19 Score=115.19 Aligned_cols=70 Identities=23% Similarity=0.394 Sum_probs=65.0
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++||+++.|++|++++++|+++|++|+.+.++.. ++.+++.++||.| +||+|++||.+|+||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g-~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTG-EVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCC-CCCEEEECCEEEEcHHHHHHHhC
Confidence 4899999999999999999999999999998874 3567899999998 99999999999999999999985
No 28
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.78 E-value=6.7e-19 Score=117.62 Aligned_cols=70 Identities=29% Similarity=0.390 Sum_probs=66.3
Q ss_pred cCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCC
Q 046710 11 WCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQD 81 (227)
Q Consensus 11 ~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~ 81 (227)
..||||+++|++|+++|++|+.+.+++.+++++|.++||.| ++|+|+++|.+|+||.+|++||+++++.+
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~g-~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPGT-QPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCCC-CCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 57999999999999999999999999988889999999998 99999999999999999999999998754
No 29
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.78 E-value=6.1e-19 Score=114.46 Aligned_cols=73 Identities=15% Similarity=0.061 Sum_probs=66.9
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
+++||+++.|++|+++|++|+++|++|+.+.++..+..+++.+.||.| ++|+|+++|.+++||.+|++||+++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~~-~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLFG-QLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCCC-CCCEEEECCEEEEcHHHHHHHHhcC
Confidence 379999999999999999999999999999998755556788999998 9999999999999999999999863
No 30
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.77 E-value=1.3e-18 Score=114.08 Aligned_cols=73 Identities=25% Similarity=0.219 Sum_probs=65.7
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEe--CCeeeeehHHHHHHHhhhC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVH--DKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~--~g~~l~es~aI~~yL~~~~ 78 (227)
++||+++.||+|++++++|.++|++|+.+.++..+ ..+++.+.||.| ++|+|++ +|..++||.+|++||+++|
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~-~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKV-QVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCC-cccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 79999999999999999999999999999886543 467889999998 9999996 4689999999999999875
No 31
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.77 E-value=2e-18 Score=112.37 Aligned_cols=71 Identities=34% Similarity=0.450 Sum_probs=65.8
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
++||+++.||+|++++++|+++|++|+.+.+++.. ..+++.+.||.| ++|+|+++|.+|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQH-TVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCC-CCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999999999999999999999998653 568999999998 999999999999999999999974
No 32
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.76 E-value=3.5e-18 Score=111.79 Aligned_cols=72 Identities=33% Similarity=0.470 Sum_probs=66.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
++||+++.||+|+++|++|+++|++|+.+.++.. +..+++.++||.| ++|+|+++|..++||.||++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~-~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFG-QIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCC-CCCEEEECCEEEEcHHHHHHHHhhC
Confidence 7999999999999999999999999999988865 3567899999998 9999999999999999999999874
No 33
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.76 E-value=4.3e-18 Score=111.38 Aligned_cols=73 Identities=29% Similarity=0.362 Sum_probs=67.0
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
++||+++.|+++++++++|+++|++|+.+.++..+ ..+++.++||.| ++|+|+++|.+|+||.||++||+++|
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFG-KVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCC-CCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 58999999999999999999999999999998653 456899999998 99999999999999999999999875
No 34
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.76 E-value=3.6e-18 Score=110.27 Aligned_cols=68 Identities=37% Similarity=0.521 Sum_probs=64.3
Q ss_pred EEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeC-CeeeeehHHHHHHH
Q 046710 6 KLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHD-KRVIVESFVFLEYI 74 (227)
Q Consensus 6 ~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~-g~~l~es~aI~~yL 74 (227)
+||+++.||||++++++|+++|++|+.+.++..+..++++++||.| +||+|+++ |..|+||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~~-~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPKG-TVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCCC-CCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999999999999999999999999887778999999998 99999974 99999999999997
No 35
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.75 E-value=2.7e-17 Score=118.00 Aligned_cols=123 Identities=46% Similarity=0.893 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhH
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEE 168 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (227)
.++++++.|+.+++..+.+.+...+...++..+.....+.+.++.+|++|++++|++|+++|+|||++++.+.++.....
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~ 81 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEE 81 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 47899999999999888888776665545555667888999999999999989999999999999999999888755433
Q ss_pred hcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHH
Q 046710 169 AGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCH 212 (227)
Q Consensus 169 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 212 (227)
..+ .++++.+.+|++.+|++++.++|++++++...+...+.++
T Consensus 82 ~~~-~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~ 124 (126)
T cd03185 82 VGG-VKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAK 124 (126)
T ss_pred HcC-ccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHH
Confidence 324 4432246799999999999999999999999877666554
No 36
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.74 E-value=8.3e-18 Score=111.40 Aligned_cols=73 Identities=29% Similarity=0.459 Sum_probs=66.9
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeC---CeeeeehHHHHHHHhhhC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHD---KRVIVESFVFLEYIDETW 78 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~---g~~l~es~aI~~yL~~~~ 78 (227)
++||+++. |+|++++++|+++|++|+.+.+++. ..++++.++||.| ++|+|+++ |..|+||.+|++||++++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNG-RIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCC-CCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 79999986 9999999999999999999999864 3568899999998 99999986 899999999999999988
Q ss_pred C
Q 046710 79 P 79 (227)
Q Consensus 79 ~ 79 (227)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 6
No 37
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.74 E-value=4.5e-18 Score=110.08 Aligned_cols=71 Identities=24% Similarity=0.245 Sum_probs=64.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
++||+++.|++|+++|++|+++|++|+.+.++... ....+.+.||.| ++|+|+++|..|+||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~~-~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPFG-QLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcCC-CCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999999988653 334578999998 999999999999999999999974
No 38
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.74 E-value=1e-17 Score=109.32 Aligned_cols=71 Identities=25% Similarity=0.351 Sum_probs=65.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC--CCchhHHhhCCCCceecEEEe-CCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF--NKSTELLELNPVHKKVPVLVH-DKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~--~~~~~~~~~~p~g~~vP~L~~-~g~~l~es~aI~~yL~~ 76 (227)
.+||+++.|+++++++++|+++|++|+.+.++.. ++.++++++||.| ++|+|++ ||.+|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~~-~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 1 GTLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPLG-KVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CeEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCCC-CCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 3799999999999999999999999999999876 4678999999998 9999996 58999999999999986
No 39
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=1.2e-17 Score=108.31 Aligned_cols=70 Identities=41% Similarity=0.653 Sum_probs=64.7
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++||+++.||+|++++++|+++|++|+.+.++.. +..+++.+.||.| ++|+|+++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNG-EVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCC-CCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999864 3568899999998 99999999999999999999984
No 40
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.73 E-value=1.5e-17 Score=107.86 Aligned_cols=70 Identities=30% Similarity=0.445 Sum_probs=64.3
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++||+++.|+++++++++|+++|++|+.+.++.. ...+++.++||.| ++|+|+++|..|+||.||++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~-~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNG-RVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCC-CCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999988754 3567899999998 99999999999999999999984
No 41
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.73 E-value=2.2e-17 Score=111.24 Aligned_cols=71 Identities=34% Similarity=0.516 Sum_probs=66.3
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeC-CeeeeehHHHHHHHh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHD-KRVIVESFVFLEYID 75 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~-g~~l~es~aI~~yL~ 75 (227)
.++||+++.||+|++++++|+++|++|+.+.++.....+++.+.||.+ ++|+|+++ |..|+||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~~-~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQG-KVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCCC-CcCEEEECCCCEEECHHHHHHhhC
Confidence 689999999999999999999999999999998877667899999998 99999976 899999999999985
No 42
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.73 E-value=2.1e-17 Score=108.03 Aligned_cols=73 Identities=32% Similarity=0.522 Sum_probs=66.4
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~ 79 (227)
++||+++. +++++++++|+++|++|+.+.++.. ...+++.+.||.+ ++|+|+++|.+|+||.+|++||+++++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~-~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLG-KVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCC-CCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58999886 5899999999999999999998864 4678899999998 999999999999999999999999875
No 43
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.73 E-value=1.7e-17 Score=107.66 Aligned_cols=70 Identities=33% Similarity=0.469 Sum_probs=65.1
Q ss_pred eEEecccCChHHHHHHHHHHh--hCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKL--KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~--~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~ 75 (227)
++||+++.||+|+++|++|++ +|++|+.+.++...+.+++.+.||.| ++|+|+ +||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~-~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPLG-KIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCCC-CCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 89999999998777788999999998 999998 47899999999999985
No 44
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.72 E-value=2e-17 Score=106.76 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=61.3
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeC-CeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHD-KRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~-g~~l~es~aI~~yL~~ 76 (227)
|+||+++.||||+++|++|+++|++|+.+.++... .....+.+|.+ ++|+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~-~~~~~~~~~~~-~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD-EATPIRMIGAK-QVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc-hHHHHHhcCCC-ccCEEEeCCCeEeehHHHHHHHHhC
Confidence 58999999999999999999999999999887543 23445788987 99999975 8999999999999974
No 45
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.72 E-value=3.6e-17 Score=107.26 Aligned_cols=73 Identities=32% Similarity=0.453 Sum_probs=65.7
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEeC-CeeeeehHHHHHHHhhhCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVHD-KRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~~-g~~l~es~aI~~yL~~~~~ 79 (227)
|+||+++.+ ++++++++|+++|++|+.+.++..+ ..+++.++||.| ++|+|+++ |..++||.+|++||+++||
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~-~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKG-QVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCC-CCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999976 6999999999999999999988753 578999999998 99999986 8999999999999999875
No 46
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.71 E-value=3e-17 Score=106.63 Aligned_cols=70 Identities=34% Similarity=0.451 Sum_probs=63.7
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCCCceecEEEe-CCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPVHKKVPVLVH-DKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~g~~vP~L~~-~g~~l~es~aI~~yL~ 75 (227)
|+||+++.||+|+++|++|.++|++|+.+.++... ..+++.+.||.+ ++|+|++ ||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAG-TVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCC-CCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999999999999999999999999988642 467899999998 9999994 7889999999999985
No 47
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.71 E-value=4e-17 Score=105.85 Aligned_cols=70 Identities=36% Similarity=0.631 Sum_probs=64.8
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC---CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF---NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~---~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
|+||+++.|++|+++|++|+++|++|+.+.+++. ...+++.+.||.| ++|+|+++|.+++||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~-~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQG-LVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCC-CCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999874 3567899999998 99999999999999999999985
No 48
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.71 E-value=6.3e-17 Score=106.53 Aligned_cols=72 Identities=26% Similarity=0.279 Sum_probs=62.5
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhh-----CCCCceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLEL-----NPVHKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~-----~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
+++||+++.++.+++++++|+++|++|+.+.++.. +++.+. .|+| ++|+|++||.+|+||.||++||++++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~g-~vP~L~~~g~~l~ES~AI~~YL~~~~ 76 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMFQ-QVPMVEIDGMKLVQTRAILNYIAGKY 76 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCCC-CCCEEEECCEEEeeHHHHHHHHHHHc
Confidence 47999999999999999999999999999988753 233333 3587 99999999999999999999999998
Q ss_pred C
Q 046710 79 P 79 (227)
Q Consensus 79 ~ 79 (227)
+
T Consensus 77 ~ 77 (79)
T cd03077 77 N 77 (79)
T ss_pred C
Confidence 6
No 49
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.70 E-value=3.2e-16 Score=121.92 Aligned_cols=182 Identities=16% Similarity=0.287 Sum_probs=121.9
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh-------
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE------- 76 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~------- 76 (227)
+++||.+..||||-+||.+|.+.||+|++++|++-.+.+ .+-+.. ++||+|..+|..+.||.+|+.-|+.
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r~e--Ik~Ssy-kKVPil~~~Geqm~dSsvIIs~laTyLq~~~q 166 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLRQE--IKWSSY-KKVPILLIRGEQMVDSSVIISLLATYLQDKRQ 166 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhhhh--cccccc-ccccEEEeccceechhHHHHHHHHHHhccCCC
Confidence 689999999999999999999999999999999764333 233343 5999999888889999999887733
Q ss_pred -------hCCCCCC------------------CCC-----CHHHHHHHHHHHHHhhhhchHHHHHhhc------------
Q 046710 77 -------TWPQDPL------------------LPQ-----DPYEKAMARFWAKFGDEKLLESAYKAMW------------ 114 (227)
Q Consensus 77 -------~~~~~~l------------------~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (227)
.||.-.. +.+ +-..+.+-+.|-.|+++.+...+..-.+
T Consensus 167 ~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFew 246 (370)
T KOG3029|consen 167 DLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEW 246 (370)
T ss_pred CHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHH
Confidence 2230000 001 1112234456666666655433332111
Q ss_pred ----------------------------------cCchHHHHHHHHHHHHHHHHHHHh-CCCccccCCCCchhHHHHHhH
Q 046710 115 ----------------------------------SKGEEKQKAMKEAVESLEKIEEVL-GGKNFMGGNSIGYLDLAIGWI 159 (227)
Q Consensus 115 ----------------------------------~~~~~~~~~~~~l~~~l~~le~~L-~~~~~l~G~~~t~aD~~l~~~ 159 (227)
..........+.+.+.++.+-+.| ..++|+.|++|++||++++++
T Consensus 247 f~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGv 326 (370)
T KOG3029|consen 247 FSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGV 326 (370)
T ss_pred HHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhh
Confidence 001111223455666666666666 468999999999999999999
Q ss_pred HhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcC
Q 046710 160 GYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKH 194 (227)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 194 (227)
+..+.....+ .+. -...+|..|+.+|++.
T Consensus 327 l~sm~gc~af---kd~---~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 327 LRSMEGCQAF---KDC---LQNTSIGEWYYRMEAL 355 (370)
T ss_pred hhHhhhhhHH---HHH---HhcchHHHHHHHHHHH
Confidence 9988655443 233 2477899999999763
No 50
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.70 E-value=6.1e-17 Score=107.30 Aligned_cols=72 Identities=15% Similarity=0.164 Sum_probs=62.1
Q ss_pred EEecccCChHHHHHHHHHHhhCCCceEEEccCCC----CchhHHh-----hCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 6 KLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN----KSTELLE-----LNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 6 ~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~----~~~~~~~-----~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
+|||+..++.|+++|++|+++|++|+.+.+++.. ..+++.+ .+|+| +||+|++||.+|+||.||++||++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g-~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFP-NLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCC-CCCEEEECCEEEeehHHHHHHHhh
Confidence 7999999999999999999999999999998753 1234432 22998 999999999999999999999998
Q ss_pred hC
Q 046710 77 TW 78 (227)
Q Consensus 77 ~~ 78 (227)
++
T Consensus 81 ~~ 82 (82)
T cd03075 81 KH 82 (82)
T ss_pred cC
Confidence 64
No 51
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.69 E-value=1.3e-16 Score=104.05 Aligned_cols=67 Identities=22% Similarity=0.417 Sum_probs=61.3
Q ss_pred eEEeccc-------CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 5 VKLLGFW-------CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 5 ~~Ly~~~-------~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
++||+++ .||+|++++++|+++|++|+.+.++. .+.+|.| ++|+|+++|.+++||.+|++||+++
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-------~~~~p~g-~vPvl~~~g~~l~eS~~I~~yL~~~ 73 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL-------AKRSPKG-KLPFIELNGEKIADSELIIDHLEEK 73 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-------ccCCCCC-CCCEEEECCEEEcCHHHHHHHHHHH
Confidence 6999998 68999999999999999999988864 3688998 9999999999999999999999998
Q ss_pred CC
Q 046710 78 WP 79 (227)
Q Consensus 78 ~~ 79 (227)
|+
T Consensus 74 ~~ 75 (75)
T cd03080 74 YG 75 (75)
T ss_pred cC
Confidence 74
No 52
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.69 E-value=1.1e-16 Score=104.49 Aligned_cols=71 Identities=34% Similarity=0.426 Sum_probs=60.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC---CchhHHhhCCC-CceecEEEeC-CeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN---KSTELLELNPV-HKKVPVLVHD-KRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~---~~~~~~~~~p~-g~~vP~L~~~-g~~l~es~aI~~yL~~ 76 (227)
|+|++++.+++++++|++|+++|++|+.+.+++.. +.+++.+.||. | ++|+|+++ |.+|+||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g-~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFG-KVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSS-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccc-eeeEEEECCCCEEEcHHHHHHHhCC
Confidence 34555555569999999999999999999998742 45899999999 8 99999998 9999999999999985
No 53
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.69 E-value=1.1e-16 Score=104.95 Aligned_cols=72 Identities=24% Similarity=0.437 Sum_probs=62.5
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeC----CeeeeehHHHHHHHhhhC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHD----KRVIVESFVFLEYIDETW 78 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~----g~~l~es~aI~~yL~~~~ 78 (227)
+++||+++.||+|++++++|.++|++|+.+.+++... ++ ...+|.+ ++|+|+++ |.+|+||.+|++||+++.
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~-~~-~~~~~~~-~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVSR-KE-IKWSSYK-KVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchhH-HH-HHHhCCC-ccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 5899999999999999999999999999998875432 23 3569988 99999965 789999999999999874
No 54
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.69 E-value=1.2e-16 Score=102.75 Aligned_cols=65 Identities=49% Similarity=0.678 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHhhCCCceEEEccC----CCCchhHHhhCCCCceecEEEe-CCeeeeehHHHHHHHhhh
Q 046710 12 CSPFAFRVVWALKLKGVEFEYIEEDI----FNKSTELLELNPVHKKVPVLVH-DKRVIVESFVFLEYIDET 77 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~y~~~~v~~----~~~~~~~~~~~p~g~~vP~L~~-~g~~l~es~aI~~yL~~~ 77 (227)
.|||++|++++|+++|++|+...+.. .+..+++.++||.| +||+|++ +|.++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~-~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRG-KVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCe-EEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999988843 24568999999998 9999997 789999999999999874
No 55
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.68 E-value=1.1e-15 Score=118.27 Aligned_cols=177 Identities=19% Similarity=0.212 Sum_probs=126.3
Q ss_pred eEEeccc-------CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 5 VKLLGFW-------CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 5 ~~Ly~~~-------~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
+-||.++ .||||.++..+|...+||||.+.-.+. ..++.| ++|.++-||..+.+|..|..+|.+.
T Consensus 46 VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~~-------~rSr~G-~lPFIELNGe~iaDS~~I~~~L~~h 117 (281)
T KOG4244|consen 46 VYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSLK-------RRSRNG-TLPFIELNGEHIADSDLIEDRLRKH 117 (281)
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccce-------eeccCC-CcceEEeCCeeccccHHHHHHHHHH
Confidence 5677776 799999999999999999998866532 334557 9999999999999999999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHH----------------------------hhc-----------c---
Q 046710 78 WPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYK----------------------------AMW-----------S--- 115 (227)
Q Consensus 78 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~-----------~--- 115 (227)
+.-+.. -++.+++..+.+...++..+...+.. ++. .
T Consensus 118 f~~~~~--L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~ 195 (281)
T KOG4244|consen 118 FKIPDD--LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA 195 (281)
T ss_pred cCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 863221 24556666665555444333222111 110 0
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhc
Q 046710 116 -KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 116 -~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 193 (227)
..=...+..+-+.+-++.+++.|++.+|++|+++|-+|+.+|+.|.++.-.-...- -+++ .+.+|||..||+|+++
T Consensus 196 IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i-~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 196 IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHI-SDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcH-HHHH-hhhchHHHHHHHHHHH
Confidence 00112334556788899999999999999999999999999998887744101101 2233 4789999999999987
No 56
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.66 E-value=1.2e-15 Score=106.37 Aligned_cols=105 Identities=16% Similarity=0.241 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhH
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEE 168 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (227)
.+|++++.|+.++++.+.+.+..++...++..+...+.+.+.+..+|++|++++|++|+++|+|||++++.+.++.
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~---- 77 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLP---- 77 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHH----
Confidence 5799999999999998888876665544555667788899999999999999999999999999999999876552
Q ss_pred hcCCccccCCCcchHHHHHHHHHhcCcccccc
Q 046710 169 AGGSMRILDSQKFPAIAEWSTKFLKHPVIKEN 200 (227)
Q Consensus 169 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 200 (227)
..+ .++ .+.+|++.+|++++.++|+++.+
T Consensus 78 ~~~-~~~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 78 ALG-IEL--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HcC-CCC--cccchHHHHHHHHHHCCHHHHHh
Confidence 124 444 35799999999999999999864
No 57
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=2.1e-15 Score=109.89 Aligned_cols=178 Identities=17% Similarity=0.216 Sum_probs=122.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEE-eCCeeeeehHHHHHHHhhhCCCCCC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV-HDKRVIVESFVFLEYIDETWPQDPL 83 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~-~~g~~l~es~aI~~yL~~~~~~~~l 83 (227)
|+||-+.+||||-|+|+++-.+|||++.+...-.+......-+.. |+||+|+ +||..+.||..|.+|+++..+++-+
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~Tp~rmiG~--KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~l 78 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEETPIRMIGQ--KQVPILQKEDGRAMPESLDIVHYVDELDGKPLL 78 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccChhhhhcc--cccceEEccccccchhhhHHHHHHHHhcCchhh
Confidence 689999999999999999999999999998765542222222222 5899999 6899999999999999999874323
Q ss_pred CCCCHHHHHHHHHHHHHhhhhchHHHHHhhc-----------------cC-----------chHHHHHHHHHHHHHHHHH
Q 046710 84 LPQDPYEKAMARFWAKFGDEKLLESAYKAMW-----------------SK-----------GEEKQKAMKEAVESLEKIE 135 (227)
Q Consensus 84 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-----------~~~~~~~~~~l~~~l~~le 135 (227)
-+. -+-.+..|+.-+...........+. .. -..-.....++...++.++
T Consensus 79 t~~---~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~ 155 (215)
T COG2999 79 TGK---VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALD 155 (215)
T ss_pred ccC---cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHH
Confidence 222 1334555666555444333333221 00 0112344677788888999
Q ss_pred HHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 136 EVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
.++.+..-+- ..+|+=|+.+|++++.+-. ..| .+| =.++..|..++.+...+
T Consensus 156 ~Li~~~s~~n-~~l~~ddi~vFplLRnlt~---v~g-i~w-----ps~v~dy~~~msektqV 207 (215)
T COG2999 156 KLIVGPSAVN-GELSEDDILVFPLLRNLTL---VAG-IQW-----PSRVADYRDNMSEKTQV 207 (215)
T ss_pred HHhcCcchhc-cccchhhhhhhHHhcccee---ccc-CCC-----cHHHHHHHHHHHHhhCc
Confidence 9887765333 3699999999999988732 223 333 34899999999876544
No 58
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.3e-15 Score=118.42 Aligned_cols=194 Identities=18% Similarity=0.253 Sum_probs=141.5
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCC--ceEEEccCC--CCchhHHh----------------------hCC----CCce
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVE--FEYIEEDIF--NKSTELLE----------------------LNP----VHKK 53 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~--y~~~~v~~~--~~~~~~~~----------------------~~p----~g~~ 53 (227)
.+.||..-.|||++|..++=+.+|++ ..+..|++. .....|.. ..| .. +
T Consensus 51 RYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRv-T 129 (324)
T COG0435 51 RYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRV-T 129 (324)
T ss_pred eEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCce-e
Confidence 58999999999999999999999995 222223321 12222211 122 22 7
Q ss_pred ecEEEeC--Ceee-eehHHHHHHHhhhCC-----CCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHh-hccCchHHHHHH
Q 046710 54 VPVLVHD--KRVI-VESFVFLEYIDETWP-----QDPLLPQDPYEKAMARFWAKFGDEKLLESAYKA-MWSKGEEKQKAM 124 (227)
Q Consensus 54 vP~L~~~--g~~l-~es~aI~~yL~~~~~-----~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 124 (227)
||||.+. .+++ .||..|++-+...|. ...|+|.+. +.+++.+..++-+.+..-+.+. +....+.-+++.
T Consensus 130 VPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~L--r~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~ 207 (324)
T COG0435 130 VPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEAL--RTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAV 207 (324)
T ss_pred EEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHHH--HHHHHHHHhhhcccccCceeeecccchHHHHHHHH
Confidence 9999974 3444 599999999987663 234787754 8888988888877766555543 335566778888
Q ss_pred HHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHH--hHhcCCccccCCCcchHHHHHHHHHhcCccccccCC
Q 046710 125 KEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVW--EEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLP 202 (227)
Q Consensus 125 ~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~--~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 202 (227)
+.+.+.|+.+|+.|+++.|++|+++|-||+-+++.|-++..+ ..+ . .++-.-..||+|..|.+.+.+.|+++.+..
T Consensus 208 ~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHF-K-CN~~rI~dypnL~~yLr~LYq~pg~~~T~d 285 (324)
T COG0435 208 KKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHF-K-CNLRRIRDYPNLWGYLRDLYQLPGFAETVD 285 (324)
T ss_pred HHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeee-e-cccchhhcCchHHHHHHHHhcCcccccccc
Confidence 999999999999999999999999999999999988777432 111 1 222112449999999999999999999874
No 59
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.65 E-value=1e-15 Score=112.21 Aligned_cols=127 Identities=13% Similarity=0.185 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHh
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMW-SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWE 167 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (227)
..+++++.|++|..+.+.+.+..... .+++..+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++....
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHh
Confidence 35888999999999998888777643 45566677788999999999999999999999999999999999887663211
Q ss_pred -HhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHHHHHH
Q 046710 168 -EAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCHKRAE 216 (227)
Q Consensus 168 -~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 216 (227)
.... ......+.+|+|.+|++++.++|+++++........++++..++
T Consensus 83 ~~~~~-~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 83 VQHFK-CNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred hhhcc-cccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 1001 11111358999999999999999999999876667777666543
No 60
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.65 E-value=5.2e-16 Score=103.46 Aligned_cols=67 Identities=31% Similarity=0.497 Sum_probs=58.9
Q ss_pred cCChHHHHHHHHHHhhCCCceEEEccCCCC---chhHHhhCCCCceecEEEeC-CeeeeehHHHHHHHhhhCC
Q 046710 11 WCSPFAFRVVWALKLKGVEFEYIEEDIFNK---STELLELNPVHKKVPVLVHD-KRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 11 ~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~---~~~~~~~~p~g~~vP~L~~~-g~~l~es~aI~~yL~~~~~ 79 (227)
+.||+|+++|++|.++|++|+.+.++.... .+++ ++||.| ++|+|+++ |.+++||.+|++||+++||
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~-~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFY-TVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCc-eeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 689999999999999999999999886542 2334 789998 99999998 8999999999999999875
No 61
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.64 E-value=2.5e-15 Score=107.56 Aligned_cols=119 Identities=20% Similarity=0.300 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCC--CccccCCCCchhHHHHHhHHhHHHHHh
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGG--KNFMGGNSIGYLDLAIGWIGYWIPVWE 167 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (227)
+|++.+.|.++++ .+...+...+.. ++..++..+.+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++....
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~ 79 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALK 79 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHH
Confidence 5899999999997 446655665555 666778889999999999999985 899999999999999999988775433
Q ss_pred HhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHHH
Q 046710 168 EAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYCH 212 (227)
Q Consensus 168 ~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 212 (227)
...+ . ..+.+.+|+|++|++++.++|+++.++.+++...++++
T Consensus 80 ~~~~-~-~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 122 (124)
T cd03184 80 LLLG-Y-EFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLK 122 (124)
T ss_pred hhcc-c-cCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHh
Confidence 2111 1 11247899999999999999999999999988888765
No 62
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.64 E-value=2.7e-15 Score=105.93 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHhhc---cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHH
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYKAMW---SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWI 163 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (227)
||.+++.+++|+.+....+.+.+..... ...+..+.....+.+.++.+|+.|++++|++|+++|+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~ 82 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQF 82 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHH
Confidence 6889999999999999998888777544 1223466778899999999999999999999999999999999887665
Q ss_pred HHHhHhcCCccccCCCcchHHHHHHHHHhcCcccccc
Q 046710 164 PVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKEN 200 (227)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 200 (227)
... . ...++.+.+|+|.+|++++.++|+++++
T Consensus 83 ~~~----~-~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 83 AHV----D-PKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHh----h-hcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 322 1 1122247899999999999999999875
No 63
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.63 E-value=1.6e-15 Score=98.24 Aligned_cols=66 Identities=32% Similarity=0.491 Sum_probs=59.9
Q ss_pred cccCChHHHHHHHHHHhhCCCceEEEccCCC--CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 9 GFWCSPFAFRVVWALKLKGVEFEYIEEDIFN--KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 9 ~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~--~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
....|+++++++++|+++|++|+.+.++..+ ..+++.++||+| ++|+|+++|.+|+||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~g-~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPTG-KVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCCC-cCCEEEECCEEEEcHHHHHHHhC
Confidence 3568999999999999999999999998753 468899999998 99999999999999999999984
No 64
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.60 E-value=4.2e-15 Score=94.93 Aligned_cols=70 Identities=41% Similarity=0.586 Sum_probs=63.2
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCch-hHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKST-ELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~-~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++||+++.||+|++++++|+++|++|+.+.++...... ++.+.+|.+ ++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLG-KVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCCC-CCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999998664333 478899998 99999999999999999999985
No 65
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.59 E-value=9.5e-15 Score=102.74 Aligned_cols=104 Identities=19% Similarity=0.341 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhccC---------chHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMWSK---------GEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIG 160 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (227)
+|+++++|+.+..+.+.+.+...+... +...+...+.+.+.++.+|++|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 588999999999988888776544321 22234557789999999999999899999999999999999988
Q ss_pred hHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccC
Q 046710 161 YWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENL 201 (227)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 201 (227)
.++.. . + .+ .+.+|++.+|++++.++|++++++
T Consensus 82 ~~~~~---~-~-~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPG---V-G-LD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhh---c-C-CC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 77632 1 3 32 367999999999999999998753
No 66
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=9.4e-15 Score=112.66 Aligned_cols=194 Identities=21% Similarity=0.274 Sum_probs=137.7
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCC--ceEEEccC--CCCchhHHh------------------------------hCC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVE--FEYIEEDI--FNKSTELLE------------------------------LNP 49 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~--y~~~~v~~--~~~~~~~~~------------------------------~~p 49 (227)
.+.||..-.|||++|++++++.+|+. .-...+.. .+++..|.+ .+|
T Consensus 37 ryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p 116 (319)
T KOG2903|consen 37 RYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASP 116 (319)
T ss_pred eEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCC
Confidence 57899999999999999999999985 11112222 112222221 112
Q ss_pred ----CCceecEEEeCC---eeeeehHHHHHHHhhhC---------CCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHH-h
Q 046710 50 ----VHKKVPVLVHDK---RVIVESFVFLEYIDETW---------PQDPLLPQDPYEKAMARFWAKFGDEKLLESAYK-A 112 (227)
Q Consensus 50 ----~g~~vP~L~~~g---~~l~es~aI~~yL~~~~---------~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 112 (227)
.. +||||-|-. .+-.||..|++.+.+-| +.-.|+|.+. +++++.+-.|+.+.+..-+.+ -
T Consensus 117 ~Y~grf-TVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~L--~~~Ide~N~wvy~~INNGVYk~G 193 (319)
T KOG2903|consen 117 NYTGRF-TVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSSL--RAQIDETNSWVYDKINNGVYKCG 193 (319)
T ss_pred CCCceE-EEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHHH--HHHHhhhhceecccccCceeeec
Confidence 22 799999742 33469999999999322 2234677654 888998888887776555444 2
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHhCCCc--cccCCCCchhHHHHHhHHhHHHHHhH--h-cCCccccCCCcchHHHHH
Q 046710 113 MWSKGEEKQKAMKEAVESLEKIEEVLGGKN--FMGGNSIGYLDLAIGWIGYWIPVWEE--A-GGSMRILDSQKFPAIAEW 187 (227)
Q Consensus 113 ~~~~~~~~~~~~~~l~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~~~~~--~-~~~~~~~~~~~~p~l~~~ 187 (227)
+....+.-+...+.+.+.|+.+|++|+++. |++|+++|-||+.|++.+-++...-. + .. ...+ +++||+|..|
T Consensus 194 FA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn-~~~i-r~~Yp~l~~~ 271 (319)
T KOG2903|consen 194 FAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCN-KKTI-RDEYPNLHNW 271 (319)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecc-hhhh-hccCcHHHHH
Confidence 335566677888999999999999999876 99999999999999998777633210 0 01 1122 5789999999
Q ss_pred HHHHhc-CccccccCC
Q 046710 188 STKFLK-HPVIKENLP 202 (227)
Q Consensus 188 ~~~~~~-~p~~~~~~~ 202 (227)
.+.+-+ .|++..+..
T Consensus 272 lk~iY~~~~~~~~Ttd 287 (319)
T KOG2903|consen 272 LKNIYWNIPGFSSTTD 287 (319)
T ss_pred HHHHHhhccchhhccc
Confidence 999999 899998874
No 67
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.57 E-value=1.2e-14 Score=93.95 Aligned_cols=65 Identities=23% Similarity=0.347 Sum_probs=58.2
Q ss_pred eEEeccc-------CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 5 VKLLGFW-------CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 5 ~~Ly~~~-------~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
++||.++ .||+|++++++|+++|++|+.+.++... .+|.| ++|+|+++|..++||.+|++||+++
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~-------~~p~g-~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW-------RSPTG-KLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc-------cCCCc-ccCEEEECCEEEcCHHHHHHHHhhC
Confidence 3677777 8999999999999999999999987532 78988 9999999999999999999999874
No 68
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.56 E-value=8.4e-14 Score=98.46 Aligned_cols=104 Identities=16% Similarity=0.290 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHhhcc-------------CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhH
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYKAMWS-------------KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLD 153 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD 153 (227)
|+.+++++++|+.+++..+.+.+...+.. +....++....+.+.++.+|+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 46789999999999988877776654421 12334566788999999999999988999999999999
Q ss_pred HHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 154 LAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
|++++.+.+... . + .++ ...+|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~---~-~-~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKV---V-K-LRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHh---c-C-CCC--ccccHHHHHHHHHHHhccCC
Confidence 999999887632 2 4 444 46899999999999999974
No 69
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.56 E-value=5.1e-14 Score=101.07 Aligned_cols=107 Identities=10% Similarity=0.147 Sum_probs=84.3
Q ss_pred hhhchHHHHHhhcc-CchHHHHHHHHHHHHHHHHHHHhCC----------------CccccCCCCchhHHHHHhHHhHHH
Q 046710 102 DEKLLESAYKAMWS-KGEEKQKAMKEAVESLEKIEEVLGG----------------KNFMGGNSIGYLDLAIGWIGYWIP 164 (227)
Q Consensus 102 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~~----------------~~~l~G~~~t~aD~~l~~~l~~~~ 164 (227)
...+++.+..++.+ +.+..+...+.+.+.|+.||++|++ ++|++|+++|+|||++++.+.++.
T Consensus 8 ~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~ 87 (134)
T cd03198 8 GEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVK 87 (134)
T ss_pred HHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 34556666666664 4455667788999999999999986 679999999999999999988774
Q ss_pred HHhH-hcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHH
Q 046710 165 VWEE-AGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYC 211 (227)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 211 (227)
.... ..+ ..+ .+.+|+|.+|++++.+||++++++...+.|...+
T Consensus 88 ~~~~~~~g-~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~ 132 (134)
T cd03198 88 VVAKKYRN-FEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAY 132 (134)
T ss_pred HHHHhhcC-CCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHh
Confidence 3211 114 444 4789999999999999999999999988877654
No 70
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.55 E-value=1.2e-13 Score=98.08 Aligned_cols=103 Identities=19% Similarity=0.270 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHHHHhhhhchHHHHHhhc----cC-----------chHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Q 046710 85 PQDPYEKAMARFWAKFGDEKLLESAYKAMW----SK-----------GEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSI 149 (227)
Q Consensus 85 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~ 149 (227)
|.++.+++++++|+.+....+.+.+...+. .. ....+.....+.+.++.+|++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 568899999999999998888877653221 11 112233456789999999999999999999999
Q ss_pred chhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCc
Q 046710 150 GYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHP 195 (227)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 195 (227)
|+|||++++.+.++. .. + . +.+.+|+|.+|++++.++|
T Consensus 82 t~ADi~l~~~~~~~~---~~-~-~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAAL---AR-G-P---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHH---Hc-C-c---ccccCchHHHHHHHHhcCC
Confidence 999999998887763 21 3 2 2478999999999999986
No 71
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.54 E-value=1.2e-13 Score=98.35 Aligned_cols=106 Identities=13% Similarity=0.239 Sum_probs=81.0
Q ss_pred hhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCchhHHHHHhHHhHHHHH-hHhcCCccccCCC
Q 046710 102 DEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGG-KNFMGGNSIGYLDLAIGWIGYWIPVW-EEAGGSMRILDSQ 179 (227)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~ 179 (227)
...+++.+..++....+. ++..+.+.+.+..||++|++ ++|++|+++|+||+++++.+.++... ....+ ..+ .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~-~~~--~~ 86 (121)
T cd03201 11 GSKIFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKN-WSV--PE 86 (121)
T ss_pred HHHHHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcC-CCC--cc
Confidence 344466666666644433 55677899999999999985 79999999999999999988777532 11113 322 47
Q ss_pred cchHHHHHHHHHhcCccccccCCChhhHHHHH
Q 046710 180 KFPAIAEWSTKFLKHPVIKENLPPRDRTLAYC 211 (227)
Q Consensus 180 ~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 211 (227)
.+|+|.+|++++.++|+++++++..+++...+
T Consensus 87 ~~P~l~~w~~rl~~rps~~~t~~~~~~~~~~~ 118 (121)
T cd03201 87 SLTSVKSYMKALFSRESFVKTKAEKEDVIAGW 118 (121)
T ss_pred cchHHHHHHHHHHCCchhhhcCCCHHHHHHHh
Confidence 89999999999999999999999888765544
No 72
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.54 E-value=1.1e-13 Score=98.46 Aligned_cols=115 Identities=19% Similarity=0.274 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhC---CCccccCCCCchhHHHHHhHHhHH
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLG---GKNFMGGNSIGYLDLAIGWIGYWI 163 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~---~~~~l~G~~~t~aD~~l~~~l~~~ 163 (227)
|+.+|+.+++++.+... +...+..-+..+.. .+.+.+.++.+|+.|+ +++|++| ++|+|||++++.+.++
T Consensus 1 d~~~ra~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~ 73 (120)
T cd03203 1 DPAKREFADELLAYTDA-FTKALYSSLIKGDP-----SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERF 73 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCc-----hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHH
Confidence 46789999999988322 22222222111111 2244567777888776 5899999 9999999999998876
Q ss_pred HHH-hHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhhHHHHH
Q 046710 164 PVW-EEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDRTLAYC 211 (227)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 211 (227)
... ....+ .++ .+.+|+|.+|++++.++|+++++.++.+.+.+.+
T Consensus 74 ~~~~~~~~~-~~~--~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 74 QIFLSELFN-YDI--TEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHhcC-ccc--cccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 432 12235 555 4689999999999999999999999888776654
No 73
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.54 E-value=3.9e-14 Score=100.85 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhc----c--C--chHH-HHHHHHHHHHHHHHHHHhC--CCccccCCCCchhHHHHH
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMW----S--K--GEEK-QKAMKEAVESLEKIEEVLG--GKNFMGGNSIGYLDLAIG 157 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~--~~~~-~~~~~~l~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~ 157 (227)
.+++++++|+.++.+.+.+.+...+. . . ++.. +...+.+.+.++.+|++|+ +++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 57899999999998887754322211 1 1 1111 2234668899999999997 458999999999999999
Q ss_pred hHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCCh
Q 046710 158 WIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPR 204 (227)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 204 (227)
+.+.+... . + .+ .+.+|+|.+|++++.++|+++++++.+
T Consensus 82 ~~~~~~~~---~-~-~~---~~~~p~l~~w~~~~~~~p~~~~~~~~~ 120 (121)
T cd03191 82 PQVYNARR---F-G-VD---LSPYPTIARINEACLELPAFQAAHPDN 120 (121)
T ss_pred HHHHHHHH---h-C-CC---cccCcHHHHHHHHHHhChhHHHhCcCc
Confidence 98876532 2 4 33 378999999999999999999987654
No 74
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=5.9e-14 Score=99.32 Aligned_cols=106 Identities=15% Similarity=0.229 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhh----c-------cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHh
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAM----W-------SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGW 158 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~ 158 (227)
+++++.+|+.+....+.+.+.... . .+....+...+.+.+.++.+|++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 578899999988877766554421 1 12233345678899999999999999999999999999999999
Q ss_pred HHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccC
Q 046710 159 IGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENL 201 (227)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 201 (227)
.+.++.. ... ... .+.+|++.+|++++.++|++++++
T Consensus 82 ~~~~~~~---~~~-~~~--~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMA---TPF-AKL--FDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHH---ccc-hhh--hhcCchHHHHHHHHHhCHHHHhhC
Confidence 8877632 111 112 367999999999999999998753
No 75
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.52 E-value=3.7e-14 Score=99.68 Aligned_cols=105 Identities=18% Similarity=0.243 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc-------cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW-------SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYW 162 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 162 (227)
+++++++|+.+.+..+.+.+..++. ..+...+...+.+.+.++.+|+.|++++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 4788999999998887776543321 123345566788999999999999999999999999999999998887
Q ss_pred HHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccC
Q 046710 163 IPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENL 201 (227)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 201 (227)
.... + ... ...+|++.+|++++.++|++++++
T Consensus 81 ~~~~----~-~~~--~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWI----G-IDD--LDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhc----c-ccc--hhhchHHHHHHHHHhhCHHHHHhc
Confidence 7322 3 332 467999999999999999998864
No 76
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.51 E-value=1.3e-13 Score=97.81 Aligned_cols=105 Identities=16% Similarity=0.312 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc----cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW----SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPV 165 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~ 165 (227)
+++++++|+.+....+.+.+...+. ..+...+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++..
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~ 81 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA 81 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH
Confidence 5788999999987777766554432 223455667888999999999999988999999999999999999888742
Q ss_pred HhHhcCCccccCCCcchHHHHHHHHHhcCccccccC
Q 046710 166 WEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENL 201 (227)
Q Consensus 166 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 201 (227)
. . + .+ .+.+|+|.+|++++.++|++++..
T Consensus 82 ~--~-~-~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 82 L--L-P-LD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred h--c-C-CC---hhhCchHHHHHHHHHcccchHHHH
Confidence 1 1 3 22 357999999999999999999854
No 77
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.51 E-value=1.4e-13 Score=98.00 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhccC--chHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHh
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMWSK--GEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWE 167 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (227)
++++++.+++.+.+. ...+..++... ....+.....+.+.+..+|++|++++|++|+++|+||+++++.+.++..
T Consensus 2 e~~~id~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~-- 78 (121)
T cd03209 2 ERIRVDMLEQQAMDL-RMGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRI-- 78 (121)
T ss_pred chHHHHHHHHHHHHH-HHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHH--
Confidence 577888888887776 44444443321 2333445677889999999999989999999999999999998888742
Q ss_pred HhcCCccccCCCcchHHHHHHHHHhcCccccccCCChhh
Q 046710 168 EAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRDR 206 (227)
Q Consensus 168 ~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 206 (227)
. . ... .+.+|+|.+|++++.++|+++++++++..
T Consensus 79 -~-~-~~~--~~~~P~l~~~~~rv~~~p~vk~~~~~~~~ 112 (121)
T cd03209 79 -F-E-PDC--LDAFPNLKDFLERFEALPKISAYMKSDRF 112 (121)
T ss_pred -h-C-ccc--cccChHHHHHHHHHHHCHHHHHHHhcccC
Confidence 2 2 222 36899999999999999999999877654
No 78
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.50 E-value=3.4e-13 Score=94.14 Aligned_cols=100 Identities=16% Similarity=0.400 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc----c-----CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW----S-----KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIG 160 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (227)
+|+++++|+.+..+.+.+.+...+. . .....+...+.+.+.++.+|++|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 4788999999998888887655322 1 122334567889999999999999999999999999999999887
Q ss_pred hHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 161 YWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
.... .. + . +...+|+|.+|++++.++|++
T Consensus 82 ~~~~---~~-~-~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWF---EL-P-I---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHH---Hc-c-c---ccccCchHHHHHHHHHhCCCC
Confidence 5431 21 2 2 147899999999999999975
No 79
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.49 E-value=1.4e-13 Score=98.14 Aligned_cols=111 Identities=17% Similarity=0.275 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc-------cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW-------SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYW 162 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 162 (227)
++++++.|+.+++..+.+.+...+. .+....+...+.+.+.++.+|+.|++++|++|+++|+||+++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 3788999999998888877654433 122345566788999999999999999999999999999999998887
Q ss_pred HHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 163 IPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
.... ..+ ..+ .+.+|++.+|++++.++|++++++.+.+
T Consensus 81 ~~~~--~~~-~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 81 GFTY--VFD-KEW--RAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHH--HcC-HHH--HHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 6322 112 222 3679999999999999999999887654
No 80
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.47 E-value=2.5e-13 Score=97.49 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhcc-CchHHHHHHHHHHHHHHHHHHHhCC---CccccCCCCchhHHHHHhHHhHHH
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMWS-KGEEKQKAMKEAVESLEKIEEVLGG---KNFMGGNSIGYLDLAIGWIGYWIP 164 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~ 164 (227)
.|+++++.+++.+.+. ...+...+.. .....+...+.+.+.+..+|+.|++ ++|++|+++|+||+++++.+.++.
T Consensus 2 ~e~~~vd~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~ 80 (126)
T cd03210 2 KEAALIDMVNDGVEDL-RLKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHL 80 (126)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHH
Confidence 3677888888877665 4444443332 2334455677788999999999974 589999999999999999888774
Q ss_pred HHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 165 VWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
.. . ... .+.+|+|.+|++++.++|++++++..+.
T Consensus 81 ~~----~-~~~--~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 81 VL----A-PGC--LDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred Hh----C-hHh--hhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 22 2 222 3689999999999999999999876543
No 81
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.47 E-value=3.5e-13 Score=91.96 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=74.9
Q ss_pred HHHHhhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCc
Q 046710 71 LEYIDETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIG 150 (227)
Q Consensus 71 ~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t 150 (227)
++||++.- .++|.++.+.++++.|++.....+.. ...+.+.+.++.+|++|++++|++|+++|
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~--------------~~~~~~~~~l~~le~~L~~~~fl~Gd~~t 63 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE--------------GSSKEKAAVLRALNSALGRSPWLVGSEFT 63 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHHHHcCCCccCCCCCC
Confidence 47888883 39999999999999999976544220 13345567888999999999999999999
Q ss_pred hhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhc
Q 046710 151 YLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 193 (227)
+|||++++.+.+. + .. .+.+|+|.+|++++.+
T Consensus 64 iADi~l~~~l~~~-------~-~~---~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 64 VADIVSWCALLQT-------G-LA---SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHc-------c-cc---cccChHHHHHHHHHHh
Confidence 9999999886542 2 22 2679999999999975
No 82
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.47 E-value=4.5e-13 Score=97.49 Aligned_cols=109 Identities=20% Similarity=0.272 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHH-----HHHHHHHHHHHHHHhC--CCccccCCCCchhHHHHHhHHh
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKA-----MKEAVESLEKIEEVLG--GKNFMGGNSIGYLDLAIGWIGY 161 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~ 161 (227)
.+.++++.+++.+.+.... +..+....++...+. .+.+.+.++.||++|+ +++|++|+++|+||+++++.+.
T Consensus 2 ~e~a~iD~i~~~v~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~ 80 (137)
T cd03208 2 KERALIDMYVEGTADLMEM-ILMLPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAIL 80 (137)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHH
Confidence 3678888888888777443 334444333333222 2345789999999998 6789999999999999999988
Q ss_pred HHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCCChh
Q 046710 162 WIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLPPRD 205 (227)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 205 (227)
++... . ... .+.+|+|.+|++++.++|++++++..+.
T Consensus 81 ~~~~~----~-~~~--l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 81 MVEEL----D-PSL--LSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHHh----c-hhh--hccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 87322 2 222 3689999999999999999999887544
No 83
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.42 E-value=9.6e-13 Score=94.33 Aligned_cols=104 Identities=23% Similarity=0.294 Sum_probs=75.9
Q ss_pred HHHHHHHHHHhhhhchHHHHHh---------hc---cCchHHHHHHHHHHHHHHHHHHH-hCCCccccCCCCchhHHHHH
Q 046710 91 KAMARFWAKFGDEKLLESAYKA---------MW---SKGEEKQKAMKEAVESLEKIEEV-LGGKNFMGGNSIGYLDLAIG 157 (227)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~l~~~l~~le~~-L~~~~~l~G~~~t~aD~~l~ 157 (227)
++++++|+.+....+.+.+... +. ..++..+...+.+.+.++.+|++ +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 5667888887776665543221 11 12334455677889999999997 55578999999999999999
Q ss_pred hHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhc--CccccccC
Q 046710 158 WIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLK--HPVIKENL 201 (227)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~ 201 (227)
+.+.+... . + .+. .+.+|+|.+|++++.+ +|+++...
T Consensus 82 ~~~~~~~~---~-~-~~~--~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 82 CEIMQPEA---A-G-YDV--FEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHh---c-C-Ccc--cccCchHHHHHHHHHHhcchhHHHHH
Confidence 88766532 1 4 443 4789999999999999 89998744
No 84
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=5.1e-13 Score=92.31 Aligned_cols=97 Identities=13% Similarity=0.222 Sum_probs=72.8
Q ss_pred HHHHhhhhchHHHHHhhcc-CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccc
Q 046710 97 WAKFGDEKLLESAYKAMWS-KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRI 175 (227)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~ 175 (227)
|+.+....+.+.+...+.. .++..+.....+.+.++.+|++|++++|++|+++|+|||++++.+.+.. .. + .
T Consensus 4 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~---~~-~---~ 76 (103)
T cd03207 4 WLFFYAGVVEPALIAKAMGIEEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGL---QF-G---L 76 (103)
T ss_pred eeeeccccccHHHHHHHcCCCcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHH---Hc-C---C
Confidence 4444444444444333221 2334556678899999999999999999999999999999999988873 22 2 1
Q ss_pred cCCCcchHHHHHHHHHhcCccccccCC
Q 046710 176 LDSQKFPAIAEWSTKFLKHPVIKENLP 202 (227)
Q Consensus 176 ~~~~~~p~l~~~~~~~~~~p~~~~~~~ 202 (227)
.+.+|+|.+|++++.++|++++++.
T Consensus 77 --~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 77 --LPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred --CCCChHHHHHHHHHHcCHHHHHHhc
Confidence 3679999999999999999988764
No 85
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=2.2e-12 Score=88.67 Aligned_cols=71 Identities=25% Similarity=0.423 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 119 EKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 119 ~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
..++....+.+.++.+|+.|++++|++|+++|+||+++++++.+. ... + .. .+.+|+|.+|++++.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~---~~~-~-~~---~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALA---PEG-G-VD---LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHH---hcc-C-CC---hhhCcHHHHHHHHHHhCcCC
Confidence 455678899999999999999999999999999999999887654 111 2 22 36799999999999999975
No 86
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=2.7e-12 Score=90.45 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHhh-----cc--CchHHHHHHHHHHHHHHHHHHHhC-CCccccCCCCchhHHHHHhHH
Q 046710 89 YEKAMARFWAKFGDEKLLESAYKAM-----WS--KGEEKQKAMKEAVESLEKIEEVLG-GKNFMGGNSIGYLDLAIGWIG 160 (227)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~l~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l 160 (227)
.++++++.|+.++.+.+.+...... .. .+...+...+.+.+.+..+|.+|+ +++|++| ++|+||+++++++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALML 80 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHH
Confidence 5799999999999999887532111 11 112445667888999999999995 5589999 5999999999999
Q ss_pred hHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccCC
Q 046710 161 YWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENLP 202 (227)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 202 (227)
.++.. . | .++ + |++.+|++++.++|++++.++
T Consensus 81 ~~~~~---~-g-~~l---~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 81 NRLVL---N-G-DPV---P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHH---c-C-CCC---C--HHHHHHHHHHHCCHHHHHHHh
Confidence 88732 2 6 554 2 999999999999999998764
No 87
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.36 E-value=4.3e-12 Score=86.26 Aligned_cols=71 Identities=24% Similarity=0.454 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCc
Q 046710 119 EKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHP 195 (227)
Q Consensus 119 ~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 195 (227)
..+...+.+.+.+..+|+.|++++|++|+++|+||+++++.+.++... + .... .+.+|+|.+|++++.++|
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~-~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL----G-PDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----T-TTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----C-CCcc-cccCHHHHHHHHHHHcCC
Confidence 455668888999999999999999999999999999999999988443 3 3331 278999999999999987
No 88
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.33 E-value=6.7e-12 Score=80.22 Aligned_cols=68 Identities=15% Similarity=0.329 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHH
Q 046710 118 EEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTK 190 (227)
Q Consensus 118 ~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 190 (227)
+..++..+.+.+.++.+|++|++++|++|++||+||+++++.+.++..... + .++ ...+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~-~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--D-FDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--T-CCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--C-cCc--cccCHHHHHHHhC
Confidence 346778899999999999999999999999999999999999999865522 2 333 4889999999986
No 89
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=9.2e-12 Score=86.12 Aligned_cols=95 Identities=19% Similarity=0.286 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc---------cCchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW---------SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIG 160 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (227)
+|+++++|+.+..+.+.+.+..... .+++..+...+++.+.++.+|+.|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 5789999999987777766543211 2234556778889999999999999889999999999999999998
Q ss_pred hHHHHHhHhcCCccccCCCcchHHHHHHHHHh
Q 046710 161 YWIPVWEEAGGSMRILDSQKFPAIAEWSTKFL 192 (227)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 192 (227)
.++.. . + .+ ...+|++.+|+++++
T Consensus 82 ~~~~~---~-~-~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADE---G-G-FD---LADYPAIRAWLARIE 105 (105)
T ss_pred Hhccc---c-C-CC---hHhCccHHHHHHhhC
Confidence 88732 1 3 33 367999999999874
No 90
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.29 E-value=1.2e-11 Score=79.39 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=49.4
Q ss_pred cCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 11 WCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 11 ~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
+.+++|.+++++|++.|+||+.+... . . ...+|.| +||+|++||.+|+||.+|+.||.++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~~--~--~--~~~~P~G-kVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCRA--N--A--EFMSPSG-KVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEecC--C--c--cccCCCC-cccEEEECCEEEeCHHHHHHHHhcC
Confidence 35678999999999999999988432 1 1 1256777 9999999999999999999999864
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.27 E-value=2.8e-11 Score=84.30 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCC----------ccccCCCCchhHHHHHhHHhHHHHHhHhcCCccc--cCCCcchHHH
Q 046710 118 EEKQKAMKEAVESLEKIEEVLGGK----------NFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRI--LDSQKFPAIA 185 (227)
Q Consensus 118 ~~~~~~~~~l~~~l~~le~~L~~~----------~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~--~~~~~~p~l~ 185 (227)
+..++....+...++.+|++|+++ +|++|+++|+|||++++.+.++... + .+. +....+|+|.
T Consensus 25 ~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~-~~~~~~~~~~~P~l~ 99 (111)
T cd03204 25 EYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----G-LSRRYWGNGKRPNLE 99 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----C-ccccccccccChHHH
Confidence 344667888999999999999764 4999999999999999999887432 2 221 0125799999
Q ss_pred HHHHHHhcCccc
Q 046710 186 EWSTKFLKHPVI 197 (227)
Q Consensus 186 ~~~~~~~~~p~~ 197 (227)
+|++++.++|++
T Consensus 100 ~w~~rv~aRpsf 111 (111)
T cd03204 100 AYFERVLQRESF 111 (111)
T ss_pred HHHHHHHcCCCC
Confidence 999999999985
No 92
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.21 E-value=7.1e-11 Score=83.17 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh---CCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCc
Q 046710 119 EKQKAMKEAVESLEKIEEVL---GGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHP 195 (227)
Q Consensus 119 ~~~~~~~~l~~~l~~le~~L---~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 195 (227)
..+...+.+.+.++.+|.++ ++++|++|+ +|+||+++++++.+.. .. + .+. .|+|.+|++++.++|
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~---~~-~-~~~-----~P~l~~~~~rv~~rP 106 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFR---TY-G-LPL-----SPAAQAYVDALLAHP 106 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHH---Hc-C-CCC-----CHHHHHHHHHHHCCH
Confidence 34455666666777777766 467899999 9999999999888773 22 4 332 399999999999999
Q ss_pred cccccCC
Q 046710 196 VIKENLP 202 (227)
Q Consensus 196 ~~~~~~~ 202 (227)
+++++++
T Consensus 107 sv~~~~~ 113 (114)
T cd03194 107 AMQEWIA 113 (114)
T ss_pred HHHHHHh
Confidence 9998764
No 93
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.20 E-value=1.2e-10 Score=80.53 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhcc------CchHHHHHHHHHHHHHHHHHHHhCC--CccccCCCCchhHHHHHhHHh
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMWS------KGEEKQKAMKEAVESLEKIEEVLGG--KNFMGGNSIGYLDLAIGWIGY 161 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~ 161 (227)
++++++.+++..++. ...+.+.+.. .++......+.+.+.++.+|++|++ ++|++|+++|+||+++++.+.
T Consensus 2 e~~~v~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIADL-RAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 577888888886665 4444444442 2445556678889999999999987 899999999999999999998
Q ss_pred HHHHHhHhcCCccccCCCcchHHHHHHHHH
Q 046710 162 WIPVWEEAGGSMRILDSQKFPAIAEWSTKF 191 (227)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 191 (227)
++... + ... ..+.+|++.+|++++
T Consensus 81 ~~~~~----~-~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYL----D-PKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHhh----C-chh-hHHhChhHHHHHHhC
Confidence 87432 2 221 036799999999875
No 94
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.19 E-value=4.3e-11 Score=82.09 Aligned_cols=96 Identities=17% Similarity=0.295 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCc--cccCCCCchhHHHHHhHHhHHH
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKN--FMGGNSIGYLDLAIGWIGYWIP 164 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~ 164 (227)
++..++.+++|+++.. ............+...+...+.+.+.+..+|++|+.++ |++|++||+||+++++.+..+.
T Consensus 2 ~~~~~a~i~~W~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~ 79 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV--AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLR 79 (99)
T ss_dssp --TTHHHHHHHHH-GH--CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccc--hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHh
Confidence 3456777888888441 00000000112234556668889999999999998766 9999999999999999886652
Q ss_pred HHhHhcCCccccCCCcchHHHHHHHHHhc
Q 046710 165 VWEEAGGSMRILDSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 165 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 193 (227)
. .++ .+.+|+|.+|+++|++
T Consensus 80 ------~-~~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 80 ------W-ADF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp ------C-CHH--TTTCHHHHHHHHHHHT
T ss_pred ------h-ccc--ccccHHHHHHHHhhcC
Confidence 2 211 1589999999999974
No 95
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.18 E-value=8.9e-11 Score=80.03 Aligned_cols=92 Identities=18% Similarity=0.444 Sum_probs=68.4
Q ss_pred HHHHHHhhhhchHHHHHhhcc-------CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHh
Q 046710 95 RFWAKFGDEKLLESAYKAMWS-------KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWE 167 (227)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (227)
+.|+.+..+.+...+...... .++..+...+.+.+.++.+|++|++++|++|+++|+||+++++++.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 356666666555555544331 2455666788899999999999999999999999999999999999985432
Q ss_pred HhcCCccccCCCcchHHHHHHHHH
Q 046710 168 EAGGSMRILDSQKFPAIAEWSTKF 191 (227)
Q Consensus 168 ~~~~~~~~~~~~~~p~l~~~~~~~ 191 (227)
.. ..+ .+.+|++.+|++++
T Consensus 82 ~~---~~~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PL---LGL--LDEYPRLAAWYDRL 100 (100)
T ss_pred hh---hhh--hccCccHHHHHHhC
Confidence 21 112 36799999999875
No 96
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.18 E-value=1.4e-10 Score=76.16 Aligned_cols=72 Identities=22% Similarity=0.212 Sum_probs=63.2
Q ss_pred CceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 3 TKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 3 ~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++++||+.+.||+|.+++.+|...|++|+.+.++-......+...++.. ++|++..||..+.++..|.+||+
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~~-~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGAT-TVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCCC-CcCeEEECCEEEcCHHHHHHHhC
Confidence 3799999999999999999999999999999887554455666677765 89999999999999999999984
No 97
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=2e-09 Score=80.76 Aligned_cols=169 Identities=15% Similarity=0.178 Sum_probs=122.1
Q ss_pred ChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCCCC-CCCHHHH
Q 046710 13 SPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDPLL-PQDPYEK 91 (227)
Q Consensus 13 s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~l~-p~~~~~~ 91 (227)
..-|..|..+|..+++||.++.-+-. +| .+|-| ++|.|..+.+.++|=.+|..++..+.- .|. .-+..++
T Consensus 34 ~ascLAVqtfLrMcnLPf~v~~~~Na----ef--mSP~G-~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE~qk 104 (257)
T KOG3027|consen 34 NASCLAVQTFLRMCNLPFNVRQRANA----EF--MSPGG-KVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSEDQK 104 (257)
T ss_pred chhHHHHHHHHHHcCCCceeeecCCc----cc--cCCCC-CCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhhHHH
Confidence 34578999999999999998864321 12 34656 999999999999999999999998853 121 1366788
Q ss_pred HHHHHHHHHhhhhchHHHHHhhc-------------------------------------------cCchHHHHHHHHHH
Q 046710 92 AMARFWAKFGDEKLLESAYKAMW-------------------------------------------SKGEEKQKAMKEAV 128 (227)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~l~ 128 (227)
+.++..++.++..+... -.++. .+....+...++..
T Consensus 105 admra~vslVen~~t~a-El~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vd 183 (257)
T KOG3027|consen 105 ADMRAYVSLVENLLTTA-ELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVD 183 (257)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHH
Confidence 88888887776554221 11000 12334456677888
Q ss_pred HHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccC-CCcchHHHHHHHHHhc
Q 046710 129 ESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILD-SQKFPAIAEWSTKFLK 193 (227)
Q Consensus 129 ~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~-~~~~p~l~~~~~~~~~ 193 (227)
..++.|+..|++.+||.|++||-+|..+|+.+..+.+. .... .++-. ...|+||-++++|+.+
T Consensus 184 kc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt-~Lpn-~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 184 KCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTT-RLPN-MELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhh-cCCc-HHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999977776543 1111 22100 3679999999999976
No 98
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.15 E-value=1.7e-10 Score=82.42 Aligned_cols=69 Identities=19% Similarity=0.362 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcC
Q 046710 120 KQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKH 194 (227)
Q Consensus 120 ~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 194 (227)
.+...+.+.+.++.+|++|++++|+.|++||+||+++++.+.+... ..+ .++ .+.+|+|.+|++++.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~---~~~-~~~--~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARI---VSP-FPL--LEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHH---cCc-ccc--cccCChHHHHHHHHhcC
Confidence 4567888999999999999999999999999999999999888742 224 443 47899999999999763
No 99
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.11 E-value=2.4e-10 Score=76.58 Aligned_cols=68 Identities=19% Similarity=0.212 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCcc-c-cCCCcchHHHHHHHHHh
Q 046710 122 KAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMR-I-LDSQKFPAIAEWSTKFL 192 (227)
Q Consensus 122 ~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~-~-~~~~~~p~l~~~~~~~~ 192 (227)
+..+.+.+.++.+|+.|++++|++|+++|+|||++++.+.++... .. + .. . .+.+.+|+|.+|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~~-~-~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYA-PL-P-NSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-CC-C-ChHHHHHHHhCcHHHHHHHHhC
Confidence 567788999999999999999999999999999999998877421 01 1 10 0 01357999999999873
No 100
>PRK10638 glutaredoxin 3; Provisional
Probab=99.10 E-value=5.4e-10 Score=74.06 Aligned_cols=73 Identities=25% Similarity=0.225 Sum_probs=63.2
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
|+ +++||+.+.||||++++.+|..+|++|+.+.++... ..+++.+.++.. ++|++..||..+...-.+..+-.
T Consensus 1 m~-~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~-~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 1 MA-NVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRT-TVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CC-cEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCC-CcCEEEECCEEEeCHHHHHHHHH
Confidence 66 799999999999999999999999999999987553 456788899987 99999999999988877776543
No 101
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.07 E-value=1.7e-08 Score=80.65 Aligned_cols=172 Identities=15% Similarity=0.192 Sum_probs=120.0
Q ss_pred CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEe-CCeeeeehHHHHHHHhhhCCCCCCCCC-CHH
Q 046710 12 CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVH-DKRVIVESFVFLEYIDETWPQDPLLPQ-DPY 89 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~-~g~~l~es~aI~~yL~~~~~~~~l~p~-~~~ 89 (227)
.++-|..+.+++..++-|.+++..+-... .|.| ++|+|+. +|+.++.-.-|..+|...-.+..+-+. ...
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN~~~-------s~sg-~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~k 87 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSNPWR-------SPSG-KLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAK 87 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecCCCC-------CCCC-CCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHH
Confidence 56789999999999996666655443222 3557 8999996 569999999999999883222123222 256
Q ss_pred HHHHHHHHHHHhhhhchHHHHHhhc-------------------------------------------cCchHHHHHHHH
Q 046710 90 EKAMARFWAKFGDEKLLESAYKAMW-------------------------------------------SKGEEKQKAMKE 126 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~ 126 (227)
+++....++.+....+.++...-++ ...+..++....
T Consensus 88 q~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~ 167 (313)
T KOG3028|consen 88 QLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKD 167 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHH
Confidence 7788888888888877766554221 111123444566
Q ss_pred HHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCcccc-CCCcchHHHHHHHHHhc
Q 046710 127 AVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRIL-DSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 127 l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~-~~~~~p~l~~~~~~~~~ 193 (227)
..+.+..+.+.|++..|++||+||..|+.++..+..+-.. .. +...+. ....++||.++++++.+
T Consensus 168 Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~-~L-p~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 168 ASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQV-AL-PNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhc-cC-CchhHHHHHHhcchHHHHHHHHHH
Confidence 7788999999999999999999999999999988774221 11 101110 01349999999999987
No 102
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=99.02 E-value=2.2e-09 Score=69.11 Aligned_cols=71 Identities=24% Similarity=0.210 Sum_probs=60.6
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
+++||+.+.||+|.+++-+|...|++|+.+.++.......+....... ++|++..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~~-~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGAM-TVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCCC-CcCeEEECCEEEeCHHHHHHHhC
Confidence 589999999999999999999999999999887544334455555655 89999999999999999999984
No 103
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.97 E-value=4e-09 Score=67.96 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=49.6
Q ss_pred CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 12 CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
.||+|.++.++|..+|++|+.+...- ...+|.| ++|+|+++|..+.+|..|++||.++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n-------~~~sp~g-kLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNN-------PWRSPTG-KLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCC-------CCCCCCC-ccCEEEECCEEecChHHHHHHHHHc
Confidence 67999999999999999998875432 1234777 9999999999999999999999875
No 104
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.80 E-value=3.8e-08 Score=67.21 Aligned_cols=68 Identities=15% Similarity=0.268 Sum_probs=53.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHH
Q 046710 116 KGEEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKF 191 (227)
Q Consensus 116 ~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 191 (227)
.++..+.....+.+.++.+|++|++++| +++|+|||++++.+.+.... ..+ ... .+.+|+|.+|++++
T Consensus 31 ~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~--~~~-~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 31 SQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFR--HPD-LDW--RAAHPALAAWYARF 98 (98)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhH--ccC-cch--hhhChHHHHHHHhC
Confidence 3445566788899999999999998888 89999999999999887422 112 222 46899999999875
No 105
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.78 E-value=1.5e-08 Score=72.59 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHH-hHhcCCccccCCCcchHHHHHHHHH
Q 046710 118 EEKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVW-EEAGGSMRILDSQKFPAIAEWSTKF 191 (227)
Q Consensus 118 ~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~ 191 (227)
...++....+.+.++.+++.|++++|++|++||.+|+++++.+..+... .+... .... ...+|||.+|++||
T Consensus 53 ~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~-l~~~-~~~~pnL~~y~~Ri 125 (126)
T cd03211 53 KTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDE-LAEK-VKKYSNLLAFCRRI 125 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChH-HHHH-HHhCcHHHHHHHhc
Confidence 3556778888999999999999999999999999999999988777422 00001 1111 36799999999997
No 106
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.76 E-value=6.5e-08 Score=70.35 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=66.9
Q ss_pred eeeeehHHHHHHHhhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHH-HHHhCC
Q 046710 62 RVIVESFVFLEYIDETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKI-EEVLGG 140 (227)
Q Consensus 62 ~~l~es~aI~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~ 140 (227)
.+..|+..-..|+..... + + ..++..+ .+.....+-.+...+.......+...+.|.+.++.+ +...++
T Consensus 29 rt~~ea~~~f~yi~~~~~---f-~--~~er~~~----~~~Ga~aM~~isk~lkk~~~i~~D~r~~L~~a~~~w~~~~~~~ 98 (149)
T cd03197 29 RTWSEALASFDYITPSGY---F-G--YWEKFFA----KYVGAAAMYLISKYLKKPRLLQDDVREWLYDALNTWVAALGKD 98 (149)
T ss_pred CCHHHHHHhhhhHhcCCC---c-c--HHHHHHH----HHhhHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHhcCC
Confidence 456778888888876432 2 1 2233222 222222222222222222222233344454444433 444456
Q ss_pred CccccCCCCchhHHHHHhHHhHHHHHhHhcCCc-cccCCCcchHHHHHHHHHhc
Q 046710 141 KNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSM-RILDSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 141 ~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~ 193 (227)
++|++|++||+||+++++.+..+. .+.+ . ++ ..+|+|.+|+++|.+
T Consensus 99 ~~FlaGd~ptIADisvyg~l~s~e---~~~~-~~Dl---~~~p~I~~W~eRm~~ 145 (149)
T cd03197 99 RQFHGGSKPNLADLAVYGVLRSVE---GHPA-FKDM---VEETKIGEWYERMDA 145 (149)
T ss_pred CCccCCCCCCHHHHHHHHHHHHHH---Hhcc-ccch---hhCcCHHHHHHHHHH
Confidence 789999999999999999988873 3323 3 44 689999999999976
No 107
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.74 E-value=3.9e-08 Score=64.70 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=48.5
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeee
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIV 65 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~ 65 (227)
+++||+.+.||+|.+++-+|..+||+|+.+.++-.....+.....+.. ++|+++.++..+.
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~~-~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGFR-QLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCC-CcCEEEECCEEEe
Confidence 489999999999999999999999999999887433222223345766 8999998886654
No 108
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.71 E-value=7.5e-08 Score=61.70 Aligned_cols=70 Identities=24% Similarity=0.272 Sum_probs=56.0
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeee--eehHHHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVI--VESFVFLEYI 74 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l--~es~aI~~yL 74 (227)
+++||+.++||+|++++.+|...|++|..+.++... ...++...++.. .+|+++.+|..+ .++..|-++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~-~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQR-GVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCC-cccEEEECCEEEeeCCHHHHHHHh
Confidence 479999999999999999999999999988776432 234566777876 899999988777 5666666654
No 109
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.70 E-value=7.8e-08 Score=61.98 Aligned_cols=66 Identities=21% Similarity=0.238 Sum_probs=55.4
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVF 70 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI 70 (227)
+++||+.+.||+|++++.+|...||+|+.+.++... ..+++.+.++.. ++|++..||..|..--..
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~-~vP~v~i~~~~iGg~~~~ 68 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSS-VVPQIFFNEKLVGGLTDL 68 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCC-CcCEEEECCEEEeCHHHH
Confidence 589999999999999999999999999999886432 456788888876 899999999887754443
No 110
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.68 E-value=8.6e-08 Score=69.61 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhc--CCccccCCCcchHHHHHHHHHhc
Q 046710 119 EKQKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAG--GSMRILDSQKFPAIAEWSTKFLK 193 (227)
Q Consensus 119 ~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~--~~~~~~~~~~~p~l~~~~~~~~~ 193 (227)
..++..+.+.+.++.+|+.|++++|++|++||.+|+++++.+..+... ... +.... ...+|||.+|++++.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~-~~~~~~l~~~--~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKA-PLPNNKLQNH--LKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc-cCCChHHHHH--HHHCcHHHHHHHHHHH
Confidence 456677888899999999999999999999999999999887766321 110 00011 3679999999999975
No 111
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.68 E-value=7.6e-08 Score=61.54 Aligned_cols=62 Identities=24% Similarity=0.254 Sum_probs=52.4
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeee
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVE 66 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~e 66 (227)
++++|+.++||+|++++.+|.+.|++|..+.++... ...++.+.+|.+ ++|+|.++|..+.+
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~-~vP~i~~~~~~i~g 63 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYR-SVPVVVIGDEHLSG 63 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCc-ccCEEEECCEEEec
Confidence 479999999999999999999999999998887542 345677888887 89999998876654
No 112
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.66 E-value=1.4e-07 Score=59.99 Aligned_cols=69 Identities=25% Similarity=0.178 Sum_probs=58.6
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEY 73 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~y 73 (227)
+++||+.+.||+|++++.+|..+|++|+.+.++... ...++...++.. ++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~-~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWP-TVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCC-CcCEEEECCEEEecHHHHHHh
Confidence 479999999999999999999999999988776443 345677788876 899999999999998887653
No 113
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.63 E-value=3e-07 Score=63.06 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHH-----hhc--cCchHHHHHHHHHHHHHHHHHHHhCC-CccccCCCCchhHHHHHh
Q 046710 87 DPYEKAMARFWAKFGDEKLLESAYK-----AMW--SKGEEKQKAMKEAVESLEKIEEVLGG-KNFMGGNSIGYLDLAIGW 158 (227)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~l~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~ 158 (227)
|..+|++.++++.|+...|.+.-.. .+. ....-.+...+.+.+++...+.+|.. ++|++| ..|+||..+++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHH
Confidence 4678999999999999886554332 222 12334456677778888889998874 789999 69999999999
Q ss_pred HHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccccccC
Q 046710 159 IGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVIKENL 201 (227)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 201 (227)
++.++.. . | .++ -+++..|.++.-++|++++.+
T Consensus 80 ml~Rl~~---~-g-d~v-----P~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 80 MLNRLVT---Y-G-DPV-----PERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHT---T-T----------HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHH---c-C-CCC-----CHHHHHHHHHHHCCHHHHHHH
Confidence 9999842 2 5 333 458999999999999998765
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=8.5e-07 Score=58.14 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=53.8
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC--CchhH-HhhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN--KSTEL-LELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~--~~~~~-~~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
++++|+.+.||||.++.-+|..+|++|+++.++... ...++ ...++.. ++|++..||..+.....+-+
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~-tvP~I~i~~~~igg~~d~~~ 72 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQR-TVPQIFIGGKHVGGCDDLDA 72 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCC-CcCEEEECCEEEeCcccHHH
Confidence 489999999999999999999999999999987665 33333 4555765 89999999987765444333
No 115
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.46 E-value=1.2e-06 Score=56.56 Aligned_cols=70 Identities=21% Similarity=0.180 Sum_probs=55.2
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCC-CCchhHHhh-CCCCceecEEEeCCeeeeehHHHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF-NKSTELLEL-NPVHKKVPVLVHDKRVIVESFVFLEYI 74 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~-~~~~~~~~~-~p~g~~vP~L~~~g~~l~es~aI~~yL 74 (227)
+++||+.+.||+|.+++-+|...|++|+.+.++.. +...++... +... .+|++..+|..+.+...+.++-
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~-~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRR-TVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCC-ccCEEEECCEEEeChHHHHHHH
Confidence 48999999999999999999999999999988743 122334333 3332 6999999999999888877754
No 116
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.44 E-value=1.5e-06 Score=57.75 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=60.4
Q ss_pred ceEEecccCChHHHHHHHHHHh-----hCCCceEEEccCCC-CchhHHhhCCC--CceecEEEeCCeeeeehHHHHHHHh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKL-----KGVEFEYIEEDIFN-KSTELLELNPV--HKKVPVLVHDKRVIVESFVFLEYID 75 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~-----~gi~y~~~~v~~~~-~~~~~~~~~p~--g~~vP~L~~~g~~l~es~aI~~yL~ 75 (227)
++++|+.+.||+|.+++-+|.. .|++|+.+.++-.. ..+++...... . .+|.+..||..+.+...|.+++.
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~-~vP~ifi~g~~igg~~~~~~~~~ 80 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVE-TVPQIFVDQKHIGGCTDFEAYVK 80 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCC-cCCEEEECCEEEcCHHHHHHHHH
Confidence 3999999999999999999999 89999998887432 12344433322 3 79999999999999999999998
Q ss_pred hhCC
Q 046710 76 ETWP 79 (227)
Q Consensus 76 ~~~~ 79 (227)
+.++
T Consensus 81 ~~~~ 84 (85)
T PRK11200 81 ENLG 84 (85)
T ss_pred Hhcc
Confidence 8764
No 117
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.43 E-value=1.3e-06 Score=57.13 Aligned_cols=71 Identities=20% Similarity=0.128 Sum_probs=57.5
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
+++|+.+.||+|.+++-+|+..|++|+.+.++... ...++.+..... .+|++..+|..+.+...+..+-.+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~-~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRR-TVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCC-CcCEEEECCEEEcChHHHHHHHHc
Confidence 58999999999999999999999999999887442 334556655555 899999999999887777765544
No 118
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.42 E-value=8.7e-07 Score=57.37 Aligned_cols=70 Identities=11% Similarity=0.232 Sum_probs=52.7
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhC-CCCceecEEE-eCCeeeeeh--HHHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELN-PVHKKVPVLV-HDKRVIVES--FVFLEYI 74 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~-p~g~~vP~L~-~~g~~l~es--~aI~~yL 74 (227)
+++||+.++||+|++++.+|...|++|+.+.++-.. ....+..++ +.. .+|+++ ++|..+.++ ..+..+|
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~-~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNM-TVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCc-eeCEEEECCCeEecCCCHHHHHHHh
Confidence 479999999999999999999999999988776443 334555665 766 899997 467776653 3444444
No 119
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.41 E-value=8.2e-07 Score=57.01 Aligned_cols=57 Identities=21% Similarity=0.218 Sum_probs=44.3
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCe
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKR 62 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~ 62 (227)
++||+.+.||+|++++-+|...|++|+.+.++-.....+.....+.. .+|+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~~-~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGFR-QVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCc-ccCEEEECCC
Confidence 58999999999999999999999999999887443222223334654 8999998664
No 120
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.40 E-value=6.3e-07 Score=55.33 Aligned_cols=59 Identities=27% Similarity=0.309 Sum_probs=49.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCC-CCchhHHhhCCCCceecEEEeCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF-NKSTELLELNPVHKKVPVLVHDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~p~g~~vP~L~~~g~~l 64 (227)
+++|+.+.||+|.+++-+|...|++|+.+.++.. ....++.+..... ++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~-~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVR-TVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSS-SSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCC-ccCEEEECCEEC
Confidence 5899999999999999999999999999998865 3445666665544 799999988764
No 121
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.27 E-value=5.7e-06 Score=55.03 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=57.4
Q ss_pred eEEecccCChHHHHHHHHHHhhC-----CCceEEEccCCC-CchhHHhhCCC--CceecEEEeCCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKG-----VEFEYIEEDIFN-KSTELLELNPV--HKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~g-----i~y~~~~v~~~~-~~~~~~~~~p~--g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
+++|+.++||||.+++-+|...+ ++|+.+.++... ...++...... . .||++..||..+.++..|..++.+
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~-tVP~ifi~g~~igG~~dl~~~~~~ 80 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVE-TVPQIFVDEKHVGGCTDFEQLVKE 80 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCC-CcCeEEECCEEecCHHHHHHHHHh
Confidence 68999999999999999999985 567777665322 12334443332 3 799999999999999999999988
Q ss_pred hCC
Q 046710 77 TWP 79 (227)
Q Consensus 77 ~~~ 79 (227)
++.
T Consensus 81 ~~~ 83 (86)
T TIGR02183 81 NFD 83 (86)
T ss_pred ccc
Confidence 764
No 122
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.26 E-value=1e-05 Score=55.34 Aligned_cols=69 Identities=16% Similarity=0.034 Sum_probs=55.8
Q ss_pred CceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCch----hHHhhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 3 TKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKST----ELLELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 3 ~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~----~~~~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
+++++|+-++||||.+++-+|...|++|+.+.++-..... .+....... ++|.+..+|..|...-.+..
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~-tvP~Vfi~g~~iGG~ddl~~ 80 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSP-AVPAVFVGGKLVGGLENVMA 80 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCC-CcCeEEECCEEEcCHHHHHH
Confidence 4799999999999999999999999999999987543222 344455555 89999999998887766665
No 123
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.24 E-value=1.1e-05 Score=52.93 Aligned_cols=72 Identities=21% Similarity=0.166 Sum_probs=59.6
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCc----hhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKS----TELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~----~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
++++|+.+.||+|.+++-+|...+++|+.+.++..+.. ..+.+..... .+|++..+|..+.++..|..+..+
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~-~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQR-TVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCC-CCCeEEECCEEEcCHHHHHHHHHc
Confidence 47899999999999999999999999999998865432 2344555554 799999999999999998887654
No 124
>PHA03050 glutaredoxin; Provisional
Probab=98.21 E-value=1.2e-05 Score=55.76 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=56.5
Q ss_pred CceEEecccCChHHHHHHHHHHhhCC---CceEEEccCCC----CchhHHhhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 3 TKVKLLGFWCSPFAFRVVWALKLKGV---EFEYIEEDIFN----KSTELLELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 3 ~~~~Ly~~~~s~~~~~v~~~L~~~gi---~y~~~~v~~~~----~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
+++++|+.++||||.+++-+|...|+ +|+.+.++-.. ...++.+..... +||.+..+|..|.....+..
T Consensus 13 ~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~-tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 13 NKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGR-TVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCC-CcCEEEECCEEEeChHHHHH
Confidence 47999999999999999999999999 78888887432 234666777665 89999999998887766655
No 125
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.94 E-value=5.8e-05 Score=51.33 Aligned_cols=70 Identities=21% Similarity=0.155 Sum_probs=53.9
Q ss_pred CceEEecc-----cCChHHHHHHHHHHhhCCCceEEEccCC-CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHH
Q 046710 3 TKVKLLGF-----WCSPFAFRVVWALKLKGVEFEYIEEDIF-NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEY 73 (227)
Q Consensus 3 ~~~~Ly~~-----~~s~~~~~v~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~y 73 (227)
+++.||.- +.||||.+++-+|...|++|+.+.++-. .....+...+... ++|.+..||..+...-.+...
T Consensus 12 ~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~-tvP~vfi~g~~iGG~ddl~~l 87 (97)
T TIGR00365 12 NPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWP-TIPQLYVKGEFVGGCDIIMEM 87 (97)
T ss_pred CCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCC-CCCEEEECCEEEeChHHHHHH
Confidence 47888854 8899999999999999999998877522 1233455566655 899999999988777666653
No 126
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.93 E-value=9.5e-05 Score=48.50 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=56.9
Q ss_pred eEEecccCChHHHHHHHHHHhhCCC--ceEEEccCCCCch----hHHhhCCCCceecEEEeCCeeeeehHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVE--FEYIEEDIFNKST----ELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDE 76 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~--y~~~~v~~~~~~~----~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~ 76 (227)
+++|+-++||+|.+++-+|...+++ |+.+.++...... .+....... .+|.+..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~-~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQR-TVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCC-CCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 8888887653322 344555554 799999999999998888776544
No 127
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.89 E-value=8.7e-05 Score=49.74 Aligned_cols=71 Identities=20% Similarity=0.088 Sum_probs=55.3
Q ss_pred CceEEecc-----cCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHHHH
Q 046710 3 TKVKLLGF-----WCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYI 74 (227)
Q Consensus 3 ~~~~Ly~~-----~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL 74 (227)
+++.+|.- +.||||.+++-+|...|++|+.+.++-.. ...++....... ++|.+..||..|.....+....
T Consensus 8 ~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~-tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 8 NPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWP-TFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCC-CCCEEEECCEEEeCHHHHHHHH
Confidence 36888854 69999999999999999999999876332 234555666654 8999999999988877777643
No 128
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.51 E-value=0.00047 Score=59.19 Aligned_cols=70 Identities=19% Similarity=0.145 Sum_probs=52.7
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHH-hh--------CCCCceecEEEeCCeeeeehHHHH
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELL-EL--------NPVHKKVPVLVHDKRVIVESFVFL 71 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~-~~--------~p~g~~vP~L~~~g~~l~es~aI~ 71 (227)
|. ++++|+.+.||+|.++.-+|...||+|+.+.++-.....++. .+ .... .||++..||..+..-..+.
T Consensus 1 m~-~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~~-tvP~ifi~~~~igGf~~l~ 78 (410)
T PRK12759 1 MV-EVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHIR-TVPQIFVGDVHIGGYDNLM 78 (410)
T ss_pred CC-cEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCCC-ccCeEEECCEEEeCchHHH
Confidence 55 799999999999999999999999999999987333222222 22 2443 7999999888877655544
Q ss_pred H
Q 046710 72 E 72 (227)
Q Consensus 72 ~ 72 (227)
.
T Consensus 79 ~ 79 (410)
T PRK12759 79 A 79 (410)
T ss_pred H
Confidence 4
No 129
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.48 E-value=0.00071 Score=43.21 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=46.9
Q ss_pred CChHHHHHHHHHHhhCCC---ceEEEccCCCCchhHHhhCCCCceecEEEe-CCeeeeehHHHHHHH
Q 046710 12 CSPFAFRVVWALKLKGVE---FEYIEEDIFNKSTELLELNPVHKKVPVLVH-DKRVIVESFVFLEYI 74 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~---y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~-~g~~l~es~aI~~yL 74 (227)
.++-|..+.++|..++.+ |+.+..+-. ..+|.| ++|+|.+ +++.+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n~-------~~Sptg-~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNNP-------WLSPTG-ELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCCC-------CcCCCC-CCCEEEECCCcEEECHHHHHHhh
Confidence 678899999999999999 777765422 355777 9999999 899999999999998
No 130
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.39 E-value=0.00097 Score=48.80 Aligned_cols=68 Identities=21% Similarity=0.063 Sum_probs=53.9
Q ss_pred ceEEeccc------CChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCC----CceecEEEeCCeeeeehHHHHH
Q 046710 4 KVKLLGFW------CSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPV----HKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 4 ~~~Ly~~~------~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~----g~~vP~L~~~g~~l~es~aI~~ 72 (227)
+++||..+ ++|+|.+++-+|...||+|+++.++... ...++.+.... . .+|.+-.+|..|...-.+.+
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~-tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAV-SLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCC-CCCEEEECCEEEecHHHHHH
Confidence 37899998 8999999999999999999999887542 34455554332 4 79999999988887766665
No 131
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.29 E-value=0.0019 Score=46.23 Aligned_cols=67 Identities=18% Similarity=0.263 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 121 QKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 121 ~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
.+..+++...|..+|.++......-| ++|+-|+.+|+.|+.+-.+. | ..+ =|+|.+|++++.+.-++
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk---g-i~~-----P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK---G-IQW-----PPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT---T-S--------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc---C-CcC-----CHHHHHHHHHHHHHcCC
Confidence 45678888889999998886666555 99999999999999884332 3 333 57999999999886544
No 132
>PRK10824 glutaredoxin-4; Provisional
Probab=97.13 E-value=0.003 Score=44.21 Aligned_cols=70 Identities=20% Similarity=0.163 Sum_probs=54.4
Q ss_pred CceEEecc-----cCChHHHHHHHHHHhhCCCceEEEccCC-CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHH
Q 046710 3 TKVKLLGF-----WCSPFAFRVVWALKLKGVEFEYIEEDIF-NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEY 73 (227)
Q Consensus 3 ~~~~Ly~~-----~~s~~~~~v~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~y 73 (227)
+++.+|.- +.||||.++.-+|...|++|..+.++-. +....+...+... ++|-+-.+|..|..+-.+...
T Consensus 15 ~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~-TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 15 NPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWP-TFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred CCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCC-CCCeEEECCEEEcChHHHHHH
Confidence 36778865 5899999999999999999998877533 2334555666655 899999999999887776664
No 133
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.07 E-value=0.00019 Score=61.86 Aligned_cols=106 Identities=18% Similarity=0.293 Sum_probs=73.9
Q ss_pred CCeeeeehHHHHHHHhhhC-CCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHh
Q 046710 60 DKRVIVESFVFLEYIDETW-PQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVL 138 (227)
Q Consensus 60 ~g~~l~es~aI~~yL~~~~-~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L 138 (227)
+|..+..+..+..|.+... +.+.++|.+ .++.+++.|+++.... ....+...+..++..|
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~------------------~~~~~s~~~~~ld~~l 104 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF------------------SFDEISSSLSELDKFL 104 (712)
T ss_pred ccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc------------------chHHHHHHHHHHHhhh
Confidence 4566666666777766443 245588887 7899999999987662 1134556677788888
Q ss_pred CCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHH
Q 046710 139 GGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWST 189 (227)
Q Consensus 139 ~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~ 189 (227)
.-+.|++|.++|+||+++|..+..-...... ... ...+-++.+|++
T Consensus 105 ~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~---lk~--~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 105 VLRTFLVGNSLSIADFAIWGALHSNGMRQEQ---LKA--KKDYQNVERWYD 150 (712)
T ss_pred hHHHHhhccchhHHHHHHHHHHhcccchHHH---HHh--hCCchhhhhhcC
Confidence 8889999999999999999987763111111 111 235668888888
No 134
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.74 E-value=0.0065 Score=37.89 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=40.3
Q ss_pred ceEEecccCChHHHHHHHHHHhh-----CCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeee
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLK-----GVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIV 65 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~-----gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~ 65 (227)
++++|+.++||+|.++.-+|.+. +++|..+.++ +. +++....... .+|++..+|..++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~--~~-~~l~~~~~i~-~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA--EF-PDLADEYGVM-SVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc--cC-HhHHHHcCCc-ccCEEEECCEEEE
Confidence 47899999999999999888865 4555555443 22 2344333333 6999998887654
No 135
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.74 E-value=0.011 Score=40.58 Aligned_cols=71 Identities=18% Similarity=0.173 Sum_probs=57.1
Q ss_pred CCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCch----hHHhhCCCCceecEEEeCCeeeeehHHHHHH
Q 046710 2 TTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKST----ELLELNPVHKKVPVLVHDKRVIVESFVFLEY 73 (227)
Q Consensus 2 ~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~----~~~~~~p~g~~vP~L~~~g~~l~es~aI~~y 73 (227)
.+++.+|+=.+||||.++.-+|...|+++..+++|-..... .+..+.... ++|.+-.+|+.+..+..+..+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~-tvP~vFI~Gk~iGG~~dl~~l 87 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQR-TVPNVFIGGKFIGGASDLMAL 87 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCC-CCCEEEECCEEEcCHHHHHHH
Confidence 35789999999999999999999999999999998764333 333445444 899999999999877777654
No 136
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.70 E-value=0.011 Score=41.97 Aligned_cols=67 Identities=9% Similarity=0.094 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcCccc
Q 046710 121 QKAMKEAVESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKHPVI 197 (227)
Q Consensus 121 ~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 197 (227)
.+..+++...+..++..+..... .++++|+-|+.+|+.|+.+-... | ..+ =|+|.+|+++|.+..++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vk---g-i~~-----P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVK---G-LVF-----PPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhc---C-CCC-----CHHHHHHHHHHHHHhCC
Confidence 35567788888888888855444 35589999999999999884432 3 333 47999999999987654
No 137
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.68 E-value=0.0025 Score=44.39 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=30.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccC
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDI 37 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~ 37 (227)
++||+.+.|++|++++-.|...|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 589999999999999999999999999998753
No 138
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.63 E-value=0.0031 Score=43.42 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=30.2
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
++||+.+.|++|++++-+|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 58999999999999999999999999999875
No 139
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.62 E-value=0.0034 Score=45.11 Aligned_cols=32 Identities=13% Similarity=-0.096 Sum_probs=30.5
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
++||+.+.|++|++++-+|...||+|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 79999999999999999999999999999874
No 140
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.52 E-value=0.0045 Score=43.42 Aligned_cols=32 Identities=16% Similarity=-0.049 Sum_probs=30.4
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|++|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 79999999999999999999999999999874
No 141
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.49 E-value=0.012 Score=37.23 Aligned_cols=63 Identities=27% Similarity=0.372 Sum_probs=46.6
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCC-----------CCchhHHhh--CCCCceecEEE-eCCeeee
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIF-----------NKSTELLEL--NPVHKKVPVLV-HDKRVIV 65 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~-----------~~~~~~~~~--~p~g~~vP~L~-~~g~~l~ 65 (227)
|+ +.+||+...||-|....-.|+..+++|+.+.+.-. +..++|-+. |..- -+|+|. +||.++.
T Consensus 1 ms-kp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyi-GIPall~~d~~vVl 77 (85)
T COG4545 1 MS-KPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYI-GIPALLTDDGKVVL 77 (85)
T ss_pred CC-CceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcc-cceEEEeCCCcEEE
Confidence 66 66999999999999999999999999999987532 234455432 3333 389987 5665554
No 142
>PTZ00062 glutaredoxin; Provisional
Probab=96.47 E-value=0.016 Score=44.81 Aligned_cols=69 Identities=22% Similarity=0.083 Sum_probs=52.7
Q ss_pred CceEEecc-----cCChHHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 3 TKVKLLGF-----WCSPFAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 3 ~~~~Ly~~-----~~s~~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
+++.||.- |.||||+++.-+|...|++|+...++-.. ....+...+... ++|.+-.+|..|...-.+.+
T Consensus 113 ~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~~-TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 113 HKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWP-TYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred CCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCCC-CCCeEEECCEEEcChHHHHH
Confidence 36778844 68999999999999999999988776332 234455555554 89999999998887766665
No 143
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.18 E-value=0.0081 Score=42.24 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=29.9
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
++||+.+.|++|++++-+|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999999999999999999988874
No 144
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.15 E-value=0.0096 Score=42.83 Aligned_cols=32 Identities=6% Similarity=-0.003 Sum_probs=30.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|+.|++++-.|...|++|+++.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 79999999999999999999999999999875
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.11 E-value=0.0098 Score=42.72 Aligned_cols=32 Identities=9% Similarity=-0.089 Sum_probs=30.5
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 79999999999999999999999999999875
No 146
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=96.00 E-value=0.044 Score=35.24 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=40.0
Q ss_pred eEEecccCChHHHHH----HHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeee
Q 046710 5 VKLLGFWCSPFAFRV----VWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIV 65 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v----~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~ 65 (227)
+.+|. ++||.|..+ .-++++.|++++.+.++- .++....+-. .+|++..||..+.
T Consensus 3 i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~---~~~a~~~~v~--~vPti~i~G~~~~ 61 (76)
T TIGR00412 3 IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD---MNEILEAGVT--ATPGVAVDGELVI 61 (76)
T ss_pred EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHHcCCC--cCCEEEECCEEEE
Confidence 77877 999999988 667788889888888872 1223344443 5999998886653
No 147
>PRK10026 arsenate reductase; Provisional
Probab=95.92 E-value=0.014 Score=42.43 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=31.8
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEc
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEE 35 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v 35 (227)
|+ ++++|+.+.|.=|++++-.|+..|++|+++.+
T Consensus 1 m~-~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~ 34 (141)
T PRK10026 1 MS-NITIYHNPACGTSRNTLEMIRNSGTEPTIIHY 34 (141)
T ss_pred CC-EEEEEeCCCCHHHHHHHHHHHHCCCCcEEEee
Confidence 64 79999999999999999999999999999985
No 148
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.73 E-value=0.017 Score=39.77 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=30.0
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|+.|++++-.|...|++|+++.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999999764
No 149
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=95.72 E-value=0.063 Score=34.99 Aligned_cols=55 Identities=20% Similarity=0.101 Sum_probs=40.4
Q ss_pred ceEEecccCChHHHHHHHHHHhh--CCCceEEEccCCCCchhHHhhCCCCceecEEEeCC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLK--GVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDK 61 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~--gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g 61 (227)
+++||+-+.|+.|..+.-.|+.. ..+++...+|..+....+.... . .||||..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~~~Y~--~-~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPELFEKYG--Y-RIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHHHHSC--T-STSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCCHHHHHHhc--C-CCCEEEEcC
Confidence 47999999999999999999964 3466777777775544444443 2 699999877
No 150
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.56 E-value=0.023 Score=39.73 Aligned_cols=32 Identities=16% Similarity=-0.089 Sum_probs=30.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
++||+.+.|+-|++++-+|+..|++|+++.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 79999999999999999999999999998764
No 151
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=95.04 E-value=0.043 Score=38.53 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=30.6
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
++++|+.+.|.=|++++-.|+..||+|+++.+.
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 489999999999999999999999999988754
No 152
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=94.95 E-value=0.19 Score=33.64 Aligned_cols=67 Identities=19% Similarity=0.142 Sum_probs=47.7
Q ss_pred eEEecccCCh------HHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCC----CCceecEEEeCCeeeeehHHHHH
Q 046710 5 VKLLGFWCSP------FAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNP----VHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 5 ~~Ly~~~~s~------~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p----~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
++||....++ .|++++.+|..+||+|+++.++... ...++....+ .. .+|-+-.++..+.+.-.+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~-tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKP-LPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCC-CCCEEEECCEEeeCHHHHHH
Confidence 6788776553 3678899999999999999997643 3345544433 34 79988888888877654444
No 153
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=94.85 E-value=0.13 Score=33.10 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=39.0
Q ss_pred ceEEecccCChHHHHHHHHHHh----hCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCe
Q 046710 4 KVKLLGFWCSPFAFRVVWALKL----KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKR 62 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~----~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~ 62 (227)
+++||+.++|++|..+.-.|+. .+..+....+|..+... ........ .+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~-~~~~~~v~-~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ-KAMEYGIM-AVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHH-HHHHcCCc-cCCEEEECCE
Confidence 4789999999999988887754 35446666676554333 33333433 6999998775
No 154
>PRK10853 putative reductase; Provisional
Probab=94.46 E-value=0.072 Score=37.50 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=30.0
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|.=|++++-.|++.|++|+++.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 79999999999999999999999999988763
No 155
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=93.96 E-value=0.099 Score=37.24 Aligned_cols=33 Identities=18% Similarity=-0.027 Sum_probs=30.6
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
.++||+.+.|.=|++++-.|++.|++|+++.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 589999999999999999999999999998763
No 156
>PHA02125 thioredoxin-like protein
Probab=93.86 E-value=0.28 Score=31.27 Aligned_cols=51 Identities=25% Similarity=0.293 Sum_probs=35.9
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEe
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVH 59 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~ 59 (227)
+.+|+.++|+.|+.+.-.|+. +.++...++.... .++.....-. .+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~~~~-~~l~~~~~v~-~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLAN--VEYTYVDVDTDEG-VELTAKHHIR-SLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHH--HhheEEeeeCCCC-HHHHHHcCCc-eeCeEEC
Confidence 789999999999998888763 5666666665443 3444444433 6999983
No 157
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=93.78 E-value=0.19 Score=29.58 Aligned_cols=54 Identities=30% Similarity=0.234 Sum_probs=36.0
Q ss_pred eEEecccCChHHHHHHHHHH-----hhCCCceEEEccCCCCchhHHhhCCCCceecEEEe
Q 046710 5 VKLLGFWCSPFAFRVVWALK-----LKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVH 59 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~-----~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~ 59 (227)
+.+|+...|++|++.+..+. ..++.+..+.++............+.. .+|+++.
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~ 59 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGVG-GVPTLVV 59 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCCc-cccEEEE
Confidence 46788889999999999999 455666655554333222222355655 8999984
No 158
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=93.23 E-value=0.15 Score=35.62 Aligned_cols=32 Identities=19% Similarity=0.013 Sum_probs=29.6
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|.=|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988754
No 159
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=93.21 E-value=0.15 Score=35.44 Aligned_cols=32 Identities=16% Similarity=0.015 Sum_probs=29.5
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
+++|+.+.|.=|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988753
No 160
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=92.64 E-value=0.26 Score=32.77 Aligned_cols=58 Identities=21% Similarity=0.139 Sum_probs=39.0
Q ss_pred ceEEecccCChHHHHHHHHHHhh-----CCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeee
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLK-----GVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIV 65 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~-----gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~ 65 (227)
.+++|..++|++|..+.-++... ++.+..+.++ +..+...+.+= . .+|.++.||..+.
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~--~~~e~a~~~~V-~-~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA--LFQDEVEERGI-M-SVPAIFLNGELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH--hCHHHHHHcCC-c-cCCEEEECCEEEE
Confidence 57899999999999888777664 4555544443 33333344444 3 5999998886554
No 161
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=92.14 E-value=0.86 Score=30.79 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=50.8
Q ss_pred CceEEe-----cccCChHHHHHHHHHHhhC-CCceEEEccCC-CCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHH
Q 046710 3 TKVKLL-----GFWCSPFAFRVVWALKLKG-VEFEYIEEDIF-NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYI 74 (227)
Q Consensus 3 ~~~~Ly-----~~~~s~~~~~v~~~L~~~g-i~y~~~~v~~~-~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL 74 (227)
+++.|| .+|-|+||.++-=+|..+| ++|..+.|--. +-+..++..+-.- ++|-|-.+|..+..|-.|.+..
T Consensus 15 n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~WP-T~PQLyi~GEfvGG~DIv~Em~ 92 (105)
T COG0278 15 NPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNWP-TFPQLYVNGEFVGGCDIVREMY 92 (105)
T ss_pred CceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCCC-CCceeeECCEEeccHHHHHHHH
Confidence 356666 4789999999999999999 56665554221 2334445555555 8999999999998887777644
No 162
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=92.07 E-value=0.63 Score=29.72 Aligned_cols=57 Identities=25% Similarity=0.289 Sum_probs=36.4
Q ss_pred eEEecccCChHHHHHHH----HHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeeh
Q 046710 5 VKLLGFWCSPFAFRVVW----ALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVES 67 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~----~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es 67 (227)
+++ ..+.||+|..+.- ++...|+.++.+.+ ...++..+.+= . .+|+|+.||...+..
T Consensus 3 I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~---~~~~~~~~ygv-~-~vPalvIng~~~~~G 63 (76)
T PF13192_consen 3 IKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI---EDFEEIEKYGV-M-SVPALVINGKVVFVG 63 (76)
T ss_dssp EEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET---TTHHHHHHTT--S-SSSEEEETTEEEEES
T ss_pred EEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc---cCHHHHHHcCC-C-CCCEEEECCEEEEEe
Confidence 778 5666999996665 44455777765554 23344444433 4 699999998776543
No 163
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=91.58 E-value=0.69 Score=31.43 Aligned_cols=67 Identities=18% Similarity=0.084 Sum_probs=38.0
Q ss_pred CCCceEEecccCChH------HHHHHHHHHhhCCCceEEEccCCC-CchhHHhhC---------CCCceecEEEeCCeee
Q 046710 1 MTTKVKLLGFWCSPF------AFRVVWALKLKGVEFEYIEEDIFN-KSTELLELN---------PVHKKVPVLVHDKRVI 64 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~------~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~---------p~g~~vP~L~~~g~~l 64 (227)
|. ++||....++. .+++..+|+.++|+|+.+.+...+ ...++.... +.. ..|-|..|+..+
T Consensus 1 m~--I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~-lpPqiF~~~~Y~ 77 (99)
T PF04908_consen 1 MV--IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKP-LPPQIFNGDEYC 77 (99)
T ss_dssp -S--EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT---S-EEEETTEEE
T ss_pred CE--EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCC-CCCEEEeCCEEE
Confidence 65 89998776643 569999999999999998887643 223333332 222 346777777666
Q ss_pred eehHHH
Q 046710 65 VESFVF 70 (227)
Q Consensus 65 ~es~aI 70 (227)
.+=-.+
T Consensus 78 Gdye~f 83 (99)
T PF04908_consen 78 GDYEDF 83 (99)
T ss_dssp EEHHHH
T ss_pred eeHHHH
Confidence 554333
No 164
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=90.07 E-value=1.3 Score=30.64 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=44.8
Q ss_pred CChHHHHHHHHHHhh---CCCceEEEccCCCCchhHHhh-CCCCceecEEEe-CC-------------eeeeehHHHHHH
Q 046710 12 CSPFAFRVVWALKLK---GVEFEYIEEDIFNKSTELLEL-NPVHKKVPVLVH-DK-------------RVIVESFVFLEY 73 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~---gi~y~~~~v~~~~~~~~~~~~-~p~g~~vP~L~~-~g-------------~~l~es~aI~~y 73 (227)
.||.|..+.-+|... .-..+++.|+........... ..-...+|+|+- +| ..|.++..|++|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~ 102 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRY 102 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHH
Confidence 577788887777764 224566667766544444332 221125899992 22 368999999999
Q ss_pred HhhhCC
Q 046710 74 IDETWP 79 (227)
Q Consensus 74 L~~~~~ 79 (227)
|.++|+
T Consensus 103 La~r~g 108 (112)
T PF11287_consen 103 LAERHG 108 (112)
T ss_pred HHHHcC
Confidence 999987
No 165
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=89.28 E-value=1.2 Score=33.46 Aligned_cols=38 Identities=29% Similarity=0.221 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCC---ccccCCC-CchhHHHHHhHHhHH
Q 046710 126 EAVESLEKIEEVLGGK---NFMGGNS-IGYLDLAIGWIGYWI 163 (227)
Q Consensus 126 ~l~~~l~~le~~L~~~---~~l~G~~-~t~aD~~l~~~l~~~ 163 (227)
...+.+..+++.|+.. +|++|+. +|-+||.+++.+.-+
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 3567889999999887 9999977 999999999877655
No 166
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=86.49 E-value=3.2 Score=26.28 Aligned_cols=63 Identities=14% Similarity=0.347 Sum_probs=36.1
Q ss_pred ehHHHHHHHhhhCC--CCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhCCCcc
Q 046710 66 ESFVFLEYIDETWP--QDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVLGGKNF 143 (227)
Q Consensus 66 es~aI~~yL~~~~~--~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~ 143 (227)
|..-|+.++..-|| ...+.+++. +..++.|.....+. ........+.+++..++|
T Consensus 5 E~~~ll~~I~~aYP~~~~~f~~~~~--k~~v~~W~~~L~d~---------------------~ye~v~~al~~~i~~~kf 61 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAGNFKPTDS--KETVDLWYDMLKDY---------------------DYEIVMKALKKHIATNKF 61 (71)
T ss_dssp HHHHHHHHHHHHST---TT---STH--HHHHHHHHHHHTTS----------------------HHHHHHHHHHHHHH-SS
T ss_pred HHHHHHHHHHHHCCcchhccchhhH--HHHHHHHHHHHHhC---------------------CHHHHHHHHHHHHHhCCC
Confidence 56778999999998 334555553 56788888887765 223334445555555666
Q ss_pred ccCCCCchhHHH
Q 046710 144 MGGNSIGYLDLA 155 (227)
Q Consensus 144 l~G~~~t~aD~~ 155 (227)
.||+||+.
T Consensus 62 ----PPsiaeii 69 (71)
T PF11417_consen 62 ----PPSIAEII 69 (71)
T ss_dssp -------GGGG-
T ss_pred ----CcCHHHHh
Confidence 68888874
No 167
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=83.53 E-value=1.6 Score=30.06 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=22.9
Q ss_pred ecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 8 LGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 8 y~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
|+.+.|.-|++++-.|+..|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999988764
No 168
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=83.46 E-value=4.5 Score=29.18 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=49.8
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeee---ehHHHHHHHhhhC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIV---ESFVFLEYIDETW 78 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~---es~aI~~yL~~~~ 78 (227)
++.+|+.|.|++|..-.=.|+.+|..++.+..+.+..-..-..+-+-....=+.+.+|..+= --.+|.+.|++..
T Consensus 27 ~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~~~p 104 (149)
T COG3019 27 EMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDFLALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLAEKP 104 (149)
T ss_pred eEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcHHHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHhCCC
Confidence 78999999999999999999999998888876643200000111110012334556776653 3578999999876
No 169
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=71.58 E-value=3.6 Score=32.28 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHhcC
Q 046710 128 VESLEKIEEVLGGKNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFLKH 194 (227)
Q Consensus 128 ~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 194 (227)
...+..++.+|.+.+|.-|.+++-+|+.++..+.. .+. ...+++..+|+..+.+.
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~----------ep~--s~~~v~~~~w~~~l~a~ 64 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV----------EPQ--SARLVNAERWYSKLEAL 64 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc----------Ccc--hhhhhHHHHHHHHHHHH
Confidence 46788899999999999999999999998765432 111 24567778888776664
No 170
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=71.21 E-value=3.8 Score=28.80 Aligned_cols=27 Identities=15% Similarity=0.305 Sum_probs=13.6
Q ss_pred eecEEEe--CCeeeeehHHHHHHHhhhCC
Q 046710 53 KVPVLVH--DKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 53 ~vP~L~~--~g~~l~es~aI~~yL~~~~~ 79 (227)
.-|-|.+ +|..++|+.||++|+..-|.
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcC
Confidence 4578853 67999999999999999875
No 171
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=69.41 E-value=13 Score=33.46 Aligned_cols=58 Identities=28% Similarity=0.299 Sum_probs=38.0
Q ss_pred ceEEecccCChHHHHHHHH----HHhh-CCCceEEEccCCCCchhHH-hhCCCCceecEEEeCCeeeee
Q 046710 4 KVKLLGFWCSPFAFRVVWA----LKLK-GVEFEYIEEDIFNKSTELL-ELNPVHKKVPVLVHDKRVIVE 66 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~----L~~~-gi~y~~~~v~~~~~~~~~~-~~~p~g~~vP~L~~~g~~l~e 66 (227)
.+++|..+.||||-.+.-+ ..+. +|..+.+.+... +++. +.+= . .||.++.||..+.+
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~---~~~~~~~~v-~-~vP~~~i~~~~~~~ 542 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHF---PDLKDEYGI-M-SVPAIVVDDQQVYF 542 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECccc---HHHHHhCCc-e-ecCEEEECCEEEEe
Confidence 4789999999998765543 3344 677666665432 3444 4444 4 59999988866543
No 172
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=66.74 E-value=34 Score=22.49 Aligned_cols=57 Identities=16% Similarity=0.089 Sum_probs=33.8
Q ss_pred eEEecccCChHHHHHHHHHHhh----CCCceEEEccCCCCchhHH-hhCCCCceecEEE--eCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK----GVEFEYIEEDIFNKSTELL-ELNPVHKKVPVLV--HDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~----gi~y~~~~v~~~~~~~~~~-~~~p~g~~vP~L~--~~g~~l 64 (227)
+..|+.++|+.|+...-.+... +-.+....+|.... +++. ...- . .+|++. .+|..+
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~-~~l~~~~~v-~-~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDED-QEIAEAAGI-M-GTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCCC-HHHHHHCCC-e-eccEEEEEECCeEE
Confidence 5677788999999887777551 11244455554433 3333 3333 3 599887 466544
No 173
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=66.03 E-value=5.7 Score=35.40 Aligned_cols=72 Identities=18% Similarity=0.050 Sum_probs=43.2
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCC---ceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeeh----HHHHHHHhh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVE---FEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVES----FVFLEYIDE 76 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~---y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es----~aI~~yL~~ 76 (227)
.+++|..+.||||-.+.-++....+. .+...++-....+...+.+- . .||.+..|+..+.+. ..+++.+.+
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~~~~~~~v-~-~VP~~~i~~~~~~~g~~~~~~~~~~l~~ 197 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGALFQDEVEALGI-Q-GVPAVFLNGEEFHNGRMDLAELLEKLEE 197 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHHHHHhcCC-c-ccCEEEECCcEEEecCCCHHHHHHHHhh
Confidence 47899999999998877766655432 23333443333333334443 4 699999887666553 244455544
Q ss_pred h
Q 046710 77 T 77 (227)
Q Consensus 77 ~ 77 (227)
.
T Consensus 198 ~ 198 (515)
T TIGR03140 198 T 198 (515)
T ss_pred c
Confidence 3
No 174
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=65.63 E-value=34 Score=22.18 Aligned_cols=58 Identities=7% Similarity=-0.053 Sum_probs=36.0
Q ss_pred eEEecccCChHHHHHHHHHHhh----CCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK----GVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~----gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l 64 (227)
+..|+.++|+.|++..-.|... +..+....++...........+.. .+|++. .+|..+
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~~~~~~~i~--~~Pt~~~~~~g~~~ 81 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPEISEKFEIT--AVPTFVFFRNGTIV 81 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHHHHHhcCCc--cccEEEEEECCEEE
Confidence 4567788999999887766542 334555666654433333445553 599887 466543
No 175
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=64.41 E-value=7.5 Score=34.64 Aligned_cols=72 Identities=17% Similarity=0.025 Sum_probs=43.7
Q ss_pred ceEEecccCChHHHHHHHHHHhhCCC---ceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeeh----HHHHHHHhh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGVE---FEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVES----FVFLEYIDE 76 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi~---y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es----~aI~~yL~~ 76 (227)
.+++|..+.||||-.+.-++....+. .+...++-... +++.+.-.-. .||.+..|+..+.+. ..+++.+.+
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~-~~~~~~~~v~-~VP~~~i~~~~~~~g~~~~~~~~~~~~~ 196 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGALF-QDEVEARNIM-AVPTVFLNGEEFGQGRMTLEEILAKLDT 196 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEchhC-HhHHHhcCCc-ccCEEEECCcEEEecCCCHHHHHHHHhc
Confidence 47899999999998776666554332 33333443333 3444333334 699999887666542 345556554
Q ss_pred h
Q 046710 77 T 77 (227)
Q Consensus 77 ~ 77 (227)
.
T Consensus 197 ~ 197 (517)
T PRK15317 197 G 197 (517)
T ss_pred c
Confidence 3
No 176
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=58.64 E-value=27 Score=27.41 Aligned_cols=68 Identities=18% Similarity=0.074 Sum_probs=50.4
Q ss_pred ceEEe-----cccCChHHHHHHHHHHhhCCCceEEEccCC-CCchhHHhhCCCCceecEEEeCCeeeeehHHHHH
Q 046710 4 KVKLL-----GFWCSPFAFRVVWALKLKGVEFEYIEEDIF-NKSTELLELNPVHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 4 ~~~Ly-----~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
++.|| ..|-|+|++.+.-+|...|++|....|--. +-+.-+++.+-.- +.|=|=.+|.-+..+-.|..
T Consensus 140 ~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWP-TfPQlyI~GEFiGGlDIl~~ 213 (227)
T KOG0911|consen 140 PVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWP-TFPQLYVKGEFIGGLDILKE 213 (227)
T ss_pred eEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCC-CccceeECCEeccCcHHHHH
Confidence 45566 467899999999999999999988876433 2334455666665 88988889888877666555
No 177
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=58.53 E-value=59 Score=22.73 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=20.8
Q ss_pred eEEecccCChHHHHHHHHHHh----hCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKL----KGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~----~gi~y~~~~v~ 36 (227)
+.-|+.++||+|+.+.=.|.. .++++-.+.++
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 455788999999986555544 34555555554
No 178
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=56.51 E-value=62 Score=22.16 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=36.3
Q ss_pred eEEecccCChHHHHHHHHHHhhCC---CceEEEccCCCCchhHHhhCCCCceecEEE--eCCeeeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGV---EFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVIVE 66 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi---~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l~e 66 (227)
+..|+.++|+-|+.+.-.|+...- ......+|.... ..+.+...-. .+|++. .+|..+..
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~-~~l~~~~~v~-~vPt~l~fk~G~~v~~ 90 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAEKA-PFLVEKLNIK-VLPTVILFKNGKTVDR 90 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcccC-HHHHHHCCCc-cCCEEEEEECCEEEEE
Confidence 456677899999987776655211 235555665443 3344433433 699998 47766553
No 179
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=54.98 E-value=56 Score=21.18 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=40.8
Q ss_pred eEEecccCChHHHHHHHHHHhh----CCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeeee------ehHHHHH
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK----GVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVIV------ESFVFLE 72 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~----gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l~------es~aI~~ 72 (227)
+..|+.++|+.|+...=.+... +-++....+|............- . .+|.+. .+|..+. +.-.|..
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v-~-~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 98 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDENKELCKKYGV-K-SVPTIIFFKNGKEVKRYNGPRNAESLIE 98 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTTSHHHHHHTTC-S-SSSEEEEEETTEEEEEEESSSSHHHHHH
T ss_pred EEEEeCCCCCccccccceecccccccccccccchhhhhccchhhhccCC-C-CCCEEEEEECCcEEEEEECCCCHHHHHH
Confidence 5667888999999877555332 21566666666544333334443 4 699998 4664432 3345555
Q ss_pred HHhh
Q 046710 73 YIDE 76 (227)
Q Consensus 73 yL~~ 76 (227)
+|.+
T Consensus 99 ~i~~ 102 (103)
T PF00085_consen 99 FIEK 102 (103)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5543
No 180
>PTZ00051 thioredoxin; Provisional
Probab=54.04 E-value=58 Score=21.11 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=32.6
Q ss_pred eEEecccCChHHHHHHHHHHhh---CCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK---GVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~---gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l 64 (227)
+..|+.++|+.|+...-.+... ...+....++......-....+- . .+|+++ .+|..+
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~~~~~~~~~~v-~-~~Pt~~~~~~g~~~ 84 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDELSEVAEKENI-T-SMPTFKVFKNGSVV 84 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcchHHHHHHCCC-c-eeeEEEEEeCCeEE
Confidence 4567888999999776655442 22344445554432222233343 3 699887 356443
No 181
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=52.12 E-value=55 Score=20.29 Aligned_cols=54 Identities=19% Similarity=0.130 Sum_probs=32.7
Q ss_pred eEEecccCChHHHHHHHHHHh-----hCCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCe
Q 046710 5 VKLLGFWCSPFAFRVVWALKL-----KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKR 62 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~-----~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~ 62 (227)
+..|+.++|+.|+...-.+.. .++.+-.+ +... ...+....... .+|++. .+|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i--~~~~-~~~~~~~~~v~-~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKV--DVDE-NPELAEEYGVR-SIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEE--ECCC-ChhHHHhcCcc-cccEEEEEECCE
Confidence 567788899999988877776 45544433 3332 22333333334 599887 3554
No 182
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=51.86 E-value=17 Score=23.37 Aligned_cols=25 Identities=16% Similarity=0.289 Sum_probs=21.9
Q ss_pred CChHHHHHHHHHHhhCCCceEEEcc
Q 046710 12 CSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
--+|+++++-+|+..|++|+..+-.
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeecCC
Confidence 4579999999999999999998754
No 183
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=51.78 E-value=36 Score=26.39 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=33.4
Q ss_pred ceEEecccCChHHHHHHHHHHhhCC---CceEEEccCCCCchhHHhhCCCCceecEEEeC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLKGV---EFEYIEEDIFNKSTELLELNPVHKKVPVLVHD 60 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~gi---~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~ 60 (227)
.+++|+.++||+|..+.-++...-- ..+...+|.... +++.....-. .+|++..+
T Consensus 136 ~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~-~~~~~~~~V~-~vPtl~i~ 193 (215)
T TIGR02187 136 RIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANEN-PDLAEKYGVM-SVPKIVIN 193 (215)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCCC-HHHHHHhCCc-cCCEEEEe
Confidence 4677899999999988877765321 233334554433 3344333333 59999853
No 184
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=51.23 E-value=53 Score=22.49 Aligned_cols=53 Identities=13% Similarity=0.006 Sum_probs=31.3
Q ss_pred eEEe-cccCChHHHHHHHHHHhhCCC---ceEEEccCCCCchhHHhhCCCCceecEEEe
Q 046710 5 VKLL-GFWCSPFAFRVVWALKLKGVE---FEYIEEDIFNKSTELLELNPVHKKVPVLVH 59 (227)
Q Consensus 5 ~~Ly-~~~~s~~~~~v~~~L~~~gi~---y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~ 59 (227)
+.++ +-++|++|+.++-+|+...-. .+...++... .+++....... .+|++..
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~-~~~l~~~~~v~-~vPt~~i 81 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFDE-DKEKAEKYGVE-RVPTTIF 81 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCCc-CHHHHHHcCCC-cCCEEEE
Confidence 4555 557999999887777654322 2334444433 34455444433 6999983
No 185
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=46.77 E-value=75 Score=20.99 Aligned_cols=52 Identities=15% Similarity=-0.015 Sum_probs=30.0
Q ss_pred eEEecccCChHHHHHHHHH--------HhhCCCceEEEccCCCC---chhHHhhCCCCceecEEE
Q 046710 5 VKLLGFWCSPFAFRVVWAL--------KLKGVEFEYIEEDIFNK---STELLELNPVHKKVPVLV 58 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L--------~~~gi~y~~~~v~~~~~---~~~~~~~~p~g~~vP~L~ 58 (227)
+..|+.++|++|+...-.+ ...+ .+....++.... ...+....... .+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~-~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVF-GPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCC-CCCEEE
Confidence 5677888999999876433 1122 455555665432 23444333333 599887
No 186
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=46.77 E-value=23 Score=24.38 Aligned_cols=25 Identities=12% Similarity=0.352 Sum_probs=21.0
Q ss_pred cEEE-eCCeeeeehHHHHHHHhhhCC
Q 046710 55 PVLV-HDKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 55 P~L~-~~g~~l~es~aI~~yL~~~~~ 79 (227)
|.+. .+|.+++.|..|++++++++.
T Consensus 3 ~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 3 PKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred ceEEEECCEEEEeHHHHHHHHCcchH
Confidence 4444 689999999999999999875
No 187
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=45.62 E-value=38 Score=25.24 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=26.4
Q ss_pred ceEEecccCChHHHH----HHHHHHhh-CCCceEEEccCCC
Q 046710 4 KVKLLGFWCSPFAFR----VVWALKLK-GVEFEYIEEDIFN 39 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~----v~~~L~~~-gi~y~~~~v~~~~ 39 (227)
++++|+...||||.. ++-+++.. ++.++.+++.+..
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~~ 41 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLRP 41 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSST
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEecccccc
Confidence 378999999999874 44455555 8888888877553
No 188
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=44.29 E-value=21 Score=26.71 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=26.4
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q 046710 115 SKGEEKQKAMKEAVESLEKIEEVLGGKNFMGGN 147 (227)
Q Consensus 115 ~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~ 147 (227)
.+++........+.+-++.+|..|...++..+.
T Consensus 84 ~tg~k~~~Fk~~~VkrF~Eme~~l~~~~~~~~~ 116 (167)
T COG3646 84 LTGEKVRQFKAALVKRFDEMEEALAERAFARAL 116 (167)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 456677788888999999999999888876653
No 189
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=41.57 E-value=1.1e+02 Score=20.69 Aligned_cols=57 Identities=12% Similarity=0.008 Sum_probs=30.7
Q ss_pred eEEecccCChHHHHHHHHHHh-----hCCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCee
Q 046710 5 VKLLGFWCSPFAFRVVWALKL-----KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRV 63 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~-----~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~ 63 (227)
+..|+.++|+.|+...-.++. .+.......++.... ..+.....-. .+|++. .+|..
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~-~~l~~~~~V~-~~Pt~~i~~~g~~ 91 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHE-RRLARKLGAH-SVPAIVGIINGQV 91 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEecccc-HHHHHHcCCc-cCCEEEEEECCEE
Confidence 456788899999866544322 222344445554432 2333322323 699887 46643
No 190
>PRK09381 trxA thioredoxin; Provisional
Probab=40.84 E-value=1.1e+02 Score=20.37 Aligned_cols=58 Identities=9% Similarity=-0.083 Sum_probs=33.4
Q ss_pred eEEecccCChHHHHHHHHHHh----hCCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKL----KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~----~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l 64 (227)
+..|+.++||.|+...-.++. .+-.+....++...........+.. .+|+++ .+|..+
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~~ 88 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIR--GIPTLLLFKNGEVA 88 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChhHHHhCCCC--cCCEEEEEeCCeEE
Confidence 456677889999977644433 2223455556655433333345553 699887 466544
No 191
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=40.08 E-value=1.1e+02 Score=23.52 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=33.2
Q ss_pred ceEEecc---cCChHHHHHHHHHHhhC-----CCceEEEccCCCCchhHHhhCCCCceecEEE--eCCee
Q 046710 4 KVKLLGF---WCSPFAFRVVWALKLKG-----VEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRV 63 (227)
Q Consensus 4 ~~~Ly~~---~~s~~~~~v~~~L~~~g-----i~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~ 63 (227)
.+.+|.. ++||.|+.+.=.+++.. +.+..+.++... .+.+....--- .+|++. .+|..
T Consensus 22 ~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~-~~~l~~~~~V~-~~Pt~~~f~~g~~ 89 (215)
T TIGR02187 22 EIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE-DKEEAEKYGVE-RVPTTIILEEGKD 89 (215)
T ss_pred EEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcc-cHHHHHHcCCC-ccCEEEEEeCCee
Confidence 4667777 88999998777775542 333344444322 33343333333 599998 35543
No 192
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=38.90 E-value=34 Score=20.83 Aligned_cols=32 Identities=19% Similarity=-0.110 Sum_probs=20.3
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
.+||......-++.++-.|+..||++....-.
T Consensus 1 ~~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 1 KKLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred CEEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 36787776667999999999999998876543
No 193
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=38.85 E-value=51 Score=25.35 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=24.5
Q ss_pred CceEEecccCChHHHHH----HHHHHhhCCCceEEEccC
Q 046710 3 TKVKLLGFWCSPFAFRV----VWALKLKGVEFEYIEEDI 37 (227)
Q Consensus 3 ~~~~Ly~~~~s~~~~~v----~~~L~~~gi~y~~~~v~~ 37 (227)
++|.+|+...||||... .-++...+++++.+++.+
T Consensus 1 ~~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 1 PKIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred CceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 36899999999998754 444455667666666643
No 194
>PHA03075 glutaredoxin-like protein; Provisional
Probab=37.65 E-value=69 Score=22.45 Aligned_cols=69 Identities=20% Similarity=0.224 Sum_probs=48.0
Q ss_pred CCCceEEecccCChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCC-eeeeehHHHHHHHhhhC
Q 046710 1 MTTKVKLLGFWCSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDK-RVIVESFVFLEYIDETW 78 (227)
Q Consensus 1 M~~~~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g-~~l~es~aI~~yL~~~~ 78 (227)
|...+.|+|=|.|+-|+.+.-+|....=+|+...|+.... .+. -| ++-+|..|+ ..+- ..+.+||+..+
T Consensus 1 mK~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf----FsK--~g-~v~~lg~d~~y~lI--nn~~~~lgne~ 70 (123)
T PHA03075 1 MKKTLILFGKPLCSVCESISEALKELEDEYDILRVNILSF----FSK--DG-QVKVLGMDKGYTLI--NNFFKHLGNEY 70 (123)
T ss_pred CCceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee----ecc--CC-ceEEEecccceehH--HHHHHhhcccE
Confidence 6667899999999999999999988888899988875431 111 14 788887543 3222 24567776644
No 195
>PRK10996 thioredoxin 2; Provisional
Probab=36.48 E-value=1.6e+02 Score=20.98 Aligned_cols=58 Identities=5% Similarity=-0.014 Sum_probs=33.9
Q ss_pred eEEecccCChHHHHHHHHHHh----hCCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKL----KGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVI 64 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~----~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l 64 (227)
+..|+.++|+.|+...-.+.. .+-.+....++......-....+-. .+|++. .+|..+
T Consensus 56 vv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~V~--~~Ptlii~~~G~~v 119 (139)
T PRK10996 56 VIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTEAERELSARFRIR--SIPTIMIFKNGQVV 119 (139)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCHHHHHhcCCC--ccCEEEEEECCEEE
Confidence 456778899999976544433 2223555556655433333344443 599988 466544
No 196
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=35.94 E-value=1.4e+02 Score=20.40 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=13.0
Q ss_pred eEEecccCChHHHHHH
Q 046710 5 VKLLGFWCSPFAFRVV 20 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~ 20 (227)
+..|+.++|++|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 5667888999999875
No 197
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=34.24 E-value=77 Score=25.80 Aligned_cols=56 Identities=18% Similarity=0.041 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCC----CCceecEEEeCCeeeeehHHHHH
Q 046710 16 AFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNP----VHKKVPVLVHDKRVIVESFVFLE 72 (227)
Q Consensus 16 ~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p----~g~~vP~L~~~g~~l~es~aI~~ 72 (227)
|..||.+|+-.+|.|++..|++.. ...++..+-. .- .+|.+-.+|..|...--|.+
T Consensus 150 C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~-~LPrVFV~GryIGgaeeV~~ 210 (281)
T KOG2824|consen 150 CNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAV-SLPRVFVKGRYIGGAEEVVR 210 (281)
T ss_pred HHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccC-ccCeEEEccEEeccHHHhhh
Confidence 779999999999999999999874 4444443321 23 68966678888776665554
No 198
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=34.06 E-value=83 Score=19.65 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=27.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~v~ 36 (227)
.-+..|+....+.++.-.|...|++++.+++.
T Consensus 3 ~~~i~F~st~~a~~~ek~lk~~gi~~~liP~P 34 (73)
T PF11823_consen 3 YYLITFPSTHDAMKAEKLLKKNGIPVRLIPTP 34 (73)
T ss_pred eEEEEECCHHHHHHHHHHHHHCCCcEEEeCCC
Confidence 45666777788999999999999999998875
No 199
>PRK09266 hypothetical protein; Provisional
Probab=31.98 E-value=88 Score=25.09 Aligned_cols=56 Identities=13% Similarity=0.113 Sum_probs=38.4
Q ss_pred HHHhhCCCceEEEccCCC--C-chhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 22 ALKLKGVEFEYIEEDIFN--K-STELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 22 ~L~~~gi~y~~~~v~~~~--~-~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
.+...|+++++..+++.+ . .+-|..-+-.| -+||-..|+..+.....|.+.|.+.|
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~g-i~pV~~i~~~~~~~~~~~~~~l~~~~ 258 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRG-QRAVSAIDDVALPDSHALLELLRRAY 258 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccc-eEEEEEECCEECCCCchHHHHHHHHH
Confidence 345568999999888654 2 23344334455 89999988888765567777776665
No 200
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=31.79 E-value=1.3e+02 Score=18.74 Aligned_cols=25 Identities=12% Similarity=0.230 Sum_probs=21.4
Q ss_pred eecEEEeCCeeeeehHHHHHHHhhhC
Q 046710 53 KVPVLVHDKRVIVESFVFLEYIDETW 78 (227)
Q Consensus 53 ~vP~L~~~g~~l~es~aI~~yL~~~~ 78 (227)
+=||+..+| ..+|-.+|.+||.+..
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCC
Confidence 579998888 8899999999999933
No 201
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=30.89 E-value=1.6e+02 Score=19.26 Aligned_cols=52 Identities=4% Similarity=-0.210 Sum_probs=29.9
Q ss_pred eEEecccCChHHHHHHHHHHhhCC----CceEEEccCCCCchhHHhhCCCCceecEEE
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGV----EFEYIEEDIFNKSTELLELNPVHKKVPVLV 58 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi----~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~ 58 (227)
+..|+.++|+.|+...-.+....- .+....++..+...-..+.+- . .+|++.
T Consensus 22 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~~~~~~~~~~v-~-~~Pt~~ 77 (101)
T cd03003 22 FVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGDDRMLCRSQGV-N-SYPSLY 77 (101)
T ss_pred EEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCccHHHHHHcCC-C-ccCEEE
Confidence 456788899999976655544322 244455665543322223343 3 699987
No 202
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=30.30 E-value=1.5e+02 Score=18.97 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=32.7
Q ss_pred eEEecccCChHHHHHHHHHHhhCC----CceEEEccCCCCchhHH-hhCCCCceecEEE--eCCee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGV----EFEYIEEDIFNKSTELL-ELNPVHKKVPVLV--HDKRV 63 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi----~y~~~~v~~~~~~~~~~-~~~p~g~~vP~L~--~~g~~ 63 (227)
+..|+.++|+.|+...-.+....- .+....++.... ..+. ..+-. .+|+++ .+|..
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~~~~~i~--~~Pt~~~~~~g~~ 78 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDAQ-PQIAQQFGVQ--ALPTVYLFAAGQP 78 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccCC-HHHHHHcCCC--CCCEEEEEeCCEE
Confidence 455677889999977666654321 244455655443 3343 34443 599998 46644
No 203
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=29.08 E-value=76 Score=25.41 Aligned_cols=21 Identities=10% Similarity=-0.001 Sum_probs=17.3
Q ss_pred ceEEecccCChHHHHHHHHHH
Q 046710 4 KVKLLGFWCSPFAFRVVWALK 24 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~ 24 (227)
.+.+|..+.||||++..--+.
T Consensus 120 ~I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 120 IVYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEEECCCChhHHHHHHHHH
Confidence 467889999999999877654
No 204
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=28.26 E-value=69 Score=24.30 Aligned_cols=22 Identities=18% Similarity=0.058 Sum_probs=18.6
Q ss_pred ceEEecccCChHHHHHHHHHHh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKL 25 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~ 25 (227)
.+.+|..+.||||++..-.+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhh
Confidence 4678889999999999888764
No 205
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=28.10 E-value=87 Score=19.72 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=17.4
Q ss_pred eEEecccCChHHHHHHHHHHhh
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK 26 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~ 26 (227)
+.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 4678889999999877777654
No 206
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=28.10 E-value=2e+02 Score=19.73 Aligned_cols=60 Identities=10% Similarity=-0.010 Sum_probs=31.4
Q ss_pred eEEecccCChHHHHHHHHHHhh------CCCceEEEccCCCCchhHHhhCCCCceecEEE--e-CCeeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK------GVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--H-DKRVIV 65 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~------gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~-~g~~l~ 65 (227)
+.-|+-++|+.|+...-.+... +..|..+.++-.. .+.....+..|+-+|++. + +|..+.
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~-~~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDDE-EPKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCC-CchhhhcccCCCccceEEEECCCCCCch
Confidence 4456778999999775555442 2234444444221 111123444432499988 3 565543
No 207
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=27.79 E-value=2e+02 Score=19.43 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=33.5
Q ss_pred eEEecccCChHHHHHHHHHHhhCC---CceEEEccCCCCchhHHhhCCCCceecEEE--eCCeeeee
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGV---EFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVIVE 66 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi---~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l~e 66 (227)
+..|+.++|+.|+.+.-.++...- ......++.... .+....--. .+|++. .+|..+..
T Consensus 28 vv~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~~~--~l~~~~~i~-~~Pt~~~f~~G~~v~~ 91 (113)
T cd02957 28 VVHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAEKA--FLVNYLDIK-VLPTLLVYKNGELIDN 91 (113)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEchhh--HHHHhcCCC-cCCEEEEEECCEEEEE
Confidence 346777899999877666554211 123344554433 444332323 699998 47766544
No 208
>PTZ00102 disulphide isomerase; Provisional
Probab=27.28 E-value=4.2e+02 Score=23.05 Aligned_cols=73 Identities=11% Similarity=-0.035 Sum_probs=42.5
Q ss_pred eEEecccCChHHHHHHHHHH-------hhCCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCeee-----eehHHH
Q 046710 5 VKLLGFWCSPFAFRVVWALK-------LKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKRVI-----VESFVF 70 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~-------~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~~l-----~es~aI 70 (227)
+..|+.++|+.|++..=.+. ..+-++....++......-..+.+-. .+|++. .+|..+ .....|
T Consensus 53 lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i~--~~Pt~~~~~~g~~~~y~g~~~~~~l 130 (477)
T PTZ00102 53 LVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGVR--GYPTIKFFNKGNPVNYSGGRTADGI 130 (477)
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCCC--cccEEEEEECCceEEecCCCCHHHH
Confidence 56778899999997642222 22334666666654433322344443 489886 344322 235678
Q ss_pred HHHHhhhCC
Q 046710 71 LEYIDETWP 79 (227)
Q Consensus 71 ~~yL~~~~~ 79 (227)
..|+.+...
T Consensus 131 ~~~l~~~~~ 139 (477)
T PTZ00102 131 VSWIKKLTG 139 (477)
T ss_pred HHHHHHhhC
Confidence 888888654
No 209
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=25.78 E-value=1.2e+02 Score=23.85 Aligned_cols=23 Identities=4% Similarity=-0.008 Sum_probs=18.6
Q ss_pred ceEEecccCChHHHHHHHHHHhh
Q 046710 4 KVKLLGFWCSPFAFRVVWALKLK 26 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~~ 26 (227)
.+.+|..+.||||++..=-+...
T Consensus 110 ~I~vFtDp~CpyCkkl~~~l~~~ 132 (232)
T PRK10877 110 VITVFTDITCGYCHKLHEQMKDY 132 (232)
T ss_pred EEEEEECCCChHHHHHHHHHHHH
Confidence 47889999999999987666553
No 210
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=25.73 E-value=1.8e+02 Score=18.43 Aligned_cols=56 Identities=5% Similarity=-0.015 Sum_probs=31.4
Q ss_pred eEEecccCChHHHHHHHHHHhh----CCCceEEEccCCCCchhHHhhCCCCceecEEE--eCCe
Q 046710 5 VKLLGFWCSPFAFRVVWALKLK----GVEFEYIEEDIFNKSTELLELNPVHKKVPVLV--HDKR 62 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~----gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~--~~g~ 62 (227)
+..++.++|+.|+...-.+... +-.+....++...........+- . .+|++. .+|.
T Consensus 18 vi~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v-~-~~P~~~~~~~g~ 79 (101)
T TIGR01068 18 LVDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNVDENPDIAAKYGI-R-SIPTLLLFKNGK 79 (101)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC-C-cCCEEEEEeCCc
Confidence 4456777899999776555432 22355555664433332334444 3 599887 3554
No 211
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=25.65 E-value=79 Score=21.07 Aligned_cols=35 Identities=17% Similarity=0.080 Sum_probs=20.6
Q ss_pred ceEEecccCChHHHHHHHHHHh-----h--CCCceEEEccCC
Q 046710 4 KVKLLGFWCSPFAFRVVWALKL-----K--GVEFEYIEEDIF 38 (227)
Q Consensus 4 ~~~Ly~~~~s~~~~~v~~~L~~-----~--gi~y~~~~v~~~ 38 (227)
.+.+|+.+.||||++..-.+.. . .-.+..+.++..
T Consensus 8 ~v~~F~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (112)
T PF13098_consen 8 IVVVFTDPWCPYCKKLEKELFPDNDVARYLKDDFQVIFVNID 49 (112)
T ss_dssp EEEEEE-TT-HHHHHHHHHHHHHHHHHCEEHCECEEEECESH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 3567788999999988665552 1 113556666554
No 212
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=25.28 E-value=3.6e+02 Score=21.66 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=41.3
Q ss_pred ehHHHHHHHhhhCCCCCCCCCCHHHHHHHHHHHHHhhhhchHHHHHhhccCchHHHHHHHHHHHHHHHHHHHh
Q 046710 66 ESFVFLEYIDETWPQDPLLPQDPYEKAMARFWAKFGDEKLLESAYKAMWSKGEEKQKAMKEAVESLEKIEEVL 138 (227)
Q Consensus 66 es~aI~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L 138 (227)
|-..|-..+.+... -..-|+|+..-+.|...+...=+-.+..+..++ .++.+++++..-+..||..|
T Consensus 5 E~qLI~~lf~RL~~-ae~~prD~eAe~lI~~~~~~qP~A~Y~laQ~vl-----vQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQ-AEAQPRDPEAEALIAQALARQPDAPYYLAQTVL-----VQEQALKQAQARIQELEAQL 71 (247)
T ss_pred HHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHhCCchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 34455566666543 113388887777777666543333233333333 57888888888899999987
No 213
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=24.99 E-value=1.1e+02 Score=19.70 Aligned_cols=43 Identities=16% Similarity=0.351 Sum_probs=27.5
Q ss_pred CccccCCCCchhHHHHHhHHhHHHHHhHhcCCccccCCCcchHHHHHHHHHh
Q 046710 141 KNFMGGNSIGYLDLAIGWIGYWIPVWEEAGGSMRILDSQKFPAIAEWSTKFL 192 (227)
Q Consensus 141 ~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 192 (227)
.+|+ ..+++ |+..|+++.++.. ... ... ++.--++..|.+++.
T Consensus 34 ~ky~--t~l~~-DvL~~~ll~~L~~---~~r-~~~--k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 34 LKYF--TDLGY-DVLTFCLLERLSN---PGR-SRL--KDDGTNISQWLQSLA 76 (77)
T ss_pred Hhhc--chhhH-HHHHHHHHHHHhc---ccc-hhc--CcCCCCHHHHHHHHh
Confidence 4566 23444 8888888888842 112 333 455578999998875
No 214
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=23.96 E-value=2.3e+02 Score=19.01 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=39.2
Q ss_pred EecccCChHHHHHHHHHHhhCC--CceEEEccC-CCCc-hhHHhhC---CCCceecEEEeCCe-eeeehHHHHHHHhhh
Q 046710 7 LLGFWCSPFAFRVVWALKLKGV--EFEYIEEDI-FNKS-TELLELN---PVHKKVPVLVHDKR-VIVESFVFLEYIDET 77 (227)
Q Consensus 7 Ly~~~~s~~~~~v~~~L~~~gi--~y~~~~v~~-~~~~-~~~~~~~---p~g~~vP~L~~~g~-~l~es~aI~~yL~~~ 77 (227)
|+|...||+|.+..-.+..... .++.+.+.. .... .....++ ... .+-+ ..+|. ...++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADS-RLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcC-eeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 5677789999988877777765 344444411 1111 1111222 222 3333 55665 889999998865543
No 215
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=23.11 E-value=1.3e+02 Score=22.35 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=21.1
Q ss_pred eEEecccCChHHHHHHH----HHHhhCCCceEEEcc
Q 046710 5 VKLLGFWCSPFAFRVVW----ALKLKGVEFEYIEED 36 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~----~L~~~gi~y~~~~v~ 36 (227)
+++|+...||||....- +....++.++.+++.
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~~ 36 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPIL 36 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeeee
Confidence 46889999999985433 333456666665553
No 216
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=22.95 E-value=1.6e+02 Score=20.07 Aligned_cols=29 Identities=21% Similarity=0.049 Sum_probs=23.0
Q ss_pred EEecccCChHHHHHHHHHHhhCCCceEEE
Q 046710 6 KLLGFWCSPFAFRVVWALKLKGVEFEYIE 34 (227)
Q Consensus 6 ~Ly~~~~s~~~~~v~~~L~~~gi~y~~~~ 34 (227)
.|...+..|...-++.+.+++|+|+++..
T Consensus 59 vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 59 VLVRDPDDPDLAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred EEECCCCCccHHHHHHHHHHcCCcEEEeC
Confidence 45555677888899999999999988764
No 217
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=22.50 E-value=1.4e+02 Score=21.89 Aligned_cols=29 Identities=17% Similarity=0.130 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHhhCCCceEEEccCCCC
Q 046710 12 CSPFAFRVVWALKLKGVEFEYIEEDIFNK 40 (227)
Q Consensus 12 ~s~~~~~v~~~L~~~gi~y~~~~v~~~~~ 40 (227)
.-+.++.++-.|++.|++|+.........
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saHR~ 40 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAHRT 40 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TTTS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeccCC
Confidence 44789999999999999999877765443
No 218
>PF03711 OKR_DC_1_C: Orn/Lys/Arg decarboxylase, C-terminal domain; InterPro: IPR008286 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 3Q16_C 3N75_A 2X3L_A 2VYC_D.
Probab=21.80 E-value=45 Score=24.05 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=23.1
Q ss_pred chhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhh
Q 046710 41 STELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDET 77 (227)
Q Consensus 41 ~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~ 77 (227)
+.++.-.-|.| +|+|+.+...=.++..|++||...
T Consensus 78 sae~i~pYPPG--IPll~pGE~it~~~~~~i~yl~~l 112 (136)
T PF03711_consen 78 SAEFIVPYPPG--IPLLVPGERITEETEEIIDYLLAL 112 (136)
T ss_dssp BSS-BEECTTT--S-SB-TTEEB-STTHHHHHHHHHH
T ss_pred EEeeeeecCCC--CcEECCccccccchHHHHHHHHHH
Confidence 44555556777 999998776666789999999764
No 219
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=21.76 E-value=2.3e+02 Score=23.98 Aligned_cols=70 Identities=24% Similarity=0.386 Sum_probs=44.0
Q ss_pred EEeccc---CChHHHHHHHHHHhhCCCceEEEccCCCCchhHHhhCCCCceecEEEeCCeeeeehHHHHHHHhhhCCCCC
Q 046710 6 KLLGFW---CSPFAFRVVWALKLKGVEFEYIEEDIFNKSTELLELNPVHKKVPVLVHDKRVIVESFVFLEYIDETWPQDP 82 (227)
Q Consensus 6 ~Ly~~~---~s~~~~~v~~~L~~~gi~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~~~g~~l~es~aI~~yL~~~~~~~~ 82 (227)
-+||.. .|+|.+..--.+...| |..+..+....+.+ | . ..|.+-++|.+ -|-..++.++-+.+++.+
T Consensus 80 l~HGL~G~s~s~y~r~L~~~~~~rg--~~~Vv~~~Rgcs~~-----~-n-~~p~~yh~G~t-~D~~~~l~~l~~~~~~r~ 149 (345)
T COG0429 80 LFHGLEGSSNSPYARGLMRALSRRG--WLVVVFHFRGCSGE-----A-N-TSPRLYHSGET-EDIRFFLDWLKARFPPRP 149 (345)
T ss_pred EEeccCCCCcCHHHHHHHHHHHhcC--CeEEEEecccccCC-----c-c-cCcceecccch-hHHHHHHHHHHHhCCCCc
Confidence 455544 5566666666667777 88887775432211 2 2 57888887766 666677777777677666
Q ss_pred CCC
Q 046710 83 LLP 85 (227)
Q Consensus 83 l~p 85 (227)
++.
T Consensus 150 ~~a 152 (345)
T COG0429 150 LYA 152 (345)
T ss_pred eEE
Confidence 543
No 220
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=21.52 E-value=52 Score=22.98 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhCCCceEEEccCCC-CchhHHhhCCCCceecEEEe---CCeeeeehHHHHHHHhhhCC
Q 046710 15 FAFRVVWALKLKGVEFEYIEEDIFN-KSTELLELNPVHKKVPVLVH---DKRVIVESFVFLEYIDETWP 79 (227)
Q Consensus 15 ~~~~v~~~L~~~gi~y~~~~v~~~~-~~~~~~~~~p~g~~vP~L~~---~g~~l~es~aI~~yL~~~~~ 79 (227)
|....+=+++..|++.+...++-.. ...+-....|+.+.+|.++| ...+.-|..-|+.|+.+..-
T Consensus 24 fP~LakEl~e~~g~~I~~~r~~~~~~l~~e~~~~~~~sGy~PtViD~lrRC~T~EEALEVInylek~GE 92 (128)
T PF09868_consen 24 FPALAKELEEEEGISIEGYRLDEEQVLEEEEEEPDDFSGYNPTVIDYLRRCKTDEEALEVINYLEKRGE 92 (128)
T ss_pred hHHHHHHHhccCCCceeeeechhhhhhhhccccCCCccCCCChHHHHHHHhCcHHHHHHHHHHHHHhCC
Confidence 4455666777788887766554221 11111123344448898885 35677788899999988743
No 221
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=20.57 E-value=2.7e+02 Score=18.40 Aligned_cols=55 Identities=9% Similarity=0.007 Sum_probs=31.3
Q ss_pred eEEecccCChHHHHHHHHHHhhC------C----CceEEEccCCCCchhHH-hhCCCCceecEEE--eCCe
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKG------V----EFEYIEEDIFNKSTELL-ELNPVHKKVPVLV--HDKR 62 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~g------i----~y~~~~v~~~~~~~~~~-~~~p~g~~vP~L~--~~g~ 62 (227)
+..|+.++|+.|+...-.+.... . .+....++.... ..+. ..+- . .+|++. .+|.
T Consensus 22 lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~-~~l~~~~~v-~-~~Ptl~~~~~g~ 89 (108)
T cd02996 22 LVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKE-SDIADRYRI-N-KYPTLKLFRNGM 89 (108)
T ss_pred EEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCC-HHHHHhCCC-C-cCCEEEEEeCCc
Confidence 45677889999997766554321 1 234445554443 3333 3343 3 699987 3554
No 222
>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.
Probab=20.37 E-value=2.5e+02 Score=18.24 Aligned_cols=52 Identities=8% Similarity=-0.086 Sum_probs=29.1
Q ss_pred eEEecccCChHHHHHHHHHHhhCC----CceEEEccCCCCchhHHhhCCCCceecEEE
Q 046710 5 VKLLGFWCSPFAFRVVWALKLKGV----EFEYIEEDIFNKSTELLELNPVHKKVPVLV 58 (227)
Q Consensus 5 ~~Ly~~~~s~~~~~v~~~L~~~gi----~y~~~~v~~~~~~~~~~~~~p~g~~vP~L~ 58 (227)
+..|+.++|+.|+...=.+....- .+....++.... ..+.....-. .+|++.
T Consensus 23 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~i~-~~Pt~~ 78 (104)
T cd03004 23 LVDFYAPWCGPCQALLPELRKAARALKGKVKVGSVDCQKY-ESLCQQANIR-AYPTIR 78 (104)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECCch-HHHHHHcCCC-cccEEE
Confidence 456778899999876554443221 234445555433 3343322323 699887
Done!