BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046711
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 68 KYVWKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTVENV 127
K+ W I NFS+ S F G +KW+I + P G ++ DHLSM+L + +
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPY 112
Query: 128 --QVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELNDPE 185
YA+F+L + +Q+ + V+ + H F+ +S WG F+ LSEL DP
Sbjct: 113 GWSRYAQFSLAVVNQIHTR---YTVRKETQHQ-----FNARESDWGFTSFMPLSELYDPS 164
Query: 186 TGFLVNDVCVVEAEVTVLGI 205
G+LVND +VEAEV V +
Sbjct: 165 RGYLVNDTVLVEAEVAVRKV 184
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 5 ERRFNGLKLQWGLDQFIPLEAFNDSTNGYLVKDTCVFGAEVFVKE 49
+ +FN + WG F+PL D + GYLV DT + AEV V++
Sbjct: 139 QHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 17/144 (11%)
Query: 66 SSKYVWKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTVE 125
S K+ W I F++L S F G +KW+I + P G ++ DHLSM+L + +
Sbjct: 53 SLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVAD--AA 107
Query: 126 NVQV----YAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
N+ Y++F+L + +Q+ N + ++ + H F+ +S WG F+ LSEL
Sbjct: 108 NLPYGWSRYSQFSLAVVNQVN---NRYSIRKETQHQ-----FNARESDWGFTSFMPLSEL 159
Query: 182 NDPETGFLVNDVCVVEAEVTVLGI 205
+P G+LVND ++EAEV V +
Sbjct: 160 YEPTRGYLVNDTVLIEAEVAVRKV 183
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 5 ERRFNGLKLQWGLDQFIPLEAFNDSTNGYLVKDTCVFGAEVFVKE 49
+ +FN + WG F+PL + T GYLV DT + AEV V++
Sbjct: 138 QHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 16 GLDQFIPLEAFNDSTNGYLVKDTCVFGAEVFVKERSRVKGECLS-----MEKY--AYSSK 68
G FI L + + NG+LV +T + R+ S +KY +
Sbjct: 1125 GYGSFIGLFSLLNPNNGFLVNNTI----------KVRIDAAPTSPLVNTYDKYNIGLNQA 1174
Query: 69 YVWKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTVENVQ 128
+ + + SK + S F + KW I+++P G +++++S+FL + ENV
Sbjct: 1175 FSYSVPMMSKKSEPFI-SPIFMSCGRKWIIKIYPMGQP--SSNYMSVFLEYRDEGEENVH 1231
Query: 129 VYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFW----FHTPKSSWGCPRFVSLSELNDP 184
F+L + QL ++ K+W F++ +S+G P+F+ +S L DP
Sbjct: 1232 ----FSLELISQLYPEQSI------------KYWVQYRFNSKSNSFGYPKFIGVSTLMDP 1275
Query: 185 ETGFLVNDVCVVEAEVTVL 203
+ GFLVND ++ + L
Sbjct: 1276 DMGFLVNDTIILNVSILQL 1294
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F AG + KW + ++P G+D + D+LS++L+L
Sbjct: 98 YMWTINNFSFCREEMGEVLK-SSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLL-- 154
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+V A+F I +N + + ++ + + F K WG +F+ L
Sbjct: 155 VQCNKSEVRAKFKFSI-------LNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 206
Query: 182 NDPETGFLVNDVCVVEAEVTVLG 204
D G L D + EV+V+
Sbjct: 207 LDEANGLLPGDRLSIFCEVSVVA 229
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 68 KYVWKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFT--VE 125
K W I+ FS + F G +KW I ++P G D+ +HLS+FL + + +
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDV--CNHLSLFLCVAHHEKLLP 127
Query: 126 NVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELNDPE 185
+A+FT+ + N K +++FW + WG +F+ L +L +
Sbjct: 128 GWSHFAQFTIAV-------SNKDPKKSKHSDTLHRFWKK--EHDWGWKKFIELPKLKE-- 176
Query: 186 TGFLVNDVCV-VEAEVTVL 203
GF+ + C+ ++A+V V+
Sbjct: 177 -GFIDDSGCLTIKAQVQVI 194
>sp|Q13077|TRAF1_HUMAN TNF receptor-associated factor 1 OS=Homo sapiens GN=TRAF1 PE=1 SV=1
Length = 416
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 60 MEKYAYSSKYVWKIDNFSKL----GAGYKES---QAFGAGNHKWKI--ELHPAGIDIGAA 110
ME+ ++ ++WKI N ++ G S AF + +K+ L+ G G
Sbjct: 260 MEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKR 319
Query: 111 DHLSMFLILENFTVENVQVYA---EFTLRIWDQLGQSMNLFKVKCVSLHAINKFW----- 162
HLS+F+++ + + + + T + DQ + HAI+ F
Sbjct: 320 THLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNRE-----------HAIDAFRPDLSS 368
Query: 163 --FHTPKS----SWGCPRFVSLSELNDPETGFLVNDV----CVVE 197
F P+S + GCP F LS+L P+ ++ +D C+VE
Sbjct: 369 ASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVE 413
>sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4
PE=2 SV=2
Length = 370
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 69 YVWKIDNFS---KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILENF 122
Y W I NFS + Y S F ++ W + ++P G+D D++S++LIL
Sbjct: 22 YRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLIL--L 79
Query: 123 TVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELN 182
+ E V+A+F + I + G+ N + I F P +G +F++
Sbjct: 80 SCEKGSVWAKFEVCILNAKGEKCNTER--------IPSFSRIQPHQPFGFEKFITRDSFL 131
Query: 183 DPETGFLVNDVCVVEAEVTVLGIS 206
P +D + +V+VL S
Sbjct: 132 SPAQVLTPDDKFTLLCKVSVLQDS 155
>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2
PE=2 SV=2
Length = 364
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 69 YVWKIDNFSKLGAGYK---ESQAFG-AGNHK--WKIELHPAGIDIGAADHLSMFLILENF 122
Y W I NFS G + +S F N + W + +HP G D + D+LS++L+L N
Sbjct: 22 YEWTISNFSFCMGGIRRKIKSPVFSLVANEEVAWCLRVHPNGFDEESKDYLSVYLVLVNC 81
Query: 123 TVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELN 182
V+ EF W + Q + +++ + + K +WG +F+ L
Sbjct: 82 PKRQVRAKFEF----WIKNSQGEKYQYTQSLNVPSFQR------KQNWGFSKFILRDSLL 131
Query: 183 DPETGFLVNDVCVVEAEVTVLG 204
L D + +V+++G
Sbjct: 132 SHRNWLLPKDKLTLCCKVSIVG 153
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 81 AGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTVENVQVYAEFTLRIWDQ 140
A + + FG G++++ ++L P G D A +LS+FL++ ++ FT+ D
Sbjct: 65 AEFMLAPKFGDGDYEFVMKLFPNGKDEETAGYLSLFLLINKCPNPRLRFRVSFTVETADG 124
Query: 141 LGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEAEV 200
+S +L K +L IN+ T +F SL L ++ ND+ + E+
Sbjct: 125 -PRSCHLNK----NLVTINRSGIVTAS------KFFSLDILRSAMNVYIPNDILTIGCEL 173
Query: 201 TVLG 204
T+ G
Sbjct: 174 TIFG 177
>sp|P39428|TRAF1_MOUSE TNF receptor-associated factor 1 OS=Mus musculus GN=Traf1 PE=1 SV=2
Length = 409
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 60 MEKYAYSSKYVWKIDNFSK------LGAGYKE-SQAFGAGNHKWKI--ELHPAGIDIGAA 110
ME+ ++ ++WKI N +K G S AF + +K+ L+ G G
Sbjct: 253 MEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKK 312
Query: 111 DHLSMFLILENFTVENVQVYA---EFTLRIWDQLGQSMNLFKVKCVSLHAINKFW----- 162
HLS+F+++ + + + + T + DQ + HAI+ F
Sbjct: 313 THLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNRE-----------HAIDAFRPDLSS 361
Query: 163 --FHTPKS----SWGCPRFVSLSELNDPETGFLVNDV----CVVE 197
F P+S + GCP F LS+L P+ ++ +D C+V+
Sbjct: 362 ASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVD 406
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 37.4 bits (85), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 59 SMEKYAYSSKYVWKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFL- 117
+E+ A++S Y W + NFS L S F AG+ W+I L P G + ++ S+FL
Sbjct: 45 DLEEAAHAS-YSWVVKNFSTL-EDKTYSPLFKAGHTTWRIVLFPKGCN--QTEYASVFLE 100
Query: 118 ILENFTVENVQVY-AEF----TLRIWDQLGQ----------SMNLFKVKCVSLHAIN--K 160
L VE ++ Y AE T I ++ +++L V+ ++ IN
Sbjct: 101 YLPQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSH 160
Query: 161 FWFHTPKSSWGCPRFVSLSELNDPETGFLV-----NDVCVVEAEVTVLGISEP 208
F + WG RFV L ++ P F V +++C+ VTV + +P
Sbjct: 161 HRFRSEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICI---SVTVRVLQDP 210
>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1
PE=2 SV=2
Length = 365
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 59 SMEKYAYSSKYVWKIDNFSKLGAGYKE---SQAFGAGNHK---WKIELHPAGIDIGAADH 112
S+EK+ Y W I NFS G + S F + +K W + ++P G D + D+
Sbjct: 16 SVEKFCYK----WTISNFSFCMGGIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKDY 71
Query: 113 LSMFLILENFTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGC 172
LS++L+L + V+A+F I + G+ K V F T + S G
Sbjct: 72 LSVYLVL--LSHLQSPVWAKFKFWIINSQGEKYQKTKSPIVEC-------FLTYEQS-GF 121
Query: 173 PRFVSLSELNDPETGFLVNDVCVVEAEVTVLG 204
+F+ L L D + +VT+LG
Sbjct: 122 KKFLPRDLLLSHRNCLLPEDQLTICCKVTILG 153
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAG---NHKWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G KW + ++P G+D + D+LS++L+L +
Sbjct: 34 YMWTINNFSFCREEMGEVLK-SSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLVS 92
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F+L +N + + ++ + + F K WG +F+ L
Sbjct: 93 CPKSEVRAKFKFSL---------LNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L +
Sbjct: 34 YMWTINNFSFCREEMGEVLK-SSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVS 92
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F+L +N + + ++ + + F K WG +F+ L
Sbjct: 93 CPKSEVRAKFKFSL---------LNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L +
Sbjct: 34 YMWTINNFSFCREEMGEVLK-SSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVS 92
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F+L +N + + ++ + + F K WG +F+ L
Sbjct: 93 CPKSEVRAKFKFSL---------LNDKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 68 KYVWKIDNFSKL---GAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTV 124
K VW I NFSK Y S G+H + + L+P G + ++ LS++L+L
Sbjct: 305 KSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNG-ETSPSNSLSLYLVL----T 359
Query: 125 ENVQVYAEFTLRIWDQLGQSMN 146
+ + + F++ I + G +N
Sbjct: 360 KGEKTFVNFSISIKNHNGNDLN 381
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F AG + KW + ++P G+D + D+LS++L+L +
Sbjct: 489 YMWTINNFSFCREEMGEVLK-SSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS 547
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F++ +N + + ++ + + F K WG +F+ L
Sbjct: 548 CNKSEVRAKFKFSI---------LNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 597
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L D + EV+V+ S
Sbjct: 598 LDEANGLLPEDKLTIFCEVSVVADS 622
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS++L+L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV- 91
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 92 -SCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|A8X2W2|BAT39_CAEBR BTB and MATH domain-containing protein 39 OS=Caenorhabditis
briggsae GN=bath-39 PE=4 SV=2
Length = 335
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 71 WKIDNFSKLGAGYKESQAFGAGNHKWKIELHPAGIDIGAADHLSMFLILENFTVENVQ-- 128
+KI NF L Y G H W + + LS++L+ T +N +
Sbjct: 19 FKIMNFEHLDGSYTSESKLENGGH-WAVRFVSSKTAKSTKRRLSVYLVCFPAT-DNPEWS 76
Query: 129 VYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSELNDPETGF 188
+ F R + G S K+ + H F +S G F + ++ P +GF
Sbjct: 77 ISTSFAFRFLNSWGNSKT--KISPLCTHT-----FTAKDNSKGASGFCAWDDIVTPNSGF 129
Query: 189 LVNDVCVVEAEVTV 202
LVN V +E ++++
Sbjct: 130 LVNGVFTIEFDLSI 143
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G + S F +G + KW + ++P G+D + D+LS++L+L +
Sbjct: 34 YMWTINNFSFCREEMGEVVR-SSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVS 92
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F+L +N + + ++ + + F K WG +F+ L
Sbjct: 93 CPKSEVRAKFKFSL---------LNAKREETKAMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS ++G K S F +G + KW + ++P G+D + D+LS+ L
Sbjct: 34 YMWTINNFSFCREEMGEVIK-SSTFSSGANDKLKWCLRVNPKGLDEESKDYLSL--YLLL 90
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
+ +V A+F I + G+ ++ + + F K WG +F+ L
Sbjct: 91 VSCPKSEVRAKFKFSILNAKGEETK-------AMESQRAYRFVQGK-DWGFKKFIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 62 KYAYSSKYVWKIDNFSKLGAGYK-----ESQAFGAGNHKWKIELHP-AGIDIGAADHLSM 115
K+ Y +K W I N+S+ Y ES F GN K+KI+ +P G+ + D LS+
Sbjct: 309 KFNYQNK--WVITNWSQKLQDYPKPKSIESPEFMVGNLKFKIQFYPNGGLSDESKDFLSI 366
Query: 116 FLI-LENFTVENVQVYAEFTLRIWDQLGQ--SMNLFKVKCVSLHAINKFWFHTPKSSWGC 172
+L ++ T VQ E + + + + S N+F H NK WG
Sbjct: 367 YLYKFDDQTPSKVQFSFELLNKDFTRNRKLASTNIF-------HTENK---------WGW 410
Query: 173 PRFVSLSELNDPETGFLVNDVCVVEAEVTVL 203
F++ S L +TGF++ + + + +L
Sbjct: 411 RSFINNS-LVTTQTGFVIQNSVTLNINIEIL 440
>sp|P70191|TRAF5_MOUSE TNF receptor-associated factor 5 OS=Mus musculus GN=Traf5 PE=1 SV=1
Length = 558
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 25/167 (14%)
Query: 60 MEKYAYSSKYVWKIDNFSKLGAGYKE-------SQAFGAGNHKWKI--ELHPAGIDIGAA 110
+E YS K +WK+ ++ E SQ F +++ + G G
Sbjct: 397 LEGACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKG 456
Query: 111 DHLSMFLILENFTVENV---QVYAEFTLRIWDQLGQSMNL---FKVKCVSLHAINKFWFH 164
HLS++ ++ +++ TL + DQ G+ ++ FK N F
Sbjct: 457 THLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKAD------PNSSSFK 510
Query: 165 TPKSSW----GCPRFVSLSELNDPETGFLVNDVCVVEAEVTVLGISE 207
P GCPRFVS S L + + ++ +D ++ V + + +
Sbjct: 511 RPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTDLED 557
>sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3
PE=2 SV=2
Length = 365
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 69 YVWKIDNFS-KLGAGYKE--SQAFGAGNHK---WKIELHPAGIDIGAADHLSMFLILENF 122
Y W I NFS +GA K S F K W + L+P G+D + D+LS++ LE
Sbjct: 22 YNWTISNFSFCMGAHQKSITSPVFSLEASKEVAWCLRLYPNGVDEESKDYLSVY--LELL 79
Query: 123 TVENVQVYAEFTLRIWDQLG---QSMNLFKVKC 152
+ + A+F I + G QS + V+C
Sbjct: 80 SALESPILAKFEFWIINSQGEKYQSRKISNVQC 112
>sp|P53911|EAF7_YEAST Chromatin modification-related protein EAF7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EAF7 PE=1
SV=1
Length = 425
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 16/68 (23%)
Query: 95 KWKIELHPAGIDIGAADHLSMFLILENFTV-----------ENVQVYAEFTLR-IWDQLG 142
+W E PAGI H MF I+E E +++ FT + IWD+L
Sbjct: 15 RWASEFKPAGI----HKHFHMFCIVERMNSPDKYPVTLLQKETMKLGKVFTAKDIWDKLS 70
Query: 143 QSMNLFKV 150
QS NL K+
Sbjct: 71 QSYNLEKI 78
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 69 YVWKIDNFS----KLGAGYKESQAFGAGNH---KWKIELHPAGIDIGAADHLSMFLILEN 121
Y+W I+NFS + G K S +F +G + KW + ++P G+D + D+LS++L+L +
Sbjct: 34 YMWTINNFSFCREETGEVLK-SSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLLLVS 92
Query: 122 FTVENVQVYAEFTLRIWDQLGQSMNLFKVKCVSLHAINKFWFHTPKSSWGCPRFVSLSEL 181
V+ +F+L +N + ++ + + F K WG +++ L
Sbjct: 93 CPKNEVRAKFKFSL---------LNSKNEETKAMESQRAYRFVQGK-DWGFKKYIRRDFL 142
Query: 182 NDPETGFLVNDVCVVEAEVTVLGIS 206
D G L +D + EV+V+ S
Sbjct: 143 LDEANGLLPDDKLTLYCEVSVVQDS 167
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 158 INKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEA 198
I+ +FH ++ WG F++ SE+ DPE GF+ +D E
Sbjct: 155 ISHLFFHK-ENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEV 194
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 158 INKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEA 198
I+ +FH ++ WG F++ SE+ DPE GF+ +D E
Sbjct: 154 ISHLFFHK-ENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEV 193
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 158 INKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEA 198
I+ +FH ++ WG F++ SE+ DPE GF+ +D E
Sbjct: 155 ISHLFFHE-ENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEV 194
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 158 INKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEAEV 200
I+ +FH ++ WG F++ SE+ DPE GF+ D E V
Sbjct: 154 ISHLFFHK-ENDWGFSNFMAWSEVTDPEKGFIEEDKVTFEVYV 195
>sp|O00463|TRAF5_HUMAN TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2
Length = 557
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 60 MEKYAYSSKYVWKIDNFSKLGAGYKE-------SQAFGAGNHKWKI--ELHPAGIDIGAA 110
+E Y+ K +WK+ ++ + SQ+F +++ + G G
Sbjct: 397 LEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRG 456
Query: 111 DHLSMFLILENFTVENV---QVYAEFTLRIWDQLGQS--MNLFKVKCVSLHAINKFWFHT 165
HLS++ ++ +++ TL + DQ G+ M FK N F
Sbjct: 457 SHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD------PNSSSFKR 510
Query: 166 PKSSW----GCPRFVSLSELNDPETGFLVNDVCVVEAEVTVLGISE 207
P GCPRFV+ S L + + ++ +D ++ V + + +
Sbjct: 511 PDGEMNIASGCPRFVAHSVLENAKNAYIKDDTLFLKVAVDLTDLED 556
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 85 ESQAFGAGNHKWKIELHPAGIDI-GAADHLSMFLILENFTVENVQVYAEFTLRIWDQLGQ 143
+S F G + W I +P G + + ++S+F+ L + ++ + A F L + DQ G+
Sbjct: 47 QSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALAS---DSNDIRALFELTLMDQSGK 103
Query: 144 SMNLFKVKCVSLHAI--NKFWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVCVVEAEVT 201
+ KV A+ + S WG RF S L + +L +D V+ V
Sbjct: 104 GKH--KVHSHFDRALEGGPYTLKYKGSMWGYKRFFKRSALETSD--YLKDDCLVINCTVG 159
Query: 202 VL 203
V+
Sbjct: 160 VV 161
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 79 LGAG-YKESQAFGAGNHKWKIELHPAGIDI-GAADHLSMFLILENFTVENVQVYAEFTLR 136
+G G Y S F G + W I +P G + ++S+F+ L + E V A F L
Sbjct: 49 VGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALAS---EGADVRALFELT 105
Query: 137 IWDQLGQSMNLFKVKCVSLHAINK--FWFHTPKSSWGCPRFVSLSELNDPETGFLVNDVC 194
+ DQ G + KV A++ + S WG RF S L + +L +
Sbjct: 106 LVDQSGNGKH--KVHSHFGRALDSGPYTLKYRGSMWGYKRFFRRSSLESSD--YLKENSL 161
Query: 195 VVEAEVTVL 203
+V V V+
Sbjct: 162 LVRCRVGVV 170
>sp|P04520|DNAP_BPT4 DNA priming protein OS=Enterobacteria phage T4 GN=58-61 PE=4 SV=1
Length = 342
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 1 ALGKERRFNGLKLQWGLDQ-FIPLEAFNDSTNGY---LVKDTCVFGAE-----VFVKERS 51
A GK F G L+ Q +I +EA+ ++T Y VKD V+ E +F++
Sbjct: 187 ANGKAESFQGRALKKDAPQKYITIEAYPEATKIYGVERVKDGDVYVLEGPIDSLFIENGI 246
Query: 52 RVKGECLSMEKYAYSSKYVWKIDN 75
+ G L +E + + VW +DN
Sbjct: 247 AITGGQLDLEVVPFKDRRVWVLDN 270
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,421,240
Number of Sequences: 539616
Number of extensions: 3205009
Number of successful extensions: 4806
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4736
Number of HSP's gapped (non-prelim): 68
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)