Query 046712
Match_columns 566
No_of_seqs 273 out of 3361
Neff 10.9
Searched_HMMs 13730
Date Mon Mar 25 05:55:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046712.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046712hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.2E-32 8.8E-37 262.2 17.1 281 1-286 14-303 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 2.6E-27 1.9E-31 225.0 19.3 256 305-566 51-312 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 7.7E-25 5.6E-29 214.7 32.0 343 55-435 41-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.9E-24 1.4E-28 211.9 32.0 340 34-411 44-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 4.8E-23 3.5E-27 194.6 28.2 278 18-317 5-285 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 3.3E-22 2.4E-26 188.7 27.8 242 59-317 11-255 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 2.2E-22 1.6E-26 187.6 21.4 206 329-535 32-238 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 7E-22 5.1E-26 184.2 18.1 207 304-512 32-239 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5.7E-21 4.1E-25 175.8 19.1 199 329-535 10-208 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.7E-20 1.2E-24 172.6 20.4 202 301-511 7-208 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.5E-16 1.8E-20 151.4 34.0 135 35-190 39-174 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 1.4E-16 9.9E-21 153.3 31.7 86 453-554 267-352 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 1.1E-20 8E-25 189.5 1.2 385 131-536 3-440 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 4.6E-21 3.4E-25 192.2 -3.6 360 34-414 2-410 (460)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.3E-17 9.3E-22 151.2 16.1 202 354-556 30-235 (242)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 2E-17 1.5E-21 148.0 16.6 190 349-555 37-226 (227)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 2.1E-16 1.5E-20 141.2 17.0 202 39-282 24-225 (227)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 9E-17 6.6E-21 145.5 13.4 219 307-530 11-233 (242)
19 d2astb2 c.10.1.3 (B:2136-2419) 99.7 3.2E-17 2.4E-21 151.6 8.1 180 353-532 46-235 (284)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.1E-15 8.1E-20 133.1 17.2 176 335-551 24-199 (199)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.5E-15 1.1E-19 132.3 16.3 148 56-214 38-185 (199)
22 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 3.1E-16 2.2E-20 135.9 11.5 123 42-167 16-139 (192)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.6E-15 1.2E-19 133.2 15.9 165 56-258 44-208 (210)
24 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.4E-15 1.8E-19 132.1 16.1 164 34-210 46-209 (210)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 3.2E-16 2.4E-20 144.8 9.3 61 351-411 173-235 (284)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 1.8E-15 1.3E-19 130.9 12.5 173 379-559 10-183 (192)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 1.6E-15 1.2E-19 144.8 5.3 188 348-560 88-316 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.5E-14 1.1E-18 120.5 9.2 126 54-184 14-145 (162)
29 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 8.7E-15 6.4E-19 139.6 7.3 250 244-535 25-315 (344)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 3.9E-14 2.9E-18 117.9 9.4 125 34-162 18-147 (162)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.5 8.8E-14 6.4E-18 109.9 10.6 101 37-142 1-102 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.1E-13 7.7E-18 109.4 10.3 102 454-560 2-104 (124)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 2.3E-11 1.7E-15 100.1 10.6 106 426-534 9-115 (156)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.2E-13 8.9E-18 119.2 -4.0 111 395-511 42-153 (198)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1E-13 7.4E-18 119.7 -5.2 127 34-167 23-153 (198)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 7.4E-11 5.4E-15 97.0 12.1 104 61-166 11-115 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.3 2.2E-08 1.6E-12 82.5 -2.5 81 104-184 63-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.1 8.3E-08 6E-12 79.0 -2.3 87 470-558 61-156 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 2.7E-06 1.9E-10 70.0 3.6 86 471-556 41-141 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 3.9E-06 2.8E-10 69.0 4.0 87 56-142 13-112 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.4 7.5E-06 5.5E-10 67.3 -0.9 111 54-164 13-142 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 7.9E-05 5.7E-09 60.9 2.5 18 300-317 42-59 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=1.2e-32 Score=262.22 Aligned_cols=281 Identities=26% Similarity=0.397 Sum_probs=236.3
Q ss_pred CcccCCCCCCCCCCCcCCCCCC--cccccccCCCC--CcEEEEEcCCCcccc--ccCccCcCCCCCCEEecCC-Cccccc
Q 046712 1 MKSQLQDPLGVTSSWNNSINLC--QWTGVTCGHRR--QRVTGLDLRHQSVGG--VLSPFVGNLNFLRSINLPN-NSFRGK 73 (566)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~l~l~~~~i~~--~~~~~~~~l~~L~~L~ls~-~~l~~~ 73 (566)
||+++.||. ++++|..+++|| .|.||.|.... .+|+.|+|+++.+.+ .+|..++++++|++|++++ |.+.+.
T Consensus 14 ~k~~~~~~~-~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~ 92 (313)
T d1ogqa_ 14 IKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGP 92 (313)
T ss_dssp HHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESC
T ss_pred HHHHCCCCC-cCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccc
Confidence 688888885 689999999999 49999998654 389999999999987 4788999999999999997 788888
Q ss_pred CCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEEecccccCCCCCCccccCC
Q 046712 74 IPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQILNIAENHLKGQLPASIGNL 153 (566)
Q Consensus 74 ~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l 153 (566)
+|.+|.++++|++|++++|++.+..+..+..+++|+++++++|.+...+|..+.+++.|+++++++|.+.+.+|..+..+
T Consensus 93 iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l 172 (313)
T d1ogqa_ 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCC
T ss_pred cccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccccccccccccccccc
Confidence 99999999999999999999998888889999999999999999888889999999999999999999988899999888
Q ss_pred CCC-CEEEccCCcCcccCCcccccCCcccEeecccccceecCC-cccCcccCceEecccccccccCCCCCCCCCCCCcEE
Q 046712 154 SAL-QEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIP-PIYNISSLQYIFIHTNRFHGSVPLDNGVNLPNLRYF 231 (566)
Q Consensus 154 ~~L-~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L 231 (566)
..+ +.+++++|.+++..|..+..+..+ .+++.++...+..+ ....++.++.+++.++.+.+.++. . ..+++|+.|
T Consensus 173 ~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~-~-~~~~~L~~L 249 (313)
T d1ogqa_ 173 SKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-V-GLSKNLNGL 249 (313)
T ss_dssp CTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-C-CCCTTCCEE
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc-c-ccccccccc
Confidence 876 889999999988888888777655 68888887777666 556778888888888887765543 2 257788888
Q ss_pred EcccccccccCcccccccCCCCeeecccccccccccccccCCCCCcEEECCCCcc
Q 046712 232 SISGNNLTGSLQDSLSNATNLQGLEINRNLFSGKVSINFSRLQNLSRLNLGENNL 286 (566)
Q Consensus 232 ~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 286 (566)
++++|++++..+..++++++|++|++++|.+++.+|. +..+++|+.+++.+|+.
T Consensus 250 ~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp ECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSE
T ss_pred cCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCcc
Confidence 8888888877777788888888888888888755553 45666777777777753
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.95 E-value=2.6e-27 Score=225.01 Aligned_cols=256 Identities=30% Similarity=0.473 Sum_probs=216.8
Q ss_pred CCCEEEccCCeeee--ecchhHhhhccCCcEEEccC-CCCCCCcchhhhccCCCCeecccCCcccccccccccCCCCCCE
Q 046712 305 KLEVLDLHSNRFGG--VLPFSLANLSTTMTEIAIGS-NQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIGELKSIQI 381 (566)
Q Consensus 305 ~L~~L~l~~~~~~~--~~~~~~~~~~~~L~~L~l~~-~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 381 (566)
+++.|+++++.+.+ .+|..+... +.|++|++++ |.+++.+|..+.++++|++|++++|++.+..+..+..+..|+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L-~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANL-PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGC-TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcC-ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 56677777776654 345555554 7778888875 5677778888999999999999999998888888888999999
Q ss_pred EEccCCcccccCCccccCCCCCCeEeccCccccccCCCCCcCCCCC-cEEEccCCcceeccchhhhhhcccceEEEccCC
Q 046712 382 LFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNL-ILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDN 460 (566)
Q Consensus 382 L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~ 460 (566)
+++++|.+...+|..+..++.++.+++++|.+.+.+|..+..+..+ +.+++++|++.+..+..+..... ..+++.++
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~--~~l~l~~~ 207 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL--AFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC--SEEECCSS
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 9999999888888899999999999999999988888888887776 88999999999888877665533 46899999
Q ss_pred cccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccccccCc
Q 046712 461 LLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLSGHIPQ 540 (566)
Q Consensus 461 ~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 540 (566)
...+..+..+..+++++.+++++|.+.+. +..+..+++|++|++++|++++.+|+++.++++|++|+|++|++++.+|+
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~l~~~-~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99888888889999999999999999854 44688899999999999999999999999999999999999999988886
Q ss_pred cccccccCceeecccCc-Cccc-CCCCC
Q 046712 541 YLENLSFLLFLNMSYNH-FEGK-VPIEC 566 (566)
Q Consensus 541 ~l~~l~~L~~L~l~~n~-~~~~-~p~~~ 566 (566)
+.++++|+.+++++|+ +.|. +| .|
T Consensus 287 -~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 287 -GGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp -STTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred -cccCCCCCHHHhCCCccccCCCCC-CC
Confidence 4789999999999998 5664 55 44
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=7.7e-25 Score=214.71 Aligned_cols=343 Identities=24% Similarity=0.329 Sum_probs=179.5
Q ss_pred cCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCE
Q 046712 55 GNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQI 134 (566)
Q Consensus 55 ~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~ 134 (566)
..+.+|++|+++++++++ + +.+..+++|++|++++|++++.. .++++++|++|++++|++.+.. .++++++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--cccccccccc
Confidence 345566666666666652 2 24556666666666666665432 2666666666666666665332 2566666666
Q ss_pred EecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceecCCcccCcccCceEeccccccc
Q 046712 135 LNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIPPIYNISSLQYIFIHTNRFH 214 (566)
Q Consensus 135 L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 214 (566)
|+++++.+.+. ........+.......+.+....+................. ....+.............+...
T Consensus 115 L~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 188 (384)
T d2omza2 115 LTLFNNQITDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT----DLKPLANLTTLERLDISSNKVS 188 (384)
T ss_dssp EECCSSCCCCC--GGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCC----CCGGGTTCTTCCEEECCSSCCC
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccc----hhhhhccccccccccccccccc
Confidence 66666665522 12334445555555554443211111111111111110000 0011122222222222222221
Q ss_pred ccCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCeeecccccccccccccccCCCCCcEEECCCCccCCcCCCCh
Q 046712 215 GSVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQGLEINRNLFSGKVSINFSRLQNLSRLNLGENNLGTGTTNDL 294 (566)
Q Consensus 215 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 294 (566)
. ......+++++.+.++++.+++..+ ...+++|+.+++++|.+... ..+..+++|+.+++.+|.+....+
T Consensus 189 ~---~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--- 258 (384)
T d2omza2 189 D---ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--- 258 (384)
T ss_dssp C---CGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---
T ss_pred c---ccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc---
Confidence 1 1111245666666666666554322 34556667777766666542 235566667777776666554322
Q ss_pred hhhhhccCCCCCCEEEccCCeeeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccCCCCeecccCCccccccccccc
Q 046712 295 DFITLLTNCTKLEVLDLHSNRFGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIG 374 (566)
Q Consensus 295 ~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~ 374 (566)
+..+++|+.|+++++++.+..+ +. ..+.++.+.+..|.+.+. ..+..++++++|++++|++++.. .+.
T Consensus 259 -----~~~~~~L~~L~l~~~~l~~~~~--~~-~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~ 326 (384)
T d2omza2 259 -----LSGLTKLTELKLGANQISNISP--LA-GLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVS 326 (384)
T ss_dssp -----GTTCTTCSEEECCSSCCCCCGG--GT-TCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGG
T ss_pred -----ccccccCCEeeccCcccCCCCc--cc-cccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccc
Confidence 4556667777776666654322 11 125566666666666532 23556666777777777666432 256
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCeEeccCccccccCCCCCcCCCCCcEEEccCC
Q 046712 375 ELKSIQILFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNLILLTTRKN 435 (566)
Q Consensus 375 ~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~ 435 (566)
.+++|++|++++|.+++ ++ .+.++++|++|++++|++++..| +.++++|++|++++|
T Consensus 327 ~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 327 SLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred cCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 66677777777776652 22 46666777777777776664332 566666777666655
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=1.9e-24 Score=211.88 Aligned_cols=340 Identities=26% Similarity=0.361 Sum_probs=248.6
Q ss_pred CcEEEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEc
Q 046712 34 QRVTGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEA 113 (566)
Q Consensus 34 ~~~~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l 113 (566)
..+++|++++++|+.. +.+..+++|++|++++|.+++ ++ .+.++++|++|++++|.+.+.. .++.+++|+.+++
T Consensus 44 ~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~ 117 (384)
T d2omza2 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTL 117 (384)
T ss_dssp TTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccccc--ccccccccccccc
Confidence 5789999999999864 468899999999999999984 44 4999999999999999987543 4889999999999
Q ss_pred CCCcCCCCcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceec
Q 046712 114 SNNKLEGEIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGM 193 (566)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~ 193 (566)
+++.+++..+ ......+.......+.+....... .....+........ .....+.............+... .
T Consensus 118 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~ 189 (384)
T d2omza2 118 FNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--GLTSLQQLSFGNQV---TDLKPLANLTTLERLDISSNKVS-D 189 (384)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGT--TCTTCSEEEEEESC---CCCGGGTTCTTCCEEECCSSCCC-C
T ss_pred cccccccccc--cccccccccccccccccccccccc--cccccccccccccc---chhhhhccccccccccccccccc-c
Confidence 9998875433 445567778877777665222221 11122222211111 11122333333333333333222 2
Q ss_pred CCcccCcccCceEecccccccccCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCeeecccccccccccccccCC
Q 046712 194 IPPIYNISSLQYIFIHTNRFHGSVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQGLEINRNLFSGKVSINFSRL 273 (566)
Q Consensus 194 ~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~ 273 (566)
......++.++.+.++++.+++..+.. .+++|++|++++|.+++. ..+..+++|+.+++.+|.+.+..+ +..+
T Consensus 190 ~~~~~~l~~~~~l~l~~n~i~~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~ 262 (384)
T d2omza2 190 ISVLAKLTNLESLIATNNQISDITPLG---ILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 262 (384)
T ss_dssp CGGGGGCTTCSEEECCSSCCCCCGGGG---GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred ccccccccccceeeccCCccCCCCccc---ccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--cccc
Confidence 234566778888888888776443322 467899999999988743 357788999999999998875443 7788
Q ss_pred CCCcEEECCCCccCCcCCCChhhhhhccCCCCCCEEEccCCeeeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccC
Q 046712 274 QNLSRLNLGENNLGTGTTNDLDFITLLTNCTKLEVLDLHSNRFGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLV 353 (566)
Q Consensus 274 ~~L~~L~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 353 (566)
++|++++++++.+.... .+..++.++.++++++.+.+... ....+.++.+++++|.+++.. .+..++
T Consensus 263 ~~L~~L~l~~~~l~~~~--------~~~~~~~l~~l~~~~n~l~~~~~---~~~~~~l~~L~ls~n~l~~l~--~l~~l~ 329 (384)
T d2omza2 263 TKLTELKLGANQISNIS--------PLAGLTALTNLELNENQLEDISP---ISNLKNLTYLTLYFNNISDIS--PVSSLT 329 (384)
T ss_dssp TTCSEEECCSSCCCCCG--------GGTTCTTCSEEECCSSCCSCCGG---GGGCTTCSEEECCSSCCSCCG--GGGGCT
T ss_pred ccCCEeeccCcccCCCC--------ccccccccccccccccccccccc---cchhcccCeEECCCCCCCCCc--ccccCC
Confidence 99999999998876543 36678899999999998875322 233489999999999998653 378899
Q ss_pred CCCeecccCCcccccccccccCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCc
Q 046712 354 NLNALGVESNQLAGTIPLAIGELKSIQILFLNENFLRGTIPSSLGNLTLLTQLILEVN 411 (566)
Q Consensus 354 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~ 411 (566)
+|++|++++|.+++. + .+.++++|++|++++|++++.. .+.++++|++|++++|
T Consensus 330 ~L~~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~--~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 330 KLQRLFFANNKVSDV-S-SLANLTNINWLSAGHNQISDLT--PLANLTRITQLGLNDQ 383 (384)
T ss_dssp TCCEEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCBCG--GGTTCTTCSEEECCCE
T ss_pred CCCEEECCCCCCCCC-h-hHcCCCCCCEEECCCCcCCCCh--hhccCCCCCEeeCCCC
Confidence 999999999999853 3 5889999999999999998543 3888999999999987
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=4.8e-23 Score=194.57 Aligned_cols=278 Identities=20% Similarity=0.199 Sum_probs=195.8
Q ss_pred CCCC-CcccccccCCCCCcEEEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCC
Q 046712 18 SINL-CQWTGVTCGHRRQRVTGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLG 96 (566)
Q Consensus 18 ~~~~-~~~~~~~~~~~~~~~~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~ 96 (566)
...| |.|+.++|... +++. +|..+. +++++|++++|.++...+.+|.++++|++|++++|.+..
T Consensus 5 p~~c~c~~~~~~C~~~------------~L~~-lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~ 69 (305)
T d1xkua_ 5 PFRCQCHLRVVQCSDL------------GLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69 (305)
T ss_dssp CTTCEEETTEEECTTS------------CCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEecCCEEEecCC------------CCCc-cCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccc
Confidence 3444 78888888642 3443 333342 678889999888885555578888889999998888887
Q ss_pred cCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCc--ccCCccc
Q 046712 97 KILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLG--GRIPSTI 174 (566)
Q Consensus 97 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~--~~~~~~l 174 (566)
..+..|.++++|++|++++|+++ .+|.. ....++.|+++++.+.+..+..+.....++.++...+... ...+..+
T Consensus 70 i~~~~f~~l~~L~~L~l~~n~l~-~l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 146 (305)
T d1xkua_ 70 ISPGAFAPLVKLERLYLSKNQLK-ELPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146 (305)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCS-BCCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG
T ss_pred cchhhhhCCCccCEecccCCccC-cCccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCcccc
Confidence 77788888888999999888887 44433 3457888888888887555555677778888888776543 2344567
Q ss_pred ccCCcccEeecccccceecCCcccCcccCceEecccccccccCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCe
Q 046712 175 SHVRNLISFNVAYNQFSGMIPPIYNISSLQYIFIHTNRFHGSVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQG 254 (566)
Q Consensus 175 ~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 254 (566)
..+++|+.+++++|.+...... .++++++|+++++......+... ..++.+++|++++|.+.+..+..+.++++|++
T Consensus 147 ~~l~~L~~l~l~~n~l~~l~~~--~~~~L~~L~l~~n~~~~~~~~~~-~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~ 223 (305)
T d1xkua_ 147 QGMKKLSYIRIADTNITTIPQG--LPPSLTELHLDGNKITKVDAASL-KGLNNLAKLGLSFNSISAVDNGSLANTPHLRE 223 (305)
T ss_dssp GGCTTCCEEECCSSCCCSCCSS--CCTTCSEEECTTSCCCEECTGGG-TTCTTCCEEECCSSCCCEECTTTGGGSTTCCE
T ss_pred ccccccCccccccCCccccCcc--cCCccCEEECCCCcCCCCChhHh-hcccccccccccccccccccccccccccccee
Confidence 7788888888888876654332 24677777777777664444333 36777888888888777766777777888888
Q ss_pred eecccccccccccccccCCCCCcEEECCCCccCCcCCCChhhhhhccCCCCCCEEEccCCeee
Q 046712 255 LEINRNLFSGKVSINFSRLQNLSRLNLGENNLGTGTTNDLDFITLLTNCTKLEVLDLHSNRFG 317 (566)
Q Consensus 255 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 317 (566)
|++++|.+... +.++..+++|++|++++|+++..+...+.........++|+.|++++|.+.
T Consensus 224 L~L~~N~L~~l-p~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 224 LHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp EECCSSCCSSC-CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred eeccccccccc-ccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 88888877644 446777788888888888777765544433344555667777777777654
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90 E-value=3.3e-22 Score=188.71 Aligned_cols=242 Identities=24% Similarity=0.299 Sum_probs=169.2
Q ss_pred CCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEEecc
Q 046712 59 FLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQILNIA 138 (566)
Q Consensus 59 ~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~ 138 (566)
..+.++-++.+++ .+|..+. +++++|++++|+++...+..|.++++|++|++++|.+....+..|..++.|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 6788899998888 6777664 689999999999987777789999999999999999997778889999999999999
Q ss_pred cccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceecCC---cccCcccCceEecccccccc
Q 046712 139 ENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIP---PIYNISSLQYIFIHTNRFHG 215 (566)
Q Consensus 139 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~---~l~~~~~L~~L~l~~~~~~~ 215 (566)
+|.+. .+|.. ....++.|++.+|.+....+..+.....+..+....+....... .+..+++|+.+++.++.+.
T Consensus 88 ~n~l~-~l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 88 KNQLK-ELPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp SSCCS-BCCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCccC-cCccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 99988 56654 34689999999999886555566677777777777664432211 4445666777777666654
Q ss_pred cCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCeeecccccccccccccccCCCCCcEEECCCCccCCcCCCChh
Q 046712 216 SVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQGLEINRNLFSGKVSINFSRLQNLSRLNLGENNLGTGTTNDLD 295 (566)
Q Consensus 216 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 295 (566)
.++.. .+++|++|++.+|......+..+..++.++.|++++|.+....+..+.++++|++|++++|.+...+.
T Consensus 164 ~l~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~---- 236 (305)
T d1xkua_ 164 TIPQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG---- 236 (305)
T ss_dssp SCCSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT----
T ss_pred ccCcc---cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccccccc----
Confidence 33322 24566666666666555555556666666666666666655555555555666666666665544321
Q ss_pred hhhhccCCCCCCEEEccCCeee
Q 046712 296 FITLLTNCTKLEVLDLHSNRFG 317 (566)
Q Consensus 296 ~~~~l~~~~~L~~L~l~~~~~~ 317 (566)
.+..+++|++|++++|+++
T Consensus 237 ---~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 237 ---GLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp ---TTTTCSSCCEEECCSSCCC
T ss_pred ---ccccccCCCEEECCCCccC
Confidence 2444555555555555554
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.2e-22 Score=187.63 Aligned_cols=206 Identities=22% Similarity=0.171 Sum_probs=104.0
Q ss_pred cCCcEEEccCCCCCCCcchhhhccCCCCeecccCCcccccccccccCCCCCCEEEcc-CCcccccCCccccCCCCCCeEe
Q 046712 329 TTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIGELKSIQILFLN-ENFLRGTIPSSLGNLTLLTQLI 407 (566)
Q Consensus 329 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~-~n~~~~~~~~~~~~~~~L~~L~ 407 (566)
+.+++|++++|.++...+..|.++++|++|++++|.+....+..+..+..++.+.+. .+.+....+..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 455666666666554444455555666666666665555555555555555555543 2333333344555555566666
Q ss_pred ccCccccccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCCCCCEEeCcccccc
Q 046712 408 LEVNNLQGKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFS 487 (566)
Q Consensus 408 l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~ 487 (566)
+++|.+....+..+..++.|+.+++++|.+.+..+..+..... ++.|++++|.+.+..+.+|..+++|+.+++++|++.
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~-L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~ 190 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN-LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccc-hhhcccccCcccccchhhhccccccchhhhhhcccc
Confidence 6555555444444555555555555555554332222222222 244555555554444444445555555555555554
Q ss_pred ccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccc
Q 046712 488 GEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLS 535 (566)
Q Consensus 488 ~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 535 (566)
+..|..|.++++|++|++++|.+....+++|..+++|++|++++|++.
T Consensus 191 ~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 444444555555555555555554444444445555555555555444
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=7e-22 Score=184.18 Aligned_cols=207 Identities=24% Similarity=0.258 Sum_probs=126.1
Q ss_pred CCCCEEEccCCeeeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccCCCCeeccc-CCcccccccccccCCCCCCEE
Q 046712 304 TKLEVLDLHSNRFGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLVNLNALGVE-SNQLAGTIPLAIGELKSIQIL 382 (566)
Q Consensus 304 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L 382 (566)
+.+++|++++|+++...+.++... +.|++|+++++.+....+..+..++.+.++.+. .+.+....+..+.++++|++|
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l-~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRAC-RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhcc-ccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEE
Confidence 456666666666664444444433 566666666666665555555556666666554 334444445556666666666
Q ss_pred EccCCcccccCCccccCCCCCCeEeccCccccccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCcc
Q 046712 383 FLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLL 462 (566)
Q Consensus 383 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~ 462 (566)
++++|.+....+..+..+++|+.+++++|.+.+..+..+..+++|+.|++++|++.+..+..+.....+ +.+++++|.+
T Consensus 111 ~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L-~~l~l~~N~l 189 (284)
T d1ozna_ 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL-DRLLLHQNRV 189 (284)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCC
T ss_pred ecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccccc-chhhhhhccc
Confidence 666666654445555556666666666666665555556666666666666666665444444444333 6666666666
Q ss_pred cccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCcccc
Q 046712 463 SGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTI 512 (566)
Q Consensus 463 ~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~ 512 (566)
.+..+..|..+++|++|++++|++.+..+..|..+++|++|++++|++..
T Consensus 190 ~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 66666666666666666666666665555566666666666666666553
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.7e-21 Score=175.84 Aligned_cols=199 Identities=21% Similarity=0.201 Sum_probs=150.7
Q ss_pred cCCcEEEccCCCCCCCcchhhhccCCCCeecccCCcccccccccccCCCCCCEEEccCCcccccCCccccCCCCCCeEec
Q 046712 329 TTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIGELKSIQILFLNENFLRGTIPSSLGNLTLLTQLIL 408 (566)
Q Consensus 329 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 408 (566)
..+.+++.+++.++. +|..+. +++++|+|++|.+++..+..|.++++|++|++++|.++. ++ .+..+++|++|++
T Consensus 10 ~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDL 84 (266)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEEC
T ss_pred CCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccc
Confidence 466778888888874 565442 579999999999987777788999999999999999873 33 4567899999999
Q ss_pred cCccccccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCCCCCEEeCccccccc
Q 046712 409 EVNNLQGKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSG 488 (566)
Q Consensus 409 ~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~ 488 (566)
++|++. ..+..+..+++|+.|+++++.+.+..+..+.....+ +.+++++|.+....+..+..+++|+.|++++|++++
T Consensus 85 s~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l-~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL-QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTC-CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred cccccc-ccccccccccccccccccccccceeecccccccccc-ccccccccccceeccccccccccchhcccccccccc
Confidence 999987 456677888899999998888775544444443333 777777777776666666777777777777777776
Q ss_pred cCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccc
Q 046712 489 EIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLS 535 (566)
Q Consensus 489 ~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 535 (566)
..+..|..+++|++|+|++|.++ .+|+++..+++|+.|+|++|+..
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 56666777777777777777777 66777777777777777777665
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.7e-20 Score=172.58 Aligned_cols=202 Identities=20% Similarity=0.200 Sum_probs=165.6
Q ss_pred cCCCCCCEEEccCCeeeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccCCCCeecccCCcccccccccccCCCCCC
Q 046712 301 TNCTKLEVLDLHSNRFGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIGELKSIQ 380 (566)
Q Consensus 301 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 380 (566)
.+...+..++.+++.++. +|..+ ++.+++|++++|.+++..+..|..+++|++|++++|+++... .+..+++|+
T Consensus 7 ~~~~~~~~v~C~~~~L~~-iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~~L~ 80 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLTA-LPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLPVLG 80 (266)
T ss_dssp ECSTTCCEEECTTSCCSS-CCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCTTCC
T ss_pred cccCCCeEEEccCCCCCe-eCcCc---CcCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--ccccccccc
Confidence 345667778888888874 45432 468999999999998766678889999999999999988443 356889999
Q ss_pred EEEccCCcccccCCccccCCCCCCeEeccCccccccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCC
Q 046712 381 ILFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDN 460 (566)
Q Consensus 381 ~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~ 460 (566)
+|++++|+++ ..+..+..+++|+.|+++++.+.+..+..+..+.+++.|++++|.+....+..+... +.++.+++++|
T Consensus 81 ~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l-~~l~~l~l~~N 158 (266)
T d1p9ag_ 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPT-PKLEKLSLANN 158 (266)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTC-TTCCEEECTTS
T ss_pred cccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceecccccccc-ccchhcccccc
Confidence 9999999987 456678889999999999999887777788889999999999999885544444444 44489999999
Q ss_pred cccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCccc
Q 046712 461 LLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFT 511 (566)
Q Consensus 461 ~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~ 511 (566)
++.+..+..|..+++|++|++++|+++ .+|..+..+++|+.|+|++|++.
T Consensus 159 ~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 999888888899999999999999998 78887888899999999998765
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78 E-value=2.5e-16 Score=151.37 Aligned_cols=135 Identities=25% Similarity=0.352 Sum_probs=69.7
Q ss_pred cEEEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccC-CCCcEEEc
Q 046712 35 RVTGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHC-SNLMKFEA 113 (566)
Q Consensus 35 ~~~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l-~~L~~L~l 113 (566)
++++|++++++++. +|+. .++|++|++++|+++ .+|..+ .+|+.|++++|.++.. ..+ +.|++|++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l-----~~lp~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKAL-----SDLPPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCC-----CSCCTTCCEEEC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchh-----hhhccccccccc
Confidence 45566777766663 3332 356666677666666 455432 3566666666655422 112 34666666
Q ss_pred CCCcCCCCcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccc
Q 046712 114 SNNKLEGEIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQF 190 (566)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~ 190 (566)
++|.+. .+| .++.+++|++|+++++.+. ..+. ....+..+.+.++... .+..+..++.++.+.+.++..
T Consensus 106 ~~n~l~-~lp-~~~~l~~L~~L~l~~~~~~-~~~~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 106 SNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPD---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp CSSCCS-SCC-CCTTCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCC
T ss_pred cccccc-ccc-chhhhccceeecccccccc-cccc---ccccccchhhcccccc--ccccccccccceecccccccc
Confidence 666665 333 2455666666666665554 1221 2334455555444432 223344455555555555443
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78 E-value=1.4e-16 Score=153.27 Aligned_cols=86 Identities=24% Similarity=0.293 Sum_probs=60.0
Q ss_pred eEEEccCCcccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCC
Q 046712 453 VLLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRN 532 (566)
Q Consensus 453 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n 532 (566)
...++..+.+.+. ...+++|++|++++|++. .+|.. +++|++|+|++|.++ .+|+. +++|++|++++|
T Consensus 267 ~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N 334 (353)
T d1jl5a_ 267 YYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYN 334 (353)
T ss_dssp CEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSS
T ss_pred cccccccCccccc----cccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCC
Confidence 3445555544422 234678999999999988 56643 578999999999988 56643 468999999999
Q ss_pred ccccccCccccccccCceeecc
Q 046712 533 NLSGHIPQYLENLSFLLFLNMS 554 (566)
Q Consensus 533 ~~~~~~~~~l~~l~~L~~L~l~ 554 (566)
+++ .+|+... +|+.|.+.
T Consensus 335 ~L~-~lp~~~~---~L~~L~~~ 352 (353)
T d1jl5a_ 335 PLR-EFPDIPE---SVEDLRMN 352 (353)
T ss_dssp CCS-SCCCCCT---TCCEEECC
T ss_pred cCC-CCCcccc---ccCeeECc
Confidence 987 5665433 46666553
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.1e-20 Score=189.45 Aligned_cols=385 Identities=17% Similarity=0.118 Sum_probs=198.9
Q ss_pred CCCEEecccccCCCC-CCccccCCCCCCEEEccCCcCcc----cCCcccccCCcccEeecccccceecCCcccCcccCce
Q 046712 131 MLQILNIAENHLKGQ-LPASIGNLSALQEIDVRGNRLGG----RIPSTISHVRNLISFNVAYNQFSGMIPPIYNISSLQY 205 (566)
Q Consensus 131 ~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~l~~~~i~~----~~~~~l~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~ 205 (566)
+|++||++.+++++. +...+..+++++.|++++|.++. .++.++..+++|+.|++++|.+.....
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~---------- 72 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGV---------- 72 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHH----------
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHH----------
Confidence 456666666666531 12233445566666666665542 222334455556666655554431100
Q ss_pred EecccccccccCCCCCCCCCCCCcEEEcccccccccC----cccccccCCCCeeecccccccccccccc-----cCCCCC
Q 046712 206 IFIHTNRFHGSVPLDNGVNLPNLRYFSISGNNLTGSL----QDSLSNATNLQGLEINRNLFSGKVSINF-----SRLQNL 276 (566)
Q Consensus 206 L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~----~~~l~~~~~L~~L~l~~~~~~~~~~~~~-----~~~~~L 276 (566)
..+.........+|++|++++|++++.. +..+..+++|++|++++|.+.......+ ......
T Consensus 73 ---------~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~ 143 (460)
T d1z7xw1 73 ---------HCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRL 143 (460)
T ss_dssp ---------HHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred ---------HHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhccccccccc
Confidence 0001111112346777777777766432 3345567778888887777654322221 111223
Q ss_pred cEEECCCCccCCcCCCChhhhhhccCCCCCCEEEccCCeeeeecch----hHhhhccCCcEEEccCCCCCCCc----chh
Q 046712 277 SRLNLGENNLGTGTTNDLDFITLLTNCTKLEVLDLHSNRFGGVLPF----SLANLSTTMTEIAIGSNQISDTI----PDV 348 (566)
Q Consensus 277 ~~L~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~----~~~~~~~~L~~L~l~~~~~~~~~----~~~ 348 (566)
.............. .......+...+.++.+.++++........ .+.........+.+..+.+.... ...
T Consensus 144 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (460)
T d1z7xw1 144 EKLQLEYCSLSAAS--CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 221 (460)
T ss_dssp CEEECTTSCCBGGG--HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred ccccccccccchhh--hcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhccccc
Confidence 33343333222111 111223455667788888887765532211 12222345667777777654321 123
Q ss_pred hhccCCCCeecccCCccccc-----ccccccCCCCCCEEEccCCccccc----CCccccCCCCCCeEeccCccccccCCC
Q 046712 349 IANLVNLNALGVESNQLAGT-----IPLAIGELKSIQILFLNENFLRGT----IPSSLGNLTLLTQLILEVNNLQGKIPP 419 (566)
Q Consensus 349 ~~~l~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~~~l~~~~~~ 419 (566)
+...+.++.+++.++.+... ..........++.+++++|.+... ....+...+.++.+++++|++......
T Consensus 222 l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~ 301 (460)
T d1z7xw1 222 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 301 (460)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred ccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45677888888888876422 223344567888888888877532 122344567788888888876532111
Q ss_pred C-----CcCCCCCcEEEccCCcceeccchhhhhh---cccceEEEccCCcccccCCc----Cc-cCCCCCCEEeCccccc
Q 046712 420 S-----NGNCQNLILLTTRKNKLSGIVPRQLLRI---ITLSVLLDLSDNLLSGHFPT----KV-GNLKNLVSLDISSNMF 486 (566)
Q Consensus 420 ~-----~~~~~~L~~L~l~~~~~~~~~~~~~~~~---~~~l~~L~l~~~~~~~~~~~----~~-~~~~~L~~L~ls~~~l 486 (566)
. ......|+.+++++|.+.......+... ...++.|++++|++.+.... .+ ...+.|++|++++|++
T Consensus 302 ~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i 381 (460)
T d1z7xw1 302 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 381 (460)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred hhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCC
Confidence 1 1133567777777777664433333322 12346666666665432211 12 1344566666666666
Q ss_pred ccc----CCccccCCCCCcEEeCCCCcccccCCcC----Cc-CCCCCCEEeCCCCcccc
Q 046712 487 SGE----IPTTLGGCTSLEYLGMQDNSFTISIPST----LS-SLKSITELDLSRNNLSG 536 (566)
Q Consensus 487 ~~~----~~~~~~~~~~L~~L~L~~n~~~~~~~~~----l~-~l~~L~~L~l~~n~~~~ 536 (566)
++. ++..+..+++|++|+|++|.+++..... +. +...|+.|++.++.+..
T Consensus 382 ~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 382 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred ChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 532 2233445566666666666665422211 21 22356666666666554
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.6e-21 Score=192.20 Aligned_cols=360 Identities=16% Similarity=0.158 Sum_probs=173.0
Q ss_pred CcEEEEEcCCCcccccc-CccCcCCCCCCEEecCCCccccc----CCcccCCCCCCCEEeCCCCcCCCcCcccc----c-
Q 046712 34 QRVTGLDLRHQSVGGVL-SPFVGNLNFLRSINLPNNSFRGK----IPHEVGNLFRLQNLTLTNNYFLGKILTDL----S- 103 (566)
Q Consensus 34 ~~~~~l~l~~~~i~~~~-~~~~~~l~~L~~L~ls~~~l~~~----~~~~~~~l~~L~~L~l~~~~l~~~~~~~~----~- 103 (566)
.+++.||++++++++.. .+.+..++++++|+|++|.+++. +..++..+++|++|++++|.++......+ .
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 46788888888887542 33456778888888888877643 34456677778888888777643222222 1
Q ss_pred cCCCCcEEEcCCCcCCCC----cchhccCCCCCCEEecccccCCCCCCccc-----cCCCCCCEEEccCCcCccc----C
Q 046712 104 HCSNLMKFEASNNKLEGE----IPVKISNLLMLQILNIAENHLKGQLPASI-----GNLSALQEIDVRGNRLGGR----I 170 (566)
Q Consensus 104 ~l~~L~~L~l~~~~~~~~----~~~~l~~l~~L~~L~l~~~~~~~~~~~~~-----~~l~~L~~L~l~~~~i~~~----~ 170 (566)
...+|++|++++|++++. ++..+..+++|++|++++|.+.......+ ................... .
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence 234677777777766532 23345556666666666665542111111 0111222222222221100 0
Q ss_pred CcccccCCcccEeecccccceecCCcccCcccCceEecccccccccCCCCCCCCCCCCcEEEccccccccc----Ccccc
Q 046712 171 PSTISHVRNLISFNVAYNQFSGMIPPIYNISSLQYIFIHTNRFHGSVPLDNGVNLPNLRYFSISGNNLTGS----LQDSL 246 (566)
Q Consensus 171 ~~~l~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~----~~~~l 246 (566)
...+.....++.+.++++....... . ...............+.+..+.+... ....+
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~------------------~-~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 222 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGV------------------R-VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 222 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHH------------------H-HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccc------------------c-ccccccccccccccccccccccccchhhhcccccc
Confidence 0011122333333333322211000 0 00000000112334455554433311 11233
Q ss_pred cccCCCCeeeccccccccc-----ccccccCCCCCcEEECCCCccCCcCCCChhhhhhccCCCCCCEEEccCCeeeeecc
Q 046712 247 SNATNLQGLEINRNLFSGK-----VSINFSRLQNLSRLNLGENNLGTGTTNDLDFITLLTNCTKLEVLDLHSNRFGGVLP 321 (566)
Q Consensus 247 ~~~~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 321 (566)
...+.++.+.+.++.+... ..........++.+++++|.+...... .....+...+.++.+++++|.+.+...
T Consensus 223 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~--~~~~~l~~~~~l~~l~l~~n~i~~~~~ 300 (460)
T d1z7xw1 223 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGA 300 (460)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred cccccccccchhhccccccccchhhcccccccccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 4456667777766654321 112234456677777777655432211 112334456677777777776654333
Q ss_pred hhHhh----hccCCcEEEccCCCCCCCcc----hhhhccCCCCeecccCCcccccc----ccccc-CCCCCCEEEccCCc
Q 046712 322 FSLAN----LSTTMTEIAIGSNQISDTIP----DVIANLVNLNALGVESNQLAGTI----PLAIG-ELKSIQILFLNENF 388 (566)
Q Consensus 322 ~~~~~----~~~~L~~L~l~~~~~~~~~~----~~~~~l~~L~~L~l~~~~~~~~~----~~~~~-~~~~L~~L~l~~n~ 388 (566)
..+.. ....++.+.+.++.++.... ..+..+++|++|++++|.+.+.. ...+. ..+.|++|++++|.
T Consensus 301 ~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~ 380 (460)
T d1z7xw1 301 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 380 (460)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred chhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCC
Confidence 22221 22356666666665553322 22334456666666666654321 12222 34456666666666
Q ss_pred cccc----CCccccCCCCCCeEeccCcccc
Q 046712 389 LRGT----IPSSLGNLTLLTQLILEVNNLQ 414 (566)
Q Consensus 389 ~~~~----~~~~~~~~~~L~~L~l~~~~l~ 414 (566)
+++. +...+..+++|++|++++|+++
T Consensus 381 i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 381 VSDSSCSSLAATLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CChHHHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 6532 2233444566666666666554
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.3e-17 Score=151.19 Aligned_cols=202 Identities=18% Similarity=0.081 Sum_probs=114.3
Q ss_pred CCCeecccCCcccccccccccCCCCCCEEEccCCcccccC-CccccCCCCCCeEeccC-ccccccCCCCCcCCCCCcEEE
Q 046712 354 NLNALGVESNQLAGTIPLAIGELKSIQILFLNENFLRGTI-PSSLGNLTLLTQLILEV-NNLQGKIPPSNGNCQNLILLT 431 (566)
Q Consensus 354 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~L~l~~-~~l~~~~~~~~~~~~~L~~L~ 431 (566)
++++|++++|.++...+.+|.++++|++|++++|.+...+ +..|..++.++++.+.. +.+....+..+..+++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 4555555555554333344555555555555555544322 23444555555555433 334434444455555555555
Q ss_pred ccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCC-CCCEEeCccccccccCCccccCCCCCcEE-eCCCCc
Q 046712 432 TRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLK-NLVSLDISSNMFSGEIPTTLGGCTSLEYL-GMQDNS 509 (566)
Q Consensus 432 l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~-~L~~L~ls~~~l~~~~~~~~~~~~~L~~L-~L~~n~ 509 (566)
++++.+....+.........+..+...++.+.......|..++ .++.|++++|+++...+..+ ..++++++ .+.+|.
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCTT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccc-cchhhhccccccccc
Confidence 5555544332222222223334444555555555555555543 67788888888874333333 34555555 456677
Q ss_pred ccccCCcCCcCCCCCCEEeCCCCccccccCccccccccCceeecccC
Q 046712 510 FTISIPSTLSSLKSITELDLSRNNLSGHIPQYLENLSFLLFLNMSYN 556 (566)
Q Consensus 510 ~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n 556 (566)
++...++.|.++++|++|++++|+++...+..|.+++.|+.+++.+.
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~l 235 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEESS
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCCC
Confidence 77544556788888888888888888665667888888888777654
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=2e-17 Score=147.97 Aligned_cols=190 Identities=25% Similarity=0.308 Sum_probs=128.0
Q ss_pred hhccCCCCeecccCCcccccccccccCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCccccccCCCCCcCCCCCc
Q 046712 349 IANLVNLNALGVESNQLAGTIPLAIGELKSIQILFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNLI 428 (566)
Q Consensus 349 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~ 428 (566)
+..+.+|++|++.+|.+++. ..+..+++|++|++++|.+++. ..+..+++|+.+++++|.++. + ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~--~~l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~ 110 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDL--APLKNLTKITELELSGNPLKN-V-SAIAGLQSIK 110 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCC--GGGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCC
T ss_pred HHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecc--ccccccccccccccccccccc-c-cccccccccc
Confidence 34556666666666666532 2456666666666666666532 235666666666666666542 2 2355666777
Q ss_pred EEEccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCC
Q 046712 429 LLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDN 508 (566)
Q Consensus 429 ~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n 508 (566)
.++++++...+.. .+... .....+.++++.+... ..+..+++|+.|++++|.+.+. ..+.++++|++|++++|
T Consensus 111 ~l~l~~~~~~~~~--~~~~~-~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n 183 (227)
T d1h6ua2 111 TLDLTSTQITDVT--PLAGL-SNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDN 183 (227)
T ss_dssp EEECTTSCCCCCG--GGTTC-TTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS
T ss_pred ccccccccccccc--hhccc-cchhhhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCC
Confidence 7777666654322 22222 2336677777766532 2356788999999999988633 33888999999999999
Q ss_pred cccccCCcCCcCCCCCCEEeCCCCccccccCccccccccCceeeccc
Q 046712 509 SFTISIPSTLSSLKSITELDLSRNNLSGHIPQYLENLSFLLFLNMSY 555 (566)
Q Consensus 509 ~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~ 555 (566)
.+++ + ..++.+++|++|++++|++++..| +.++++|+.|++++
T Consensus 184 ~l~~-l-~~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 184 KISD-I-SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226 (227)
T ss_dssp CCCC-C-GGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEE
T ss_pred ccCC-C-hhhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEeeC
Confidence 9884 3 348889999999999999885433 78899999999874
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=2.1e-16 Score=141.21 Aligned_cols=202 Identities=20% Similarity=0.290 Sum_probs=111.9
Q ss_pred EEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcC
Q 046712 39 LDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKL 118 (566)
Q Consensus 39 l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~ 118 (566)
+++..+.+++.. .++.+++|++|++++|.+++ ++ .+..+++|++|++++|.+++.. .+..+++|+++++++|.+
T Consensus 24 ~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~ 97 (227)
T d1h6ua2 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPL 97 (227)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeeccc--cccccccccccccccccc
Confidence 344445555433 34566677777777777663 32 4666777777777777665432 266667777777777666
Q ss_pred CCCcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceecCCccc
Q 046712 119 EGEIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIPPIY 198 (566)
Q Consensus 119 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~l~ 198 (566)
++ ++ .+.++++|++++++++...+ ...+...+.++.+.++++.+.. ...+...++|+.|++++|.+.... .+.
T Consensus 98 ~~-i~-~l~~l~~L~~l~l~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~L~~L~l~~n~~~~~~-~l~ 170 (227)
T d1h6ua2 98 KN-VS-AIAGLQSIKTLDLTSTQITD--VTPLAGLSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSDLT-PLA 170 (227)
T ss_dssp SC-CG-GGTTCTTCCEEECTTSCCCC--CGGGTTCTTCCEEECCSSCCCC--CGGGGGCTTCCEEECCSSCCCCCG-GGT
T ss_pred cc-cc-cccccccccccccccccccc--cchhccccchhhhhchhhhhch--hhhhccccccccccccccccccch-hhc
Confidence 53 22 45666777777776665542 2335556666666666665542 223455566666666655443211 233
Q ss_pred CcccCceEecccccccccCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCeeecccccccccccccccCCCCCcE
Q 046712 199 NISSLQYIFIHTNRFHGSVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQGLEINRNLFSGKVSINFSRLQNLSR 278 (566)
Q Consensus 199 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 278 (566)
.+++|++|++++|++++. ..++.+++|++|++++|++++..+ +..+++|+.
T Consensus 171 -------------------------~l~~L~~L~Ls~n~l~~l--~~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~ 221 (227)
T d1h6ua2 171 -------------------------NLSKLTTLKADDNKISDI--SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFI 221 (227)
T ss_dssp -------------------------TCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCE
T ss_pred -------------------------ccccceecccCCCccCCC--hhhcCCCCCCEEECcCCcCCCCcc--cccCCCCCE
Confidence 345555555555554432 124555556666665555544322 455555655
Q ss_pred EECC
Q 046712 279 LNLG 282 (566)
Q Consensus 279 L~l~ 282 (566)
|+++
T Consensus 222 L~ls 225 (227)
T d1h6ua2 222 VTLT 225 (227)
T ss_dssp EEEE
T ss_pred EEee
Confidence 5553
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=9e-17 Score=145.47 Aligned_cols=219 Identities=14% Similarity=0.116 Sum_probs=148.6
Q ss_pred CEEEccCCeeeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccCCCCeecccCCccccc-ccccccCCCCCCEEEcc
Q 046712 307 EVLDLHSNRFGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGT-IPLAIGELKSIQILFLN 385 (566)
Q Consensus 307 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~ 385 (566)
+.++.++..++ .+|..+ ++.+++|++++|.++...+..|.++++|++|++++|.+.+. .+.+|.+++.++++.+.
T Consensus 11 ~~i~c~~~~l~-~iP~~l---~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SEEEEESCSCS-SCCSCS---CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CEEEEeCCCCC-CcCCCC---CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 44555555444 333222 35677777777777654455677888888888888877643 34567788888888876
Q ss_pred C-CcccccCCccccCCCCCCeEeccCccccccCCC-CCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCccc
Q 046712 386 E-NFLRGTIPSSLGNLTLLTQLILEVNNLQGKIPP-SNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLS 463 (566)
Q Consensus 386 ~-n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~ 463 (566)
. +.+....+..|..+++|+.++++++.+....+. .+..+..++.+...++.+....+..+......++.++++++.+.
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred ccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 4 456556667788888888888888887643222 23345555555666666665556666666666688899999888
Q ss_pred ccCCcCccCCCCCCEE-eCccccccccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCC
Q 046712 464 GHFPTKVGNLKNLVSL-DISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLS 530 (566)
Q Consensus 464 ~~~~~~~~~~~~L~~L-~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~ 530 (566)
......+. .++++++ ++++|.++...+..|.++++|++|+|++|+++...+.+|.++++|+.+++.
T Consensus 167 ~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 167 EIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp EECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred cccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence 66665554 4555555 567778884445568999999999999999986555667777777766654
No 19
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.2e-17 Score=151.57 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=91.7
Q ss_pred CCCCeecccCCccccc-ccccccCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCcc-ccccC-CCCCcCCCCCcE
Q 046712 353 VNLNALGVESNQLAGT-IPLAIGELKSIQILFLNENFLRGTIPSSLGNLTLLTQLILEVNN-LQGKI-PPSNGNCQNLIL 429 (566)
Q Consensus 353 ~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~-l~~~~-~~~~~~~~~L~~ 429 (566)
.+|++|++++|.++.. ....+..+++|++|++++|.+++.....+..+++|++|++++|. ++... ......+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4455555555554322 22234455555555555555544444444455555555555542 22111 111224555555
Q ss_pred EEccCCc-ceec-cchhhhhhcccceEEEccCCc--ccccCCc-CccCCCCCCEEeCcccc-ccccCCccccCCCCCcEE
Q 046712 430 LTTRKNK-LSGI-VPRQLLRIITLSVLLDLSDNL--LSGHFPT-KVGNLKNLVSLDISSNM-FSGEIPTTLGGCTSLEYL 503 (566)
Q Consensus 430 L~l~~~~-~~~~-~~~~~~~~~~~l~~L~l~~~~--~~~~~~~-~~~~~~~L~~L~ls~~~-l~~~~~~~~~~~~~L~~L 503 (566)
|++++|. +++. ....+....+.++.|+++++. +.+.... ....+++|++|++++|. +++.....+..+++|++|
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence 5555543 2211 112233333444666666542 2221111 22456777777777653 555555566677777777
Q ss_pred eCCCC-cccccCCcCCcCCCCCCEEeCCCC
Q 046712 504 GMQDN-SFTISIPSTLSSLKSITELDLSRN 532 (566)
Q Consensus 504 ~L~~n-~~~~~~~~~l~~l~~L~~L~l~~n 532 (566)
++++| .+++.....++.+|+|+.|++++|
T Consensus 206 ~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 206 SLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 77775 455555555666777777777776
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=1.1e-15 Score=133.13 Aligned_cols=176 Identities=28% Similarity=0.390 Sum_probs=115.9
Q ss_pred EccCCCCCCCcchhhhccCCCCeecccCCcccccccccccCCCCCCEEEccCCcccccCCccccCCCCCCeEeccCcccc
Q 046712 335 AIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIPLAIGELKSIQILFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQ 414 (566)
Q Consensus 335 ~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~ 414 (566)
.+..+.+++... ...++++++|++++|.+... +.++.+++|++|++++|.+++.. .+.++++|++|++++|.+.
T Consensus 24 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 24 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCcc--cccCCcccccccccccccc
Confidence 344444443322 23567777777777777642 34667777777777777776332 3667777777777777665
Q ss_pred ccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCCCCCEEeCccccccccCCccc
Q 046712 415 GKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTL 494 (566)
Q Consensus 415 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~ 494 (566)
.. + .+..++.|+.|+++++.... ...+..+++|+.|++++|.+. .+ ..+
T Consensus 98 ~~-~-~l~~l~~L~~L~l~~~~~~~---------------------------~~~~~~l~~L~~L~l~~n~l~-~~-~~l 146 (199)
T d2omxa2 98 DI-T-PLANLTNLTGLTLFNNQITD---------------------------IDPLKNLTNLNRLELSSNTIS-DI-SAL 146 (199)
T ss_dssp CC-G-GGTTCTTCSEEECCSSCCCC---------------------------CGGGTTCTTCSEEECCSSCCC-CC-GGG
T ss_pred cc-c-cccccccccccccccccccc---------------------------ccccchhhhhHHhhhhhhhhc-cc-ccc
Confidence 22 2 25566666666665555431 123456788888888888876 33 347
Q ss_pred cCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccccccCccccccccCcee
Q 046712 495 GGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLSGHIPQYLENLSFLLFL 551 (566)
Q Consensus 495 ~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L 551 (566)
..+++|++|++.+|.+++. +.+.++++|++|++++|++++ ++ .+..+++|++|
T Consensus 147 ~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 147 SGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp TTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred cccccccccccccccccCC--ccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 7788888888888888742 357888888888888888874 33 46778888765
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=1.5e-15 Score=132.28 Aligned_cols=148 Identities=22% Similarity=0.371 Sum_probs=69.7
Q ss_pred CCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEE
Q 046712 56 NLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQIL 135 (566)
Q Consensus 56 ~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L 135 (566)
.++++++|++++|.++. + +.+..+++|++|++++|++++.. .+.++++|++|++++|.+.. ++ .+.+++.|+.|
T Consensus 38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCcc--cccCCccccccccccccccc-cc-ccccccccccc
Confidence 34455555555555442 2 12444555555555555544322 24455555555555554442 22 24455555555
Q ss_pred ecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceecCCcccCcccCceEeccccccc
Q 046712 136 NIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIPPIYNISSLQYIFIHTNRFH 214 (566)
Q Consensus 136 ~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 214 (566)
+++++.... ...+..+++|+.|++++|.+.. ...+..+++++.|++.+|.+.+. +.+..+++|++|++++|+++
T Consensus 112 ~l~~~~~~~--~~~~~~l~~L~~L~l~~n~l~~--~~~l~~~~~L~~L~l~~n~l~~l-~~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 112 TLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDL-KPLANLTTLERLDISSNKVS 185 (199)
T ss_dssp ECCSSCCCC--CGGGTTCTTCSEEECCSSCCCC--CGGGTTCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred ccccccccc--ccccchhhhhHHhhhhhhhhcc--cccccccccccccccccccccCC-ccccCCCCCCEEECCCCCCC
Confidence 555544431 2234445555555555555431 12344555555555555544432 23445555555555555544
No 22
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.65 E-value=3.1e-16 Score=135.87 Aligned_cols=123 Identities=18% Similarity=0.240 Sum_probs=86.3
Q ss_pred CCCccccccCccCcCCCCCCEEecCCCccccc-CCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCC
Q 046712 42 RHQSVGGVLSPFVGNLNFLRSINLPNNSFRGK-IPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEG 120 (566)
Q Consensus 42 ~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~-~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~ 120 (566)
++++++. +|..+. +++++|++++|.|+.. .+..|.++++|++|++++|.+....+..+..+++|++|++++|++..
T Consensus 16 s~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~ 92 (192)
T d1w8aa_ 16 TGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 92 (192)
T ss_dssp TTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCE
T ss_pred eCCCcCc-cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccc
Confidence 4445553 333332 5778888888887643 34556777788888888877777777777777778888888877776
Q ss_pred CcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCc
Q 046712 121 EIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLG 167 (566)
Q Consensus 121 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~ 167 (566)
..+..|.++++|++|+|++|.+.+..+.+|..+++|++|++++|.+.
T Consensus 93 l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 93 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp ECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 66666777777777777777777555666777777777777777664
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64 E-value=1.6e-15 Score=133.22 Aligned_cols=165 Identities=21% Similarity=0.312 Sum_probs=84.2
Q ss_pred CCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEE
Q 046712 56 NLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQIL 135 (566)
Q Consensus 56 ~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L 135 (566)
.+..|++|++++|.+++ ++ .+..+++|++|++++|++++.. .++.+++|++|++++|++++ ++ .+..+++|+.|
T Consensus 44 ~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-ccccccccccc
Confidence 34556666666665552 22 2555566666666666554322 24555666666666665552 22 35555566666
Q ss_pred ecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceecCCcccCcccCceEecccccccc
Q 046712 136 NIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGMIPPIYNISSLQYIFIHTNRFHG 215 (566)
Q Consensus 136 ~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 215 (566)
+++++.+. . ...+..+++++.+++++|.++. +..+..+++|+.+++++|.+.+. +.+.
T Consensus 118 ~l~~~~~~-~-~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~~l~----------------- 175 (210)
T d1h6ta2 118 SLEHNGIS-D-INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-VPLA----------------- 175 (210)
T ss_dssp ECTTSCCC-C-CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-GGGT-----------------
T ss_pred cccccccc-c-cccccccccccccccccccccc--ccccccccccccccccccccccc-cccc-----------------
Confidence 66555554 1 2335555555555555555532 23344455555555555544321 1222
Q ss_pred cCCCCCCCCCCCCcEEEcccccccccCcccccccCCCCeeecc
Q 046712 216 SVPLDNGVNLPNLRYFSISGNNLTGSLQDSLSNATNLQGLEIN 258 (566)
Q Consensus 216 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~ 258 (566)
.+++|++|++++|.+++. ..++++++|++|+++
T Consensus 176 --------~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 176 --------GLTKLQNLYLSKNHISDL--RALAGLKNLDVLELF 208 (210)
T ss_dssp --------TCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEE
T ss_pred --------CCCCCCEEECCCCCCCCC--hhhcCCCCCCEEEcc
Confidence 445555555555555432 235555566665554
No 24
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64 E-value=2.4e-15 Score=132.12 Aligned_cols=164 Identities=16% Similarity=0.256 Sum_probs=135.9
Q ss_pred CcEEEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEc
Q 046712 34 QRVTGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEA 113 (566)
Q Consensus 34 ~~~~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l 113 (566)
..+++|+++++.++... .+..+++|++|++++|.+++ ++ .+.++++|++|++++|+++.. ..+.++++|+.|++
T Consensus 46 ~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~l 119 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSL 119 (210)
T ss_dssp HTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEEC
T ss_pred cCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccccc--cccccccccccccc
Confidence 46889999999998653 48899999999999999984 33 478999999999999998753 35889999999999
Q ss_pred CCCcCCCCcchhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCcccCCcccccCCcccEeecccccceec
Q 046712 114 SNNKLEGEIPVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPSTISHVRNLISFNVAYNQFSGM 193 (566)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~ 193 (566)
++|.+.. + ..+..++.++.++++.+.+.+ +..+..+++|+++++++|.+.+ + ..++.+++|+.|++++|.+.+.
T Consensus 120 ~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i-~~l~~l~~L~~L~Ls~N~i~~l 193 (210)
T d1h6ta2 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-I-VPLAGLTKLQNLYLSKNHISDL 193 (210)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCBC
T ss_pred ccccccc-c-ccccccccccccccccccccc--cccccccccccccccccccccc-c-ccccCCCCCCEEECCCCCCCCC
Confidence 9998873 3 368889999999999999873 4467889999999999999974 3 3488999999999999988654
Q ss_pred CCcccCcccCceEeccc
Q 046712 194 IPPIYNISSLQYIFIHT 210 (566)
Q Consensus 194 ~~~l~~~~~L~~L~l~~ 210 (566)
+.+..+++|++|++++
T Consensus 194 -~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 194 -RALAGLKNLDVLELFS 209 (210)
T ss_dssp -GGGTTCTTCSEEEEEE
T ss_pred -hhhcCCCCCCEEEccC
Confidence 4566777777777653
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=3.2e-16 Score=144.76 Aligned_cols=61 Identities=20% Similarity=0.080 Sum_probs=26.9
Q ss_pred ccCCCCeecccCCc-ccccccccccCCCCCCEEEccCC-cccccCCccccCCCCCCeEeccCc
Q 046712 351 NLVNLNALGVESNQ-LAGTIPLAIGELKSIQILFLNEN-FLRGTIPSSLGNLTLLTQLILEVN 411 (566)
Q Consensus 351 ~l~~L~~L~l~~~~-~~~~~~~~~~~~~~L~~L~l~~n-~~~~~~~~~~~~~~~L~~L~l~~~ 411 (566)
++++|++|++++|. +++.....+..+++|++|++++| .+++.....+.++++|+.|++.++
T Consensus 173 ~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 173 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 34455555554432 33333334444455555555543 233333333444455555555444
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.61 E-value=1.8e-15 Score=130.95 Aligned_cols=173 Identities=19% Similarity=0.209 Sum_probs=120.7
Q ss_pred CCEEEccCCcccccCCccccCCCCCCeEeccCcccccc-CCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEc
Q 046712 379 IQILFLNENFLRGTIPSSLGNLTLLTQLILEVNNLQGK-IPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDL 457 (566)
Q Consensus 379 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l 457 (566)
.+.++.+++.++ .+|..+. +++++|++++|+++.. .+..|..+++|+.|++++|.+....+..+.....+ +.|++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L-~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI-QELQL 85 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-CEEEC
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccccc-ceeee
Confidence 457888888888 6676553 6889999999998753 45667888899999998888876666655555554 77788
Q ss_pred cCCcccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccccc
Q 046712 458 SDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLSGH 537 (566)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~ 537 (566)
++|++....+.+|.++++|++|+|++|.+....+..|..+++|++|+|++|.+.... +...-...++.+.+..+.+...
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~-~~~~~~~~l~~~~l~~~~~~c~ 164 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC-HLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG-GGHHHHHHHHHHCCSGGGCBBC
T ss_pred ccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccccccc-chHHHhhhhhhhcccCCCeEeC
Confidence 888777777777777788888888888777666667777778888888777765321 1111113355556666666655
Q ss_pred cCccccccccCceeecccCcCc
Q 046712 538 IPQYLENLSFLLFLNMSYNHFE 559 (566)
Q Consensus 538 ~~~~l~~l~~L~~L~l~~n~~~ 559 (566)
.|.. +..++.++++.+.++
T Consensus 165 ~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 165 APSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp SSTT---TTTSBGGGSCTTTCC
T ss_pred CChh---hcCCEeeecCHhhCc
Confidence 5544 445667778777665
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.53 E-value=1.6e-15 Score=144.76 Aligned_cols=188 Identities=18% Similarity=0.241 Sum_probs=104.5
Q ss_pred hhhccCCCCeecccCCccccc----ccccccCCCCCCEEEccCCcccccCCcc-------------ccCCCCCCeEeccC
Q 046712 348 VIANLVNLNALGVESNQLAGT----IPLAIGELKSIQILFLNENFLRGTIPSS-------------LGNLTLLTQLILEV 410 (566)
Q Consensus 348 ~~~~l~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~n~~~~~~~~~-------------~~~~~~L~~L~l~~ 410 (566)
.+..+++|++|++++|.+... +...+..+++|++|++++|.+....... ....+.|+.+++++
T Consensus 88 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~ 167 (344)
T d2ca6a1 88 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 167 (344)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccc
Confidence 345567788888888876543 2233445677888888877764211111 12234555555555
Q ss_pred ccccccC----CCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCccccc-----CCcCccCCCCCCEEeC
Q 046712 411 NNLQGKI----PPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGH-----FPTKVGNLKNLVSLDI 481 (566)
Q Consensus 411 ~~l~~~~----~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l 481 (566)
|.+.... ...+..++.+ +.+++++|.+... ....+..+++|+.|++
T Consensus 168 n~i~~~~~~~l~~~l~~~~~L-------------------------~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~L 222 (344)
T d2ca6a1 168 NRLENGSMKEWAKTFQSHRLL-------------------------HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDL 222 (344)
T ss_dssp SCCTGGGHHHHHHHHHHCTTC-------------------------CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEEC
T ss_pred ccccccccccccchhhhhhhh-------------------------cccccccccccccccccchhhhhcchhhhccccc
Confidence 5443211 1112233444 4555555544321 2234556677777777
Q ss_pred cccccccc----CCccccCCCCCcEEeCCCCcccccCC----cCCcC--CCCCCEEeCCCCccccc----cCcccc-ccc
Q 046712 482 SSNMFSGE----IPTTLGGCTSLEYLGMQDNSFTISIP----STLSS--LKSITELDLSRNNLSGH----IPQYLE-NLS 546 (566)
Q Consensus 482 s~~~l~~~----~~~~~~~~~~L~~L~L~~n~~~~~~~----~~l~~--l~~L~~L~l~~n~~~~~----~~~~l~-~l~ 546 (566)
++|.++.. +...+..+++|++|+|++|.+++... +++.. .+.|++|++++|.+... +.+.+. +.+
T Consensus 223 s~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~ 302 (344)
T d2ca6a1 223 QDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP 302 (344)
T ss_dssp CSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCC
Confidence 77776532 23445667777777777777665322 22222 35677788887777542 233332 456
Q ss_pred cCceeecccCcCcc
Q 046712 547 FLLFLNMSYNHFEG 560 (566)
Q Consensus 547 ~L~~L~l~~n~~~~ 560 (566)
.|+.|++++|.+..
T Consensus 303 ~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 303 DLLFLELNGNRFSE 316 (344)
T ss_dssp TCCEEECTTSBSCT
T ss_pred CCCEEECCCCcCCC
Confidence 77778888777654
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.5e-14 Score=120.47 Aligned_cols=126 Identities=16% Similarity=0.100 Sum_probs=64.9
Q ss_pred CcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCC
Q 046712 54 VGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQ 133 (566)
Q Consensus 54 ~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~ 133 (566)
+.+...+++|++++|+|+ .++..+..+++|++|++++|.+... ..|..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 344455555555555555 3344445555555555555555432 2355555555555555555533333334455555
Q ss_pred EEecccccCCCCCC--ccccCCCCCCEEEccCCcCcccCCc----ccccCCcccEee
Q 046712 134 ILNIAENHLKGQLP--ASIGNLSALQEIDVRGNRLGGRIPS----TISHVRNLISFN 184 (566)
Q Consensus 134 ~L~l~~~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~~~~----~l~~l~~L~~L~ 184 (566)
+|++++|.+.. ++ ..+..+++|++|++++|.++ ..+. .+..+++|+.|+
T Consensus 91 ~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccc-cccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 55555555542 22 23455566666666666554 2222 345556666554
No 29
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.50 E-value=8.7e-15 Score=139.60 Aligned_cols=250 Identities=17% Similarity=0.242 Sum_probs=119.4
Q ss_pred ccccccCCCCeeecccccccccc----cccccCCCCCcEEECCCCccCCcCCCC----hhhhhhccCCCCCCEEEccCCe
Q 046712 244 DSLSNATNLQGLEINRNLFSGKV----SINFSRLQNLSRLNLGENNLGTGTTND----LDFITLLTNCTKLEVLDLHSNR 315 (566)
Q Consensus 244 ~~l~~~~~L~~L~l~~~~~~~~~----~~~~~~~~~L~~L~l~~~~~~~~~~~~----~~~~~~l~~~~~L~~L~l~~~~ 315 (566)
..+.....++.|++++|.+.... ...+...++|+.++++++......... ..+...+..+++|+.|++++|.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~ 104 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 104 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence 34555566666666666554322 122345566666666655433221111 1122334555666666666665
Q ss_pred eeeecchhHhhhccCCcEEEccCCCCCCCcchhhhccCCCCeecccCCccccccc-------------ccccCCCCCCEE
Q 046712 316 FGGVLPFSLANLSTTMTEIAIGSNQISDTIPDVIANLVNLNALGVESNQLAGTIP-------------LAIGELKSIQIL 382 (566)
Q Consensus 316 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-------------~~~~~~~~L~~L 382 (566)
+.......+. ..+..+++|++|++++|.+..... ......+.|+.+
T Consensus 105 i~~~~~~~l~---------------------~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l 163 (344)
T d2ca6a1 105 FGPTAQEPLI---------------------DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 163 (344)
T ss_dssp CCTTTHHHHH---------------------HHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred cccccccchh---------------------hhhcccccchheecccccccccccccccccccccccccccccCccccee
Confidence 5433222211 122233444444444443321100 011234455666
Q ss_pred EccCCccccc----CCccccCCCCCCeEeccCcccccc-----CCCCCcCCCCCcEEEccCCcceeccchhhhhhcccce
Q 046712 383 FLNENFLRGT----IPSSLGNLTLLTQLILEVNNLQGK-----IPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSV 453 (566)
Q Consensus 383 ~l~~n~~~~~----~~~~~~~~~~L~~L~l~~~~l~~~-----~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~ 453 (566)
.+++|.+... +...+..++.|++|+++.|.+... +...+..+++|+.|++++|.+.......+.
T Consensus 164 ~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~------- 236 (344)
T d2ca6a1 164 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA------- 236 (344)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH-------
T ss_pred ecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc-------
Confidence 6666555421 122234455666666666655421 223455566666666666665422111111
Q ss_pred EEEccCCcccccCCcCccCCCCCCEEeCccccccccCCc----cccC--CCCCcEEeCCCCcccccC----CcCCc-CCC
Q 046712 454 LLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPT----TLGG--CTSLEYLGMQDNSFTISI----PSTLS-SLK 522 (566)
Q Consensus 454 ~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~----~~~~--~~~L~~L~L~~n~~~~~~----~~~l~-~l~ 522 (566)
..+..+++|++|++++|.+.+.... .+.. .+.|++|++++|.++... ...+. +++
T Consensus 237 --------------~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~ 302 (344)
T d2ca6a1 237 --------------IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP 302 (344)
T ss_dssp --------------HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCT
T ss_pred --------------ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCC
Confidence 2234456666677766666533222 2222 356777777777665421 22232 456
Q ss_pred CCCEEeCCCCccc
Q 046712 523 SITELDLSRNNLS 535 (566)
Q Consensus 523 ~L~~L~l~~n~~~ 535 (566)
+|++|++++|.+.
T Consensus 303 ~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 303 DLLFLELNGNRFS 315 (344)
T ss_dssp TCCEEECTTSBSC
T ss_pred CCCEEECCCCcCC
Confidence 7777777777765
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=3.9e-14 Score=117.91 Aligned_cols=125 Identities=21% Similarity=0.182 Sum_probs=105.5
Q ss_pred CcEEEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEc
Q 046712 34 QRVTGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEA 113 (566)
Q Consensus 34 ~~~~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l 113 (566)
.++++|+|++|+|+.. +..+..+++|++|++++|.++. ++ .+..+++|++|++++|.++...+..+..+++|++|++
T Consensus 18 ~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 5789999999999976 5567889999999999999984 43 5899999999999999998777666788999999999
Q ss_pred CCCcCCCCc-chhccCCCCCCEEecccccCCCCCCc----cccCCCCCCEEEcc
Q 046712 114 SNNKLEGEI-PVKISNLLMLQILNIAENHLKGQLPA----SIGNLSALQEIDVR 162 (566)
Q Consensus 114 ~~~~~~~~~-~~~l~~l~~L~~L~l~~~~~~~~~~~----~~~~l~~L~~L~l~ 162 (566)
++|++.+.. ...+..+++|++|++++|.+. ..+. .+..+++|++||-.
T Consensus 95 ~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 95 TNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTE
T ss_pred ccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeCCC
Confidence 999998432 246789999999999999987 4443 57889999999743
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.48 E-value=8.8e-14 Score=109.89 Aligned_cols=101 Identities=21% Similarity=0.307 Sum_probs=54.1
Q ss_pred EEEEcCCCccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEEEcCCC
Q 046712 37 TGLDLRHQSVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKFEASNN 116 (566)
Q Consensus 37 ~~l~l~~~~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~ 116 (566)
|+|++++|+++.. + .+..+++|++|++++|.++ .+|.++..+++|++|++++|.++.. ..++.+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc--CccccccccCeEECCCC
Confidence 3566666666533 2 3566666666666666665 4455556666666666666655432 23555555555555555
Q ss_pred cCCCCc-chhccCCCCCCEEecccccC
Q 046712 117 KLEGEI-PVKISNLLMLQILNIAENHL 142 (566)
Q Consensus 117 ~~~~~~-~~~l~~l~~L~~L~l~~~~~ 142 (566)
++.+.. ...+..+++|++|++++|.+
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcC
Confidence 554221 12344445555555555444
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.47 E-value=1.1e-13 Score=109.43 Aligned_cols=102 Identities=26% Similarity=0.317 Sum_probs=63.0
Q ss_pred EEEccCCcccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCc
Q 046712 454 LLDLSDNLLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNN 533 (566)
Q Consensus 454 ~L~l~~~~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 533 (566)
.|++++|+++.. + .+..+++|++|++++|.+. .+|..+..+++|++|++++|.++. + +++..+++|++|++++|+
T Consensus 2 ~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V-DGVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C-GGGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-c-CccccccccCeEECCCCc
Confidence 456666666532 2 3566666777777777666 455556666677777777776663 3 346666677777777776
Q ss_pred ccccc-CccccccccCceeecccCcCcc
Q 046712 534 LSGHI-PQYLENLSFLLFLNMSYNHFEG 560 (566)
Q Consensus 534 ~~~~~-~~~l~~l~~L~~L~l~~n~~~~ 560 (566)
+.... ...+..+++|+.|++++|++++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 66432 2456666667777777766654
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.3e-11 Score=100.14 Aligned_cols=106 Identities=20% Similarity=0.065 Sum_probs=47.6
Q ss_pred CCcEEEccCCcceeccchhhhhhcccceEEEccCC-cccccCCcCccCCCCCCEEeCccccccccCCccccCCCCCcEEe
Q 046712 426 NLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDN-LLSGHFPTKVGNLKNLVSLDISSNMFSGEIPTTLGGCTSLEYLG 504 (566)
Q Consensus 426 ~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~-~~~~~~~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~~~~L~~L~ 504 (566)
....++..++.+. ..|..+.....+ +.|+++++ .+....+.+|..+++|+.|++++|++....+..|..+++|++|+
T Consensus 9 ~~~~l~c~~~~~~-~~p~~l~~l~~l-~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 9 GSSGLRCTRDGAL-DSLHHLPGAENL-TELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSCEECCSSCCC-TTTTTSCSCSCC-SEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCeEEecCCCCc-cCcccccCcccc-CeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 3344555544443 223333333332 44455433 24444444455555555555555555543344455555555555
Q ss_pred CCCCcccccCCcCCcCCCCCCEEeCCCCcc
Q 046712 505 MQDNSFTISIPSTLSSLKSITELDLSRNNL 534 (566)
Q Consensus 505 L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~ 534 (566)
|++|+++...+..+. ..+|+.|+|++|++
T Consensus 87 Ls~N~l~~l~~~~~~-~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 87 LSFNALESLSWKTVQ-GLSLQELVLSGNPL 115 (156)
T ss_dssp CCSSCCSCCCSTTTC-SCCCCEEECCSSCC
T ss_pred ccCCCCcccChhhhc-cccccccccCCCcc
Confidence 555555522222222 23455555555544
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.22 E-value=1.2e-13 Score=119.22 Aligned_cols=111 Identities=24% Similarity=0.248 Sum_probs=51.0
Q ss_pred ccccCCCCCCeEeccCccccccCCCCCcCCCCCcEEEccCCcceeccchhhhhhcccceEEEccCCcccccCCcCccCCC
Q 046712 395 SSLGNLTLLTQLILEVNNLQGKIPPSNGNCQNLILLTTRKNKLSGIVPRQLLRIITLSVLLDLSDNLLSGHFPTKVGNLK 474 (566)
Q Consensus 395 ~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~ 474 (566)
..+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+.. ++. +....+.++.|++++|.+... ..+..++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~~-i~~-~~~~~~~L~~L~l~~N~i~~l--~~~~~l~ 115 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IEN-LDAVADTLEELWISYNQIASL--SGIEKLV 115 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEECS-CSS-HHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred hHHhcccccceeECcccCCCC-cc-cccCCccccChhhccccccc-ccc-ccccccccccccccccccccc--ccccccc
Confidence 344445555555555555542 22 34455555555555555442 111 111222224444444444322 1234455
Q ss_pred CCCEEeCccccccccCC-ccccCCCCCcEEeCCCCccc
Q 046712 475 NLVSLDISSNMFSGEIP-TTLGGCTSLEYLGMQDNSFT 511 (566)
Q Consensus 475 ~L~~L~ls~~~l~~~~~-~~~~~~~~L~~L~L~~n~~~ 511 (566)
+|+.|++++|.+.+... ..+..+++|++|++++|++.
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccccccccchhccccccccccCCCccceeecCCCccc
Confidence 56666666665542111 23455555555555555544
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=1e-13 Score=119.73 Aligned_cols=127 Identities=18% Similarity=0.273 Sum_probs=88.3
Q ss_pred CcEEEEEcCCC--ccccccCccCcCCCCCCEEecCCCcccccCCcccCCCCCCCEEeCCCCcCCCcCccccccCCCCcEE
Q 046712 34 QRVTGLDLRHQ--SVGGVLSPFVGNLNFLRSINLPNNSFRGKIPHEVGNLFRLQNLTLTNNYFLGKILTDLSHCSNLMKF 111 (566)
Q Consensus 34 ~~~~~l~l~~~--~i~~~~~~~~~~l~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L 111 (566)
...+.+++.+. .+. .++..+..+++|++|++++|.++ .++ .+.++++|++|++++|.++.. +..+..+++|++|
T Consensus 23 ~~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L 98 (198)
T d1m9la_ 23 TEAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKKI-ENLDAVADTLEEL 98 (198)
T ss_dssp TTCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEE
T ss_pred cccceeeeecccCchh-hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccccc-ccccccccccccc
Confidence 33455565553 122 23456788888888888888887 343 477888888888888887643 3334456678888
Q ss_pred EcCCCcCCCCcchhccCCCCCCEEecccccCCCCCC--ccccCCCCCCEEEccCCcCc
Q 046712 112 EASNNKLEGEIPVKISNLLMLQILNIAENHLKGQLP--ASIGNLSALQEIDVRGNRLG 167 (566)
Q Consensus 112 ~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~--~~~~~l~~L~~L~l~~~~i~ 167 (566)
++++|.++. + ..+..+++|++|++++|.+.+ ++ ..+..+++|++|++++|.+.
T Consensus 99 ~l~~N~i~~-l-~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 99 WISYNQIAS-L-SGIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp ECSEEECCC-H-HHHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccccccc-c-ccccccccccccccccchhcc-ccccccccCCCccceeecCCCccc
Confidence 888888873 3 346777888888888888763 33 35677888888888888765
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=7.4e-11 Score=97.00 Aligned_cols=104 Identities=21% Similarity=0.157 Sum_probs=52.8
Q ss_pred CEEecCCCcccccCCcccCCCCCCCEEeCCCC-cCCCcCccccccCCCCcEEEcCCCcCCCCcchhccCCCCCCEEeccc
Q 046712 61 RSINLPNNSFRGKIPHEVGNLFRLQNLTLTNN-YFLGKILTDLSHCSNLMKFEASNNKLEGEIPVKISNLLMLQILNIAE 139 (566)
Q Consensus 61 ~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~~-~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~ 139 (566)
+.++.+++.+. ..|..+..+++|++|++.++ .++...+.+|.++++|+.|++++|+++.+.+.+|..+++|++|++++
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 33444444443 33444555555555555433 24444444555555555555555555544444555555555555555
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCcC
Q 046712 140 NHLKGQLPASIGNLSALQEIDVRGNRL 166 (566)
Q Consensus 140 ~~~~~~~~~~~~~l~~L~~L~l~~~~i 166 (566)
|++. .++.......+|++|++++|.+
T Consensus 90 N~l~-~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 90 NALE-SLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCC
T ss_pred CCCc-ccChhhhccccccccccCCCcc
Confidence 5555 3333333333566666666655
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25 E-value=2.2e-08 Score=82.49 Aligned_cols=81 Identities=22% Similarity=0.256 Sum_probs=36.1
Q ss_pred cCCCCcEEEcCCCcCCCCc--chhccCCCCCCEEecccccCCCCCCccccCCCCCCEEEccCCcCcccCCc-------cc
Q 046712 104 HCSNLMKFEASNNKLEGEI--PVKISNLLMLQILNIAENHLKGQLPASIGNLSALQEIDVRGNRLGGRIPS-------TI 174 (566)
Q Consensus 104 ~l~~L~~L~l~~~~~~~~~--~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~-------~l 174 (566)
++++|++|++++|+++... +..+..+++|+.|++++|.+...-+.......+|++|++++|.+...... .+
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~ 142 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR 142 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHH
Confidence 3455555555555554321 22233455555555555555421111222333455555555555432221 13
Q ss_pred ccCCcccEee
Q 046712 175 SHVRNLISFN 184 (566)
Q Consensus 175 ~~l~~L~~L~ 184 (566)
..+|+|+.|+
T Consensus 143 ~~~P~L~~LD 152 (162)
T d1koha1 143 ERFPKLLRLD 152 (162)
T ss_dssp TTSTTCCEET
T ss_pred HHCCCCCEEC
Confidence 4456666553
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09 E-value=8.3e-08 Score=78.95 Aligned_cols=87 Identities=22% Similarity=0.203 Sum_probs=61.4
Q ss_pred ccCCCCCCEEeCccccccccC--CccccCCCCCcEEeCCCCcccccCCcCCcCCCCCCEEeCCCCccccccC-------c
Q 046712 470 VGNLKNLVSLDISSNMFSGEI--PTTLGGCTSLEYLGMQDNSFTISIPSTLSSLKSITELDLSRNNLSGHIP-------Q 540 (566)
Q Consensus 470 ~~~~~~L~~L~ls~~~l~~~~--~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~-------~ 540 (566)
+..+++|++|++++|++++.. +..+..+++|+.|++++|.+.....-.+.....|+.|++++|++..... .
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 356788999999999887432 3446678899999999998885332233345678999999998875443 2
Q ss_pred cccccccCceeecccCcC
Q 046712 541 YLENLSFLLFLNMSYNHF 558 (566)
Q Consensus 541 ~l~~l~~L~~L~l~~n~~ 558 (566)
.+..+|+|+.|| |..+
T Consensus 141 i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 141 IRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHTTSTTCCEET--TEEC
T ss_pred HHHHCCCCCEEC--cCCC
Confidence 356778888776 4444
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.91 E-value=2.7e-06 Score=70.03 Aligned_cols=86 Identities=19% Similarity=0.196 Sum_probs=43.6
Q ss_pred cCCCCCCEEeCccccccccC----CccccCCCCCcEEeCCCCccccc----CCcCCcCCCCCCEEeCCCCcccc------
Q 046712 471 GNLKNLVSLDISSNMFSGEI----PTTLGGCTSLEYLGMQDNSFTIS----IPSTLSSLKSITELDLSRNNLSG------ 536 (566)
Q Consensus 471 ~~~~~L~~L~ls~~~l~~~~----~~~~~~~~~L~~L~L~~n~~~~~----~~~~l~~l~~L~~L~l~~n~~~~------ 536 (566)
...++|++|+|++|.+.+.. ...+...+.|++|+|++|.++.. +.+++...++|++|++++|.+..
T Consensus 41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~ 120 (167)
T d1pgva_ 41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 120 (167)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHH
Confidence 34455666666666554221 12333445666666666655542 22344555666666666554331
Q ss_pred -ccCccccccccCceeecccC
Q 046712 537 -HIPQYLENLSFLLFLNMSYN 556 (566)
Q Consensus 537 -~~~~~l~~l~~L~~L~l~~n 556 (566)
.+.+.+...++|+.|+++.+
T Consensus 121 ~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 121 MDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHhCCCccEeeCcCC
Confidence 13344445566666666554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.87 E-value=3.9e-06 Score=69.00 Aligned_cols=87 Identities=11% Similarity=0.083 Sum_probs=48.6
Q ss_pred CCCCCCEEecCCC-ccccc----CCcccCCCCCCCEEeCCCCcCCCcCcc----ccccCCCCcEEEcCCCcCCCC----c
Q 046712 56 NLNFLRSINLPNN-SFRGK----IPHEVGNLFRLQNLTLTNNYFLGKILT----DLSHCSNLMKFEASNNKLEGE----I 122 (566)
Q Consensus 56 ~l~~L~~L~ls~~-~l~~~----~~~~~~~l~~L~~L~l~~~~l~~~~~~----~~~~l~~L~~L~l~~~~~~~~----~ 122 (566)
+.++|++|+++++ .++.. +..++...++|++|++++|.+...... .+...+.|++|++++|.+.+. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4567777777653 34432 233455666677777777766433222 234456677777777766532 2
Q ss_pred chhccCCCCCCEEecccccC
Q 046712 123 PVKISNLLMLQILNIAENHL 142 (566)
Q Consensus 123 ~~~l~~l~~L~~L~l~~~~~ 142 (566)
..++...+.|++|+++++.+
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSS
T ss_pred HHHHHhCCcCCEEECCCCcC
Confidence 22345556666666665543
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.40 E-value=7.5e-06 Score=67.27 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=59.1
Q ss_pred CcCCCCCCEEecCC-Cccccc----CCcccCCCCCCCEEeCCCCcCCCcCcc----ccccCCCCcEEEcCCCcCCCC---
Q 046712 54 VGNLNFLRSINLPN-NSFRGK----IPHEVGNLFRLQNLTLTNNYFLGKILT----DLSHCSNLMKFEASNNKLEGE--- 121 (566)
Q Consensus 54 ~~~l~~L~~L~ls~-~~l~~~----~~~~~~~l~~L~~L~l~~~~l~~~~~~----~~~~l~~L~~L~l~~~~~~~~--- 121 (566)
..+.+.|++|++++ +.++.. +..++...++|++|++++|.+...... .+...+.++.++++++.+.+.
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34567777777776 345432 334455667777777777766543222 234566777777777665432
Q ss_pred -cchhccCCCCCCEEecc--cccCCC----CCCccccCCCCCCEEEccCC
Q 046712 122 -IPVKISNLLMLQILNIA--ENHLKG----QLPASIGNLSALQEIDVRGN 164 (566)
Q Consensus 122 -~~~~l~~l~~L~~L~l~--~~~~~~----~~~~~~~~l~~L~~L~l~~~ 164 (566)
+...+...+.|+.++++ .+.+.. .+...+...++|++|++..+
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 22334455666654443 333332 12333344555555555443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.13 E-value=7.9e-05 Score=60.88 Aligned_cols=18 Identities=17% Similarity=0.206 Sum_probs=9.0
Q ss_pred ccCCCCCCEEEccCCeee
Q 046712 300 LTNCTKLEVLDLHSNRFG 317 (566)
Q Consensus 300 l~~~~~L~~L~l~~~~~~ 317 (566)
+...+.|++|++++|.+.
T Consensus 42 l~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp HTTCCSCCEEECTTSCCC
T ss_pred HhcCCccCeeeccCCccc
Confidence 344455555555555443
Done!