BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046713
(216 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/203 (76%), Positives = 172/203 (84%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF+ PELK+ L+ NSHYAAVRSTANGAPFRAITVRDTIGDLP VGNGAS T ME
Sbjct: 1316 MHVFSAPELKISLSGNSHYAAVRSTANGAPFRAITVRDTIGDLPVVGNGASATNME---- 1371
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
YK++PV WFQK+IRG+M+ L DHISK M+ELNLIRCQKIPK+PG+DWR LP EKV
Sbjct: 1372 --YKNDPVSWFQKRIRGNMVTLTDHISKEMNELNLIRCQKIPKRPGADWRDLPDEKVKLS 1429
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1430 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1489
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSYKF G+IQH
Sbjct: 1490 TVRECARSQGFRDSYKFAGNIQH 1512
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 156/203 (76%), Positives = 174/203 (85%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF GPELK+KL+ NS YAAVRSTANGAPFRAITVRDTIGDLPAVGNGAS+TTM+
Sbjct: 1334 MHVFAGPELKIKLSGNSQYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASLTTMQ---- 1389
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
YK+EPV WFQK IRGD LVL DHISK M+ELNLIRC++IPK PG+DWR LP +KV
Sbjct: 1390 --YKNEPVSWFQKTIRGDALVLTDHISKEMNELNLIRCKRIPKHPGADWRDLPDKKVKLS 1447
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDL+PWCLPNTA++HNQWKGLFGRLDWEGNFPTSVTDP PMG VG CFHP QDRI+
Sbjct: 1448 NGQLVDLVPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIL 1507
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF+DSY+F+G+IQ
Sbjct: 1508 TVRECARSQGFADSYQFLGNIQQ 1530
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 169/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ N+ YAAV STA GAPFR ITVRDTIGDLPAVGNGASV TME
Sbjct: 1292 MHVFGSPELKISLSDNTRYAAVPSTAGGAPFRPITVRDTIGDLPAVGNGASVITME---- 1347
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YKSEP WFQKKIRGD+LVLNDHISK M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 1348 --YKSEPASWFQKKIRGDVLVLNDHISKEMNELNLIRCQRIPKRPGADWRDLPDEKVRLS 1405
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGLFGRL+WEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1406 NGQMHDLIPWCLPNTAKRHNQWKGLFGRLEWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1465
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSYKF G+IQH
Sbjct: 1466 TVRECARSQGFPDSYKFAGNIQH 1488
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 169/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ N+ YAAV STA GAPFR ITVRDTIGDLPAVGNGASV TME
Sbjct: 313 MHVFGSPELKISLSDNTRYAAVPSTAGGAPFRPITVRDTIGDLPAVGNGASVITME---- 368
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YKSEP WFQKKIRGD+LVLNDHISK M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 369 --YKSEPASWFQKKIRGDVLVLNDHISKEMNELNLIRCQRIPKRPGADWRDLPDEKVRLS 426
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGLFGRL+WEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 427 NGQMHDLIPWCLPNTAKRHNQWKGLFGRLEWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 486
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSYKF G+IQH
Sbjct: 487 TVRECARSQGFPDSYKFAGNIQH 509
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 170/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L++N YAAVRSTA GAPFRAITVRDTIGDLPAV NGAS T +E
Sbjct: 1307 MHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLE---- 1362
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y++ PV WFQKKIRG+M+VL DHISK M+ELNLIRCQKIPKQPG+DWR LP EKV
Sbjct: 1363 --YQNGPVSWFQKKIRGNMMVLTDHISKEMNELNLIRCQKIPKQPGADWRSLPDEKVALS 1420
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDR++
Sbjct: 1421 TGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRLV 1480
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECARSQGF DSYKF G+IQH
Sbjct: 1481 SVRECARSQGFPDSYKFSGNIQH 1503
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 170/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L++N YAAVRSTA GAPFRAITVRDTIGDLPAV NGAS T +E
Sbjct: 1194 MHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLE---- 1249
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y++ PV WFQKKIRG+M+VL DHISK M+ELNLIRCQKIPKQPG+DWR LP EKV
Sbjct: 1250 --YQNGPVSWFQKKIRGNMMVLTDHISKEMNELNLIRCQKIPKQPGADWRSLPDEKVALS 1307
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDR++
Sbjct: 1308 TGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRLV 1367
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECARSQGF DSYKF G+IQH
Sbjct: 1368 SVRECARSQGFPDSYKFSGNIQH 1390
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 168/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ N YAAVRSTA GAPFRAITVRDTIGDLP V NGAS+T +E
Sbjct: 1201 MHVFAVPELKITLSENMQYAAVRSTATGAPFRAITVRDTIGDLPDVKNGASITNLE---- 1256
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+++PV WFQKKIRG+M+VL DHISK M+ELNLIRCQKIPKQPG+DW LP EKV
Sbjct: 1257 --YQNDPVSWFQKKIRGNMVVLMDHISKEMNELNLIRCQKIPKQPGADWHSLPDEKVKLS 1314
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1315 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1374
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECARSQGF DSY+F G+IQH
Sbjct: 1375 SVRECARSQGFRDSYQFAGNIQH 1397
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 168/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ N YAAVRSTA GAPFRAITVRDTIGDLP V NGAS+T +E
Sbjct: 1321 MHVFAVPELKITLSENMQYAAVRSTATGAPFRAITVRDTIGDLPDVKNGASITNLE---- 1376
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+++PV WFQKKIRG+M+VL DHISK M+ELNLIRCQKIPKQPG+DW LP EKV
Sbjct: 1377 --YQNDPVSWFQKKIRGNMVVLMDHISKEMNELNLIRCQKIPKQPGADWHSLPDEKVKLS 1434
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1435 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1494
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECARSQGF DSY+F G+IQH
Sbjct: 1495 SVRECARSQGFRDSYQFAGNIQH 1517
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF+ PELK+ L+ N YAAVRSTANGAP RAITVRDTIG+LP VGNGAS T ME
Sbjct: 1346 MHVFSAPELKITLSENVQYAAVRSTANGAPLRAITVRDTIGELPVVGNGASRTNME---- 1401
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+PV WFQKKIRG+M VL DHISK M+ELNLIRCQKIPK+PG DWR LP EK+
Sbjct: 1402 --YQSDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGCDWRDLPEEKIKLS 1459
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1460 SGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRIL 1519
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D Y+F G+I H
Sbjct: 1520 TVRECARSQGFPDRYQFYGNIIH 1542
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PEL+V L NS YAA RSTA+GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 1338 MHVFASPELRVSLNGNSQYAAARSTASGAPFRAITVRDTIGDLPPVGNGASNPTIE---- 1393
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
YK+EPV WFQK+IRGD VL DHISK M+ELN+IRCQ+IPK+PG+DWR LP EKV
Sbjct: 1394 --YKNEPVSWFQKRIRGDASVLTDHISKEMNELNVIRCQRIPKRPGADWRDLPEEKVKLS 1451
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1452 TGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRIL 1511
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D YKF G+IQH
Sbjct: 1512 TVRECARSQGFPDGYKFSGNIQH 1534
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PEL+V L NS YAA RSTA+GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 1317 MHVFASPELRVSLNGNSQYAAARSTASGAPFRAITVRDTIGDLPPVGNGASNPTIE---- 1372
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
YK+EPV WFQK+IRGD VL DHISK M+ELN+IRCQ+IPK+PG+DWR LP EKV
Sbjct: 1373 --YKNEPVSWFQKRIRGDTSVLTDHISKEMNELNVIRCQRIPKRPGADWRDLPEEKVKLS 1430
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1431 TGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRIL 1490
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D YKF G+IQH
Sbjct: 1491 TVRECARSQGFPDGYKFSGNIQH 1513
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ S Y+AVRSTA GAPFRAITVRDTIGDLP VGNGAS T +E
Sbjct: 1302 MHVFAAPELKITLSEKSQYSAVRSTAYGAPFRAITVRDTIGDLPDVGNGASKTNLE---- 1357
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y ++PV WFQKKIRGDM+VL DHISK M+ELNLIRC+KIPK+PG+DWR LP EKV
Sbjct: 1358 --YGNDPVSWFQKKIRGDMVVLTDHISKEMNELNLIRCKKIPKRPGADWRDLPDEKVKLS 1415
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1416 TGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1475
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1476 TVRECARSQGFPDSYQFSGNIHH 1498
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 169/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L++N YAAVRSTA GAPFRAITVRDTIGDLPAV NGAS T +E
Sbjct: 151 MHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLE---- 206
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y++ PV WFQKKIRG+M+VL DHISK M+ELNLIRCQKIPKQPG+DWR LP EKV
Sbjct: 207 --YQNGPVSWFQKKIRGNMMVLTDHISKEMNELNLIRCQKIPKQPGADWRSLPDEKVALS 264
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDR++
Sbjct: 265 TGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPXQDRLV 324
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECARSQGF DSYKF G+IQH
Sbjct: 325 SVRECARSQGFPDSYKFSGNIQH 347
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 169/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ NS+YAAVRSTA+GAPFR ITVRDTIGDLPAVGNGAS ME
Sbjct: 1334 MHVFGVPELKINLSSNSYYAAVRSTASGAPFRPITVRDTIGDLPAVGNGASKVNME---- 1389
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+PV WFQKKIRG+M VL DHISK M+ELNLIRC++IPK+PG+DW+ LP EKV
Sbjct: 1390 --YESDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCKRIPKRPGADWKDLPEEKVKLS 1447
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRII
Sbjct: 1448 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRII 1507
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+ H
Sbjct: 1508 TVRECARSQGFPDSYQFYGNTLH 1530
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ NS+Y+AVRSTA GAPFR+ITVRDTIGDLPAVGNGAS +E
Sbjct: 1341 MHVFGVPELKISLSGNSYYSAVRSTAGGAPFRSITVRDTIGDLPAVGNGASKVNLE---- 1396
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+P+ WFQKKIRG+M VL +HISK M+ELNLIRCQ+IPK+PG+DW+ LP EKV
Sbjct: 1397 --YESDPISWFQKKIRGEMAVLTEHISKEMNELNLIRCQRIPKRPGADWQCLPDEKVKLS 1454
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1455 TGQIVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRIL 1514
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1515 TVRECARSQGFRDSYQFSGNILH 1537
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 169/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ NS+YAAVRSTA+GAPFR ITVRDTIGDLPAVGNGAS +E
Sbjct: 1326 MHVFGVPELKINLSSNSYYAAVRSTASGAPFRPITVRDTIGDLPAVGNGASKVNIE---- 1381
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+PV WFQKKIRG+M VL DHISK M+ELNLIRC++IPK+PG+DW+ LP EKV
Sbjct: 1382 --YESDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCKRIPKRPGADWKDLPEEKVKLS 1439
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRII
Sbjct: 1440 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRII 1499
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+ H
Sbjct: 1500 TVRECARSQGFPDSYQFYGNTLH 1522
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 166/203 (81%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ S YAAVRSTA GAPFRAITVRDTIGDLP V NGAS T +E
Sbjct: 1322 MHVFAAPELKITLSEKSQYAAVRSTAYGAPFRAITVRDTIGDLPDVANGASKTNLE---- 1377
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y ++P+ WFQKKIRGDM+VL DHISK M+ELNLIRC+ IPK+PG+DWR LP EKV
Sbjct: 1378 --YGNDPISWFQKKIRGDMVVLTDHISKEMNELNLIRCKNIPKRPGADWRDLPDEKVKLS 1435
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1436 TGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPEQDRIL 1495
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D+Y+F G+IQH
Sbjct: 1496 TVRECARSQGFPDNYQFFGNIQH 1518
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF+ PELK+ LA N YAAV STANGAP RAITVRDTIG+LPAVGNGAS T ME
Sbjct: 1327 MHVFSAPELKITLAENVQYAAVCSTANGAPLRAITVRDTIGELPAVGNGASRTNME---- 1382
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+P+ WFQKKIRG+M VL DHISK M+ELNLIRCQKIPK+PG DWR LP EK+
Sbjct: 1383 --YQSDPISWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGCDWRDLPDEKIKLS 1440
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLP+TA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1441 TGQLVDLIPWCLPHTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRIL 1500
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D Y+F G+I H
Sbjct: 1501 TVRECARSQGFPDHYQFSGNIIH 1523
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 170/203 (83%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ SHYAAVRSTA+GAPFR++TVRDTIGDLPAVGNGAS T +E
Sbjct: 1330 MHVFGVPELKIALSETSHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIE---- 1385
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +PV WFQ+KIRG+ + L+DHI+K M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 1386 --YQVDPVSWFQRKIRGNSITLSDHITKEMNELNLIRCQRIPKRPGADWRDLPDEKVKLS 1443
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1444 NGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIV 1503
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1504 TVRECARSQGFPDSYQFAGNILH 1526
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 163/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 1302 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVGNGASKLTLE---- 1357
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG+M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 1358 --YGGEPVSWFQKKIRGNMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 1415
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1416 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1475
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1476 TVRECARSQGFPDSYEFAGNIQN 1498
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 163/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDT+GDLP VGNGAS T+E
Sbjct: 1302 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTVGDLPKVGNGASKLTLE---- 1357
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG+M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 1358 --YGGEPVSWFQKKIRGNMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 1415
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1416 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1475
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1476 TVRECARSQGFPDSYEFAGNIQN 1498
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 162/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 1291 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVGNGASKLTLE---- 1346
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 1347 --YGGEPVSWFQKKIRGSMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 1404
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1405 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1464
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1465 TVRECARSQGFPDSYEFAGNIQN 1487
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 163/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELKV L N HYAAVRST GAPFRAITVRDTIGDLP V NGAS TT+E
Sbjct: 1534 MHVFAAPELKVALPGNKHYAAVRSTQAGAPFRAITVRDTIGDLPMVTNGASKTTLE---- 1589
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +P+ WFQK IR +M+VL DHISK M+ELNLIRCQ+IPK+ G+DW LP EKV
Sbjct: 1590 --YRCDPISWFQKNIRANMMVLTDHISKEMNELNLIRCQRIPKRRGADWHDLPEEKVKLS 1647
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1648 TGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRIV 1707
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1708 TVRECARSQGFPDSYQFYGNILH 1730
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 162/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 550 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVGNGASKLTLE---- 605
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 606 --YGGEPVSWFQKKIRGSMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 663
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 664 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 723
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 724 TVRECARSQGFPDSYEFAGNIQN 746
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 168/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ HYAAVRSTA+GAPFR++TVRDTIGDLPAVGNGAS T +E
Sbjct: 1330 MHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIE---- 1385
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +P+ WFQ+KIRG+ + L+DHI+K M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 1386 --YQVDPISWFQRKIRGNSITLSDHITKEMNELNLIRCQRIPKRPGADWRDLPDEKVKLC 1443
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS TDP PMG VG CFHP+QDRI+
Sbjct: 1444 NGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSFTDPQPMGKVGMCFHPDQDRIV 1503
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1504 TVRECARSQGFPDSYQFAGNILH 1526
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 168/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ HYAAVRSTA+GAPFR++TVRDTIGDLPAVGNGAS T +E
Sbjct: 1328 MHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIE---- 1383
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +P+ WFQ+KIRG+ + L+DHI+K M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 1384 --YQVDPISWFQRKIRGNSITLSDHITKEMNELNLIRCQRIPKRPGADWRDLPDEKVKLC 1441
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS TDP PMG VG CFHP+QDRI+
Sbjct: 1442 NGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSFTDPQPMGKVGMCFHPDQDRIV 1501
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1502 TVRECARSQGFPDSYQFAGNILH 1524
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 167/203 (82%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ S+YAAVRSTA+GAPFR++TVRDTIGDLP VGNGAS T +E
Sbjct: 1331 MHVFAVPELKIALSETSYYAAVRSTASGAPFRSLTVRDTIGDLPVVGNGASKTCIE---- 1386
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +PV WFQKKIRG + L+DHISK M+ELNLIRCQ+IPK+PG+DWR L EKV
Sbjct: 1387 --YQGDPVSWFQKKIRGSSITLSDHISKEMNELNLIRCQRIPKRPGADWRDLEDEKVKLS 1444
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1445 NGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIV 1504
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1505 TVRECARSQGFPDSYQFAGNILH 1527
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 162/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDTIGDLP V NGAS T+E
Sbjct: 1162 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVENGASKLTLE---- 1217
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG+M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 1218 --YGGEPVSWFQKKIRGNMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 1275
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1276 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1335
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1336 TVRECARSQGFPDSYEFAGNIQN 1358
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 163/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDTIGDLP VGNGAS T+E
Sbjct: 151 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTIGDLPKVGNGASKLTLE---- 206
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG+M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV
Sbjct: 207 --YGGEPVSWFQKKIRGNMMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLS 264
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 265 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 324
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 325 TVRECARSQGFPDSYEFAGNIQN 347
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 162/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA RSTA GAPFRAITVRDT+GDLP VGNGAS T+E
Sbjct: 1223 MHVFASPELKITLPDGQYYAAARSTAGGAPFRAITVRDTVGDLPKVGNGASKLTLE---- 1278
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EPV WFQKKIRG+M+VLNDHISK M+ELNLIRCQ I K+PG DW LP EKV
Sbjct: 1279 --YGGEPVSWFQKKIRGNMMVLNDHISKEMNELNLIRCQHIQKRPGCDWHDLPDEKVKLS 1336
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
DLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1337 NGQMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1396
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1397 TVRECARSQGFPDSYEFAGNIQN 1419
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 163/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF+ PELK+ L+ YAAVRST NGAP RAITVRDTIG+L AVGNGAS T ME
Sbjct: 1256 MHVFSAPELKITLSEKVQYAAVRSTTNGAPLRAITVRDTIGELQAVGNGASRTNME---- 1311
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+S+PV WFQ KIRG+M VL HISK M+ELNLIRCQKIPK+PG DWR LP EK+
Sbjct: 1312 --YQSDPVSWFQTKIRGNMAVLTYHISKEMNELNLIRCQKIPKRPGCDWRDLPDEKIRLS 1369
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1370 SGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRIL 1429
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D Y+F G+I H
Sbjct: 1430 TVRECARSQGFPDCYQFYGNIIH 1452
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 168/201 (83%), Gaps = 13/201 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L+ HYAAVRSTA+GAPFR++TVRDTIGDLPAVGNGAS T +E
Sbjct: 200 MHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIE---- 255
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +P+ WFQ+KIRG+ + L+DHI+K M+ELNLIRCQ+IPK+PG+DWR LP EKV
Sbjct: 256 --YQVDPISWFQRKIRGNSITLSDHITKEMNELNLIRCQRIPKRPGADWRDLPDEKVKLC 313
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 314 NGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIV 373
Query: 174 TVRECARSQGFSDSYKFVGDI 194
TVRECARSQGF DSY+F G+I
Sbjct: 374 TVRECARSQGFPDSYQFAGNI 394
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 164/203 (80%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L N +YAAVRST GAPFR+ITVRDTIGDLP V NGAS T++E
Sbjct: 1318 MHVFAAPELKIALPENKYYAAVRSTQTGAPFRSITVRDTIGDLPMVSNGASRTSIE---- 1373
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+ +P+ WFQKKIR +M+VL DHISK M+ELNLIRCQ+IPK+ G+DW+ LP EKV
Sbjct: 1374 --YQMDPISWFQKKIRANMMVLTDHISKEMNELNLIRCQRIPKRRGADWQDLPDEKVKLS 1431
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEG+FPTS+TDP PMG VG CFHP+Q RI+
Sbjct: 1432 SGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGSFPTSITDPQPMGKVGMCFHPDQHRIV 1491
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1492 TVRECARSQGFPDSYQFYGNILH 1514
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1322 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1377
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1378 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1435
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1436 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1495
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1496 TVRECARSQGFPDNYQFAGNIQ 1517
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1303 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1358
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1359 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1416
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1417 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1476
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1477 TVRECARSQGFPDNYQFAGNIQ 1498
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1260 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1315
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1316 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1373
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1374 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1433
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1434 TVRECARSQGFPDNYQFAGNIQ 1455
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1329 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1384
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1385 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1442
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1443 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1502
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1503 TVRECARSQGFPDNYQFAGNIQ 1524
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1271 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1326
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1327 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1384
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1385 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1444
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1445 TVRECARSQGFPDNYQFAGNIQ 1466
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 1312 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 1367
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDH+SK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 1368 --YGGEPISWFQKKIRGNTIALNDHVSKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 1425
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1426 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1485
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 1486 TVRECARSQGFPDNYQFAGNIQ 1507
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 162/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L++ HYAAVRST GAPFR ITVRDTIGDLP+V NG S T E
Sbjct: 1298 MHVFGVPELKISLSKGVHYAAVRSTQYGAPFRPITVRDTIGDLPSVVNGESNTKRE---- 1353
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
YK++P+ WFQK+IRGD + L DHI K M+ELNLIRC+KIPK+PG+DWR LP EKV
Sbjct: 1354 --YKAQPISWFQKEIRGDNIALTDHICKEMNELNLIRCKKIPKRPGADWRDLPEEKVTLS 1411
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFHP+QDRII
Sbjct: 1412 KGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRII 1471
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY F G+I H
Sbjct: 1472 TVRECARSQGFPDSYVFQGNIIH 1494
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L YAAV+STA GAPFR+ITVRDTIGDLPAV NGA T++
Sbjct: 1302 MHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ---- 1357
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y S PV WFQKKIR DM LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 1358 --YGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 1415
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP QDRII
Sbjct: 1416 TGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRII 1475
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1476 TVRECARSQGFPDSYRFAGNIQN 1498
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L YAAV+STA GAPFR+ITVRDTIGDLPAV NGA T++
Sbjct: 1302 MHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ---- 1357
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y S PV WFQKKIR DM LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 1358 --YGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 1415
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP QDRII
Sbjct: 1416 TGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRII 1475
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1476 TVRECARSQGFPDSYRFAGNIQN 1498
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L YAAV+STA GAPFR+ITVRDTIGDLPAV NGA T++
Sbjct: 1297 MHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ---- 1352
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y S PV WFQKKIR DM LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 1353 --YGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 1410
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP QDRII
Sbjct: 1411 TGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRII 1470
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 1471 TVRECARSQGFPDSYRFAGNIQN 1493
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 219 MHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE---- 274
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP+ WFQKKIRG+ + LNDHISK M+ELNLIRCQ+IPK+PG DW LP EKV
Sbjct: 275 --YGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLS 332
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 333 SGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 392
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D+Y+F G+IQ
Sbjct: 393 TVRECARSQGFPDNYQFAGNIQ 414
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 142/202 (70%), Positives = 160/202 (79%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFR+ITVRDTIGDLP V NGAS T++
Sbjct: 1303 MHVFASPELKITLPDGKYYAAAKSTAGGAPFRSITVRDTIGDLPPVENGASKPTIQ---- 1358
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y SEP+ WFQKKIRGD+L LND ISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 1359 --YGSEPISWFQKKIRGDVLSLNDQISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 1416
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
V+LIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1417 SGQMVELIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1476
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF D Y+F G+IQ
Sbjct: 1477 TVRECARSQGFLDGYRFAGNIQ 1498
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ + HYAAVRST+ GAPFR+ITVRDTIGDLP V NGAS T++
Sbjct: 1315 MHVFASPELKITMPGGVHYAAVRSTSGGAPFRSITVRDTIGDLPPVPNGASKPTIK---- 1370
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y SEPV WFQK IRG+M LNDHISK M+ELN IRCQ+IPK PG+DW LP EKV
Sbjct: 1371 --YGSEPVSWFQKLIRGNMFALNDHISKEMNELNFIRCQRIPKHPGADWHDLPDEKVKLS 1428
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDWEGNFPTS+TDP PMG VG CFH +QDRII
Sbjct: 1429 TGQIVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHSDQDRII 1488
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF D Y F G+IQ+
Sbjct: 1489 TVRECARSQGFLDGYHFSGNIQN 1511
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/202 (70%), Positives = 156/202 (77%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGA+ +E
Sbjct: 1314 MHVFASPELKITLPDGKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGANKLILE---- 1369
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y EP WFQKKIRG + LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 1370 --YGGEPTSWFQKKIRGSTIALNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 1427
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRII
Sbjct: 1428 SGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRII 1487
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF DSY+F G IQ
Sbjct: 1488 TVRECARSQGFPDSYQFAGTIQ 1509
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L YAAV+STA GAPFR+ITVRDTIGDLPAV NGA T++
Sbjct: 188 MHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ---- 243
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y S PV WFQKKIR DM LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 244 --YGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 301
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP QDRII
Sbjct: 302 TGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRII 361
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 362 TVRECARSQGFPDSYRFAGNIQN 384
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 159/203 (78%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L YAAV+STA GAPFR+ITVRDTIGDLPAV NGA T++
Sbjct: 151 MHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQ---- 206
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y S PV WFQKKIR DM LNDHISK M+ELNLIRC+ IPK+PG DW LP EKV
Sbjct: 207 --YGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLS 264
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP QDRII
Sbjct: 265 TGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRII 324
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+IQ+
Sbjct: 325 TVRECARSQGFPDSYRFAGNIQN 347
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P+LK+ L++ HYAAVRSTA GAPFR ITVRDTIGDLP+V NG S+T E
Sbjct: 1301 MHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGESMTNKE---- 1356
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YK V WFQK+IRG+M+ L DHI KAM++LNLIRCQ IPK+PG+DW LP+EKV
Sbjct: 1357 --YKDVAVSWFQKEIRGNMIALTDHICKAMNQLNLIRCQHIPKRPGADWHDLPNEKVKLS 1414
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
++IPWCLPNTA++HN WKGLFGRLDW+GNFPTS+TDP PMG VG CFHP+QDRI+
Sbjct: 1415 NGHVEEMIPWCLPNTAKRHNGWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRIL 1474
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1475 TVRECARSQGFPDSYEFAGNIIH 1497
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 151/203 (74%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
+HVF +LK+ L+ NS YAA T GAP R+ITVRDTIGDLP V NG
Sbjct: 1245 VHVFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKP------E 1298
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
+PY +EP WFQK IRG VL DHI K M+ELN IRCQ+IPK+PG+DWR LP EKV
Sbjct: 1299 TPYGNEPQSWFQKNIRGGATVLRDHICKEMNELNFIRCQRIPKRPGADWRDLPDEKVKLS 1358
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTAE+HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1359 TGQTVDLIPWCLPNTAERHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPEQDRIV 1418
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSYKF G +Q+
Sbjct: 1419 TVRECARSQGFPDSYKFFGTMQN 1441
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 151/203 (74%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
+HVF +LK+ L+ NS YAA T GAP R+ITVRDTIGDLP V NG
Sbjct: 1109 VHVFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKP------E 1162
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
+PY +EP WFQK IRG VL DHI K M+ELN IRCQ+IPK+PG+DWR LP EKV
Sbjct: 1163 TPYGNEPQSWFQKNIRGGATVLRDHICKEMNELNFIRCQRIPKRPGADWRDLPDEKVKLS 1222
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTAE+HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP QDRI+
Sbjct: 1223 TGQTVDLIPWCLPNTAERHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPEQDRIV 1282
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSYKF G +Q+
Sbjct: 1283 TVRECARSQGFPDSYKFFGTMQN 1305
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 154/203 (75%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P+LK+ L++ HYAAVRSTA GAPFR ITVRDTIGDLP+V NG S T E
Sbjct: 1303 MHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKE---- 1358
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YK V WFQK+IRG+ + L DHI KAM+ELNLIRC+ IP +PG+DW LP KV
Sbjct: 1359 --YKEVAVSWFQKEIRGNTIALTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLS 1416
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
++IP+CLPNTAE+HN WKGL+GRLDW+GNFPTSVTDP PMG VG CFHP Q RI+
Sbjct: 1417 DGRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRIL 1476
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1477 TVRECARSQGFPDSYEFAGNINH 1499
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 154/203 (75%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P+LK+ L++ HYAAVRSTA GAPFR ITVRDTIGDLP+V NG S T E
Sbjct: 372 MHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKE---- 427
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YK V WFQK+IRG+ + L DHI KAM+ELNLIRC+ IP +PG+DW LP KV
Sbjct: 428 --YKEVAVSWFQKEIRGNTIALTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLS 485
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
++IP+CLPNTAE+HN WKGL+GRLDW+GNFPTSVTDP PMG VG CFHP Q RI+
Sbjct: 486 DGRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRIL 545
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 546 TVRECARSQGFPDSYEFAGNINH 568
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 150/202 (74%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF +LK+ L + YAAVR GAP RA+TV+DTI DLP V NGAS E+ +S
Sbjct: 1338 MHVFGSSQLKIALPGGASYAAVRDAGKGAPLRAMTVKDTIYDLPPVENGAS--KEEIKYS 1395
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
P PV WFQK+IRG+ L DHI+K M+ELNL RC+ IPK PG+DWR LP K+
Sbjct: 1396 DP----PVSWFQKQIRGNETALYDHIAKEMNELNLERCKHIPKYPGADWRTLPDIKIKLS 1451
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIPWCLPNTA++HNQWKGLFGRLDW+GNFPTSVTDP PMG VG CFHP QDRI+
Sbjct: 1452 TGTMVDLIPWCLPNTADRHNQWKGLFGRLDWDGNFPTSVTDPQPMGKVGMCFHPEQDRIV 1511
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
TVRECARSQGF DSYKF G IQ
Sbjct: 1512 TVRECARSQGFPDSYKFSGTIQ 1533
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 152/203 (74%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P+LK+ L++ HYAAVRSTA GAPFR ITVRDTIGDLP+V NG S T E
Sbjct: 1334 MHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKE---- 1389
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YK V WFQK+IRG+ + L DHI KAM+ELNLIRC+ IP +PG+DW LP KV
Sbjct: 1390 --YKEVAVSWFQKEIRGNTIALTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLS 1447
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
++ P+CLPNTAE+HN WKGL+GRLDW+GNFPTSVTDP PMG VG CFH Q RI+
Sbjct: 1448 DGRVEEMTPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHLEQHRIL 1507
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G+I H
Sbjct: 1508 TVRECARSQGFPDSYEFAGNINH 1530
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 144/203 (70%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L R HY VR+T GAPFR+ITVRDTIGDLP V NG S E
Sbjct: 1281 MHVFDNPGSKISLPRGLHYDTVRNTKFGAPFRSITVRDTIGDLPLVENGESKINKE---- 1336
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
Y++ PV WFQKKIRG+M VL DHI K ++ELNLIRC+KIPK+PG+DWR LP E V
Sbjct: 1337 --YRTTPVSWFQKKIRGNMSVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLS 1394
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
L P L TA+ HN+WKGL+GRLDW+GN P S+TDP PMG VG CFHP QDRII
Sbjct: 1395 NGLVEKLRPLALSKTAKNHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRII 1454
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G +H
Sbjct: 1455 TVRECARSQGFPDSYEFSGTTKH 1477
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 150/203 (73%), Gaps = 18/203 (8%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF GPELK+ ++YAAVRSTA G PFRAITVRD IGDLP +GNGA TTME
Sbjct: 1013 MHVFPGPELKI-----NNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTME---- 1063
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRV-------LP 113
Y E W+Q+K RGDM +L DHISK M+ELNLIRC+KIPK+PG+DW L
Sbjct: 1064 --YPREASSWYQRKFRGDMSILTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRLS 1121
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
S ++ L+P L N ++HNQWKG+ GRLDWEG+FPTS+T+P P+G VG CFHP+QDRI+
Sbjct: 1122 SGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQDRIL 1181
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECAR+QGF DSYKF G + H
Sbjct: 1182 SVRECARTQGFPDSYKFSGQMHH 1204
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 147/203 (72%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF +L + L++ YAAVRST GAPFR ITVRDTIGDLP V NG S E
Sbjct: 1289 MHVFNVSQLNISLSKGLRYAAVRSTQQGAPFRPITVRDTIGDLPPVENGESNIDKE---- 1344
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y+++PV WFQK+IRG+ V DH+S+ M+E NLIRC++IPK+ G+DWR LP EKV
Sbjct: 1345 --YETDPVSWFQKEIRGNKNVPTDHLSQTMNEHNLIRCKRIPKRSGADWRDLPDEKVTLS 1402
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
VDLIP CL K QWKGLFGRLDWEGNFPT VT P PMGMVG CFHP+QDRI+
Sbjct: 1403 TGLVVDLIPGCLAAKPGKKKQWKGLFGRLDWEGNFPTCVTKPGPMGMVGKCFHPDQDRIV 1462
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F GDI H
Sbjct: 1463 TVRECARSQGFPDSYEFEGDIAH 1485
>gi|242037791|ref|XP_002466290.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
gi|241920144|gb|EER93288.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
Length = 196
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/174 (71%), Positives = 139/174 (79%), Gaps = 13/174 (7%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
APFR+ITVRDT+GDLP V NGAS T++ Y SEPV WFQKKIR ++LNDHISK
Sbjct: 1 APFRSITVRDTVGDLPPVENGASKPTIQ------YGSEPVSWFQKKIRDSTVLLNDHISK 54
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKV-------VDLIPWCLPNTAEKHNQWKGLFGR 141
M+ELNLIRC+ IPK+PG DW LP EKV VDLIPWCLPNTA++HNQWKGL+GR
Sbjct: 55 EMNELNLIRCKHIPKRPGCDWHELPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLYGR 114
Query: 142 LDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
LDWEGNFPTSVTDP PMG VG CFHP QDRI+TVRECARSQGF DSY+F G IQ
Sbjct: 115 LDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYRFAGSIQ 168
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 147/199 (73%), Gaps = 13/199 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L+R H AAV +T +GAPFR+ITVRDTIGDLP V NG S +
Sbjct: 1275 MHVFNNPGFKISLSRGLHCAAVHNTKSGAPFRSITVRDTIGDLPPVENGES------EIN 1328
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
YK PV WFQK++RG+M VL DHI K M+ELNLIRC+K+PK+PG+ WR LP E V+
Sbjct: 1329 KKYKDVPVSWFQKEMRGNMTVLTDHICKQMNELNLIRCKKVPKRPGASWRDLPDENVILS 1388
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
L+P+ + N A + N++KGL+GRLDW+GNFPTS+TDP PMG VG CFHP+QDRII
Sbjct: 1389 NGLVEKLVPFAMSNKANEQNRYKGLYGRLDWQGNFPTSITDPQPMGFVGVCFHPDQDRII 1448
Query: 174 TVRECARSQGFSDSYKFVG 192
T+RECARSQGF DSY+F G
Sbjct: 1449 TIRECARSQGFPDSYEFSG 1467
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 150/203 (73%), Gaps = 18/203 (8%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF GPELK+ ++YAAVRSTA G PFRAITVRD IGDLP +GNGA TTME
Sbjct: 235 MHVFPGPELKI-----NNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTME---- 285
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRV-------LP 113
Y E W+Q+K RGDM +L DHISK M+ELNLIRC+KIPK+PG+DW L
Sbjct: 286 --YPREASSWYQRKFRGDMSILTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRLS 343
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
S ++ L+P L N ++HNQWKG+ GRLDWEG+FPTS+T+P P+G VG CFHP+QDRI+
Sbjct: 344 SGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQDRIL 403
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECAR+QGF DSYKF G + H
Sbjct: 404 SVRECARTQGFPDSYKFSGQMHH 426
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 149/203 (73%), Gaps = 18/203 (8%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF GPELK+ ++YAAVRSTA G PFRAITVRD IGDLP +GNGA TTME
Sbjct: 152 MHVFPGPELKI-----NNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTME---- 202
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRV-------LP 113
Y E W+Q+K RGDM +L DHISK M+ELNLIRC+KIPK+PG+DW L
Sbjct: 203 --YPREASSWYQRKFRGDMSILTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRLS 260
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
S ++ L+P L N ++HNQWKG+ GRLDWEG+FPTS+T+P P+G VG CFHP+QDRI+
Sbjct: 261 SGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQDRIL 320
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
+VRECAR+QGF D YKF G + H
Sbjct: 321 SVRECARTQGFPDXYKFSGQMHH 343
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 144/195 (73%), Gaps = 13/195 (6%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSS 61
HV +L V L YAAVR GAPFRAITVRDTI DLP V NGA T++ ++
Sbjct: 96 HVSASSQLGVTLPGGGQYAAVRDAGLGAPFRAITVRDTIADLPPVANGAD--TLKTVYTQ 153
Query: 62 PYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV---- 117
P +S WFQ IRG VL DHISK M+ELNLIRCQ+IPK+PG+D R LP+EK+
Sbjct: 154 PAES----WFQMHIRGKTDVLTDHISKEMNELNLIRCQRIPKRPGADCRDLPAEKIKLST 209
Query: 118 ---VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
VDLIPWCLPNTA +HNQWKGLFGRLDW+GNFPTS+TDP PMG VG CFHP Q+RI+T
Sbjct: 210 GQLVDLIPWCLPNTAARHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPVQNRIVT 269
Query: 175 VRECARSQGFSDSYK 189
VRECARSQGF DSYK
Sbjct: 270 VRECARSQGFPDSYK 284
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 147/202 (72%), Gaps = 13/202 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L+R HYAAV+ST GAPFR+ITVRDTIGDLP V +G S E
Sbjct: 1255 MHVFNNPGFKISLSRRLHYAAVQSTKFGAPFRSITVRDTIGDLPPVESGESKINKE---- 1310
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
Y PV WFQK++RG+ +VL DHI + M+ELNLIRC+KIPK PG+DWR LP E V
Sbjct: 1311 --YDIVPVSWFQKEMRGNKIVLTDHICQKMNELNLIRCKKIPKTPGADWRDLPDENVKLS 1368
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
V LIP L N A++HN ++GL+GRLDW+GN PTS+T P PMG VG CFHP+QDRII
Sbjct: 1369 NGVVVKLIPSGLINKAKEHNGYRGLYGRLDWQGNLPTSITTPQPMGWVGMCFHPDQDRII 1428
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
+VRECARSQGF DSY+F G I+
Sbjct: 1429 SVRECARSQGFPDSYEFSGKIK 1450
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 140/203 (68%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L R Y A +T GAPFR+ITVRDTIGDLP V NG S E G
Sbjct: 1314 MHVFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYG-- 1371
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
+ P WFQKKIRG+M VL DHI K ++ELNLIRC+KIPK+PG+DWR LP E V
Sbjct: 1372 ----TTPASWFQKKIRGNMSVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLS 1427
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
L P L TA+ HN+WKGL+GRLDW+GN P S+TDP PMG VG CFHP QDRII
Sbjct: 1428 NGLVEKLRPLALSKTAKNHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRII 1487
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G +H
Sbjct: 1488 TVRECARSQGFPDSYEFSGTTKH 1510
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 140/203 (68%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L R Y A +T GAPFR+ITVRDTIGDLP V NG S E G
Sbjct: 1286 MHVFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYG-- 1343
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
+ P WFQKKIRG+M VL DHI K ++ELNLIRC+KIPK+PG+DWR LP E V
Sbjct: 1344 ----TTPASWFQKKIRGNMSVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLS 1399
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
L P L TA+ HN+WKGL+GRLDW+GN P S+TDP PMG VG CFHP QDRII
Sbjct: 1400 NGLVEKLRPLALSKTAKNHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRII 1459
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G +H
Sbjct: 1460 TVRECARSQGFPDSYEFSGTTKH 1482
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 140/203 (68%), Gaps = 13/203 (6%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L R Y A +T GAPFR+ITVRDTIGDLP V NG S E G
Sbjct: 1288 MHVFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYG-- 1345
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-- 118
+ P WFQKKIRG+M VL DHI K ++ELNLIRC+KIPK+PG+DWR LP E V
Sbjct: 1346 ----TTPASWFQKKIRGNMSVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLS 1401
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
L P L TA+ HN+WKGL+GRLDW+GN P S+TDP PMG VG CFHP QDRII
Sbjct: 1402 NGLVEKLRPLALSKTAKNHNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRII 1461
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
TVRECARSQGF DSY+F G +H
Sbjct: 1462 TVRECARSQGFPDSYEFSGTTKH 1484
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 142/205 (69%), Gaps = 16/205 (7%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
+HVF P+L +KL Y AV +GAP R +TV+D IGDLP + NGA++ M+
Sbjct: 229 LHVFHSPQLTIKLPGGVEYTAV-PKGSGAPLRTVTVKDAIGDLPPLTNGANLEDMQ---- 283
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQ-PGSDWRVL------- 112
Y P+ FQK IRG VL+DHI K M+ELNL RC+ IPK PG+DWRVL
Sbjct: 284 --YAGPPISAFQKAIRGGCTVLHDHICKEMNELNLERCRCIPKNTPGADWRVLQEIVAAN 341
Query: 113 PSEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
P + L+PWCLPNTA++HN W+GLFGRLD+ G+FPTSVTDP PMG VG FHP+QDR
Sbjct: 342 PDRTLFKPLVPWCLPNTADRHNGWRGLFGRLDYGGHFPTSVTDPQPMGKVGQVFHPDQDR 401
Query: 172 IITVRECARSQGFSDSYKFVGDIQH 196
I++VRECAR+QGF DS++F G++ +
Sbjct: 402 IVSVRECARAQGFPDSFRFYGNVHN 426
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 137/202 (67%), Gaps = 25/202 (12%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P K+ L++ HYAAV+ST GAPFR+ITVRD IGDLP + +G S E
Sbjct: 1190 MHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGESKINKE---- 1245
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--- 117
++RG M VL DHI K M+ELNLIRC+KIPK PG+DWR LP E V
Sbjct: 1246 -------------EMRGSMTVLTDHICKKMNELNLIRCKKIPKTPGADWRDLPDEHVNLS 1292
Query: 118 ----VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
+++P L N A+ HN +KGL+GRLDW GN PT +T+ PMG+VG CFHP+QDRII
Sbjct: 1293 NGIVKNIVPNLL-NKAKDHNGYKGLYGRLDWHGNLPTCITNLQPMGLVGMCFHPDQDRII 1351
Query: 174 TVRECARSQGFSDSYKFVGDIQ 195
+VRECARSQGF DSYKF G+I+
Sbjct: 1352 SVRECARSQGFPDSYKFSGNIK 1373
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 136/209 (65%), Gaps = 22/209 (10%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MH F P+L + L Y AV T GAP R +TVRD I DLP + NG V ME
Sbjct: 1131 MHCFRTPQLTINLPGGVQYRAVPQTV-GAPLRPVTVRDAIADLPEIENGHMVEEME---- 1185
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQ-PGSDWRVLPSEKVVD 119
Y PV FQ+ +RGD L DHISK M+ELNL RC+ IPK PG+DWRVL E++V
Sbjct: 1186 --YVGGPVSAFQQHVRGDCTQLTDHISKQMNELNLERCRCIPKNCPGADWRVL--EEIVK 1241
Query: 120 ------------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP 167
L+PWCLPNTA++HN W+GLFGRLDW G+FPTS TDP PMG VG FHP
Sbjct: 1242 ADPGREKFKGQPLVPWCLPNTADRHNGWRGLFGRLDWNGHFPTSTTDPQPMGKVGQVFHP 1301
Query: 168 NQDRIITVRECARSQGFSDSYKFVGDIQH 196
QDRI++VRECAR+QGF D ++FVG + +
Sbjct: 1302 EQDRIVSVRECARAQGFPDKHRFVGTVHN 1330
>gi|194698662|gb|ACF83415.1| unknown [Zea mays]
Length = 163
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 106/125 (84%), Gaps = 7/125 (5%)
Query: 79 MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-------VDLIPWCLPNTAEK 131
M+VLNDHISK M+ELNLIRCQ IPK+PG DW LP EKV DLIPWCLPNTA++
Sbjct: 1 MMVLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLSNGQMADLIPWCLPNTAKR 60
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HNQWKGL+GRLDWEGNFPTSVTDP PMG VG CFHP+QDRIITVRECARSQGF DSY+F
Sbjct: 61 HNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFA 120
Query: 192 GDIQH 196
G+IQ+
Sbjct: 121 GNIQN 125
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 117/196 (59%), Gaps = 53/196 (27%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF P+LK+ L++ HYAAVRSTA GAPFR ITVRDTIGDLP+V NG S T EV
Sbjct: 1271 MHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKEV--- 1327
Query: 61 SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDL 120
L +V ++
Sbjct: 1328 --------------------------------------------------TLSDGRVEEM 1337
Query: 121 IPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
IP+CLPNTAE+HN WKGL+GRLDW+GNFPTSVTDP PMG VG CFHP Q RI+TVRECAR
Sbjct: 1338 IPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECAR 1397
Query: 181 SQGFSDSYKFVGDIQH 196
SQGF DSY+F G+I H
Sbjct: 1398 SQGFPDSYEFAGNINH 1413
>gi|110737925|dbj|BAF00900.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 164
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 102/129 (79%), Gaps = 7/129 (5%)
Query: 75 IRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-------DLIPWCLPN 127
IRG+ + L DHI KAM+ELNLIRC+ IP +PG+DW LP KV ++IP+CLPN
Sbjct: 1 IRGNTIALTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLSDGRVEEMIPFCLPN 60
Query: 128 TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
TAE+HN WKGL+GRLDW+GNFPTSVTDP PMG VG CFHP Q RI+TVRECARSQGF DS
Sbjct: 61 TAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDS 120
Query: 188 YKFVGDIQH 196
Y+F G+I H
Sbjct: 121 YEFAGNINH 129
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 121/179 (67%), Gaps = 18/179 (10%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-LVLNDHI 86
GAP R +TVRD IGDLP + N A + PY + P FQ+ IRG L DH+
Sbjct: 2026 GAPLRTVTVRDAIGDLPPIDNDAKTDVL------PYTAVPTSAFQRAIRGSAGSELRDHM 2079
Query: 87 SKAMSELNLIRCQKIPKQ-PGSDWRVL-------PSE---KVVDLIPWCLPNTAEKHNQW 135
K M+ELNL RC+ IP+ PG+DWRVL PS K L+P+CLPNTA++HN W
Sbjct: 2080 VKQMNELNLERCRCIPRGVPGADWRVLLKIVAEDPSREFFKGESLVPFCLPNTADRHNGW 2139
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+GL+GRLD G+FPT+ T+P+PMG VG FHP+QDRI++VRECARSQGF D ++F G++
Sbjct: 2140 RGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNV 2198
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 121/179 (67%), Gaps = 18/179 (10%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-LVLNDHI 86
GAP R +TVRD IGDLP + N A + PY + P FQ+ IRG L DH+
Sbjct: 2041 GAPLRTVTVRDAIGDLPPIDNDAKTDVL------PYTAVPTSAFQRAIRGSAGSELRDHM 2094
Query: 87 SKAMSELNLIRCQKIPKQ-PGSDWRVL-------PSE---KVVDLIPWCLPNTAEKHNQW 135
K M+ELNL RC+ IP+ PG+DWRVL PS K L+P+CLPNTA++HN W
Sbjct: 2095 VKQMNELNLERCRCIPRGVPGADWRVLLKIVAEDPSREFFKGESLVPFCLPNTADRHNGW 2154
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+GL+GRLD G+FPT+ T+P+PMG VG FHP+QDRI++VRECARSQGF D ++F G++
Sbjct: 2155 RGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNV 2213
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 133/217 (61%), Gaps = 29/217 (13%)
Query: 1 MHVFTGPELKVKL----ARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTME 56
+H F +L V++ + A A GAP R +TVRD IGDLP V NG++ +
Sbjct: 1936 LHRFKQEQLGVRMRGVGGDGQFFHASGPPAAGAPLRTVTVRDVIGDLPPVENGSTTDPL- 1994
Query: 57 VGFSSPYKSEPVLWFQKKIRGDMLV--------LNDHISKAMSELNLIRCQKIPK-QPGS 107
PY +PV FQ+ IRG + DH+ KAM+ LNL RC+ IPK PG+
Sbjct: 1995 -----PYTGQPVSAFQRAIRGRAAAGGGGGNGEVRDHVVKAMNALNLERCRCIPKGDPGA 2049
Query: 108 DWRVLPSEKVVD----------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
DWRVL D L+PWCLPN+A++HN W+GL+ RLD +G+FPT+ TDP+P
Sbjct: 2050 DWRVLLKLVAEDRSREFFNGQALVPWCLPNSADRHNGWRGLYSRLDPDGHFPTATTDPNP 2109
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG VG FHP+QDRI++VRECARSQGF D ++F G++
Sbjct: 2110 MGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNV 2146
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 126/242 (52%), Gaps = 56/242 (23%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSS 61
HVF L + + NSH + AP+R TV D + DLP + NGA+ ME+G
Sbjct: 999 HVFASKALSLSVTINSHKYQALKRLHSAPYRTTTVYDAMSDLPEIKNGAN--KMEIG--- 1053
Query: 62 PYKSEPVLWFQKKIRGD-MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDL 120
Y +EP+ FQKKIRG M VL DHI K MS L R IP PGSDWR LP+ KVV L
Sbjct: 1054 -YDTEPLTHFQKKIRGKHMQVLRDHICKDMSPLVEARMSYIPCIPGSDWRDLPN-KVVKL 1111
Query: 121 ------------------------------------------------IPWCLPNTAEKH 132
IPWCLP+T +H
Sbjct: 1112 RDGNTTKLLLYLHKDKKQGPGKNGENRGVCACANGKPCDPSDRQFNTLIPWCLPHTGNRH 1171
Query: 133 NQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
N W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VREC+RSQGF DS++F G
Sbjct: 1172 NNWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECSRSQGFPDSFRFYG 1231
Query: 193 DI 194
+I
Sbjct: 1232 NI 1233
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1333 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1388
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1389 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1445
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1446 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1505
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1506 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1565
Query: 190 FVGDI 194
F G+I
Sbjct: 1566 FFGNI 1570
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1333 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1388
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1389 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1445
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1446 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1505
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1506 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1565
Query: 190 FVGDI 194
F G+I
Sbjct: 1566 FFGNI 1570
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1352 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1407
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1408 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1464
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1465 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1524
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1525 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1584
Query: 190 FVGDI 194
F G+I
Sbjct: 1585 FFGNI 1589
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1397 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1452
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1453 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1509
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1510 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1569
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1570 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1629
Query: 190 FVGDI 194
F G+I
Sbjct: 1630 FFGNI 1634
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1318 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1373
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1374 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1430
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1431 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1490
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1491 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1550
Query: 190 FVGDI 194
F G+I
Sbjct: 1551 FFGNI 1555
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1359 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1414
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1415 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1471
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1472 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1531
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1532 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1591
Query: 190 FVGDI 194
F G+I
Sbjct: 1592 FFGNI 1596
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1333 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1388
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1389 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1445
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1446 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1505
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1506 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1565
Query: 190 FVGDI 194
F G+I
Sbjct: 1566 FFGNI 1570
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1334 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1389
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1390 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1446
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1447 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1506
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1507 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1566
Query: 190 FVGDI 194
F G+I
Sbjct: 1567 FFGNI 1571
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1044 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1099
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1100 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1156
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1157 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1216
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1217 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1276
Query: 190 FVGDI 194
F G+I
Sbjct: 1277 FFGNI 1281
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1341 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1396
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1397 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1453
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1454 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1513
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1514 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1573
Query: 190 FVGDI 194
F G+I
Sbjct: 1574 FFGNI 1578
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1215 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1270
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1271 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1327
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1328 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1387
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1388 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1447
Query: 190 FVGDI 194
F G+I
Sbjct: 1448 FFGNI 1452
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 605 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 660
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 661 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 717
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 718 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 777
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 778 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 837
Query: 190 FVGDI 194
F G+I
Sbjct: 838 FFGNI 842
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1216 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1271
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1272 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 1328
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1329 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1388
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1389 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1448
Query: 190 FVGDI 194
F G+I
Sbjct: 1449 FFGNI 1453
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 128/245 (52%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 686 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 741
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 742 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQ 798
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 799 VRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 858
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 859 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 918
Query: 190 FVGDI 194
F G+I
Sbjct: 919 FFGNI 923
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1334 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1389
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R IP PGSDWR LP
Sbjct: 1390 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMPHIPLFPGSDWRDLPNIQ 1446
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1447 VRLGDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1506
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1507 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1566
Query: 190 FVGDI 194
F G+I
Sbjct: 1567 FFGNI 1571
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS + +
Sbjct: 1216 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEI--- 1271
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
PY EP+ WFQ+++RG +L DHI K MS L R IP PGSDWR LP
Sbjct: 1272 ---PYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMPHIPLFPGSDWRDLPNIQ 1328
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1329 VRLGDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTG 1388
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1389 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1448
Query: 190 FVGDI 194
F G+I
Sbjct: 1449 FFGNI 1453
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + +A + Y + + NG +R ITVRDT+ DLP + NGA+ +E+
Sbjct: 415 LHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAA--LEIS- 471
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 472 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 528
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 529 RLRDGTTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPADRQFNTLIPWCLPHTGN 588
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 589 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 648
Query: 191 VGDI 194
G++
Sbjct: 649 FGNV 652
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLA-RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF ++ + + + + + N APFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1201 LHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIRNGASA--LEIS- 1257
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1258 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAGRMRHIPLAPGSDWRDLPNIEV 1314
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1315 RLSDGTTTRKLRYTHHEKKNGRSNTGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGN 1374
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1375 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRL 1434
Query: 191 VGDI 194
G+I
Sbjct: 1435 FGNI 1438
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLA-RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF ++ + + + + + N APFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1229 LHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIRNGASA--LEIS- 1285
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1286 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAGRMRHIPLAPGSDWRDLPNIEV 1342
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1343 RLSDGTTTRKLRYTHHEKKNGRSNTGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGN 1402
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1403 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRL 1462
Query: 191 VGDI 194
G+I
Sbjct: 1463 FGNI 1466
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + +A + Y + + NG +R ITVRDT+ DLP + NGA+ +E+
Sbjct: 1215 LHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAA--LEIS- 1271
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1272 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 1328
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1329 RLRDGTTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPADRQFNTLIPWCLPHTGN 1388
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1389 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1448
Query: 191 VGDI 194
G++
Sbjct: 1449 FGNV 1452
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + +A + Y + + NG +R ITVRDT+ DLP + NGA+ +E+
Sbjct: 1215 LHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAA--LEIS- 1271
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1272 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 1328
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1329 RLRDGTTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPADRQFNTLIPWCLPHTGN 1388
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1389 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1448
Query: 191 VGDI 194
G++
Sbjct: 1449 FGNV 1452
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + +A + Y + + NG +R ITVRDT+ DLP + NGA+ +E+
Sbjct: 1214 LHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAA--LEIS- 1270
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1271 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 1327
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1328 RLRDGTTTKKLRYTHSDKKNGRSGTGALRGVCSCSEGKQCDPADRQFNTLIPWCLPHTGN 1387
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1388 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1447
Query: 191 VGDI 194
G++
Sbjct: 1448 FGNV 1451
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + T +G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1246 LHVFAPRACQLSVVVDDKKFVSNITRTYSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1302
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1303 ----YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1358
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1359 VRLSDGTSTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTG 1418
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1419 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1478
Query: 190 FVGDI 194
G+I
Sbjct: 1479 LFGNI 1483
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + T +G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1268 LHVFAPRACQLSVVVDDKKFVSNITRTYSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1324
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1325 ----YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1380
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1381 VRLSDGITTRKLRYTHHEKKNGRSSTGALRGVCSCAEGKACDPADRQFNTLIPWCLPHTG 1440
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1441 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1500
Query: 190 FVGDI 194
G++
Sbjct: 1501 LFGNV 1505
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 126/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF L V + +++ V + NG +R ITVRDT+ DLP + NGAS +
Sbjct: 170 LHVFAPRACSLNVVVDDKKYFSNV-TRGNGGVYRTITVRDTMSDLPEIRNGASALEIS-- 226
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K +S L R + IP PGSDWR LP+ +
Sbjct: 227 ----YNGEPQSWFQRQIRGTQYQPILKDHICKDLSALVAARMRHIPLAPGSDWRDLPNIE 282
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 283 VRLRDGTSSKKLRYTHPDKKNGRSSSGALRGVCTCSGGVPCDPADRQFNTLIPWCLPHTG 342
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 343 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 402
Query: 190 FVGDI 194
F G++
Sbjct: 403 FFGNV 407
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 125/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + +G P+R ITVRDT+ DLP + NGAS +
Sbjct: 1336 LHVFAPRACQLSVVVDDKKFVSNITRLTSG-PYRTITVRDTMSDLPEIQNGASAPEIS-- 1392
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++R +L DHI K MS L R + IP+ PGSDWR LP+ +
Sbjct: 1393 ----YSGEPQSWFQRQLRDSAYQPILRDHICKDMSPLVAARMKNIPRSPGSDWRDLPNIE 1448
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V+ LIPWCLP+T
Sbjct: 1449 VLLSDGVRTKKLRYNFHDKKNGRSSTGAMRGVCSCYRGTRCSASGXQFNTLIPWCLPHTG 1508
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1509 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFRDTYR 1568
Query: 190 FVGDI 194
F G I
Sbjct: 1569 FFGSI 1573
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + +A + Y + + NG +R ITVRDT+ DLP + NGA+ ++E+
Sbjct: 1217 LHVFAPRACSLTVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAA--SLEIS- 1273
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1274 ---YNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVEARMRHIPLAPGSDWRDLPNIEV 1330
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1331 RLKDGTTTKKLRYTHHDKKNGRSSTGALRGVCTCAGGKTCDSADRQFNTLIPWCLPHTGN 1390
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G H Q R+++VRECARSQGF D+Y+F
Sbjct: 1391 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHAEQHRVVSVRECARSQGFPDTYRF 1450
Query: 191 VGDI 194
G+I
Sbjct: 1451 FGNI 1454
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 125/244 (51%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + Y + + N + FR ITVRDT+ DLP + NGAS +E+
Sbjct: 1206 LHVFAPRACTLSVVVDEKKYVSNTTRTNSSLFRTITVRDTMSDLPEIRNGASA--LEIS- 1262
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DH+ K MS L R + IP PGSDWR LP+ +V
Sbjct: 1263 ---YNGEPQSWFQRQIRGSQYQPILRDHVCKDMSALVAARMRHIPLAPGSDWRDLPNMEV 1319
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1320 RLSDGTTSRKLRYTHHDKKNGRSGTGALRGVCCCSEGKQCDPADRQFGTLIPWCLPHTGN 1379
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1380 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRL 1439
Query: 191 VGDI 194
G+I
Sbjct: 1440 FGNI 1443
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 126/247 (51%), Gaps = 62/247 (25%)
Query: 1 MHVFT----GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTME 56
+HVF P + V R Y + + NG +R ITVRDT+ DLP + NGA+ +E
Sbjct: 1218 LHVFAPRACSPSVVVDEKR---YVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAA--LE 1272
Query: 57 VGFSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS 114
+ Y EP WFQ+ IRG +L DHI K MS L R + IP PGSDWR LP+
Sbjct: 1273 IS----YNGEPQSWFQRHIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPN 1328
Query: 115 EKVV-----------------------------------------------DLIPWCLPN 127
+V LIPWCLP+
Sbjct: 1329 IEVRLRDGTNTKKLRYTHADKKNGRSGTGALRGVCSCAEGKPCDPADRQFNTLIPWCLPH 1388
Query: 128 TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+
Sbjct: 1389 TGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDT 1448
Query: 188 YKFVGDI 194
Y+F G++
Sbjct: 1449 YRFFGNV 1455
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 126/244 (51%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNS-HYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + Y + + NG +R ITVRD++ DLP + NGAS +E+
Sbjct: 1180 LHVFAPRACSLSVVVDEKRYVSNVTRGNGGIYRTITVRDSMSDLPEIRNGASA--LEIS- 1236
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1237 ---YNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPLAPGSDWRDLPNIEV 1293
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1294 RLKDGTMTKKLRYTHTDKKNGRSSTGALRGVCTCAGGKPCDPADRQFNTLIPWCLPHTGN 1353
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1354 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1413
Query: 191 VGDI 194
G+I
Sbjct: 1414 FGNI 1417
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 115/217 (52%), Gaps = 55/217 (25%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLND 84
+ PFR ITVRDT+ DLP + NGAS +E+ Y EP WFQ+++RG +L D
Sbjct: 1336 SSCPFRTITVRDTMSDLPEIRNGASA--LEIS----YNGEPQSWFQRQLRGSQYQPILRD 1389
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLP------------------------------- 113
HI K MS L R + +P PGSDWR LP
Sbjct: 1390 HICKDMSALVAARMRNVPLAPGSDWRDLPNIEVRLSDGTMTRKLRYTYHDRKNGCSSTGA 1449
Query: 114 --------SEKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
S K D LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P P
Sbjct: 1450 LRGVCSCASGKACDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1509
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1510 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1546
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 126/244 (51%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLA-RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + + + + NG +R ITVRDT+ DLP + NGAS +E+
Sbjct: 1207 LHVFAPRACSLNVVVDDKKFVSNVTRGNGGIYRTITVRDTMSDLPEIRNGASA--LEIS- 1263
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1264 ---YNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPLAPGSDWRDLPNIEV 1320
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1321 RLRDGTMTKKLRYTHLDKKNGRSSTGALRGVCTCAGGTPCDPADRQFNTLIPWCLPHTGN 1380
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1381 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRF 1440
Query: 191 VGDI 194
G+I
Sbjct: 1441 FGNI 1444
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 125/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASAQEIS-- 1384
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1385 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1441 VRLSDGTMARKLRYTHHDKKNGCSSTGALRGVCSCAEGKACDSTARQFNTLIPWCLPHTG 1500
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1501 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1560
Query: 190 FVGDI 194
G+I
Sbjct: 1561 LFGNI 1565
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1334 LHVFAPRACQLSVVVDDRKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1390
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1391 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1446
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1447 VRLSDGTMARKLRYTYHDRKNGRSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHT 1506
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1507 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1566
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1567 RLFGNI 1572
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 125/244 (51%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + Y + + N + FR ITVRDT+ DLP + NGAS +E+
Sbjct: 1208 LHVFAPRACSLSVVVDEKKYVSNITRTNSSLFRTITVRDTMSDLPEIRNGASA--LEIS- 1264
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DH+ K MS L R + IP PGSDWR LP+ +V
Sbjct: 1265 ---YNGEPQSWFQRQIRGSQYQPILRDHVCKDMSALVAARMRHIPLAPGSDWRDLPNMEV 1321
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1322 RLSDGTTTRKLRYSHHDKKNGRSSTGALRGVCSCSEGKPCDPADRQFNTLIPWCLPHTGN 1381
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1382 RHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRL 1441
Query: 191 VGDI 194
G+I
Sbjct: 1442 FGNI 1445
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1298 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1354
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1355 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1410
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1411 VRLSDGTLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1470
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1471 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1530
Query: 190 FVGDI 194
G+I
Sbjct: 1531 LFGNI 1535
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1384
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1385 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1441 VRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1500
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1501 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1560
Query: 190 FVGDI 194
G+I
Sbjct: 1561 LFGNI 1565
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 124/245 (50%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1335 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASAPEIS-- 1391
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1392 ----YNGEPQSWFQRQLRGSHYQPILRDHICKDMSALVAARMRHIPLSPGSDWRDLPNIQ 1447
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1448 VRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTG 1507
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1508 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1567
Query: 190 FVGDI 194
G+I
Sbjct: 1568 LFGNI 1572
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 124/245 (50%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1336 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASAPEIS-- 1392
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1393 ----YNGEPQSWFQRQLRGSHYQPILRDHICKDMSALVAARMRHIPLSPGSDWRDLPNIQ 1448
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1449 VRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTG 1508
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1509 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1568
Query: 190 FVGDI 194
G+I
Sbjct: 1569 LFGNI 1573
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 124/245 (50%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1348 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASAPEIS-- 1404
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1405 ----YNGEPQSWFQRQLRGSHYQPILRDHICKDMSALVAARMRHIPLSPGSDWRDLPNIQ 1460
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1461 VRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTG 1520
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1521 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1580
Query: 190 FVGDI 194
G+I
Sbjct: 1581 LFGNI 1585
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1326 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1382
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1383 ----YNGEPQSWFQRQLRGTQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1438
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1439 VRLSDGTMARKLRYTHHDRKNGYSSNRALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1498
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1499 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1558
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1559 RLFGNI 1564
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 124/245 (50%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1217 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASAPEIS-- 1273
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1274 ----YNGEPQSWFQRQLRGSHYQPILRDHICKDMSALVAARMRHIPLSPGSDWRDLPNIQ 1329
Query: 114 --------------------------------------------SEKVVDLIPWCLPNTA 129
S + LIPWCLP+T
Sbjct: 1330 VRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTG 1389
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1390 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1449
Query: 190 FVGDI 194
G+I
Sbjct: 1450 LFGNI 1454
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1340 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1396
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1397 ----YNGEPQSWFQRQLRGTQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1452
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1453 VRLSDGTMARKLRYTHHDRKNGYSSNRALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1512
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1513 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1572
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1573 RLFGNI 1578
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1384
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1385 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1441 VRLSDGTLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1500
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1501 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1560
Query: 190 FVGDI 194
G+I
Sbjct: 1561 LFGNI 1565
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1384
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1385 ----YNREPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1441 VRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1500
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1501 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1560
Query: 190 FVGDI 194
G+I
Sbjct: 1561 LFGNI 1565
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 115/218 (52%), Gaps = 56/218 (25%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLND 84
+ PFR ITVRDT+ DLP + NGAS +E+ Y EP WFQ+++RG +L D
Sbjct: 1277 SSGPFRTITVRDTMSDLPEIRNGASA--LEIS----YNGEPQSWFQRQLRGSQYQPILRD 1330
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLP------------------------------- 113
HI K MS L R + IP PGSDWR LP
Sbjct: 1331 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGA 1390
Query: 114 ---------SEKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
+ K D LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P
Sbjct: 1391 LRGVCSCVEASKACDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPE 1450
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
PMG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1451 PMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1488
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGTQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1503
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1504 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1563
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1564 RLFGNI 1569
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1047 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1103
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1104 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1159
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1160 VRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1219
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1220 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1279
Query: 190 FVGDI 194
G+I
Sbjct: 1280 LFGNI 1284
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1399 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1455
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1456 ----YNGEPQSWFQRQLRGTQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1511
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1512 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1571
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1572 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1631
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1632 RLFGNI 1637
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 127/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF L V + + + V + NG +R ITVRDT+ DLP + NGA+ +E+
Sbjct: 1219 LHVFAPRACSLSVVVGEKRYVSNV-TRGNGGIYRTITVRDTMSDLPEIRNGAAA--LEIS 1275
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1276 ----YNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRYIPLAPGSDWRDLPNIE 1331
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1332 VRLKDGTLTKKLRYTHHDKKNGRSGTGALRGVCTCAGGKPCDPSDRQFNTLIPWCLPHTG 1391
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1392 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1451
Query: 190 FVGDI 194
F G+I
Sbjct: 1452 FFGNI 1456
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1347 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1403
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1404 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1459
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1460 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1519
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1520 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1579
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1580 RLFGNI 1585
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1347 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1403
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1404 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1459
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1460 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1519
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1520 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1579
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1580 RLFGNI 1585
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 127/249 (51%), Gaps = 62/249 (24%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1318 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1374
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1375 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1430
Query: 114 ----------------------------------------SEKVVD--------LIPWCL 125
S K D LIPWCL
Sbjct: 1431 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKACDPAARQFNTLIPWCL 1490
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
P+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF
Sbjct: 1491 PHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1550
Query: 186 DSYKFVGDI 194
D+Y+ G+I
Sbjct: 1551 DTYRLFGNI 1559
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 117/220 (53%), Gaps = 55/220 (25%)
Query: 24 STANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--V 81
S NG +R ITVRDT+ DLP + NGAS +E+ Y EP WFQ++IRG +
Sbjct: 963 SRGNGGIYRTITVRDTMSDLPEIRNGASA--LEIS----YNGEPQSWFQRQIRGTQYQPI 1016
Query: 82 LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV----------------------- 118
L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1017 LRDHICKDMSALVEGRMRHIPLAPGSDWRDLPNIEVRLRDGTMTKKLRYTHSDKKNGRSS 1076
Query: 119 ------------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+
Sbjct: 1077 TGALRGVCTCAGGTPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTN 1136
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
P PMG G HP Q R+++VRECARSQGF D+Y+F G+I
Sbjct: 1137 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNI 1176
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1503
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1504 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1563
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1564 RLFGNI 1569
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1503
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1504 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1563
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1564 RLFGNI 1569
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1256 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1312
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1313 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1368
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1369 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1428
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1429 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1488
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1489 RLFGNI 1494
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 255 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEIS-- 311
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 312 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 367
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 368 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 427
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 428 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 487
Query: 189 KFVGDI 194
+ G+I
Sbjct: 488 RLFGNI 493
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1347 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1403
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1404 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1459
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1460 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1519
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1520 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1579
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1580 RLFGNI 1585
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 127/249 (51%), Gaps = 62/249 (24%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1347 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1403
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1404 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1459
Query: 114 ----------------------------------------SEKVVD--------LIPWCL 125
S K D LIPWCL
Sbjct: 1460 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGASGKACDPAARQFNTLIPWCL 1519
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
P+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF
Sbjct: 1520 PHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1579
Query: 186 DSYKFVGDI 194
D+Y+ G+I
Sbjct: 1580 DTYRLFGNI 1588
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1226 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1282
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1283 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1338
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1339 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1398
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1399 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1458
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1459 RLFGNI 1464
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1346 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1402
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1403 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1458
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1459 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1518
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1519 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1578
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1579 RLFGNI 1584
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 115/217 (52%), Gaps = 55/217 (25%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLND 84
+ PFR ITVRDT+ DLP + NGAS +E+ Y EP WFQ+++RG +L D
Sbjct: 1362 SSGPFRTITVRDTMSDLPEIRNGASA--LEIS----YNGEPQSWFQRQLRGSQYQPILRD 1415
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-------------------------- 118
HI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1416 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGA 1475
Query: 119 ---------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P P
Sbjct: 1476 LRGVCSCVEGKPCGPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1535
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1536 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1572
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1393 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1449
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1450 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1505
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1506 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1565
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1566 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1625
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1626 RLFGNI 1631
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1226 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1282
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1283 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1338
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1339 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1398
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1399 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1458
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1459 RLFGNI 1464
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1393 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1449
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1450 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1505
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1506 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1565
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1566 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1625
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1626 RLFGNI 1631
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1505 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1561
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1562 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1617
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1618 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1677
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1678 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1737
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1738 RLFGNI 1743
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1317 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1373
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1374 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1429
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1430 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1489
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1490 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1549
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1550 RLFGNI 1555
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1503
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1504 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1563
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1564 RLFGNI 1569
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 127/249 (51%), Gaps = 62/249 (24%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 ----------------------------------------SEKVVD--------LIPWCL 125
S K D LIPWCL
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGASGKACDPAARQFNTLIPWCL 1503
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
P+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF
Sbjct: 1504 PHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1563
Query: 186 DSYKFVGDI 194
D+Y+ G+I
Sbjct: 1564 DTYRLFGNI 1572
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1331 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1387
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1388 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1443
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1444 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1503
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1504 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1563
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1564 RLFGNI 1569
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 995 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1051
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1052 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1107
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1108 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1167
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1168 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1227
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1228 RLFGNI 1233
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 126/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1384
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1385 ----YNGEPQSWFQRQLRGSQYQPTLRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1441 VRLSDGTLARKLRYNYHDKKNGCSSTGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTG 1500
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1501 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1560
Query: 190 FVGDI 194
G+I
Sbjct: 1561 LFGNI 1565
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 113/215 (52%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
AP+R ITVRDT+ DLP + NGA +E+ Y EP FQKKIRG+ +L DHI
Sbjct: 1352 APYRTITVRDTMSDLPTINNGAQ--KLEIS----YDGEPQSDFQKKIRGNQYQPILRDHI 1405
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K MS L R + IP PGSDWR LP+ V
Sbjct: 1406 CKDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALR 1465
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 1466 GVCSCAEGDACDPSDRQFSTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1525
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1526 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSI 1560
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 1291 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEI--- 1346
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1347 ---LYNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1403
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1404 VRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHT 1463
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1464 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1523
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1524 RLFGNI 1529
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1421 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1477
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1478 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1533
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1534 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 1593
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1594 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1653
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1654 RLFGNI 1659
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 127/249 (51%), Gaps = 62/249 (24%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1210 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1266
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1267 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1322
Query: 114 ----------------------------------------SEKVVD--------LIPWCL 125
S K D LIPWCL
Sbjct: 1323 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGGSSGKACDPAARQFNTLIPWCL 1382
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
P+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF
Sbjct: 1383 PHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1442
Query: 186 DSYKFVGDI 194
D+Y+ G+I
Sbjct: 1443 DTYRLFGNI 1451
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 113/218 (51%), Gaps = 56/218 (25%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLND 84
+ PFR ITVRDT+ DLP + NGAS + Y EP WFQ+++RG +L D
Sbjct: 1352 SSGPFRTITVRDTMSDLPEIRNGASAQDIS------YNGEPQSWFQRQLRGSQYQPILRD 1405
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-------------------------- 118
HI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1406 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSTGA 1465
Query: 119 ----------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P
Sbjct: 1466 LRGVCSCVEVGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPE 1525
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
PMG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1526 PMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1563
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 1325 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEI--- 1380
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1381 ---LYNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1437
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1438 VRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHT 1497
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1498 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1557
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1558 RLFGNI 1563
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 733 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 789
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 790 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 845
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 846 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 905
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 906 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 965
Query: 189 KFVGDI 194
+ G+I
Sbjct: 966 RLFGNI 971
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 115/226 (50%), Gaps = 57/226 (25%)
Query: 20 AAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM 79
A R + APFR ITVRDT+ DLP + NGAS + Y EP WFQ+++RG
Sbjct: 1334 ALFRPRLSSAPFRTITVRDTMSDLPEIRNGASAPEIA------YNGEPQSWFQRQLRGSH 1387
Query: 80 L--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-------------------- 117
L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 1388 YQPTLRDHICKDMSPLVAARMRHIPLAPGSDWRDLPNIEVHLTDGTLAKKLRYTHHDKKN 1447
Query: 118 -----------------------------VDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
LIPWCLP+T +HN W GL+GRL+W+G F
Sbjct: 1448 SCSSSGNLRGVCSCAEAAGRACDPTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFF 1507
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1508 STTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1553
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 687 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEIS-- 743
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 744 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 799
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 800 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHT 859
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 860 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 919
Query: 189 KFVGDI 194
+ G+I
Sbjct: 920 RLFGNI 925
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 127/246 (51%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 995 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1051
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1052 ----YNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1107
Query: 117 VV------------------------------------------------DLIPWCLPNT 128
V LIPWCLP+T
Sbjct: 1108 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACHPAARQFNTLIPWCLPHT 1167
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1168 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1227
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1228 RLFGNI 1233
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 1328 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEI--- 1383
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1384 ---LYNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1440
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1441 VRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHT 1500
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1501 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1560
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1561 RLFGNI 1566
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +
Sbjct: 1391 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEIL-- 1447
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1448 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1503
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1504 VRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHT 1563
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1564 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1623
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1624 RLFGNI 1629
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 112/215 (52%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
PFR ITVRDT+ DLP + NGAS + Y EP WFQ++IRG +L DHI
Sbjct: 1004 GPFRTITVRDTMSDLPEIRNGASALEIS------YNGEPQSWFQRQIRGSQYQPILRDHI 1057
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K MS L R + IP PGSDWR LP+ +V
Sbjct: 1058 CKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALR 1117
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 1118 GVCCCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1177
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1178 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1212
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 124/244 (50%), Gaps = 56/244 (22%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + Y + + N + FR ITVRDT+ DLP + NGAS +E+
Sbjct: 1206 LHVFAPRACTLSVVVDEKKYVSNTTRTNSSLFRTITVRDTMSDLPEIRNGASA--LEIS- 1262
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DH+ K MS L R + IP PGSDWR LP+ +V
Sbjct: 1263 ---YNGEPQSWFQRQIRGSQYQPILRDHVCKDMSALVAARMRHIPLAPGSDWRDLPNMEV 1319
Query: 118 V-----------------------------------------------DLIPWCLPNTAE 130
LIPWCLP+T
Sbjct: 1320 RLSDGTTSRKLRYTHHDKKNGRSGTGALRGVCCCSEGKQCDPADRQFGTLIPWCLPHTGN 1379
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+HN W GL+GRL+W+ F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1380 RHNHWAGLYGRLEWDSFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRL 1439
Query: 191 VGDI 194
G+I
Sbjct: 1440 FGNI 1443
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 125/246 (50%), Gaps = 59/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 1335 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASALEIL-- 1391
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1392 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1447
Query: 114 -------------------------------------SEKVVD--------LIPWCLPNT 128
+ K D LIPWCLP+T
Sbjct: 1448 VRLSDGTMARKLRYTYHDRRNGRSSSGALRGVCSCVEAGKACDPVARQFNTLIPWCLPHT 1507
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y
Sbjct: 1508 GNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTY 1567
Query: 189 KFVGDI 194
+ G+I
Sbjct: 1568 RLFGNI 1573
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 127/245 (51%), Gaps = 57/245 (23%)
Query: 1 MHVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF ++ + + + + + + PFR ITVRDT+ DLP V NGAS ++E+
Sbjct: 655 LHVFAPRACQLXXVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGAS--SLEI-- 710
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 711 --LYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEV 768
Query: 114 ------------------------------------SEKVVD--------LIPWCLPNTA 129
+ K D LIPWCLP+T
Sbjct: 769 RLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDSAARQFNTLIPWCLPHTG 828
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 829 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 888
Query: 190 FVGDI 194
G+I
Sbjct: 889 LFGNI 893
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 126/245 (51%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF L V + + + + T++ FR ITVRDT+ DLP + NGAS +E+
Sbjct: 1208 LHVFAPRACSLGVVVDEKKYVSNITRTSSSL-FRTITVRDTMSDLPEIRNGASA--LEIS 1264
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K +S L R + IP PGSDWR LP+ +
Sbjct: 1265 ----YNGEPQSWFQRQIRGSQYQPILRDHICKDLSALVAARMRHIPLAPGSDWRDLPNME 1320
Query: 117 V-----------------------------------------------VDLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1321 VRLSDGTTSRKLRYSHHDKKNGRSSNGALRGVCSCAEGKPCDPADRQFSTLIPWCLPHTG 1380
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1381 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1440
Query: 190 FVGDI 194
G+I
Sbjct: 1441 LFGNI 1445
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 123/236 (52%), Gaps = 56/236 (23%)
Query: 8 ELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEP 67
+L V + + + TA+ AP+R ITVRD + DLP + NGAS S Y+ E
Sbjct: 990 QLTVMVDEKKFTSNITRTAS-APYRTITVRDAMSDLPEIRNGASAA------ESSYEGEA 1042
Query: 68 VLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV------- 118
+ FQ++IRG+ +L DHI K MS L R + IP PGSDWR LP++++
Sbjct: 1043 ISHFQRQIRGNQYQPLLRDHICKEMSALVEARMRHIPLAPGSDWRDLPNKEIRLSDGTYS 1102
Query: 119 ----------------------------------------DLIPWCLPNTAEKHNQWKGL 138
LIPWCLP+T +HN W GL
Sbjct: 1103 KKLQYTHHDKKNEKGSSQRLRGVCSCAEGRPCEPADRQFNTLIPWCLPHTGNRHNHWAGL 1162
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1163 YGRLEWDGYFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGSI 1218
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 124/243 (51%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + Y + AP+R IT+RDT+ DLP++ NG S T +
Sbjct: 992 HVFSPRACQLSVMVDEKKYNSNTQWRQSAPYRTITIRDTMSDLPSIRNGHSATEIS---- 1047
Query: 61 SPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----- 113
Y EP +FQK IRG+ +L DHI K M+ L R + +P PGSDWR LP
Sbjct: 1048 --YDGEPRSYFQKIIRGNQYQPILRDHICKDMNALVEARMRHVPLAPGSDWRDLPNIVVR 1105
Query: 114 -----SEKVVD-------------------------------------LIPWCLPNTAEK 131
S K++ LIPWCLP+T +
Sbjct: 1106 LSDGSSSKLLQYTHEDKKNGTSSTGALRGVCSCAEGTACDQNDRQFNTLIPWCLPHTGNR 1165
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+F
Sbjct: 1166 HNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFY 1225
Query: 192 GDI 194
G I
Sbjct: 1226 GSI 1228
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 112/217 (51%), Gaps = 57/217 (26%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
APFR ITVRDT+ DLP + NGAS + Y EP WFQ+++RG + DHI
Sbjct: 1356 APFRTITVRDTMSDLPEIRNGASAPEIA------YNGEPQSWFQRQLRGSHYQPTVRDHI 1409
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLP--------------------------------- 113
K MS L R + IP PGSDWR LP
Sbjct: 1410 CKDMSPLVAARMRHIPLAPGSDWRDLPNIEVPLSDGTVAKKLRYSYQDKKNGCSSSGALR 1469
Query: 114 --------SEKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
+ K D LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P P
Sbjct: 1470 GVCSCAEGAGKACDTMARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1529
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1530 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1566
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 123/245 (50%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF L V + + + + T++ FR ITVRDT+ DLP + NGAS +
Sbjct: 89 LHVFAPRACSLGVIVDEKKYVSNITRTSSSL-FRTITVRDTMSDLPEIRNGASALEIS-- 145
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K +S L R + IP PGSDWR LP+ +
Sbjct: 146 ----YNGEPQSWFQRQIRGSQYQPILRDHICKDLSALVAARMRHIPLAPGSDWRDLPNME 201
Query: 117 V-----------------------------------------------VDLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 202 VRLSDGTTSRKLRYSHHDKKNGRSSNGALRGVCSCAEGKPCDPADRQFSTLIPWCLPHTG 261
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 262 NRHNHWAGLYGRLEWDGFLSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 321
Query: 190 FVGDI 194
G+I
Sbjct: 322 LFGNI 326
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 113/215 (52%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
AP+R ITVRD++ DLP + NGA +E+ Y EP FQKKIRG+ +L+DHI
Sbjct: 1353 APYRTITVRDSMSDLPTINNGAQ--KLEIS----YDGEPQSDFQKKIRGNQYQPILSDHI 1406
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K MS L R + IP PGSDWR LP+ V
Sbjct: 1407 CKDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALR 1466
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+T HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 1467 GVCSCAEGDACDPSDRQFSTLIPWCLPHTGNWHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1526
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1527 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSI 1561
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 113/215 (52%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
AP+R ITVRD++ DLP + NGA +E+ Y EP FQKKIRG+ +L+DHI
Sbjct: 1201 APYRTITVRDSMSDLPTINNGAQ--KLEIS----YDGEPQSDFQKKIRGNQYQPILSDHI 1254
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K MS L R + IP PGSDWR LP+ V
Sbjct: 1255 CKDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALR 1314
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+T HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 1315 GVCSCAEGDACDPSDRQFSTLIPWCLPHTGNWHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1374
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1375 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSI 1409
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 113/216 (52%), Gaps = 55/216 (25%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDH 85
AP+R I+VRD++ DLP + NGA +E+ Y EP FQKKIRG+ +L DH
Sbjct: 1357 SAPYRTISVRDSMSDLPTISNGAQ--KLEIS----YDGEPQSDFQKKIRGNQYQPILRDH 1410
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------------------- 114
+ K MS L R + IP PGSDWR LP+
Sbjct: 1411 MCKDMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGAL 1470
Query: 115 ----------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
+ LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PM
Sbjct: 1471 KGVCSCAEGEACDPSDRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1530
Query: 159 GMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1531 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSI 1566
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 113/216 (52%), Gaps = 55/216 (25%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDH 85
AP+R I+VRD++ DLP + NGA +E+ Y EP FQKKIRG+ +L DH
Sbjct: 1357 SAPYRTISVRDSMSDLPTISNGAQ--KLEIS----YDGEPQSDFQKKIRGNQYQPILRDH 1410
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------------------- 114
+ K MS L R + IP PGSDWR LP+
Sbjct: 1411 MCKDMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGAL 1470
Query: 115 ----------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
+ LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PM
Sbjct: 1471 KGVCSCAEGEACDPSDRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1530
Query: 159 GMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1531 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSI 1566
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 126/245 (51%), Gaps = 59/245 (24%)
Query: 2 HVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
HVF+ G +L V + R+ Y+ R + AP+R +TVRD + DLP + NGA +
Sbjct: 1118 HVFSRRGCQLSVAVGRDKFYSNCRWLLS-APYRTVTVRDAMSDLPEIPNGAKQEEIS--- 1173
Query: 60 SSPYKSEPVLWFQKKIRG----DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE 115
Y +P FQ+ +RG VL DHISK M+ L R IP +PGSDWR LP+
Sbjct: 1174 ---YGGDPQSHFQRWMRGTDSEQSSVLRDHISKEMAPLVEARIAFIPSKPGSDWRDLPNT 1230
Query: 116 KVV----------------------------------------------DLIPWCLPNTA 129
+V LIPWCLP+T
Sbjct: 1231 EVRLKDGVMTVKLRYTHEDKNGRSLSGAMRGVCSCAEGRQCDPLDKQHNTLIPWCLPHTG 1290
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1291 NRHNNWAGLYGRLEWDGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYR 1350
Query: 190 FVGDI 194
F G+I
Sbjct: 1351 FFGNI 1355
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 125/246 (50%), Gaps = 57/246 (23%)
Query: 1 MHVFTGPELKVKL-ARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF+ ++ + N Y AP+RAITV D + DLP + +G++ M
Sbjct: 1121 LHVFSKSTCQLTVDVDNVKYFTFTDVHESAPYRAITVYDALSDLPKIKSGSNEVVMR--- 1177
Query: 60 SSPYKSEPVLWFQKKIRG---DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-- 114
Y+++P+ FQ+K+R D L L DHI K + L R IP + GSDWR LP+
Sbjct: 1178 ---YENDPLTHFQRKMRSGMDDELALYDHICKDLGPLVEARMGLIPTKTGSDWRDLPNIV 1234
Query: 115 ---------------------------------------------EKVVDLIPWCLPNTA 129
++V LIPWCLP+TA
Sbjct: 1235 VRLSDGTCTTKLEYKYNDKKAGVSSTGAPRGICSCSEGKSCSLRDKQVNTLIPWCLPHTA 1294
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GR++W+G F T++T+P PMG G HP Q R+++VRECARSQGF DS++
Sbjct: 1295 NRHNHWAGLYGRIEWDGFFSTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFR 1354
Query: 190 FVGDIQ 195
F G IQ
Sbjct: 1355 FYGSIQ 1360
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 112/215 (52%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
AP+R ITVR + DLP + NG +E+ Y EP FQ+KIRG+ +L DHI
Sbjct: 1322 APYRTITVRAAMSDLPEIHNGHQ--KLEIS----YDGEPQSAFQRKIRGNQYQPILRDHI 1375
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K MS+L R + IP PGSDWR LP+ ++
Sbjct: 1376 CKEMSQLVATRMRHIPLAPGSDWRDLPNIQITLPDGNICRKLRYTHKDKKNGYSSNGSLR 1435
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 1436 GVCSCAEGEKCDTAYRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1495
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1496 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGTI 1530
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 123/243 (50%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ L N Y++ S + AP+R ITV+D + DLP + NG + M
Sbjct: 1367 HVFSKRACQLSVLVDNKKYSSNCSWIDSAPYRTITVKDAMFDLPEIKNGWNKEEM----- 1421
Query: 61 SPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---- 114
PY SEP+ FQ+K+RG VL DHI K M+ L R IP GSDWR LP+
Sbjct: 1422 -PYNSEPLSHFQRKMRGKQYQPVLRDHICKEMAPLVEGRMAHIPIASGSDWRDLPNITIR 1480
Query: 115 -------------------------------------------EKVVDLIPWCLPNTAEK 131
+ LIPWCLP+T +
Sbjct: 1481 LSDGTYSKKLEYPYDDKKAGKSSTGAYRGVCSCCNGKPCDPTDRQFNTLIPWCLPHTGNR 1540
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T++T+P PMG G HP + R+++VRECARSQGF DS++F
Sbjct: 1541 HNHWSGLYGRLEWDGFFSTTITNPEPMGKQGRVLHPVETRVVSVRECARSQGFPDSFRFY 1600
Query: 192 GDI 194
G I
Sbjct: 1601 GSI 1603
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 124/246 (50%), Gaps = 58/246 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF G +L V++ + + V+ ++ APFR I+VRD + DLP V NGA +
Sbjct: 993 LHVFAPRGMQLSVQVGDKRYNSCVQRMSS-APFRTISVRDAMSDLPEVKNGAKAEKIS-- 1049
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y E FQ+ IRG V DHI K + L R Q IP PG+DWR LP+ +
Sbjct: 1050 ----YSVEAQSHFQRMIRGHQHQPVCRDHICKDFNPLVHARMQHIPLYPGADWRDLPNIE 1105
Query: 117 VV-----------------------------------------------DLIPWCLPNTA 129
V LIPWCLP+T
Sbjct: 1106 VRLSDGSKCKKLCYTHRDKKNGRSPSGALRGVCQCADSGSCDAMDRQFNTLIPWCLPHTG 1165
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+Y+
Sbjct: 1166 NRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYR 1225
Query: 190 FVGDIQ 195
F G+IQ
Sbjct: 1226 FFGNIQ 1231
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 114/217 (52%), Gaps = 56/217 (25%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD--MLVLNDH 85
AP+RAITV+D + DLP + G+++ M Y EP+ FQ+K+RG L DH
Sbjct: 1162 SAPYRAITVKDALYDLPEIKCGSNIEEMS------YVGEPITHFQRKMRGKPYQSKLTDH 1215
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------------------- 114
I K MS L R IP GSDWR LP+
Sbjct: 1216 ICKEMSPLVEARMSYIPTTNGSDWRDLPNIVVQLSDGTYTKKLDYMYNDKRVGRSKTNAF 1275
Query: 115 ---------EKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
+++ D LIPWCLP+TA +HN WKGL+GR++W G F T++T+P P
Sbjct: 1276 RGVCRCSIRKQLCDPTDKQFNTLIPWCLPHTASRHNNWKGLYGRIEWSGFFSTTITNPEP 1335
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG G HP Q+R+++VRECARSQGF DSY+F G I
Sbjct: 1336 MGKQGRVLHPVQNRVVSVRECARSQGFLDSYRFFGTI 1372
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 125/242 (51%), Gaps = 55/242 (22%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSS 61
HVF+ ++ + N + AP+R ITVRD++ DLP + NG++V +M
Sbjct: 1177 HVFSPRACQLTVVVNDIKYEGSIRMDSAPYRTITVRDSMSDLPHIKNGSAVRSMN----- 1231
Query: 62 PYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE--KV 117
Y EP +Q+ +RG+ VL DHI K M+ L R + IP PGSDWR LP++ ++
Sbjct: 1232 -YNGEPHCHYQRLMRGNQHQPVLYDHICKEMNPLVAARMRFIPIGPGSDWRDLPNKCIRL 1290
Query: 118 VD---------------------------------------------LIPWCLPNTAEKH 132
D LIPWCLP+T +H
Sbjct: 1291 SDGTTAPKLQYTHHDKKNGRAKNKSLRGVCPCATGQPCDSSYRQYGTLIPWCLPHTGNRH 1350
Query: 133 NQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
N W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+++F G
Sbjct: 1351 NHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTFRFFG 1410
Query: 193 DI 194
I
Sbjct: 1411 TI 1412
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 122/245 (49%), Gaps = 58/245 (23%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+H F+ G L ++ ++ Y + AP+R ITV D + DLP + NG + M
Sbjct: 1035 LHTFSTRGGSLSAQVG-DTRYTNNIKWSTSAPYRTITVHDAMSDLPKIPNGHAKLEM--- 1090
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE- 115
PY EP+ FQ+ +RG V+ DHI K MS L R IP PGSDWR LP++
Sbjct: 1091 ---PYTGEPLTHFQRMMRGKDYQGVVRDHICKDMSPLVAARMALIPLIPGSDWRDLPNKP 1147
Query: 116 -KVVD---------------------------------------------LIPWCLPNTA 129
K+ D LIPWCLP+T
Sbjct: 1148 HKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGVCSCAEGRACDAMDRQFNTLIPWCLPHTG 1207
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GRL W+G F T+VT+P PMG G HP Q R+++VRECARSQGF DSY+
Sbjct: 1208 NRHNNWAGLYGRLCWDGFFSTTVTNPEPMGKQGRVLHPQQHRVVSVRECARSQGFPDSYR 1267
Query: 190 FVGDI 194
F G I
Sbjct: 1268 FFGSI 1272
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 123/243 (50%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + N Y++ AP+R I+VRD + DLP + NG + + G
Sbjct: 1166 HVFSKRACQLSVIVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNIRNGWNKEEIAYG-- 1223
Query: 61 SPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----- 113
EP+ FQ+KIR +L DHI K M+ L R IP GSDWR LP
Sbjct: 1224 ----DEPISHFQRKIRPKEPDAILRDHICKDMAPLVEARIAHIPTASGSDWRDLPNIAVR 1279
Query: 114 ----------------------------------SEKVVD--------LIPWCLPNTAEK 131
+ K+ D LIPWCLP+T ++
Sbjct: 1280 LSDGTYSKKLEYTHNDKKSGKSSTGALRGVCNCSAGKICDPMDRQYNTLIPWCLPHTGKR 1339
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HNQW GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 1340 HNQWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFY 1399
Query: 192 GDI 194
G+I
Sbjct: 1400 GNI 1402
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 115/228 (50%), Gaps = 55/228 (24%)
Query: 16 NSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI 75
N Y++ + APFR I+VRD + DLP + NG + M PY +EP+ FQ+K+
Sbjct: 1144 NRKYSSNCAWKESAPFRTISVRDAMSDLPPIKNGWNKEEM------PYGNEPMSHFQRKV 1197
Query: 76 RGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------- 114
RG +L DHI K M+ + R IP GSDWR LP+
Sbjct: 1198 RGKQYQPMLRDHICKEMAPIIEARIAHIPTASGSDWRDLPNIVLQLSDNTFANKLEYTYH 1257
Query: 115 ----------------------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG 146
++ LIPWCLP+T +HN W GL+GRL+W+G
Sbjct: 1258 DKRAGESSISALRGVCSCCTGRPCDPTDKQFNTLIPWCLPHTGNRHNHWSGLYGRLEWDG 1317
Query: 147 NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
F T+VT+P PMG G HP Q R+++VRECARSQGF D ++F G +
Sbjct: 1318 FFSTTVTNPEPMGKQGRVLHPVQTRVVSVRECARSQGFRDMFRFYGTV 1365
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 120/243 (49%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ L N Y++ + + APFR I+V+D + DLP + NG + M
Sbjct: 1088 HVFSKRACQLSVLVDNKKYSSNCNWIDSAPFRTISVKDAMFDLPEIKNGWNKEEMS---- 1143
Query: 61 SPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---- 114
Y +EP FQ+K+RG +L DHI K M+ L R IP GSDWR LP+
Sbjct: 1144 --YTNEPTTHFQRKMRGKQYQPLLRDHICKEMTPLVEARMAHIPIASGSDWRDLPNIAVR 1201
Query: 115 -------------------------------------------EKVVDLIPWCLPNTAEK 131
+ LIPWCLP+T +
Sbjct: 1202 LSDGTYCKQLEYTHDDKKAGRSSVGAYRGVCCCCTGKSCDPTDRQFNTLIPWCLPHTGNR 1261
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 1262 HNHWAGLYGRLEWNGYFSTTITNPEPMGKQGRVLHPVQTRVVSVRECARSQGFPDSFRFY 1321
Query: 192 GDI 194
G I
Sbjct: 1322 GTI 1324
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 121/243 (49%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + N Y++ AP+R I+VRD + DLP + NG + M
Sbjct: 1162 HVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNIRNGWNTEEM----- 1216
Query: 61 SPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----- 113
Y EP+ FQ+K+R +L DHI K M+ L R IP GSDWR LP
Sbjct: 1217 -AYSDEPISHFQRKVRPKEPDAILRDHICKDMAPLVEARIAHIPTASGSDWRDLPNIAVR 1275
Query: 114 ----------------------------------SEKVVD--------LIPWCLPNTAEK 131
+ K+ D LIPWCLP+T +
Sbjct: 1276 LSDGTYSKKLEYLYHDKKAGKSSIGAHRGVCSCCAGKMCDPIARQYNTLIPWCLPHTGRR 1335
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 1336 HNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFY 1395
Query: 192 GDI 194
G+I
Sbjct: 1396 GNI 1398
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 108/215 (50%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
P+R ITVRD + DLP + NGA + YK + FQ+ IRG +L DH+
Sbjct: 135 TPYRTITVRDAMSDLPEIKNGAKAEEIS------YKGDAQTHFQRLIRGHQHQPILRDHV 188
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLP--------------------------------- 113
K MS L R IP PGSDWR LP
Sbjct: 189 CKEMSPLVAARMTHIPLVPGSDWRDLPNLEIRLSDGSKAKKLLYTHPDKRNGKGSNGQRX 248
Query: 114 ------SEKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
+ +V D L PWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 249 XVXACATXRVCDPLDRQFXTLXPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 308
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G+I
Sbjct: 309 KXGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNI 343
>gi|296212502|ref|XP_002752890.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Callithrix
jacchus]
Length = 298
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 109/218 (50%), Gaps = 56/218 (25%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLND 84
+ PF ITVRDT+ DL V NGAS + Y EP WFQ+++ G +L D
Sbjct: 40 SSGPFWTITVRDTMSDLLEVQNGASALEIS------YNGEPQSWFQRQLWGTQYQPILRD 93
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLP------------------------------- 113
HI K MS L R Q IP PGSDWR LP
Sbjct: 94 HICKDMSALVAARMQHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHNRKNGRSSSRA 153
Query: 114 ---------SEKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
+ K D LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P
Sbjct: 154 LRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPE 213
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
PMG G HP Q R+++VRECA SQGF D+Y+ G+I
Sbjct: 214 PMGKQGRVLHPEQHRVVSVRECACSQGFPDTYRLFGNI 251
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 119/243 (48%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ L N Y+ S APFR I+VRD + DLP + NG + M
Sbjct: 1087 HVFSKRACQLSVLVDNKKYSTNCSWTESAPFRTISVRDALFDLPEIKNGWNKEEMS---- 1142
Query: 61 SPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---- 114
Y ++ + FQ++IRG +L DHI K M+ L R IP GSDWR LP+
Sbjct: 1143 --YTNDAISHFQRRIRGKQYQPLLRDHICKEMAPLVETRIAHIPVASGSDWRDLPNITVR 1200
Query: 115 -------------------------------------------EKVVDLIPWCLPNTAEK 131
++ LIPWCLP+T +
Sbjct: 1201 LSDGTYSKKLEYTHDDKKVGKSSTGAYRGVCSCCMGKQCDPTDKQFNTLIPWCLPHTGNR 1260
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 1261 HNHWAGLYGRLEWNGFFSTTITNPEPMGKQGRVLHPVQTRVVSVRECARSQGFPDSFRFY 1320
Query: 192 GDI 194
G I
Sbjct: 1321 GTI 1323
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 121/243 (49%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + N Y++ AP+R I+VRD + DLP + NG + M
Sbjct: 1161 HVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNIRNGWNTEEM----- 1215
Query: 61 SPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----- 113
Y EP+ FQ+K+R +L DHI K M+ L R IP GSDWR LP
Sbjct: 1216 -AYSDEPISHFQRKVRPKEPDAILRDHICKDMAPLVEARIAHIPTASGSDWRDLPNIAVR 1274
Query: 114 ----------------------------------SEKVVD--------LIPWCLPNTAEK 131
+ K+ D LIPWCLP+T +
Sbjct: 1275 LSDGTYSKKLEYLYHDKKAGKSSTGAHRGVCSCCAGKMCDPMARQYNTLIPWCLPHTGRR 1334
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF D+++F
Sbjct: 1335 HNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDTFRFY 1394
Query: 192 GDI 194
G+I
Sbjct: 1395 GNI 1397
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 124/243 (51%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + N Y++ AP+R I+VRD + DLP + NG + E+ +S
Sbjct: 1149 HVFSKRACQLSVIVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNIRNGWN--NEEIAYS 1206
Query: 61 SPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---- 114
EP+ FQ+K+R +L DHI K M+ L R IP GSDWR LP+
Sbjct: 1207 D----EPISHFQRKVRPKEPDAILRDHICKDMAPLVEARIAHIPTASGSDWRDLPNITVR 1262
Query: 115 -----------------------------------EKVVD--------LIPWCLPNTAEK 131
K+ D LIPWCLP+T ++
Sbjct: 1263 LSDGTYSKKLEYMYHDKKAGKSSTGALRGVCSCCMGKMCDPIARQYNTLIPWCLPHTGKR 1322
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 1323 HNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFY 1382
Query: 192 GDI 194
G+I
Sbjct: 1383 GNI 1385
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 108/216 (50%), Gaps = 55/216 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG--DMLVLNDHI 86
AP R T++D + DLP + NGA+ ++ G P +FQ+ IR + L DHI
Sbjct: 1124 APRRTCTIQDAMSDLPQICNGANRIEIDYG------CMPETYFQRLIRSRDESAKLRDHI 1177
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV---------------------------- 118
K M+ L R +IP PGSDWR LP+ V
Sbjct: 1178 CKNMAPLIQARMSRIPTTPGSDWRDLPNISVALSDGTKCKVLQYRYDDIKNGRSTSGALR 1237
Query: 119 -------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
LIPWCLP+TA +HN W GL+GR+ W+G F T+VTDP PMG
Sbjct: 1238 GVCACSAGGVCSVADKQENTLIPWCLPHTANRHNNWAGLYGRISWDGYFSTTVTDPEPMG 1297
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
G HP Q+R+++VRECARSQGF D+Y F G IQ
Sbjct: 1298 KQGRVLHPEQNRVVSVRECARSQGFPDTYLFAGSIQ 1333
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 108/215 (50%), Gaps = 55/215 (25%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHI 86
AP+R ITVRD + DLP + NG + M Y E +QK IRG +L DHI
Sbjct: 571 APYRTITVRDALSDLPEIRNGYNKLEMS------YDREAQNGYQKAIRGSQHQPILRDHI 624
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPS-------------------------------- 114
K MS L R + IP PGSDWR LP+
Sbjct: 625 CKEMSALVEGRMRHIPLAPGSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQLR 684
Query: 115 -------EKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
K D LIPWCLP+T +HN W GL+GR++W+G F T+VT+P PMG
Sbjct: 685 GVCACAMNKPCDPTDRQFNTLIPWCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPMG 744
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 745 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTI 779
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 108/216 (50%), Gaps = 55/216 (25%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM--LVLNDH 85
AP+R ITVRD + DLP + NG + M Y E +QK IRG +L DH
Sbjct: 1044 SAPYRTITVRDALSDLPEIRNGYNKLEMS------YDREAQNGYQKAIRGSQHQPILRDH 1097
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------------------- 114
I K MS L R + IP PGSDWR LP+
Sbjct: 1098 ICKEMSALVEGRMRHIPLAPGSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQL 1157
Query: 115 --------EKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
K D LIPWCLP+T +HN W GL+GR++W+G F T+VT+P PM
Sbjct: 1158 RGVCACAMNKPCDPTDRQFNTLIPWCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPM 1217
Query: 159 GMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1218 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTI 1253
>gi|380019136|ref|XP_003693470.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial [Apis
florea]
Length = 298
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 124/243 (51%), Gaps = 56/243 (23%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ + N Y++ AP+R I+VRD + DLP + NG + E+ +S
Sbjct: 20 HVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNIRNGWN--NEEIAYS 77
Query: 61 SPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----- 113
EP+ FQ+KIR +L DHI K M+ L R IP GSDWR LP
Sbjct: 78 D----EPISHFQRKIRPKEPDAILRDHICKDMAPLVEARIAHIPTASGSDWRDLPNIAVR 133
Query: 114 ----------------------------------SEKVVD--------LIPWCLPNTAEK 131
+ K+ D LIPWCLP+T ++
Sbjct: 134 LSDGTYSKKLEYMYHDKKVGKSSSGALRGVCSCCTGKMCDPIARQYNTLIPWCLPHTGKR 193
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
HN W GL+GRL+W+G F T++T+P PMG G HP Q R+++VRECARSQGF DS++F
Sbjct: 194 HNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFRFY 253
Query: 192 GDI 194
G+I
Sbjct: 254 GNI 256
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 107/218 (49%), Gaps = 55/218 (25%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLN 83
+ AP R ITVRD + DLP + NGA M Y + FQ+ IRG+ +L
Sbjct: 1090 STSAPLRTITVRDALSDLPEIPNGADRVVMN------YNEDCKTHFQRLIRGNQSQPILR 1143
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPS----------------------------- 114
DH K MS L R + IP GSDWR LP+
Sbjct: 1144 DHTCKYMSPLVEARIRHIPTTKGSDWRDLPNISMTLSDGTTIKQLKYMHHDRKNGKSPQG 1203
Query: 115 ------------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
+ LIPWCLP+TA +HN W GL+GRL+W+G F T+VT+P
Sbjct: 1204 YLRGVCACASGRRCDPLDRQYNTLIPWCLPHTANRHNHWSGLYGRLEWDGYFSTTVTNPE 1263
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
PMG G HP Q R+++VRECARSQGF DS++F G I
Sbjct: 1264 PMGKQGRVLHPEQTRVVSVRECARSQGFPDSFQFYGPI 1301
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 121/246 (49%), Gaps = 58/246 (23%)
Query: 1 MHVFTGPELKVKLA-RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF+ + + N Y AP++ T+RD + DLP++ +G + M G
Sbjct: 1071 LHVFSKSACNLSVVIDNKKYFPTYDWVESAPYKVTTIRDALSDLPSIKSGKNEDVMSYG- 1129
Query: 60 SSPYKSEPVLWFQKKIRG---DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-- 114
SEP+ FQ+K+R D L+L DHI K + L R IP GSDWR LP+
Sbjct: 1130 -----SEPLSHFQRKLRAGVSDSLLL-DHICKDLGPLVEARMAHIPTVSGSDWRDLPNIV 1183
Query: 115 ---------------------------------------------EKVVDLIPWCLPNTA 129
+ LIPWCLP+T
Sbjct: 1184 IPLSDGNHTNKLKYNYHDKKAGKSSTGALRGVCSCCTGKECNPLDRQDNTLIPWCLPHTG 1243
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+HN W GL+GR++W+G F T++T+P PMG G HP+Q R+++VRECARSQGF D+++
Sbjct: 1244 NRHNHWAGLYGRIEWDGFFSTTITNPEPMGKQGRVLHPDQTRVVSVRECARSQGFPDNFR 1303
Query: 190 FVGDIQ 195
F G+IQ
Sbjct: 1304 FYGNIQ 1309
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 106/217 (48%), Gaps = 55/217 (25%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG--DMLVLNDH 85
AP R T++D + DLP + NGA+ +E G S P FQ+ +R + L DH
Sbjct: 1166 SAPKRTCTIQDAMSDLPQICNGANKIEIEYG------SMPESHFQRLVRSNDENSKLRDH 1219
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--------------------------- 118
I K M+ L R +IP PGSDWR LP+ V
Sbjct: 1220 ICKNMAPLIQARISRIPTTPGSDWRDLPNISVTLSDGTKCKVLQYRYDDKRNGRSSSGAV 1279
Query: 119 --------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
LIPWCLP+T +HN W GL+GRL W G F T+VTDP PM
Sbjct: 1280 RGVCACASGRACSPLDKQENTLIPWCLPHTGNRHNHWAGLYGRLSWGGYFSTTVTDPEPM 1339
Query: 159 GMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
G G HP+Q R+++VRECARSQGF D+Y F G +Q
Sbjct: 1340 GKQGRVLHPDQHRVVSVRECARSQGFPDTYLFAGSVQ 1376
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 108/218 (49%), Gaps = 55/218 (25%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLN 83
+ AP R ITVRD++ DLP + NG M G EP+ FQ+ +RG+ +L
Sbjct: 124 VDSAPRRTITVRDSMSDLPEIRNGHKKEEMSYG------GEPLTHFQRLVRGNQYQPILR 177
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPS----------------------------- 114
DHI K M+ + R IP GSDWR LP+
Sbjct: 178 DHICKEMAPIIEARIANIPTGVGSDWRDLPNIVVRLSDGSYTKKLIYTHHDKKNGRSSTG 237
Query: 115 ------------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
++ LIPWCLP+T + N W GL+GRL+W+G F T+VT+P
Sbjct: 238 ALRGVCACATGKPCDPMDKQTNTLIPWCLPHTGNRXNHWAGLYGRLEWDGFFSTTVTNPE 297
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
PMG G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 298 PMGKQGRVLHPEQTRVVSVRECARSQGFPDTYRFFGSI 335
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 110/215 (51%), Gaps = 52/215 (24%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKS-EPVLWFQKKIRGDMLVLND 84
AP+R + VRD I DLPA+ + + M PY E FQ+K+RG+ L D
Sbjct: 965 TQSAPYRMLHVRDAIADLPAIEHDDNRPQM------PYDDDEGTSHFQRKMRGNQEELLD 1018
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPS------------------------------ 114
HI K ++ + R + IP + G+DWR LP+
Sbjct: 1019 HICKPIAPIVQTRIKLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPNR 1078
Query: 115 -------EKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
EK D LIPWCLP+TA++HN W G++GRLDW G F T+ T+P PMG
Sbjct: 1079 GVCACSVEKACDPNDRQSNTLIPWCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMG 1138
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP+Q+R+I+VRECARSQGF D KF G +
Sbjct: 1139 KQGRVIHPDQNRLISVRECARSQGFPDKTKFFGSV 1173
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Tribolium
castaneum]
Length = 1187
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 52/212 (24%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKS-EPVLWFQKKIRGDMLVLNDHIS 87
AP+R + VRD I DLPA+ + + M PY E FQ+K+RG+ L DHI
Sbjct: 950 APYRMLHVRDAIADLPAIEHDDNRPQM------PYDDDEGTSHFQRKMRGNQEELLDHIC 1003
Query: 88 KAMSELNLIRCQKIPKQPGSDWRVLPS--------------------------------- 114
K ++ + R + IP + G+DWR LP+
Sbjct: 1004 KPIAPIVQTRIKLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPNRGVC 1063
Query: 115 ----EKVVD--------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVG 162
EK D LIPWCLP+TA++HN W G++GRLDW G F T+ T+P PMG G
Sbjct: 1064 ACSVEKACDPNDRQSNTLIPWCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMGKQG 1123
Query: 163 TCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP+Q+R+I+VRECARSQGF D KF G +
Sbjct: 1124 RVIHPDQNRLISVRECARSQGFPDKTKFFGSV 1155
>gi|240979618|ref|XP_002403217.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215491328|gb|EEC00969.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 230
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 101/201 (50%), Gaps = 54/201 (26%)
Query: 42 DLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKI 101
DLP + NGA + PY +E + FQ+ +RG VL DH+ K M+ L R + I
Sbjct: 3 DLPEIRNGAKREEI------PYGAEALTPFQRTLRGGGAVLRDHVCKEMAPLVEARMRHI 56
Query: 102 PKQPGSDWRVLPSEKVV------------------------------------------- 118
P +PGSDWR LP+ V
Sbjct: 57 PLEPGSDWRDLPNAVVRLSDGVTFTRKLRYTHHDRKNGKSSTGALRGVCPCAEDAPCDPV 116
Query: 119 -----DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
LIPWCLP+T +HN W GL+GRLDW+G F T+VT+P PMG G HP Q R++
Sbjct: 117 CRQDNTLIPWCLPHTGNRHNHWAGLYGRLDWDGFFSTTVTNPEPMGKQGRVLHPEQHRVV 176
Query: 174 TVRECARSQGFSDSYKFVGDI 194
+VRECARSQGF D+Y+F G I
Sbjct: 177 SVRECARSQGFPDTYRFFGTI 197
>gi|147853570|emb|CAN82352.1| hypothetical protein VITISV_019438 [Vitis vinifera]
Length = 279
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 91/136 (66%), Gaps = 13/136 (9%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSS 61
HVF G ELKV ++YAAVRSTA G PFRAITVRD IGDLP +GNGA TTME
Sbjct: 50 HVFAGLELKV-----NNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTME----- 99
Query: 62 PYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLI 121
+ E W+Q+K RGDM +L DHISK M+ELNLIRC+KIPK G + + ++ L
Sbjct: 100 -FLREASSWYQRKFRGDMSILTDHISKKMNELNLIRCKKIPKFRGDVFLFIG--QIAKLT 156
Query: 122 PWCLPNTAEKHNQWKG 137
P L N A++ NQWKG
Sbjct: 157 PPWLLNLAKRXNQWKG 172
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 100/222 (45%), Gaps = 60/222 (27%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR------GDM 79
N AP R +TV D DLP + NGA + PY S P+ QK +R D
Sbjct: 980 VNSAPLRTLTVYDAWSDLPGISNGAYQERI------PYNSTPITHLQKLLRYPDNQYADS 1033
Query: 80 LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--------------------- 118
L DHI K MS L R IP GSDWR LP+ V
Sbjct: 1034 -TLCDHICKEMSSLVQARMALIPVCEGSDWRDLPNITVQLPEGLKTNTLLYTHHDIKNGY 1092
Query: 119 --------------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+IPWCLP+T +HN W GL+GRL W G T++
Sbjct: 1093 GPNGALRGVCTCASGDKCDPQDRQNNTIIPWCLPHTGNRHNNWAGLYGRLAWSGFCSTTI 1152
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T+P PMG G HP Q R+++VRECARSQGF DS+ F G I
Sbjct: 1153 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFKDSFIFCGSI 1194
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 116/247 (46%), Gaps = 62/247 (25%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR IT+RDT+ DLP + NGAS +
Sbjct: 1336 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITMRDTMSDLPEIQNGASAPEISYK 1394
Query: 59 FSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNL----IRCQKIPKQPGSDWRVLP- 113
+ + VL + R + L H +++ R + IP PGSDWR LP
Sbjct: 1395 WRAT-----VLVPEAAAR---VALPAHPQGPYPQVHERAGGCRMRHIPLSPGSDWRDLPN 1446
Query: 114 ----------------------------------------------SEKVVDLIPWCLPN 127
S + LIPWCLP+
Sbjct: 1447 IQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPH 1506
Query: 128 TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R+++VRECARSQGF D+
Sbjct: 1507 TGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDT 1566
Query: 188 YKFVGDI 194
Y+ G+I
Sbjct: 1567 YRLFGNI 1573
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 105/219 (47%), Gaps = 57/219 (26%)
Query: 23 RSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVL 82
++ + APFR +TVRD I DLP VG ++ FSS S +Q+ ++ +
Sbjct: 915 KTLSPSAPFRNVTVRDAIFDLPPVGKASNK-----NFSSSPTS-----YQRFLKTSSYSV 964
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV------------------------ 118
+DHI+K +S LN R + IP G DWR LP+ +V
Sbjct: 965 HDHITKEISPLNEARIRHIPASKGCDWRDLPNIQVRLRDGTLTNLLKYSYHDRKNGKSCC 1024
Query: 119 -----------------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDP 155
LIPW L +TA ++N W GL+GRLDW+G F T T+P
Sbjct: 1025 GLLRGVCSCASGKSCTPKARQNNTLIPWFLAHTANRNNNWSGLYGRLDWDGVFNTVTTNP 1084
Query: 156 HPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
P G HP +DRIIT+RE AR+QG DS+KF G +
Sbjct: 1085 EPSNQQGKVLHPEEDRIITIRESARAQGMPDSFKFYGAV 1123
>gi|322792107|gb|EFZ16179.1| hypothetical protein SINV_13041 [Solenopsis invicta]
Length = 269
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 81/161 (50%), Gaps = 47/161 (29%)
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-------------------------- 114
+L DH+ K MS L R IP GSDWR LP+
Sbjct: 9 ILMDHMCKGMSSLVEARMSYIPTTIGSDWRDLPNIVVKLSDGTFSKKLEYLHDDPKAGRN 68
Query: 115 ---------------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
++ LIPWCLP+T+ +HN WKGL+GRLDW G F T++T
Sbjct: 69 SQNGFRGVCSCCTGQPCDPTDKQFNTLIPWCLPHTSNRHNNWKGLYGRLDWNGFFKTTIT 128
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+P PMG G HP + R+++VRECARSQGF DSY+F G I
Sbjct: 129 NPEPMGKQGRVLHPVESRVVSVRECARSQGFPDSYRFFGTI 169
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 25 TANGAPFRAITVRDTIGDLPAVG-NGASVTTMEVGFSSP------------YKSEPVLWF 71
TA AP R I+V + I DLPA + E S P Y +EP F
Sbjct: 1307 TARSAPHRYISVSEAISDLPAFEYDEPEEPKDERSRSGPHKDKWIGSEVREYDAEPESDF 1366
Query: 72 QKKIR---GDMLVLNDHISKAMSELNLIRCQKIPKQPG-----------SDWRVLPSEKV 117
QK +R D + N H++K +E+N+ R +PK+P D R LP
Sbjct: 1367 QKAMRRRTKDKKLYN-HVTKTFTEMNVKRICNVPKRPAVGEPYPDNPPFYDHRDLPPS-- 1423
Query: 118 VDLIPWCLPN---TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
L PWCL N A KH W GL+GRLD++G F T++T+ PMG G HP Q R+IT
Sbjct: 1424 --LSPWCLSNPNSKAAKHRMWPGLYGRLDYQGYFQTALTEVCPMGKQGKVLHPYQSRVIT 1481
Query: 175 VRECARSQGFSDSYKFVGD 193
VRE ARSQGF D ++F +
Sbjct: 1482 VREHARSQGFPDDFRFYAE 1500
>gi|34784446|gb|AAH57461.1| Dnmt1 protein [Danio rerio]
Length = 200
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 47/152 (30%)
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVV------------------------------- 118
MS L R + IP PGSDWR LP+ +V
Sbjct: 1 MSALVAARIRNIPLAPGSDWRDLPNFEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 60
Query: 119 ----------------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVG 162
LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG G
Sbjct: 61 SCSEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQG 120
Query: 163 TCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP Q R+++V+ECARSQGF D+Y+F G++
Sbjct: 121 RVLHPEQHRVVSVKECARSQGFPDTYRFFGNV 152
>gi|348546083|ref|XP_003460508.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 183
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 113 PSEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
PS++ + LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R
Sbjct: 52 PSDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 111
Query: 172 IITVRECARSQGFSDSYKFVGDI 194
+++VRECARSQGF D+Y+F G+I
Sbjct: 112 VVSVRECARSQGFPDTYRFFGNI 134
>gi|307178879|gb|EFN67419.1| DNA (cytosine-5)-methyltransferase PliMCI [Camponotus floridanus]
Length = 1126
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 113 PSEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
P++K + LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q+R
Sbjct: 946 PTDKQFNTLIPWCLPHTGNRHNHWSGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPVQNR 1005
Query: 172 IITVRECARSQGFSDSYKFVGDI 194
+++VRECARSQGF DS++F G I
Sbjct: 1006 VVSVRECARSQGFPDSFRFYGTI 1028
>gi|348509437|ref|XP_003442255.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 234
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 113 PSEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
PS++ + LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG G HP Q R
Sbjct: 103 PSDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 162
Query: 172 IITVRECARSQGFSDSYKFVGDI 194
+++VRECARSQGF D+Y+F G+I
Sbjct: 163 VVSVRECARSQGFPDTYRFFGNI 185
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 92/208 (44%), Gaps = 56/208 (26%)
Query: 2 HVFTGPELKVK-LARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
HVF+ ++ L N Y+ S APFR I VRD + DLP + NG + M
Sbjct: 432 HVFSKRTCRLSVLVDNKKYSTNCSWTESAPFRTINVRDALFDLPEIKNGWNKEEMS---- 487
Query: 61 SPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---- 114
Y ++ + FQ++IRG +L DHI K M+ L R IP GSDWR LP+
Sbjct: 488 --YTNDAISHFQRRIRGKQYQPLLRDHICKEMTPLVETRIAHIPVASGSDWRDLPNIVVR 545
Query: 115 -------------------------------------------EKVVDLIPWCLPNTAEK 131
+ LIPWCLP+T +
Sbjct: 546 LSDGTCTKKLEYTHDDKKVGKSSTGAYRGVCSCCMGKQCDPTDRQFNTLIPWCLPHTGNR 605
Query: 132 HNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
HN W GL+GRL+W G F T++T+P PMG
Sbjct: 606 HNHWAGLYGRLEWSGFFSTTITNPEPMG 633
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 98/218 (44%), Gaps = 59/218 (27%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG------------- 77
R +TV D + DL V N V +PY S P FQ+ IRG
Sbjct: 1386 LRPVTVWDAVSDLAPVDNADGNDWRRV---APYGSAPQTPFQRAIRGAGVGVDVEAALGE 1442
Query: 78 ------------------------DMLVLNDHISKAMSELNLIRCQKIPKQ-PGSDWRVL 112
+++DH+ K M N R IPK PG+DW L
Sbjct: 1443 GAGGSDGGGGVAGAVSVALDESAASAALVSDHVPKRMQRENYTR--HIPKDTPGADWHSL 1500
Query: 113 ---------------PSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
P K L+P L +A++HN WKGL+GRL G FPT +T+P P
Sbjct: 1501 YDVVAADPSLELIHMPGGKTKPLVP-NLWKSADRHNGWKGLYGRLPRWGCFPTVITEPSP 1559
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
G VG FHP QDRI+TVRE AR+QGF DSY F G ++
Sbjct: 1560 SGKVGQVFHPLQDRIMTVREYARAQGFPDSYVFSGKVK 1597
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 96/207 (46%), Gaps = 52/207 (25%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
R + +RD DLP V A+ +T V KS P W D V+ DH + +
Sbjct: 779 LRPLQIRDAFDDLPDV---AANSTTAVHIKPTAKSLP--W-----SSDSSVVFDHCVRPV 828
Query: 91 SELNLIRCQKIPKQPGSDWRVLP------------------------------------- 113
LN R IP+ G+DWR LP
Sbjct: 829 DALNAARFAHIPRVRGADWRDLPNISVPLSDGSQTNILKYPFKGQIEGCVRKGVCACVEG 888
Query: 114 ----SEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPN 168
SE+ + LIPW LP+TA+ +N WKG++GRLD G F T +T+P P G HP+
Sbjct: 889 KKCKSERQKNTLIPWWLPHTAQSNNHWKGVYGRLDERGCFRTIITNPQPGVKQGRVLHPS 948
Query: 169 QDRIITVRECARSQGFSDSYKFVGDIQ 195
+DRI +VRECAR QGF D Y FVG I+
Sbjct: 949 KDRIASVRECARGQGFPDDYIFVGTIE 975
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 108/240 (45%), Gaps = 54/240 (22%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +E+
Sbjct: 1140 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASA--LEIS 1196
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP--- 113
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP
Sbjct: 1197 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1252
Query: 114 ------------------------SEKVVDLIPWCLPNTAEKHNQWK---------GLFG 140
S + + C+ A + GL
Sbjct: 1253 VRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGAARAASPCSHRDGGTGPWGLPA 1312
Query: 141 RLDWEGNFPTSV------TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
W G+ P + HP+ G HP Q R+++VRECARSQGF D+Y+ G+I
Sbjct: 1313 ARTW-GSLPRGLGHRALAESKHPLSPQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1371
>gi|395512633|ref|XP_003760540.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 137
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 113 PSEKVVD-LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
PS++ + LIPW LP+T ++N W GL+GRL+W+G F T+VTDP PMG G HP Q R
Sbjct: 14 PSDRQFNTLIPWSLPHTGNRNNHWAGLYGRLEWDGFFSTTVTDPEPMGKQGRVLHPEQHR 73
Query: 172 IITVRECARSQGFSDSYKFVG 192
+++VRECARSQGF D+Y+F G
Sbjct: 74 VVSVRECARSQGFPDTYRFFG 94
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 62/260 (23%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF P ++ + +S Y AP+R++TV+D + DLP T + +
Sbjct: 1411 LHVFPKPLCELGIVIDSKKYTQDTFWTESAPYRSVTVQDALIDLP-------TTKVAITE 1463
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---- 113
Y ++ F K +R +ML + +H+ K + L R +IP GSDWR LP
Sbjct: 1464 EMNYDAKSTSLFSKIMRLNMLEPTVFNHVCKDLGPLVECRISQIPLAVGSDWRNLPNIEM 1523
Query: 114 -------SEKVVD------------------------------------LIPWCLPNTAE 130
++K++ LIPW L ++A
Sbjct: 1524 QLKDESYAKKLIYNYDDVEAGKSSNGELRGVCSCASGERCDPRDRQHGCLIPWHLVHSAR 1583
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
K+ W G++ RL W+G F ++T+P P+G G HP Q R+++VRECAR+QGF D +
Sbjct: 1584 KNKHWAGIYSRLQWDGFFNGAITNPQPLGTQGPVLHPTQPRVVSVRECARAQGFPDEFVL 1643
Query: 191 -----VGDIQHIIGRLEMLF 205
+ ++ IIGR F
Sbjct: 1644 PQKIGIHNMYRIIGRASSPF 1663
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 56/206 (27%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
FR IT+R+ I DL + +T G + WF +K+R L++H+++ +
Sbjct: 642 FRTITLREAIMDL-----QNTKSTFSTGCT---------WFTRKMRAPKQ-LHNHVTRPL 686
Query: 91 SELNLIRCQKIPKQPGSDWRVLPSEKVV-------------------------------- 118
S N R ++IP PG+DWR LP+ V
Sbjct: 687 SLANQARIERIPYLPGADWRDLPNVSVKLPNGQVLHPLTYGEKGSVCPCGSGERCLKDVH 746
Query: 119 ---------DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQ 169
LIPW LP+TAE+++ W G +GRLDW G T +T P P G HP++
Sbjct: 747 KANGTRPAETLIPWFLPHTAERNSNWVGCYGRLDWNGYVGTLLTSPDPAHKQGRLLHPSR 806
Query: 170 DRIITVRECARSQGFSDSYKFVGDIQ 195
RI+TVRE AR QGF D++ F G I+
Sbjct: 807 QRILTVREYARIQGFPDTFIFQGAIE 832
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 108/247 (43%), Gaps = 55/247 (22%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANG-APFRAITVRDTIGDLPAVGNG---------- 49
MH F + + L H +T NG AP IT+ + + DLP
Sbjct: 999 MHAFEVLDSQYALP---HIKRYHTTQNGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDP 1055
Query: 50 -----------------ASVTTMEVGFS-SPYKSEPVLWFQKKIRGDML----------- 80
S T VG+ PY S P FQ+++R ++
Sbjct: 1056 YSSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRRLRTKLVPSDEPAEKTSL 1115
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCL--PNT-AEKHN 133
++ H+++ ++ R +P PG+D R LP E + PWCL PN+ AEKH
Sbjct: 1116 LTTKLVTAHVTRLFNKETTQRIVCVPMWPGADHRSLPKE----MRPWCLVDPNSQAEKHR 1171
Query: 134 QWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV-G 192
W GLFGRL E F T++TD P G G HP Q R+ TVRE AR+QGF D + F G
Sbjct: 1172 FWPGLFGRLGMEDFFSTALTDVQPCGKQGKVLHPTQRRVYTVRELARAQGFPDWFAFTDG 1231
Query: 193 DIQHIIG 199
D +G
Sbjct: 1232 DADSGLG 1238
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 104/240 (43%), Gaps = 54/240 (22%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANG-APFRAITVRDTIGDLPAVGNG---------- 49
MH F + + L H +T NG AP IT+ + + DLP
Sbjct: 999 MHAFEVLDSQYALP---HIKRYHTTQNGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDP 1055
Query: 50 -----------------ASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLND------- 84
S T VG+ PY S P FQ+++R ++ +D
Sbjct: 1056 YSSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRRLRTKLVPSDDPAEEPSL 1115
Query: 85 --------HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCL--PNT-AEKHN 133
H+++ ++ R +P PG+D R LP E + PWCL PN+ AEKH
Sbjct: 1116 LTTKLVTAHVTRLFNKETTQRIVCVPMWPGADHRSLPKE----MRPWCLVDPNSQAEKHR 1171
Query: 134 QWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
W GLFGRL E F T++TD P G G HP R+ TVRE AR+QGF D + F D
Sbjct: 1172 FWPGLFGRLGMEDFFSTALTDVQPCGKQGKVLHPTPRRVYTVRELARAQGFPDWFAFTDD 1231
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 40/198 (20%)
Query: 29 APFRAITVRDTIGDLPAVG-------------NGASVTTMEV------------------ 57
+PFRA+T+ D IGDLP + T E
Sbjct: 1005 SPFRAVTINDAIGDLPGFDWINPHLVYPSTSRDKTEKRTRETEHGILAFDAGYEDRRSQK 1064
Query: 58 --GFSSP--YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP 113
G+S P Y +P+ +QK IRG + ++ + + R +P +P +D+ LP
Sbjct: 1065 YPGYSKPMSYAHQPMTRYQKWIRGSQKKVKYQYTRRFGDGIIERVINVPLKPNADYHSLP 1124
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
+ + + + +++GL+GRLD E F T++T P G HP+Q RI+
Sbjct: 1125 KKLHMKMF-----DKKGAKERFRGLYGRLDGESQFKTALTTVAPNAKGGNLLHPSQKRIV 1179
Query: 174 TVRECARSQGFSDSYKFV 191
TVRECAR+QGF DSY+F+
Sbjct: 1180 TVRECARAQGFPDSYEFL 1197
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 49/217 (22%)
Query: 15 RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKK 74
R+ Y + + APFR IT+ + L A VTT SP S P+ W+ +
Sbjct: 486 RSMRYLCGPNPSAAAPFRTITLAEAFSGL------AEVTT------SPCPSGPMSWYARA 533
Query: 75 IRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE--------------KVVD- 119
I H S++ +N R +P PG+DWR +P+E + +D
Sbjct: 534 IAKSEGAPCFHESRSFEWINNERIASVPAVPGADWRDIPNEERTSPDGTVTLSKLRYIDE 593
Query: 120 ----------------------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
L+PW LP+ A N + GL+GR D G T +T+P P
Sbjct: 594 KLGIVCPCQLDKTAPHVKHGKTLVPWWLPHKASSKNGYAGLYGRNDMSGFLSTVLTNPMP 653
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G HP Q R+++ RE AR QGF DSY G +
Sbjct: 654 GNKQGRVLHPRQPRVLSARESARGQGFPDSYVLKGAL 690
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 57 VGFSSP--YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS 114
GF +P Y P+ FQ +RGD ++ H ++ S + R +P QPG++ LP
Sbjct: 1008 TGFPTPVAYPQPPLSRFQSWVRGDSDIVTYHYTRRWSPAVVERVVNVPIQPGANHADLP- 1066
Query: 115 EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
K++ + W P+ + K + + ++GR+D +G F T++T P G HP Q+RIIT
Sbjct: 1067 -KILQIPCWLNPDGSSK-SAYTTVYGRIDNDGCFMTALTTLAPNQKGGKVIHPTQNRIIT 1124
Query: 175 VRECARSQGFSDSYKFVG 192
+RE AR+QGF DSY+F+
Sbjct: 1125 IREAARAQGFPDSYQFLS 1142
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSE-PVLWFQKKIRGDMLVLNDHI 86
GA R +TV IGDLP + NG V +P+ S P +Q+++R L +H+
Sbjct: 222 GATKRPVTVWQAIGDLPEIENGGGVQI------APWASSHPTTTYQREMRRAAPQLYNHV 275
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG 146
A++ +NL R +P+ G +WR +P DL+P + + + + +GRL G
Sbjct: 276 CHALASVNLDRIVHVPE--GGNWRNVPR----DLLPAGMKRARLQDHTKR--YGRLSRGG 327
Query: 147 NFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T +T DPH G HP QDR I+VRE AR QGF DS++F GD
Sbjct: 328 FASTILTKCDPH----WGAYVHPTQDRTISVREAARLQGFPDSFRFAGD 372
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine max]
Length = 1143
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 94/197 (47%), Gaps = 40/197 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML----------- 80
+A ++D I DLPAV N + M PY++ P FQ+ IR
Sbjct: 853 KATVIQDAISDLPAVMNTETRDEM------PYQNPPETEFQRYIRSTKYEMTGSKSNGTT 906
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD-------LIPWC 124
+L DH + E + +R +IPK+ G+++R LP ++ VV L+P
Sbjct: 907 EKRPLLYDHRPYFLFEDDYLRVCQIPKRKGANFRDLPGVIVGADNVVRRHPTENPLLPSG 966
Query: 125 LPNTAE-----KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECA 179
P E +H + K F RL W+ N PT++T P V HP QDR++T+RE A
Sbjct: 967 KPLVPEYCFTFEHGKSKRPFARLWWDENLPTALTFPSCHNQV--VLHPEQDRVLTIREFA 1024
Query: 180 RSQGFSDSYKFVGDIQH 196
R QGF D Y+F G ++
Sbjct: 1025 RLQGFPDYYRFYGTVKE 1041
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML----------- 80
+A+ ++D + DLPAV N S M PY+ P FQ+ IR
Sbjct: 998 KAVVLQDALSDLPAVSNSESWEKM------PYEKPPETEFQRYIRSSKYEMTGCETDNRS 1051
Query: 81 --VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVDLIP----------W 123
L DH + E + +R IPK+ G+++R LP S+ VV P
Sbjct: 1052 TDTLYDHQPHLLGEDDHLRVCNIPKRKGANFRDLPGVIVGSDNVVRRDPANEVLLPSGKL 1111
Query: 124 CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+P+ A Q + FGRL W+ PT VT P V HP QDR++T+RE AR
Sbjct: 1112 MVPDYAISFEQGRSKRPFGRLWWDETVPTVVTFPSCHSSVA--LHPEQDRVLTIREYARL 1169
Query: 182 QGFSDSYKFVGDIQH 196
QGF D YKF G ++
Sbjct: 1170 QGFPDYYKFSGSVKE 1184
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 1 MHVF-TGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF T L + N + + APFR ITV D++ DLP + NGAS+ +
Sbjct: 543 LHVFSTRSSLLSAVIDNKRFVSNVKRLTSAPFRTITVYDSLSDLPTIKNGASLEEIS--- 599
Query: 60 SSPYKSEPVLWFQKKIRG--DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y+ EP WFQ++IRG VL DHI K M+ L + R + IP PGSDWR LP+ +V
Sbjct: 600 ---YEGEPKTWFQRQIRGPRHQQVLKDHICKTMNALVMARIKLIPLVPGSDWRDLPNIQV 656
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Query: 3 VFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSP 62
VF G + V + SH PF +T++D IGDLPA+ NG E +
Sbjct: 168 VFIGNRVGVPI---SHPEPTHGPGRSMPF--VTIKDAIGDLPALENG------EAKPDAA 216
Query: 63 YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIP 122
Y +Q+++RG+ V+ +H + + ++N+ R IP PG WR +P DL+P
Sbjct: 217 YLDGKPTSYQRQMRGNATVITNHAAPRLGQVNMDRLPHIP--PGGSWRDIP----FDLLP 270
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECAR 180
+ A++ + K +GR+ W+G T +T D H G HP QDR I+VRE AR
Sbjct: 271 AGM-KRAKRSDHTK-RYGRMTWDGLSCTVLTKCDIH----WGAYIHPEQDRAISVREAAR 324
Query: 181 SQGFSDSYKFVG 192
Q F D ++F G
Sbjct: 325 LQAFPDWFEFHG 336
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DML-------- 80
+A+ + D I DLP V N + M Y+ P FQK IR +M+
Sbjct: 601 KALVLGDAIADLPPVSNNETREQMS------YRRPPETEFQKYIRATKWEMMGSACKGTR 654
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKVVDL 120
VL DH+ ++E + +R +IPK+ G+++R LP +E +
Sbjct: 655 KAEKSVLYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTEMELPS 714
Query: 121 IPWCLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A ++ K F RL W+ PT +T P P HP QDR++TVRE
Sbjct: 715 GKQMVPDYALNFSEGKSTKPFARLWWDETVPTVLTKPDPH--CQAYLHPEQDRVLTVRES 772
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YKF G ++
Sbjct: 773 ARLQGFPDYYKFCGQVKE 790
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP V NGAS +E+
Sbjct: 1255 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASA--LEIS 1311
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 1312 ----YNGEPQSWFQRQLRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIE 1367
Query: 117 V 117
V
Sbjct: 1368 V 1368
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DML-------- 80
+A+ + D I DLP V N + M Y+ P FQK IR +M+
Sbjct: 1052 KALVLGDAIADLPPVSNNETREQMS------YRRPPETEFQKYIRATKWEMMGSACKGTR 1105
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKVVDL 120
VL DH+ ++E + +R +IPK+ G+++R LP +E +
Sbjct: 1106 KAEKSVLYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTEMELPS 1165
Query: 121 IPWCLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A ++ K F RL W+ PT +T P P HP QDR++TVRE
Sbjct: 1166 GKQMVPDYALNFSEGKSTKPFARLWWDETVPTVLTKPDPH--CQAYLHPEQDRVLTVRES 1223
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YKF G ++
Sbjct: 1224 ARLQGFPDYYKFCGQVKE 1241
>gi|215260081|gb|ACJ64503.1| DNA-(cytosine-5)-methyltransferase [Sebastiscus marmoratus]
Length = 211
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 1 MHVFTGPELKVKLARNSH-YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGF 59
+HVF + + + Y + + NG +R ITVRDT+ DLP + NGAS G
Sbjct: 42 LHVFAPRACSLNVVVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAS------GL 95
Query: 60 SSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV 117
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 96 EISYNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPLAPGSDWRDLPNLEV 155
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 22/178 (12%)
Query: 17 SHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR 76
SH PF +RD IGDLP + NG + + + P K +Q+++R
Sbjct: 179 SHPEPTHGPGRANPF--TKIRDAIGDLPPLDNGENPGRVAYADARPSK------YQRQMR 230
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK 136
G+ + + +H + + ++N+ R IP PG WR +P DL+P + A++ + K
Sbjct: 231 GNAITVGNHAAPRLGKVNMDRLPYIP--PGGSWRDIPH----DLLPEGM-KRAKRSDHTK 283
Query: 137 GLFGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+GR+ W+G T +T D H G HP QDR I+VRE AR Q F D ++F G
Sbjct: 284 -RYGRMTWDGLSCTVLTKCDIH----WGAYIHPEQDRAISVREAARLQAFPDWFEFAG 336
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1151
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 9 LKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVG-----------------NGAS 51
L++K V++ APFR+ T+ D IGDLP
Sbjct: 895 LEIKFTNGMVIRPVQTNGRSAPFRSTTIEDAIGDLPRFDWKNPQKLEKTPLPGTRQREDE 954
Query: 52 VTTME-------VGFSS--PYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIP 102
V T++ VG + Y S P FQ K R HI++ ++E + R + IP
Sbjct: 955 VLTLDCDPDKGFVGLTGRMEYFSPPRTSFQFKCRERPTSNLQHINRVLNEGTVERVRNIP 1014
Query: 103 KQPGSDWRVLPSEKVVDLIPWCLPNTAE---KHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
+P +D+R SE+ L W + A K GL+GRL+ +G F T+VT+ P
Sbjct: 1015 LEPRADYR---SEENPKLWEWQFSDRASSIAKKGFRGGLYGRLNKDGFFQTTVTNVEPTA 1071
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQ 195
HP RI+TVRE ARSQGF D + V GDI+
Sbjct: 1072 KQSRVLHPWCHRILTVRELARSQGFPDWFVCVSETGDIK 1110
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 46/201 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--------------- 76
+A+ +RD I DLPAV N T E+ + P ++E FQK IR
Sbjct: 493 KAVVLRDAISDLPAVTNYE--TRDEMLYGKPPETE----FQKYIRSTKDAMAGSSSSGIT 546
Query: 77 -GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVV--- 118
G +L DH ++E N +R +IP++ G+++R L P+ K +
Sbjct: 547 KGYNSILYDHRPYPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLP 606
Query: 119 ---DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITV 175
L+P C+ + + + K F RL W+ PT +T P+ HP QDR++T+
Sbjct: 607 SGHPLVPDCV--FSYEQGKSKRPFARLWWDETVPTVLTFPYLRNQ--AILHPEQDRVLTI 662
Query: 176 RECARSQGFSDSYKFVGDIQH 196
RECAR QGF D Y+F G ++
Sbjct: 663 RECARLQGFPDYYRFRGTVKE 683
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 46/201 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--------------- 76
+A+ +RD I DLPAV N T E+ + P ++E FQK IR
Sbjct: 1553 KAVVLRDAISDLPAVTNYE--TRDEMLYGKPPETE----FQKYIRSTKDAMAGSSSSGIT 1606
Query: 77 -GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVV--- 118
G +L DH ++E N +R +IP++ G+++R L P+ K +
Sbjct: 1607 KGYNSILYDHRPYPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLP 1666
Query: 119 ---DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITV 175
L+P C+ + + + K F RL W+ PT +T P+ HP QDR++T+
Sbjct: 1667 SGHPLVPDCV--FSYEQGKSKRPFARLWWDETVPTVLTFPYLRNQA--ILHPEQDRVLTI 1722
Query: 176 RECARSQGFSDSYKFVGDIQH 196
RECAR QGF D Y+F G ++
Sbjct: 1723 RECARLQGFPDYYRFRGTVKE 1743
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + +G P+R ITVRDT+ DLP + NGAS +
Sbjct: 1327 LHVFAPRACQLSVVVDDKKFVSNITRLTSG-PYRTITVRDTMSDLPEIQNGASAPEIS-- 1383
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++R +L DHI K MS L R + IP+ PGSDWR LP+ +
Sbjct: 1384 ----YSGEPQSWFQRQLRDSAYQPILRDHICKDMSPLVAARMKNIPRSPGSDWRDLPNIE 1439
Query: 117 VV 118
V+
Sbjct: 1440 VL 1441
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 21/163 (12%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPY-KSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+V D I D+P + +G ++ + SPY KSE +QK +R + +H + ++
Sbjct: 245 SVWDAISDMPKIESGEK--NEKIKYGSPYPKSE----YQKILRNGSDYVYNHNCNNLGQI 298
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + IP+ G WR +P E L+P L A + + K +GRLD G T +T
Sbjct: 299 NLDRLKHIPQ--GGSWRDIPFE----LLPAGL-KRARRSDHTK-RYGRLDPNGLCSTILT 350
Query: 154 --DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
DPH G+ FHP QDR+I+VRE AR Q F DSY F G +
Sbjct: 351 KCDPH----WGSFFHPTQDRVISVREAARIQSFPDSYHFTGSV 389
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF L V + + + V + NG +R ITVRDT+ DLP + NGA+ +
Sbjct: 640 LHVFAPRACSLSVVVGEKRYVSNV-TRGNGGIYRTITVRDTMSDLPEIRNGAAALEIS-- 696
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ++IRG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 697 ----YNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRYIPLAPGSDWRDLPNIE 752
Query: 117 V 117
V
Sbjct: 753 V 753
>gi|171472516|dbj|BAG15984.1| DNA methyltransferase 1 [Meriones unguiculatus]
Length = 196
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR ITVRDT+ DLP + NGAS +
Sbjct: 31 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASAPEIS-- 87
Query: 59 FSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
Y EP WFQ+++RG +L DHI K MS L R + IP PGSDWR LP+ +
Sbjct: 88 ----YNGEPQSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIE 143
Query: 117 V 117
V
Sbjct: 144 V 144
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD------------- 78
+A+ + D + DLP SVT +E Y P FQ+ IR
Sbjct: 538 KALVIEDALSDLP------SVTLLETRDQLSYGKAPQTEFQRYIRASKSEIMCSKDYDAK 591
Query: 79 ---MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-------------EKVVDLIP 122
VL DH S +S+ N R +IP++ G+ +R LP K ++L+P
Sbjct: 592 KSRTSVLYDHCSLQLSKENYSRICQIPRRKGACFRDLPGVIVLPDNSTQRDPSKEMELLP 651
Query: 123 W---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+PN + K L FGRL W+ PT +T P HP QDR++TVRE
Sbjct: 652 SGKPLVPNFCFTYENGKSLRPFGRLWWDETVPTVLTTAGPH--FQAILHPEQDRVLTVRE 709
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+F G I+
Sbjct: 710 NARLQGFPDFYRFSGTIKE 728
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--------------- 76
RA+ + D I DLP VGN M PY P FQ IR
Sbjct: 675 RALLLEDAISDLPQVGNNEMRDEM------PYGRPPRTEFQHFIRLTREELVNSASGAGR 728
Query: 77 -GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
+L DH ++E + +R +IPK+ G+++R LP KV +++ W
Sbjct: 729 LSQKAILFDHRPLQLNEDDYLRVCRIPKKKGANFRDLPGVKVGPDNVVEWDPEIERVLLP 788
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P HP QDR++++RE
Sbjct: 789 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQ--ALLHPEQDRVLSIRE 846
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G ++
Sbjct: 847 NARLQGFPDFYRLRGPVKE 865
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora B]
Length = 1248
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 94/224 (41%), Gaps = 44/224 (19%)
Query: 9 LKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAV---------------GNGASVT 53
L++KL + AAVR+ A APF +++ D IGDLP AS+
Sbjct: 982 LEIKLTDDEPAAAVRTAAGVAPFSFVSIEDAIGDLPRFDWENPKKLEARQGGRSRSASMR 1041
Query: 54 TME----------------------VGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
E G + Y SEP FQ K R + H ++ +
Sbjct: 1042 ASEEPAPERQVREVACRSDKPFCGFAGSNVEYFSEPRTTFQVKSREKPTMDLQHYTRVLK 1101
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCL--PNTAEKHNQWK-GLFGRLDWEGNF 148
+ R IP + +D+R LP V L W P++A N + GL+GRL F
Sbjct: 1102 PETVERVINIPLRAKADYRSLP----VYLHEWQFADPSSALARNGFPPGLYGRLAPNECF 1157
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T+VT+ P HP R+ITVRE ARSQGF D + F
Sbjct: 1158 HTTVTNVEPTAKQSWVLHPWCKRVITVRELARSQGFPDHFVFYA 1201
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFS 60
MHVF PELK+ L +YAA +STA GAPFRAITVRDTIGDLP V NGAS +E
Sbjct: 177 MHVFASPELKITLPDGKYYAAAKSTAAGAPFRAITVRDTIGDLPKVENGASKLILE---- 232
Query: 61 SPYKSEPVLWFQKKIRG 77
Y EP WFQKKIRG
Sbjct: 233 --YGGEPTSWFQKKIRG 247
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 20 AAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM 79
A VR G P +++RD I DL + + T + P +QK R D
Sbjct: 1169 ANVRKIVAG-PLPPVSLRDVISDLIPFEDSSESTAEYLP--------PKTVYQKLYRKDS 1219
Query: 80 LVLNDHISKAMSELN--LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQW-- 135
DHIS++ E+ LI+C +P+ PG ++R DL P E + +
Sbjct: 1220 DTCIDHISQSYGEVTSALIKC--LPRYPGCNFR--------DLAESARPLLKEGYLTYRD 1269
Query: 136 --KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
K + RL W + PT VT +P M HPNQ R+I+VRE AR QGF D + F G
Sbjct: 1270 FSKNILARLQWSKSCPTLVTHLNPYSM--KVIHPNQHRVISVREAARCQGFPDDFIFTGS 1327
Query: 194 I 194
I
Sbjct: 1328 I 1328
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-----LVLNDHI 86
R + ++D I DLP V N M PY EP FQ IR VL DH
Sbjct: 318 RELFLKDAISDLPPVENDEPTDEM------PYIDEPKSAFQHFIRSRRNGTLGSVLYDHR 371
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-----VDLIPWC-----------LPNTAE 130
++E + R +IPK+ G+++R LP +V V+L P +P+ A
Sbjct: 372 PLRLNEDDYQRVCQIPKRKGANFRDLPGVRVRANNTVELDPDVERVKVASGKPLVPDYAI 431
Query: 131 KHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+ FGRL W+ PT VT P V HP QDR++T+RE AR QGF D Y
Sbjct: 432 TFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQV--ILHPEQDRVLTIRENARLQGFPDYY 489
Query: 189 KFVGDIQH 196
K G I+
Sbjct: 490 KLTGPIKE 497
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 20/167 (11%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ TV D + DLP + +G+ T M Y++ P +QK +R + + +H +
Sbjct: 217 KQTTVWDALSDLPPIESGSVNTLMN------YEAPPQGEYQKYLRKNSDKVTNHSCNGLG 270
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+NL R + IP+ G WR +P D++P L A + + K +GRL + T
Sbjct: 271 PVNLERLKHIPQ--GGSWRDIP----FDMLPKGL-QRARRSDHTK-RYGRLSPDSLCSTI 322
Query: 152 VT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
+T DPH G+ FHP QDR+I+VRE AR Q F D Y F+G +Q
Sbjct: 323 LTKCDPH----WGSFFHPIQDRVISVREAARIQSFPDDYSFLGSLQE 365
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 2 HVFTGPE-LKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVG------NG----A 50
H P+ L ++ V + APFRA+ +RD I DL A NG
Sbjct: 993 HAVLNPDALSIRFPNGVEINPVPTGDGTAPFRAVCIRDAIDDLVAFDWKDPGKNGMKPRK 1052
Query: 51 SVTTMEVGFSSPYKSEPVLW-------FQKKIRGDMLVLNDHISKAMSELNLIRCQKIPK 103
V ++E PY P + +QK R H ++A + R +P
Sbjct: 1053 GVFSIECDPKKPYCGPPGDYARPPKNSYQKACRTKPTTQLQHYTRAFKHAVVSRITNVPL 1112
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQW---KGLFGRLDWEGNFPTSVTDPHPMGM 160
+ +D+R LP E W N A + G++GRLD + F T+VT+ P
Sbjct: 1113 KSRADYRFLPDEHS----EWQFRNPASATARLGFKPGMYGRLDEKEWFHTTVTNVDPTAK 1168
Query: 161 VGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
HP RI T+RE ARSQGF D + F+
Sbjct: 1169 QSYVLHPKYRRIFTIRELARSQGFPDWFTFIA 1200
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 23/163 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSP-YKSEPVLWFQKKIR-GDMLVLNDHISKAMS 91
++VRD I DLPA+ NG E+G Y+S P FQ +R G VLN H + +
Sbjct: 153 VSVRDAIDDLPALANG------EIGKERKNYRSGPQNDFQVAMRNGSDGVLN-HEAPRLG 205
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E+N+ R IP PG +W +P DL+P + A + + K +GR+ +G T
Sbjct: 206 EINIKRMSFIP--PGGNWTDIPE----DLLPRGM-RRARRSDHTK-RYGRVAPDGLASTI 257
Query: 152 VT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T DPH G FH QDR TVRE AR Q F DSY+FVG
Sbjct: 258 LTKCDPH----WGAYFHYEQDRCFTVREAARIQTFPDSYRFVG 296
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DML-------- 80
+A ++D I DLP V TT E Y+ P FQ+ IR +M
Sbjct: 487 KAAVLQDAISDLPPV------TTHETREEMAYEKPPETEFQRFIRSTEHEMTGSSQRGTT 540
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVDLIPW-------- 123
+L+DH A++E + R IPK+ G+++R LP ++ VV P
Sbjct: 541 QMNNLLSDHRPYALTEEDCARVCLIPKRKGANFRDLPGILVGNDNVVRRDPTKEQVLLPS 600
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDP--HPMGMVGTCFHPNQDRIITVR 176
+P+ A Q K + RL W+ PT VT P H M+ HP QDR +T+R
Sbjct: 601 GKPLVPDFAFTFEQGKSKRPYARLWWDETVPTVVTYPSIHSQAML----HPEQDRALTIR 656
Query: 177 ECARSQGFSDSYKFVGDIQH 196
ECAR QGF D Y+F G ++
Sbjct: 657 ECARLQGFPDYYRFSGTVKE 676
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 29 APFRAITVRDTIGDLPAVG-----------------NGASVTTMEVGFSSP-------YK 64
AP +TV D I DLPA G + +G +P Y
Sbjct: 958 APHNPVTVGDAISDLPAFDWRIKVPGEDRQARRQRELGIPTVDVPLGGKAPVGDNCSLYA 1017
Query: 65 SEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIP 122
P+ FQ+++R + ++ +H+++ ++R +IP +P ++ LP E +
Sbjct: 1018 YGPITEFQREVRRYVKGNIVKNHVTRQWGSQTMLRLARIPMRPQANHNDLPLEHDM---- 1073
Query: 123 WCLPNT-AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
CL N A K N + + RLD++ F T +T+ P G G HP Q RI+TVRE AR+
Sbjct: 1074 ACLRNQRASKSNFYPNRYHRLDFKEQFQTCLTNVDPGGENGKILHPTQRRILTVREFARA 1133
Query: 182 QGFSDSY 188
QGF D++
Sbjct: 1134 QGFLDTF 1140
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 92/203 (45%), Gaps = 35/203 (17%)
Query: 17 SHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR 76
++ A++S A F ++D I DLP V N M PY EP FQ IR
Sbjct: 495 AYDEALKSRAKERTF----LKDAISDLPPVENDEPRDEM------PYIDEPKSAFQHFIR 544
Query: 77 GDM-----LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-----VDLIPWC-- 124
VL DH ++E + R +IPK+ G+++R LP +V V+L P
Sbjct: 545 SRRDGALGSVLYDHRPLRLNEDDYERVCQIPKRKGANFRDLPGVRVRANNTVELDPDVER 604
Query: 125 ---------LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
+P+ A + FGRL W+ PT VT P V HP QDR++
Sbjct: 605 VKVASGKPLVPDYAITFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQV--ILHPEQDRVL 662
Query: 174 TVRECARSQGFSDSYKFVGDIQH 196
T+RE AR QGF D YK G I+
Sbjct: 663 TIRENARLQGFPDYYKLTGPIKE 685
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
PF T++D + DLP + NG E YK+ P +Q+++R ++++H +
Sbjct: 187 PF--TTIKDALSDLPELLNG------EDKGVGKYKTRPTSEYQRELRKGSQLVHNHSASK 238
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ +N+ R + IP+ G WR +P DL+P + K + +GR+ W+G
Sbjct: 239 LGAINIERMRYIPQ--GGSWRDVP----YDLLPAGMKRA--KRSDHTKRYGRMQWDGQSC 290
Query: 150 TSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T +T D H G HP QDR ITVRE AR Q F D + F G
Sbjct: 291 TVLTKCDIH----WGAYIHPEQDRSITVREAARIQSFPDWFHFTG 331
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 35 TVRDTIGDLPAV--GNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML-VLNDHISKAMS 91
TV D I DLP + GNG++ S Y S+P +QK +R D ++ +H +
Sbjct: 219 TVWDAISDLPPITGGNGSN--------ESVYLSQPKSDYQKVLRQDSPNIIYNHECAKLG 270
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++NL R + IP+ G WR +P E L+P L A + + K +GRL +G T
Sbjct: 271 KVNLDRLKHIPQ--GGSWRDIPFE----LLPDGL-KRARRSDHTK-RYGRLHPDGLCSTI 322
Query: 152 VT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+T DPH G+ FHP QDR+++VRE AR Q F DSY F G++
Sbjct: 323 LTKCDPH----WGSFFHPTQDRVLSVREAARIQSFPDSYVFKGNL 363
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 15/187 (8%)
Query: 22 VRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSE-PVLWFQKKIRGDML 80
VR+ +G RA V IG+ PA G+S G Y+ E P +Q ++R M
Sbjct: 1086 VRNPLSGVTQRA-NVPSFIGESPA---GSSTAGYPHGCD--YQQERPKTLYQARMRRGMH 1139
Query: 81 V---LNDHISKAMSELN--LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQW 135
V + H ++ E + + + +P +D R +P +V+ + P +A + W
Sbjct: 1140 VGKKVTLHYTRTFKEHSHKAEKVIAVAMRPNADHRTIP--RVLYDWAYSHPLSAAARDLW 1197
Query: 136 K-GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
G +GRLDW+G F + VT P G HP+Q R++T+RE AR QGF D Y+F GD
Sbjct: 1198 APGRYGRLDWQGVFNSFVTRIDPTSKQGKVLHPSQRRVLTIREVARGQGFPDHYQFCGDP 1257
Query: 195 QHIIGRL 201
II ++
Sbjct: 1258 GAIIRQI 1264
>gi|242212987|ref|XP_002472324.1| predicted protein [Postia placenta Mad-698-R]
gi|220728601|gb|EED82492.1| predicted protein [Postia placenta Mad-698-R]
Length = 1147
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 5 TGPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPA------------------- 45
TG LK H + +S P +TV D I DLP+
Sbjct: 874 TGEVLKPVTWSIRHKESGQSNHQCVPLLPVTVNDAIADLPSFDWVNPFNEIRPGPKDLDE 933
Query: 46 --------VGNGASVTTME---VGFSSP--YKSEPVLWFQKKIR-GDMLVLNDHISKAMS 91
+ +V ++E GF+ P Y P+ +Q IR G + H ++
Sbjct: 934 IGLRLAKGIRRFDAVPSLEPRLAGFTDPVPYAHPPMSRYQLWIRQGAGAEVTHHYTRLFP 993
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ R ++P P ++ LP++ V + ++ + ++ ++GR+D + F T+
Sbjct: 994 ARIVERVVRVPLTPNANHEGLPAKLRVGRL---FESSGDARKRYDRVYGRIDGDQIFQTA 1050
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+T P VG HPNQ RI+TVRECAR+QGF D Y+F
Sbjct: 1051 LTTVAPNSKVGRVLHPNQKRILTVRECARAQGFPDKYEF 1089
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-----LVLNDHI 86
R + ++D I DLP V N M PY EP FQ IR VL DH
Sbjct: 507 RELFLKDAISDLPPVENDEPKDEM------PYIDEPKSAFQHFIRSRRDGTLGSVLYDHR 560
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-----VDLIPWC-----------LPNTAE 130
++E + R +IPK+ G+++R LP +V V+L P +P+ A
Sbjct: 561 PLRLNEDDYERVCQIPKRKGANFRDLPGVRVRANNTVELDPDVERVKVASGKPLVPDYAI 620
Query: 131 KHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+ FGRL W+ PT VT P V HP QDR++T+RE AR QG D Y
Sbjct: 621 TFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQV--ILHPEQDRVLTIRENARLQGLPDYY 678
Query: 189 KFVGDIQH 196
K G I+
Sbjct: 679 KLTGPIKE 686
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 62 PYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWR---------VL 112
PY P +Q++ R + H ++ + + RC I +P +D++ V+
Sbjct: 1066 PYHHPPKTVYQRQARMKPVRNLQHFTRILKADTVKRCINIRLEPNADYKSTLLFAFTMVI 1125
Query: 113 PSE----KVVDLIPW--CLPNTAEKHNQWK-GLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
E DL+ W P++A +K G +GRLD FPT+VT+ P C
Sbjct: 1126 TDEWRKALRADLLEWNTANPSSAMVRKGFKSGAYGRLDMNAVFPTTVTNAGPTAKQSRCL 1185
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDIQHII 198
HP+ R++T+RE ARSQGF DS++FV +I
Sbjct: 1186 HPDSHRMLTIREFARSQGFPDSFEFVSLKDKVI 1218
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
Length = 398
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 24 STANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-GDMLVL 82
S APF T+R+ IGDLP++ NG ++ Y P +Q+ +R G + VL
Sbjct: 215 SPETDAPF--TTLREAIGDLPSLQNGERGEAVK-----EYPVRPQCDYQRALRRGSIGVL 267
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
N H + +S +N+ R I Q G +W +P E L+P + A K + K +GR
Sbjct: 268 N-HEAPRLSAINMQRLNYI--QQGGNWTDIPDE----LLPKGM-RKARKSDHTK-RYGRP 318
Query: 143 DWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
W+G T +T DPH G FHP+Q+R TVRE AR Q F D Y F G
Sbjct: 319 MWDGLSSTILTKCDPH----WGAFFHPDQNRAFTVREAARIQSFPDHYVFTG 366
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 91/208 (43%), Gaps = 45/208 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-------------- 77
+ I + D + DLP VGN S M PY +P FQ+ IR
Sbjct: 538 KPIVLEDILSDLPEVGNEESRDEM------PYVKDPQTEFQRYIRAFNSEVRGPKSRAAK 591
Query: 78 -----DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPW---- 123
L DH + N +R +IPK+ G+++R LP + V L P
Sbjct: 592 SKSRKAKPKLYDHRPFVLDNDNYLRVLQIPKKKGANFRDLPGVVVGPDNVAKLDPTKERI 651
Query: 124 CLP-------NTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
LP + K+ K L FGRL W+ T VT P+ HP QDR++T
Sbjct: 652 LLPSGNPLVLDCILKYEDGKSLRPFGRLWWDEVVGTVVTCPN--AHTQAFIHPAQDRLLT 709
Query: 175 VRECARSQGFSDSYKFVGDIQHIIGRLE 202
+RE AR QGF DSY+F G+++ ++E
Sbjct: 710 IRESARLQGFPDSYRFHGEVKERYCQIE 737
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 47/212 (22%)
Query: 22 VRSTANGAPFR---AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD 78
V + A G P + A+ ++D I DLP V N + PY+S P FQ+ IR
Sbjct: 1039 VVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKL------PYESLPKTDFQRYIRST 1092
Query: 79 ---------------MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD---- 119
++L+DH ++E + R +IPK+ G+++R LP V +
Sbjct: 1093 KRDLTGSAIDNCNKRTMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVRNNTVC 1152
Query: 120 ----LIPWCLPNTAE---------KHNQWKGLFGRLDWEGNFPTSVTDP--HPMGMVGTC 164
+ P LP+ + + K F RL W+ PT +T P H ++
Sbjct: 1153 RDPSMEPVILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALL--- 1209
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
HP QDR++T+RE AR QGF D ++F G I+
Sbjct: 1210 -HPEQDRVLTIRESARLQGFPDYFQFCGTIKE 1240
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 40/200 (20%)
Query: 29 APFRAITVRDTIGDLPAVG-----------------------NG-------ASVTTMEVG 58
AP +TV D IGDLP NG A G
Sbjct: 835 APLPTVTVMDAIGDLPQFDWINPHIELRKSKGDIREAREREENGIPSFDAVARSCKTLPG 894
Query: 59 FSSP--YKSEPVLWFQ---KKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP 113
F++P Y P+ +Q ++ G+ + S+ + + + R IP + +D LP
Sbjct: 895 FTAPAPYSFPPLTRYQTWARETAGEEVEY--QYSRTFTHMVVERVANIPFRADADHVDLP 952
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRII 173
V +P + ++G++GR+D G+F T++T P G HP Q RII
Sbjct: 953 R---VLYVPRMFESEGVPKKCYRGIYGRIDGNGHFWTAMTTIKPNAKGGRVLHPTQKRII 1009
Query: 174 TVRECARSQGFSDSYKFVGD 193
TVRECAR+QGF D YKF+ +
Sbjct: 1010 TVRECARAQGFPDHYKFLSN 1029
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 60 SSPYKSEPVLWFQKKIR-GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV 118
++PY + P+ +Q+ IR G ++ ++ + + R +P P +D LP + +
Sbjct: 499 ATPYLTLPMNSYQEWIRQGSSSLVKHQYTRRFAASVVERVLNVPFGPEADHTDLPHQLRI 558
Query: 119 DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+ W+G+ GR+D G F T++T P G G HPNQ RI+TVREC
Sbjct: 559 SRM-------------WQGVCGRIDENGFFGTALTTVMPTGQCGKLLHPNQKRIVTVREC 605
Query: 179 ARSQGFSDSYKF 190
AR+QGF D Y+F
Sbjct: 606 ARAQGFPDWYEF 617
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP N ME Y ++P FQ IR DML
Sbjct: 641 KALLLGDAISDLPKANNFQPHEVME------YGAQPKTEFQSYIRLSRKDMLDYSFGDNT 694
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH +++ + R Q+IP + G+++R LP KV +++ W
Sbjct: 695 CPEEGKLLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGVKVGANNIVEWDPEVQRVYLK 754
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 755 SGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVRE 812
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 813 NARLQGFPDYYRMNGPIKE 831
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---------------- 76
A+ + D I DLP V N ME Y S P FQ+ IR
Sbjct: 115 ALLLGDAISDLPEVNNHQPNEVME------YGSSPKTEFQRYIRLSRKEMLDSSFEGKDG 168
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW----------- 123
D+ L DH +++ + R Q+IP + G+++R L +V +++ W
Sbjct: 169 PDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSS 228
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 229 GKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVREN 286
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 287 ARLQGFPDYYKMFGPIKE 304
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM------------ 79
+A+ ++D I DLP V N + PY+S P FQ+ IR
Sbjct: 1010 KALVLKDAISDLPHVSNDEDREKL------PYESPPETDFQRYIRSTKRDLTGSATDNSN 1063
Query: 80 ---LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD--------LIPWCLPNT 128
++L+DH ++E + R +IPK+ G+++R LP V + + P LP+
Sbjct: 1064 KRKMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVRNNTVCRDPSMEPVILPSG 1123
Query: 129 AE---------KHNQWKGLFGRLDWEGNFPTSVTDP--HPMGMVGTCFHPNQDRIITVRE 177
+ + K F RL W+ PT +T P H ++ HP QDR++T+RE
Sbjct: 1124 KPLVPGYVFNFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALL----HPEQDRMLTIRE 1179
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D ++F G I+
Sbjct: 1180 SARLQGFPDYFQFCGTIKE 1198
>gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris]
Length = 308
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 83/182 (45%), Gaps = 31/182 (17%)
Query: 38 DTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR----GDM-LVLNDHISKAMSE 92
D + DLP+V N M PY +EP FQ IR G + VL DH +++
Sbjct: 83 DALSDLPSVENNEQRDEM------PYTNEPTSDFQHFIRLGRDGALGSVLYDHRPLQLND 136
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVD-------------LIPWCLPNTAEKHNQWKG-- 137
+ R +IPK+ G+++R LP +V +P P + + G
Sbjct: 137 DDYQRVCQIPKREGANFRDLPGVRVRSDNKVEWDPDVERVKLPSGKPLVPDYAMSFVGGS 196
Query: 138 ---LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
FGRL W+ PT VT P T HP Q+R++T+RE AR QGF D YK G I
Sbjct: 197 STKPFGRLWWDETVPTVVTRAEPHNQ--TIIHPQQNRVLTIRENARLQGFPDYYKLTGPI 254
Query: 195 QH 196
+
Sbjct: 255 KE 256
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---------------- 76
A+ + D I DLP V N ME Y S P FQ+ IR
Sbjct: 150 ALLLGDAISDLPEVNNHQPNEVME------YGSSPKTEFQRYIRLSRKEMLDSSFEGKDG 203
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW----------- 123
D+ L DH +++ + R Q+IP + G+++R L +V +++ W
Sbjct: 204 PDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSS 263
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 264 GKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVREN 321
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 322 ARLQGFPDYYKMFGPIKE 339
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 39/193 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-----------GDMLVL 82
+ ++D + DLPAVGN S + Y EP FQ +R +L
Sbjct: 467 LVLKDALSDLPAVGNDQSKDDIS------YDEEPQCDFQHFLRLPKKGSLGPQQKKKAIL 520
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVL-----------------PSEKVVDLIPWCL 125
DH ++ + R ++IPK+ G+++R L P E + P +
Sbjct: 521 PDHRPLCLNADDYERVKQIPKKKGANFRDLKGIIIKADGVTVDVVREPRELLKSGKPL-V 579
Query: 126 PNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQG 183
P+ A + + FGRL W+ PT VT P + HP QDR++T+RE AR QG
Sbjct: 580 PDYAISFIRGRSFKPFGRLWWDETVPTVVTRAEPHNQI--ILHPEQDRVLTIRENARLQG 637
Query: 184 FSDSYKFVGDIQH 196
FSD YK G I+
Sbjct: 638 FSDYYKLFGPIKQ 650
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 62 PYKSEPVLWFQKKIR-GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE-KVVD 119
PY P+ +Q +R G+ + H ++ +S+L + R IP +P + LP + +V
Sbjct: 912 PYPQPPLSRYQSWLRAGNGDTVQYHYTRWLSKLVVERVVNIPMKPNAGHEDLPLDLRVTK 971
Query: 120 LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECA 179
L T + + ++ L+GR+ G F T++T P G HP+Q RI+T+RECA
Sbjct: 972 LYKT---ETGKPKSVYRSLYGRIASNGQFVTAMTTIAPNAKGGRVIHPDQKRILTIRECA 1028
Query: 180 RSQGFSDSYKFVG 192
R+QGF D Y+F+
Sbjct: 1029 RAQGFPDRYQFLS 1041
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-----LVLNDHI 86
R + ++D I LP V + M PY EP FQ IR VL DH
Sbjct: 507 RELFLKDAISALPPVEHDEPTDEM------PYIDEPKSAFQHFIRSRRNGTLGSVLYDHR 560
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-----VDLIPWC-----------LPNTAE 130
++E + R +IPK+ G+++R LP +V V+L P +P+ A
Sbjct: 561 PLRLNEDDYQRVCQIPKRKGANFRDLPGVRVRANNTVELDPDVERVKVASGKPLVPDYAI 620
Query: 131 KHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+ FGRL W+ PT VT P V HP QDR++T+RE AR QGF D Y
Sbjct: 621 TFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQV--ILHPEQDRVLTIRENARLQGFPDYY 678
Query: 189 KFVGDIQH 196
K G I+
Sbjct: 679 KLTGPIKE 686
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 28/162 (17%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IGDLP + G EV Y S P +Q IR + + +H+++A++ +
Sbjct: 214 VTVRDAIGDLPPLEAGQKYEA-EV-----YPSAPQTTYQAMIRNQSVKVVNHVARALTPI 267
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L R + + + G D R LP+E L P + G +GRL W+ P
Sbjct: 268 QLSRVRLLTE--GQDARDLPTE----LAP---------KKYYSGAYGRLYWDK--PARTI 310
Query: 154 DP---HPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
HP G FHP QDR IT+RE AR + D++ F+G
Sbjct: 311 TRWVFHPGS--GRFFHPTQDRTITIREAARLHSYPDNFHFLG 350
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 30 PFRAITVRDTIGDLP---------AVGNGASV--------TTMEVGFSSPYKSEPVLWFQ 72
P ++TV D IGDL A G + + T E F++PY EP +Q
Sbjct: 555 PHCSVTVGDAIGDLQPFDWSPGIRAAGASSKIDSFPCDPKTGCEPDFATPYAFEPQNEYQ 614
Query: 73 KKIRGDMLVLN----DHISKAM-SELNLIRCQKIPKQPGSDWRVLPSEKVVD-LIPWCLP 126
+ R V + HI+ SE+ C P +D+R + S + D +I +
Sbjct: 615 LRARNSGDVTDVPQLQHITAGYPSEVVRKICSMSPTD--ADYRGMGSHRKSDYMISDPVS 672
Query: 127 NTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
+T K + RL+ + F T VT HP G HP+Q+R+I+VRE AR QGF D
Sbjct: 673 STGRKGFAPGVYYRRLNNDDAFSTLVTKVHPTGKQSQVIHPSQNRLISVREMARGQGFPD 732
Query: 187 SYKFVGDI---QHIIG 199
S++F G I QH +G
Sbjct: 733 SFRFEGSITEMQHQLG 748
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TV+D IGDLPA+ NG E+G Y+ +Q+ +R + + H + +S+
Sbjct: 225 VTVKDAIGDLPALCNG------EIGEQVKDYRHPADNPYQQLMRAGSIGVTCHEAGRLSK 278
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP PG +W +P L+P + A + + K +GR++ EG T +
Sbjct: 279 INLERMTHIP--PGGNWTDIPDA----LLPSGM-RMARRSDHTK-RYGRVNPEGLASTIL 330
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F D+Y F G
Sbjct: 331 TKCDPH----WGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 368
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 40/195 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD----------MLV 81
+A +RD I DLP VT+ E Y P FQ+ IR + +
Sbjct: 504 KATVLRDAISDLP------DVTSHETREEMAYDKPPETDFQQFIRSTRNGNLSGTRMINL 557
Query: 82 LNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD--------LIPWCLPNT 128
L DH +++E + R +IPK+ G+++R LP ++ V L+P P
Sbjct: 558 LYDHRPYSLTEEDFARVCQIPKKKGANFRDLPGVVVGADNVARRDPTEEQMLLPSGKPLV 617
Query: 129 AEKHNQWKG-----LFGRLDWEGNFPTSVTDP--HPMGMVGTCFHPNQDRIITVRECARS 181
+ ++G + RL W+ T VT P H ++ HP QDR++T+RECAR
Sbjct: 618 PDFALNFEGGKSRRPYARLWWDETVSTVVTFPDLHSQAVM----HPEQDRVLTIRECARL 673
Query: 182 QGFSDSYKFVGDIQH 196
QGF D Y+F G ++
Sbjct: 674 QGFPDYYRFCGTVKQ 688
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 47/212 (22%)
Query: 22 VRSTANGAPFR---AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD 78
V + A G P + A+ ++D I DLP V N + PY+S P FQ+ IR
Sbjct: 988 VVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKL------PYESLPKTDFQRYIRST 1041
Query: 79 ---------------MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD---- 119
++L+DH ++E + R +IP + G+++R LP V +
Sbjct: 1042 KRDLTGSAIDNCNKRTMLLHDHRPFHINEDDYARVCQIPNRKGANFRDLPGIIVRNNTVC 1101
Query: 120 ----LIPWCLPNTAE---------KHNQWKGLFGRLDWEGNFPTSVTDP--HPMGMVGTC 164
+ P LP+ + + K F RL W+ PT +T P H ++
Sbjct: 1102 RDPSMEPVILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALL--- 1158
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
HP QDR++T+RE AR QGF D ++F G I+
Sbjct: 1159 -HPEQDRVLTIRESARLQGFPDYFQFCGTIKE 1189
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML------VLNDH 85
R + + D I DLPAV N M PY P FQ+ IR + +L DH
Sbjct: 737 RKLFLEDAISDLPAVANDEKRDEM------PYGESPKTEFQRMIRLKKMGLELNDLLFDH 790
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPWC-----------LPNTA 129
+++ + R +IPK+ G ++R LP +K V+ P +P+ A
Sbjct: 791 RPLELNDDDYQRVCQIPKRKGGNFRDLPGVRVRPDKKVEWDPEVPRQYLSSGKPLVPDYA 850
Query: 130 EK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
+ F RL W+ PT VT P HP QDR++T+RE AR QGF D
Sbjct: 851 MTFVNGSSSKPFARLWWDETVPTVVTRAEPHNQA--IMHPEQDRVLTIRENARLQGFPDY 908
Query: 188 YKFVGDIQH 196
Y+ G I+
Sbjct: 909 YQLCGPIKE 917
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 41 GDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQK 100
GD+PA+ + Y EP +QK R H +K + E + R
Sbjct: 1130 GDIPALVCEHKKSHCGYEGRKEYDCEPRTKYQKDAREKETTNLQHFTKTVKERKVERVLG 1189
Query: 101 IPKQPGSDWRVLPSEKVVDLIPWCLPN---TAEKHNQWKGLFGRLDWEGNFPTSVTDPHP 157
I +PG+D+R L D+ W N + + N G +GRLD + FPT VT+ P
Sbjct: 1190 ISLKPGADYRSLRP----DMHEWQWANPISSTGRQNFRPGWYGRLDKDSCFPTIVTNIDP 1245
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
M HP+ R++TVRE AR+QGF D + F
Sbjct: 1246 MAKQCRVLHPSCKRMVTVRELARAQGFPDWFVF 1278
>gi|425466058|ref|ZP_18845361.1| Cytosine specific DNA methyltransferase (fragment) [Microcystis
aeruginosa PCC 9809]
gi|389831585|emb|CCI25533.1| Cytosine specific DNA methyltransferase (fragment) [Microcystis
aeruginosa PCC 9809]
Length = 190
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 35/183 (19%)
Query: 19 YAAVRS-------TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWF 71
Y AV+S N AP TV+D I DLP + G + E+ Y EP +
Sbjct: 3 YKAVKSWTQLTLLETNIAP--VTTVKDAISDLPTLEAGQAYD-HEI-----YTREPETIY 54
Query: 72 QKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEK 131
Q+K+R + +HI++A++ + + R Q + + G D R LP+E L P +K
Sbjct: 55 QQKMREQSQKIVNHIARALTPIQMSRVQILAE--GQDARDLPAE----LAP-------KK 101
Query: 132 HNQWKGLFGRLDWEGNFPTSVTD--PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
H + G +GRL W+ T +T HP G FHP Q+R IT+RE AR + D +
Sbjct: 102 H--YSGAYGRLSWDKPART-ITRWFFHPGS--GRFFHPTQNRTITIREAARLHSYPDHFH 156
Query: 190 FVG 192
F+G
Sbjct: 157 FLG 159
>gi|422870278|ref|ZP_16916771.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
Length = 387
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 25/169 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
IT+RD I DLP +GN + Y EP +Q +RG+ L +H+S+ E
Sbjct: 210 ITLRDAISDLPILGNNEQ--------KNNYICEPRTEYQALLRGNQTELLNHVSRNHGE- 260
Query: 94 NLIRCQKIPKQPG-----SDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
R QKI + G +D + + ++D + + +GRL W+
Sbjct: 261 ---RLQKIMRALGEGQGKNDINRMVEDGILDKDLYLTSG-------YNNTYGRLWWDKP- 309
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T++T+ C HP Q+R +T RE AR Q F D+YKFVG +Q I
Sbjct: 310 STTITNNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQAI 358
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---------------- 76
A+ + D I DLP V N ME G S P FQ+ IR
Sbjct: 651 ALLLGDAISDLPEVNNHQPNEVMEYG------SSPKTEFQRYIRLSRKEMLDSSFEGKDG 704
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW----------- 123
D+ L DH +++ + R Q+IP + G+++R L +V +++ W
Sbjct: 705 PDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSS 764
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 765 GKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVREN 822
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 823 ARLQGFPDYYKMFGPIKE 840
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---------------- 76
A+ + D I DLP V N ME G S P FQ+ IR
Sbjct: 651 ALLLGDAISDLPEVNNHQPNEVMEYG------SSPKTEFQRYIRLSRKEMLDSSFEGKDG 704
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW----------- 123
D+ L DH +++ + R Q+IP + G+++R L +V +++ W
Sbjct: 705 PDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSS 764
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 765 GKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVREN 822
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 823 ARLQGFPDYYKMFGPIKE 840
>gi|166362816|ref|YP_001655089.1| cytosine specific DNA methyltransferase, partial [Microcystis
aeruginosa NIES-843]
gi|166085189|dbj|BAF99896.1| cytosine specific DNA methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 261
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 35/185 (18%)
Query: 17 SHYAAVRS-------TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
S Y AV+S N AP TV+D I DLP + G + E+ Y EP
Sbjct: 72 SDYKAVKSWTQLTLLEPNIAP--VTTVKDAISDLPTLEAGQAYD-HEI-----YTREPET 123
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+Q+K+R + +HI++A++ + + R Q + + G D R LP+E L P
Sbjct: 124 IYQQKMREQSQKIVNHIARALTPIQMSRVQILAE--GQDARDLPAE----LAP------- 170
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTD--PHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
+KH + G +GRL W+ T +T HP G FHP Q+R IT+RE AR + D
Sbjct: 171 KKH--YSGAYGRLSWDKPART-ITRWFFHPGS--GRFFHPTQNRTITIREAARLHSYPDH 225
Query: 188 YKFVG 192
+ F+G
Sbjct: 226 FHFLG 230
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---------------- 76
A+ + D I DLP V N ME Y S P FQ+ IR
Sbjct: 651 ALLLGDAISDLPEVNNHQPNEVME------YGSSPKTEFQRYIRLSRKEMLDSSFEGKDG 704
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW----------- 123
D+ L DH +++ + R Q+IP + G+++R L +V +++ W
Sbjct: 705 PDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSS 764
Query: 124 ---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + + L FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 765 GKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVREN 822
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 823 ARLQGFPDYYKMFGPIKE 840
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 17 SHYAAVRS-------TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
S Y AV+S N AP TV+D I DLP + G + E+ Y EP
Sbjct: 192 SDYKAVKSWTQLTLLEPNIAP--VTTVKDAISDLPTLEAGQAYD-HEI-----YTREPET 243
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+Q+K+R + +HI++A++ + + R Q + + G D R LP+E L P
Sbjct: 244 IYQQKMREQSQKIVNHIARALTPIQMSRVQILAE--GQDARDLPAE----LAP------- 290
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDP---HPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
+KH + G +GRL W+ P HP G FHP Q+R IT+RE AR + D
Sbjct: 291 KKH--YSGAYGRLSWDK--PARTITRWFFHPGS--GRFFHPTQNRTITIREAARLHSYPD 344
Query: 187 SYKFVG 192
+ F+G
Sbjct: 345 HFHFLG 350
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 17 SHYAAVRS-------TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
S Y AV+S N AP TV+D I DLP + G + E+ Y EP
Sbjct: 192 SDYKAVKSWTQLTVLEPNIAP--VTTVKDAISDLPTLEAGQAYD-HEI-----YTREPET 243
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+Q+K+R + +HI++A++ + + R Q + + G D R LP+E L P
Sbjct: 244 IYQQKMREQSQKIVNHIARALTPIQMSRVQILAE--GQDARDLPAE----LAP------- 290
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDP---HPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
+KH + G +GRL W+ P HP G FHP Q+R IT+RE AR + D
Sbjct: 291 KKH--YSGAYGRLSWDK--PARTITRWFFHPGS--GRFFHPTQNRTITIREAARLHSYPD 344
Query: 187 SYKFVG 192
+ F+G
Sbjct: 345 HFHFLG 350
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 17 SHYAAVRS-------TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
S Y AV+S N AP TV+D I DLP + G + E+ Y EP
Sbjct: 192 SDYKAVKSWTQLTLLEPNIAP--VTTVKDAISDLPTLEAGQAYD-HEI-----YTREPET 243
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+Q+K+R + +HI++A++ + + R Q + + G D R LP+E L P
Sbjct: 244 IYQQKMREQSQKIVNHIARALTPIQMSRVQILAE--GQDARDLPAE----LAP------- 290
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDP---HPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
+KH + G +GRL W+ P HP G FHP Q+R IT+RE AR + D
Sbjct: 291 KKH--YSGAYGRLSWDK--PARTITRWFFHPGS--GRFFHPTQNRTITIREAARLHSYPD 344
Query: 187 SYKFVG 192
+ F+G
Sbjct: 345 HFHFLG 350
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 16 NSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI 75
+S+ A T N I + D + DLP V N M PY +P FQK I
Sbjct: 552 HSNVVAYEETDNVKLADKILLSDVLTDLPVVANNERRAEM------PYDKDPKTPFQKFI 605
Query: 76 R---GDML-------------VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV- 118
R ML VL DH +++ + R +IPK+ +++R LP V
Sbjct: 606 RLTQEGMLASPKDPKSNSKNEVLYDHHPLNLNKDDYQRVCRIPKKKQANFRDLPGVTVNA 665
Query: 119 -DLIPW--------------CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMV 161
+ + W +P A K + K FGRL W+ PT + P V
Sbjct: 666 NNKVEWDPKIPRIYLESNHPLIPEYAMKFVEGKSKKPFGRLWWDETVPTVIGRAEPHNHV 725
Query: 162 GTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
HPNQDR++TVRE AR QGF D Y+ G
Sbjct: 726 --IIHPNQDRVLTVRENARLQGFPDYYRLFG 754
>gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150]
gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150]
Length = 387
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 25/169 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
IT+RD I DLP +GN Y EP +Q +RG+ L +H+S+ E
Sbjct: 210 ITLRDAISDLPILGNNEQ--------KYNYICEPRTEYQALLRGNQTELLNHVSRNHGE- 260
Query: 94 NLIRCQKIPKQPG-----SDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
R QKI + G +D + + ++D + + +GRL W+
Sbjct: 261 ---RLQKIMRALGEGQGKNDINRMVEDGILDKDLYLTSG-------YNNTYGRLWWDKP- 309
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T++T+ C HP+Q+R +T RE AR Q F D+YKFVG +Q I
Sbjct: 310 STTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQAI 358
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TVRD IGDLP++ NG E+G Y+ +QK +R + H + +S+
Sbjct: 230 VTVRDAIGDLPSLCNG------EIGEQVKSYRHSADNQYQKLMRIGSDGVTCHEAARLSK 283
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP+ G +W +P E L+P + A + + K +GR+ +G T +
Sbjct: 284 INLERMAHIPQ--GGNWTNIPDE----LLPRGM-RMARRSDHTK-RYGRVHPDGLASTIL 335
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F D+Y F G
Sbjct: 336 TKCDPH----WGAYFHYEQDRTFTVREAARLQSFPDTYTFCG 373
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TV+D IGDLPA+ NG E+G Y+ +Q+ +R + H + +S+
Sbjct: 215 VTVKDAIGDLPALHNG------EIGEQVKDYRHPADNPYQQLMRAGSTGVTCHEAARLSK 268
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP PG +W +P L+P + A + + K +GR++ +G T +
Sbjct: 269 INLERMTHIP--PGGNWTDIPEA----LLPRGM-RMARRSDHTK-RYGRVNPDGLASTIL 320
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F D+Y F G
Sbjct: 321 TKCDPH----WGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 358
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TV+D IGDLPA+ NG E+G Y+ +Q+ +R + H + +S+
Sbjct: 219 VTVKDAIGDLPALHNG------EIGEQVKDYRHPADNPYQQLMRAGSTGVTCHEAARLSK 272
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP PG +W +P L+P + A + + K +GR++ +G T +
Sbjct: 273 INLERMTHIP--PGGNWTDIPEA----LLPRGM-RMARRSDHTK-RYGRVNPDGLASTIL 324
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F D+Y F G
Sbjct: 325 TKCDPH----WGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 362
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N ME G S P FQ+ IR DML
Sbjct: 656 KALLLGDAISDLPKVENHQPKEVMEYGGS------PKTEFQRYIRLSRKDMLDWSFGEEA 709
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R Q+IP + G+++R L KV +++ W
Sbjct: 710 GPDKGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVKVGANNIVEWDPEIERVKLS 769
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P + HP Q R++T+RE
Sbjct: 770 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHPTQARVLTIRE 827
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 828 NARLQGFPDYYRLFGPIKE 846
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DMLV------- 81
+A+ + D+I DLP V N + + PY+ P FQK+IR D V
Sbjct: 544 KALFLGDSISDLPPVKNCETRDEI------PYRDGPKTEFQKRIRSARDDFAVFYGRGPR 597
Query: 82 -----LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK 136
++DH +++ + R +IPK+ G+++R L K+ D L T E+
Sbjct: 598 AMNSTVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIKDDNSVTLDLTVEREYLPS 657
Query: 137 GL------------------FGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVR 176
G F R+ W+ PT +T +PH M+ HP QDR++TVR
Sbjct: 658 GKPLIPDYAISFIKGRSLKPFARMWWDETVPTVITRAEPHNHRML----HPTQDRVLTVR 713
Query: 177 ECARSQGFSDSYKFVGDIQH 196
E AR QGF D YK G ++
Sbjct: 714 ENARLQGFPDWYKLTGSVKE 733
>gi|297804900|ref|XP_002870334.1| hypothetical protein ARALYDRAFT_915483 [Arabidopsis lyrata subsp.
lyrata]
gi|297316170|gb|EFH46593.1| hypothetical protein ARALYDRAFT_915483 [Arabidopsis lyrata subsp.
lyrata]
Length = 178
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI 86
N PF +ITVRDTIGDLP V NG S + Y + PV WFQKKIRG+M+VL DHI
Sbjct: 105 NLVPFHSITVRDTIGDLPLVENGES------KLNKDYGATPVSWFQKKIRGNMIVLTDHI 158
Query: 87 SKAMSE 92
K +++
Sbjct: 159 CKGLND 164
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 29 APFRAITVRDTIGDLP-------------AVGNGASVTTMEV---------GFSSP---- 62
AP R +TV D IGDL A GN ++ V G+ P
Sbjct: 851 APHRFVTVEDAIGDLKRFDWRKPNPAHPQANGNNNALQLPSVVCDNERAFCGYQGPSATV 910
Query: 63 -YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLI 121
Y+SEP FQ R ++ + R +P Q G+D+R +P E L
Sbjct: 911 GYESEPRNTFQAWARSRPSTDIQQYTRTYEPTKVARVMSVPMQAGADYRSIPRE----LW 966
Query: 122 PWCL--PNTAEKHNQWK-GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
W P++A ++ G++GR+D + F T+VT+ P +P R++TVRE
Sbjct: 967 EWQFANPSSAVARGGFRAGMYGRIDQDKWFQTTVTNVDPTAKQCKVLNPWCKRMVTVREL 1026
Query: 179 ARSQGFSDSYKFVGDIQHII 198
ARSQGF D + F I+
Sbjct: 1027 ARSQGFPDHFVFYAGADRIL 1046
>gi|147801050|emb|CAN77846.1| hypothetical protein VITISV_020830 [Vitis vinifera]
Length = 272
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 76 RGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKVVDL 120
+ + VL DH+ ++E + +R +IPK+ G+++R LP +E +
Sbjct: 80 KAEKSVLYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTEMELPS 139
Query: 121 IPWCLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A ++ K F RL W+ PT +T P P HP QDR++TVRE
Sbjct: 140 GKQMVPDYALNFSEGKSTKPFARLWWDETVPTVLTKPDPH--CQAYLHPEQDRVLTVRES 197
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YKF G ++
Sbjct: 198 ARLQGFPDYYKFCGQVKE 215
>gi|334821746|gb|AEG90849.1| DNA(cytosine-5)-methyltransferase 1 [Apostichopus japonicus]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLN 83
+ P+R ITVRD++ DLP + NGA+ +E+ Y EP QK IRG+ +L
Sbjct: 37 STSPPYRTITVRDSMSDLPPIKNGAN--KLEIS----YDGEPQTDSQKMIRGNQYQPILR 90
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV 118
DHI K MS L R + IP PGSDWR LP+ +V
Sbjct: 91 DHICKEMSPLVEARMRHIPLAPGSDWRDLPNIEVA 125
>gi|194688394|gb|ACF78281.1| unknown [Zea mays]
Length = 322
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N ME G S P FQ+ IR DML
Sbjct: 64 KALLLGDAISDLPKVQNHQPNDVMEYGGS------PKTEFQRYIRLSRKDMLDWSFGEGA 117
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R Q+IP + G+++R L +V +++ W
Sbjct: 118 GPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLS 177
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 178 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRE 235
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 236 NARLQGFPDYYRLFGPIKE 254
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N +E Y+ +P FQ+ IR DML
Sbjct: 477 KALLLGDAISDLPKVDNYQPHEVIE------YRGQPKTEFQRYIRLSRKDMLDYSFGDDT 530
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH +++ + R Q+IP + G++ R LP KV +++ W
Sbjct: 531 CPEEGKLLDHQPLRLNQDDYDRVQQIPIKKGANSRDLPGVKVGANNIVEWDPEVERVYLK 590
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + + FGRL W+ PT VT P + HPNQ R++TVRE
Sbjct: 591 SGKPLVPDYAMSFIKGRSPKPFGRLWWDETVPTVVTRAEPHNQI--ILHPNQGRVLTVRE 648
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G ++
Sbjct: 649 NARLQGFPDYYRMNGPMKE 667
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
IT+RD I DLP +GN Y EP +Q +RG+ L +H+S+ E
Sbjct: 210 ITLRDAISDLPILGNNEQKYN--------YICEPKTEYQALLRGNQTDLLNHVSRNHGE- 260
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
R QKI + G K+V+ L + + +GRL W+ T++T
Sbjct: 261 ---RLQKIMRALGEGQGKSDINKMVE--DGELGQDLYLTSGYNNTYGRLWWD-RPSTTIT 314
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+ C HP Q+R +T RE AR Q F D+YKFVG +Q I
Sbjct: 315 NNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQAI 358
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP N ME Y ++P FQ+ IR DML
Sbjct: 640 KALLLGDAISDLPEANNYQLHEVME------YGTKPKTEFQRYIRLGRKDMLDHSFGDNT 693
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH +++ + R Q+IP + G+++R LP KV +++ W
Sbjct: 694 CPEEGKLLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGIKVGANNIVEWDPEVPRVYLK 753
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + + L FGRL W+ T VT P + HPNQ R+++VRE
Sbjct: 754 SGKPLVPDYAMSFIKGRSLKPFGRLWWDETVSTVVTRAEPHNQI--ILHPNQARVLSVRE 811
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 812 NARLQGFPDYYRMNGPIKE 830
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND------- 84
+A+ + D I DLP VGN +E Y P FQ+ IR + + D
Sbjct: 773 KALLLADAISDLPKVGNDQPKDVIE------YSVAPKTEFQRYIRNNRKDIQDYSFRGDD 826
Query: 85 ---------HISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPWC------ 124
H +++ + R Q+IP + G+++R L + V L P
Sbjct: 827 PSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDNTVRLDPNISRERLS 886
Query: 125 -----LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K FGRL W+ PT VT P + HP+QDR++T+RE
Sbjct: 887 SGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQI--ILHPSQDRVLTIRE 944
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ +G ++
Sbjct: 945 NARLQGFPDYYRLIGPLKE 963
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND------- 84
+A+ + D I DLP VGN +E Y P FQ+ IR + + D
Sbjct: 773 KALLLADAISDLPKVGNDQPKDVIE------YSVAPKTEFQRYIRNNRKDIQDYSFRGDD 826
Query: 85 ---------HISKAMSELNLIRCQKIPKQPGSDWR-----VLPSEKVVDLIPWC------ 124
H +++ + R Q+IP + G+++R ++ + V L P
Sbjct: 827 PSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDNTVRLDPNISRERLS 886
Query: 125 -----LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K FGRL W+ PT VT P + HP+QDR++T+RE
Sbjct: 887 SGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQI--ILHPSQDRVLTIRE 944
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ +G ++
Sbjct: 945 NARLQGFPDYYRLIGPLKE 963
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N ME G S P FQ+ IR DML
Sbjct: 657 KALLLGDAISDLPKVQNHQPNDVMEYGGS------PKTEFQRYIRLSRKDMLDWSFGEGA 710
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R Q+IP + G+++R L +V +++ W
Sbjct: 711 GPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLS 770
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 771 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRE 828
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 829 NARLQGFPDYYRLFGPIKE 847
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N ME G S P FQ+ IR DML
Sbjct: 654 KALLLGDAISDLPKVQNHQPNDVMEYGGS------PKTEFQRYIRLSRKDMLDWSFGEGA 707
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R Q+IP + G+++R L +V +++ W
Sbjct: 708 GPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLS 767
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 768 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRE 825
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 826 NARLQGFPDYYRLFGPIKE 844
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N ME G S P FQ+ IR DML
Sbjct: 526 KALLLGDAISDLPKVQNHQPNDVMEYGGS------PKTEFQRYIRLSRKDMLDWSFGEGA 579
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R Q+IP + G+++R L +V +++ W
Sbjct: 580 GPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLS 639
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 640 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRE 697
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 698 NARLQGFPDYYRLFGPIKE 716
>gi|431901786|gb|ELK08663.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 122
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 137 GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
GL+GRL+W+G F T+VT+ PMG G HP Q +++V ECA S+GF D+Y+ G+I
Sbjct: 18 GLYGRLEWDGFFSTTVTNHEPMGKQGLVLHPKQHHVVSVHECACSRGFPDTYRLFGNIMD 77
Query: 197 IIGRL 201
I ++
Sbjct: 78 KIQQV 82
>gi|409052037|gb|EKM61513.1| hypothetical protein PHACADRAFT_204683 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1320
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 43/206 (20%)
Query: 24 STANG-APFRAITVRDTIGDL------------------PAVGNGASVTTME-------- 56
+T NG APFR +TV D IGDL P +E
Sbjct: 1062 NTENGIAPFRYVTVDDAIGDLLRWDWVNPRKGAERERRDPGTREAIRAVKVEQTKKAVGP 1121
Query: 57 -----VGFSSPYKSEPVLWFQKKIRGDMLVLND--HISKAMSELNLIRCQKIPKQPGSDW 109
V + P ++ FQ+K R + D HI++ + + R IP + +D+
Sbjct: 1122 LAAGTVKYHGPARTR----FQEKARVKQSEIKDLQHITRVLKLDTVARVTLIPLEAKADY 1177
Query: 110 RVLPSEKVV--DLIPW--CLPNTA-EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
L +K + DL+ W P +A +H GL+GR+D F T+VT+ P
Sbjct: 1178 HALLKDKDIPRDLLEWHWADPKSAIARHGFRPGLYGRMDPNEWFQTTVTNVEPTAKQCKV 1237
Query: 165 FHPNQDRIITVRECARSQGFSDSYKF 190
+P R+++VRE ARSQGF D ++F
Sbjct: 1238 LNPFCKRVVSVRELARSQGFPDHFQF 1263
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND------- 84
+A+ + D I DLP VGN +E Y P FQ+ IR + + D
Sbjct: 773 KALLLADAISDLPKVGNDQPKDVIE------YSVAPKTEFQRYIRNNRKDIQDYSFRGDD 826
Query: 85 ---------HISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPWC------ 124
H +++ + R Q+IP + G+++R L + V L P
Sbjct: 827 PSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDNTVRLDPNISRERLS 886
Query: 125 -----LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K FGRL W+ PT VT P + HP+QDR++T+RE
Sbjct: 887 SGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQI--ILHPSQDRVLTIRE 944
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ +G ++
Sbjct: 945 NARLQGFPDYYRLIGPLKE 963
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSE-PVLWFQKKIRGDMLVLNDHISKAMSE 92
+ V+D D AVG GA G PY+ + P +Q++ RG ++++H + +
Sbjct: 1039 VAVKD---DRQAVGIGA-------GGPVPYRGDSPFTSYQQEARGSETMVSEHYTSSFKS 1088
Query: 93 LNLIRCQKIPKQPGSDWRVLPSE-KVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ IP +D R LP K D + + ++G FGR D + F T
Sbjct: 1089 PLFVDVVNIPLSAKADHRALPEVLKRGDFLSNVF-GSGGASGYYQGAFGRYDKKAPFATI 1147
Query: 152 VTDPHPMGMVGTCFHPN-------QDRIITVRECARSQGFSDSYKFVGDIQHI 197
+T P G C HP+ Q R++T+RE AR+QGF D ++F G ++ +
Sbjct: 1148 LTSLRPAKKNGFCIHPDVGGFTLAQKRMLTMRELARAQGFPDHFRFHGTVEQV 1200
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND------- 84
+A+ + D I DLP VGN +E Y P FQ+ IR + + D
Sbjct: 491 KALLLADAISDLPKVGNDQPKDVIE------YSVAPKTEFQRYIRNNRKDIQDYSFRGDD 544
Query: 85 ---------HISKAMSELNLIRCQKIPKQPGSDWR-----VLPSEKVVDLIPWC------ 124
H +++ + R Q+IP + G+++R ++ + V L P
Sbjct: 545 PSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDNTVRLDPNISRERLS 604
Query: 125 -----LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K FGRL W+ PT VT P + HP+QDR++T+RE
Sbjct: 605 SGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQI--ILHPSQDRVLTIRE 662
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ +G ++
Sbjct: 663 NARLQGFPDYYRLIGPLKE 681
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 86/215 (40%), Gaps = 56/215 (26%)
Query: 29 APFRAITVRDTIGDLPAV-----------------------------------GNGASVT 53
AP + I V D IGDLP GN ++
Sbjct: 1057 APLKPILVDDAIGDLPPFEWTNPHQVIPRTSSQKDKRRSLKTPIPQFDAVLLQGNKGTIF 1116
Query: 54 TMEVGFSS--PYKSEPVLWFQKKIRGDML--------VLNDHISKAMSELNLIRCQKIPK 103
+ GF PY S P +QK +R M+ + DH + S + +P
Sbjct: 1117 S-NPGFPEGVPYMSGPQNRYQKWLRQGMVDEESDTESEVQDHFTSRFSAFLIEASVTVPL 1175
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTA-EKHNQWK-GLFGRLDWEGNFPTSVTDPHPMGMV 161
+P +D + LP+E P A QWK +GR+D +G F ++T P
Sbjct: 1176 RPYADHKALPTE--------LQPTYAMAGRKQWKHSFYGRMDGDGQFKCTMTRASPNLKN 1227
Query: 162 GTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
HP+Q R+I++RECARSQGF D + F +H
Sbjct: 1228 SWLLHPHQKRMISIRECARSQGFPDGFIFESSNEH 1262
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLW-FQKKIRGDMLVLNDHISK 88
PF +TV D IGDLP + NG G++ K P L +Q+ +R D +L +H +
Sbjct: 286 PF--VTVIDAIGDLPKLTNGGGENVGRYGYN---KDAPQLSKYQQNMRSDGELLANHWCR 340
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
A+ N R + IP G DWR +P DL+P + K + + +GRL
Sbjct: 341 ALYPPNTERIKHIPA--GGDWRSIPR----DLLPPGMQRALRKDHTKR--YGRLSPTQLA 392
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T +T P P + Q R+I+VRE AR Q F D + F G
Sbjct: 393 GTLLTKPDPHWGTFIHYDLAQQRLISVREAARIQSFPDRHVFYG 436
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 9 LKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPV 68
L +KL V + + APF+ I++ D I DLP A + G Y + P+
Sbjct: 979 LALKLTNGGMALPVLTGSGLAPFKYISIDDAISDLPREIPKAFLAAGIGGVVRIYLNSPI 1038
Query: 69 LWFQ----KKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC 124
+ KK R H ++ + + + R +IP + +D+ L E L W
Sbjct: 1039 VVMNQSLYKKCREKGTRDLQHFTRVLPDKVIQRVVEIPLEARADYTRLREE----LWEWQ 1094
Query: 125 L--PNTAEKHNQWK-GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
P +A + ++ GL+GRLD F T+VT+ P +P R++TVRE ARS
Sbjct: 1095 FSNPTSAVARDGFRAGLYGRLDKNEWFQTTVTNVEPTAKQSRVLNPYCKRVVTVRELARS 1154
Query: 182 QGFSDSYKFVGD 193
QGF D + F +
Sbjct: 1155 QGFPDHFVFYAE 1166
>gi|302693254|ref|XP_003036306.1| hypothetical protein SCHCODRAFT_81552 [Schizophyllum commune H4-8]
gi|300110002|gb|EFJ01404.1| hypothetical protein SCHCODRAFT_81552 [Schizophyllum commune H4-8]
Length = 253
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 21 AVRSTANGAPFRAITVRDTIGDL--------------------PAVGNGASVTTMEVGFS 60
AV A AP +A+T+ D IGDL PA G G +G+
Sbjct: 14 AVNPGAGRAPHKAVTIGDAIGDLRRFHWEQQPDHRVNDGIPLLPADGIG------RIGYV 67
Query: 61 SP---YKSEPVLWFQKKIR-----GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL 112
SP Y+ P FQ R GD+ H + +E + IP +P +D R L
Sbjct: 68 SPEDAYEHAPRTTFQANARRKPATGDI----QHYTAQFNEETAKKVVGIPMEPNADARHL 123
Query: 113 PSEKVVDLIPWCLPNTAEKHNQW---KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQ 169
P + L N + Q K FGRLD + F T T P C +P
Sbjct: 124 PRAHHT----FMLHNPMSANGQAGFNKAYFGRLDEKALFMTITTQMKPTAKQSRCLNPWC 179
Query: 170 DRIITVRECARSQGFSDSYKF 190
R+ITVRE AR+QGF D + F
Sbjct: 180 RRVITVRELARAQGFPDDFVF 200
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DMLV------- 81
+A+ + D+I DLP V N E PY+ P FQ +IR D V
Sbjct: 697 KALFLGDSISDLPPVKN------CETRDEIPYRDGPKTEFQTRIRSARDDFTVFYGRGPR 750
Query: 82 -----LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK 136
++DH +++ + R +IPK+ G+++R L K+ D L T E+
Sbjct: 751 AMNSTVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIKDDNSVTLDLTVEREYLPS 810
Query: 137 GL------------------FGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVR 176
G F R+ W+ PT +T +PH M+ HP QDR++TVR
Sbjct: 811 GKPLIPDYAISFIKGRSLKPFARMWWDETVPTVITRAEPHNHRML----HPTQDRVLTVR 866
Query: 177 ECARSQGFSDSYKFVGDIQH 196
E AR QGF D YK G ++
Sbjct: 867 ENARLQGFPDWYKLTGSVKE 886
>gi|224031943|gb|ACN35047.1| unknown [Zea mays]
Length = 329
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D DLP V N ME G S P FQ+ IR DML
Sbjct: 72 KALLLGDAFSDLPKVENHQPNDVMEYGGS------PKTEFQRYIRLGRKDMLDWSFGEEA 125
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R ++IP + G+++R L KV +++ W
Sbjct: 126 GPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVYLS 185
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 186 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--ILHPTQARVLTIRE 243
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 244 NARLQGFPDYYRLFGPIKE 262
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 5 TGPELKVKLARNSHYAAVRST-ANGAPFRAITVRDTIGDLP------------------- 44
TG L + H +A RS A AP AITV D IGDL
Sbjct: 963 TGEVLHRPVRVAPHESAKRSEYAQYAPLCAITVEDAIGDLQKFDWLPSGPLTDEDIHRLA 1022
Query: 45 -AVGNGASVTTMEVGF--------SSPYKSEPVLWFQKKIRGDMLVLND---HISKAMSE 92
+ +VT E F + + P+ +Q + R + V ++ H ++ S
Sbjct: 1023 QGIVRFEAVTNREARFPYAGYCGKGTAFLHPPLNRYQMQAREGLDVDDNVVYHYTQKFSA 1082
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+ R +P + G++ + LP + PN K +++ + R+D + +F T +
Sbjct: 1083 KIVDRVLHVPLRAGANHQDLPPQYRDKR--KLQPNGKSK-KEYERHYKRIDRDSHFMTML 1139
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T P G HP Q R++T+RECAR+QGF DS+KF+
Sbjct: 1140 TTVKPSGTNAIVLHPTQKRVLTIRECARAQGFPDSHKFLS 1179
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--------------- 76
+A+ + D I DLP V N E G S P FQ+ IR
Sbjct: 526 KALLLGDAISDLPKVQNHQPNDVXEYGGS------PKTEFQRYIRLSRKDXLDWSFGEGA 579
Query: 77 -GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
D L DH ++ + R Q+IP + G+++R L +V +++ W
Sbjct: 580 GPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLS 639
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 640 SGKPLVPDYAXSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRE 697
Query: 178 CARSQGFSDSYKFVGDIQ 195
AR QGF D Y+ G I+
Sbjct: 698 NARLQGFPDYYRLFGPIK 715
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 82/190 (43%), Gaps = 39/190 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-------GDML------ 80
+ +RD I DLPAV N + PY +PV FQ+ IR G +
Sbjct: 599 LLLRDVISDLPAVDNSEQRDEI------PYDQDPVTPFQQFIRLRKDEALGSLTKSKSKK 652
Query: 81 -VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIP----------WC 124
VL DH ++ + R ++PK+ G+++R P VV L
Sbjct: 653 HVLYDHHPLNLNINDYQRVCRVPKRKGANFRDFPGVIVGPGNVVHLDEDMKIMLQSGKQL 712
Query: 125 LPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+PN A FGRL W+ PT VT P V HP QDR++++RE AR Q
Sbjct: 713 VPNYALTFVDGTSSKPFGRLWWDEIVPTVVTRAEPHNQV--IIHPTQDRVLSIRENARLQ 770
Query: 183 GFSDSYKFVG 192
GF D YK G
Sbjct: 771 GFPDDYKLFG 780
>gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
Length = 387
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 25/169 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+RD IGDLP++GN + Y +P +Q +RG+ L +H+S+ +
Sbjct: 210 FNLRDAIGDLPSLGNNDR--------ADQYVEDPQTDYQILMRGNQDQLFNHVSRNHGQ- 260
Query: 94 NLIRCQKI-----PKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
R QKI Q +D + + ++D + + + +GRL W+
Sbjct: 261 ---RLQKIMAALKEGQGKNDINRMVEDGLLDRVLYLTSG-------YSNTYGRLWWDRP- 309
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T++T+ C HP+Q+R +T RE AR Q F D+YKFVG +Q I
Sbjct: 310 STTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQAI 358
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLW-FQKKIRGDMLVLNDHISKAMSE 92
+TV+D IGDLP + NG E+G PV +Q+ +R + H + +S+
Sbjct: 210 VTVKDAIGDLPVLRNG------EIGEPVKDYRHPVDNPYQQLMRVGSTGVTCHEAARLSK 263
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP PG +W +P L+P + A + + K +GR++ +G T +
Sbjct: 264 INLERMAHIP--PGGNWTDIPEA----LLPRGM-RMARRSDHTK-RYGRVNPDGLASTIL 315
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F D+Y F G
Sbjct: 316 TKCDPH----WGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 353
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D DLP V N ME G S P FQ+ IR DML
Sbjct: 658 KALLLGDAFSDLPKVENHQPNDVMEYGGS------PKTEFQRYIRLGRKDMLDWSFGEEA 711
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R ++IP + G+++R L KV +++ W
Sbjct: 712 GPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVYLS 771
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 772 SGKPLVPDYAMSFIKGKSLKPFGRLWWDQTVPTVVTRAEPHNQV--ILHPTQARVLTIRE 829
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 830 NARLQGFPDYYRLFGPIKE 848
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D DLP V N ME G S P FQ+ IR DML
Sbjct: 658 KALLLGDAFSDLPKVENHQPNDVMEYGGS------PKTEFQRYIRLGRKDMLDWSFGEEA 711
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R ++IP + G+++R L KV +++ W
Sbjct: 712 GPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVYLS 771
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 772 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--ILHPTQARVLTIRE 829
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 830 NARLQGFPDYYRLFGPIKE 848
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D DLP V N ME G S P FQ+ IR DML
Sbjct: 658 KALLLGDAFSDLPKVENHQPNDVMEYGGS------PKTEFQRYIRLGRKDMLDWSFGEEA 711
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW---------- 123
L DH ++ + R ++IP + G+++R L KV +++ W
Sbjct: 712 GPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVYLS 771
Query: 124 ----CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A + K L FGRL W+ PT VT P V HP Q R++T+RE
Sbjct: 772 SGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQV--ILHPTQARVLTIRE 829
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D Y+ G I+
Sbjct: 830 NARLQGFPDYYRLFGPIKE 848
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI---RGDML-------- 80
+ + + D I DLP V N + M PY +P FQK I + DM
Sbjct: 361 KELYLGDAISDLPPVPNDEARDEM------PYGEKPKTEFQKFISLKKTDMPGFVGSGQD 414
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-----------VD--LIPW 123
+L DH +++ + R +IPK+ G+++R L +V VD IP
Sbjct: 415 ASDHLLYDHRPLKLNDDDYQRVCQIPKKKGANFRDLKGVRVKADNHVEWDPDVDRVYIPS 474
Query: 124 CLPNTAEKHNQWKG-----LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
P + + G FGRL W+ PT VT P HP QDR++T+RE
Sbjct: 475 GKPLVPDYAMTFVGGRSEKPFGRLWWDDTVPTVVTRAEPHNQ--AILHPLQDRVLTIREN 532
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK +G I+
Sbjct: 533 ARLQGFPDYYKLLGPIKE 550
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-------------GD 78
+++ + D I DLPAV N M PY P FQ+ IR
Sbjct: 722 KSLFLDDAISDLPAVANNEERDEM------PYGVAPKTEFQRLIRLSKEYLMGTSKDNSI 775
Query: 79 MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--DLIPW------------- 123
VL DH ++ + R ++PK+ G+ +R LP +V + + W
Sbjct: 776 QNVLYDHRPLQLNPDDYARVCEVPKRKGACFRDLPGVRVRGDNKVEWDPEVPRVYLASGK 835
Query: 124 -CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A + F RL W+ PT VT +PH ++ HP QDR++T+RE
Sbjct: 836 PLIPDYAMSFVNGSSSKPFARLWWDETVPTVVTRAEPHNQAIM----HPEQDRVLTIREN 891
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G I+
Sbjct: 892 ARLQGFXDFYKLSGPIKE 909
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFS-SPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TV+D IGDLP + NG E+G Y+ +Q+ +R + H + +S+
Sbjct: 225 VTVKDAIGDLPKLRNG------EMGEPVKDYRHPADNPYQQLMRVGSTGVTCHEAARLSK 278
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R IP PG +W +P L+P + A + + K +GR++ +G T +
Sbjct: 279 INLERMTHIP--PGGNWTDIPDA----LLPSGM-RLARRSDHTK-RYGRVNPDGLASTIL 330
Query: 153 T--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T DPH G FH QDR TVRE AR Q F DSY F G
Sbjct: 331 TKCDPH----WGAYFHYEQDRAFTVREAARIQSFPDSYVFCG 368
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++++V++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PLKSVSVKEAISDL------AYLNSNEGAFESSYLNPIQSNYQALMRKDSTRLYNHKATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S++ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQVALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T + GT HP R IT RE AR Q FSDSY F G+ I ++
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDSYIFYGNKTSICKQI 333
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 41/197 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-------------- 77
+ I + D + DLP V NG M Y P FQ+ IR
Sbjct: 1190 KPIVLEDALSDLPEVENGEKREEML------YMKGPQTEFQRYIRSFNSEVLGSRAHVIK 1243
Query: 78 -DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPW----CLPN 127
L DH +A+ N +R +IPK+ G+++R LP + + L P LP+
Sbjct: 1244 VSKSKLFDHRPRALDVDNYLRVLQIPKKKGANFRDLPGVIVGPDNIARLDPTKERILLPS 1303
Query: 128 ---------TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
A K+ + +GRL W+ T +T P+ + HP QDR++T+RE
Sbjct: 1304 GNPLVVDCVLAYKNGKSLRPYGRLWWDEVVGTVLTCPN--AHMQALIHPAQDRLLTIRES 1361
Query: 179 ARSQGFSDSYKFVGDIQ 195
AR QGF DS++F G ++
Sbjct: 1362 ARLQGFPDSFRFRGTVK 1378
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
PF +TV D I DLP + NG + PY P +Q +RGD ++ +H +
Sbjct: 195 PF--VTVWDAISDLPKLENG------DRAGPRPYGKRPQNSYQALLRGDCTIVQNHSASR 246
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S +N R + IP G WR +P +DL+P + A++ + K +GR
Sbjct: 247 LSRINQERMRHIPA--GGSWRDIP----IDLLPAGM-KLAKRSDHTK-RYGRPKKTDLSC 298
Query: 150 TSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T +T D H G HP QDR TVRE AR Q F D + F G+
Sbjct: 299 TVLTKCDVH----WGAYIHPVQDRSFTVREAARLQSFPDFFTFKGN 340
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 29 APFRAITVRDTIGDLPAVG-----------------------------NGASVTTMEVGF 59
AP +T+ D IGDLP +T VGF
Sbjct: 1175 APLPPVTIEDAIGDLPPFDWVNPHEIFPSSTKDRNECKAREDAGIKQLVATPTSTGLVGF 1234
Query: 60 SSP--YKSEPVLWFQKKIRGDML--VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE 115
P Y P +Q ++R + VLN + S L + R +P +P +D+R LP
Sbjct: 1235 PRPSEYHCPPQNRYQLQMRRNSPGGVLNMYTRTYRSSL-VERVVTVPLEPDADFRRLPE- 1292
Query: 116 KVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITV 175
+ + + +G FGR +G F T +T P+P HP Q R TV
Sbjct: 1293 ---------ILQPGGQREKRRGSFGRCGLKGFFATVMTQPNPSSKGTWLLHPTQKRTYTV 1343
Query: 176 RECARSQGFSDSYKF 190
RECARSQ F D ++F
Sbjct: 1344 RECARSQSFPDDFEF 1358
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 45/207 (21%)
Query: 25 TANG-APFRAITVRDTIGDLPAV----------GNGAS-----VTTMEV---------GF 59
TANG APF+ ++ ++ I DLP +G S V T+E G
Sbjct: 988 TANGTAPFKFVSTKEAIEDLPVFDWRDPHKIMRSSGTSHTREGVLTLECDVEQQPRGCGL 1047
Query: 60 SSPYKSEPVLW--------FQKKIRGDMLVLNDHISKAM-----SELNLIRCQKIPKQPG 106
+ P S + + FQ + R HI++ +++ L R IP + G
Sbjct: 1048 TGPCPSRSLSYRFDKPRNSFQARCRSRPTRDLQHITRVTPACTRTDIYLNRVVNIPLRAG 1107
Query: 107 SDWRVLPSEKVVDLIPW--CLPNTAEKHNQWK-GLFGRLDWEGNFPTSVTDPHPMGMVGT 163
+D+R L + L W P +A + ++ G++GRLD + F T+VT+ P
Sbjct: 1108 ADYRELNAR----LWEWQSAHPTSAMARDGFRPGMYGRLDEDKWFHTTVTNVSPTAKQSR 1163
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKF 190
HP RI+TVRE ARSQGF D + F
Sbjct: 1164 VIHPTSKRILTVRELARSQGFPDWFVF 1190
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK--KIRGDML----VLNDHIS 87
+ + D I DLP V N + M PY P FQ+ ++R + L +L DH
Sbjct: 722 LLLADAISDLPPVTNDEARDEM------PYGKAPQTEFQRFIRLRKNGLQTNSLLYDHRP 775
Query: 88 KAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD--------LIPWCLPNTAEKHNQ 134
++ + R +IPK G+++R LP ++ V+ +P P +
Sbjct: 776 LELNADDYQRVCQIPKTKGANFRDLPGVLVGADNKVEWDPNVERIYLPSGKPLVPDYAMS 835
Query: 135 WKG-----LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+ G FGRL W+ PT VT P V HP QDR++++RE AR QGF D Y+
Sbjct: 836 FVGGSSSKPFGRLWWDETVPTVVTRAEPHNQV--ILHPEQDRVLSIRENARLQGFPDYYQ 893
Query: 190 FVGDIQH 196
G ++
Sbjct: 894 LRGPVKE 900
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P + ++V++ I DL A + + E F S Y +Q +R + L +H +
Sbjct: 184 PLQIVSVKEAISDL------AYLNSNEGAFESDYSKPIQSTYQALMRKNSNKLYNHKATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
SE+ L + + IP + G + CLP Q+K +GRL W+ P
Sbjct: 238 HSEIALEKLKLIPNEQGKE---------------CLPKNLHGKQQFKSTWGRLSWDKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T + GT HP R IT RE AR Q FSD Y F G+ I ++
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSICKQI 333
>gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group]
gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group]
gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group]
Length = 304
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML----------- 80
R I + D + DLP V NG S M Y P FQ+ IR +
Sbjct: 63 RPIVLEDILSDLPEVANGESRDEML------YVKGPQTEFQRYIRSFNVEVHGPRAHVTK 116
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVVDLI 121
L DH + N R +IPK+ G+++R L P+++ V L+
Sbjct: 117 DSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERV-LL 175
Query: 122 PWCLPNTAE---KHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
P P + + K L FGR+ W+ T +T P+ + HP QDR++T+R
Sbjct: 176 PSGRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQDRLLTIR 233
Query: 177 ECARSQGFSDSYKFVGDIQ 195
E AR QGF D+Y+F G ++
Sbjct: 234 ESARLQGFPDNYRFRGTVK 252
>gi|152973178|ref|YP_001338324.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150958027|gb|ABR80057.1| putative site-specific DNA methylas [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 350
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
ITVR I DLPA+ G + + GD L H++ +SE
Sbjct: 185 ITVRQAISDLPALKAGETSS-----------------------GDKL----HVTSTLSEK 217
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + +PG WR P V D + +K + ++GR++W+ PT T
Sbjct: 218 NLQRIKA--SKPGGTWRDWPEHLVADC------HRTDKGKTYSSVYGRMEWDKPAPTMTT 269
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH----IIGRL 201
+ G G HP QDR I++RE A Q F Y F+ D + ++GR+
Sbjct: 270 QCYGFGN-GRFGHPEQDRAISLREAAILQSFPQDYVFIPDDSNVNLRVLGRM 320
>gi|384888707|ref|YP_005763009.1| modification methylase [Helicobacter pylori v225d]
gi|297379273|gb|ADI34160.1| Modification methylase [Helicobacter pylori v225d]
Length = 222
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y S +Q +R D L +H +
Sbjct: 51 PSQSVNVQDAISDL------AYLCSNEGAFESDYLSPIQSSYQALMRKDSPKLYNHQATN 104
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 105 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 149
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 150 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 192
>gi|359801979|gb|AEV66402.1| DNA (cytosine-5)-methyltransferase 1-like protein [Equus caballus]
Length = 97
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
+ + LIPWCLP+T +HN W GL+GRL+W+G F T+VT+P PMG
Sbjct: 9 ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 54
>gi|242316067|ref|ZP_04815083.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b]
gi|242139306|gb|EES25708.1| modification methylase HgiDII [Burkholderia pseudomallei 1106b]
Length = 349
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +SE NL R + +PG WR P DLI C + AE + G++GR++W
Sbjct: 214 HVASTLSEKNLQRIKV--SKPGGTWRDWPE----DLIAEC--HRAESGRTYPGVYGRMEW 265
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQH-IIGR 200
+ PT T + G G HP QDR I++RE A Q F Y FV G++ ++GR
Sbjct: 266 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPRDYAFVPKDGEVSFTVLGR 324
Query: 201 L 201
L
Sbjct: 325 L 325
>gi|121594541|ref|YP_986437.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
gi|120606621|gb|ABM42361.1| DNA-cytosine methyltransferase [Acidovorax sp. JS42]
Length = 366
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +SE NL R + +PG WR P + V D + AE + G++GR++W
Sbjct: 228 HVTSTLSEKNLKRIKV--SKPGGTWRDWPDDLVADC------HRAESGRTYPGVYGRMEW 279
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEML 204
+ PT T + G G HP QDR I++RE A Q F Y FV D E+
Sbjct: 280 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPRDYAFVPDDG------EVS 332
Query: 205 FHLLWRL 211
F +L RL
Sbjct: 333 FKVLGRL 339
>gi|167851523|ref|ZP_02477031.1| DNA-cytosine methyltransferase [Burkholderia pseudomallei B7210]
Length = 352
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +SE NL R + +PG WR P E V D + AE + G++GR++W
Sbjct: 214 HVTSTLSEKNLRRIKV--SKPGGTWRDWPDELVADC------HRAESGRTYPGVYGRMEW 265
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQ-HIIGR 200
+ PT T + G G HP QDR I++RE A Q F Y F+ G++ ++GR
Sbjct: 266 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPRDYAFIPANGEVSFKVLGR 324
Query: 201 L 201
L
Sbjct: 325 L 325
>gi|126453573|ref|YP_001067912.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a]
gi|126227215|gb|ABN90755.1| modification methylase HgiDII [Burkholderia pseudomallei 1106a]
Length = 344
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +SE NL R + +PG WR P DLI C + AE + G++GR++W
Sbjct: 209 HVASTLSEKNLQRIKV--SKPGGTWRDWPE----DLIAEC--HRAESGRTYPGVYGRMEW 260
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQH-IIGR 200
+ PT T + G G HP QDR I++RE A Q F Y FV G++ ++GR
Sbjct: 261 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPRDYAFVPKDGEVSFTVLGR 319
Query: 201 L 201
L
Sbjct: 320 L 320
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
A+TVRD I DLP +G+G + + P +++ +Q++ RGD+ L H + S+
Sbjct: 223 ALTVRDAIDDLPPIGSGEAAER----YDRPARTD----YQRERRGDVAELTWHCATRHSD 274
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT-S 151
+ +I K G + +P + C + RL+ + PT +
Sbjct: 275 ----KMMEIIKHSGPNISYIPKHLITSGFSSC--------------YSRLEADEAAPTIT 316
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
V HP C HPN DR +T RE AR Q F D+++F G ++ + +
Sbjct: 317 VNFVHPAS--NKCIHPNLDRALTPREGARIQSFDDNFRFAGTNRNAVAK 363
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML---------- 80
+ + D I DLP V N + M PY P FQ+ IR +ML
Sbjct: 578 LLLADAISDLPPVTNDEARDEM------PYGKAPQTEFQRFIRLRKNEMLGTSPSESNPS 631
Query: 81 --VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD--------LIPWCL 125
L DH ++ + R +IPK G+++R LP ++ V+ +P
Sbjct: 632 GNKLYDHRPLELNADDYQRVCQIPKTKGANFRDLPGVLVGADNKVEWDPNVERIYLPSGK 691
Query: 126 PNTAEKHNQWKG-----LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
P + + G FGRL W+ PT VT P V HP QDR++++RE AR
Sbjct: 692 PLVPDYAMSFVGGSSSKPFGRLWWDETVPTVVTRAEPHNQV--ILHPEQDRVLSIRENAR 749
Query: 181 SQGFSDSYKFVGDIQH 196
QGF D Y+ G ++
Sbjct: 750 LQGFPDYYQLRGPVKE 765
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I DLP + +G S Y +P QK +RG VL++H++ S +
Sbjct: 183 TVRDAIYDLPFIESGQGEE------ESTYDKQPTTDLQKDLRGKCKVLHNHVATNHSPVA 236
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + +P G +VLP E+ I + G + RL E ++T
Sbjct: 237 LRRMEMVPI--GEGGKVLPQEERTKSI-------------YSGTWCRL-LENEVAATITT 280
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+ G HP +R IT RE AR Q F DS+ F G+
Sbjct: 281 RYDTPSSGRFTHPLLNRCITTREAARIQTFPDSFIFYGN 319
>gi|17225547|gb|AAL37468.1|AF328924_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 234
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++++V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 63 PSQSVSVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 116
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 117 HSQAALEKLKLINKEKGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 161
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 162 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 204
>gi|238892833|ref|YP_002917567.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402782665|ref|YP_006638211.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238545149|dbj|BAH61500.1| putative site-specific DNA methylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402543514|gb|AFQ67663.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 350
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
ITVR I DLPA+ G + + GD L H++ +SE
Sbjct: 185 ITVRQAISDLPALKAGETSS-----------------------GDKL----HVTSTLSEK 217
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + +PG WR P V D + ++ + ++GR++W+ PT T
Sbjct: 218 NLQRIKA--SKPGGTWRDWPEHLVADC------HRTDRGKTYSSVYGRMEWDKPAPTMTT 269
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH----IIGRL 201
+ G G HP QDR I++RE A Q F Y F+ D + ++GR+
Sbjct: 270 QCYGFGN-GRFGHPEQDRAISLREAAILQSFPQDYVFIPDDSNVNLRVLGRM 320
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 24/159 (15%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ V+D I DL A + + + +SPYK+ P +QK +RG+ +L H + S++
Sbjct: 190 VCVKDAISDL------AYLQSNQGEITSPYKNPPQSAYQKMLRGE--ILQYHKASNHSQI 241
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ + + IPK+ G ++ LP ++ +GRL W PT +
Sbjct: 242 AIKKLEMIPKEKGKEY---------------LPKNLHGKQKFNTTWGRLKWNEISPT-ID 285
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
GT HP R IT RE AR Q FSDS+ F+G
Sbjct: 286 TRFDTPSNGTNSHPFLHRSITPREAARIQSFSDSFIFLG 324
>gi|384199186|ref|YP_005584929.1| DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|320458138|dbj|BAJ68759.1| DNA methylase [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
Length = 349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ ++ LNL R Q +PG W+ P E +++ C T + +K +GR++W
Sbjct: 208 HFARNLTPLNLRRIQA--SEPGGTWKDWPEELLLE----CQKKTT--GSTFKSFYGRMEW 259
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T + G G HP QDR +T+RE +R QGF DS+ F + I +GR
Sbjct: 260 DKPSPTITTQSYNPG-TGRFTHPEQDRTLTLREASRLQGFPDSFMFTKPGEPITFTNVGR 318
Query: 201 L 201
L
Sbjct: 319 L 319
>gi|168698288|ref|ZP_02730565.1| cytosine-specific methyltransferase [Gemmata obscuriglobus UQM
2246]
Length = 293
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLW-FQKKIRGDMLVLNDHISKAMSE 92
+TV++ IGDLP + GA++ + PY S L +Q ++R + + ++ S
Sbjct: 91 VTVQEAIGDLPRLSAGAAIDIL------PYPSRSKLSDYQLRMRRGSVSVQGNLVTKNSP 144
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
L L R + I +PG +W +P+ L N ++ G++ RL N P+ V
Sbjct: 145 LVLKRYEVI--RPGQNWESIPNR--------LLKNYSDASRCHTGIYYRL--VANQPSKV 192
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
M+ HP+Q R ++VRE AR Q F D+Y+F G I
Sbjct: 193 IGNFRKNML---IHPSQHRGLSVREAARIQSFPDAYQFTGSI 231
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 87/218 (39%), Gaps = 45/218 (20%)
Query: 23 RSTANGAPFRAITVRDTIGDLP-------------------------AVGNGASVTTMEV 57
R GAP +TV+D IGDLP AV T
Sbjct: 1066 RDALGGAPLPCVTVKDVIGDLPEWHWINPKKLMPRPVVPKPAGPHFDAVTYDRKTRTCGY 1125
Query: 58 GFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPK-------QPGSDWR 110
PY + P +QK++RG+ + H + ++ R +P+ G D+R
Sbjct: 1126 AGFVPYATLPATAYQKELRGNRKGVRYHSTLTYVGESVERVCNVPRPKGDKCLDAGRDYR 1185
Query: 111 VLPSEKVVDLIPW---CLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP 167
L V W C + A + +G + R+ + T +T P G G H
Sbjct: 1186 ELDGRFSV----WHLTCPHSRAARGGYGEGKYARVYPDRPARTVLTRNEPTGKQGRVLHY 1241
Query: 168 NQDRIITVRECARSQGFSDSYKFVG------DIQHIIG 199
NQ+R+++ +E AR QGF+D++ F+ DI +IG
Sbjct: 1242 NQNRVLSAQENARLQGFADTFTFISGTDDLRDIMRLIG 1279
>gi|213692027|ref|YP_002322613.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213523488|gb|ACJ52235.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 354
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ ++ LNL R Q +PG W+ P E +++ C T + +K +GR++W
Sbjct: 213 HFARNLTPLNLRRIQA--SEPGGTWKDWPEELLLE----CQKKTT--GSTFKSFYGRMEW 264
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T + G G HP QDR +T+RE +R QGF DS+ F + I +GR
Sbjct: 265 DKPSPTITTQSYNPG-TGRFTHPEQDRTLTLREASRLQGFPDSFMFTKPGEPITFTNVGR 323
Query: 201 L 201
L
Sbjct: 324 L 324
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK--KIRGDML----------- 80
+ ++D I DLPAV N + Y +P FQK ++R D
Sbjct: 599 LLLKDVISDLPAVANSEKRDEIT------YDKDPTTPFQKFIRLRKDEASGSQSKSKSKK 652
Query: 81 -VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKV-VDLIPW 123
VL DH ++ + R ++PK+ G+++R P E+V ++
Sbjct: 653 HVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKT 712
Query: 124 CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+P+ A + K FGRL W+ PT VT P V HP Q+R++++RE AR
Sbjct: 713 LVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARL 770
Query: 182 QGFSDSYKFVG 192
QGF D YK G
Sbjct: 771 QGFPDDYKLFG 781
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-------------- 77
R I + D + DLP V NG S M Y P FQ+ IR
Sbjct: 949 RPIVLEDILSDLPEVANGESRDEML------YVKGPQTEFQRYIRSFNVEVHGPRAHVTK 1002
Query: 78 --DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVVDLI 121
L DH + N R +IPK+ G+++R L P+++ V L+
Sbjct: 1003 DSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERV-LL 1061
Query: 122 PWCLPNTAE---KHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
P P + + K L FGR+ W+ T +T P+ + HP QDR++T+R
Sbjct: 1062 PSGRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQDRLLTIR 1119
Query: 177 ECARSQGFSDSYKFVGDIQ 195
E AR QGF D+Y+F G ++
Sbjct: 1120 ESARLQGFPDNYRFRGTVK 1138
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK--KIRGDML----------- 80
+ ++D I DLPAV N + Y +P FQK ++R D
Sbjct: 599 LLLKDVISDLPAVANSEKRDEIT------YDKDPTTPFQKFIRLRKDEASGSQSKSKSKK 652
Query: 81 -VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKV-VDLIPW 123
VL DH ++ + R ++PK+ G+++R P E+V ++
Sbjct: 653 HVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKT 712
Query: 124 CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+P+ A + K FGRL W+ PT VT P V HP Q+R++++RE AR
Sbjct: 713 LVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARL 770
Query: 182 QGFSDSYKFVG 192
QGF D YK G
Sbjct: 771 QGFPDDYKLFG 781
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK--KIRGDML----------- 80
+ ++D I DLPAV N + Y +P FQK ++R D
Sbjct: 599 LLLKDVISDLPAVANSEKRDEIT------YDKDPTTPFQKFIRLRKDEASGSQSKSKSKK 652
Query: 81 -VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKV-VDLIPW 123
VL DH ++ + R ++PK+ G+++R P E+V ++
Sbjct: 653 HVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKT 712
Query: 124 CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+P+ A + K FGRL W+ PT VT P V HP Q+R++++RE AR
Sbjct: 713 LVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARL 770
Query: 182 QGFSDSYKFVG 192
QGF D YK G
Sbjct: 771 QGFPDDYKLFG 781
>gi|429768004|ref|ZP_19300180.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
gi|429189569|gb|EKY30396.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
Length = 445
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEP--VLWFQKKIRGDMLVLNDHISKAMSE 92
TV IGDLPA+ NG S Y S+P + +Q+ R +L +H + +
Sbjct: 252 TVEAAIGDLPALTNGGGDDL------SHYTSKPGALTAYQENARAHASMLANHWCRELVG 305
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
N+ R + IP G DWR +P E L+P + K + + +GRL + T +
Sbjct: 306 PNIERVKHIPV--GGDWRSIPRE----LLPPGMQRALRKDHTKR--YGRLSPDEQASTLL 357
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T P P + +Q R+I+VRE AR Q F D + F G
Sbjct: 358 TKPDPHWGKFIHYDVSQQRLISVREAARLQSFPDHHVFCG 397
>gi|317483226|ref|ZP_07942221.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp.
12_1_47BFAA]
gi|316915295|gb|EFV36722.1| C-5 cytosine-specific DNA methylase [Bifidobacterium sp.
12_1_47BFAA]
Length = 349
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ ++ LNL R Q +PG W+ P E +++ C T + +K +GR++W
Sbjct: 208 HFARNLTPLNLRRIQA--SKPGGTWKDWPEELLLE----CQKKTT--GSTFKSFYGRMEW 259
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T + G G HP QDR +T+RE +R QGF DS+ F + I +GR
Sbjct: 260 DKPSPTITTQSYNPG-TGRFTHPEQDRTLTLREASRLQGFPDSFMFTKPGEPITFTNVGR 318
Query: 201 L 201
L
Sbjct: 319 L 319
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK--KIRGDML----------- 80
+ ++D I DLPAV N + Y +P FQK ++R D
Sbjct: 599 LLLKDVISDLPAVANSEKRDEIT------YDKDPTTPFQKFIRLRKDEASGSQSKSKSKK 652
Query: 81 -VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP---------------SEKV-VDLIPW 123
VL DH ++ + R ++PK+ G+++R P E+V ++
Sbjct: 653 HVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKT 712
Query: 124 CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+P+ A + K FGRL W+ PT VT P V HP Q+R++++RE AR
Sbjct: 713 LVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARL 770
Query: 182 QGFSDSYKFVG 192
QGF D YK G
Sbjct: 771 QGFPDDYKLFG 781
>gi|386745575|ref|YP_006218792.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
gi|384551824|gb|AFI06772.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
Length = 650
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 479 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 532
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 533 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 577
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 578 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 620
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ TVRD I DL + +G E F Y ++P +Q K+R L +H + +
Sbjct: 532 KVTTVRDAIFDLAYLNSG------EGAFEQDYTTQPSSDYQTKMRKGAKKLYNHKASNHA 585
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E+ + + IP + G ++ LP Q+ G +GRL W+ PT
Sbjct: 586 EIAIKKLSLIPPECGKEY---------------LPEDMIGKQQFSGTWGRLKWDEPSPT- 629
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ GT HP +R IT RE AR Q F D + F+G
Sbjct: 630 IDTRFDASSNGTNNHPFLNRAITPREAARLQSFDDKFVFIG 670
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N M PY FQ+ IR DM+
Sbjct: 580 KALFLGDAISDLPPVTNYNGQDEM------PYNKAAHTEFQRYIRLRKHDMVYCSDAEKD 633
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD--------LIP 122
+L DH ++E + R +IPK+ G+++R LP S+ V+ L+P
Sbjct: 634 ASEPPMLYDHRPLQLNEDDNERVCRIPKKKGANFRDLPGVMVGSDNRVEWDPSMERVLLP 693
Query: 123 W---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITV 175
+P+ A + K F RL W+ T VT +PH ++ HP QDR++T+
Sbjct: 694 SGKPLVPDYAMSFVRGKSTKPFARLWWDEIVATVVTRAEPHNQAII----HPTQDRVLTI 749
Query: 176 RECARSQGFSDSYKFVGDIQH 196
RE AR QGF D YK G ++
Sbjct: 750 RENARFQGFPDCYKLCGPVKE 770
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-------GDML----- 80
A+ + D I DLP V N + E + +P ++E FQ+ IR G M
Sbjct: 587 ALLLDDAISDLPPVTNDENQD--ERNYGAPARTE----FQRYIRLKKNEMVGSMATAQST 640
Query: 81 ---VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS--------------EKV-VDLIP 122
+L DH +++ + R +IP++ G+++R LP E+V +D
Sbjct: 641 PRRILYDHRPLQLNKDDYDRVCQIPQKKGANFRDLPGVLVNGNKVEWDPSVERVMLDSGK 700
Query: 123 WCLPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
+P+ A + FGRL W+ PT VT P HP Q+R++T+RE AR
Sbjct: 701 PLVPDYAMTFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQA--ILHPRQNRVLTIRENAR 758
Query: 181 SQGFSDSYKFVGDIQH 196
QGF D YK G ++
Sbjct: 759 LQGFPDCYKLCGPVKE 774
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N M PY FQ+ IR DM+
Sbjct: 582 KALFLGDAISDLPPVTNYNGQDEM------PYNKAAHTEFQRYIRLRKHDMVYCSDAEKD 635
Query: 81 -----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP-----SEKVVD--------LIP 122
+L DH ++E + R +IPK+ G+++R LP S+ V+ L+P
Sbjct: 636 ASEPPMLYDHRPLQLNEDDNERVCRIPKKKGANFRDLPGVMVGSDNRVEWDPSMERVLLP 695
Query: 123 W---CLPNTAEKHNQWKGL--FGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITV 175
+P+ A + K F RL W+ T VT +PH ++ HP QDR++T+
Sbjct: 696 SGKPLVPDYAMSFVRGKSTKPFARLWWDEIVATVVTRAEPHNQAII----HPTQDRVLTI 751
Query: 176 RECARSQGFSDSYKFVGDIQH 196
RE AR QGF D YK G ++
Sbjct: 752 RENARFQGFPDCYKLCGPVKE 772
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
Length = 355
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
SE L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSEAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-------------- 77
R I + D + DLP V NG S M Y P FQ+ IR
Sbjct: 1084 RPIVLEDILSDLPEVANGESRDEML------YVKGPQTEFQRYIRSFNVEVHGPRAHVTK 1137
Query: 78 --DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVVDLI 121
L DH + N R +IPK+ G+++R L P+++ V L+
Sbjct: 1138 DSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERV-LL 1196
Query: 122 PWCLP---NTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
P P + + K L FGR+ W+ T +T P+ + HP QDR++T+R
Sbjct: 1197 PSGRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQDRLLTIR 1254
Query: 177 ECARSQGFSDSYKFVGDIQ 195
E AR QGF D+Y+F G ++
Sbjct: 1255 ESARLQGFPDNYRFRGTVK 1273
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-------------- 77
R I + D + DLP V NG S M Y P FQ+ IR
Sbjct: 534 RPIVLEDILSDLPEVANGESRDEML------YVKGPQTEFQRYIRSFNVEVHGPRAHVTK 587
Query: 78 --DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVVDLI 121
L DH + N R +IPK+ G+++R L P+++ V L+
Sbjct: 588 DSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERV-LL 646
Query: 122 PWCLP---NTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
P P + + K L FGR+ W+ T +T P+ + HP QDR++T+R
Sbjct: 647 PSGRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQDRLLTIR 704
Query: 177 ECARSQGFSDSYKFVGDIQ 195
E AR QGF D+Y+F G ++
Sbjct: 705 ESARLQGFPDNYRFRGTVK 723
>gi|420402789|ref|ZP_14901977.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|420469928|ref|ZP_14968639.1| DNA (Cytosine-5-)-methyltransferase [Helicobacter pylori Hp H-11]
gi|393016256|gb|EJB17416.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393086974|gb|EJB87644.1| DNA (Cytosine-5-)-methyltransferase [Helicobacter pylori Hp H-11]
Length = 234
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 63 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 116
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 117 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 161
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 162 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 204
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase [Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRFITPREAARIQSFSDNYIFYGN 251
>gi|121608158|ref|YP_995965.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae EF01-2]
gi|121552798|gb|ABM56947.1| DNA-cytosine methyltransferase [Verminephrobacter eiseniae EF01-2]
Length = 349
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +S+ NL R + +PG WR P +L+ C + AE + G++GR++W
Sbjct: 211 HVTSTLSDTNLERIKV--SKPGGTWRDWPK----NLVAEC--HRAESGRTYPGVYGRMEW 262
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEML 204
+ PT T + G G HP QDR I++RE A Q F +YKF I R E+
Sbjct: 263 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPRNYKF------IPKRGEVS 315
Query: 205 FHLLWRL 211
F +L RL
Sbjct: 316 FKVLGRL 322
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W N P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKNRP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F +
Sbjct: 283 T-IDTRFDTPSNGTDSHPELHRSITPREAARIQSFSDNYIFYAN 325
>gi|406963796|gb|EKD89769.1| Modification methylase HgiDII [uncultured bacterium]
Length = 380
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR+ IGDLP + G + +P+ H + ++E+N
Sbjct: 204 TVRNAIGDLPQINAGEK-----------SEKDPI----------------HSASNLAEIN 236
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R P G D P V++ +K + +K ++GR+ W+ PT +T
Sbjct: 237 LKRMAITPHD-GGDRLSWPEYLVLE--------CHKKVSGYKDIYGRMKWDSPSPT-ITG 286
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
M G HP QDR I++RE AR Q F D YKF G+ HI +L
Sbjct: 287 GCVMISKGRFGHPEQDRAISLREAARLQTFPDDYKFAGNTGHIAAQL 333
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 355
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+ IGDLP + NGA+V +E Y P+ + +++R D+ H+ ++
Sbjct: 184 TLWQAIGDLPELLNGATVDELE------YGGAPLSEYARRMRSDLAKCTGHLVSRNADSI 237
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R IP+ G +WR +P ++ G++ RL + P+ V
Sbjct: 238 VARYAHIPQ--GGNWRDVPG--------MMRDPVTDRRRYHSGIYKRLVQDA--PSVVIG 285
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
M+ HP QDR ++VRE AR Q FSD+Y F G I
Sbjct: 286 NFRKNML---IHPTQDRGLSVREAARLQSFSDNYVFHGSI 322
>gi|386753565|ref|YP_006226783.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
gi|384559823|gb|AFI00290.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
Length = 281
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 251
>gi|385216817|ref|YP_005778293.1| cytosine specific DNA methyltransferase [Helicobacter pylori F16]
gi|317176866|dbj|BAJ54655.1| cytosine specific DNA methyltransferase [Helicobacter pylori F16]
Length = 215
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 44 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 97
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 98 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 142
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 143 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 185
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DML-------- 80
+ + + D I DLPAV N M PY P FQ IR +M
Sbjct: 610 KKLLLEDAISDLPAVENDERRDEM------PYHEPPKTEFQHLIRSPREEMFDTSTMSKP 663
Query: 81 ---VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--DLIPW------------ 123
L DH ++ + R +IPK+ G+++R L +V + W
Sbjct: 664 ATHPLYDHRPLELNTDDYQRVCQIPKRKGANFRDLSGVRVRPDKRVEWDPDVKRVYLESG 723
Query: 124 --CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECA 179
+P+ A + F RL W+ PT VT P T HP QDR++T+RE A
Sbjct: 724 KPLVPDYAMSFVNGSSSKPFARLWWDETVPTVVTRAEPHNQAIT--HPEQDRVMTIRENA 781
Query: 180 RSQGFSDSYKFVGDIQH 196
R QGF D YK G ++
Sbjct: 782 RLQGFPDYYKLFGPVKE 798
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD I DL + +G E F Y +EP +QK++R L +H + + +
Sbjct: 455 VTVRDAIYDLAYLNSG------EGEFEQDYITEPSSEYQKQMRRGSKKLYNHKASNHAAI 508
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ + + IP + G + LPS+ V + Q+ G +GRL W+ PT +
Sbjct: 509 AIKKLEMIPPECGKEH--LPSDMV-------------GNQQFSGTWGRLKWDAVSPT-ID 552
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
GT HP R IT RE AR Q F D + F+G +I
Sbjct: 553 TRFDASSNGTNNHPFLHRAITPREAARIQSFDDKFVFIGQKLYI 596
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD I DL + +G E F Y +EP +QK++R L +H + + +
Sbjct: 535 VTVRDAIYDLAYLNSG------EGEFEQDYITEPSSEYQKQMRRGSKKLYNHKASNHAAI 588
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ + + IP + G + LPS+ V + Q+ G +GRL W+ PT +
Sbjct: 589 AIKKLEMIPPECGKEH--LPSDMV-------------GNQQFSGTWGRLKWDAVSPT-ID 632
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
GT HP R IT RE AR Q F D + F+G +I
Sbjct: 633 TRFDASSNGTNNHPFLHRAITPREAARIQSFDDKFVFIGQKLYI 676
>gi|88706064|ref|ZP_01103772.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71]
gi|88699778|gb|EAQ96889.1| C-5 cytosine-specific DNA methylase [Congregibacter litoralis KT71]
Length = 322
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +S+LN+ R + +PG WR P V D C ++ K + G++GR++W
Sbjct: 182 HVTATLSDLNMKRMKA--SKPGGTWRDWPQHLVAD----CHKRSSGK--TFPGVYGRMEW 233
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T G G HP+QDR I++RE A Q F SYKFV + + +GR
Sbjct: 234 DKPSPTMTTQCFGFGN-GRFGHPDQDRAISLREAAILQSFPKSYKFVESRKKVQFKALGR 292
Query: 201 L 201
L
Sbjct: 293 L 293
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG---DML-------- 80
+ + + D I DLPAV N M PY P FQ IR +M
Sbjct: 508 KKLLLEDAISDLPAVENDERRDEM------PYHEPPKTEFQHLIRSPREEMFDTSTMSKP 561
Query: 81 ---VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--DLIPW------------ 123
L DH ++ + R +IPK+ G+++R L +V + W
Sbjct: 562 ATHPLYDHRPLELNTDDYQRVCQIPKRKGANFRDLSGVRVRPDKRVEWDPDVKRVYLESG 621
Query: 124 --CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECA 179
+P+ A + F RL W+ PT VT P T HP QDR++T+RE A
Sbjct: 622 KPLVPDYAMSFVNGSSSKPFARLWWDETVPTVVTRAEPHNQAIT--HPEQDRVMTIRENA 679
Query: 180 RSQGFSDSYKFVGDIQH 196
R QGF D YK G ++
Sbjct: 680 RLQGFPDYYKLFGPVKE 696
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++++V++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVSVQEAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+KG +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKGTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|336243018|ref|XP_003343078.1| hypothetical protein SMAC_10456 [Sordaria macrospora k-hell]
Length = 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
PF +TV D I DLP + NG + G S + P +Q +RGD + +H +
Sbjct: 79 PF--VTVWDAISDLPKLENGE-----DRGLPS-FGGRPKTAYQAMLRGDCRLAYNHSATR 130
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEK-HNQWKGLFGRLDWEGNF 148
++ +NL R + IP PG WR +P DL+P + H + G + D
Sbjct: 131 LASINLERMRHIP--PGGSWRDIPH----DLLPAGMKLAKRSDHTKRYGRPRKTDLACTI 184
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T D H G HP Q+R TVRE AR Q F D + F G
Sbjct: 185 LTKC-DVH----WGAYIHPVQNRSFTVREAARLQSFPDFFDFKG 223
>gi|420454595|ref|ZP_14953425.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393072945|gb|EJB73719.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 281
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 251
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ +T+ D I DLP + +G E S+ Y++ PV +Q K+RG + + +H+S S
Sbjct: 185 KKVTINDAISDLPILKSG------EGSKSAGYRTAPVSDYQVKMRGTVSKVLNHVSTKHS 238
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
L L R + IP+ G DL P L + + G + RL G +
Sbjct: 239 PLVLERLKLIPEDGGR----------TDLPPEHLTKST-----FSGTWCRLPANG-IART 282
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T G P QDR +TVRE AR Q F DS++F G
Sbjct: 283 ITTRFDTPSSGMFTLPRQDRCLTVREAARIQSFPDSFRFPG 323
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ TVRD I DL A + + E F Y +E +QK +R D L +H + S
Sbjct: 521 KTTTVRDAIEDL------AYLNSNEGDFEQSYITEAKTEYQKLMRKDSDRLYNHKASNHS 574
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E+ + + IP + G ++ LP ++ +GRL W+ PT
Sbjct: 575 EIAIHKLSMIPPEKGKEY---------------LPENLLGKQKFNSTWGRLKWDEPSPT- 618
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG---DIQHIIG 199
+ GT HP +R IT+RE AR Q F D + F G DI+ IG
Sbjct: 619 IDTRFDAASNGTNNHPFLNRSITLREAARIQSFDDRFIFYGNKVDIRTQIG 669
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--------------- 76
+ + + D I DLP+VGN M+ Y+ EP FQ+ IR
Sbjct: 577 KKLLLEDAISDLPSVGNYEDKDEMD------YEKEPKTEFQRFIRLRREEMPGFSSLNAK 630
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--DLIPW----------- 123
+L DH ++ + R ++PK+ G+++R P V + + W
Sbjct: 631 PTKHLLYDHRPLQLNTDDYQRVCRVPKRKGANFRDFPGVIVNSGNKVEWDPNVERVYLES 690
Query: 124 ---CLPNTAEKH--NQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
+P+ A F RL W+ PT VT P HP QDR++++RE
Sbjct: 691 GKPLVPDYAMSFVGGSSSKPFARLWWDETVPTVVTRAEPHNQA--ILHPVQDRVLSIREN 748
Query: 179 ARSQGFSDSYKFVGDIQH 196
AR QGF D YK G ++
Sbjct: 749 ARLQGFPDYYKLFGPVKE 766
>gi|228471277|ref|ZP_04056083.1| modification methylase HgiDII [Porphyromonas uenonis 60-3]
gi|228306919|gb|EEK16017.1| modification methylase HgiDII [Porphyromonas uenonis 60-3]
Length = 351
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +TV+D IGDLPA+ G EV P H SK+
Sbjct: 184 PSNYLTVKDAIGDLPALRAG------EVDRYDPL---------------------HRSKS 216
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LNL R Q+ P G W+ P DL C + E + ++GR+ WE P
Sbjct: 217 LSPLNLKRIQRTPY--GGGWQDWPE----DLRLEC--HKRENGKSFGSVYGRMVWEKPAP 268
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T G G HP QDR I++RE A Q F SY+F D + +
Sbjct: 269 TMTTLCTGYGN-GRFGHPTQDRAISIREAALLQTFPKSYQFFSDEKDV 315
>gi|374572064|ref|ZP_09645160.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
gi|374420385|gb|EHQ99917.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
Length = 338
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
A TVRD I DLP + NG+S PY+++ V + +RG+ + H+ ++
Sbjct: 170 ATTVRDAIWDLPVLRNGSSKDV------RPYRTQAVSAYSLALRGNRQTCSGHLVSRNAD 223
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+ R IP+ G +W+ +P + + + +K G++ RL + P+ V
Sbjct: 224 EIVARYPHIPQ--GGNWKDIPDD--------LMGSYFDKSRCHTGIYRRL--SASEPSVV 271
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
M+ HP Q R ++VRE AR Q F D+Y+F G I
Sbjct: 272 LGNFRKNML---IHPTQSRGLSVREAARIQSFPDNYQFCGSI 310
>gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
Length = 281
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 251
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 43 LPAVGNGASVTTMEV-GFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKI 101
+P V AS + G Y + P FQ K R ++ E + R I
Sbjct: 965 IPEVACDASRSYCRPPGALDSYHTPPKTSFQVKCRQRKPTDLQQFTRVFKEETVERVVNI 1024
Query: 102 PKQPGSDWRVLPSEKVVDLIPWCLPNTAE---KHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
P QP +D++ L D+ W N A + GL+GR+D F T+VT P
Sbjct: 1025 PLQPKADYKSLHP----DMWEWLFANPASATARDGFHSGLYGRIDASRWFQTTVTKVEPT 1080
Query: 159 GMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+P R++TVRE ARSQGF D ++F
Sbjct: 1081 AKQSWVLNPYCKRMVTVRELARSQGFPDHFRF 1112
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDTYIFYGN 325
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 24 STANG-APFRAITVRDTIGDL----------PAVGNGASVTTMEV----GFSSP--YKSE 66
+T NG APF+A+TV D I DL P+ +GA + G+ Y
Sbjct: 950 NTQNGVAPFKAVTVADAIDDLKRFHWKHPKRPSPNDGAPMVACNSHSFWGYEGADLYDHV 1009
Query: 67 PVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLP 126
FQ+ R H ++ + N+ R IPK G D R LP + + P
Sbjct: 1010 ETTSFQRAARCKPSQNLQHFTRRLPLPNVERVLAIPK--GGDSRHLPRD--LHYFTPSNP 1065
Query: 127 NTAEKHNQWKGLF-GRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
+A +K ++ GRL +G FP T+ P G H + RI+TVRE AR+QGF
Sbjct: 1066 ISATGRGGYKTVYYGRLHPDGFFPAITTNIGPTAKQGRVLHYSCGRIVTVRELARAQGFP 1125
Query: 186 DSYKF 190
D + F
Sbjct: 1126 DWFIF 1130
>gi|225691144|gb|ACO06245.1| methylcytosine methyltransferase M.BbrII [Bifidobacterium breve
UCC2003]
gi|339479331|gb|ABE95799.1| Cytosine methyl transferase, RM methylase bbrUIIM [Bifidobacterium
breve UCC2003]
Length = 349
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 78/192 (40%), Gaps = 42/192 (21%)
Query: 14 ARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQK 73
A N H T +R TV D I DLP++ G +
Sbjct: 171 ALNDHIEMPEPTVGADRYR--TVYDAIHDLPSLEAG-----------------------Q 205
Query: 74 KIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN 133
K D L H ++ +S NL R +PG W P E L C T +
Sbjct: 206 KDDDDSL----HFARNLSPTNLKRAHA--SKPGGTWEDWPEE----LRAPC--QTRDSGK 253
Query: 134 QWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+K +GR++W PT T + G G HP QDR +T+RE +R QGF DS+ F G
Sbjct: 254 SFKSFYGRMEWNKPSPTITTQSYNPG-AGRFTHPAQDRALTLREASRLQGFPDSFVFTGP 312
Query: 194 IQHI----IGRL 201
+ I +GRL
Sbjct: 313 SEKITLSTVGRL 324
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|313886494|ref|ZP_07820210.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924040|gb|EFR34833.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 351
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +TV+D IGDLPA+ G + + +P+ H SK+
Sbjct: 184 PSNYLTVKDAIGDLPALRAGEAD-----------RYDPL----------------HRSKS 216
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LNL R Q+ P G W+ P DL C + E + ++GR+ WE P
Sbjct: 217 LSPLNLKRIQRTPY--GGGWQDWPE----DLRLEC--HKRENGKSFGSVYGRMVWEKPAP 268
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T G G HP QDR I++RE A Q F SY+F D + +
Sbjct: 269 TMTTLCTGYGN-GRFGHPTQDRAISIREAALLQTFPKSYQFFSDEKDV 315
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPKLHRSITPREAARIQSFSDNYIFYGN 325
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKERGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420446351|ref|ZP_14945248.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
gi|393065223|gb|EJB66052.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
Length = 481
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 451
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 30 PF-RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
PF + ITV + IGDLP + NG + + S SE + + +R +
Sbjct: 179 PFDKKITVEEAIGDLPDLENGEMLEKGKYKVPSSVASE----YAQLMREHSHYPTQNFVS 234
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
++L + R + I + G +WR +P E + N A+K G++ RL +
Sbjct: 235 RNNDLVIQRYKYIKQ--GQNWRAIPDE--------LMQNYADKGRTHSGIYKRLI--ADQ 282
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
P+ V + M+ HP QDR ++VRE AR Q F D + F G I HI
Sbjct: 283 PSVVISNYRKSML---IHPYQDRGLSVREAARLQSFPDDFYFEGPISHI 328
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVDVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|421720965|ref|ZP_16160242.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R055a]
gi|407225749|gb|EKE95519.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R055a]
Length = 216
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+++ V+D I DL A + + E F S Y + +Q +R D L +H + S
Sbjct: 47 QSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATNHS 100
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ L + + I K+ G + CLP Q+K +GRL+W PT
Sbjct: 101 QAALEKLKLINKEKGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISPT- 144
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+ GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 145 IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 186
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|385215328|ref|YP_005775284.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESNYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S++ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQVALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPNNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-GDMLVLNDHISK 88
P R + V IGDLP +V+T + + Y++ FQ+ R G + VLN H +
Sbjct: 221 PSRLVRVWSAIGDLPV-----TVSTTDESKALGYRTGAWCDFQRYAREGSLGVLNHHCA- 274
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
+ +L R +P+ G WR +P L+P + + + +GRL +
Sbjct: 275 GLGPNSLARISHVPQ--GGSWRDIPRH----LLPAGMQRARTSDHTKR--YGRLAPKDLA 326
Query: 149 PTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T +T DPH G HPN+DR++TVRE AR Q F D + F+G
Sbjct: 327 CTVLTKCDPH----WGCYIHPNEDRVLTVREAARLQSFPDRFNFIG 368
>gi|384895439|ref|YP_005769428.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + + F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNDGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 251
>gi|147791011|emb|CAN68025.1| hypothetical protein VITISV_014485 [Vitis vinifera]
Length = 188
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 29/141 (20%)
Query: 76 RGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVL--------------PSEKVV--- 118
+G +L DH ++E N +R +IP++ G+++R L P+ K +
Sbjct: 11 KGYNSILYDHRPYPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLP 70
Query: 119 ---DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITV 175
L+P C+ + + + K F RL W+ PT +T P+ + QDR++T+
Sbjct: 71 SGHPLVPDCV--FSYEQGKSKRPFARLWWDETMPTVLTFPY-------LRNQKQDRVLTI 121
Query: 176 RECARSQGFSDSYKFVGDIQH 196
RECAR QGF D Y+F G ++
Sbjct: 122 RECARLQGFPDYYRFRGTVKE 142
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
Length = 281
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 251
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 9 LKVKLARNSHYAAVRSTANG-APFRAITVRDTIGDLPAVG------NGASVTTME----- 56
L++K N HY NG AP +++ D I DLP G S E
Sbjct: 958 LEIKFP-NGHYVRPIKFMNGTAPHSYVSIDDAIHDLPLFDWSNPDRAGRSRQDPETRDDI 1016
Query: 57 -------------VGFSSPYKSEP----VLWFQKKIRGDMLVLNDHISKAMSELNLIRCQ 99
+ + Y+ EP LW ++K D+ ++ + + R +
Sbjct: 1017 KQVKCDKQKAWCGLRGQAVYRHEPRTAFQLWCRRKPTEDL----QQYTRTYLPIKVKRVR 1072
Query: 100 KIPKQPGSDWRVLPSEKVVDLIPW--CLPNTAEKHNQWK-GLFGRLDWEGNFPTSVTDPH 156
IP + +D+R +PS L W P +A + ++ GL+GRLD F T+VT+
Sbjct: 1073 SIPLKAKADYRDMPSA----LWEWQTANPGSAMARSGFRPGLYGRLDRSLWFQTTVTNVD 1128
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHII 198
P +P RI+TVRE ARSQGF D + F D ++I
Sbjct: 1129 PTAKQCRVLNPYCMRIVTVRELARSQGFPDYFTFYADGDNVI 1170
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420406011|ref|ZP_14905184.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021830|gb|EJB22960.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 281
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|420406179|ref|ZP_14905350.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393024200|gb|EJB25311.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 281
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGTFESDYLNPVQSNYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDH 85
+NG R ++V D I DLP + +G+S + + YK P FQ+++R H
Sbjct: 199 SNGQAPR-VSVFDAISDLPKIPDGSSSS------RAAYKKPPN-KFQRQLRNGQRKPTQH 250
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWE 145
++ S+L L R +K+P G +W+ +P E + + EK + + R +
Sbjct: 251 VTTKNSDLVLKRIRKVPS--GGNWKDIPRELM------QVNGDYEKIQKAHSMIYRRLIK 302
Query: 146 GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
++T+ G HP + R+ +VRE AR Q F DSYKF G + +
Sbjct: 303 TEPSVTITNFRK----GMIIHPTEHRLFSVREAARIQTFPDSYKFEGGLSSM 350
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITSREAARIQSFSDNYIFYGN 325
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 30/173 (17%)
Query: 34 ITVRDTIGDLPAVGNGASVTTM----EVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
++V + IGDLP + NG + ++ + SSPY Q+ +G + + +SK+
Sbjct: 187 VSVEEAIGDLPVLHNGDMIDSLPYTKSIKESSPYA-------QQMRKGSIESKQNFVSKS 239
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
++L + R + I + G +WR +P + N ++K G++ RL + N P
Sbjct: 240 -NDLVMQRYKYIGQ--GENWRAIPES--------LMRNYSDKTRCHSGIYKRL--KANCP 286
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG---DIQHIIG 199
+ V + M+ HP QDR ++VRE AR Q F D++ F G IQ IG
Sbjct: 287 SVVISNYRKSML---IHPYQDRGLSVREAARLQSFPDTFIFQGPHMSIQQQIG 336
>gi|444374479|ref|ZP_21173785.1| cytosine specific DNA methyltransferase [Helicobacter pylori A45]
gi|443621134|gb|ELT81574.1| cytosine specific DNA methyltransferase [Helicobacter pylori A45]
Length = 186
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 15 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKDSPKLYNHQATN 68
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ + CLP Q+K +GRL+W P
Sbjct: 69 HSQAALEKLKLINKEQSKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 113
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T + GT HP R IT RE AR Q FSD+Y F G+ + ++
Sbjct: 114 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGNKTSVCKQI 164
>gi|449085227|gb|AGE84600.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 352
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 182 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 235
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G +W LP Q+K +GRL+W P
Sbjct: 236 HSQAALEKLKLINKEQGKEW---------------LPKNLHGKQQFKSTWGRLNWNKISP 280
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 281 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 323
>gi|420398114|ref|ZP_14897327.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393014788|gb|EJB15959.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|420394610|ref|ZP_14893842.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393015939|gb|EJB17102.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 234
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 63 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 116
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 117 HSQTALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 161
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 162 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 204
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 91/239 (38%), Gaps = 54/239 (22%)
Query: 2 HVFTGPELKVKLA-RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTME---- 56
H + L++KL +N + R+ + IT+ DTI DLP + M
Sbjct: 575 HFYPDGNLQIKLPDQNKIFMDFRTRYSRGTLDPITIGDTISDLPCFEYRNPMKIMGDFNK 634
Query: 57 ------------------------------VGFSS-PYKSEP------VLWFQKKIRGDM 79
VGF Y+ P L Q+K D+
Sbjct: 635 PTRKKFKKRSKECVLVNGDHRFGRLEKTDWVGFQKFKYRINPQNNFQIYLRTQRKEDDDL 694
Query: 80 LVLND----------HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
++ ND H++ SE + + IP + G+D++ LP E T
Sbjct: 695 VLQNDGDEEEEPINWHVTGRFSEKTVEQIWHIPIREGADYKDLPEELKYKEAEPKKSQTK 754
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
+ ++G FGRL F T +T DP G G HP+Q R++TV E R+QGF D
Sbjct: 755 DYSRDYEGNFGRLSPHLLFRTVITTMDPRNQGRTGQVLHPSQHRVLTVLEAQRAQGFPD 813
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGSFESDYLNPIQSNYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALKKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420421433|ref|ZP_14920511.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393037951|gb|EJB38985.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 481
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPVQSNYQALMRKNSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T + GT HP R IT RE AR Q FSD+Y F G+ I ++
Sbjct: 409 T-IDTRFDTPSNGTNSHPKLHRSITPREAARIQSFSDNYIFYGNKTSICKQI 459
>gi|404485599|ref|ZP_11020796.1| DNA (cytosine-5-)-methyltransferase [Barnesiella intestinihominis
YIT 11860]
gi|404338287|gb|EJZ64734.1| DNA (cytosine-5-)-methyltransferase [Barnesiella intestinihominis
YIT 11860]
Length = 352
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 36/169 (21%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
P ++V+ IGDLP + G + K++P+ H +K
Sbjct: 187 TPDDYVSVKSVIGDLPEIEAGETD-----------KNDPL----------------HRAK 219
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
++S LNL+R + P G W+ P E L C A K + ++GR+ WE
Sbjct: 220 SLSPLNLLRIRSTPY--GGSWKDWPEE----LRLKCHKTDAGK--SFGSVYGRMVWESPA 271
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
PT T +G G HP+QDR I+VRE A Q F +YKF D + +
Sbjct: 272 PTMTTQCTGLGN-GRFGHPSQDRAISVREAALIQTFPKTYKFFSDEERV 319
>gi|421888942|ref|ZP_16320016.1| Modification methylase HgiDII [Ralstonia solanacearum K60-1]
gi|378965719|emb|CCF96764.1| Modification methylase HgiDII [Ralstonia solanacearum K60-1]
Length = 321
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +++E NL R Q +PG WR P + V D + A+ + G++GR++W
Sbjct: 183 HAASSLTEKNLQRIQH--SRPGGTWRDWPEDLVADC------HKADTGRTYPGVYGRMEW 234
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQH-IIGR 200
+ PT T + G G HP Q R I++RE A Q F YKFV G++ ++GR
Sbjct: 235 DRPAPTMTTQCYGFGN-GRFGHPEQHRAISLREAAILQSFPRDYKFVPKKGEVSFTVLGR 293
Query: 201 L 201
L
Sbjct: 294 L 294
>gi|420403157|ref|ZP_14902343.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
gi|393020323|gb|EJB21462.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
Length = 234
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 63 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 116
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q K +GRL+W P
Sbjct: 117 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQLKSTWGRLNWNKVSP 161
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 162 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 204
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 60/236 (25%)
Query: 2 HVFTGPELKVKLARNSHYAA-------VRSTANGAPFRAITVRDTIGDLPA---VGNGAS 51
H F +L +KL HY +R+ AP +T D+IGDL V GA
Sbjct: 976 HAFPSTQLGLKL----HYGGEEKLIKPIRTAPGTAPHHPVTTEDSIGDLAPFDWVAPGAR 1031
Query: 52 V---------------------TTMEVGFSSPYKSEPVLWFQ---KKIRGDMLVLND--H 85
T V PY ++P +Q +++R L+D H
Sbjct: 1032 ARPRMDEKGRPVKVIVCDNRESKTCGVDEDEPYHTKPRTRYQMEMRQVRESTRPLSDLQH 1091
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWE 145
+KA + R KIP++ G+ + K + R+ +
Sbjct: 1092 FTKAFKPEVVRRVTKIPRRDGA--------------------SVGKRGYKVKTYARVSRK 1131
Query: 146 GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
G F T VT+ P + H +RI+++RE AR+QGF D + FV + I RL
Sbjct: 1132 GFFHTIVTNISPTAKQSSVIHYIDNRILSIRELARAQGFPDDFVFVANKVETIHRL 1187
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
Length = 355
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ V+D I DL A + + E F S Y + +Q +R D L +H + SE
Sbjct: 188 VNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATNHSEA 241
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L + + I K+ G + CLP Q+K +GRL+W PT +
Sbjct: 242 ALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSPT-ID 285
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 286 TRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + M+ ++P K+E + K R + L+ L
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAP-KTEFENFISLK-RSETLLPACGGDPTRRL 612
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGL---- 138
DH + + +L R IPKQ G+++R +P V + P K K +
Sbjct: 613 FDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFRAKLKSGKNVVPAY 672
Query: 139 ------------FGRL--DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
FGRL D N + +PH ++ HP Q+R+++VRE AR QGF
Sbjct: 673 AISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVI----HPMQNRVLSVRENARLQGF 728
Query: 185 SDSYKFVGDIQH 196
D YK G I+
Sbjct: 729 PDCYKLCGTIKE 740
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + M+ ++P K+E + K R + L+ L
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAP-KTEFENFISLK-RSETLLPAFGGDPTRRL 612
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGL---- 138
DH + + +L R IPKQ G+++R +P V + P K K +
Sbjct: 613 FDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFRAKLKSGKNVVPAY 672
Query: 139 ------------FGRL--DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
FGRL D N + +PH ++ HP Q+R+++VRE AR QGF
Sbjct: 673 AISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVI----HPMQNRVLSVRENARLQGF 728
Query: 185 SDSYKFVGDIQH 196
D YK G I+
Sbjct: 729 PDCYKLCGTIKE 740
>gi|420493409|ref|ZP_14991980.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393112665|gb|EJC13185.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 481
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLRSNEGTFESDYLNPIQSSYQALMRKDSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKPINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F DSY F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPKLHRSITPREAARIQSFIDSYIFYGN 451
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + M+ ++P K+E + K R + L+ L
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAP-KTEFENFISLK-RSETLLPACGGDPTRRL 612
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGL---- 138
DH + + +L R IPKQ G+++R +P V + P K K +
Sbjct: 613 FDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFRAKLKSGKNVVPAY 672
Query: 139 ------------FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
FGRL + T VT P HP Q+R+++VRE AR QGF D
Sbjct: 673 AISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQC--VIHPMQNRVLSVRENARLQGFPD 730
Query: 187 SYKFVGDIQH 196
YK G I+
Sbjct: 731 CYKLCGTIKE 740
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + M+ ++P K+E + K R + L+ L
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAP-KTEFENFISLK-RSETLLPACGGDPTRRL 612
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGL---- 138
DH + + +L R IPKQ G+++R +P V + P K K +
Sbjct: 613 FDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFRAKLKSGKNVVPAY 672
Query: 139 ------------FGRL--DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
FGRL D N + +PH ++ HP Q+R+++VRE AR QGF
Sbjct: 673 AISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVI----HPMQNRVLSVRENARLQGF 728
Query: 185 SDSYKFVGDIQH 196
D YK G I+
Sbjct: 729 PDCYKLCGTIKE 740
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + M+ ++P K+E + K R + L+ L
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAP-KTEFENFISLK-RSETLLPACGGDPTRRL 612
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGL---- 138
DH + + +L R IPKQ G+++R +P V + P K K +
Sbjct: 613 FDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFRAKLKSGKNVVPAY 672
Query: 139 ------------FGRL--DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
FGRL D N + +PH ++ HP Q+R+++VRE AR QGF
Sbjct: 673 AISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVI----HPMQNRVLSVRENARLQGF 728
Query: 185 SDSYKFVGDIQH 196
D YK G I+
Sbjct: 729 PDCYKLCGTIKE 740
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGRQQFKSTWGRLNWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420491970|ref|ZP_14990546.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420525737|ref|ZP_15024140.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393108665|gb|EJC09199.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393133758|gb|EJC34174.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 451
>gi|420434939|ref|ZP_14933939.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393052707|gb|EJB53653.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
Length = 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 451
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSSKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|323356693|ref|YP_004223089.1| site-specific DNA methylase [Microbacterium testaceum StLB037]
gi|323273064|dbj|BAJ73209.1| site-specific DNA methylase [Microbacterium testaceum StLB037]
Length = 360
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ ++ LNL R + PG WR P V+L+ C +T ++ +GR+ W
Sbjct: 214 HTARRLTPLNLRRMKA--SAPGGTWRDWP----VELLAPC--HTRSSGASFQAFYGRMTW 265
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ----HIIGR 200
+ PT T G G HP QDR +T+RE A QGF SY+FV + +GR
Sbjct: 266 DAPSPTITTQSFNFG-TGRFGHPEQDRSLTLREAAMLQGFPRSYRFVKGKEKPSMQAVGR 324
Query: 201 L 201
L
Sbjct: 325 L 325
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420399493|ref|ZP_14898698.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019642|gb|EJB20783.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 281
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-------GDML----- 80
A+ + D I DLP V N + E + +P ++E FQK IR G M
Sbjct: 582 ALLLEDAISDLPHVTNDENQD--ERNYEAPSETE----FQKYIRLKKNEMVGSMASAQSA 635
Query: 81 ---VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV-DLIPW------------- 123
+L DH +++ + R +IP++ G+++R LP V + + W
Sbjct: 636 PDRILYDHRPLQLNKDDYERVCQIPQKKGANFRDLPGVLVNGNKVQWDPSVQRVMLDSGK 695
Query: 124 -CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
+P+ A FGRL W+ T VT P HP Q+R++T+RE AR
Sbjct: 696 PLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQA--ILHPTQNRVLTIRENAR 753
Query: 181 SQGFSDSYKFVGDIQH 196
QGF D YK G ++
Sbjct: 754 LQGFPDCYKLCGPVKE 769
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 44/199 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + DTI DLP V N S Y + P FQK IR +M+
Sbjct: 581 KALYLGDTIDDLPPVENDNSDD------EKSYGTTPRTDFQKYIRLKRSEMVNYLADSQS 634
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWR----VLPSEKVVDLIPW--------- 123
+L DH ++ + R IPK+ G+++R VL E V+ P
Sbjct: 635 APSGMLYDHRPLKLNTDDYERVCHIPKEKGANFRDLKGVLVKENKVEWDPSFKRVYLKSG 694
Query: 124 --CLPNTAEK--HNQWKGLFGRLDWEGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRE 177
+P+ A FGRL W+ T VT +PH ++ HP+QDR++++RE
Sbjct: 695 KPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQALL----HPDQDRVLSIRE 750
Query: 178 CARSQGFSDSYKFVGDIQH 196
AR QGF D YK G ++
Sbjct: 751 NARLQGFPDCYKLCGPVKQ 769
>gi|429738761|ref|ZP_19272550.1| DNA (cytosine-5-)-methyltransferase [Prevotella saccharolytica
F0055]
gi|429159086|gb|EKY01606.1| DNA (cytosine-5-)-methyltransferase [Prevotella saccharolytica
F0055]
Length = 366
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +TV TIG LP + G EV K +P+ H +KA
Sbjct: 196 PGNYVTVEKTIGGLPKLNAG------EVD-----KQDPL----------------HRAKA 228
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LN+ R Q P G WR P DL+ C + +E + ++GR+ WE P
Sbjct: 229 LSPLNMKRIQSTPY--GGSWRDWPE----DLLLQC--HKSENGRSFGSVYGRMVWEKPAP 280
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T +G G HP Q+R I++RE A Q F +YKF + + I
Sbjct: 281 TMTTQCTGLGN-GRFGHPTQNRAISIREAALIQTFPKTYKFFPNEKEI 327
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++++V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVSVQDAISDL------AYLCSNEGSFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|121583544|ref|YP_973963.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
gi|120596788|gb|ABM40221.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
Length = 373
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 36/167 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVR +G LPA+G+G E P H + A+S L
Sbjct: 208 VTVRKAVGALPAIGDG------EASAHDPL---------------------HRAAALSAL 240
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N R + +PG WR P DL+ C + +H+ G++GR++W+ PT T
Sbjct: 241 NQQRVRA--SRPGGTWRDWPP----DLVAECHRKASGRHS--AGVYGRMEWDKPAPTMTT 292
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
G G HP Q R I++RE A Q F SYKFV ++ +
Sbjct: 293 LCIGYGN-GRFGHPQQHRGISLREAAIFQSFPTSYKFVKPGMRVLAK 338
>gi|420505480|ref|ZP_15003996.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393117012|gb|EJC17516.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
Length = 487
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPKLHRSITPREAARIQSFSDDYIFYGN 451
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE R Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREADRIQSFSDNYIFYGN 325
>gi|388514021|gb|AFK45072.1| unknown [Lotus japonicus]
Length = 219
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 37/166 (22%)
Query: 63 YKSEPVLWFQKKIR---GDML----------VLNDHISKAMSELNLIRCQKIPKQPGSDW 109
Y P FQK IR +ML L+DH S ++ + R +IPK+ G+ +
Sbjct: 3 YDEPPQTEFQKFIRLTKNEMLGISNQKRLKSTLHDHRSLELNVDDYQRVCRIPKKKGACF 62
Query: 110 RVLPSEKV--VDLIPW--------------CLPNTAEKHNQWKGL--FGRLDWEGNFPTS 151
R LP +V + + W +PN A K F RL W+ PT
Sbjct: 63 RDLPGVRVGPDNKVEWDPDVQREYLESKKPLVPNYAMSFVGGKSSKPFARLWWDETVPTV 122
Query: 152 VT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
VT +PH ++ HP QDR++++RE AR QGF D YK G ++
Sbjct: 123 VTRAEPHNQAII----HPEQDRVLSIRENARLQGFPDYYKLCGPVK 164
>gi|385224707|ref|YP_005784632.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
83]
Length = 281
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQVLMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 38/192 (19%)
Query: 28 GAPFRAITVRDTIGDLPA-------VGNGASVTTME--------------------VGFS 60
G F+ +++ D IGDLPA + AS E GF+
Sbjct: 493 GCAFQGVSLGDAIGDLPAFDWKNPHIVIAASADDREKEAGREKYIPAFLVNPLGSAAGFA 552
Query: 61 SP--YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV 118
Y+ + FQ++ RG+ + ++ + R +P +PG+ +P
Sbjct: 553 KAEDYRRHALTSFQRRCRGNRWRVTQQQTRTFGATAVERACNVPGRPGACHLDVPE---- 608
Query: 119 DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
P L + +H +GRLD+ P G G HP Q+R +TVRE
Sbjct: 609 ---PLALGKQSSQHANKP--YGRLDFAVPAPVLSAQMTLSGASGQVLHPTQNRCLTVREA 663
Query: 179 ARSQGFSDSYKF 190
AR QGF D Y+F
Sbjct: 664 ARIQGFPDWYEF 675
>gi|448326112|ref|ZP_21515482.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
gi|445613246|gb|ELY66954.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
Length = 354
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P V D IGDLP VG G +T Y +EP QK +R L+ HI+ +
Sbjct: 141 PVETPGVMDGIGDLPEVGPGEEITE--------YDTEPRTLLQKDLRNGSDELSHHIAAS 192
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ + IP G + +P E L ++ HN + L + + P
Sbjct: 193 HSQDMVEMISHIPD--GGNRTAIPDE---------LQPSSGYHNSYSRL------KSDEP 235
Query: 150 T-SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
++T C HP QDR +T RE AR Q F D+Y+F G
Sbjct: 236 AVAITSNMSKPSSARCIHPFQDRGLTPREGARLQTFPDTYRFDG 279
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFGSDYLNPIQSNYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +G L+W P
Sbjct: 238 HSQATLEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGHLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-LVLNDHISKAMSEL 93
TVRD I DL + +G E S Y+ +Q +R + +L +HI+ + S++
Sbjct: 191 TVRDAISDLSYLNSG------EGEMISQYRKPSESNYQTMMRANSGNILYNHIATSHSQI 244
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L + IP + G ++ LP + ++K +GRL+W+ PT +
Sbjct: 245 ALDKLAMIPPEKGKEY---------------LPRELWGNQKFKTTWGRLEWDKQAPT-ID 288
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
G HP +R IT RE AR Q F D ++F+G HI ++
Sbjct: 289 TRFDTPSNGKNSHPYLNRAITPREAARIQSFPDDFEFIGKKSHITKQI 336
>gi|385248556|ref|YP_005776775.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
Length = 281
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 110 PSQSVNIQDVISDL------AYLCSNEGAFESDYLNPIQSSYQVLMRKDSPKLYNHQATN 163
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 164 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSP 208
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q F D+Y F G+
Sbjct: 209 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFRDNYIFYGN 251
>gi|429190201|ref|YP_007175879.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|429134419|gb|AFZ71430.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
Length = 403
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P V D IGDLP VG G +T Y +EP QK +R L+ HI+ +
Sbjct: 190 PVETPGVMDGIGDLPEVGPGEEITE--------YDTEPRTLLQKDLRNGSDELSHHIAAS 241
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ + IP G + +P E L ++ HN + L + + P
Sbjct: 242 HSQDMVEMISHIPD--GGNRTAIPDE---------LQPSSGYHNSYSRL------KSDEP 284
Query: 150 T-SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
++T C HP QDR +T RE AR Q F D+Y+F G
Sbjct: 285 AVAITSNMSKPSSARCIHPFQDRGLTPREGARLQTFPDTYRFDG 328
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|427705729|ref|YP_007048106.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
gi|427358234|gb|AFY40956.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
Length = 346
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H+ +S LNL R + +PG WR P E LI C +T + + G++GR++W
Sbjct: 210 HLCSKLSNLNLRRIRA--SKPGGTWRDWPRE----LIAEC--HTKKSGKTYPGVYGRMEW 261
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T G G HP QDR I++RE A Q F +Y+FV + + IGR
Sbjct: 262 DRPSPTITTQCFGFGN-GRFGHPEQDRAISLREAALLQSFPANYEFVAPNEALSLSHIGR 320
Query: 201 L 201
L
Sbjct: 321 L 321
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPVQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGSFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLIDKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 33/190 (17%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR----GDMLV---LND 84
+ + + D I DLP V N E+ + ++E FQ+ IR G+ + L D
Sbjct: 628 KKLLLEDAISDLPRVQNNERRD--EIKYDKAAQTE----FQRFIRLSKHGNTSLNSLLYD 681
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV--VDLIPW--------------CLPNT 128
H ++ + R +IPK+ G +R LP +V + + W +P+
Sbjct: 682 HRPLELNADDYQRVCRIPKKKGGCFRDLPGVRVGADNKVEWDPDVERVYLDSGKPLVPDY 741
Query: 129 AEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
A + F RL W+ PT VT P HP QDR++T+RE AR QGF D
Sbjct: 742 AMTFVNGTSSKPFARLWWDETVPTVVTRAEPHNQ--AILHPEQDRVLTIRENARLQGFPD 799
Query: 187 SYKFVGDIQH 196
YK G ++
Sbjct: 800 FYKLCGPVKE 809
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ +++ I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQEAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|422830981|ref|ZP_16879132.1| hypothetical protein ESNG_03637 [Escherichia coli B093]
gi|432624898|ref|ZP_19860898.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE76]
gi|371603062|gb|EHN91741.1| hypothetical protein ESNG_03637 [Escherichia coli B093]
gi|431153311|gb|ELE54226.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE76]
Length = 346
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R +TV+D IG LP +G G + +S+P+ H S +
Sbjct: 182 RKVTVKDAIGQLPKIGAGEKL-----------ESDPL----------------HRSPKLR 214
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN--QWKGLFGRLDWEGNFP 149
++NL R + PG W P E D +KH+ +K ++GR+ W+ P
Sbjct: 215 DINLKRI--LHSLPGGTWDDWPEEIRAD--------CHKKHSGATYKSVYGRMVWDDTSP 264
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T T + G G HP Q+R IT+RE A Q F YKF+G
Sbjct: 265 TITTQCYGYGN-GRFGHPEQNRAITLREAAILQSFPMDYKFIG 306
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE R Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREATRIQSFSDDYIFYGN 325
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ +TV D I DLP + ++ S+ Y S P +Q+++RG++ L +H S
Sbjct: 196 KKLTVMDAISDLPPLEANST--------SNEYASSPKNDYQQRMRGEVEELTEHNSSNYG 247
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT- 150
+ Q+I ++P VD +P L N ++ + RL +PT
Sbjct: 248 ----TKMQEI-------LSLIPEGGTVDDLPLRL----RPKNYFRNTYARL-----YPTL 287
Query: 151 ---SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+VT C HP Q+R ++ RE AR QGF DSY F G
Sbjct: 288 PSPTVTRNFGTPSSSRCVHPFQNRALSTREGARLQGFHDSYVFTG 332
>gi|68655475|emb|CAJ01709.1| chromomethylase 2 [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 82 LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-----EKVVDLIPW----CLPN----- 127
L DH A+ N +R +IPK+ G+++R LP + V L P LP+
Sbjct: 6 LYDHRPLALGNDNYLRVLQIPKKKGANFRDLPGVVVGPDNVAKLDPTKERVLLPSGRPLV 65
Query: 128 -----TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
T E + FGRL W+ T +T P+ + HP QDR++TVRE AR Q
Sbjct: 66 LDCILTYEDGRCLRP-FGRLWWDEVVGTVLTCPN--IHMQALIHPAQDRLLTVRESARLQ 122
Query: 183 GFSDSYKFVGDIQ 195
GF DSY+F G ++
Sbjct: 123 GFPDSYRFRGTVK 135
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 47/196 (23%)
Query: 29 APFRAITVRDTIGDL-----------------------PAVGNGASVTTMEV-------- 57
APF A+TV++ I DL PA A + ++
Sbjct: 859 APFYAVTVKEAIDDLLPWDWENPGIFYPAGARRLRSLKPAFPAAAGIRRVDTEDAQVSGY 918
Query: 58 GFSSPYKSEPVLWFQ---KKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS 114
G+ Y S P +Q +K +G+ + H + S N+ R +P +P ++++ LP
Sbjct: 919 GYPVRYASVPRTLYQAFCRKGQGEFTRVYHHCTSLFSVKNVERTVNVPIRPCANFKDLPQ 978
Query: 115 EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
P + + ++ WK D G F + T HP HP R++T
Sbjct: 979 -------PLRVGSGNKRGRLWK------DLNGQFHSLQTTIHPGARNAYIIHPTDRRVLT 1025
Query: 175 VRECARSQGFSDSYKF 190
+RE AR+QGF D Y+F
Sbjct: 1026 LRELARAQGFPDDYEF 1041
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1210
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 77 GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK 136
D + N H++ S R IP +P +D R LP + + NT + +
Sbjct: 920 SDCRIRNWHVTPRFSAKVTERICNIPLKPNADHRHLPKPLRLKNL-----NTCRNPHDFD 974
Query: 137 GLFGRLDWEGNFPTSVTD--PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G +GRL ++G F T +T PH G HPNQ R +++ E R+QGF D +K
Sbjct: 975 GNYGRLGFQGQFNTIITKMHPHNQNKCGAVLHPNQYRTLSLLEAQRAQGFPDRFKL 1030
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 30 PF-RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
PF + ITV + IGDLP + NG +E G SE + Q + +S+
Sbjct: 179 PFEKKITVEEAIGDLPDLDNG---EMLEKGKYKVPCSEASEYAQLMREHSHYPTQNFVSR 235
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
NL+ + + G +WR +P E + N A+K G++ RL +
Sbjct: 236 NN---NLVIQRYTHIKQGQNWRAIPDE--------LMQNYADKGRTHSGIYKRLI--ADQ 282
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
P+ V + M+ HP QDR ++VRE AR Q F D + F G I HI
Sbjct: 283 PSVVISNYRKSML---IHPYQDRGLSVREAARLQSFPDDFYFEGPISHI 328
>gi|291515626|emb|CBK64836.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301]
Length = 360
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P TV++TIGDLP + G + K++P+ H +KA
Sbjct: 195 PNEYKTVKETIGDLPELKAGETD-----------KNDPL----------------HRAKA 227
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LNL R P G W+ P DL C + + + ++GR+ WE P
Sbjct: 228 LSPLNLERLHHTPY--GGSWKDWPK----DLQLRC--HKTDNGRSFGSVYGRMVWEKPAP 279
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T +G G HP QDR I++RE A Q F +YKF D +++
Sbjct: 280 TMTTQCTGLGN-GRFGHPIQDRAISIREAALIQTFPMTYKFFADEEYV 326
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 59 FSSPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
+ + YK+ P FQ +R M L H +K S + +P + G+D LP
Sbjct: 1197 YGTEYKTGPQNRFQMWMRNGMGDNKLQGHYTKRFSLRAVEATTTVPLEEGADHTSLP--- 1253
Query: 117 VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
+ L P K K +GRL +G+F ++T P HP+Q R++TVR
Sbjct: 1254 -LALQPGHRVEPKTK----KSFYGRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVTVR 1308
Query: 177 ECARSQGFSDSYKF 190
E ARSQGF D+Y F
Sbjct: 1309 ELARSQGFPDNYVF 1322
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V++ I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQEAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 325
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 21 AVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---G 77
A + N +A+ + I DLP V N S G + P FQK IR
Sbjct: 579 AYSTNENCQLAKALNLEGAINDLPPVENDDSDDERSYG------TTPRTDFQKYIRLQRS 632
Query: 78 DML------------VLNDHISKAMSELNLIRCQKIPKQPGSDWR----VLPSEKVVDLI 121
+M+ +L DH ++ + R IPK+ G+++R VL E V+
Sbjct: 633 EMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVKENKVEWD 692
Query: 122 PWC-----------LPNTAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPN 168
P +P+ A FGRL W+ T VT P V HP
Sbjct: 693 PSVERVYLKSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQV--LLHPE 750
Query: 169 QDRIITVRECARSQGFSDSYKFVGDIQH 196
QDR++++RE AR QGF D YK G ++
Sbjct: 751 QDRVLSIRENARLQGFPDCYKLCGPVKQ 778
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNHIQSSYQALMRKNSPKLYNHKATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +G L+W P
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGHLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGN 325
>gi|307704025|ref|ZP_07640957.1| cytosine methyl transferase [Streptococcus mitis SK597]
gi|307622416|gb|EFO01421.1| cytosine methyl transferase [Streptococcus mitis SK597]
Length = 351
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 38/161 (23%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR IGDLP + G +++P+ D+L H ++ +S++N
Sbjct: 188 TVRQAIGDLPKLNAG--------------ETDPL---------DLL----HTARNLSDIN 220
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS-VT 153
L R + +PG WR + L+P C E + ++GRL+W+ P+S +T
Sbjct: 221 LSRIRS--SKPGGTWRDWDNS----LLPECF--KKESGATYGSVYGRLEWDK--PSSTIT 270
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
P G HP QDR +++RE A Q F +Y+F+ D+
Sbjct: 271 TQFPGYGNGRFGHPEQDRALSLREGAILQSFPRTYQFINDV 311
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+A+ + D I DLP V N S + G + P FQK IR D++
Sbjct: 607 KALYLGDAILDLPPVNNDESQDERKYG------TTPQSDFQKYIRLKKSDVVGFATDKNA 660
Query: 81 ----VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---------------EKVVDLI 121
+L DH +++ + R ++PK+ G+++R P E+V L+
Sbjct: 661 SHPQMLYDHRPLKLNDDDYQRVCRVPKKKGANFRDFPGVLVGTDNKVEWDPAVERV--LL 718
Query: 122 PWCLPNTAEKHNQW-KGL----FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
P P + + +G FGRL W+ T VT P + HP QDR++++R
Sbjct: 719 PSGKPLVPDYAMSFVRGTSCKPFGRLWWDETVATVVTRAEPHNQI--VIHPMQDRVLSIR 776
Query: 177 ECARSQGFSDSYKFVGDIQH 196
E AR QGF D Y+ G ++
Sbjct: 777 ENARLQGFPDCYQLHGPVKE 796
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++++V++ I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVSVQEAISDL------AYLHSNEGAFESDYLNPIQSNYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 238 HSQSALEKLKLIDKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD Y F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRFITPREAARIQSFSDDYIFYGN 325
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 59 FSSPYKSEPVLWFQKKIRGDM--LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEK 116
+ + YK+ P FQ +R M L H +K S + +P + G+D LP
Sbjct: 1179 YGTEYKTGPQNRFQMWMRKGMGDNKLQGHYTKRFSLRAVEATTTVPLEEGADHTSLP--- 1235
Query: 117 VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
+ L P K K +GRL +G+F ++T P HP+Q R++TVR
Sbjct: 1236 -LALQPGHRVEPKTK----KSFYGRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVTVR 1290
Query: 177 ECARSQGFSDSYKF 190
E ARSQGF D+Y F
Sbjct: 1291 ELARSQGFPDNYVF 1304
>gi|420411400|ref|ZP_14910532.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393030189|gb|EJB31268.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
Length = 428
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
V+D I DL A + + E F S Y + +Q +R D L +H + S+
Sbjct: 262 NVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATNHSQAA 315
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + + I K+ G + CLP Q+K +GRL+W PT +
Sbjct: 316 LEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISPT-IDT 359
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 360 RFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 398
>gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella
pneumoniae]
Length = 375
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 39/174 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ +T+RD IG LP YK P + +HI ++
Sbjct: 192 KTLTIRDVIGQLPPP-------------PEDYKEHPDI-------------PNHIKCKIT 225
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++N R +P PG W+ +P DL C W ++GRL+W+ PT
Sbjct: 226 KINEERFSHVP--PGGGWKDIP----YDLRLKCHQKVDTASGGWPDVYGRLEWDKQCPTI 279
Query: 152 VT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEM 203
D G G HP+Q+R IT+RE A QGF +Y+F G+ I RL++
Sbjct: 280 TAGFDSFTRGRYG---HPSQNRAITLREGAMLQGFPVNYRFYGNRDAI--RLQI 328
>gi|346994624|ref|ZP_08862696.1| modification methylase HgiDII [Ruegeria sp. TW15]
Length = 365
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG +PA+ G S + +P+ H + +S+LN
Sbjct: 185 TVRDAIGTMPALKQGQS-----------SEDDPL----------------HAAARLSDLN 217
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + +PG WR P E L+ C + + + G++GR+ W+ PT T
Sbjct: 218 LERIRA--SRPGGTWRDWPQE----LVAEC--HRKDSGRTYPGVYGRMVWDAPSPTMTTQ 269
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G HP QDR IT+RE A QGF Y FV
Sbjct: 270 FFGFGNGRF-GHPEQDRAITLREGAILQGFPLDYSFV 305
>gi|448429916|ref|ZP_21584687.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445689621|gb|ELZ41849.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 403
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 36 VRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNL 95
V D IGDLP VG G + T Y +EP Q+ +RGD+ L H + S+ +
Sbjct: 196 VIDGIGDLPEVGPGETKTE--------YDAEPETVIQRDLRGDVDDLTHHQAANHSDDMV 247
Query: 96 IRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDP 155
I G + +P E L ++ HN + RLD E ++T
Sbjct: 248 EMLSHISD--GGNRTEIPDE---------LQPSSGYHNSYS----RLDSE-EPAVAITSN 291
Query: 156 HPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP QDR +T RE AR Q F DSY+F G
Sbjct: 292 MSKPSSARCVHPFQDRGLTPREGARLQTFPDSYRFEG 328
>gi|85709919|ref|ZP_01040984.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1]
gi|85688629|gb|EAQ28633.1| site-specific DNA-methyltransferase [Erythrobacter sp. NAP1]
Length = 356
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 50/203 (24%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI 86
N A++V D IG+LP + G S D L H+
Sbjct: 186 NAGRTAAVSVLDAIGELPKLAAGESHAD-----------------------DSL----HV 218
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG 146
+ ++SELNL R + +PG WR P E L C + K + G++ R+ W+
Sbjct: 219 ASSLSELNLRRIRA--SKPGGTWRDWPME----LRAACHRKPSGK--TYPGVYARMTWDD 270
Query: 147 NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF--------VGDIQHII 198
PT T + G G HP+QDR I++RE A Q F Y+F + ++ I
Sbjct: 271 PSPTMTTQCYGFGN-GRFGHPDQDRAISLREAAILQSFPPDYQFLPKAEKPSLKEVGRWI 329
Query: 199 GRL------EMLFHLLWRLHWGE 215
G E + H + +LH+G+
Sbjct: 330 GNAVPVKLGEAIGHEIVQLHYGD 352
>gi|420495132|ref|ZP_14993697.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393113265|gb|EJC13784.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
Length = 481
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 310 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKNSPKLYNHQATN 363
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 364 HSQAASEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 408
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 409 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 451
>gi|126668652|ref|ZP_01739604.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
gi|126626911|gb|EAZ97556.1| C-5 cytosine-specific DNA methylase [Marinobacter sp. ELB17]
Length = 347
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 36/162 (22%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P + TVR TIG+LP++ G ++ D L HIS
Sbjct: 183 PKKYRTVRQTIGNLPSLRAG-----------------------EQCLKDRL----HISAG 215
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S +NL R + +PG WR P L+ C K + ++ R+ W+ P
Sbjct: 216 LSSINLTRIKH--SKPGGTWRDWPE----SLMAECHRKATGK--TYVSVYARMSWDKVSP 267
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T T + G G HP+QDR I++RE A Q F SY+F+
Sbjct: 268 TITTQSYGFGN-GRFGHPDQDRAISLREAAMLQTFPKSYQFI 308
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD---IQ 195
+ RL G+F T VT+ P HPNQ+R+++VRE AR+QGF D +KFVG+ +Q
Sbjct: 602 YRRLKMNGHFATLVTNVRPTAKQSQVLHPNQNRLVSVREQARAQGFPDDFKFVGNAMAMQ 661
Query: 196 HIIG 199
IG
Sbjct: 662 RQIG 665
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ + + D I DL + + F S Y EP +QK +R + L +HI+ S
Sbjct: 158 KKVNIEDAISDLNYLNSNQG------EFESNYLLEPKSEYQKMMRKNSNKLYNHITTNHS 211
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++ L + IP + G ++ L N + ++ +GRL W+ PT
Sbjct: 212 KIALKKLALIPAECGKEY---------------LSNELKGKQKFNTTWGRLKWKEPSPT- 255
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ GT HP +R IT RE AR Q F D++ F+G+ I ++
Sbjct: 256 IDTRFDTPSNGTNSHPVLNRTITPREAARIQSFDDNFCFLGNKTEICKQI 305
>gi|416218177|ref|ZP_11624725.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169]
gi|416237532|ref|ZP_11631042.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1]
gi|416249790|ref|ZP_11636887.1| DNA-cytosine methyltransferase [Moraxella catarrhalis CO72]
gi|326559835|gb|EGE10235.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 7169]
gi|326569677|gb|EGE19729.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC1]
gi|326575962|gb|EGE25885.1| DNA-cytosine methyltransferase [Moraxella catarrhalis CO72]
Length = 339
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H+S +SELN++R K KQ GS WR P E L+ C ++ K + ++GR+ W
Sbjct: 208 HLSSGLSELNMMRI-KASKQGGS-WRDWPEE----LVAECHKKSSGK--TYGSVYGRMSW 259
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+ PT T G G HP QDR I++RE A Q F + Y+F I
Sbjct: 260 DKPAPTMTTLCTGYGN-GRFGHPEQDRAISLREAAIFQTFPEDYQFAERI 308
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+T+ D I DL + +G E Y+ P ++KK+RG +L +H + S L
Sbjct: 185 VTIWDAISDLAFLESGEGDEVQE------YRYAPQSEYEKKLRGHANLLYNHKATKHSPL 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + IP P + VLP E + I + G + R+ + + ++T
Sbjct: 239 SLKRLRMIP--PNAGKEVLPKEHLTKSI-------------YSGTWTRMKKD-DISVTIT 282
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R ITVRE AR Q F D + F+G
Sbjct: 283 TRFDTPSSGKFTHPFLNRAITVREAARIQSFPDEFIFIG 321
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL W P
Sbjct: 238 HSKAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLSWNKVSP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP R IT RE AR Q FSD+ F G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNNIFYGN 325
>gi|393777972|ref|ZP_10366260.1| DNA-cytosine methyltransferase [Ralstonia sp. PBA]
gi|392715023|gb|EIZ02609.1| DNA-cytosine methyltransferase [Ralstonia sp. PBA]
Length = 360
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +SE+NL R K+ K PG WR P L+ C + E + G++ R++W
Sbjct: 222 HVTSTLSEINLKRI-KVSK-PGGTWRDWPEY----LLAEC--HRKESGKTYSGVYARMEW 273
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQ-HIIGR 200
+ PT T + G G HP QDR I++RE A Q F Y F+ G++ ++GR
Sbjct: 274 DKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAAILQSFPMDYAFIPQDGEVSFKVLGR 332
Query: 201 L 201
L
Sbjct: 333 L 333
>gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
Length = 399
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ V I DLP + TT +G + Y S P +QK R D++ + H+ M
Sbjct: 227 VNVEQAISDLPVL------TTKTIGITRSYASSPRSIYQKWSRQDIIETDGHVVPQMRPE 280
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
R ++I + G +WR LP E + IP+ L + + N + + RL +G+ PT
Sbjct: 281 TRKRLKEIVE--GGNWRDLP-EALTYKIPYKLNSGKLRRNHYSA-YRRLLSKGHSPTV-- 334
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G +H +R +T RE AR F+D YK
Sbjct: 335 ----QGHSDFAYHYAYERSLTPRELARLMSFTDDYKL 367
>gi|417862918|ref|ZP_12507968.1| DNA-cytosine methyltransferase [Agrobacterium tumefaciens F2]
gi|338820180|gb|EGP54154.1| DNA-cytosine methyltransferase [Agrobacterium tumefaciens F2]
Length = 614
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
++V + I DL AVG +++ Y+ P FQ +R +H +SE+
Sbjct: 209 VSVSEAIADL-AVGQADDKAVVKLA----YRGRPT-RFQSYVRDGNGFAPNHHGNHLSEV 262
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N R +P+ G W+ +P E + D + + L+GRL P+
Sbjct: 263 NRKRVATVPQ--GGCWKDIPPELLPDRFRRV------RLTDYATLYGRLHEAS--PSYTI 312
Query: 154 DPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVG 192
+ CF HP DR +TVRE AR QGF DS++F+G
Sbjct: 313 SAGFNNVTSGCFTHPIHDRALTVREGARLQGFRDSFEFLG 352
>gi|378709248|ref|YP_005274142.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|315268237|gb|ADT95090.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 350
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 67/157 (42%), Gaps = 36/157 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ V+D IG LP V E G S P D L H + MSEL
Sbjct: 187 VVVKDVIGHLPPV---------EAGQSHP--------------NDRL----HCASRMSEL 219
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R Q +PG W P+E L+ C + E + + ++GR+ W+ T T
Sbjct: 220 NLKRIQA--SKPGGTWHDWPAE----LVAKC--HKKESGSTYSSVYGRMSWDKVGATITT 271
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G G HP QDR +T+RE A Q F D Y+F
Sbjct: 272 QCIGFGN-GRFGHPEQDRALTLREAAILQTFPDHYEF 307
>gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101]
Length = 361
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 36/170 (21%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGD+P + S P + +H +++ N
Sbjct: 190 TVRDVIGDMPPPPSDCS-------------EHPDFF-------------NHAQTKITKRN 223
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R +P+ G W+ +P + +D C K W ++GRL W+G PT +T
Sbjct: 224 IERFSYVPQ--GGGWQDIPWDLRLD----CHKTADIKSGGWPDVYGRLSWDGQCPT-ITG 276
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD---IQHIIGRL 201
G HP Q+R +T RE AR QGF D++ G+ ++H IG +
Sbjct: 277 GFDSFTRGRYGHPEQNRALTPREAARLQGFPDNFILTGNRHQVRHQIGNV 326
>gi|207093118|ref|ZP_03240905.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ ++D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 63 PSQSVNIQDAISDL------AYLCSNEGAFESDYLNPVQSNYQALMRKDSPKLYNHQATN 116
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 117 HSQAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISP 161
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
T + GT HP R IT RE AR Q FS++Y
Sbjct: 162 T-IDTRFDTPSNGTNSHPKLHRSITPREAARIQSFSNNY 199
>gi|18542935|gb|AAL75760.1| Putative chromomethylase [Oryza sativa Japonica Group]
Length = 134
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
FGRL W+ PT VT P + HPNQ R++TVRE AR QGF D YK G I+
Sbjct: 12 FGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGPIKE 67
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI--RGDMLVLNDHISKA 89
+ ITV + I DLP + NGA + PY+++ L + R +++S+
Sbjct: 186 KIITVGEAINDLPIIENGAHCDAL------PYRNDIELSDYSLLMRRKSNKSTQNYVSRN 239
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ I K KQ G +WR +P + + N K+N G++ RL E + P
Sbjct: 240 ADYI--IERYKYIKQ-GQNWRSIPE--------FLMTNYKNKNNCHSGIYKRL--EEDKP 286
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+ V + M+ HP QDR ++VRE AR Q F D + F G I +I
Sbjct: 287 SVVISNYRKNML---IHPWQDRGLSVREAARLQSFPDDFVFEGTIHYI 331
>gi|218709639|ref|YP_002417260.1| cytosine-specific methyltransferase [Vibrio splendidus LGP32]
gi|218322658|emb|CAV18834.1| Cytosine-specific methyltransferase HgiDII; restriction system
[Vibrio splendidus LGP32]
Length = 355
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 36/159 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TV++ IG LP + G + K++P+ H S ++SEL
Sbjct: 187 VTVKEVIGHLPRLRAGCA-----------NKNDPL----------------HRSSSLSEL 219
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N+ R + +PG WR P E L C +T + + ++GR+ W PT T
Sbjct: 220 NMKRIK--ASKPGGTWRDWPEE----LRAKC--HTKDSGKGYASVYGRMSWNEPSPTMTT 271
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ G G HP+Q R I++RE A Q F D Y+FV
Sbjct: 272 QCYGFGN-GRFGHPSQARAISLREAAILQSFPDHYEFVA 309
>gi|304383753|ref|ZP_07366212.1| modification methylase HgiDII [Prevotella marshii DSM 16973]
gi|304335277|gb|EFM01548.1| modification methylase HgiDII [Prevotella marshii DSM 16973]
Length = 360
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P TV++TIGDLP + G + + D L H +KA
Sbjct: 195 PNEYKTVKETIGDLPELKAGETD-----------------------KNDSL----HRAKA 227
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LN+ R P G W+ P DL C + + + ++GR+ WE P
Sbjct: 228 LSPLNIERLHHTPY--GGSWKDWPK----DLQLRC--HKTDNGRSFGSVYGRMVWEKPAP 279
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T +G G HP QDR I++RE A Q F +YKF D +++
Sbjct: 280 TMTTQCTGLGN-GRFGHPIQDRAISIREAALIQTFPMTYKFFADEEYV 326
>gi|397171051|ref|ZP_10494461.1| DNA-cytosine methyltransferase [Alishewanella aestuarii B11]
gi|396087525|gb|EJI85125.1| DNA-cytosine methyltransferase [Alishewanella aestuarii B11]
Length = 349
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H ++++N+ R +P+ G W+ +P DL C K W ++GRL
Sbjct: 199 NHQRARVTQINIERFSHVPQ--GGGWQDIP----FDLRLECHKKADTKSGGWPDVYGRLL 252
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
W G PT +T G HP Q+R +T RE AR QGF DS F G Q +
Sbjct: 253 WNGQCPT-ITGGFDSFTRGRYGHPLQNRPLTPREAARLQGFPDSVNFQGSRQEV 305
>gi|420466367|ref|ZP_14965124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393084765|gb|EJB85453.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 428
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
V+D I DL A + + E F S Y + +Q +R + L +H + S+
Sbjct: 262 NVQDAISDL------AYLCSNEGAFESDYLNPIQSNYQALMRKNSPKLYNHQATNHSQAA 315
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + + I K+ G + CLP Q+K +GRL+W PT +
Sbjct: 316 LEKLKLIEKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKVSPT-IDT 359
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 360 RFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 398
>gi|443289098|ref|ZP_21028192.1| Modification methylase HgiDII [Micromonospora lupini str. Lupac 08]
gi|385887776|emb|CCH16266.1| Modification methylase HgiDII [Micromonospora lupini str. Lupac 08]
Length = 365
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 36/162 (22%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P TVR IG LP +GNG + + GD L H S+
Sbjct: 186 PAEYTTVRQAIGSLPPIGNGETHS-----------------------GDPL----HKSRT 218
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
++ LNL R ++ PG W P E L C + ++ ++ R+ W+ P
Sbjct: 219 LTPLNLERIKR--SSPGGSWEEWPEE----LRAPC--HRKASGATFRNVYARMMWDEPSP 270
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T T + G G HP QDR +T+RE A Q F + Y+FV
Sbjct: 271 TITTLAYSFG-AGRFGHPEQDRAMTLREAAILQSFPEDYEFV 311
>gi|428300014|ref|YP_007138320.1| Xre family transcriptional regulator [Calothrix sp. PCC 6303]
gi|428236558|gb|AFZ02348.1| transcriptional regulator, XRE family [Calothrix sp. PCC 6303]
Length = 484
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGF-SSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
AITV + I DLP V G TT + S+PY+ L+ IR L H + A S
Sbjct: 322 AITVDEAIHDLPEVEAGGRATTYQCDIESTPYE----LF----IRNGAQQLKMHEATAHS 373
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD-WEGNFPT 150
R +I +Q G++ LP V C + RL+ E +
Sbjct: 374 P----RMLEIIRQAGANIYALPEGVVKSGFSSC--------------YSRLNGAEPSVTL 415
Query: 151 SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+V HP C HP+Q R +T RE AR QGF D+++F+G I+ ++
Sbjct: 416 TVNFVHPAS--NRCIHPHQHRALTPREGARLQGFLDTFEFIGTRSQIVKQI 464
>gi|334345632|ref|YP_004554184.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102254|gb|AEG49678.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 368
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVR IG LP V GAS +P+ H S +++
Sbjct: 195 MTVRQAIGQLPRVAAGASCP-----------DDPL----------------HASAGLTDT 227
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N+ R + +PG WR P E L C + E + ++GR++W+ PT T
Sbjct: 228 NMSRIRA--SKPGGTWRDWPEE----LRAAC--HRKETGKTYPSVYGRMEWDKPAPTMTT 279
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ G G HP QDR IT+RE A Q F Y F+
Sbjct: 280 QCYGFGN-GRFGHPEQDRAITLREAAIIQSFPPEYSFLA 317
>gi|420411057|ref|ZP_14910193.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393026270|gb|EJB27370.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 405
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 22/167 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
V+D I DL A + + E F S Y + +Q +R + L +H + S+
Sbjct: 233 NVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATNHSQAA 286
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + + I K+ G + CLP Q+K +GRL+W PT +
Sbjct: 287 LEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISPT-IDT 330
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
GT HP R IT RE AR Q FSD+Y F G+ + ++
Sbjct: 331 RFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGNKTSVCKQI 377
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+T+ D I DL + +G E Y+ P ++KK+RG +L +H + S L
Sbjct: 145 VTIWDAISDLAFLESGEGDEVQE------YRYAPQSEYEKKLRGHANLLYNHKATKHSPL 198
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + IP P + VLP E + I + G + R+ + + ++T
Sbjct: 199 SLKRLRMIP--PNAGKEVLPKEHLTKSI-------------YSGTWTRMKKD-DISVTIT 242
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R +TVRE AR Q F D + F+G
Sbjct: 243 TRFDTPSSGKFTHPFLNRALTVREAARIQSFPDEFIFIG 281
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1217
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 40/191 (20%)
Query: 28 GAPFRAITVRDTIGDLPAV---------------GNG--------ASVTTMEVGFSSP-- 62
GAP R++ + + I DLP +G + ++ VGF P
Sbjct: 988 GAPLRSVRLGEAISDLPRFHWADPRASKKSRQREDDGVPALDAIPSKTSSPYVGFQIPTK 1047
Query: 63 YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLI-RCQKIPKQPGSDWRVLPSEKVVDLI 121
Y EP +Q+++R L + +N++ R IP +P + LP
Sbjct: 1048 YAKEPQNRYQREMREGSGDLVRYQYTPRFGVNVVERSVNIPMRPNVNHHDLPK------- 1100
Query: 122 PWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
W KH + GRLD + T++T P HPNQ RI+TVRE AR
Sbjct: 1101 -WL--QFESKHTTY----GRLDASQYYATAMTTFTPNSSGSRLLHPNQRRILTVREVARG 1153
Query: 182 QGFSDSYKFVG 192
QGF D Y+ +
Sbjct: 1154 QGFPDDYELLS 1164
>gi|347726860|gb|AEP19808.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ++ V+D I DL +G+ +E + +P +S ++ +R D L +H +
Sbjct: 184 PSLSVNVQDAISDLAYLGSNEG--AIESDYLNPIQSS----YEALLRKDSPKLYNHQAAN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
SE + + I K+ G + C+P Q+K +GRL+W P
Sbjct: 238 HSEAAFEKLKLINKEQGKE---------------CMPKNLHGKQQFKSTWGRLNWNKISP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + GT HP+ R IT RE AR Q FSD Y G+
Sbjct: 283 T-IDTRFDTPSNGTNSHPDFHRSITPREAARIQSFSDKYILYGN 325
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 57 VGF-SSPYKSEPVLWFQKKIRG----DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRV 111
GF S+PY + P +Q+++R M H + S + + R + +PG+ +
Sbjct: 584 TGFASTPYATPPNTSYQQRMRAFGGKIMTRTRQHQTSGYSAIMVERVVNVALEPGATYD- 642
Query: 112 LPSEKVVDLIPWCLPN-------TAEKHNQWKG---LFGRLDWEGNFPTSVTDPHPMGMV 161
W LP+ + ++ +W+ F RLD +G F T +
Sbjct: 643 ----------SWSLPSVNKPALLSLDQTERWRNEHFKFERLDSDGYFKILTTK---VRGE 689
Query: 162 GTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
G+ HP Q R++TVRECAR+QGF D F D
Sbjct: 690 GSMLHPTQRRLLTVRECARAQGFPDWVDFACD 721
>gi|419632144|ref|ZP_14164704.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|419684114|ref|ZP_14212724.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
1577]
gi|380609405|gb|EIB29075.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|380667472|gb|EIB82911.1| DNA-cytosine methyltransferase [Campylobacter jejuni subsp. jejuni
1577]
Length = 349
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 35/159 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG LP + +G K++P+ HI+K +S LN
Sbjct: 187 TVRDAIGFLPKIKSGEQS-----------KTDPL----------------HIAKPLSGLN 219
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + PK GS W+ P LI C + E + ++GR+ WE PT T
Sbjct: 220 LERIKATPKNGGS-WKDWPEH----LILKC--HKKESGKNFGSVYGRMKWEEPSPTMTTF 272
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+G G HP Q+R I++RE + Q F Y F+ +
Sbjct: 273 CTSLGN-GRFGHPEQNRAISLREASLLQTFPLDYDFIDN 310
>gi|421717606|ref|ZP_16156908.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407223113|gb|EKE92906.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 584
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+++ V+D I DL A + + E F S Y + +Q +R + L +H + S
Sbjct: 415 QSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATNHS 468
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ L + + I K+ G + CLP Q+K +G L+W PT
Sbjct: 469 QAALEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGHLNWNKISPT- 512
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+ GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 513 IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 554
>gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1333
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 63/218 (28%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI------------ 75
G P RA+TVRD IG+LP + G G + P+ +Q+++
Sbjct: 1066 GTPLRAVTVRDAIGNLPPITPGTK------GDPAVPLPRPMSAYQRRLAEAATAGWQRSA 1119
Query: 76 ------------RGDMLVLNDHIS-KAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD--- 119
VL DH++ + +SE + +P PG D L +K+
Sbjct: 1120 DGAGYADGGVGGGAPPPVLADHVTPRVLSEFHAKAASLVP--PGMDI-FLVKDKLKGAGD 1176
Query: 120 ---------------------LIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM 158
L W L N ++ + G++GRL F T+ T +
Sbjct: 1177 MTAAAAQQLSAATAGQTPEQYLERWKLLNNLKRRKRRSGMYGRLCHTSYFRTATTK---V 1233
Query: 159 GMVGTCFHPN--QDRIITVRECARSQGFSDSYKFVGDI 194
G+ G HP+ Q R ++VRE ARSQGF D ++F G +
Sbjct: 1234 GVDGWSLHPDLDQQRTVSVREVARSQGFPDQHRFKGSV 1271
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV----------L 82
A+T+ D I DLP V N + ++P K++ + K R + L+ L
Sbjct: 539 ALTLADAISDLPPVTNSEANDVRNYNDAAP-KTDFENFISLK-RSETLLPVCGGDPARRL 596
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV---------------VDLIPWCLPN 127
DH + + +L R IPK+ G+++R +P V + +P+
Sbjct: 597 FDHHPLELRDDDLERISYIPKKKGANFRDMPGVLVHNNKAQLNLRVKRAKLKSGKNVVPD 656
Query: 128 TAEK--HNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
A + K FGRL W+ T VT P HP Q+R+++VRE AR QGF
Sbjct: 657 YAVSFIKGKSKKPFGRLWWDEIVNTVVTRAEPHNQC--VIHPMQERVLSVRENARLQGFP 714
Query: 186 DSYKFVGDIQH 196
D YK G I+
Sbjct: 715 DCYKLCGSIKE 725
>gi|417545734|ref|ZP_12196820.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC032]
gi|400383622|gb|EJP42300.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC032]
Length = 338
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ ++E+NL R + PG WR P +DL C + + + ++GR++W
Sbjct: 207 HVASNLTEINLKRIRA--SIPGGTWRDWP----IDLRAECHKKASGR--SYPAVYGRMEW 258
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T + G G HP QDR I++RE A Q F Y+F+ Q++ +GR
Sbjct: 259 DKPAPTMTTLCYGYGN-GRFGHPEQDRAISLREAALFQTFPKDYQFIPPTQYVNIKSVGR 317
Query: 201 L 201
+
Sbjct: 318 M 318
>gi|421709451|ref|ZP_16148811.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421722705|ref|ZP_16161964.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407212008|gb|EKE81873.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407226489|gb|EKE96255.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 371
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
V+D I DL A + + E F S Y + +Q +R + L +H + S+
Sbjct: 205 NVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATNHSQAA 258
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + + I K+ G + CLP Q+K +GRL+W PT +
Sbjct: 259 LEKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKISPT-IDT 302
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
GT HP R IT RE AR Q FSD+Y F G+
Sbjct: 303 RFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIFYGN 341
>gi|365128270|ref|ZP_09340555.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623307|gb|EHL74431.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 359
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 64/157 (40%), Gaps = 36/157 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IG LP + G + D L HIS A+S +
Sbjct: 184 LTVRDAIGSLPRISAGEANEN-----------------------DRL----HISPALSPI 216
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R Q PG WR P V++ + E + ++GR+ W+ PT T
Sbjct: 217 NLERIQH--SVPGGTWRDWPERLVLNC------HKKEGGKTYASVYGRMKWDDLSPTITT 268
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G G HP QDR IT+RE A Q F Y+F
Sbjct: 269 QFIGYG-TGRFGHPEQDRAITLREGAILQSFPPDYQF 304
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI---RGDMLVLN------ 83
A+T+ D DLP VT E + Y EP FQK I R D L+ N
Sbjct: 479 ALTLGDATSDLP------EVTNFEEREAINYDIEPETEFQKFISLPRADTLISNGEEESQ 532
Query: 84 -----DHISKAMSELNLIRCQKIPKQPGSDWR----VLPSEKVVDLIPWC---------- 124
DH M++ + R I K+ G+ + V+ +K V + P
Sbjct: 533 LRILYDHQPLQMNKDDYQRACNISKKKGAYFTDLGGVVFEDKTVRIDPSVERVILPSGKP 592
Query: 125 -LPNTA--EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
+PN A + + K FGRL ++ T VT P HP Q+R+++ RE AR
Sbjct: 593 MVPNYAITYRDGKSKKPFGRLWYDEIINTVVTRAQPHNQC--VLHPKQNRVLSARENARL 650
Query: 182 QGFSDSYKFVGDIQH 196
QGF D Y+ G +
Sbjct: 651 QGFPDCYRLYGPVDE 665
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 37/194 (19%)
Query: 33 AITVRDTIGDLPAVGNG----------ASVTTMEVGFSSPYKSEPVLWFQKKIRGD-MLV 81
A+T+ D I DLP V N A+ T F S +SE +L GD
Sbjct: 484 ALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPV---CGGDPARR 540
Query: 82 LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV-------------------VDLIP 122
L DH + + +L R IPK+ G+++R +P V +++P
Sbjct: 541 LFDHQPLELRDDDLERISYIPKKKGANFRDMPGVLVHNNKAQLNLRVKRAKLKSGKNVVP 600
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+ + + K FGRL W+ T VT P HP Q+R+++VRE AR Q
Sbjct: 601 AYAVSFIK--GKSKKPFGRLWWDEIVNTVVTRAEPHNQC--VIHPMQERVLSVRENARLQ 656
Query: 183 GFSDSYKFVGDIQH 196
GF D YK G I+
Sbjct: 657 GFPDCYKLCGSIKE 670
>gi|432434200|ref|ZP_19676618.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE187]
gi|432847254|ref|ZP_20079674.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE141]
gi|433210097|ref|ZP_20393755.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE97]
gi|430949555|gb|ELC68986.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE187]
gi|431391614|gb|ELG75224.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE141]
gi|431727721|gb|ELJ91460.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE97]
Length = 348
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 38/158 (24%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IG+LP++ E G + P +P+ H + +SE+
Sbjct: 183 LTVRDCIGNLPSI---------EAGQADP--KDPL----------------HKASRLSEI 215
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQ-WKGLFGRLDWEGNFPTSV 152
NL R + +PG WR P+E LI C A+K Q + ++GR+ W+ PT
Sbjct: 216 NLKRI--LHSKPGGTWRDWPAE----LIASC---HAKKSGQGYASVYGRMSWDKPSPTIT 266
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
T + G G HP Q R I++RE A Q F +Y F
Sbjct: 267 TLCYGFGN-GRFGHPEQHRAISLREAALLQTFPVTYSF 303
>gi|309790719|ref|ZP_07685269.1| site-specific DNA-methyltransferase [Oscillochloris trichoides
DG-6]
gi|308227250|gb|EFO80928.1| site-specific DNA-methyltransferase [Oscillochloris trichoides DG6]
Length = 368
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +SELNL R Q +PG WR E + D C + K + ++GR++W
Sbjct: 222 HTAPTLSELNLRRIQA--SRPGGTWRDWDEELIAD----CHRKGSGK--TYPSVYGRMEW 273
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T G G HP QDR I++RE A Q F ++Y FV + + +GR
Sbjct: 274 DMPSPTITTQCFGFGN-GRFGHPEQDRAISLREAAILQTFPEAYNFVAPGESVSFSRLGR 332
Query: 201 L 201
L
Sbjct: 333 L 333
>gi|302520399|ref|ZP_07272741.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78]
gi|302429294|gb|EFL01110.1| DNA cytocine methyl transferase [Streptomyces sp. SPB78]
Length = 434
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 85/210 (40%), Gaps = 54/210 (25%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPF--------------RAITVRDTIGDLPAVG 47
H+ T K L + A V +TA+G P ++TVR IG LPA+
Sbjct: 198 HILT----KFGLPQQRERALVVATASGLPAYTLEDLWHGYSLREESLTVRRAIGHLPAI- 252
Query: 48 NGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGS 107
G P+ +H S A++ +L R IP GS
Sbjct: 253 --------RAGEKHPHD------------------ENHTSSALAGESLARIAAIPHDGGS 286
Query: 108 DW----RVLPSEKVVDLIPWCLPNT-AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVG 162
W R +EK LIP A + N + ++GR+ W PT + +G G
Sbjct: 287 -WADLLRTPETEKY--LIPSMRKAIEAGRLNAYSDVYGRMYWHRPAPTIKRECSHVGN-G 342
Query: 163 TCFHPNQDRIITVRECARSQGFSDSYKFVG 192
HP QDR+ TVRE A GF ++YKF+G
Sbjct: 343 RYAHPEQDRLCTVRELAILNGFPENYKFIG 372
>gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 384
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
N H S+ +S+L+L R + +P PG + + LP DL P C + L GRL
Sbjct: 237 NLHNSRNVSKLSLERYRHVP--PGGNRKDLPE----DLQPDCWRYKDPRGGGSTDLMGRL 290
Query: 143 DWEG---NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
+W+ T P G HP DR ITVRE AR Q F D +KF G + +
Sbjct: 291 EWDAPSLTIRTQFLKPEK----GRYLHPAADRSITVREGARLQTFPDDFKFTGSVFQTVK 346
Query: 200 RL 201
++
Sbjct: 347 QI 348
>gi|419092847|ref|ZP_13638138.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC4C]
gi|419222087|ref|ZP_13765011.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8E]
gi|432392314|ref|ZP_19635151.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
gi|377943397|gb|EHV07115.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC4C]
gi|378065647|gb|EHW27790.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8E]
gi|430919317|gb|ELC40257.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
Length = 346
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 36/160 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R +TV+D IG LP VG G + +S+P+ H S +
Sbjct: 182 RKVTVKDAIGRLPKVGAGEKL-----------ESDPL----------------HRSPKLM 214
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++NL R + PG W P E D + +K ++GR+ W+ PT
Sbjct: 215 DINLKRI--MHSLPGGTWDDWPEEIRADC------HKKNSGATYKSVYGRMVWDDTSPTI 266
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T + G G HP Q+R IT+RE A Q F YKF+
Sbjct: 267 TTQCYGYGN-GRFGHPEQNRAITLREAAILQSFPMDYKFL 305
>gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b]
Length = 374
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
N H S+ +S+L+L R + +P PG + + LP DL P C + L GRL
Sbjct: 227 NLHNSRNVSKLSLERYRHVP--PGGNRKDLPE----DLQPDCWRYKDPRGGGSTDLMGRL 280
Query: 143 DWEG---NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
+W+ T P G HP DR ITVRE AR Q F D +KF G + +
Sbjct: 281 EWDAPSLTIRTQFLKPEK----GRYLHPAADRSITVREGARLQTFPDDFKFTGSVFQTVK 336
Query: 200 RL 201
++
Sbjct: 337 QI 338
>gi|374813193|ref|ZP_09716930.1| DNA-cytosine methyltransferase [Treponema primitia ZAS-1]
Length = 349
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSD--WRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
H S ++SE NL R QK P G+ W+ P ++ +K N +K ++GR+
Sbjct: 215 HRSASISENNLKRLQKTPHNGGTRLAWKDDPDLQINAY--------KDKDNIFKDVYGRM 266
Query: 143 DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
WE PT T + + G HP QDR +++ E A Q FS+ Y F G+ ++ R
Sbjct: 267 KWEEPAPTITTRFNSISN-GRFGHPEQDRALSLLEGALLQTFSEKYYFSGNTDSVVAR 323
>gi|220909632|ref|YP_002484943.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
gi|219866243|gb|ACL46582.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
Length = 359
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 35/169 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R TVRDTI LP + GA ++ H+ ++S
Sbjct: 188 RKFTVRDTISHLPPLKAGAIDPNDKM---------------------------HVCPSVS 220
Query: 92 ELNLIRCQKIPKQPGS------DWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWE 145
L R + IPK GS D + +EK LIP NT + + ++GRL W+
Sbjct: 221 PTVLNRIRAIPKDGGSWGDVMNDPNLSDNEKKQLLIPSMF-NTKRRKGSFPDVYGRLKWD 279
Query: 146 GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T + +G G HP QDR++TVRE A QGF Y F G +
Sbjct: 280 ELAATITRECGHVGN-GRYTHPEQDRLLTVREMALLQGFPKEYIFEGAL 327
>gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
Length = 366
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR I DLPA+ G + ++ P L +H + +SELN
Sbjct: 203 TVRHAIEDLPAIAAGET-------YNDPK------------------LPNHRASHLSELN 237
Query: 95 LIRCQKIPKQPG--SDWRVLPSEKVVDLIPWCLPNTAEK---HNQWKGLFGRLDWEGNFP 149
+ R + P G +DW +L P C T +K H +GR+ W+
Sbjct: 238 MRRIKASPHDGGGRNDW-------PKNLWPSCYTRTNKKGEVHPGHTDCYGRMWWDKP-A 289
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T +T G HP QDR I+VRE AR QGF DS++F G I +
Sbjct: 290 TGLTTRCVSYSNGRFGHPVQDRAISVREAARLQGFDDSFEFTGSINSM 337
>gi|421593952|ref|ZP_16038439.1| DNA methylase C-5 cytosine-specific family protein [Rhizobium sp.
Pop5]
gi|403699980|gb|EJZ17289.1| DNA methylase C-5 cytosine-specific family protein [Rhizobium sp.
Pop5]
Length = 605
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 71 FQKKIR-GDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
FQ +R GD N H S +SE+N R +P+ G W+ +P E + D
Sbjct: 232 FQSFVRDGDGYAPNQH-SSNLSEINRKRVATVPQ--GGSWKDIPPELLPDRFRRV----- 283
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSY 188
+ + L+GRL P + CF HP DR +TVRE AR QGF DS+
Sbjct: 284 -RLTDYATLYGRLHEAS--PAYTISAGFNNVTSGCFTHPIHDRALTVREGARLQGFRDSF 340
Query: 189 KFVG 192
+F+G
Sbjct: 341 EFLG 344
>gi|398861091|ref|ZP_10616728.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM79]
gi|398233694|gb|EJN19606.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM79]
Length = 355
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 36/160 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+A+TVRD IG LPA+ G K D L H + ++S
Sbjct: 193 KAVTVRDVIGGLPALTAGG-----------------------KDPNDAL----HYASSLS 225
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
ELNL R + PG WR P L C + + ++GR++W+ PT
Sbjct: 226 ELNLQRIEA--SVPGGTWRDWPEA----LQAAC--HKKSTGATYPSVYGRMEWDKPGPTI 277
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T G G HP Q+R I++RE A Q F +Y+FV
Sbjct: 278 TTQCFGYGN-GRFGHPVQNRAISLREAAMLQTFPQNYQFV 316
>gi|344240108|gb|EGV96211.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 85
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
MG G HP Q R+++VRECARSQGF D+Y+F G I
Sbjct: 1 MGKQGRVLHPEQHRVVSVRECARSQGFRDTYRFFGSI 37
>gi|111220172|ref|YP_710966.1| DNA modification methylase [Frankia alni ACN14a]
gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific
methyltransferase) [Frankia alni ACN14a]
Length = 401
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
N H S+ +S L+L R + IP PG + + LP + L P C + L GRL
Sbjct: 256 NLHNSRNVSALSLERYRHIP--PGGNRKNLP----LHLQPDCWKYKDPRGGGSTDLMGRL 309
Query: 143 DWEG---NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
+W+ T P G HP DR ITVRE AR Q F D ++FVG I+
Sbjct: 310 EWDAPSLTIRTQFLKPEK----GRYLHPEADRSITVREGARLQTFPDDFQFVGSTFQIVK 365
Query: 200 RL 201
++
Sbjct: 366 QI 367
>gi|300925889|ref|ZP_07141727.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
gi|300418041|gb|EFK01352.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 182-1]
Length = 380
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 36/156 (23%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG+LP + GA GD L H S ++S++N
Sbjct: 220 TVRDIIGNLPEISAGAVHA-----------------------GDKL----HRSASLSDIN 252
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R + +PG WR P E L C +T E + + ++GR+ W+ PT T
Sbjct: 253 IKRI--MASKPGGTWRDWPEE----LRAKC--HTKESGSTYTAVYGRMCWDKLGPTITTQ 304
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G G HP Q+R +++RE A Q F + Y+F
Sbjct: 305 CIGYGN-GRFGHPVQNRALSLREAALLQSFPEKYEF 339
>gi|416119856|ref|ZP_11594967.1| DNA-cytosine methyltransferase [Campylobacter concisus UNSWCD]
gi|384576884|gb|EIF06199.1| DNA-cytosine methyltransferase [Campylobacter concisus UNSWCD]
Length = 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 85 HISKAMSELNLIRCQKIPKQPGS--DWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
HIS ++++N+ R ++ KQ GS DW +L+P C T+ + +K ++GR+
Sbjct: 208 HISPMLTDINIKRIKQ-SKQGGSWHDWDE-------ELLPNCYKKTSGQ--SYKSVYGRM 257
Query: 143 DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
W+ PT T G G HP QDR I++RE A Q F Y+F+ + + I
Sbjct: 258 SWDDVAPTLTTQFINYG-TGRFGHPEQDRAISLREGALLQSFPIEYQFIDEDEKI 311
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+++T+ D I DL + +G E + P +S +Q+++R D +L +H + S
Sbjct: 183 KSVTIWDAISDLAFLESGDG--EEEQNYLFPAQSN----YQQELRSDSKILYNHKATNHS 236
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++ L R + IP+ G D LP E + I K+ Q + R D P+S
Sbjct: 237 KIALERLKMIPENSGKDS--LPEEHLTKSIYSGTWERMRKNEQSVTITTRFDT----PSS 290
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R ITVRE AR Q F DS+ F G
Sbjct: 291 ----------GKFTHPFLNRAITVREAARLQSFPDSFIFFG 321
>gi|404377314|ref|ZP_10982449.1| DNA (cytosine-5-)-methyltransferase [Escherichia sp. 1_1_43]
gi|417310487|ref|ZP_12097300.1| DNA (Cytosine-5-)-methyltransferase [Escherichia coli PCN033]
gi|419280317|ref|ZP_13822557.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10E]
gi|419378068|ref|ZP_13919080.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14B]
gi|419383456|ref|ZP_13924393.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14C]
gi|419388708|ref|ZP_13929567.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14D]
gi|226838577|gb|EEH70606.1| DNA (cytosine-5-)-methyltransferase [Escherichia sp. 1_1_43]
gi|338767896|gb|EGP22703.1| DNA (Cytosine-5-)-methyltransferase [Escherichia coli PCN033]
gi|378124276|gb|EHW85685.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10E]
gi|378214163|gb|EHX74471.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14B]
gi|378223734|gb|EHX83948.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14C]
gi|378226887|gb|EHX87068.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14D]
Length = 349
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 36/156 (23%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG+LP + GA GD L H S ++S++N
Sbjct: 189 TVRDIIGNLPEISAGAVHA-----------------------GDKL----HRSASLSDIN 221
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R + +PG WR P E L C +T E + + ++GR+ W+ PT T
Sbjct: 222 IKRI--MASKPGGTWRDWPEE----LRAKC--HTKESGSTYTAVYGRMCWDKLGPTITTQ 273
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G G HP Q+R +++RE A Q F + Y+F
Sbjct: 274 CIGYGN-GRFGHPVQNRALSLREAALLQSFPEKYEF 308
>gi|302343998|ref|YP_003808527.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075]
gi|301640611|gb|ADK85933.1| DNA-cytosine methyltransferase [Desulfarculus baarsii DSM 2075]
Length = 371
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 40/174 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R TV++ IG+LP +E G S P +P+ H A+S
Sbjct: 196 RPRTVKEAIGNLPP---------LEAGMSHP--KDPL----------------HQCSALS 228
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E N+ R + +PG WR P E V D C ++ K + ++GR+ W+ PT
Sbjct: 229 ETNMRRIKA--SRPGGTWRDWPRELVAD----CHKKSSGK--TYPSVYGRMTWDDPAPTM 280
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV--GD--IQHIIGRL 201
T G HP QDR I++RE A Q F Y+F G+ Q IGRL
Sbjct: 281 TTQFF-GFGNGRFGHPEQDRAISLREGAILQSFPPDYEFTRPGEQVCQKSIGRL 333
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 71 FQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAE 130
+ K +G++L +H + +S+L+L + +P PG +W+ +P E V L E
Sbjct: 629 YMKIKKGEIL---NHTTFKLSDLDLEMIRSVP--PGGNWKDIPIETVKKFKR--LMRITE 681
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ L+GR+D++ T T + G GT HP DR+++VRE AR Q F D Y F
Sbjct: 682 TGGR-TTLYGRIDYDKPSYTITTYFNRPGN-GTYVHPVHDRVLSVREAARFQCFKDDYYF 739
Query: 191 VGD 193
G+
Sbjct: 740 YGN 742
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 24 STANGAPFRAITVRDTIGDLPA----------VGNGA--------SVTTMEVGFSSP--- 62
ST GA A+T D I DLP +G+ A + + V P
Sbjct: 541 STLVGATLPAVTASDAISDLPVFDWKDPHVTYLGSDAIEVQRALQGIPQLVVKQGRPTGP 600
Query: 63 ----YKSEPVLWFQKKIR---GDMLV-LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS 114
Y+S+P+ +Q+++R G+ L H + L + R + PG+++
Sbjct: 601 EETSYRSQPLNSYQERMRVLAGETACSLTQHQTPGYHALAVERVVNVALYPGANFESWSE 660
Query: 115 EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIIT 174
V ++H +++ R+D +G F +T M G+ HP Q R++T
Sbjct: 661 PGVKKPALLGTDRYTDEHFRYE----RVDSDGYFKVLMTK---MTTQGSMLHPTQRRLLT 713
Query: 175 VRECARSQGFSDSYKFVGD 193
VRECAR+QGF D F D
Sbjct: 714 VRECARAQGFPDWVHFHTD 732
>gi|116751262|ref|YP_847949.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116700326|gb|ABK19514.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 371
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 40/174 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R TV++ IG+LP + G S + +P+ H A+S
Sbjct: 196 RPRTVKEAIGNLPPLSAGTS-----------HPKDPL----------------HQCSALS 228
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E+N+ R + +PG WR P E V D C ++ K + ++GR+ W+ PT
Sbjct: 229 EINMRRIKA--SRPGGTWRDWPRELVAD----CHKKSSGK--TYPSVYGRMTWDDPAPTM 280
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV--GD--IQHIIGRL 201
T G HP QDR I++RE A Q F Y+F G+ Q IGRL
Sbjct: 281 TTQFF-GFGNGRFGHPEQDRAISLREGAILQSFPPDYEFTRPGEQVCQKSIGRL 333
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 73/192 (38%), Gaps = 64/192 (33%)
Query: 1 MHVFT--GPELKVKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG 58
+HVF +L V + + + ++G PFR IT+RDT+ DLP + NGAS +
Sbjct: 168 LHVFAPRACQLSVVVDDKKFVSNITRLSSG-PFRTITMRDTMSDLPEIQNGASAPEIS-- 224
Query: 59 FSSPYK-SEPVLWFQKKIRGDMLVLNDHISKAMSELNL----IRCQKIPKQPGSDWRVLP 113
YK VL + R + L H +++ R + IP PGSDWR LP
Sbjct: 225 ----YKWRATVLVPEAAAR---VALPAHPQGPYPQVHERAGGCRMRHIPLSPGSDWRDLP 277
Query: 114 -----------------------------------------------SEKVVDLIPWCLP 126
S + LIPWCLP
Sbjct: 278 NIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLP 337
Query: 127 NTAEKHNQWKGL 138
+T +HN W GL
Sbjct: 338 HTGNRHNHWAGL 349
>gi|167751359|ref|ZP_02423486.1| hypothetical protein EUBSIR_02345 [Eubacterium siraeum DSM 15702]
gi|167655605|gb|EDR99734.1| DNA (cytosine-5-)-methyltransferase [Eubacterium siraeum DSM 15702]
Length = 349
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 36/158 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
I VRD I DLPA+ G +V + P H S +++E+
Sbjct: 186 IHVRDFIDDLPALAAG------QVDEADPL---------------------HRSASLTEI 218
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + PG W+ P E C + E + ++GR+ WE PT T
Sbjct: 219 NLRRIRA--SVPGGTWKDWPEEL------RCKCHKKESGQTYGSVYGRMTWEQIGPTITT 270
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ G G HP QDR +++RE A Q F +Y F+
Sbjct: 271 QFYSYG-TGRYGHPEQDRALSLREGALLQTFPRNYNFI 307
>gi|313886989|ref|ZP_07820689.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923515|gb|EFR34324.1| DNA (cytosine-5-)-methyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 349
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P TV+D IG LPA+ G E+ + P H +K
Sbjct: 184 PSNYATVKDAIGALPALSAG------EIDPNDPL---------------------HRAKI 216
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S LNL R Q P G W+ P ++ + EK + ++GR+ WE P
Sbjct: 217 LSPLNLKRIQHTPY--GGGWQDWPESLRLEC------HKKEKGKSFGSVYGRMVWEKPAP 268
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T G G HP QDR I++RE A Q F SY+F + + +
Sbjct: 269 TMTTLCTGYGN-GRFGHPTQDRAISIREAALLQTFPKSYQFFSNEKDV 315
>gi|384221901|ref|YP_005613067.1| hypothetical protein BJ6T_82350 [Bradyrhizobium japonicum USDA 6]
gi|354960800|dbj|BAL13479.1| hypothetical protein BJ6T_82350 [Bradyrhizobium japonicum USDA 6]
Length = 366
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 72/174 (41%), Gaps = 40/174 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+A TVR IG LP + G V P H S +S
Sbjct: 198 KARTVRQAIGRLPRIEAGG------VHLKDPL---------------------HQSCELS 230
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
ELNL R + +PG WR E L+ C + + + G++GR+ W+ PT
Sbjct: 231 ELNLKRIR--ASKPGGTWRDWDRE----LVAAC--HRRKTGKTYPGVYGRMVWDEPAPTM 282
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGRL 201
T + G G HP+Q R I++RE A Q F YKFV Q I +GRL
Sbjct: 283 TTQYYAFGS-GRFGHPSQARGISLREGALLQSFPRDYKFVKKGQPIFRKTVGRL 335
>gi|429507219|ref|YP_007188403.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|429488809|gb|AFZ92733.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 596
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVG-----FSSPYKSEPVLWFQKKIRGDML 80
+ PF TVRD I DL + +T ME S ++ P+L + +K D
Sbjct: 401 VDSTPF---TVRDAIQDLAGI---TPLTDMEKAKPLDYIESDEQASPMLRYFRK-DADKG 453
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFG 140
++++HI+ +L+ R + I + G ++ L E + + + N ++
Sbjct: 454 LIDNHINTESRQLSKTRFEAILQSKGKNFHSLNDE-----LKTTYSDVSRTQNT---IYL 505
Query: 141 RLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
RLD++ PT V M HP + R I++RE AR Q F D++KF G
Sbjct: 506 RLDYDSPSPTVVNVRKSMWS-----HPEKARAISIREAARLQSFPDNFKFRG 552
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium
reilianum SRZ2]
Length = 768
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 33 AITVRDTIGDLP------------------------AVGNGASVTTMEVGFSS-PYKSEP 67
AITV D IGDL + A V GFS Y ++P
Sbjct: 545 AITVSDAIGDLSRFDWKDPHQVYAGPDTIELERAQRGIKQLAVVHCQANGFSKIEYATKP 604
Query: 68 VLWFQKKIR---GDML-VLNDHISKAMSELNLIRCQKIPKQPGSD---WRVLPSEKVVDL 120
+ FQ+++R G+ ++ H + + L + R + +PG+D W +K L
Sbjct: 605 LNSFQERMRVFGGEAARTVSQHQTPGFNALAVERVVNVALRPGADYDSWSEPDIDKPALL 664
Query: 121 IPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
+ +KH +++ R+D F +T P VG+ HP+Q RI +VRECAR
Sbjct: 665 GGFRFDRWQQKHFKYE----RIDGGLYFKALMTTPT---AVGSMIHPDQRRIFSVRECAR 717
Query: 181 SQGFSDSYKF 190
+QGF D +F
Sbjct: 718 AQGFPDWIEF 727
>gi|159897057|ref|YP_001543304.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890096|gb|ABX03176.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 354
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 36/161 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR+ IG LP + G W GD + H + + ++N
Sbjct: 187 TVREVIGSLPPITAGGH------------------W-----EGDSM----HAASRLEDIN 219
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R Q PG W P E LI C + E + ++GR++W+ PT T
Sbjct: 220 LRRIQH--SVPGGTWADWPEE----LIAEC--HKKESGESYGSVYGRMEWDKVAPTITTQ 271
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
+ G G HP QDR I++RE A Q F SY+F + Q
Sbjct: 272 CNGYGN-GRFGHPEQDRAISLREAALLQTFPRSYQFAPEGQ 311
>gi|312114242|ref|YP_004011838.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC
17100]
gi|311219371|gb|ADP70739.1| DNA-cytosine methyltransferase [Rhodomicrobium vannielii ATCC
17100]
Length = 363
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 40/171 (23%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV D IG+LP +G+G S ++P+ H + +S++N
Sbjct: 204 TVMDEIGELPPLGHGES-----------DDADPL----------------HCASRLSDIN 236
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R +PG WR E DL+ C + AE + ++GR+ WE PT +T
Sbjct: 237 VRRIAA--SKPGGTWR----EWGDDLVAAC--HKAETGRGYSSVYGRMKWEEPSPT-ITT 287
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGRL 201
G HP Q R +++RE A QGF Y+FV + I IGRL
Sbjct: 288 QFFGFGNGRFGHPEQARALSLREGAMLQGFPRDYEFVRPGERIQFKAIGRL 338
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV+D I DL A + + + + S Y S +QK++R L L +HI+ +
Sbjct: 190 TVKDAISDL------AYLNSADGNYESQYISNAQSEYQKQMRKGSLRLFNHIATKHNADV 243
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ + IP + G ++ L + ++ +GRL W+ PT +
Sbjct: 244 IKKLNLIPAECGKEY---------------LSEELKGKQKFNTTWGRLKWDSTSPT-IDT 287
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
GT HP +R IT RE AR Q F D + F G I ++
Sbjct: 288 RFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEICKQI 334
>gi|293417389|ref|ZP_06660013.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
gi|291430909|gb|EFF03905.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli B185]
Length = 345
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 44/176 (25%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+A+TV++ IG LP + G +++PV D L H + +S
Sbjct: 181 KAVTVKECIGGLPPLKAG--------------QTDPV---------DPL----HKASKLS 213
Query: 92 ELNL--IRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
++NL I C K PG WR P V+LI C + + + ++GR+DW+ P
Sbjct: 214 DINLKRIACSK----PGGTWRDWP----VELIASC--HIKKSGQGYASVYGRMDWDKPSP 263
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGRL 201
T T + G G HP Q+R I++RE A Q F Y F + + +GR+
Sbjct: 264 TITTLCYGFGN-GRFGHPEQNRAISLREAALLQTFPKDYVFTAPNEKVSIKNVGRM 318
>gi|83859006|ref|ZP_00952527.1| C-5 cytosine-specific DNA methylase [Oceanicaulis sp. HTCC2633]
gi|83852453|gb|EAP90306.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii
HTCC2633]
Length = 363
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 74/174 (42%), Gaps = 40/174 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R TVRD IG LP +G+G + +P+ H S +S
Sbjct: 201 RPRTVRDEIGALPPLGHGEANDV-----------DPL----------------HCSSRLS 233
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E+N+ R +PG WR DLI C + AE + ++GR+ W+ PT
Sbjct: 234 EINVRRISA--SKPGGTWRDWDD----DLIAKC--HKAETGRGYSSVYGRMKWDEPSPT- 284
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGRL 201
+T G HP Q R +++RE A QGF Y+FV + I +GRL
Sbjct: 285 ITTQFFGFGNGRFGHPEQPRALSLREGAMLQGFPRDYEFVPPGERIQFKAVGRL 338
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV+D I DL A + + + + S Y S +QK++R L L +HI+ +
Sbjct: 189 TVKDAISDL------AYLNSADGNYESQYISNAQSEYQKQMRKGSLRLFNHIATKHNADV 242
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ + IP + G ++ L + ++ +GRL W+ PT +
Sbjct: 243 IKKLNLIPAECGKEY---------------LSEELKGKQKFNTTWGRLKWDSTSPT-IDT 286
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
GT HP +R IT RE AR Q F D + F G I ++
Sbjct: 287 RFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEICKQI 333
>gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|406703438|ref|YP_006753792.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|406360468|emb|CBY66741.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
Length = 389
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+T+ D IGDLPA+ NG Y +P +Q +R + +L DH + E
Sbjct: 211 LTLEDAIGDLPALRNGER--------KDAYDGDPYTPYQNLMRNNSTILMDHFNGLNGE- 261
Query: 94 NLIRCQK--IPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
++R + IP + L +D + T+ +N + L W ++
Sbjct: 262 KMLRIMETVIPGEGKKYINELVESGQLDSKYYL---TSGYNNTYSKL-----WWDRPSST 313
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+T+ C HP Q+R +T RE AR Q F D+++FVG + I
Sbjct: 314 ITNNLSTPSSFRCIHPIQNRALTPREGARIQSFPDTFQFVGSKEKI 359
>gi|149190497|ref|ZP_01868767.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
gi|148835621|gb|EDL52588.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
Length = 349
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + MSELNL R + +PG W+ P E L+ C ++ + + ++GR+ W
Sbjct: 210 HRAANMSELNLKRIK--ASKPGGTWQDWPEE----LVAACHKKSS--GSSYSAVYGRMSW 261
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ T T G G HP QDR IT+RE A Q F D Y+F
Sbjct: 262 DKVGATMTTQCIGFGN-GRFGHPEQDRAITLREAAILQTFPDDYEF 306
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K + RL+W N
Sbjct: 238 HSKAALEKLKLINKEQGKE---------------CLPKNLHGEQQFKSTWRRLNW-NNIS 281
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEMLFHLLW 209
++ + GT H R IT R AR Q FSD+Y G+I + ++ L+
Sbjct: 282 HTIDTRYDTPSNGTNSHREMHRSITPRGAARIQSFSDNYMSYGNITSVCKQIGNAVPLVL 341
Query: 210 RLHWGE 215
L G+
Sbjct: 342 ALALGQ 347
>gi|282859820|ref|ZP_06268914.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|424900799|ref|ZP_18324341.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
gi|282587440|gb|EFB92651.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|388592999|gb|EIM33238.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
Length = 356
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 37/164 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRDTIG+L A+ +G E+ P H ++ +S+L
Sbjct: 190 VTVRDTIGNLRAIKDG------EIDSHDPL---------------------HRARKLSDL 222
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + K+ GS W P E +++ C + K + ++GR+ W PT T
Sbjct: 223 NLKRVS-LTKEGGS-WHDWPEEMILE----CFKRQSGK--SYGSVYGRMKWNEPAPTMTT 274
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+G G HP Q+R I++RE A Q F YKF DI I
Sbjct: 275 QCTGLGN-GRFGHPEQNRAISLREAALFQTFPIDYKFY-DINEI 316
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 96/245 (39%), Gaps = 61/245 (24%)
Query: 10 KVKLARNSHYAAVRSTANG-----------------APFRAITVRDTIGDLPA------- 45
+ + R H A R NG APF A+T+++ I DLPA
Sbjct: 825 QTHIPRQGHKAVQRRITNGFLAPLASRNESGEKHEQAPFYAVTIKEAIDDLPAWDWENPG 884
Query: 46 --VGNGA-----------------SVTTMEV----GFSSP--YKSEPVLWFQ---KKIRG 77
+GA + T + G++ P Y S P +Q +K +G
Sbjct: 885 IVYPDGARKQDSNKPTFPATVDQRKLDTEDAQAVSGYNYPVRYASAPRTLYQAFCRKGQG 944
Query: 78 DMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG 137
+ + H + L + R +P +P +++ LP L AE K
Sbjct: 945 HLARVEAHCTILYPSLVVERTVNVPIKPLANFNDLPKS----LKGEKAKGDAESK---KD 997
Query: 138 LFGRLDWEGNFPTSVTDPHPMGMVGTC-FHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
+ RLD F T +T +P G G C HP R+++ RE AR+QGF D Y+F +
Sbjct: 998 TYWRLDENEQFRTLMTSYNP-GSKGACVIHPTDKRVLSARELARAQGFPDDYEFCPAEER 1056
Query: 197 IIGRL 201
I ++
Sbjct: 1057 IAVKM 1061
>gi|448564291|ref|ZP_21635972.1| DNA-cytosine methyltransferase [Haloferax prahovense DSM 18310]
gi|445716842|gb|ELZ68572.1| DNA-cytosine methyltransferase [Haloferax prahovense DSM 18310]
Length = 350
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P TVR+ IGDLP + G Y E L H S+
Sbjct: 183 PVNYPTVREVIGDLPPIEAGE------------YLDEDHL---------------HKSRT 215
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ E NL R + PG WR + +D + E + ++GR++W+ P
Sbjct: 216 LEEQNLERIGQ--SLPGGTWRDWDPDIRLDC------HRKESGRSFDSVYGRMEWDAPAP 267
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV---GDIQ 195
T T + G G HP QDR I++RE A Q F + Y FV GD++
Sbjct: 268 TMTTQYYNYGS-GRFGHPEQDRAISLREGAMLQTFPEDYDFVEEGGDVE 315
>gi|297570127|ref|YP_003691471.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296926042|gb|ADH86852.1| DNA-cytosine methyltransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 363
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 36/159 (22%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
A+TVRD I +S++ + G S P ++P+ H + ++SE
Sbjct: 197 AVTVRDAI---------SSLSRLNAGESDP--NDPL----------------HTAASLSE 229
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+NL R + PG WR P E L C K + G++ R+ WE PT
Sbjct: 230 INLRRIRA--SVPGGTWRDWPEE----LRAPCHQRVTGK--TYPGVYARMTWEEPAPTMT 281
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T + G G HP QDR I++RE A Q F Y+F+
Sbjct: 282 TQCYGYGN-GRFGHPEQDRAISLREAAILQSFPAEYEFL 319
>gi|167621147|ref|ZP_02389778.1| site-specific DNA-methyltransferase [Burkholderia thailandensis
Bt4]
Length = 355
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR+TIG LP + G E+ H + ++S LN
Sbjct: 195 TVRETIGALPPIKAGERDPKDEL---------------------------HAAPSLSALN 227
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R + +PG WR P E L+ C + + + ++GR++W+ PT T
Sbjct: 228 MSRIRA--SRPGGTWRDWPDE----LLASC--HRKDTGATYPSVYGRMEWDEPAPTITTQ 279
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G G HP QDR I++RE A Q F SY F
Sbjct: 280 CFGYGN-GRFGHPEQDRAISLREAAMLQTFPKSYAFT 315
>gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 58/215 (26%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWF---------QKKIRGD 78
G P RA+TVRD IG+LP + G T + P W Q+ G
Sbjct: 1078 GTPLRAVTVRDAIGNLPPITPG---TKDDPAVPLPRPMSAFQWRLAEAATAGRQRSADGS 1134
Query: 79 ------------MLVLNDHIS-KAMSELNLIRCQKIPKQPGSDWRVLPS----------- 114
VL DH++ + +SE + +P PG D ++
Sbjct: 1135 EHADGGVGGGAPPPVLADHVTPRVLSEFHAKAASLVP--PGMDIFLVADKLKGPGDMTAA 1192
Query: 115 -------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMV 161
E+ ++ PN E N+ G++GRL F T+ T +G+
Sbjct: 1193 AAQQLSAATGQTPEQYLERWQVVEPNLPE--NRRSGMYGRLCHTSYFRTATTK---VGVD 1247
Query: 162 GTCFHPN--QDRIITVRECARSQGFSDSYKFVGDI 194
G HP+ Q R ++VRE ARSQGF D ++F G +
Sbjct: 1248 GWSLHPDLDQQRTVSVREVARSQGFPDQHRFKGSV 1282
>gi|332288285|ref|YP_004419137.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis UMN179]
gi|330431181|gb|AEC16240.1| C-5 cytosine-specific DNA methylase [Gallibacterium anatis UMN179]
Length = 349
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P R +TV+D I LP + G + T D L H + A
Sbjct: 180 PERWVTVQDVISHLPKIEAGQTCPT-----------------------DRL----HRAMA 212
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+SE+NL R Q + G WR P E L C + + ++GR+ W P
Sbjct: 213 LSEINLKRIQ--ASKQGGTWRDWPEE----LRTAC--HRKASGATYSAVYGRMSWNKPSP 264
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T T + G G HP QDR I++RE A Q F ++Y+F + I
Sbjct: 265 TMTTLCYGYGN-GRFGHPEQDRAISLREAAILQAFPENYQFCPQDKQI 311
>gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 58/215 (26%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWF---------QKKIRGD 78
G P RA+TVRD IG+LP + G T + P W Q+ G
Sbjct: 1078 GTPLRAVTVRDAIGNLPPITPG---TKDDPAVPLPRPMSAFQWRLAEAATAGRQRSADGS 1134
Query: 79 ------------MLVLNDHIS-KAMSELNLIRCQKIPKQPGSDWRVLPS----------- 114
VL DH++ + +SE + +P PG D ++
Sbjct: 1135 EHADGGVGGGAPPPVLADHVTPRVLSEFHAKAASLVP--PGMDIFLVADKLKGPGDMTAA 1192
Query: 115 -------------EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMV 161
E+ ++ PN E N+ G++GRL F T+ T +G+
Sbjct: 1193 AAQQLSAATGQTPEQYLERWQVVEPNLPE--NRRSGMYGRLCHTSYFRTATTK---VGVD 1247
Query: 162 GTCFHPN--QDRIITVRECARSQGFSDSYKFVGDI 194
G HP+ Q R ++VRE ARSQGF D ++F G +
Sbjct: 1248 GWSLHPDLDQQRTVSVREVARSQGFPDQHRFKGSV 1282
>gi|342210471|ref|ZP_08703237.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
gi|341579492|gb|EGS29506.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
Length = 600
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV + I DL + +G S Y +EPV ++QK +R + L L +H + S+
Sbjct: 193 TVYEAISDLSYLNSGEGEEI------SDYINEPVSYYQKLMRKNSLKLYNHKATNHSKHA 246
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + IP + G ++ LP ++K + RL+W PT +
Sbjct: 247 LYKLSLIPPEKGKEF---------------LPKELLGKQKFKTTWTRLEWNEPSPT-IDT 290
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R IT RE AR Q F D + F G
Sbjct: 291 RFDTPSNGKNTHPILNRAITPREAARLQSFPDDFIFTG 328
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML-VLND 84
AP R +T+RD I DL ++ S ++ SEP+ +Q+ ++GD + D
Sbjct: 218 CTSAPLRTVTLRDAISDLASLEPSDSASSF---------SEPMSCYQRMLKGDSRGPIRD 268
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV 118
H+ K ++ L R IPK P ++WR LP+ K++
Sbjct: 269 HVPKLLTPLVQARVDHIPKVPRANWRSLPNIKLL 302
>gi|350271400|ref|YP_004882708.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348596242|dbj|BAL00203.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 360
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ELN+ R Q +P GS P DL+ C + N ++ ++GR+ W
Sbjct: 226 HTCSRVGELNMRRIQAVPHNGGSRSSFPP-----DLVLKC---HQDYPNGFRDVYGRMHW 277
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+ PT +T G HPNQDR I++ E A+ Q F D+Y F G+
Sbjct: 278 DQPSPT-ITGGCTNITRGRFIHPNQDRGISLYEAAKLQTFPDNYIFSGN 325
>gi|127441|sp|P25265.1|MTD2_HERAU RecName: Full=Modification methylase HgiDII; Short=M.HgiDII;
AltName: Full=Cytosine-specific methyltransferase HgiDII
gi|48773|emb|CAA38941.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 354
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + + ++NL R Q PG W P E LI C + E + ++GR++W
Sbjct: 210 HAASRLEDINLRRIQH--SVPGGTWADWPEE----LIAEC--HKKESGESYGSVYGRMEW 261
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
+ PT T + G G HP QDR I++RE A Q F SY+F + Q
Sbjct: 262 DKVAPTITTQCNGYGN-GRFGHPEQDRAISLREAALLQTFPRSYQFAPEGQ 311
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R + L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKNSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K + RL+W N
Sbjct: 238 HSQAALEKLKLINKEQGKE---------------CLPKNLHGEQQFKSTWRRLNW-NNIS 281
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
++ + GT H R IT R AR Q FSD+Y G+I + ++
Sbjct: 282 HTIDTRYDTPSNGTNSHREMHRSITPRGAARIQSFSDNYMSYGNITSVCKQI 333
>gi|381208073|ref|ZP_09915144.1| site-specific DNA-methyltransferase [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 408
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 11 VKLARNSHYAAVRSTANGAPFRAITVRDTIGDLPAVG-NGASVTTMEVGFSSPYKSEPVL 69
+ L RN YA + N A F + R+ + + G NG + S E
Sbjct: 165 LSLLRNEGYACSFNLYNAANFGSPQKRERV--IIVCGRNGKKPPHLMPTHSEDGSFELPK 222
Query: 70 W--FQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPN 127
W FQ ++G + HI+ L R K PG WR LP ++L +
Sbjct: 223 WRTFQDAVKGLPKDGHSHINFPEKRLRYYRLLK----PGQYWRNLP----LELQKEAMGG 274
Query: 128 TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
+ G F RL W+ PT VT HP HP +DR ++V+E R Q F D
Sbjct: 275 SYGSGGGKTGFFRRLAWDKPSPTLVT--HPAMPATDLAHPEEDRPLSVQEYKRIQEFPDE 332
Query: 188 YKFVGDI 194
+K G+I
Sbjct: 333 WKITGNI 339
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 40/172 (23%)
Query: 29 APFRAITVRDTIGDLPAVG-------------NGASVTTMEV------------------ 57
+PFRA+T+ D IGDLP + T E
Sbjct: 1059 SPFRAVTINDAIGDLPGFDWINPHLVYPSTSRDKTEKRTRETEHGILAFDAGYEDRRSQK 1118
Query: 58 --GFSSP--YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP 113
G+S P Y +P+ +QK IRG + ++ + + R +P +P +D+ LP
Sbjct: 1119 YPGYSKPMSYAHQPMTRYQKWIRGSQKKVKYQYTRRFGDGIIERVINVPLKPNADYHSLP 1178
Query: 114 SEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
+ + + + +++GL+GRLD E F T++T P T F
Sbjct: 1179 KKLHMKMF-----DKKGAKERFRGLYGRLDGESQFKTALTTVAPNAKGVTYF 1225
>gi|389579126|ref|ZP_10169153.1| DNA-methyltransferase Dcm [Desulfobacter postgatei 2ac9]
gi|389400761|gb|EIM62983.1| DNA-methyltransferase Dcm [Desulfobacter postgatei 2ac9]
Length = 420
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDLP P +E IR L+ H + +EL+
Sbjct: 243 TVRDAIGDLP----------------KPEGTE--------IRNIQPPLDLHFGRNPTELS 278
Query: 95 LIRCQKIPKQPGSDW---RVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
R + IPK+ + + R+ P +L P C K + LFGRL W+ T
Sbjct: 279 RKRYRAIPKEGMNRFDLQRIAP-----ELTPKCW---IRKKSGGTDLFGRLWWDRPSVTI 330
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T+ + G HP+Q R IT RE AR Q F DS+KF+G
Sbjct: 331 RTEFY-KPEKGRYLHPDQHRPITHREAARFQSFPDSFKFLG 370
>gi|422822980|ref|ZP_16871168.1| modification methylase HgiDII [Streptococcus sanguinis SK405]
gi|422826940|ref|ZP_16875119.1| modification methylase HgiDII [Streptococcus sanguinis SK678]
gi|422854922|ref|ZP_16901580.1| modification methylase HgiDII [Streptococcus sanguinis SK1]
gi|324993630|gb|EGC25549.1| modification methylase HgiDII [Streptococcus sanguinis SK405]
gi|324995058|gb|EGC26971.1| modification methylase HgiDII [Streptococcus sanguinis SK678]
gi|327462899|gb|EGF09220.1| modification methylase HgiDII [Streptococcus sanguinis SK1]
Length = 352
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+RD I +LP + G + Y +P+ H S+ MS LN
Sbjct: 189 TLRDAIENLPKIKAGET-----------YAKDPL----------------HRSRNMSTLN 221
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R Q+ +PG WR + +++ E + ++GRL+W+ ++T
Sbjct: 222 LKRIQQ--SKPGGTWRDWDEDLLLEAY------KKESGQSFGSVYGRLEWDKP-ANTITT 272
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
P G HP QDR +++RE A Q F +Y+FV
Sbjct: 273 QFPGIGNGRFGHPEQDRALSLREGALLQTFPSNYQFV 309
>gi|167560986|ref|ZP_02353902.1| site-specific DNA-methyltransferase [Burkholderia oklahomensis
EO147]
Length = 355
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++S LN+ R + +PG WR P E L+ C + + + ++GR++W
Sbjct: 218 HAAPSLSALNMSRIRA--SRPGGTWRDWPDE----LLASC--HRKDTGATYPSVYGRMEW 269
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR I++RE A Q F SY F
Sbjct: 270 DQPAPTITTQCFGYGN-GRFGHPEQDRAISLREAAMLQTFPKSYAFT 315
>gi|443318015|ref|ZP_21047309.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
gi|442782384|gb|ELR92430.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
Length = 419
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD------LIPWCLPNTAEKHNQWKGL 138
H+S M+ + L R Q IPK GS ++ + K+ D LIP + + +
Sbjct: 256 HVSPGMTSVVLSRIQAIPKDGGSWGDIMKNPKISDEEKKKLLIPSMF---RARPGSFPDV 312
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+GRL W T + +G G HP QDR++TVRE A QGF Y F G +
Sbjct: 313 YGRLKWHDVAATITRECGHVGN-GRYAHPEQDRLLTVREMAILQGFPTHYFFEGAL 367
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 115 EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH-----PMGMVGTCFHPNQ 169
+ + DL C +T N G F RL W+ PT +T P P HP Q
Sbjct: 1032 DAISDLPHVCFISTRSICNS--GPFARLWWDETVPTVLTVPTCHSQVPSKPFQALLHPEQ 1089
Query: 170 DRIITVRECARSQGFSDSYKFVGDIQH 196
DR++T+RE AR QGF D ++F G I+
Sbjct: 1090 DRVLTIRESARLQGFPDYFQFCGTIKE 1116
>gi|432463292|ref|ZP_19705421.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE204]
gi|433070291|ref|ZP_20257049.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE128]
gi|430984997|gb|ELD01607.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE204]
gi|431578081|gb|ELI50696.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE128]
Length = 352
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H+++ MS+LNL R ++ +PG W+ E L+ C ++ K + ++GR+ W
Sbjct: 210 HVAQGMSQLNLERIRQ--SKPGGTWKDWDPE----LVAACHKKSSGK--TYTSVYGRMRW 261
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ PT T G G HP QDR I++RE A Q F ++Y F
Sbjct: 262 DEPAPTMTTLCFGFGN-GRFGHPQQDRAISLREAAIFQSFPENYVF 306
>gi|403745373|ref|ZP_10954292.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121438|gb|EJY55740.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 380
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 36/160 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R +TVR+ IG+LP + G EV P H ++S
Sbjct: 214 RTVTVREAIGNLPPLKAG------EVSDIDPL---------------------HQCSSLS 246
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ NL R Q +PG WR E + D + E + ++GR++W+ PT
Sbjct: 247 QTNLRRIQA--SKPGGSWRDWDEELIADC------HKKETGTTYPSVYGRMEWDEPAPT- 297
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+T G HP Q+R +++RE A Q F Y+FV
Sbjct: 298 ITTQFFGFGNGRFGHPEQNRALSLREGAILQSFPRDYQFV 337
>gi|428320197|ref|YP_007118079.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428243877|gb|AFZ09663.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 391
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LPSE L + + G + RL WE PT T PH C
Sbjct: 264 GQNWRDLPSE----LKQEAMGGAYKSEGGKVGFYRRLAWEKPSPTVTTSPH-QKATDMC- 317
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVG 192
HP++ R ++VRECAR Q F D + F G
Sbjct: 318 HPDELRPLSVRECARIQTFPDDWVFYG 344
>gi|336402811|ref|ZP_08583538.1| hypothetical protein HMPREF0127_00851 [Bacteroides sp. 1_1_30]
gi|335947692|gb|EGN09476.1| hypothetical protein HMPREF0127_00851 [Bacteroides sp. 1_1_30]
Length = 355
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 36/163 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR TIG LP + G E+ S P H ++A+SELN
Sbjct: 193 TVRQTIGKLPPIKAG------EICPSDPL---------------------HRARALSELN 225
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + P + W+ ++D + + + ++GR++W+ PT T
Sbjct: 226 LRRIESTPIK--GSWKDWDESLILDC------HKKDSGKSFGSVYGRMNWDEPAPTMTTL 277
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+G G HP Q+R I++RE A Q F SYKF + I
Sbjct: 278 CTGLGN-GRFGHPEQNRAISLREAAMFQTFPKSYKFFSPKEEI 319
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 46/197 (23%)
Query: 38 DTIGDLPAVGNGASVTTMEVGFS--SPYK-------------SEPVLWFQKKIRGDMLVL 82
D + DLP + N + + +PY+ E VL + + L
Sbjct: 156 DVLSDLPEISNYTTAEAAQYASDPKTPYQMWLRRQPPAVHMFDEQVLKEAEHAEKAVGPL 215
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPS-----------------EKVVDLIP--- 122
DH S ++ + +RC +P + +++R +P +P
Sbjct: 216 RDHRSLCLNFDDHLRCCSVPSKKDANFREMPGVITHGDGAVCGVVGAGCPGTTVFLPTGD 275
Query: 123 -----WCLPNTAEKHNQWKGLFGRLDWEGNFPTSV--TDPHPMGMVGTCFHPNQDRIITV 175
WC+ K G FGR+ ++ PT V +PH + ++ HP Q R++++
Sbjct: 276 LLCPRWCVTYKQGKSGGRHGCFGRMWYDEIQPTVVGRAEPHNLRLI----HPTQGRVVSI 331
Query: 176 RECARSQGFSDSYKFVG 192
RE AR QGF D + G
Sbjct: 332 RENARCQGFPDYFALAG 348
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--GDMLVLNDHISKA 89
A T+ D IGDLP + G Y P +Q +R + L L+ +
Sbjct: 171 EARTIMDAIGDLPKLEAGEEAIE--------YTEPPQNRYQAALRQGSERLTLHKATNHG 222
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ + +IR P + + + S++V D+ + + + RLD + P
Sbjct: 223 DNMMTIIRNSG-PNKQTTIENLKESDEVDDVENYI-------KTGYSSSYSRLD--ADLP 272
Query: 150 T---SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ +V HP C HPNQDR +T RE AR Q F D+++F G I+ ++
Sbjct: 273 SVTMTVNFIHPAS--NKCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQI 325
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P IT R + DLP++ N + E Y EP +Q+ +RG+ VL++H+
Sbjct: 184 PENYITCRAAVSDLPSLQNDLGMEEAE------YIREPQTEYQRLMRGNCTVLHNHLGTN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+++ +P+ G +++ LP W + + H W L GN P
Sbjct: 238 HTQMVKDTIALVPE--GGNYKDLPE-------GWG--ESRKFHMAWTRL------NGNAP 280
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
D + FH +R+ TVRE AR Q F D + F+G
Sbjct: 281 ARTVDTGHRNL----FHYEYNRVPTVRESARMQSFPDDFVFLG 319
>gi|388543421|ref|ZP_10146712.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
gi|388278733|gb|EIK98304.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
Length = 360
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H S ++S++NL R I PG WR P L C ++ + + + ++GR++W
Sbjct: 212 HYSASLSQINLQRI--IRSSPGGTWRDWPEH----LRAPC--HSKKSGSTYASVYGRMEW 263
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ PT T + G G HP Q+R +++RE A Q F D Y F
Sbjct: 264 DKPSPTITTQSYGYGN-GRFGHPEQNRALSLREAAILQSFPDDYSF 308
>gi|335039076|ref|ZP_08532262.1| DNA-cytosine methyltransferase [Caldalkalibacillus thermarum
TA2.A1]
gi|334181044|gb|EGL83623.1| DNA-cytosine methyltransferase [Caldalkalibacillus thermarum
TA2.A1]
Length = 367
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP E +IP + + G + RLD++ PT VT P +
Sbjct: 226 GGNWRNLPPE----VIPEAMGGAYKSSGGKVGFYRRLDYDQPSPTLVTSP--IQKATMLC 279
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP QDR ++VRE AR Q F D +K G +
Sbjct: 280 HPTQDRPLSVREYARIQQFPDDWKIEGKL 308
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR--GDMLVLNDHISKA 89
A T+ D IGDLP + G Y P +Q +R + L L+ +
Sbjct: 219 EARTIMDAIGDLPKLEAGEEAIE--------YTEPPQNRYQAALRQGSERLTLHKATNHG 270
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ + +IR P + + + S++V D+ + + + RLD + P
Sbjct: 271 DNMMTIIRNSG-PNKQTTIENLKESDEVDDVENYI-------KTGYSSSYSRLD--ADLP 320
Query: 150 T---SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ +V HP C HPNQDR +T RE AR Q F D+++F G I+ ++
Sbjct: 321 SVTMTVNFIHPAS--NKCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQI 373
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 64/164 (39%), Gaps = 26/164 (15%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P + V D IGDLP VG G +T Y P Q +RGD L H +
Sbjct: 190 PVKTPGVIDGIGDLPEVGPGEEITE--------YDQSPQTVLQNDLRGDSDELTAHQAAR 241
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ IP G + +P E L ++ HN + L + + P
Sbjct: 242 HDADMVEMISHIPD--GGNRTAIPDE---------LQPSSGYHNSYSRL------KSDEP 284
Query: 150 T-SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
++T C HP Q R +T RE AR Q F DSY+F G
Sbjct: 285 AVAITRNMSKPSSARCIHPFQHRGLTPREGARLQTFPDSYRFEG 328
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 69/168 (41%), Gaps = 38/168 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV D I DLPA+ G S Y VL +H + +SE+N
Sbjct: 212 TVYDAIADLPAITAGES-----------YAGNNVL--------------NHRAAMLSEIN 246
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEK---HNQWKGLFGRLDWE--GNFP 149
L R K G P L P C T E H+ +GRL W+
Sbjct: 247 LERI-KASTHDGGGRNNWPRA----LWPECYTRTNEDGTTHSGHTDCYGRLWWKKPATGL 301
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T+ + G G HP QDR I+VRE AR QGF D+++F G++ +
Sbjct: 302 TTRCISYSNGRFG---HPVQDRAISVREAARLQGFDDTFEFTGNLNSM 346
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPN--QDRIITVRECARSQG 183
P+ E+ + G +GRL G F T++T P G HP+ Q R ++VRE ARSQG
Sbjct: 1142 PHLVERSTR-SGFYGRLSHSGYFRTAITTPRVESSTGWSLHPDTAQQRSVSVRELARSQG 1200
Query: 184 FSDSYKFVG 192
F D + F G
Sbjct: 1201 FPDRHTFGG 1209
>gi|307103701|gb|EFN51959.1| hypothetical protein CHLNCDRAFT_139634 [Chlorella variabilis]
Length = 1149
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 101 IPKQPGSDWRVLPSEKVVDLIP--WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH-P 157
+P++ G DWR LP+ + D + +P+ G FGRL W +F T +T P
Sbjct: 1020 LPRRAG-DWRDLPACLIPDRLRGRQLVPSNV-------GQFGRLLWLSHFGTCLTSPKLN 1071
Query: 158 MGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T HP+ DR +TVRE AR QG D+ F G I
Sbjct: 1072 SKTTSTTVHPSADRPLTVREAARVQGVPDAVTFHGTI 1108
>gi|345512890|ref|ZP_08792414.1| C-5 cytosine-specific DNA methylase [Bacteroides dorei 5_1_36/D4]
gi|229435031|gb|EEO45108.1| C-5 cytosine-specific DNA methylase [Bacteroides dorei 5_1_36/D4]
Length = 356
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 36/164 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD I +LP ++ G P D L H +A+S L
Sbjct: 196 VTVRDVISNLPP---------LQAGEECP--------------ADKL----HRCRALSAL 228
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N+ R + P G W+ P E +++ + E + ++GR+ WE PT T
Sbjct: 229 NMRRMEATPY--GGSWKDWPEELLLNC------HKKEGGKSFGSVYGRMTWEEPAPTMTT 280
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+G G HP Q+R I+ RE A Q F +YKF + Q +
Sbjct: 281 LCTGIGN-GRFGHPIQNRAISAREAALFQTFPTTYKFFPNEQEV 323
>gi|323350984|ref|ZP_08086641.1| modification methylase HgiDII [Streptococcus sanguinis VMC66]
gi|322122708|gb|EFX94417.1| modification methylase HgiDII [Streptococcus sanguinis VMC66]
Length = 352
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
+P T+RDTIG+LP + G + Y +P+ H S+
Sbjct: 183 SPNNYPTLRDTIGNLPEIRAGET-----------YVQDPL----------------HRSR 215
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
+S LNL R ++ +PG WR + +++ E + ++GRL+W+
Sbjct: 216 NLSALNLKRIRQ--SKPGGTWRDWDKDLLLEAY------KKESGKSFGSVYGRLEWDKP- 266
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
++T P G HP QDR +++RE A Q F +Y+FV
Sbjct: 267 ANTITTQFPGIGNGRFGHPEQDRALSLREGALLQTFPLNYEFV 309
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVV--DLIPW--------------C 124
VL DH ++ + R ++PK+ G+ +R P +V + + W
Sbjct: 786 VLYDHRPLQLNPDDYARVCEVPKRKGACFRDFPGVRVRGDNKVEWDPEVPRVYLASGKPL 845
Query: 125 LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+P+ A + F RL W+ PT VT P HP QDR++T+RE AR Q
Sbjct: 846 VPDYAMSFVKGSSSKPFARLWWDETVPTVVTRAEPHNQA--IMHPEQDRVLTIRENARLQ 903
Query: 183 GFSDSYKFVGDIQH 196
GF D Y+ G ++
Sbjct: 904 GFPDFYRLSGPVKE 917
>gi|422304272|ref|ZP_16391619.1| Modification methylase HgiDII [Microcystis aeruginosa PCC 9806]
gi|389790640|emb|CCI13496.1| Modification methylase HgiDII [Microcystis aeruginosa PCC 9806]
Length = 348
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC-LPNTAEKHNQWKGLFGRLD 143
H +SELNL R + +PG W P E LI C L N+ + + ++GR++
Sbjct: 210 HQCSNLSELNLRRIRV--SKPGGTWSDWPEE----LIASCHLKNSGKT---YPSVYGRME 260
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IG 199
W+ PT T G G HP QDR I++RE A Q F +Y+F+ + + IG
Sbjct: 261 WDQPSPTITTQFFGYGN-GRFGHPEQDRAISLREAALLQTFPQNYQFLSPDEPVVFDRIG 319
Query: 200 RL 201
RL
Sbjct: 320 RL 321
>gi|78189586|ref|YP_379924.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii
CaD3]
gi|78171785|gb|ABB28881.1| C-5 cytosine-specific DNA methylase [Chlorobium chlorochromatii
CaD3]
Length = 359
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P ITV+D IG+L A+ +G + ND I KA
Sbjct: 188 PDNYITVKDAIGNLEAIKSGETSQ-----------------------------NDFIHKA 218
Query: 90 --MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGN 147
+SE+NL R ++ PG W+ K D + +T EK + ++GR+ W
Sbjct: 219 AQLSEINLSRIKQ--SIPGGSWK-----KDWDDELKLVCHTKEKGKTYVSVYGRMMWNEP 271
Query: 148 FPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
PT T +G G HP Q+R I++RE A Q F YKF
Sbjct: 272 SPTMTTFCTGIGN-GRFGHPEQNRAISLREAAILQSFPADYKFA 314
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + + E F S Y + +Q +R D L +H +
Sbjct: 184 PSQSVNVQDAISDL------AYLCSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I ++ G + CLP Q+K +GRL+ P
Sbjct: 238 HSQAALEKLKLINQEQGKE---------------CLPKNLHGKQQFKSTWGRLNGNKVSP 282
Query: 150 TSVTD-PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T T P + HP R IT R+ AR Q +SD+Y F G+
Sbjct: 283 TIDTRLDTPSNATNS--HPELHRSITPRKAARIQSYSDNYIFYGN 325
>gi|113478056|ref|YP_724117.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169104|gb|ABG53644.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 345
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S LNL R + +PG WR P +LI C +T + ++GR++W
Sbjct: 209 HQCSKLSALNLRRIRA--SKPGGTWRDWPK----NLIAKC--HTKSSGKSYPSVYGRMEW 260
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ PT T G G HP QDR I++RE A Q F Y+F
Sbjct: 261 DSPSPTITTQCFGFGN-GRFGHPEQDRAISLREAALLQTFPHKYQF 305
>gi|417937475|ref|ZP_12580775.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343391739|gb|EGV04312.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 364
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 30/172 (17%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
F +TVRD I +L + T + +P P+ +QK + + +++H
Sbjct: 200 FNTVTVRDAISNL-------GLETSDGIVDNPL---PLTDYQKFLSSNSEKIHNHTKTNH 249
Query: 91 SELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
S + + R KI + G +++VL EK+ + G +GRL WE PT
Sbjct: 250 SPIAIERMSKI--RSGENFKVL-DEKIKSI--------------HSGSYGRLSWEDLAPT 292
Query: 151 SVTD-PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T P G G HP +R +T RE AR Q F D Y F G II ++
Sbjct: 293 ITTRFDTPSG--GRFIHPIYNRTLTPREAARIQSFPDDYIFYGKKSSIIKQI 342
>gi|414595012|ref|ZP_11444644.1| putative DNA-cytosine methyltransferase [Escherichia blattae NBRC
105725]
gi|403194119|dbj|GAB82296.1| putative DNA-cytosine methyltransferase [Escherichia blattae NBRC
105725]
Length = 358
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPW-CLPNTAEKHNQWKGLFGRLD 143
H ++ S LN+ R ++IPK G E + D + C + K + + +GR+
Sbjct: 214 HFARRHSTLNIQRLEQIPKNGGG------RESLPDYLQLNC--HKKSKGSSFSDTYGRMR 265
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
W+ PT T + G HP Q+R IT+RE AR Q F D Y F G+ I ++
Sbjct: 266 WDDVAPTLTTGCTDITK-GRFAHPEQNRSITLREAARLQSFPDEYIFHGNSAQIATQI 322
>gi|190410730|ref|YP_001966068.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
gi|133753293|gb|ABO38149.1| M.TspMI [Thermus sp. manalii]
gi|148608604|gb|ABQ95624.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
Length = 437
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 97 RCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAE-KHNQWKGLFGRLDWEGNFPTSVTD- 154
R + +P+ GS W L S LIP E K + ++GR+ W PT +
Sbjct: 274 RIKAVPRDGGS-WIDLASRNPELLIPSMKRKLREGKKGSFPDVYGRMSWNSPAPTITREC 332
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
HP G HP QDR++++RE A QGF +Y F+G++ ++
Sbjct: 333 GHPGN--GRYLHPEQDRMLSIREMAILQGFPPNYTFIGNLNQCYNQI 377
>gi|343520342|ref|ZP_08757311.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
gi|343397300|gb|EGV09834.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
Length = 599
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
++ I+VR+ I DL + +G E + YK+ +QK +R +L +HI+
Sbjct: 190 YKKISVREAISDLAFLESG------EGNNLAVYKNFAESDYQKTLRNPEGILYNHIATNH 243
Query: 91 SELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
S+ +L + IP P D LP E + ++K + RL+W+ P
Sbjct: 244 SKNSLKKLSMIP--PEGDKSSLPIE-------------LHGNQKFKTTWSRLEWDKPSP- 287
Query: 151 SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
++ G HP +R IT RE AR Q F DSY F G
Sbjct: 288 AIDTRFDTPSNGKNSHPYLNRAITPREAARLQSFPDSYYFCG 329
>gi|387889386|ref|YP_006319684.1| putative site-specific DNA methylase [Escherichia blattae DSM 4481]
gi|386924219|gb|AFJ47173.1| putative site-specific DNA methylase [Escherichia blattae DSM 4481]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPW-CLPNTAEKHNQWKGLFGRLD 143
H ++ S LN+ R ++IPK G E + D + C + K + + +GR+
Sbjct: 213 HFARRHSTLNIQRLEQIPKNGGG------RESLPDYLQLNC--HKKSKGSSFSDTYGRMR 264
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
W+ PT T + G HP Q+R IT+RE AR Q F D Y F G+ I ++
Sbjct: 265 WDDVAPTLTTGCTDITK-GRFAHPEQNRSITLREAARLQSFPDEYIFHGNSAQIATQI 321
>gi|206579328|ref|YP_002239202.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
gi|206568386|gb|ACI10162.1| DNA-cytosine methyltransferase [Klebsiella pneumoniae 342]
Length = 347
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 63/160 (39%), Gaps = 36/160 (22%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R TV+D IG LP V G + T D L H S +
Sbjct: 182 RKTTVKDAIGMLPKVEAGQKLAT-----------------------DAL----HCSPKLR 214
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
ELNL R + PG W P E + + + +K ++GR+ W+ PT
Sbjct: 215 ELNLKRI--MHSLPGGTWDDWPEEIRAEC------HKKDSGMTYKSVYGRMIWDDTSPTI 266
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T + G G HP Q+R IT+RE A Q F Y F+
Sbjct: 267 TTQCYGYGN-GRFGHPEQNRAITLREAAILQSFPLEYNFL 305
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
++TVRD I DL A + + + + S Y + +QK +R L L +HI+ S
Sbjct: 187 SVTVRDAISDL------AYLNSADGDYESQYINNAQSEYQKLMRKGSLKLFNHIATKHSV 240
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+ + IP + G ++ L + + ++ +GRL W N +S
Sbjct: 241 DVINKLNLIPPECGKEY---------------LSEELKGNQKFNTTWGRLKW--NTTSST 283
Query: 153 TDPH-PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
D GT HP +R IT RE AR Q F D + F G I ++
Sbjct: 284 IDTRFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEICKQI 333
>gi|384166446|ref|YP_005547825.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|384170648|ref|YP_005552026.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
XH7]
gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|341829927|gb|AEK91178.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
XH7]
Length = 600
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 25/170 (14%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVG-----FSSPYKSEPVLWFQKKIRGDMLVL 82
PF TVRD I DL + +T ME S ++ P+L + +K D ++
Sbjct: 406 STPF---TVRDAIQDLADI---TPLTDMEKAKPLDYIESDAQASPMLRYFRK-DADKGLI 458
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
++HI+ +L+ R + I + G ++ L E + + + N ++ RL
Sbjct: 459 DNHINTESRQLSKTRFEAILQLKGKNFHSLNDE-----LKTTYSDVSRTQNT---IYLRL 510
Query: 143 DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
D+ PT V M HP + R I++RE AR Q F D++KF G
Sbjct: 511 DYGSPSPTVVNVRKSMWS-----HPEKARAISIREAARLQSFPDNFKFRG 555
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
++V+D I DL + +G E YK EP +QK +R D L HI+ S+
Sbjct: 186 VSVKDAISDLNYLESGEGTIQAE------YKIEPQSDYQKIMRADRLQY--HIASNHSKA 237
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ + + I + G + CLP ++ +GRL W+ PT +
Sbjct: 238 AINKLKMIAPECGKE---------------CLPTHLHGKQKFSTTWGRLVWDDVSPT-ID 281
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP R IT RE AR Q F D++ F G
Sbjct: 282 TRFDTPSNGKNSHPVLHRAITPREAARIQSFDDNFYFKG 320
>gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|384161535|ref|YP_005543608.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens
TA208]
gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens
TA208]
Length = 597
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 25/170 (14%)
Query: 28 GAPFRAITVRDTIGDLPAVGNGASVTTMEVG-----FSSPYKSEPVLWFQKKIRGDMLVL 82
PF TVRD I DL + +T ME S ++ P+L + +K D ++
Sbjct: 403 STPF---TVRDAIQDLADI---TPLTDMEKAKPLDYIESDAQASPMLRYFRK-DADKGLI 455
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
++HI+ +L+ R + I + G ++ L E + + + N ++ RL
Sbjct: 456 DNHINTESRQLSKTRFEAILQLKGKNFHSLNDE-----LKTTYSDVSRTQNT---IYLRL 507
Query: 143 DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
D+ PT V M HP + R I++RE AR Q F D++KF G
Sbjct: 508 DYGSPSPTVVNVRKSMWS-----HPEKARAISIREAARLQSFPDNFKFRG 552
>gi|219848287|ref|YP_002462720.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219542546|gb|ACL24284.1| DNA-cytosine methyltransferase [Chloroflexus aggregans DSM 9485]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ + L+L R + IP GS LP ++L C N +H + ++GRLD+
Sbjct: 226 HKARKHTPLSLERLKHIPHNGGS-RDSLP----IELQLSCHRNG--RHGGYHDVYGRLDF 278
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL--- 201
E T T + G HP DR IT RE AR Q F D+Y+F G + I ++
Sbjct: 279 ERPANTLTTGCTNV-TKGRFAHPTSDRAITPREAARLQTFPDTYRFYGSYEKISAQIGNA 337
Query: 202 ---------EMLFHLLW 209
FH LW
Sbjct: 338 VPVKLAEIFAQYFHELW 354
>gi|158321055|ref|YP_001513562.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141254|gb|ABW19566.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 448
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
F +T ++ IGDLP + +G + + S + E + FQ+ +R D + + +H S++
Sbjct: 256 FENMTTKNAIGDLPKLKSGQGSDFDTLNYVSN-EGESLSAFQRLMRADSIGVINHKSRSN 314
Query: 91 SELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
E +L +K + S R++ ++ +P H K R F
Sbjct: 315 QERDLRIYKKAIEFAESGKRLMYTD---------IPEEDRTHKNEKAFLDR------FKV 359
Query: 151 SVTDPHPMGMVGTC-------FHP--NQDRIITVRECARSQGFSDSYKFVG 192
+ + P +V HP NQ R +TVRE AR Q F D+Y F G
Sbjct: 360 HMKNEIPHTIVAHISKDGHYNIHPDINQCRSLTVREAARIQSFPDNYIFEG 410
>gi|254932546|ref|ZP_05265905.1| cytosine methyl transferase [Listeria monocytogenes HPB2262]
gi|405748671|ref|YP_006672137.1| cytosine methyl transferase [Listeria monocytogenes ATCC 19117]
gi|424822057|ref|ZP_18247070.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str.
Scott A]
gi|293584103|gb|EFF96135.1| cytosine methyl transferase [Listeria monocytogenes HPB2262]
gi|332310737|gb|EGJ23832.1| DNA (Cytosine-5-)-methyltransferase [Listeria monocytogenes str.
Scott A]
gi|404217871|emb|CBY69235.1| cytosine methyl transferase [Listeria monocytogenes ATCC 19117]
Length = 351
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ +S+LN+ R + PG W+ E L+P C + +K ++GRL+W
Sbjct: 212 HRARKLSDLNIKRIKS--SFPGGTWKDWDEE----LLPNCYKRKS--GESYKSVYGRLEW 263
Query: 145 EGNFPTSVTDPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
+ P+S +G F HP QDR +++RE A Q F Y+FV I+
Sbjct: 264 DK--PSSTITTQFVGYGNGRFGHPEQDRALSLREGAILQTFPKDYQFVEKIEQ 314
>gi|116871711|ref|YP_848492.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740589|emb|CAK19709.1| cytosine methyl transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 351
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ +S+LN+ R + PG W+ E L+P C + +K ++GRL+W
Sbjct: 212 HRARKLSDLNIKRIKS--SFPGGTWKDWDEE----LLPNCYKRKS--GESYKSVYGRLEW 263
Query: 145 EGNFPTSVTDPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
+ P+S +G F HP QDR +++RE A Q F Y+FV I+
Sbjct: 264 DK--PSSTITTQFVGYGNGRFGHPEQDRALSLREGAILQTFPKDYQFVEKIEQ 314
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
I +R + DLP + +G S +G+ P + P L F + D L++HIS
Sbjct: 186 INLRLALDDLPQIKSGESGD--HLGYRHP-ANNPFLEFVR----DSPTLSEHISPK---- 234
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
N R +I + Q G D R LP P P + + + ++ WE PT
Sbjct: 235 NNPRLVQIMEALQDGQDKRDLP--------PALRPKSG-----YANTYAKMHWEQPAPT- 280
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+T C HP R +++RE AR Q F DSY F G+
Sbjct: 281 ITRNFATPSSSRCIHPRDSRALSIREGARLQSFPDSYIFCGN 322
>gi|218128915|ref|ZP_03457719.1| hypothetical protein BACEGG_00487 [Bacteroides eggerthii DSM 20697]
gi|217988878|gb|EEC55195.1| DNA (cytosine-5-)-methyltransferase [Bacteroides eggerthii DSM
20697]
Length = 361
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +A+S LN+ R + P G WR P E +++ + E + ++GR+ W
Sbjct: 225 HRCRALSALNMRRIEATPY--GGSWRDWPEELMLNC------HKKEGGKSFGSVYGRMTW 276
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
E PT T +G G HP Q+R I+ RE A Q F YKF + Q +
Sbjct: 277 EEPAPTMTTLCTGIGN-GRFGHPVQNRAISAREAALFQTFPIKYKFFPNEQEV 328
>gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
Length = 375
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 60/161 (37%), Gaps = 45/161 (27%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDLP N +N H + SEL+
Sbjct: 216 TVRDAIGDLPLEPNN--------------------------------INRHDFRNASELS 243
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG---NFPTS 151
+ R + IP PG + + +P E + C N K L GRL W+ T
Sbjct: 244 IRRYKAIP--PGGNRKNIPDEIQLP----CWKNKNPKSGGSADLMGRLLWDQPALTIRTE 297
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
P G HP R ITVRE AR Q F D +KF G
Sbjct: 298 FLKPEK----GRYLHPQAHRSITVREGARLQTFPDDFKFAG 334
>gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 434
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 20 AAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM 79
+++ A+ PFR TV+D IGDLPA +R +
Sbjct: 225 SSIPYIADAQPFR--TVKDAIGDLPAPQGTI------------------------VRPEA 258
Query: 80 LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLF 139
L+ H + + +L R + IP++ + RV +L P C K + LF
Sbjct: 259 PPLDLHFGRTPTAKSLERYRSIPEEGMN--RVDLKRIAPELTPDCW---MRKKSGGTDLF 313
Query: 140 GRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
GRL W T T+ + G HP QDR IT RE AR Q F D +KF G I
Sbjct: 314 GRLWWNKPSVTIRTEFY-KPEKGRYLHPVQDRPITHREAARFQSFPDEFKFTGSKVEIAK 372
Query: 200 RL 201
++
Sbjct: 373 QI 374
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 61 SPYKSEPVLWFQKKIRGDM---LVLNDHISKAMSELNLIRCQ-KIPKQPGSDWRVLPSEK 116
PY SEP+ +QK +R + ++ +K E ++I C +P + ++ LP+E
Sbjct: 1185 EPYTSEPLSRYQKWMRRGVDPDEGVSYQYTKRYKE-SVIECVVNVPLKENANHINLPNEL 1243
Query: 117 VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
+ + ++ ++ R++ + +F T++T +P G HP Q R++T+R
Sbjct: 1244 KNKRWYTGGQISGKPKPEYLTIYARVNGKWHFQTALTSANPNAKGGRLLHPTQKRVLTIR 1303
Query: 177 ECARSQGFSDSYKFVG 192
E AR+QGF D KF+
Sbjct: 1304 EFARAQGFPDQQKFLS 1319
>gi|28198487|ref|NP_778801.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1]
gi|182681164|ref|YP_001829324.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23]
gi|386084664|ref|YP_006000946.1| DNA-cytosine methyltransferase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|28056571|gb|AAO28450.1| site-specific DNA-methyltransferase [Xylella fastidiosa Temecula1]
gi|182631274|gb|ACB92050.1| DNA-cytosine methyltransferase [Xylella fastidiosa M23]
gi|307579611|gb|ADN63580.1| DNA-cytosine methyltransferase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 355
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++S LN+ R + +PG WR P+ L C + + + ++GR++W
Sbjct: 218 HTAASLSALNMSRIRA--SRPGGTWRDWPAA----LRAAC--HCKDTGATYPSVYGRMEW 269
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR I++RE A Q F SY+F
Sbjct: 270 DQPAPTITTQCFGYGN-GRFGHPEQDRAISLREAAILQTFPKSYRFA 315
>gi|425460030|ref|ZP_18839514.1| Modification methylase HgiDII [Microcystis aeruginosa PCC 9808]
gi|389827351|emb|CCI21444.1| Modification methylase HgiDII [Microcystis aeruginosa PCC 9808]
Length = 350
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC-LPNTAEKHNQWKGLFGRLD 143
H +S LNL R + +PG W P E LI C L N+ + + ++GR++
Sbjct: 212 HQCSNLSALNLRRIRV--SKPGGTWSDWPEE----LIASCHLKNSGKT---YPSVYGRME 262
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IG 199
WE PT T G G HP QDR I++RE A Q F +Y+F+ + + IG
Sbjct: 263 WEQPSPTITTQFFGYGN-GRFGHPEQDRAISLREAALLQTFPQNYQFLSPNEPVVFDRIG 321
Query: 200 RL 201
RL
Sbjct: 322 RL 323
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPS---EKVVDLIPWCLPNTAEKHNQWKG 137
+LND +SEL+L + +P+ G +W+ +P EK L+ + T +
Sbjct: 561 ILNDK-QYTLSELDLEIIKSVPQ--GGNWKNIPDKTIEKSKRLMK--IRETGGRTT---- 611
Query: 138 LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
L+GR+D+ N ++T G HP QDR++T RE AR Q F D Y F G+ + I
Sbjct: 612 LYGRIDYT-NPSYTITTYFNRPGNGCYIHPTQDRVLTTREGARIQCFPDDYYFYGNQRDI 670
Query: 198 IGRL 201
+ ++
Sbjct: 671 LNQI 674
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 29/172 (16%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLN 83
N + I+V + +GDLP+ V Y +EP+ +Q K+R + +
Sbjct: 182 GNDGKLKWISVEEALGDLPSPNTDGIVK---------YSTEPLNPYQLKMRENNFDDYVT 232
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H + +SEL+ + + IP G ++ +P D +P +++ ++K GR
Sbjct: 233 EHSTPKLSELDKMIIEHIPV--GGNYMDVP-----DFVP------SQRIKKFKETGGRTT 279
Query: 144 WEGNF----PTSVTDPH-PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
G P+ + H VG H + R+ITVRE R QGF D+YK
Sbjct: 280 CYGRLRPDKPSYTINTHFNKPNVGCNIHYKEKRLITVREALRLQGFPDNYKI 331
>gi|418058858|ref|ZP_12696822.1| C-5 cytosine-specific DNA methylase [Methylobacterium extorquens
DSM 13060]
gi|373567599|gb|EHP93564.1| C-5 cytosine-specific DNA methylase [Methylobacterium extorquens
DSM 13060]
Length = 149
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 38/162 (23%)
Query: 36 VRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNL 95
+RD I LPA+ G G+ + +H + +SE NL
Sbjct: 1 MRDAIAHLPAIAAG---------------------------GEHPEIPNHKASGLSETNL 33
Query: 96 IRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDP 155
R Q IP PG+D R DL C E + + ++GR+ W+ P T
Sbjct: 34 RRIQAIP--PGADRRAWSD----DLKLAC----HEGVDGYTDVYGRMAWDRPAPALTTRC 83
Query: 156 HPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+ + G HP Q R ++ RE A Q F D + FVG ++ +
Sbjct: 84 NSISN-GRFGHPCQHRAVSAREAAALQSFPDDFVFVGSMEAV 124
>gi|353236422|emb|CCA68417.1| hypothetical protein PIIN_02281 [Piriformospora indica DSM 11827]
Length = 1109
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 83/214 (38%), Gaps = 61/214 (28%)
Query: 19 YAAVRSTANGAPFRAITVRDTIGDLPA--------------------------------- 45
Y R N AP A+TV D I DLP
Sbjct: 868 YTVSRRRENNAPLYAVTVGDAITDLPQWEWVNPHKLYKRTTRVKQEELERRWKHGILAID 927
Query: 46 VGNGASVTTMEV-GFSSP--YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIP 102
V + T++ V G SP Y + +Q +R + H + A++EL + R IP
Sbjct: 928 VKSQPISTSLPVCGPDSPLQYPLPALTNYQLLMRERSTTVTQHWTPALNELEIERVCNIP 987
Query: 103 KQPGSDWRVLPSEK----VVDLIPWCL--PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPH 156
+ RV+P ++DL P L P A++ Q G +GRLD E F TS+
Sbjct: 988 FKSKRGDRVVPDHHGGIFLLDL-PSRLRRPGWADRQ-QLDGRYGRLDAEDVFATSL---- 1041
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
RI+T+RE ARSQGF D F
Sbjct: 1042 -------------HRILTIREAARSQGFPDHIDF 1062
>gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 476
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G W+ LP E + + L K G F R+ W+ PT VTDP M C
Sbjct: 322 GQYWKHLPQEVQYEAMGEKLKLGGGKT----GFFRRVGWDEPSPTLVTDPT-MPATDLC- 375
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
HP++DR ++++E AR Q F D +KF G+++ + ++
Sbjct: 376 HPDKDRPLSIQEYARIQEFPDDWKFFGEMKDVYKQI 411
>gi|300118609|ref|ZP_07056347.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1]
gi|298723998|gb|EFI64702.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus SJ1]
Length = 602
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL + S+ + ++ ++ + + + D ++ N HI+ L+
Sbjct: 416 TVRDAIGDLEGITPAKSIESHKIEYNIELNKTVMQHYYRSGMNDNVIYN-HINTDSEPLS 474
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
R ++I + G ++ L SE L + + N ++ RL+++ PT +
Sbjct: 475 QQRFEEIKRTDGKNFHSLSSE----LKDVSYTDASRTQN---TVYLRLNYDTPSPTVINV 527
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M HP + +++RE AR Q F D+Y F G
Sbjct: 528 RKSMWQ-----HPTKATALSIREAARLQSFKDNYIFKG 560
>gi|448677074|ref|ZP_21688568.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
gi|445774722|gb|EMA25737.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
Length = 379
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 34 ITVRDTIGDLPAV-GNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
+TV+ I DLP + G ME ++ SE V ++ + +++ +H + E
Sbjct: 199 VTVKQAISDLPELPTGGGGEMRMEYSPNNSGISEYVAKMRRNEKKSIVM--NHRTTRNQE 256
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
R + IP+ G +WR +P + + N + ++ RLD + T
Sbjct: 257 KTYRRFKHIPQ--GGNWRDIPED--------LMKNYTNRQQTHDHIYQRLDEDEPAKTVA 306
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M HP Q+R+++VRE AR Q F D Y F G
Sbjct: 307 NFRKQM-----IVHPTQNRLLSVREAARLQSFPDDYHFKG 341
>gi|393213319|gb|EJC98816.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 871
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 63 YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP------SEK 116
Y+ EP +Q + R H++ +++ + +P + GS ++ L E+
Sbjct: 692 YEHEPRTAYQARCRRRPASELQHVTYCFNDITIEATVNVPLEGGSSFKDLNHKPKLWKER 751
Query: 117 VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVR 176
+ L + +H +F RL+ + F T VT+ P +P R++TVR
Sbjct: 752 INPL------SANARHGYKTHMFVRLEADKCFNTIVTNIGPTAKQSKVLNPWCKRLVTVR 805
Query: 177 ECARSQGFSDSYKF 190
E ARSQGF D+++F
Sbjct: 806 ELARSQGFPDAFEF 819
>gi|71731058|gb|EAO33126.1| C-5 cytosine-specific DNA methylase [Xylella fastidiosa Ann-1]
Length = 387
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++S LN+ R + +PG WR P+ L C + + + ++GR++W
Sbjct: 218 HTAASLSALNMSRIRA--SRPGGTWRDWPAA----LRAAC--HCKDTGATYPSVYGRMEW 269
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR I++RE A Q F SY+F
Sbjct: 270 DQPAPTITTQCFGYGN-GRFGHPEQDRAISLREAAILQTFPKSYRFA 315
>gi|456873390|gb|EMF88765.1| DNA (cytosine-5-)-methyltransferase [Leptospira santarosai str.
ST188]
Length = 350
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 69/173 (39%), Gaps = 58/173 (33%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
PFR TVRD IG P + G+ D V N H+S +
Sbjct: 187 PFR--TVRDAIGRFPDILAGSV--------------------------DKHVPN-HVSAS 217
Query: 90 MSELNLIRCQKIPKQPGS--DWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGN 147
+S++NL R PK G DW P +D C N + H ++GR+ W+
Sbjct: 218 LSKINLERISLTPKNGGCRFDW---PKHLELD----CHKNGFKGHTD---VYGRMSWDQP 267
Query: 148 FPTSVTDPHPMGMVGTCF--------HPNQDRIITVRECARSQGFSDSYKFVG 192
PT + G C HP Q+R I++RE A Q F D+Y F G
Sbjct: 268 APT---------LTGRCISLSNGRYGHPEQNRAISLREAASLQSFPDNYVFFG 311
>gi|288941188|ref|YP_003443428.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180]
gi|288896560|gb|ADC62396.1| DNA-cytosine methyltransferase [Allochromatium vinosum DSM 180]
Length = 372
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR TIG LPA+ G E+ H++ ++S +N
Sbjct: 196 TVRQTIGMLPAIDAGEIHPEDEL---------------------------HMASSLSPMN 228
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R +K +PG WR P E L C + + ++GR++W+ PT T
Sbjct: 229 LARIKK--SRPGGTWRDWPDE----LKAAC--HRKSSGATYPSVYGRMEWDRPAPTITTQ 280
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G G HP Q R I++RE A Q F Y F
Sbjct: 281 CFGYGN-GRFGHPEQHRAISLREAAMLQTFPADYSFA 316
>gi|340795642|ref|YP_004761105.1| DNA cytosine-5-methyltransferase [Corynebacterium variabile DSM
44702]
gi|340535552|gb|AEK38032.1| DNA cytosine-5-methyltransferase [Corynebacterium variabile DSM
44702]
Length = 464
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP + + + N G F RL WE PT P+ G C
Sbjct: 320 GGNWRSLPEDVAREAMGERSYNAGGGKT---GFFRRLQWEAQSPTITGKPNRKGSA-MC- 374
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP+ R ++V ECAR QGF D ++ VG +
Sbjct: 375 HPSDTRPLSVHECARIQGFPDDWEIVGSV 403
>gi|408826936|ref|ZP_11211826.1| site-specific DNA methylase [Streptomyces somaliensis DSM 40738]
Length = 335
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
++V IGDLPA+ G + TT Y + FQK +RG L H S +
Sbjct: 169 VSVEQAIGDLPALQPGQTATT--------YDRKAESQFQKLMRGGSTTLQGH-SASKHPP 219
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L+ + I P R IP L + HN + L W +
Sbjct: 220 HLV--EAISHIPDGGNRTS--------IPDHLQPKSGFHNSYSRL---ASWLPAVAITQN 266
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
P G C HP QDR +T RE AR Q F DS+ F G
Sbjct: 267 MGKPSGT--RCIHPKQDRGLTTREGARLQSFPDSFCFTG 303
>gi|374998375|ref|YP_004973874.1| Cytosine-specific methyltransferase HgiDII [Azospirillum lipoferum
4B]
gi|357425800|emb|CBS88697.1| Cytosine-specific methyltransferase HgiDII [Azospirillum lipoferum
4B]
Length = 368
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++S +NL R + +PG WR P L C + + + ++GR++W
Sbjct: 219 HTASSLSPINLRRIRA--SKPGGTWRDWPKS----LRAKC--HVRKTGKTYPAVYGRMEW 270
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV-GDIQHIIGRLEM 203
PT T + G G HP QDR I++RE A Q F Y+F+ D + RL
Sbjct: 271 NKPAPTMTTQCYGFGN-GRFGHPEQDRAISLREAALLQSFPPDYQFLDADDEVTFNRLGT 329
Query: 204 LF 205
L
Sbjct: 330 LI 331
>gi|301328257|ref|ZP_07221377.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|300845286|gb|EFK73046.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
Length = 341
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 38/167 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG+LP + +G +++P ND + +A S+LN
Sbjct: 185 TVRDAIGNLPPLEDG--------------QTDP---------------NDILHRA-SKLN 214
Query: 95 LIRCQKIPKQ-PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
I ++I PG W+ P E LI C ++ K + ++GR+ W+ PT T
Sbjct: 215 PINKKRIIHSVPGGTWKDWPKE----LIAACHMKSSGK--GYASVYGRMSWDKPSPTITT 268
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
+ G G HP Q R I++RE A Q F Y FV D + R
Sbjct: 269 LCYGFGN-GRFGHPEQHRAISLREAALLQTFPMDYIFVEDKDKFVIR 314
>gi|213964195|ref|ZP_03392431.1| putative C-5 cytosine-specific DNA methylase [Capnocytophaga
sputigena Capno]
gi|213953162|gb|EEB64508.1| putative C-5 cytosine-specific DNA methylase [Capnocytophaga
sputigena Capno]
Length = 243
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IG LPA+ +G D L H ++ +S L
Sbjct: 83 VTVRDAIGQLPAIKDGEYNEL-----------------------DRL----HYARKLSPL 115
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N R Q+ P G W+ D+ C + E + ++GR+ WE PT T
Sbjct: 116 NKKRIQQTPY--GGSWKDWDD----DIKLAC--HKKESGKSYPSVYGRMKWEEPSPTMTT 167
Query: 154 DPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVGD 193
H +G F HP QDR I++RE + Q F Y F +
Sbjct: 168 --HCIGYGNGRFGHPEQDRAISLREASLFQTFPKDYIFYNE 206
>gi|393774430|ref|ZP_10362795.1| site-specific DNA-methyltransferase [Novosphingobium sp. Rr 2-17]
gi|392720286|gb|EIZ77786.1| site-specific DNA-methyltransferase [Novosphingobium sp. Rr 2-17]
Length = 353
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +SE+N+ R + PG WR P L C + + + ++GR+ W
Sbjct: 216 HRASTLSEMNMKRI--LASVPGGTWRDWPDS----LKAAC--HVRDSGATYPSVYGRMAW 267
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T G G HP Q+R I++RE A QGF Y F+ D + + +GR
Sbjct: 268 DEPSPTITTQCFGYGN-GRFGHPEQNRAISLREAAMLQGFPRGYSFLPDDERVSFATLGR 326
Query: 201 L 201
L
Sbjct: 327 L 327
>gi|450232589|ref|ZP_21898222.1| C-5 cytosine-specific DNA methylase [Escherichia coli O08]
gi|449311828|gb|EMD02150.1| C-5 cytosine-specific DNA methylase [Escherichia coli O08]
Length = 340
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 38/167 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG+LP + +G +++P ND + +A S+LN
Sbjct: 184 TVRDAIGNLPPLEDG--------------QTDP---------------NDILHRA-SKLN 213
Query: 95 LIRCQKIPKQ-PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
I ++I PG W+ P E LI C ++ K + ++GR+ W+ PT T
Sbjct: 214 PINKKRIIHSVPGGTWKDWPKE----LIAACHMKSSGK--GYASVYGRMSWDKPSPTITT 267
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
+ G G HP Q R I++RE A Q F Y FV D + R
Sbjct: 268 LCYGFGN-GRFGHPEQHRAISLREAALLQTFPMDYIFVEDKDKFVIR 313
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 23/120 (19%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDH 85
AN +P +TVRD IGDLP + G EV Y P +Q IR L + +H
Sbjct: 208 ANFSPL--VTVRDAIGDLPPLDAGQDYGE-EV-----YPDAPQTTYQAMIRNKSLKIVNH 259
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWE 145
+++A+S + L R + + + G D R LP E L P +KH + G +GRL W+
Sbjct: 260 VARALSPIQLARARVLGE--GQDARDLPCE----LAP-------KKH--YSGAYGRLYWD 304
>gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG-6]
gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6]
Length = 436
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG-----DMLVLNDH--IS 87
TV D IGDLP + NG E F Y S P+ +Q +RG D+ +++ IS
Sbjct: 216 TVEDAIGDLPPLDNGE-----EKNF---YLSPPMKPYQYLMRGLRLEEDVFTMSEASLIS 267
Query: 88 KAMSELNLIRCQKIPKQPGSDWR---VLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
+ LNL R +PG+ R + P E + D++ P+T + K L
Sbjct: 268 QENYALNLHRAPN--HRPGTIERFKLIRPGEGLRDIMTRLDPDTVADLQKKKILPKSWYI 325
Query: 145 EGNFPTSVTDPHPMGM---VGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ N + +P P + HP Q+R IT RE AR Q F D Y G
Sbjct: 326 QRNRRILLNEPSPTVTSHCLSELLHPLQNRHITPREAARLQSFPDWYYIEG 376
>gi|385226297|ref|YP_005786221.1| cytosine specific DNA methyltransferase [Helicobacter pylori SNT49]
gi|344331210|gb|AEN16240.1| cytosine specific DNA methyltransferase [Helicobacter pylori SNT49]
Length = 171
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 71 FQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAE 130
+Q +R D L +H + S+ L + + I K+ G + CLP
Sbjct: 35 YQALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGKE---------------CLPKNLH 79
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
Q+K +GRL+W PT + GT HP R IT RE AR Q FSD+Y F
Sbjct: 80 GKQQFKSTWGRLNWNKISPT-IDTRFDTPSNGTNSHPELHRSITPREAARIQSFSDNYIF 138
Query: 191 VGD 193
+
Sbjct: 139 YDN 141
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TV I DL + +G E F Y ++P +Q+++R + +L +H + S +
Sbjct: 185 VTVEQAISDLNFLESG------EGDFLQTYPNKPQSHYQQQMRQNSSLLYNHQATNHSSV 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L + IP P D LP+ + ++ +GRL W+ PT +
Sbjct: 239 ALQKLAMIP--PEGDKTSLPAH-------------LKGRQKFDTTWGRLKWQSVSPT-ID 282
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
G HP R IT RE AR Q FSD + F G I ++
Sbjct: 283 TRFDTPSNGCNSHPTLHRAITPREAARLQSFSDDFVFYGKKTEICKQI 330
>gi|407693339|ref|YP_006818128.1| modification methylase [Actinobacillus suis H91-0380]
gi|407389396|gb|AFU19889.1| modification methylase [Actinobacillus suis H91-0380]
Length = 359
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +SE+N+ R +PK G+ L DL C K N +K FGRL W
Sbjct: 223 HSCAGLSEINMQRLSLVPKDGGTR---LAFANRPDLQLKCFIG---KDNYFKDTFGRLWW 276
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F Y F + + I RL
Sbjct: 277 DQPSPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPKDYVFKANGREAIARL 332
>gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
Length = 374
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ RD IGDLPA PV IR ++ LN H + + +
Sbjct: 203 VCTRDAIGDLPA---------------------PV---GTDIRNELPPLNLHFGRNPTPV 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + +P PG + R +K D+ P C +K + LFGRL W+ T T
Sbjct: 239 SLERYKAVP--PGGN-RFDLQKKRPDITPACW---LKKKSGGTDLFGRLWWDKPSVTIRT 292
Query: 154 D---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ P G HP +DR IT RE AR F D++ F G I ++
Sbjct: 293 EFFKPEK----GRYLHPEEDRPITHREAARLMSFPDNFIFTGSKTEIAKQI 339
>gi|161870058|ref|YP_001599227.1| cytosine-specific DNA methylase [Neisseria meningitidis 053442]
gi|161595611|gb|ABX73271.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
meningitidis 053442]
Length = 340
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVR IG LP + G T D+L H +MS
Sbjct: 185 VTVRQAIGHLPPLAAGKQDTI-----------------------DVL----HRCSSMSAR 217
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + +PG W P DL C + +K +K ++GR++W+ PT T
Sbjct: 218 NLERIRA--SRPGGTWMDWPE----DLRAAC--HRKKKGQSYKRIYGRMEWDKPAPTMTT 269
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEMLF 205
G G HP QDR I++RE A Q F Y+F + I ++ +
Sbjct: 270 LCIGFGN-GRFGHPEQDRAISLREAALFQSFPLDYQFTQETDTPIRQISRMI 320
>gi|210630626|ref|ZP_03296529.1| hypothetical protein COLSTE_00414 [Collinsella stercoris DSM 13279]
gi|210160401|gb|EEA91372.1| C-5 cytosine-specific DNA methylase [Collinsella stercoris DSM
13279]
Length = 402
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFG 140
+L++HI+ ++SEL+++ +P+ G +W+ +P + + AE +G
Sbjct: 1 MLDNHIAPSLSELDMMGISYVPE--GGNWKNIPESVPSKRLDQIRRSYAEGKGSRSTYYG 58
Query: 141 RLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
RL + T T+ + G G H QDR +T RE AR Q F D + F+G
Sbjct: 59 RLTRDMPAYTISTNFNRPG-CGCNTHYTQDRTLTYREAARIQSFPDDFVFLG 109
>gi|419882036|ref|ZP_14403310.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|388363105|gb|EIL27049.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
Length = 372
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ RD IGDLPA PV IR ++ LN H + + +
Sbjct: 201 VCTRDAIGDLPA---------------------PV---GADIRNELPPLNLHFGRNPTPV 236
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + +P PG + R +K D+ P C +K + LFGRL W+ T T
Sbjct: 237 SLERYKAVP--PGGN-RFDLQKKRPDITPACW---LKKKSGGTDLFGRLWWDRPSVTIRT 290
Query: 154 D---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ P G HP +DR IT RE AR F D++ F G I ++
Sbjct: 291 EFFKPEK----GRYLHPEEDRPITHREAARLMSFPDNFIFTGSKTEIAKQI 337
>gi|367478095|ref|ZP_09477417.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
gi|365269655|emb|CCD89885.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
Length = 368
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 65/161 (40%), Gaps = 37/161 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I DLPA G + T + LN H + ++++
Sbjct: 194 TVRDAIADLPATPIGTEIGTEKT------------------------LNLHFGRNPTDIS 229
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R +P PG + R + L P C K + LFGRL W+ T T+
Sbjct: 230 LARYAAVP--PGGN-RFDLQRNALHLTPQCW---IRKTSGGTDLFGRLWWDRPSVTIRTE 283
Query: 155 ---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
P G HP ++R IT RE AR GF DS+ F G
Sbjct: 284 FFKPEK----GRYLHPVENRPITHREAARLMGFPDSFHFCG 320
>gi|419208896|ref|ZP_13752002.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|419874476|ref|ZP_14396402.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|420101124|ref|ZP_14612254.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|420107297|ref|ZP_14617649.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|425253383|ref|ZP_18646236.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
gi|378057669|gb|EHW19893.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|388350875|gb|EIL16187.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|394413243|gb|EJE87296.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394418148|gb|EJE91849.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|408185748|gb|EKI11880.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
Length = 372
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ RD IGDLPA PV IR ++ LN H + + +
Sbjct: 201 VCTRDAIGDLPA---------------------PV---GTDIRNELPPLNLHFGRNPTPV 236
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + +P PG + R +K D+ P C +K + LFGRL W+ T T
Sbjct: 237 SLERYKAVP--PGGN-RFDLQKKRPDITPACW---LKKKSGGTDLFGRLWWDRPSVTIRT 290
Query: 154 D---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ P G HP +DR IT RE AR F D++ F G I ++
Sbjct: 291 EFFKPEK----GRYLHPEEDRPITHREAARLMSFPDNFIFTGSKTEIAKQI 337
>gi|383181185|ref|YP_005459190.1| C-5 cytosine-specific DNA methylase [Shigella sonnei 53G]
gi|416282766|ref|ZP_11646533.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
gi|320180750|gb|EFW55676.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
Length = 340
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 38/167 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG+LP + +G +++P ND + +A S+LN
Sbjct: 184 TVRDAIGNLPPLEDG--------------QTDP---------------NDILHRA-SKLN 213
Query: 95 LIRCQKIPKQ-PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
I ++I PG W+ P E L+ C ++ K + ++GR+ W+ PT T
Sbjct: 214 PINKKRIIHSVPGGTWKDWPKE----LVAACHMKSSGK--GYASVYGRMSWDKPSPTITT 267
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
+ G G HP Q R I++RE A Q F Y FV D + R
Sbjct: 268 LCYGFGN-GRFGHPEQHRAISLREAALLQTFPMDYIFVEDKNKFVIR 313
>gi|381179187|ref|ZP_09888045.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768862|gb|EIC02843.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 477
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 137 GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
G F R+ W+ PT VTDP M C HP +DR ++++E AR Q F D +KF G+++
Sbjct: 349 GFFRRVGWDEPSPTLVTDPT-MPATDLC-HPEKDRPLSIQEYARIQEFPDDWKFFGEMKD 406
Query: 197 IIGRL 201
+ ++
Sbjct: 407 VYKQI 411
>gi|424756231|ref|ZP_18184063.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774160|ref|ZP_18201186.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421934668|gb|EKT92421.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949804|gb|EKU06718.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 374
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ RD IGDLPA PV IR ++ LN H + + +
Sbjct: 203 VCTRDAIGDLPA---------------------PV---GTDIRNELPPLNLHFGRNPTPV 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R + +P PG + R +K D+ P C +K + LFGRL W+ T T
Sbjct: 239 SLERYKAVP--PGGN-RFDLQKKRPDITPACW---LKKKSGGTDLFGRLWWDRPSVTIRT 292
Query: 154 D---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ P G HP +DR IT RE AR F D++ F G I ++
Sbjct: 293 EFFKPEK----GRYLHPEEDRPITHREAARLMSFPDNFIFTGSKTEIAKQI 339
>gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
Length = 401
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWF----QKKIRGDMLVLNDHISKA 89
TV+D IGDLP + +++ ++P P L K+I+ D + ++
Sbjct: 205 FTVQDAIGDLPKLDIRDGEFSVK---NTPRNEAPYLKLLNTNAKRIKRDTGFEDGYLYNH 261
Query: 90 MSELNLIRCQKIPKQPGSDWRVL-PSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
+ R ++I +R+L P + + L P +P N + + +LD++
Sbjct: 262 TTRFQNERDREI-------FRILEPFQNLKTLDPDLIP--IRLRNGFDDFYRKLDYKKPS 312
Query: 149 PTSVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDSYKFVG 192
PT + H G+ HP NQ R I+VRE AR Q F D++ F+G
Sbjct: 313 PTIIAHLHKDGL--AFIHPDGNQARSISVREAARLQSFPDNFVFIG 356
>gi|229183237|ref|ZP_04310467.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1]
gi|228600376|gb|EEK57966.1| Site-specific DNA-methyltransferase [Bacillus cereus BGSC 6E1]
Length = 592
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL + S + ++ ++ + + + D ++ N HI+ L+
Sbjct: 406 TVRDAIGDLEGITPAKSTESHKIDYNIELNKTVMQHYYRSGMNDNVIYN-HINTDSEPLS 464
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
R ++I + G ++ L SE L + + N ++ RL+++ PT +
Sbjct: 465 QQRFEEIKRTDGKNFHSLSSE----LKDVSYTDASRTQN---TVYLRLNYDTPSPTVINV 517
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M HP + +++RE AR Q F D+Y F G
Sbjct: 518 RKSMWQ-----HPTKAMALSIREAARLQSFKDNYIFKG 550
>gi|301513566|ref|ZP_07238803.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB058]
Length = 303
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 11 VKLARNSHYAAVRSTANGAPFRAI-TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
V LA S + + +G I TVRD IG+ PA+ G E+ L
Sbjct: 118 VLLASKSGKIEIPAKTHGEGLEPIKTVRDFIGEFPAIKAG------EIHPDD-------L 164
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
W H S ++E NL+R Q P+ G D R P+ LI C
Sbjct: 165 W--------------HRSPTLNERNLVRIQNTPE--GGDRRHWPNH----LINEC----H 200
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDS 187
+ H+ ++GR+ W+ PT T + G HP NQ R I+VRE +R Q F
Sbjct: 201 KAHSGHMDVYGRMSWDKPAPTLTTRCYSYSN-GRFGHPDTNQHRAISVREASRLQTFPQD 259
Query: 188 YKFVGDI 194
+ F G +
Sbjct: 260 FIFKGSV 266
>gi|301348106|ref|ZP_07228847.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB056]
Length = 214
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 11 VKLARNSHYAAVRSTANGAPFRAI-TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
V LA S + + +G I TVRD IG+ PA+ G
Sbjct: 29 VLLASKSGKIEIPAKTHGEGLEPIKTVRDFIGEFPAIKAG-------------------- 68
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+I D L H S ++E NL+R Q P+ G D R P+ LI C
Sbjct: 69 ----EIHPDDLW---HRSPTLNERNLVRIQNTPE--GGDRRHWPNH----LINEC----H 111
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDS 187
+ H+ ++GR+ W+ PT T + G HP NQ R I+VRE +R Q F
Sbjct: 112 KAHSGHMDVYGRMSWDKPAPTLTTRCYSYSN-GRFGHPDTNQHRAISVREASRLQTFPQD 170
Query: 188 YKFVGDI 194
+ F G +
Sbjct: 171 FIFKGSV 177
>gi|261415336|ref|YP_003249019.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790267|ref|YP_005821390.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261371792|gb|ACX74537.1| DNA-cytosine methyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326638|gb|ADL25839.1| cytosine specific DNA methyltransferase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 418
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGT 163
+ G W+ LP E + + L K G F RL W+ PT VTDP M
Sbjct: 265 KAGQYWKDLPEEAQKEAMGSKLQLGGGKT----GFFRRLAWDLPSPTLVTDPT-MPATDL 319
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
C HP++DR ++V+E R Q F D +K GDI+
Sbjct: 320 C-HPDKDRPLSVQEYKRIQEFPDDWKLCGDIK 350
>gi|381158547|ref|ZP_09867780.1| site-specific DNA methylase [Thiorhodovibrio sp. 970]
gi|380879905|gb|EIC21996.1| site-specific DNA methylase [Thiorhodovibrio sp. 970]
Length = 374
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVR TIG LP + G + P GD L H++ ++S LN
Sbjct: 197 TVRQTIGMLPPIDAG--------------EIHP---------GDEL----HMASSLSPLN 229
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + +PG WR P E + + P+ A + ++GR+DW+ PT T
Sbjct: 230 LARIKA--SRPGGTWRDWPDE--LQAVCHRKPSGA----TYPSVYGRMDWDRPAPTITTQ 281
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G G HP Q R I++RE A Q F Y F
Sbjct: 282 CFGYGN-GRFGHPEQPRAISLREAAMLQTFPADYSFA 317
>gi|12275200|emb|CAC22275.1| cytosine methyl transferase [Listeria monocytogenes]
Length = 352
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ +S+LN+ R + PG W+ E L+P C + +K ++GRL+W
Sbjct: 212 HRARKLSDLNIKRIKS--SFPGGTWKDWDEE----LLPNCYKRKS--GESYKSVYGRLEW 263
Query: 145 EGNFPTS-VTDPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
+ P+S +T +G F HP QDR +++RE A Q F Y+FV I+
Sbjct: 264 DK--PSSTITTQFVVGYGNGRFGHPEQDRALSLREGAILQTFPKDYQFVEKIEQ 315
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 80/192 (41%), Gaps = 39/192 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR---GDML-------- 80
+ + + D I DL ++ N S M+ Y ++ FQK IR ++L
Sbjct: 552 KKLELNDAISDLFSIENNESRDDMD------YCGPLLIDFQKFIRLSQSEILGGSIKKKS 605
Query: 81 ---VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP----SEKVVDLIPWC--------- 124
+L+D S M+ + +IPK+ G+ +R LP K V L P
Sbjct: 606 PKSMLHDRRSYEMNFDDYQCACRIPKRKGACFRDLPCVRMQNKKVKLNPDVKREFLASGK 665
Query: 125 --LPNTAEKHNQWKGL--FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
+PN A F R+ W+ PT VT P HP QDR++++R AR
Sbjct: 666 PLVPNYAITFVCGTSPLPFARIWWDKTVPTVVTRAEPHNQ--KILHPEQDRVLSIRGNAR 723
Query: 181 SQGFSDSYKFVG 192
QGF D YK G
Sbjct: 724 LQGFPDFYKLCG 735
>gi|419209725|ref|ZP_13752812.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC8C]
gi|422770583|ref|ZP_16824274.1| modification methylase HgiDII(cytosine-specificmethyltransferase
HgiDII) [Escherichia coli E482]
gi|323942310|gb|EGB38481.1| modification methylase HgiDII(cytosine-specificmethyltransferase
HgiDII) [Escherichia coli E482]
gi|378054956|gb|EHW17224.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC8C]
Length = 210
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 47/193 (24%)
Query: 8 ELKVKLARNSHYAAVRSTANG---APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYK 64
E V +A Y A+ S +G P+ TV+D I +LP + G ++
Sbjct: 31 ERLVLIASKDFYVALPSPTHGVGNTPYS--TVKDWIANLPKIEAGEKHNSIP-------- 80
Query: 65 SEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC 124
DH + +SELNL R + P+ G P E +++ C
Sbjct: 81 -------------------DHEAARLSELNLRRIKCTPE--GGSREFWPDELILE----C 115
Query: 125 LPNTAEKHNQWKGLFGRLDWE--GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
N H ++GRL W+ + T+ + G G HP Q+R I+VRE A Q
Sbjct: 116 HRN----HKGHTDVYGRLSWDKPASGLTTRCISYSNGRFG---HPTQNRAISVREAACLQ 168
Query: 183 GFSDSYKFVGDIQ 195
F YKF+G +Q
Sbjct: 169 TFPLDYKFIGSLQ 181
>gi|301597599|ref|ZP_07242607.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB059]
Length = 309
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 11 VKLARNSHYAAVRSTANGAPFRAI-TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
V LA S + + +G I TVRD IG+ PA+ G
Sbjct: 124 VLLASKSGKIEIPAKTHGEGLEPIKTVRDFIGEFPAIKAG-------------------- 163
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+I D L H S ++E NL+R Q P+ G D R P+ LI C
Sbjct: 164 ----EIHPDDLW---HRSPTLNERNLVRIQNTPE--GGDRRHWPNH----LINEC----H 206
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDS 187
+ H+ ++GR+ W+ PT T + G HP NQ R I+VRE +R Q F
Sbjct: 207 KAHSGHMDVYGRMSWDKPAPTLTTRCYSYSN-GRFGHPDTNQHRAISVREASRLQTFPQD 265
Query: 188 YKFVGDI 194
+ F G +
Sbjct: 266 FIFKGSV 272
>gi|126208670|ref|YP_001053895.1| modification methylase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|126097462|gb|ABN74290.1| modification methylase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +SE+N+ R + +PK G+ R+ +++ DL C K N +K FGRL W
Sbjct: 233 HSCAGLSEINIRRLRLVPKDGGT--RLAFADRP-DLQLKCFIG---KDNYFKDTFGRLWW 286
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F Y F + I RL
Sbjct: 287 DQPSPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPKDYVFKAKGREAIARL 342
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 26 ANGAP-FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND 84
AN P F TV D I DL + +G T+ SP + +F + + L + +
Sbjct: 180 ANLKPIFENTTVHDAIKDLEVLESGQLYNTLFGVELSPIQK---YYFDE----NSLQIEN 232
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +E + R + +P+ G +WR +P E W +++N+ + RLD+
Sbjct: 233 HNISVHNEKVVERIKHVPQ--GGNWRDVPEE------LW----DTKRNNRHSSAYRRLDY 280
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
P+ D M FHP R+ +VRE AR Q F+DS+ F G
Sbjct: 281 SK--PSITIDTGHMNY----FHPVFHRVPSVRESARIQSFNDSFVFYG 322
>gi|229056682|ref|ZP_04196086.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603]
gi|228720618|gb|EEL72179.1| Site-specific DNA-methyltransferase [Bacillus cereus AH603]
Length = 602
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL + S + ++ ++ + + + D ++ N HI+ L+
Sbjct: 416 TVRDAIGDLEGITPAKSTESHKIDYNIELNKTVMQHYYRSGMSDNVIYN-HINTDSEPLS 474
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
R ++I + G ++ L SE L + + N ++ RL+++ PT +
Sbjct: 475 QQRFEEIKRTNGKNFHSLSSE----LKDVSYTDASRTQN---TVYLRLNYDTPSPTVINV 527
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M HP + +++RE AR Q F D+Y F G
Sbjct: 528 RKSMWQ-----HPTKAMALSIREAARLQSFKDNYIFKG 560
>gi|396584377|ref|ZP_10484849.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. ICM47]
gi|395548027|gb|EJG15383.1| DNA (cytosine-5-)-methyltransferase [Actinomyces sp. ICM47]
Length = 340
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 42/182 (23%)
Query: 25 TANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND 84
T AP +TV IGDLP + +G +P+
Sbjct: 177 TPTHAPDEYVTVDSAIGDLPRLASGEHD-----------PRDPL---------------- 209
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLD 143
H ++ +S +NL R Q + G W+ P E LP N G +GR+
Sbjct: 210 HYARRLSPMNLKRAQH--SRQGGTWQDWPIE-------LRLPCQIRDVNASFGSFYGRMR 260
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IG 199
+ PT T P+ G G HP QDR +T+RE A QGF + F G + I +G
Sbjct: 261 ADEPSPTITTQPYNTG-AGRFTHPTQDRGLTLREAAILQGFPKDFIFTGPDEKITLENVG 319
Query: 200 RL 201
RL
Sbjct: 320 RL 321
>gi|53729085|ref|ZP_00134186.2| COG0270: Site-specific DNA methylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307257255|ref|ZP_07539025.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306864105|gb|EFM96018.1| Modification methylase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
Length = 354
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +SE+N+ R + +PK G+ R+ +++ DL C K N +K FGRL W
Sbjct: 223 HSCAGLSEINIRRLRLVPKDGGT--RLAFADRP-DLQLKCFIG---KDNYFKDTFGRLWW 276
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F Y F + I RL
Sbjct: 277 DQPSPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPKDYVFKAKGREAIARL 332
>gi|288573115|ref|ZP_06391472.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568856|gb|EFC90413.1| DNA-cytosine methyltransferase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 350
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 64/157 (40%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IG LP + G EV P P L SE N
Sbjct: 191 TVRDAIGHLPPLSAG------EVDRKDPLHRAPRL---------------------SETN 223
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R ++ +PG W+ DL+ C + + + ++GR+ W+ PT T
Sbjct: 224 LERIKQ--SKPGGTWQDWDE----DLVAKC--HRKKTGTSYLAVYGRMRWDEPAPTMTTL 275
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G G HP+QDR I++RE A Q F + Y FV
Sbjct: 276 CFGYGN-GRFGHPDQDRAISLREAAIFQTFPEDYSFV 311
>gi|419881089|ref|ZP_14402439.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|421776835|ref|ZP_16213437.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|432850040|ref|ZP_20081021.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
gi|388366340|gb|EIL30076.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|408458217|gb|EKJ82006.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|431400932|gb|ELG84290.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
Length = 346
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 76/192 (39%), Gaps = 45/192 (23%)
Query: 8 ELKVKLARNSHYAAVRSTANG---APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYK 64
E V +A Y A+ S +G P+ TV+D I +LP + G ++
Sbjct: 167 ERLVLIASKDFYVALPSPTHGVGNTPYS--TVKDWIANLPKIEAGEKHNSIP-------- 216
Query: 65 SEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC 124
DH + +SELNL R + P+ G P E LI C
Sbjct: 217 -------------------DHEAARLSELNLRRIKCTPE--GGSREFWPDE----LILEC 251
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF-HPNQDRIITVRECARSQG 183
N H ++GRL W+ P S + F HP Q+R I+VRE A Q
Sbjct: 252 HRN----HKGHTDVYGRLSWDK--PASGLTTRCISYSNGRFGHPTQNRAISVREAACLQT 305
Query: 184 FSDSYKFVGDIQ 195
F YKF+G +Q
Sbjct: 306 FPLDYKFIGSLQ 317
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|415865124|ref|ZP_11538058.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|424757713|ref|ZP_18185448.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|421949161|gb|EKU06151.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 354
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 76/192 (39%), Gaps = 45/192 (23%)
Query: 8 ELKVKLARNSHYAAVRSTANG---APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYK 64
E V +A Y A+ S +G P+ TV+D I +LP + G ++
Sbjct: 175 ERLVLIASKDFYVALPSPTHGVGNTPYS--TVKDWIANLPKIEAGEKHNSIP-------- 224
Query: 65 SEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWC 124
DH + +SELNL R + P+ G P E LI C
Sbjct: 225 -------------------DHEAARLSELNLRRIKCTPE--GGSREFWPDE----LILEC 259
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF-HPNQDRIITVRECARSQG 183
N H ++GRL W+ P S + F HP Q+R I+VRE A Q
Sbjct: 260 HRN----HKGHTDVYGRLSWDK--PASGLTTRCISYSNGRFGHPTQNRAISVREAACLQT 313
Query: 184 FSDSYKFVGDIQ 195
F YKF+G +Q
Sbjct: 314 FPLDYKFIGSLQ 325
>gi|169794286|ref|YP_001712079.1| cytosine-specific methyltransferase [Acinetobacter baumannii AYE]
gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|417575262|ref|ZP_12226115.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|421623462|ref|ZP_16064347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|421641908|ref|ZP_16082439.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|421647936|ref|ZP_16088347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|421657072|ref|ZP_16097353.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|421698463|ref|ZP_16138005.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|421795872|ref|ZP_16231947.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|421799550|ref|ZP_16235541.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|400205995|gb|EJO36975.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|404572763|gb|EKA77805.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|408514660|gb|EKK16266.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|408516130|gb|EKK17709.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|408693248|gb|EKL38858.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|408714638|gb|EKL59778.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|410401023|gb|EKP53185.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|410409572|gb|EKP61500.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
Length = 355
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 11 VKLARNSHYAAVRSTANGAPFRAI-TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
V LA S + + +G I TVRD IG+ PA+ G
Sbjct: 170 VLLASKSGKIEIPAKTHGEGLEPIKTVRDFIGEFPAIKAG-------------------- 209
Query: 70 WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTA 129
+I D L H S ++E NL+R Q P+ G D R P+ LI C
Sbjct: 210 ----EIHPDDLW---HRSPTLNERNLVRIQNTPE--GGDRRHWPNH----LINEC----H 252
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDS 187
+ H+ ++GR+ W+ PT T + G HP NQ R I+VRE +R Q F
Sbjct: 253 KAHSGHMDVYGRMSWDKPAPTLTTRCYSYSN-GRFGHPDTNQHRAISVREASRLQTFPQD 311
Query: 188 YKFVGDI 194
+ F G +
Sbjct: 312 FIFKGSV 318
>gi|406924580|gb|EKD61321.1| hypothetical protein ACD_54C00289G0001 [uncultured bacterium]
Length = 359
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +S N+ R + +PG WR P + D + + ++GR+ W
Sbjct: 220 HAASKLSATNMQRIRA--SKPGGTWRDWPEQLRADC------HRKSTGATFPAVYGRMVW 271
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR IT+RE A QGF Y FV
Sbjct: 272 DEPSPTITTQCFGYGN-GRFGHPEQDRAITLREAAMLQGFPVDYSFV 317
>gi|406574563|ref|ZP_11050293.1| DNA-cytosine methyltransferase [Janibacter hoylei PVAS-1]
gi|404556022|gb|EKA61494.1| DNA-cytosine methyltransferase [Janibacter hoylei PVAS-1]
Length = 375
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H++ +S+ NL R + +PG WR P L C + + ++GR+ W
Sbjct: 214 HVASRLSKTNLERIRH--SKPGGTWRDWPDA----LQAAC--HRKSTGATYPSVYGRMSW 265
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR I++RE A Q F YKFV
Sbjct: 266 DDASPTITTQCFGYGN-GRFGHPEQDRAISLREAAILQTFPPKYKFV 311
>gi|238600121|ref|XP_002395057.1| hypothetical protein MPER_04954 [Moniliophthora perniciosa FA553]
gi|215465136|gb|EEB95987.1| hypothetical protein MPER_04954 [Moniliophthora perniciosa FA553]
Length = 105
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHP-NQDRIITVRECARSQGF 184
P + + +GL+GRL FPT+VT+ P G +P R++TVRE ARSQGF
Sbjct: 13 PASWARRKDKRGLYGRLHEHSYFPTTVTNVDPTGKQSWVLNPWKCHRMLTVRELARSQGF 72
Query: 185 SDSYKF 190
D + F
Sbjct: 73 PDHFVF 78
>gi|407004442|gb|EKE20829.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 373
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H + ++S+ +L + +P PG +W+ +P + IP L+GRL
Sbjct: 4 NHTTYSLSKNDLRMVRSVP--PGGNWKNIPLD-----IPSKRLEQIRVSGGRTTLYGRLS 56
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+E T T + G GT HP DR+I+ RE AR Q F D+Y F G
Sbjct: 57 FEKPSYTITTYFNRPGN-GTYIHPIHDRVISAREAARFQSFPDNYIFQG 104
>gi|414158730|ref|ZP_11415023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869385|gb|EKS17347.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 350
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+RDTIG+LP + G + S P H S+ +SELN
Sbjct: 189 TLRDTIGNLPKLKAG------DTDLSDPL---------------------HRSRNISELN 221
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R ++ +PG WR E +++ + + ++GRL+W+ ++T
Sbjct: 222 MKRIKQ--SKPGGTWRDWDEELLLEAY------KKKSGASFGSVYGRLEWDKP-ANTITT 272
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
P G HP+QDR +++RE A Q F Y F
Sbjct: 273 QFPGIGNGRFGHPDQDRALSLREGAMLQTFPRDYLFT 309
>gi|291539795|emb|CBL12906.1| Site-specific DNA methylase [Roseburia intestinalis XB6B4]
Length = 251
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H + ++E+N+ R Q I GS + P + LP + + G++G +D
Sbjct: 117 NHETNGLAEINIQRIQYIRTHGGSRNCLPPHLQ--------LPCHQRNNVGYSGVYGIID 168
Query: 144 WEGNFPTSVTDPHPMGMVGTCF--------HPNQDRIITVRECARSQGFSDSYKFVGD 193
VT P P M G C HP +DR I+VRE AR Q F D++ F G+
Sbjct: 169 --------VTKPAPT-MTGGCICYSKGRYGHPTEDRAISVREAARFQSFPDTFVFHGN 217
>gi|386750285|ref|YP_006223492.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum]
gi|384556528|gb|AFI04862.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 381
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T++D I DL N + + Y + +QK++R V+ +H ++
Sbjct: 213 TIKDAISDLAFKTNKLYIDKQQ------YLKKSASNYQKEMRFMSNVIYNHTLFNHKKIA 266
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R Q I + G +++ L + ++ + G +GRL++ ++T
Sbjct: 267 LERMQHIKQ--GQNYKDLKEKDMIKSV-------------HSGAYGRLEYNKQ-AVTITT 310
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP DR IT+RE AR Q F D + F G
Sbjct: 311 RFDTPSAGRFIHPLFDRTITIREAARLQSFRDDFIFYG 348
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 124 CLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQG 183
LP +++N + +GRLD +F ++T P HP Q R+ +VRE AR+QG
Sbjct: 1129 ALPGEKQENNCF---YGRLDGSAHFKCAMTQFSPTMKNSWPLHPLQKRVYSVRELARAQG 1185
Query: 184 FSDSYKF 190
F DSY F
Sbjct: 1186 FPDSYNF 1192
>gi|145635992|ref|ZP_01791674.1| modification methylase HgiDII [Haemophilus influenzae PittAA]
gi|145266758|gb|EDK06780.1| modification methylase HgiDII [Haemophilus influenzae PittAA]
Length = 343
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 36/157 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
I +++ IG LPA+ G + +P+ H + +++ L
Sbjct: 183 INIKEVIGHLPAINAGEQ-----------HLDDPL----------------HRAVSLNTL 215
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
NL R + KQ GS W+ P E L C ++ + + ++GR+ W+ PT T
Sbjct: 216 NLKRI-RASKQGGS-WKDWPEE----LQLACHKKSSG--STYVSIYGRMKWDEPSPTMTT 267
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ G G HP QDR I++RE A Q F D Y+F
Sbjct: 268 QCYGYGN-GRFGHPEQDRAISLREAAIFQSFPDDYQF 303
>gi|425461897|ref|ZP_18841371.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9808]
gi|389825201|emb|CCI25262.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9808]
Length = 412
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 279 PGGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTER 332
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 333 CHPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV D I DL + +G E YK P +Q+ +R L +H++ S L
Sbjct: 184 TVWDAISDLAFLESGEGEQVQE------YKFIPQSKYQEMMRKHSTNLYNHVATKHSALA 237
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R +P+ G + LP E + I + G +GR+D ++T
Sbjct: 238 IERMMLVPENGGRED--LPEEHLTKSI-------------FSGTWGRMDKNSQ-SVTITT 281
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R ITVRE AR Q F D+ F G
Sbjct: 282 RFDTPSSGRFTHPYLNRAITVREAARIQSFPDNMIFYG 319
>gi|417559184|ref|ZP_12210137.1| Site-specific DNA methylase Dcm [Xylella fastidiosa EB92.1]
gi|338178268|gb|EGO81260.1| Site-specific DNA methylase Dcm [Xylella fastidiosa EB92.1]
Length = 227
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++S LN+ R + +PG WR + L C + + + ++GR++W
Sbjct: 90 HTAASLSALNMSRIRA--SRPGGTWR----DWSAALRAAC--HCKDTGATYPSVYGRMEW 141
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T G G HP QDR I++RE A Q F SY+F
Sbjct: 142 DQPAPTITTQCFGYGN-GRFGHPEQDRAISLREAAILQTFPKSYRFA 187
>gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 412
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 279 PGGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTER 332
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 333 CHPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+ D I DL + +G + Y+ ++Q+ +R L +H++ S++
Sbjct: 186 TIWDAISDLAFLESGEGNEVQD------YRKAAESFYQQVMRKKSTQLYNHVATNHSKVA 239
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + IP P + VLP E + I + G + R+ + +VT
Sbjct: 240 LERLKLIP--PNAGREVLPKEHLTKSI-------------YSGTWTRMRKD-EVSVTVTT 283
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP +R ITVRE AR Q F D ++F G
Sbjct: 284 RFDTPSSGKFTHPFLNRAITVREAARIQSFPDDFRFFG 321
>gi|390438626|ref|ZP_10227076.1| Modification methylase Eco47II [Microcystis sp. T1-4]
gi|389837957|emb|CCI31200.1| Modification methylase Eco47II [Microcystis sp. T1-4]
Length = 412
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 279 PGGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTER 332
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 333 CHPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|440751643|ref|ZP_20930846.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440176136|gb|ELP55409.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 412
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 279 PGGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTER 332
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 333 CHPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|425454122|ref|ZP_18833869.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9807]
gi|389805294|emb|CCI15002.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9807]
Length = 412
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 279 PGGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTER 332
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 333 CHPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|416193569|ref|ZP_11617200.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
ES14902]
gi|325137454|gb|EGC60041.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
ES14902]
Length = 334
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 202 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 255
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 256 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 311
>gi|423621232|ref|ZP_17597038.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD115]
gi|401243565|gb|EJR49934.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD115]
Length = 504
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+ +P + ++ RL W+ S+T P+P V T HP+++RI+T+RECAR
Sbjct: 401 FDIPEEIRPKGKHSNMYKRLSWD---EPSITIPNPRKAVIT--HPSKNRILTIRECARLL 455
Query: 183 GFSDSYKFVGDI 194
G DS+ F G +
Sbjct: 456 GLPDSFTFKGKL 467
>gi|423394267|ref|ZP_17371490.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG1X1-3]
gi|401627040|gb|EJS44924.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG1X1-3]
Length = 504
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+ +P + ++ RL W+ S+T P+P V T HP+++RI+T+RECAR
Sbjct: 401 FDIPEEIRPKGKHSNMYKRLSWD---EPSITIPNPRKAVIT--HPSKNRILTIRECARLL 455
Query: 183 GFSDSYKFVGDI 194
G DS+ F G +
Sbjct: 456 GLPDSFTFKGKL 467
>gi|86749313|ref|YP_485809.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
gi|86572341|gb|ABD06898.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris HaA2]
Length = 358
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H S+A++ NL R ++ +P WR P V C + K + ++GR+ W
Sbjct: 217 HASRALTPRNLARIRQ--SRPAGTWREWPKRMRVA----CHKTGSGK--TYPSVYGRMSW 268
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI----IGR 200
+ PT T + G G HP QDR IT+RE A Q F ++F + IGR
Sbjct: 269 DKPSPTITTQFYGFGN-GRFGHPEQDRAITLREGAILQSFPRDFQFAPTGSRVNFRGIGR 327
Query: 201 L 201
L
Sbjct: 328 L 328
>gi|254671709|emb|CBA09495.1| modification methylase [Neisseria meningitidis alpha153]
Length = 351
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 219 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 272
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 273 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 328
>gi|421907891|ref|ZP_16337756.1| modification methylase [Neisseria meningitidis alpha704]
gi|393290977|emb|CCI73764.1| modification methylase [Neisseria meningitidis alpha704]
Length = 351
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 219 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 272
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 273 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 328
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 38/168 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TV D IG+LP+V +G D +H + +S L
Sbjct: 206 VTVHDAIGNLPSVKHGTE------------------------HPDNQNYPNHRAAMLSAL 241
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNT--AEKHNQWKGLFGRLDWEGNFP-- 149
NL R + DW P L+P C +++ + RL W P
Sbjct: 242 NLERIRHTGANGRRDW---PER----LLPKCYAQKKDGKRYEGHSDCYTRLAWGEPAPGL 294
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T+ + G G HP QDR IT+RE A+ QGF D + F G + +
Sbjct: 295 TTRCISYSNGRFG---HPEQDRAITIREAAKLQGFPDDFIFTGSLNSM 339
>gi|387879685|ref|YP_006309988.1| cytosine methyl transferase [Streptococcus parasanguinis FW213]
gi|386793137|gb|AFJ26172.1| cytosine methyl transferase [Streptococcus parasanguinis FW213]
Length = 354
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 40/159 (25%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLND--HISKAMSE 92
T+RDTIG+LP + G + LND H S+ +SE
Sbjct: 194 TLRDTIGNLPELKAGDTD-----------------------------LNDPLHRSRNLSE 224
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
LN+ R ++ +PG W+ E +++ + ++ ++GRL+W+ ++
Sbjct: 225 LNMKRIKQ--SKPGGTWKDWDEELLLEAY------KKKSGESFRSVYGRLEWD-QPSNTI 275
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T P G HP QDR +++RE A Q F Y F
Sbjct: 276 TTQFPGIGNGRFGHPEQDRALSLREGAMLQTFPREYLFT 314
>gi|444301295|gb|AGD98763.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + E F S + +Q +R D L ++ +
Sbjct: 184 PSQSVNVQDAIRDL------AYFCSNEGAFESDKVNPIQSSYQALMRKDSPKLYNNQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALDKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKIGP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
T + GT HP R IT RE AR Q FSD+
Sbjct: 283 T-IDTRFDTPSKGTNSHPEFHRSITPREAARIQSFSDN 319
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +++ V+D I DL A + E F S + +Q +R D L ++ +
Sbjct: 184 PSQSVNVQDAIRDL------AYFCSNEGAFESDKVNPIQSSYQALMRKDSPKLYNNQATN 237
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
S+ L + + I K+ G + CLP Q+K +GRL+W P
Sbjct: 238 HSQAALDKLKLINKEQGKE---------------CLPKNLHGKQQFKSTWGRLNWNKIGP 282
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
T + GT HP R IT RE AR Q FSD+
Sbjct: 283 T-IDTRFDTPSKGTNSHPEFHRSITPREAARIQSFSDN 319
>gi|254804174|ref|YP_003082395.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|304388624|ref|ZP_07370688.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria
meningitidis ATCC 13091]
gi|254667716|emb|CBA03597.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|304337441|gb|EFM03611.1| possible DNA (cytosine-5-)-methyltransferase [Neisseria
meningitidis ATCC 13091]
Length = 351
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 219 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 272
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 273 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 328
>gi|121635670|ref|YP_975915.1| cytosine-specific DNA methylase [Neisseria meningitidis FAM18]
gi|218767413|ref|YP_002341925.1| cytosine-specific DNA methylase [Neisseria meningitidis Z2491]
gi|385324953|ref|YP_005879392.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis 8013]
gi|385337262|ref|YP_005891135.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis WUE 2594]
gi|416179979|ref|ZP_11611281.1| modification methylase [Neisseria meningitidis M6190]
gi|120867376|emb|CAM11148.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
meningitidis FAM18]
gi|121051421|emb|CAM07714.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
meningitidis Z2491]
gi|261393340|emb|CAX50974.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis 8013]
gi|319409676|emb|CBY89977.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis WUE 2594]
gi|325131421|gb|EGC54130.1| modification methylase [Neisseria meningitidis M6190]
Length = 351
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 219 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 272
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 273 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 328
>gi|448485280|ref|ZP_21606564.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445818256|gb|EMA68116.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 403
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 24/153 (15%)
Query: 40 IGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQ 99
IGDLP VG G T Y +EP Q +RGD L H + +E +
Sbjct: 200 IGDLPEVGPGEEKTE--------YDAEPTTVIQDDLRGDNTELTHHQAANHTEDMVEMIS 251
Query: 100 KIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
I G + +P E L ++ HN + RLD + ++T
Sbjct: 252 HISD--GGNRTEIPDE---------LQPSSGYHNSYS----RLDSQ-EPAVAITSNMSKP 295
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP Q R +T RE AR Q F D Y+F G
Sbjct: 296 SSARCIHPFQHRGLTPREGARLQTFPDWYRFDG 328
>gi|444302585|gb|AGD99091.1| chromomethyltransferase 3, partial [Quercus suber]
Length = 67
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 141 RLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQ 195
RL W+ PT VT P HP Q+R++T+RE AR QGF D YK G ++
Sbjct: 1 RLWWDETVPTVVTRAEPHNQ--AILHPVQNRVLTIRENARLQGFPDCYKLCGPVK 53
>gi|385856021|ref|YP_005902534.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
M01-240355]
gi|416165175|ref|ZP_11607360.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
N1568]
gi|325127388|gb|EGC50322.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
N1568]
gi|325204962|gb|ADZ00416.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
M01-240355]
Length = 330
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 198 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 251
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 252 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 307
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRG 77
AP+R ITVRD++ DLP + NGA +E+ Y EP FQKKIRG
Sbjct: 1353 APYRTITVRDSMSDLPTINNGAQ--KLEIS----YDGEPQSDFQKKIRG 1395
>gi|402819081|ref|ZP_10868654.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus alvei DSM 29]
gi|402503270|gb|EJW13812.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus alvei DSM 29]
Length = 298
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 137 GLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
++ RL+W+ S+T +P HP +DRI++VRECAR QG DS+ F G +
Sbjct: 207 NMYKRLEWDK---PSITIVNPRK--SMILHPEEDRILSVRECARIQGLPDSFSFCGSL 259
>gi|385340859|ref|YP_005894731.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
G2136]
gi|416208711|ref|ZP_11621155.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
961-5945]
gi|325141454|gb|EGC63930.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
961-5945]
gi|325199103|gb|ADY94559.1| cytosine-specific methyltransferase HgiDII [Neisseria meningitidis
G2136]
Length = 330
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S++NL R IPK G+ L + +L C K N +K FGRL W
Sbjct: 198 HSCAGLSDINLKRLALIPKNGGNR---LAFAHIPELQLECFIG---KDNSFKDTFGRLWW 251
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+ PT T + G HP +DR +++RE A Q F +Y F + I RL
Sbjct: 252 DKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARL 307
>gi|206972340|ref|ZP_03233286.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
gi|206732665|gb|EDZ49841.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
Length = 503
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+ +P + ++ RL W+ S+T P+P V T HP+++RI+T+RECAR
Sbjct: 400 FDIPEEIRPKGKHSNMYKRLSWD---EPSITIPNPRKAVIT--HPSKNRILTIRECARLL 454
Query: 183 GFSDSYKFVGDI 194
G DS+ F G +
Sbjct: 455 GLPDSFTFKGTL 466
>gi|354604498|ref|ZP_09022487.1| hypothetical protein HMPREF9450_01402 [Alistipes indistinctus YIT
12060]
gi|353347077|gb|EHB91353.1| hypothetical protein HMPREF9450_01402 [Alistipes indistinctus YIT
12060]
Length = 356
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
P + +TV TIG+LP + G + + D L H ++
Sbjct: 187 TPDQYVTVEQTIGNLPPLVAGETD-----------------------KKDSL----HRAR 219
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
A+S LN+ R + P G W+ P + L C + E + ++GR+ W+
Sbjct: 220 ALSPLNMERMRATPY--GGSWKDWP----IHLQLEC--HKRESGQSFGSVYGRMKWDAPA 271
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
PT T +G G HP QDR I++RE A Q F Y F ++I
Sbjct: 272 PTMTTLCTGIGN-GRFGHPTQDRAISLREAALFQTFPKGYSFFAPDENI 319
>gi|126700764|ref|YP_001089661.1| DNA-methyltransferase [Clostridium difficile 630]
gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile 630]
Length = 541
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IGDL AS +M+ F + +++K I + N H+ +
Sbjct: 355 VTVRDAIGDLAEYE--ASKGSMDYCFEKNSNNIEKDFYRKIILDSNKIYN-HVCTDTRNI 411
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNT-AEKHNQWKGLFGRLDWEGNFPTSV 152
L R + I + G+++ LP E L T A+ ++ RL ++ T V
Sbjct: 412 ALKRFEYINQ--GNNFHSLPDE---------LKGTYADPERTQNTIYKRLVYDKPSDTVV 460
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP ++R ++ RE AR Q F DSYKF+G
Sbjct: 461 NVRKSMWI-----HPIKNRAVSAREAARLQSFPDSYKFLG 495
>gi|422733858|ref|ZP_16790157.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1341]
gi|315169253|gb|EFU13270.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX1341]
Length = 521
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
KG+ RLD E PT VT P HP +RI+TVRE AR Q F DS++F+G
Sbjct: 426 KGIRTRLDVENVSPTMVTLPDDF------IHPYFNRILTVREMARLQSFDDSFEFLG 476
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 22/168 (13%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TV I DL + +G E F Y ++P +Q+++R + +L +H + S +
Sbjct: 185 VTVEQAISDLNFLESG------EGDFLQTYPNKPQSHYQQQMRQNSSLLYNHQATNHSSV 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L + IP P D LP+ + ++ +GRL W+ PT +
Sbjct: 239 ALQKLAMIP--PEGDKTSLPAH-------------LKGRQKFDTTWGRLKWQSVSPT-ID 282
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
G HP R IT RE AR Q F D + F G I ++
Sbjct: 283 TRFDTPSNGCNSHPTLHRAITPREAARLQSFPDDFVFYGKKTEICKQI 330
>gi|420414837|ref|ZP_14913953.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033804|gb|EJB34865.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG---LFG 140
+H + +S+L++ + +P+ G +W+ + E +K Q G L+G
Sbjct: 66 NHTTSKLSDLDIEMIETVPQ--GGNWKHIRQE------TRQKSKRLQKIAQTGGRTTLYG 117
Query: 141 RLDWEGNFPT-SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
R+D+ N P+ ++T GT HP +R+I+VRE AR Q F D Y F G+ + I+
Sbjct: 118 RIDY--NKPSYTITTCFNRPGNGTYVHPIHNRVISVREAARFQTFQDDYYFYGNKKEILN 175
Query: 200 RL 201
++
Sbjct: 176 QV 177
>gi|322377723|ref|ZP_08052213.1| modification methylase HgiDII [Streptococcus sp. M334]
gi|321281488|gb|EFX58498.1| modification methylase HgiDII [Streptococcus sp. M334]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+RDTI LP + G + YK +P+ H + +S+LN
Sbjct: 189 TLRDTIEKLPEIKAGET-----------YKHDPL----------------HRCRNLSDLN 221
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R ++ +PG WR + +++ + + ++GRL+W+ ++T
Sbjct: 222 LKRIRQ--SKPGGTWRDWDDDLLLEAY------KKDSGKTFGSVYGRLEWDKP-ANTITT 272
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
P G HP QDR +++RE A Q F +Y+FV
Sbjct: 273 QFPGIGNGRFGHPEQDRALSLREGALLQTFPLNYEFV 309
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG---LFG 140
+H + +S+L++ + +P+ G +W+ + E +K Q G L+G
Sbjct: 66 NHTTSKLSDLDIEMIETVPQ--GGNWKHIRQE------TRQKSKRLQKIAQTGGRTTLYG 117
Query: 141 RLDWEGNFPT-SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIG 199
R+D+ N P+ ++T GT HP +R+I+VRE AR Q F D Y F G+ + I+
Sbjct: 118 RIDY--NKPSYTITTCFNRPGNGTYVHPIHNRVISVREAARFQTFQDDYYFYGNKKEILN 175
Query: 200 RL 201
++
Sbjct: 176 QV 177
>gi|419781691|ref|ZP_14307507.1| DNA (cytosine-5-)-methyltransferase [Streptococcus oralis SK610]
gi|383183999|gb|EIC76529.1| DNA (cytosine-5-)-methyltransferase [Streptococcus oralis SK610]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
T+RDTIG LP + G + + +P+ H + +S+LN
Sbjct: 189 TLRDTIGKLPEIKAGETS-----------EHDPL----------------HRCRNLSDLN 221
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R ++ +PG WR + VDL+ + K + ++GRL+W+ ++T
Sbjct: 222 LKRIRQ--SKPGGTWR----DWDVDLLLEAYKKDSGK--TFGSVYGRLEWDKP-ANTITT 272
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
P G HP QDR +++RE A Q F +Y+FV
Sbjct: 273 QFPGIGNGRFGHPEQDRALSLREGALLQTFPLNYEFV 309
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDH-ISKAMSEL 93
T+ D I DLP + G VT ++ P ++E +Q+ +R + L+ H +K S++
Sbjct: 149 TIMDAIDDLPELEAGEEVTE----YTKPAQNE----YQETMRKNSNELSLHKATKHQSKM 200
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
I P + + + S++V D+ + + +++ + NF
Sbjct: 201 MTIIRHSGPNKEATIENLQASDEVDDVEDYISSGYSSSYSRLDPDLPSVTITMNFI---- 256
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
HP C HP QDR +T RE AR Q F D ++FVG I+ ++
Sbjct: 257 --HPAS--NKCIHPYQDRALTPREGARIQSFPDDFEFVGSRSDIVEQI 300
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMS 91
I+V + +GDLP+ V Y EP+ +Q K+R + + +H + +S
Sbjct: 190 ISVEEALGDLPSPNTDGIVK---------YSKEPLTPYQLKMRENNFDDYVTEHSTPKLS 240
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG---NF 148
EL+ + + IP G ++ +P D +P ++ +GRL +
Sbjct: 241 ELDKMIIEHIPV--GGNYMDVP-----DFVPSQRIKKFKETGGRTTCYGRLRPDKPSYTI 293
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
T P+ VG H + R+ITVRE R QGF D+YK
Sbjct: 294 NTYFNRPN----VGCNIHYKEKRLITVREALRLQGFPDNYKI 331
>gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
Length = 352
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
R + V++ + ++ A T M G S+ + K + G H+ +A +
Sbjct: 180 RHVPVKNVLANVSA---SVVTTAMHPGRSTSFN-------DKNLAGPFTPAEMHVGRAYT 229
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLDWEGNFPT 150
EL+L R IP+ G+ + + ++ DL+P C N H G + GRL+W+ T
Sbjct: 230 ELSLARFAAIPEN-GNRFDL--AKNRPDLLPECWRN----HTTGSGDVMGRLNWDKPSVT 282
Query: 151 SVTD---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T+ P G HP + R IT E A QGF +KFVG I
Sbjct: 283 IRTEFFKPEK----GRYLHPTEHRAITHYEAALIQGFPADHKFVGSKTAI 328
>gi|423314738|ref|ZP_17292671.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
gi|392681485|gb|EIY74843.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
Length = 388
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 80 LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLF 139
++L +HI+ M + + Q IP+ G +W+ +P EK+ D L N + + +
Sbjct: 1 MILYNHIAYKMCQHEMDMAQHIPE--GGNWKDIP-EKITD---NRLANIRDSGGRTT-YY 53
Query: 140 GRLDWEGNFPTSVTDPHPMGMVGTC-FHPNQDRIITVRECARSQGFSDSYKFVG 192
GRL W+ P+ + + C HP Q R+++ RE AR Q F D + FVG
Sbjct: 54 GRLRWDK--PSYTINTFFNRVPNGCNLHPEQMRVMSTREAARFQSFPDDFIFVG 105
>gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
Length = 361
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 67/164 (40%), Gaps = 37/164 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
ITVR IG+L ++ +G +K GD L H + + +
Sbjct: 206 ITVRQAIGNLRSLKSG-----------------------QKDPGDPL----HYASSHLPI 238
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L R Q IPK G+ + + P +L C N H ++GR+ W+ PT T
Sbjct: 239 ALKRLQHIPKDGGNRFSLPP-----ELELKCHKN----HKGHGDVYGRMRWDDVAPTLTT 289
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+ G HP DR IT+RE A Q F YKFVG I
Sbjct: 290 GCTDVTR-GRFSHPEDDRAITLREAAILQSFPLDYKFVGTKSQI 332
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLP------SEKVVDLIPWCLPNTAEKHNQ 134
+L +++ +S+L+L IP PG +W+ + S++++ + K
Sbjct: 589 ILINNMGFKLSDLDLEMISHIP--PGGNWQNISETTMKKSQRLMQI---------AKSGG 637
Query: 135 WKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
L+GR+++E T T + G GT HP +R+IT RE AR Q F D+Y F G+
Sbjct: 638 RTTLYGRINYEKPSYTITTYFNRPGN-GTYVHPKLERVITAREAARLQSFPDNYYFYGNK 696
Query: 195 QHIIGRL 201
+ ++ ++
Sbjct: 697 KDVLTQI 703
>gi|86151369|ref|ZP_01069584.1| modification methylase PspPI [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841716|gb|EAQ58963.1| modification methylase PspPI [Campylobacter jejuni subsp. jejuni
260.94]
Length = 155
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 63 YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIP 122
+K++ V +QK +RG L +H + S++ + + + IP + G ++
Sbjct: 17 FKAQSV--YQKLLRGKKLF--NHKATNHSQIAIDKLKLIPTESGKEF------------- 59
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
LP Q+K + RL W+ PT + G HP R IT RE AR Q
Sbjct: 60 --LPKKLHGRQQFKTTWSRLKWDEVSPT-IDTRFDTPSNGKNSHPFLHRSITPREAARIQ 116
Query: 183 GFSDSYKFVGDIQHIIGRL 201
FSD ++F+G I ++
Sbjct: 117 SFSDDFRFLGTKTEICKQI 135
>gi|402834973|ref|ZP_10883559.1| RNA cap guanine-N2 methyltransferase [Selenomonas sp. CM52]
gi|402276494|gb|EJU25602.1| RNA cap guanine-N2 methyltransferase [Selenomonas sp. CM52]
Length = 535
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL ++ + SV + + S + + + +RG +L +H+S A +
Sbjct: 363 TVRDAIGDLESITSSVSVDSDAIELPS---QDGLPELARTLRGKLLY--NHVSTATRDTA 417
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + + + G ++ DL P + ++ RL ++ T V
Sbjct: 418 LSRFKAL--REGQNFH--------DLDPKLKTTYSNAERTQNTIYMRLCYDEPCGTVVNV 467
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR +++RE AR Q F DS+ F G
Sbjct: 468 RKSMWI-----HPVLDRAVSIREAARLQTFPDSFIFEG 500
>gi|333379014|ref|ZP_08470741.1| hypothetical protein HMPREF9456_02336 [Dysgonomonas mossii DSM
22836]
gi|332885826|gb|EGK06072.1| hypothetical protein HMPREF9456_02336 [Dysgonomonas mossii DSM
22836]
Length = 346
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 57 VGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGS--DWRVLPS 114
+ + SP K PV+ K D +H + ++++NL R K K G+ W+ P
Sbjct: 193 IDYISPEKGFPVIPAGHKDVSDF----NHTTAGLNQINLKRLAKTDKDGGTRMGWKNDPE 248
Query: 115 EKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF-HPNQDRII 173
++ I K N +K ++GRL W+ P+S + F HP QDR I
Sbjct: 249 LQLACYIG--------KDNCFKDVYGRLSWKK--PSSTITTKFFNISNGRFAHPEQDRAI 298
Query: 174 TVRECARSQGFSDSYKF 190
++RE A Q F ++Y F
Sbjct: 299 SLREGATLQTFPENYIF 315
>gi|422620621|ref|ZP_16689298.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica
str. M301072]
gi|330900978|gb|EGH32397.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. japonica
str. M301072]
Length = 340
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 101 IPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGM 160
IPK GS LPSE + C NT N + ++GR+ W+ PT +T
Sbjct: 227 IPKNGGS-RHSLPSEMQLK----CHLNT----NGFNDVYGRMHWDQVAPT-ITSGCINPS 276
Query: 161 VGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
G HPN++R IT+RE A QGF SYKF D H
Sbjct: 277 KGRFLHPNENRPITLREAAILQGFPASYKF--DASH 310
>gi|340351631|ref|ZP_08674538.1| modification methylase HgiDII [Prevotella pallens ATCC 700821]
gi|339617510|gb|EGQ22134.1| modification methylase HgiDII [Prevotella pallens ATCC 700821]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TVRD IG LP +E G P S H + ++ L
Sbjct: 201 VTVRDAIGYLPP---------LEAGHCCPTDSL------------------HRCRELTPL 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N+ R + P G W+ P DL+ C K + ++GR+ W+ PT T
Sbjct: 234 NMERIKATPY--GGSWKDWPE----DLMLNCHKKNGGK--SFGSVYGRMVWDKPAPTMTT 285
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
+G G HP Q+R I+ RE A Q F ++Y F + Q +
Sbjct: 286 LCTGLGN-GRFGHPEQNRAISAREAALFQTFPNTYNFFPNEQDV 328
>gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 356
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H+S +SE N+ R + I K GS LP E LI C N + ++G +D
Sbjct: 225 NHVSNKLSEDNVKRIRYIRKNGGS-RSSLPEE----LILNCHKN----NRGHTDVYGIID 275
Query: 144 WEGNFPTSVTDPHPMGMVGTCF--------HPNQDRIITVRECARSQGFSDSYKFVGD 193
++ P + + G C HP QDR ++ RE AR Q F DSY F+G+
Sbjct: 276 --------ISKP-SVTITGGCMTYSKGRFGHPTQDRALSAREAARLQSFDDSYVFLGN 324
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ I+ D + DLP + N T E ++ P ++ +Q+ +R + + +HI+ S
Sbjct: 191 KMISTYDALHDLPVLENELGETIQE--YALPIQN----AYQELMRFNSSHVLNHIAANHS 244
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E + +P PG +++ LP E L N+ + W FP
Sbjct: 245 EKVKETIKLVP--PGKNYKALPEE---------LKNSRNFNVAWT----------RFPDH 283
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
P FH +R+ TVRECAR Q F D ++F+G+
Sbjct: 284 APSPTIDTGHRHHFHYYANRVPTVRECARLQSFPDRFEFIGN 325
>gi|452206972|ref|YP_007487094.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
gi|452083072|emb|CCQ36355.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
Length = 369
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 85 HISKAMSELNL--IRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
H ++++SE N+ IRC PG W+ P E +D + ++ ++GR+
Sbjct: 217 HTARSLSETNIKRIRC----SNPGGSWKDWPEELRLDC------HKKASGQTYEAVYGRM 266
Query: 143 DWEGNFPTSVTDPHPMGMVGTCFH--PNQDRIITVRECARSQGFSDSYKFVGDIQHI--- 197
+ PT T + +G G H +QDR +++RE A Q F + Y+F D++ +
Sbjct: 267 VADEPAPTITTQFYNLGS-GRFGHYDTDQDRALSLREGAMIQTFPEDYRFADDLEEVEII 325
Query: 198 -IGRL 201
+GRL
Sbjct: 326 KVGRL 330
>gi|434403782|ref|YP_007146667.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428258037|gb|AFZ23987.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 391
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+++S + + L +R K G +WR LP DL + + G + RL
Sbjct: 247 EYLSYSENRLKYLRLLKA----GQNWRYLPD----DLKQEAMGGAYKSGGGKVGFYRRLS 298
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
W+ PT T PH C HP + R +++REC + Q F D++ F G
Sbjct: 299 WDKPSPTITTSPH-QKATDMC-HPEELRPLSIRECLQIQTFPDNWVFHG 345
>gi|379754157|ref|YP_005342829.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804373|gb|AFC48508.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 669
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLN-----DHISK 88
+TV + IGDLP V G + G++ S PV FQ+++R + + + DHI++
Sbjct: 245 VTVWNAIGDLPEVEGGWRPEGGQHGWAD--YSGPVTQFQREMRAGVALADSHKVFDHITR 302
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-----LFGRLD 143
+ + + + + + K DL +E+H +++G + RL+
Sbjct: 303 PVRDDDREAFESMTH----------ATKYTDL--------SEQHQRYRGDIFDDKYNRLN 344
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
E + ++T H HP Q R +TVRE AR Q F D ++F G
Sbjct: 345 -ENDLSRTIT-AHIAKDGYWYIHPRQSRTLTVREAARLQTFPDDFRFDG 391
>gi|260904526|ref|ZP_05912848.1| DNA-cytosine methyltransferase [Brevibacterium linens BL2]
Length = 319
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEV--GFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+TV T D+P + NG + + GF PY+S + H+ + +
Sbjct: 130 VTVGSTFSDIPGLVNGIHLPQRKTPDGFDGPYESHEL----------------HLGRTYT 173
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+L+L R IP P + +P E L+ C T + + GR+D E T
Sbjct: 174 DLSLKRFASIP--PKGNRFHIPDE----LLSPCWRRT---RTGYSDVMGRMDNESPSVTI 224
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T+ G HP +R IT E AR QGF D +K++G I
Sbjct: 225 RTE-FDKPEKGRYLHPTANRAITHFEAARLQGFPDDFKWLGSKPRI 269
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML----VLN--DHIS 87
++V D I DLP + G + T S+PY+ + GD+L V N +H+
Sbjct: 190 VSVADAIFDLPELSAGEAATEYTKPPSTPYQK------LMHLPGDVLQGHSVSNHPEHLV 243
Query: 88 KAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGN 147
KA+S +P IP L A HN + L W
Sbjct: 244 KAIS-------------------YIPDGGNRTAIPPKLQPRAGFHNSYSRL---ASWRPA 281
Query: 148 FPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+ P G C HP QDR +T RE AR Q F D ++F+G +
Sbjct: 282 VAITQNLGKPSGT--RCIHPTQDRGLTTREGARLQSFPDRFQFLGGV 326
>gi|380301051|ref|ZP_09850744.1| DNA-cytosine methyltransferase [Brachybacterium squillarum M-6-3]
Length = 366
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLD 143
H+++ S+L+ R IP G + LP + + + W H G + GRL
Sbjct: 237 HVTRTYSDLSRRRFAAIPF--GGNRFDLPDDLLCEA--W------RHHPSGSGDVMGRLR 286
Query: 144 WEGNFP-----TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHII 198
W N P T T P G HP QDR I+ E AR QGF D Y+FVG I I+
Sbjct: 287 W--NQPSVTIRTEFTKPE----KGRYLHPVQDRSISPHEGARIQGFPDDYRFVGPITQIV 340
Query: 199 GRL 201
++
Sbjct: 341 KQI 343
>gi|386038182|ref|YP_005961058.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus polymyxa M1]
gi|343098143|emb|CCC86351.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus polymyxa M1]
Length = 437
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
+ +P+ Q ++ RL+W+ SVT +P HP +DRI++VRECAR
Sbjct: 328 FSIPDNIRPKGQHSDMYKRLEWD---KPSVTIVNPRK--SCILHPEEDRILSVRECARLF 382
Query: 183 GFSDSYKFVGDIQHI 197
SD+++F G + +
Sbjct: 383 DVSDNFEFKGKLSSM 397
>gi|254416815|ref|ZP_05030564.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176361|gb|EDX71376.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 391
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +L + + G + RL W+ PT T P C
Sbjct: 263 GQNWRYLPE----NLKEEAMGGAYKSGGGKVGFYRRLSWDKPSPTVTTSPQ-QKATDMC- 316
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +T+RECAR Q F D + F G I
Sbjct: 317 HPVELRPLTMRECARIQTFPDDWIFCGSI 345
>gi|332664528|ref|YP_004447316.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333342|gb|AEE50443.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 420
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 36 VRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNL 95
V D + DLP + G + K+ L F +R + VL H+++ SE +
Sbjct: 234 VADLLNDLPIIKAGQGIDRF---LKYRTKTSEYLEFHS-LRNGIDVLTQHVARPHSEQD- 288
Query: 96 IRCQKIPKQPGSDWRVLPSEKVVDLIPWC-LPNTAEKHNQWKGLFGRLDW-EGNFPTSVT 153
++I K W EK + + + LP + H + R N P S T
Sbjct: 289 ---KEIYKIAVQKW-----EKEQERLNYNDLPERLKTHQNRTSFYDRFKVVAANLPYSQT 340
Query: 154 DPHPMGMVGTCF-HPN--QDRIITVRECARSQGFSDSYKFVGD 193
+ G F HP+ Q+R ITVRE AR Q F D Y F G+
Sbjct: 341 VVAHIAKDGHYFIHPDIEQNRSITVREAARLQSFPDDYYFEGE 383
>gi|124486003|ref|YP_001030619.1| hypothetical protein Mlab_1183 [Methanocorpusculum labreanum Z]
gi|124363544|gb|ABN07352.1| DNA-cytosine methyltransferase [Methanocorpusculum labreanum Z]
Length = 352
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H + +++ NL R + P G D R SE V+D +T ++GR+
Sbjct: 223 NHSAACLNDKNLTRIRATP-HDGGDRRAWSSELVLDCHKGKTGHT--------DVYGRMA 273
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
W+ PT + + G HP QDR I++RE A Q F D Y F G+
Sbjct: 274 WDDVAPTLTSRCASLSN-GRYGHPEQDRAISLREAAALQTFPDDYIFYGN 322
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+AI++ ++I DLP +G G E + P + E +QK R ++ +H S+ S
Sbjct: 188 KAISLWESISDLPKIGIGEKKGIFE--YDKPAECE----YQKWARLGSNIIKNHTSQNHS 241
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+ L + + +P GS V ++ + + +C G + R + S
Sbjct: 242 QRVLEKIKSVPM--GSGMEVFVNKYQENKVVYC------------GGYRRAVKD---EPS 284
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T GM T HP + R ++ RECAR Q F DS+ F G
Sbjct: 285 YTAYWTRGM--TSIHPEEHRFLSPRECARIQSFPDSFIFQG 323
>gi|169834659|ref|YP_001693426.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str.
Okra]
gi|169123207|gb|ACA47042.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum B1 str.
Okra]
Length = 490
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
+ RLD N P SVT +P V HP +DRII+VRECAR QG D + F G++
Sbjct: 405 YVRLDL--NRP-SVTIVNPRKSV--ILHPTEDRIISVRECARLQGIDDDFIFYGNL 455
>gi|161528981|ref|YP_001582807.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1]
gi|160340282|gb|ABX13369.1| DNA-cytosine methyltransferase [Nitrosopumilus maritimus SCM1]
Length = 360
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 30 PFRAITVRDTIGDLPAVGNGAS---VTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI 86
P + D I LP++ G S + F+SPY KK+ G++ L +H
Sbjct: 184 PVSCDNLFDVISGLPSIKQGTSGNEIMKHPKKFNSPY--------GKKLGGNINNLYNHW 235
Query: 87 SKAMSE--LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
E +N I + W+ L + K++ ++ RL +
Sbjct: 236 CTKHGEDVINTISEINEGRSLLDSWKTLSKKTKSRF--------KNKNSLHGNIYRRLSY 287
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ PT V M HP ++RII+VRE AR Q F DS++F G
Sbjct: 288 QHTTPTIVHARRAM-----LLHPKENRIISVREAARIQSFPDSFRFFG 330
>gi|378715722|ref|YP_005280611.1| DNA (cytosine-5-)-methyltransferase [Gordonia polyisoprenivorans
VH2]
gi|375750425|gb|AFA71245.1| DNA (cytosine-5-)-methyltransferase [Gordonia polyisoprenivorans
VH2]
Length = 375
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLD 143
H + ++L+L R + I GS SE L C N HN+ G + GRL
Sbjct: 244 HFGRNYTQLSLDRFKAISLNGGSR-----SELPDHLKAQCWRN----HNKGTGDVMGRLT 294
Query: 144 WEGNFPTSVTD---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
WE T T+ P G HP+QDR+IT E A QGF D Y++VG + I
Sbjct: 295 WEKPSVTIRTEFFKPEK----GRYIHPDQDRVITHYEAALIQGFPDDYRWVGTREEI 347
>gi|347533695|ref|YP_004841703.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345505091|gb|AEN99771.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 438
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKH--NQWKGLFGRLDWEGNFPTSVTDPHPMGMVGT 163
G W+ +P +K+ + + N H N ++ F R + G + T P G+V
Sbjct: 306 GKSWKAVPYDKLPERLKKIRNNMKRYHSPNMYRR-FARNEINGTITAAAT-PEHSGIV-- 361
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKFVGD 193
HP ++R +VRE AR Q F D Y FVGD
Sbjct: 362 --HPTENRRYSVREIARIQSFPDDYVFVGD 389
>gi|407013414|gb|EKE27564.1| hypothetical protein ACD_3C00192G0009 [uncultured bacterium (gcode
4)]
Length = 360
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 67/164 (40%), Gaps = 42/164 (25%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
IT+R+ I LP++ G E+ S PY H ++ MS L
Sbjct: 198 ITLREAIWHLPSIWIG------EIHPSDPY---------------------HRAQEMSNL 230
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK----GLFGRLDWEGNFP 149
N R + IPK +W L LIP C K WK ++ R+ W+ P
Sbjct: 231 NKERIKYIPK----NWWNLKWAPDY-LIPEC-----HKKASWKTYSSSVYARMKWDEPSP 280
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T T + +HP QDR I++RE A Q F Y+FV D
Sbjct: 281 TLTTQCLWIWN-WRYWHPEQDRAISLREAAMIQTFPQDYEFVED 323
>gi|300868191|ref|ZP_07112823.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
gi|300333815|emb|CBN58007.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
Length = 395
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 13/192 (6%)
Query: 4 FTGPELKVKLA--RNSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSS 61
G ++V LA + Y V N A + VR+ + + G+ + + S
Sbjct: 168 MAGAAMQVILAEIKRIGYEVVYDLLNAADYGVPQVRERVIFIGYKGSDSVTLPLPTHSQS 227
Query: 62 PYKSEPV-LWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDL 120
P + + ++G + ++I + + L +R K G +W+ LP+E L
Sbjct: 228 GVSRLPKWITLKDGLKGLIDPQPEYIPYSEARLKYLRLLKA----GENWKNLPNE----L 279
Query: 121 IPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECAR 180
+ + G + RL W+ PT T PH C HP++ R ++VRE AR
Sbjct: 280 KQEAMGGAYKSEGGKVGFYRRLTWDKPSPTVTTSPH-QKATDMC-HPDELRPLSVRESAR 337
Query: 181 SQGFSDSYKFVG 192
Q F D + F G
Sbjct: 338 IQTFPDDWVFYG 349
>gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 671
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML-----VLNDHI 86
+ + V + IGDLP V G G++ + PV +Q+ +R +L L DHI
Sbjct: 239 QTVNVWNAIGDLPEVEGGWRPAGGADGWAD--YAGPVTEYQRLMRQGILGAESARLYDHI 296
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEK------HNQWKGLFG 140
++ + E + I + + D SE LP +A++ H+++K
Sbjct: 297 TRPVREDDAIAFEHM------DHETRYSE---------LPESAQRYRTDIFHDKYK---- 337
Query: 141 RLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
RLD E +F ++T H HP Q R IT+RE AR Q F D ++F G
Sbjct: 338 RLD-ENHFSRTIT-AHIAKDGYWYIHPRQGRTITIREAARLQSFPDWFRFAG 387
>gi|153870382|ref|ZP_01999795.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152073154|gb|EDN70207.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 349
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 29 APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
P +TV+D IG L + +G +S P +F H +
Sbjct: 179 TPENYLTVQDAIGQLDKIKSG--------------ESSPNDFF-------------HKAS 211
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
+S+ NL R ++ PG W+ + DL C + + K + ++GR+ W+
Sbjct: 212 KLSDKNLQRIRQ--SIPGGSWKRDWDD---DLKLAC--HKSNKGQTYVSIYGRMKWDEPS 264
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
PT T +G G HP QDR I++RE A Q F Y+FV
Sbjct: 265 PTMTTFCTGIGN-GRFGHPEQDRAISLREAALLQSFPRDYQFV 306
>gi|453054457|gb|EMF01909.1| DNA-cytosine methyltransferase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 655
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 25/164 (15%)
Query: 35 TVRDTIGDLP--AVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
T+R IGDLP V V E+ + +P + + + R V+ DH+++ +
Sbjct: 240 TLRHAIGDLPPLTVVPTERVGEREMAYGTPSEDLSDFAREMRKRAKREVVFDHMTRRVRP 299
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEK----VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
DW + S D+ P +AE + + +LDW+ +
Sbjct: 300 --------------DDWVIFDSMDSDTLYSDIDPELQRYSAE---HFTDKYKKLDWD-DL 341
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
S+T H HP+Q+R +TVRE AR Q F D ++F G
Sbjct: 342 SRSIT-AHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 384
>gi|403237147|ref|ZP_10915733.1| type II restriction-modification system methylation subunit
[Bacillus sp. 10403023]
Length = 587
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHISKA 89
R TVRD I DL + SV ++ ++ + Q+ R M ++ +HI+
Sbjct: 398 RDFTVRDAISDLENINAAKSVEDNKLAYTG---DNNMTGMQEYYRSGMQENIIYNHINTD 454
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
L+ R + I K G ++ L +E + I + A+ ++ RL ++ P
Sbjct: 455 SEPLSKQRFEAIKKSGGKNFHSLSTE--LQEISY-----ADASRTQNTIYLRLGYDLPSP 507
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T + M HP + +++RE AR Q F D+Y F G
Sbjct: 508 TVINVRKSMWQ-----HPTKAVALSIREAARLQSFKDNYVFKG 545
>gi|357400512|ref|YP_004912437.1| DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766921|emb|CCB75632.1| putative DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 566
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 25/164 (15%)
Query: 35 TVRDTIGDLP--AVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
T+R IGDLP V V E+ + +P + + + R V+ DH+++ +
Sbjct: 151 TLRHAIGDLPPLTVVPTERVGEREMAYGTPSEDLSDFAREMRKRAKREVVFDHMTRRVRP 210
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEK----VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
DW + S D+ P +AE + + +LDW+ +
Sbjct: 211 --------------DDWVIFDSMDSDTLYSDIDPELQRYSAE---HFTDKYKKLDWD-DL 252
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
S+T H HP+Q+R +TVRE AR Q F D ++F G
Sbjct: 253 SRSIT-AHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 295
>gi|392331194|ref|ZP_10275809.1| DNA-cytosine methyltransferase [Streptococcus canis FSL Z3-227]
gi|391418873|gb|EIQ81685.1| DNA-cytosine methyltransferase [Streptococcus canis FSL Z3-227]
Length = 411
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGD-MLVLNDHISKAMSE 92
I+VR + DLP + G + Y+ P + +K R + ++L ++++ E
Sbjct: 235 ISVRTALSDLPQLSQGQE--------KNQYQHNPNDYVRKHFRKNPSILLTQNVARPHRE 286
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
++L +++ R+ +E LI T + +++ F LDW N P
Sbjct: 287 IDLKIYKEVALARSKGKRLKYNELDRSLI------THKHTDKFLDRFKALDW--NQPAHT 338
Query: 153 TDPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKF 190
H HP+ Q+R ITVRE AR QGF D + F
Sbjct: 339 VVAHIAKDGHHYIHPDIKQNRSITVREAARLQGFPDDFYF 378
>gi|386356566|ref|YP_006054812.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365807074|gb|AEW95290.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 611
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 25/164 (15%)
Query: 35 TVRDTIGDLP--AVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
T+R IGDLP V V E+ + +P + + + R V+ DH+++ +
Sbjct: 196 TLRHAIGDLPPLTVVPTERVGEREMAYGTPSEDLSDFAREMRKRAKREVVFDHMTRRVRP 255
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEK----VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
DW + S D+ P +AE + + +LDW+ +
Sbjct: 256 --------------DDWVIFDSMDSDTLYSDIDPELQRYSAE---HFTDKYKKLDWD-DL 297
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
S+T H HP+Q+R +TVRE AR Q F D ++F G
Sbjct: 298 SRSIT-AHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 340
>gi|261368869|ref|ZP_05981752.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM
15176]
gi|282568964|gb|EFB74499.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum variabile DSM
15176]
Length = 565
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV+D IGDL + ++ + G P K+E + +R D VL++HI ++
Sbjct: 360 TVKDAIGDLEDIKPVYTLAEDKQGIVLP-KAENLSELASTLR-DSPVLHNHIVTKTTDTA 417
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + + +PG ++ L + T K Q ++ RL ++ T V
Sbjct: 418 LERFRAL--KPGQNFHCLDDSLKTNTY------TDAKRTQ-NTIYQRLKYDEPSGTVVNV 468
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR I++RE AR Q F DS+ F G
Sbjct: 469 RKSMWI-----HPEHDRAISIREAARLQTFPDSFVFYG 501
>gi|443313327|ref|ZP_21042939.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776732|gb|ELR87013.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 413
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 26/176 (14%)
Query: 22 VRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLV 81
+ S N F ++++ D I DLP S+ E Y S P +Q IR V
Sbjct: 202 LSSLENTGLFPSLSLWDAISDLP------SLNAREGKEEQSYISLPQNIYQNWIRNSSQV 255
Query: 82 LNDHISKAMSELNLIRCQKIP-KQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFG 140
L +H++ S+ + R ++I + SD +P N + + G
Sbjct: 256 LYNHVAMEHSQRVVERFKQIKWGESSSD------------VP---KNYSARRRSGNGELS 300
Query: 141 RLDWEGN----FPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ ++ N P + HP QDR +T RE AR Q F D Y+F+G
Sbjct: 301 MISYDQNNRRLHPYKPSHTIAASFYANFVHPFQDRNLTAREGARIQSFPDKYRFLG 356
>gi|147866971|emb|CAN83056.1| hypothetical protein VITISV_036167 [Vitis vinifera]
Length = 1076
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 2 HVFTGPELKVKLARNSHYAAVRSTANGAPFRAITVRD 38
HVF PELK+ L+ YAA + A G PFRAIT RD
Sbjct: 953 HVFXXPELKITLSEIIQYAAFXNIATGVPFRAITARD 989
>gi|357490119|ref|XP_003615347.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516682|gb|AES98305.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 192
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 139 FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
F R+ W+ PT VT P HP QDR++++R AR QGF D YK G
Sbjct: 76 FARIWWDKTVPTVVTRAEPHNQ--KILHPEQDRVLSIRGNARLQGFPDFYKLCG 127
>gi|425442866|ref|ZP_18823102.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9717]
gi|389715978|emb|CCH99730.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9717]
Length = 412
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|300957407|ref|ZP_07169621.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
gi|300315842|gb|EFJ65626.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 175-1]
Length = 343
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S LN+ R + +PG DW P + L C + E +K ++GR+ W
Sbjct: 209 HKCSTLSPLNMERIKA--SKPGGDWHDWP----IHLRAPC--HLKESGKFYKSVYGRMSW 260
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
PT T + G G HP Q+R I++RE A Q F Y F
Sbjct: 261 NEPSPTITTQCYGFGN-GRFGHPEQNRAISLREAAILQSFPKDYLF 305
>gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 342
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 54/170 (31%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
A TVR IGDLPA+ +G V ++ +DH + +S+
Sbjct: 192 ARTVRQVIGDLPAIADG-DVHPLD--------------------------DDHAAMRLSD 224
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSV 152
+N +R Q P+ G D R D + + H +GR+ W
Sbjct: 225 VNRLRIQATPE--GGDRR--------DWDEALVSECHKVHGGHTDAYGRMWW-------- 266
Query: 153 TDPHPMGMVGTCF--------HPNQDRIITVRECARSQGFSDSYKFVGDI 194
D G+ C HP+QDR I++RE A Q FS ++F G +
Sbjct: 267 -DRPATGLTTRCLSYSNGRFGHPDQDRAISLREAASIQTFSRRFRFEGSL 315
>gi|425451385|ref|ZP_18831207.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 7941]
gi|389767369|emb|CCI07230.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 7941]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|425436512|ref|ZP_18816948.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9432]
gi|425446714|ref|ZP_18826715.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9443]
gi|389678748|emb|CCH92417.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9432]
gi|389732936|emb|CCI03215.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9443]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|443648361|ref|ZP_21129981.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335207|gb|ELS49684.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|425467447|ref|ZP_18846730.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9809]
gi|389829771|emb|CCI28632.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9809]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|422302441|ref|ZP_16389804.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
gi|389788313|emb|CCI16067.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|448504090|ref|ZP_21613717.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445691180|gb|ELZ43372.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 403
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 60/153 (39%), Gaps = 24/153 (15%)
Query: 40 IGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQ 99
IGDLP V G T Y +EP Q +RGD L H + +E +
Sbjct: 200 IGDLPEVSPGEEKTE--------YDAEPATVIQDDLRGDNTELTHHQAANHTEDMVEMIS 251
Query: 100 KIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
I G + +P E L ++ HN + RLD + ++T
Sbjct: 252 HISD--GGNRTEIPDE---------LQPSSGYHNSYS----RLDSQ-EPAVAITSNMSKP 295
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP Q R +T RE AR Q F D Y+F G
Sbjct: 296 SSARCIHPFQHRGLTPREGARLQTFPDWYRFDG 328
>gi|448664777|ref|ZP_21684415.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445774364|gb|EMA25385.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 363
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++ +SE NL R + +PG WR P E LI C + + ++ ++GR+
Sbjct: 217 HSARELSETNLKRIRN--SEPGGSWRDWPEE----LILECHKKVSGQ--SYESVYGRMVA 268
Query: 145 EGNFPTSVTDPHPMGMVGTCFH--PNQDRIITVRECARSQGFSDSYKFVGDIQHI----I 198
+ PT T + +G G H +QDR +++RE A Q F + Y F D + + I
Sbjct: 269 DEPAPTITTQFYNLGS-GRFGHYDTDQDRALSLREGAMLQTFPEDYSFAEDPKEVGITKI 327
Query: 199 GRL 201
GRL
Sbjct: 328 GRL 330
>gi|425471048|ref|ZP_18849908.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9701]
gi|389883163|emb|CCI36438.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9701]
Length = 412
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP +D+ + N+ + H G RL W+ P P
Sbjct: 280 GGNWRNLP----MDIQKEYMKNSLKNHGGRTGYAKRLSWDE--PALTITCSPAQTQTERC 333
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +TVRE AR Q F D ++F G++
Sbjct: 334 HPQETRPLTVREYARVQSFPDDWQFTGNL 362
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 31 FRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAM 90
F +T+ D I +LP + T +P EP ++K++ + + N HI +
Sbjct: 202 FDNVTLADAISNLP-------LPTENGIIDAP---EPKTNYEKELFKEGKIYN-HIKRHH 250
Query: 91 SELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
S+ L R KI + G +++ L N H+ G +GR+ W+ PT
Sbjct: 251 SKKVLERLSKI--KTGDNFKSLNE------------NIKSIHS---GSYGRMSWDE--PT 291
Query: 151 -SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
++T G P+QDR +T RE AR Q F D Y+F G+
Sbjct: 292 MTITTRFDTPSGGRFTLPDQDRTLTAREAARVQSFPDDYRFYGN 335
>gi|402571788|ref|YP_006621131.1| DNA-methyltransferase Dcm [Desulfosporosinus meridiei DSM 13257]
gi|402252985|gb|AFQ43260.1| DNA-methyltransferase Dcm [Desulfosporosinus meridiei DSM 13257]
Length = 380
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP E ++ + + G + RLD++ PT VT P +
Sbjct: 251 GGNWRNLPPE----VVRTAMGGAFKSGGGNAGFYRRLDYDQPSPTLVTSP--VQKATMLC 304
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP QDR ++V+E AR Q F D+++ G +
Sbjct: 305 HPTQDRALSVKEYARIQQFPDNWRIEGRL 333
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLHPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q FSD+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFSDNYKFCG 317
>gi|429245806|ref|ZP_19209176.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum
CFSAN001628]
gi|428757188|gb|EKX79690.1| C-5 cytosine-specific DNA methylase [Clostridium botulinum
CFSAN001628]
Length = 317
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
+P+ + + RLD N P SVT +P V HP +DRII+VRECAR QG
Sbjct: 218 IPDQLRPRSTHSNSYVRLDL--NRP-SVTIVNPRKSV--ILHPTEDRIISVRECARLQGI 272
Query: 185 SDSYKFVGDI 194
D + F G++
Sbjct: 273 DDDFIFYGNL 282
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI--- 86
P + V I DLPAV E G + Y ++PV +Q+ +R + +HI
Sbjct: 198 PNKYRDVYSAISDLPAV----YPRQHEEGDTFEYDNQPVNNYQRLMRKGSANIYNHIPMR 253
Query: 87 --SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
+ + + +IR Q I P + L S D ++ H +
Sbjct: 254 HTDRTIEKFKMIRTQGIDSLPEN----LRSRTRGDSSKISNKTYSQNHRRIN-------- 301
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
PT + + HP QDR +TVRE AR Q F D+Y F G
Sbjct: 302 ----PTKPSPTITASFYSSFIHPYQDRNLTVREAARIQSFPDNYIFYG 345
>gi|405755175|ref|YP_006678639.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes
SLCC2540]
gi|404224375|emb|CBY75737.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes
SLCC2540]
Length = 516
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
KG+ RLD PT VT P HP +RI+TVRE AR Q F DS++F+G
Sbjct: 424 KGIRTRLDSNNISPTVVTLPDD------YIHPYFNRILTVREMARLQSFDDSFEFLG 474
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 64 KSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPW 123
+S+P +Q +R + +H K +++ R +P+ G +WR +P E
Sbjct: 216 QSKPASPYQNYLRNTENKIMNHEIKYPADIQQQRISHVPQ--GGNWRDIPEE-------- 265
Query: 124 CLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQG 183
PN ++ N+ + RL+ E T T T FH RI TVRE AR Q
Sbjct: 266 LFPN--QRKNRHSSAYKRLNEEDVSVTIDTGNAHSNYFHTIFH----RIPTVREAARLQS 319
Query: 184 FSDSYKFVG 192
F DS+ F G
Sbjct: 320 FKDSFVFSG 328
>gi|385860080|ref|YP_005906590.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis Ohio2]
gi|334193781|gb|AEG73509.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis Ohio2]
Length = 340
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 57 VGFSSPYKSEPVLWFQKKIRGDML---VLND---HISKAMSELNLIRCQKIPKQPGSDWR 110
+G S ++ + + KK R + VLND + + SE +P PG WR
Sbjct: 173 IGIRSDFREKISFKYPKKHRYKPVLSDVLNDVPESLGASYSEKKKKVFSMVP--PGGYWR 230
Query: 111 VLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQD 170
+P E ++ + C K G+ RL + T +T P M C HP +
Sbjct: 231 DIPEEVAMEYMKTCYHMKGGK----TGILRRLSLKEPSLTVLTSPQ-MKQTDRC-HPVEV 284
Query: 171 RIITVRECARSQGFSDSYKFVGDI 194
R TVRE AR Q F D ++FVG +
Sbjct: 285 RPFTVRENARIQSFPDEWEFVGSM 308
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSE 92
A+TVRD I DLP T + + P K+E +Q+ +RG+ L H +K M
Sbjct: 208 ALTVRDAISDLPDEVLVPRDTQKPMEYPEPPKTE----YQRLMRGNSTELTHHSAKRMLG 263
Query: 93 LNLIRCQKIPKQPGSDWRVLPSEKVVD------LIPW------------CLPNTAEKHNQ 134
+ +R + PG D+ E++ D LI C EK
Sbjct: 264 IRRLRLAML--HPG-DYGTKIEERLADGGLNDELIDLMMGGAGMRDAAECRTQDREKEAA 320
Query: 135 WKGL-----------------------FGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDR 171
+ + + RL W+ P+ H HP DR
Sbjct: 321 LREVLKGGHTTPAKVMEFLDSQGFANKYRRLRWDA--PSHTVVAHMARDCSDFVHPGIDR 378
Query: 172 IITVRECARSQGFSDSYKFVG 192
++VRE AR Q F D+Y+F G
Sbjct: 379 FVSVREAARFQSFPDTYRFPG 399
>gi|320109274|ref|YP_004184864.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
gi|319927795|gb|ADV84870.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
Length = 409
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP E L + ++ G + RL W+ PT VT P+ M C
Sbjct: 255 GENWRSLPPE----LQAAAMGDSYHSGGGKTGFYRRLSWDKPSPTLVTRPN-MKATDLC- 308
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R ++V E A Q F SY+F G +
Sbjct: 309 HPTELRPLSVEEYAAIQTFPPSYRFAGRL 337
>gi|422854885|ref|ZP_16901549.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
Length = 358
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H++ +S+LN+ R I + G + LP V++ C N + K ++G LD
Sbjct: 226 NHVANKLSDLNIERIIHI-RNNGGNRSSLPESLVLN----CHKNIS----GHKDVYGILD 276
Query: 144 WEGNFPTSVTDPHPMGMVGTCF--------HPNQDRIITVRECARSQGFSDSYKFVGD 193
+T P + + G C HP Q+R ++ RE AR Q F D Y FVG+
Sbjct: 277 --------ITKP-SITITGGCMTYSKGRFGHPTQNRALSAREAARLQSFDDDYIFVGN 325
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 25/164 (15%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVG-----FSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
T+ IGDLP + V T VG + +P + + + + R V+ DH+++
Sbjct: 240 TLSHAIGDLPPL---KVVPTERVGERVRSYDTPSEDQSEFAKEMRKRAKREVVFDHMTRR 296
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAE-KHNQWKGLFGRLDWEGNF 148
+ + DW + S L P + + +LDW +
Sbjct: 297 VRQ--------------DDWEIFQSMDSDTLYSEIAPELQRYSAEHFTDKYKKLDW-NDL 341
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
S+T H HP+Q+R +TVRE AR Q F D ++F G
Sbjct: 342 SRSIT-AHIAKDGYWYIHPDQNRTLTVREAARIQTFPDRFRFAG 384
>gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
Length = 527
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLW-FQKKIRGDMLVLNDHISKAMSEL 93
TV D I DL + G E+ PY S+ +L + +R + +HI+ SEL
Sbjct: 358 TVEDAIMDLVSYEAGYEKDYKEI----PYNSDDILSDYANMMRQGSGTVKNHITTKTSEL 413
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLDWEGNFPTSV 152
L R + I +PG ++ L + NT K + + ++ RL T V
Sbjct: 414 ALKRFEAI--KPGQNFHSLSEN---------MKNTYTKPERTQNTIYLRLKLNEPSGTVV 462
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP +R +TVRE AR Q F D + FVG
Sbjct: 463 NVRKSMWI-----HPILNRGLTVREAARLQSFPDKFGFVG 497
>gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
Length = 369
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 61/161 (37%), Gaps = 36/161 (22%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P + V D I LP +G G + K++P+ H S
Sbjct: 206 PDNYLNVADVISHLPKIGAGDTC-----------KNDPL----------------HKSSV 238
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+S +N+ R + PG W P E L C K + ++GR+ W P
Sbjct: 239 LSPINIKRIKA--SVPGGSWMDWPEE----LRASCHKKDTGK--TYISVYGRMSWNTPAP 290
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
T T + G G HP QDR I++RE A Q F Y F
Sbjct: 291 TITTQCNGFGN-GRFGHPEQDRAISLREAAILQSFPADYHF 330
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 29 APFRAITVRDTIGDLPAVG---------NGASVTTMEVGFSSPY-KSEPVLWFQKKIRGD 78
AP I + D I DL +G + S VG S P +Q++++
Sbjct: 551 APHWPINIGDCISDLSLIGVENPHEETKHSTSKNKKNVGSGKQICASTPRSEYQRRVQNS 610
Query: 79 MLV--LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN--- 133
L++H++ +S + R + +P + G+D+R + + + + L + N
Sbjct: 611 DSCQPLHNHVTGRISVIQNERVRTVPLEAGADYRRMDEKLMTKAMREVLEEMGKNKNYQN 670
Query: 134 -QWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
+ +G +GRL + F T + HP R+ T+RE AR GF DS+
Sbjct: 671 KKLEGRYGRLSADDLFKIFTTTRDKWTL-----HPYLPRVFTIRELARGMGFPDSF 721
>gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
Length = 354
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG---LFGR 141
H S ++ELNL R + P+ G D R P+ +LI C H + G +GR
Sbjct: 216 HRSAILTELNLERIKNTPE--GGDRRDWPT----NLINTC-------HKDYTGHTDTYGR 262
Query: 142 LDWEGNFPTSVT--DPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKFVGDIQHI 197
+ W+ PT T + + G G HP+ Q+R I++RE +R Q F Y F G +
Sbjct: 263 MSWDKPAPTLTTKCNSYSNGRFG---HPDITQNRAISIREASRLQTFPKKYIFKGSFNSM 319
Query: 198 IGRL 201
++
Sbjct: 320 AKQI 323
>gi|429219292|ref|YP_007180936.1| DNA-methyltransferase Dcm [Deinococcus peraridilitoris DSM 19664]
gi|429130155|gb|AFZ67170.1| DNA-methyltransferase Dcm [Deinococcus peraridilitoris DSM 19664]
Length = 367
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + ++E NL R + +P WR V D C + K + ++GR+ W
Sbjct: 226 HWAAGLTERNLQRIRA--SRPDGTWRDWDETLVAD----CHRKSTGK--SFPSVYGRMSW 277
Query: 145 EGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
+ PT T + G G HP QDR I++RE A Q F +Y+FV
Sbjct: 278 DRPSPTITTQFYGFGN-GRFGHPEQDRAISLREGALLQTFPRTYQFV 323
>gi|420448489|ref|ZP_14947369.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp H-44]
gi|393065843|gb|EJB66671.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp H-44]
Length = 138
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 38 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 96
Query: 185 SDSYKFVGDI 194
D+YKF G +
Sbjct: 97 PDNYKFYGSV 106
>gi|333373863|ref|ZP_08465759.1| DNA-cytosine methyltransferase [Desmospora sp. 8437]
gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437]
Length = 379
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 83 NDHISKAMSELNLIRCQKIPKQPGSDW---RVLPSEKVVDLIPWCLPNTAEKHNQWKGLF 139
N H + +E +L+R + IP++ + + RV P +L P C K + LF
Sbjct: 227 NLHFGRKPTEKSLMRYKAIPEEGMNRFDLQRVAP-----ELTPQCW---IRKKSGGTDLF 278
Query: 140 GRLDWEG---NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
GRL W+ T P G HP Q R IT RE AR Q F D ++F+G
Sbjct: 279 GRLWWDRPAFTIRTEFFKPEK----GRYLHPEQHRPITHREAARFQSFPDHFEFIG 330
>gi|321310707|ref|YP_004193036.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
gi|319802551|emb|CBY93197.1| C-5 cytosine-specific DNA methylase [Mycoplasma haemofelis str.
Langford 1]
Length = 340
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 57 VGFSSPYKSEPVLWFQKKIRGDML---VLND---HISKAMSELNLIRCQKIPKQPGSDWR 110
+G S ++ + + KK R + VLND + + SE +P PG WR
Sbjct: 173 IGIRSDFREKISFKYPKKHRYKPVLSDVLNDVPESLGASYSENKKKVFSMVP--PGGYWR 230
Query: 111 VLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQD 170
+P E ++ + C K G+ RL + T +T P M C HP +
Sbjct: 231 DIPEEVAMEYMKTCYHMKGGK----TGILRRLSLKEPSLTVLTSPQ-MKQTDRC-HPVEV 284
Query: 171 RIITVRECARSQGFSDSYKFVGDI 194
R TVRE AR Q F D ++FVG +
Sbjct: 285 RPFTVRENARIQSFPDEWEFVGSM 308
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ ++ K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQMLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R ++VRE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|339626393|ref|YP_004718036.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
gi|379005855|ref|YP_005255306.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM
10332]
gi|339284182|gb|AEJ38293.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
gi|361052117|gb|AEW03634.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM
10332]
Length = 371
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 65/165 (39%), Gaps = 40/165 (24%)
Query: 26 ANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDH 85
A A ITVR+TIG LP G+ GD L+D
Sbjct: 193 AEAAETPEITVRETIGMLPEPGDS---------------------------GD--PLHDL 223
Query: 86 ISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWE 145
K + I Q IP GS LP + +D + N +K ++GR+ W+
Sbjct: 224 PEKRSERVRRI-IQTIPLDGGSRAE-LPEDLTLD--------CHRRGNGFKDVYGRMAWD 273
Query: 146 GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
PT +T G HP+Q R IT+RE A QGF Y+F
Sbjct: 274 AVAPT-ITGGCVNPSKGRFLHPSQHRTITLREAALLQGFPRDYRF 317
>gi|322792104|gb|EFZ16176.1| hypothetical protein SINV_09017 [Solenopsis invicta]
Length = 55
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI 75
+ AP+R ITV+D + DLP + +G++ M PY SEP+ FQ+K+
Sbjct: 9 DSAPYRNITVKDALSDLPPIKSGSNKEEM------PYNSEPITHFQRKV 51
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 30 PFRA-ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISK 88
P +A +++D +GDLP + +G E G + Y F + +R L++H S
Sbjct: 177 PIKAHFSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSP 229
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
+E LI+ + K S LP + + + + ++ WE
Sbjct: 230 KNNE-KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPA 274
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
PT +T C HP R +++RE AR Q F D+YKF G
Sbjct: 275 PT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G + + G+ L F + +G L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSGENGDAL--GYLKN-ADNVFLEFVRNSKG----LSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R++++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRVLSIREGARLQSFPDNYKFYG 317
>gi|334126762|ref|ZP_08500708.1| C-5 cytosine-specific family DNA methylase [Centipeda periodontii
DSM 2778]
gi|333390922|gb|EGK62046.1| C-5 cytosine-specific family DNA methylase [Centipeda periodontii
DSM 2778]
Length = 537
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL + V V P K VL K +RG L +H++ A ++
Sbjct: 365 TVRDAIGDLQEIAPSIDVHADSVKLL-PQKGGSVL--AKNLRGARLY--NHVAPATGDIA 419
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + + G ++ L + + +TA N ++ RL ++ T V
Sbjct: 420 LARFHAL--REGQNFHDLNAS-----LKTTYTDTARTQNT---IYMRLCYDEPCGTVVNV 469
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR I++RE AR Q F DS+ F G
Sbjct: 470 RKSMWI-----HPVLDRAISIREAARLQTFPDSFVFEG 502
>gi|423068121|ref|ZP_17056909.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
gi|355367012|gb|EHG14725.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
Length = 351
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 31/182 (17%)
Query: 16 NSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI 75
NS + + AP T+++ DLP++ +G S SS + +K I
Sbjct: 157 NSFFDCLAEYVEAAP----TIKELFEDLPSIKSGGSSHKYRCDVSSQ-------FVEKYI 205
Query: 76 RGDMLVLNDHISKAMSE--LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN 133
R +L H ++ +E L + + K+ G + R + +P + H+
Sbjct: 206 RKKDDILTQHAARPHNENDLKIYKLVLRAKKKGKNLRYID-----------IPEELQTHS 254
Query: 134 QWKGLFGR---LDWEGNFPTSVTDPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSY 188
R LD+ G+ +V H HP+ Q+R ITVRE AR QGF D +
Sbjct: 255 NTTSFLDRYKALDY-GSVSHTVV-AHIAKDGHYYIHPDLRQNRSITVREAARIQGFPDDF 312
Query: 189 KF 190
F
Sbjct: 313 YF 314
>gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit
[Bacillus thuringiensis BMB171]
Length = 602
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I DL + S + ++ ++ ++ V+ + + V+ +HI+ L+
Sbjct: 416 TVRDAIADLEGITPAKSTESHKIDYNIEL-NKTVMQHYYRSGMNHNVIYNHINTDSEPLS 474
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
R ++I + G ++ L SE L + + N ++ RL+++ PT +
Sbjct: 475 QQRFEEIKRTDGKNFHSLSSE----LKDVSYADASRTQN---TVYLRLNYDTPSPTVINV 527
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M HP + +++RE AR Q F D+Y F G
Sbjct: 528 RKSMWQ-----HPTKAMALSIREAARLQSFKDNYIFKG 560
>gi|420437308|ref|ZP_14936292.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393053622|gb|EJB54566.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 348
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420414875|ref|ZP_14913991.1| DNA-cytosine methyltransferase [Helicobacter pylori NQ4053]
gi|393033842|gb|EJB34903.1| DNA-cytosine methyltransferase [Helicobacter pylori NQ4053]
Length = 138
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 38 LPESLRPKSGYTNTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 96
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 97 PDNYKFYG 104
>gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Moorea producens 3L]
gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 12 KLARNSHYAAVRSTANGAPFRA--ITVRDTIGDLP-AVGNGASVTTMEVGFSSPYKSEPV 68
+L + A + +G FR IT+ I LP A + ++ T P S P
Sbjct: 197 RLGHDFRIPAPKFQVSGQLFRNSDITISHAINSLPPATKDKGTLLT-------PLTSPPQ 249
Query: 69 LWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE------------K 116
F +RG+ ++DH +++ + L R + +PG + LP E +
Sbjct: 250 DDFDSFLRGNATQISDHYYPSINGIQLQRITAL--KPGQTMKDLPEELQHESFKKRANRR 307
Query: 117 VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT-SVTDPHPMGMVGTCFHPNQDRIITV 175
V D +P EK RL GN P+ ++T ++ HP ++R +T+
Sbjct: 308 VADGMP------TEKRGGAPSGLKRL--MGNEPSLTITGAATRELI----HPVENRPLTI 355
Query: 176 RECARSQGFSDSYKFVGDIQHIIGRL 201
RE AR Q F D + F G+ I ++
Sbjct: 356 REAARIQTFPDDFVFCGNASQKIQQI 381
>gi|452203100|ref|YP_007483233.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
gi|452110159|gb|AGG05891.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
Length = 538
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV D I D+ ++ T E G + P+ K +R + N H+S +E +
Sbjct: 363 TVYDAIKDIESIDAIYDATEGEKGVPIESQPRPISALGKLLRNSDRLYN-HVSTETTEDS 421
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L R + I +PG ++ L ++ + N N ++ RL ++ T V
Sbjct: 422 LKRFKAI--KPGDNFHSLNAD-----LKSTYSNPERTQNT---IYLRLKYDAPSGTVVNI 471
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR +++RE AR Q F DS+ F G
Sbjct: 472 RKSMWI-----HPVLDRALSIREAARLQTFPDSFVFFG 504
>gi|428210295|ref|YP_007094648.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428012216|gb|AFY90779.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 390
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +WR LP E + + + K G + RL W PT T P+ C
Sbjct: 262 GQNWRNLPDELKKEAMGGAYNSGGGK----VGFYRRLSWNKPSPTVTTSPY-QKATDMC- 315
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVG 192
HP + R ++VRECA+ Q F D + F G
Sbjct: 316 HPEELRPLSVRECAKIQTFPDDWIFYG 342
>gi|419648632|ref|ZP_14179966.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
gi|380626143|gb|EIB44638.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
Length = 356
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ +++++ + DLP + +G E G + Y+ +P F +R +L +H S +
Sbjct: 182 KFVSLKEALDDLPFIQSG------ENGNNKGYRFKPNNAFLSFVRKSE-ILKEH-SSPKN 233
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
+NLIR + K G LP E + + + + ++ W+ PT
Sbjct: 234 NINLIRIMQTLKD-GESKNSLPLE-------------LQPKSGYCNTYAKMWWDRPAPT- 278
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D Y F G
Sbjct: 279 ITRNFATPSSSRCIHPRDSRALSIREGARLQSFPDDYIFYG 319
>gi|379011713|ref|YP_005269525.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
gi|375302502|gb|AFA48636.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
Length = 347
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 84 DHISKAMSELNLIRCQKIPKQPG-SDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
DH + A++E NL+R + P+ G DW + DL C N H ++GRL
Sbjct: 217 DHCAAALTEKNLMRIRATPEGGGREDW-------IDDLKLDCHKN----HIGHTDVYGRL 265
Query: 143 DWEGNFPTSVTD--PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
++ T T + G G HP +DR ++VRE A Q F ++ F G +
Sbjct: 266 SYDKKCSTLTTKCISYSNGRYG---HPVEDRALSVREAACLQTFDRTFAFAGKL 316
>gi|420501298|ref|ZP_14999842.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393150104|gb|EJC50412.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 351
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|237704019|ref|ZP_04534500.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA]
gi|387832270|ref|YP_003352207.1| methyltransferase [Escherichia coli SE15]
gi|419942745|ref|ZP_14459333.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli HM605]
gi|422359336|ref|ZP_16439980.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 110-3]
gi|422756219|ref|ZP_16810042.1| C-5 cytosine-specific DNA methylase [Escherichia coli H263]
gi|422840131|ref|ZP_16888102.1| hypothetical protein ESPG_02788 [Escherichia coli H397]
gi|427807545|ref|ZP_18974612.1| m5 cytosine dna methyltransferase [Escherichia coli chi7122]
gi|427812124|ref|ZP_18979189.1| m5 cytosine dna methyltransferase [Escherichia coli]
gi|432498171|ref|ZP_19739954.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|432510109|ref|ZP_19748970.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE220]
gi|432556896|ref|ZP_19793594.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE49]
gi|432586211|ref|ZP_19822586.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|432595731|ref|ZP_19832025.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE62]
gi|432649245|ref|ZP_19885015.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|432692556|ref|ZP_19927780.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|432757397|ref|ZP_19991935.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|432776767|ref|ZP_20011026.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|432781764|ref|ZP_20015951.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE63]
gi|432790469|ref|ZP_20024591.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|432819236|ref|ZP_20052952.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|432825363|ref|ZP_20059023.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|432916637|ref|ZP_20121532.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|432923975|ref|ZP_20126441.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|432944385|ref|ZP_20140849.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE196]
gi|432979257|ref|ZP_20168048.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|432998050|ref|ZP_20186602.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE223]
gi|433045837|ref|ZP_20233299.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE117]
gi|433099230|ref|ZP_20285378.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|433108695|ref|ZP_20294634.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|433128027|ref|ZP_20313549.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE160]
gi|433142085|ref|ZP_20327306.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE167]
gi|433152003|ref|ZP_20336985.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE174]
gi|442605521|ref|ZP_21020339.1| putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)
[Escherichia coli Nissle 1917]
gi|443615832|ref|YP_007379688.1| methyltransferase [Escherichia coli APEC O78]
gi|20068985|gb|AAM09639.1|AF458982_2 m5 cytosine DNA methyltransferase [Escherichia coli]
gi|226901931|gb|EEH88190.1| DNA methyltransferase [Escherichia sp. 3_2_53FAA]
gi|281181427|dbj|BAI57757.1| methyltransferase [Escherichia coli SE15]
gi|315286888|gb|EFU46305.1| C-5 cytosine-specific DNA methylase [Escherichia coli MS 110-3]
gi|323955407|gb|EGB51176.1| C-5 cytosine-specific DNA methylase [Escherichia coli H263]
gi|371607683|gb|EHN96249.1| hypothetical protein ESPG_02788 [Escherichia coli H397]
gi|388422683|gb|EIL82247.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli HM605]
gi|412965727|emb|CCK49660.1| m5 cytosine dna methyltransferase [Escherichia coli chi7122]
gi|412972303|emb|CCJ46975.1| m5 cytosine dna methyltransferase [Escherichia coli]
gi|431032624|gb|ELD45331.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE220]
gi|431033804|gb|ELD45754.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431095355|gb|ELE00972.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE49]
gi|431124767|gb|ELE27215.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|431134942|gb|ELE36876.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE62]
gi|431194531|gb|ELE93746.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|431238287|gb|ELF33209.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|431298135|gb|ELF87770.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|431332352|gb|ELG19581.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|431332657|gb|ELG19878.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE63]
gi|431334005|gb|ELG21180.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|431371614|gb|ELG57321.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|431376554|gb|ELG61876.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|431449812|gb|ELH30379.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|431450807|gb|ELH31288.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|431465048|gb|ELH45160.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE196]
gi|431499284|gb|ELH78463.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|431516479|gb|ELH94084.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE223]
gi|431549616|gb|ELI23693.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE117]
gi|431609799|gb|ELI79106.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|431621255|gb|ELI90068.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|431637985|gb|ELJ06034.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE160]
gi|431653559|gb|ELJ20651.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE167]
gi|431665615|gb|ELJ32332.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE174]
gi|441713496|emb|CCQ06316.1| putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)
[Escherichia coli Nissle 1917]
gi|443420340|gb|AGC85244.1| methyltransferase [Escherichia coli APEC O78]
Length = 396
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 76 RGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQW 135
+ + ++ +H + +SEL+++ +P PG +W+ +P + I + A+
Sbjct: 3 KSETFMIPNHKAAKLSELDMMIVNSVP--PGGNWKNIPLDVPSKRIEQIRDSYAQGKGSR 60
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTC-FHPNQDRIITVRECARSQGFSDSYKFVG 192
+GRL + P + + C H QDR+++ RE AR Q F D + F G
Sbjct: 61 STYYGRL--LPDMPAYTINTYFNRPGNGCHIHYEQDRVLSQREAARLQSFPDDFIFFG 116
>gi|421714623|ref|ZP_16153944.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407218308|gb|EKE88137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 351
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCG 317
>gi|384894068|ref|YP_005768117.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R ++VRE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R ++VRE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R ++VRE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|419139836|ref|ZP_13684620.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC5E]
gi|377978634|gb|EHV41913.1| C-5 cytosine-specific DNA methylase family protein [Escherichia
coli DEC5E]
Length = 396
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 76 RGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQW 135
+ + ++ +H + +SEL+++ +P PG +W+ +P + I + A+
Sbjct: 3 KSETFMIPNHKAAKLSELDMMIINSVP--PGGNWKNIPLDVPSKRIEQIRDSYAQGKGSR 60
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTC-FHPNQDRIITVRECARSQGFSDSYKFVG 192
+GRL + P + + C H QDR+++ RE AR Q F D + F G
Sbjct: 61 STYYGRL--LPDMPAYTINTYFNRPGNGCHIHYEQDRVLSQREAARLQSFPDDFIFFG 116
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R ++VRE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|385226718|ref|YP_005786642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
gi|344331631|gb|AEN16661.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
Length = 351
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCG 317
>gi|110735992|dbj|BAE99970.1| chromomethylase [Arabidopsis thaliana]
Length = 150
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 139 FGRL--DWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
FGRL D N + +PH ++ HP Q+R+++VRE AR QGF D YK G I+
Sbjct: 44 FGRLWGDEIVNTVVTRAEPHNQCVI----HPMQNRVLSVRENARLQGFPDCYKLCGTIKE 99
>gi|335437820|ref|ZP_08560578.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|335438109|ref|ZP_08560859.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334892798|gb|EGM31025.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334893981|gb|EGM32189.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
Length = 373
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 38/194 (19%)
Query: 10 KVKLARNSHYAAVRSTANG-APFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPV 68
+V L +H ++ + G P+R TV D IGDLP + G +
Sbjct: 182 EVTLPEPTHAPPEQADSEGKEPYR--TVGDAIGDLPPLEAGET----------------- 222
Query: 69 LWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNT 128
D L N H ++ + + ++IP+ GS LP E ++ C N
Sbjct: 223 --------HDDLPFNGHRARNHRKNTVEFMKQIPENGGS-RTDLPEEDQLE----CHKNL 269
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
K + ++GR+ WE PT +T G HP QDR I+ RE AR F D Y
Sbjct: 270 DNKSSAGN-VYGRMTWEEPGPT-LTGRCTTPSSGRFVHPEQDRGISPREAARIMTFPDDY 327
Query: 189 KFV---GDIQHIIG 199
G + +IG
Sbjct: 328 DLPDSNGTAERLIG 341
>gi|384890849|ref|YP_005764982.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
gi|385223523|ref|YP_005783449.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
gi|385231372|ref|YP_005791291.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
gi|307637158|gb|ADN79608.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
gi|325995749|gb|ADZ51154.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
gi|325997345|gb|ADZ49553.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
Length = 138
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 38 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 96
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 97 PDNYKFYG 104
>gi|420451795|ref|ZP_14950645.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp A-6]
gi|393069636|gb|EJB70431.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp A-6]
Length = 138
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 38 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 96
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 97 PDNYKFYG 104
>gi|429737286|ref|ZP_19271155.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
gi|429153032|gb|EKX95830.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
Length = 539
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD IGDL + V + + P +S+ V K +RG + L +H+ A +
Sbjct: 367 TVRDAIGDLQEIPPSVDVDSDSIKL--PPRSD-VSVLAKNLRG--MRLYNHVVTATGDTA 421
Query: 95 LIRCQKIPKQPGSDWRVLPSE-KVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
L R + + Q G ++ L S K NT ++ RL ++ T V
Sbjct: 422 LTRFRAL--QEGQNFHDLDSSLKTTYTDTTRTQNT---------IYMRLRYDEPCGTVVN 470
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR I++RE AR Q F DS+ F G
Sbjct: 471 VRKSMWI-----HPTLDRAISIREAARLQTFPDSFIFEG 504
>gi|384895833|ref|YP_005769822.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|89890924|ref|ZP_01202433.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium
BBFL7]
gi|89517069|gb|EAS19727.1| DNA (cytosine-5-)-methyltransferase, dcm [Flavobacteria bacterium
BBFL7]
Length = 356
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H +SEL L R +++ K G+ ++ + L + +T+ +K FGRL
Sbjct: 221 NHSVPNISELTLRRLKRVEKDGGNRLS-FANDPELQLNCFIGRDTS-----FKDTFGRLW 274
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
W+ PT T + G HP ++R +++RE A Q F YKF+G I RL
Sbjct: 275 WDKPSPTITTKFFSVSN-GRFVHPVENRALSIREGAVLQSFPKDYKFIGTSMGSIARL 331
>gi|420490495|ref|ZP_14989081.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420524322|ref|ZP_15022732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109838|gb|EJC10369.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133481|gb|EJC33898.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420435793|ref|ZP_14934792.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492530|ref|ZP_14991104.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420506345|ref|ZP_15004860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420526553|ref|ZP_15024954.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051652|gb|EJB52603.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106969|gb|EJC07512.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393115850|gb|EJC16360.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393131858|gb|EJC32281.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|385229774|ref|YP_005789690.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
gi|344336212|gb|AEN18173.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|421721497|ref|ZP_16160772.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
gi|407224832|gb|EKE94607.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420539629|ref|ZP_15037948.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|393147314|gb|EJC47639.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
Length = 338
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 169 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 220
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 221 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 265
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 266 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 304
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
Length = 350
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+TV D IGD+P + T +EV + G + HI + +
Sbjct: 193 VTVHDAIGDIPLA---TARTEVEV-----------------VDGQQDL---HIGRNARPM 229
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+L R Q IP+ G + R + DL+P C N K + GRL W+ T T
Sbjct: 230 SLARYQAIPE--GGN-RFDLARNRPDLLPKCWAN---KPTGTTDVMGRLWWDRPSVTIRT 283
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ + G HP DR IT RE AR Q F D ++F G
Sbjct: 284 EFY-KPEKGRYLHPVADRPITHREAARLQSFPDDFEFEG 321
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420468527|ref|ZP_14967269.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393088208|gb|EJB88860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 352
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420495802|ref|ZP_14994366.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393112113|gb|EJC12634.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
Length = 351
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|359425654|ref|ZP_09216750.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
gi|358239145|dbj|GAB06332.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
Length = 395
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLD 143
H + +L+L R + I GS W + K P L KHN+ G + GRL
Sbjct: 256 HFGRTYRKLSLDRFKAISPNGGSRWELPDHLKA----PCWL-----KHNRGSGDVMGRLT 306
Query: 144 WEGNFPTSVTD---PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
WE T T+ P G HP +DR+IT E A QGF + Y +VG + I
Sbjct: 307 WEKPSVTIRTEFFKPEK----GRYIHPEEDRVITHYEAALIQGFPEDYCWVGTREEI 359
>gi|420461842|ref|ZP_14960629.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393080005|gb|EJB80734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 325
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 155 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 206
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 207 KLIKIMQTLKDGQSKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 249
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 250 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 290
>gi|238602700|ref|XP_002395753.1| hypothetical protein MPER_04141 [Moniliophthora perniciosa FA553]
gi|215467019|gb|EEB96683.1| hypothetical protein MPER_04141 [Moniliophthora perniciosa FA553]
Length = 88
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGD 193
HP+Q R+ T+RE ARSQGF D YKF+ +
Sbjct: 7 LHPSQKRVYTIREAARSQGFPDHYKFLSE 35
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420473869|ref|ZP_14972547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393090997|gb|EJB91630.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 351
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 251 LPESLRPKSGYTNTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 309
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 310 PDNYKFYG 317
>gi|420433643|ref|ZP_14932651.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420507397|ref|ZP_15005910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420509085|ref|ZP_15007587.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420532834|ref|ZP_15031197.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420534397|ref|ZP_15032748.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536203|ref|ZP_15034545.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420537907|ref|ZP_15036237.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420541394|ref|ZP_15039702.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|420542914|ref|ZP_15041209.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393051171|gb|EJB52124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393119478|gb|EJC19969.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393120511|gb|EJC21000.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393140465|gb|EJC40838.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393142620|gb|EJC42974.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393143851|gb|EJC44195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393145462|gb|EJC45793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393148014|gb|EJC48338.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393159977|gb|EJC60226.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 351
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|18202059|sp|O52702.1|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName:
Full=Cytosine-specific methyltransferase ApaLI
gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus]
Length = 429
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 62 PY-KSEPVLWFQKKIRGD--MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE--- 115
PY SEPV F ++R + V+ H+ +E R Q +PG + LP E
Sbjct: 221 PYASSEPVNAFDARMRAGNRVEVVTHHVRVEAAE----RMQVELLKPGQTMKDLPPELWH 276
Query: 116 ---------KVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT-SVTDPHPMGMVGTCF 165
+V D P EK RL GN + ++T P +
Sbjct: 277 ESYRRRANRRVSDGTP------TEKRGGAPSGIKRL--HGNLQSLTITGPAAREFI---- 324
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
HP + R +T+RECAR Q F D Y++VG+ +I ++
Sbjct: 325 HPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQI 360
>gi|420522621|ref|ZP_15021045.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393129578|gb|EJC30012.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 326
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 157 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 208
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 209 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 253
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 254 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 292
>gi|420485505|ref|ZP_14984123.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420515995|ref|ZP_15014458.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420517700|ref|ZP_15016154.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393103640|gb|EJC04203.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393123199|gb|EJC23668.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393124294|gb|EJC24762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|387907797|ref|YP_006338131.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
gi|387572732|gb|AFJ81440.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
Length = 352
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ESGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + ++ WE PT
Sbjct: 234 KLIKIMQTLKDGQSKDD----------------LPKHLRPKSGYTNTYAKMWWEKPAPT- 276
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420466783|ref|ZP_14965540.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393085181|gb|EJB85869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|386745963|ref|YP_006219180.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
gi|384552212|gb|AFI07160.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|410023717|ref|YP_006892970.1| type II DNA modification [Helicobacter pylori Rif1]
gi|410501484|ref|YP_006936011.1| type II DNA modification [Helicobacter pylori Rif2]
gi|410682003|ref|YP_006934405.1| type II DNA modification [Helicobacter pylori 26695]
gi|409893644|gb|AFV41702.1| type II DNA modification [Helicobacter pylori 26695]
gi|409895374|gb|AFV43296.1| type II DNA modification [Helicobacter pylori Rif1]
gi|409897035|gb|AFV44889.1| type II DNA modification [Helicobacter pylori Rif2]
Length = 262
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 96 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 147
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 148 KLIKIMQTLKDGQSKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 190
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 191 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 231
>gi|420488940|ref|ZP_14987537.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393107690|gb|EJC08230.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|355647183|ref|ZP_09054875.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
gi|354828056|gb|EHF12186.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
Length = 356
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPT---SVTDPHPMGMVGTCFHPNQDRIITVRECARS 181
LP ++ ++ ++GR+ W PT T+P G HP QDR IT+RE A
Sbjct: 246 LPCHIKRPGSYRDVYGRMAWNDVSPTITGGCTNPSK----GRFIHPEQDRAITLREAALL 301
Query: 182 QGFSDSYKF 190
Q F +YKF
Sbjct: 302 QTFPQNYKF 310
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINAYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|269797252|ref|YP_003311152.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
gi|269093881|gb|ACZ23872.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
Length = 423
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 36 VRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNL 95
+++ DLP + G S + S Y QK IR + +L HI++ S+ N
Sbjct: 239 LKELFADLPNIRAGKSSKKYCCNYVSKY-------VQKYIRSNDDILTQHIARPHSK-ND 290
Query: 96 IRCQKIPKQPGSDWRVLPSEKVVDLIPWC-LPNTAEKHNQWKGLFGR---LDWEGNFPTS 151
+R K+ VL ++K+ + + + +P + H+ R LD++ T
Sbjct: 291 LRIYKL---------VLKAKKIGENLRYNDIPVELQTHSNTTSFLDRYKALDYDSVSHTV 341
Query: 152 VTDPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKF 190
V G HP+ Q+R I+VRE AR QGF D++ F
Sbjct: 342 VAHISKDGHY--YIHPDLRQNRSISVREAARIQGFPDNFYF 380
>gi|414079711|ref|YP_007001135.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413972990|gb|AFW97078.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 390
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+ IS + + L +R G +W+ LP E L P + G + RL
Sbjct: 245 EFISYSENRLKFLRLLAA----GQNWKNLPEE----LQPEAMGGAYNSGGGKVGFYRRLS 296
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
W+ PT T P C HP + R +TVRE A+ Q F D + F G I
Sbjct: 297 WDKPSPTITTSPQ-QKATDMC-HPVELRPLTVRESAKIQTFPDDWIFHGSI 345
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|355646954|ref|ZP_09054740.1| hypothetical protein HMPREF1030_03826 [Pseudomonas sp. 2_1_26]
gi|354828286|gb|EHF12411.1| hypothetical protein HMPREF1030_03826 [Pseudomonas sp. 2_1_26]
Length = 403
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 126 PNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFS 185
P A ++ +K ++GRL W T + + M M G HP++ R +T RE AR Q F
Sbjct: 305 PCHAHGNHSYKSIYGRLKWSEPSQTITSGFYSMCM-GRYVHPSRRRTLTAREAARLQFFP 363
Query: 186 DSYKF 190
D +KF
Sbjct: 364 DYFKF 368
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCG 317
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|365837695|ref|ZP_09379055.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
gi|364561408|gb|EHM39312.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
Length = 346
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 42/162 (25%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I DLP + G ++ P + DH + ++S LN
Sbjct: 196 TVRDWISDLPPISAG--------------ETHPQIM-------------DHAAPSLSALN 228
Query: 95 LIRCQKIPKQPGSD-WRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ R + P+ G + W P E +++ C N HN ++GRL W+ P S
Sbjct: 229 IKRIKATPEGKGRESW---PEELMLE----CHKN----HNGHSDVYGRLAWDK--PASGL 275
Query: 154 DPHPMGMVGTCF-HPNQDRIITVRECARSQGFSDSYKFVGDI 194
+ F HP Q+R ++VRE A Q F Y F G +
Sbjct: 276 TTRCISYSNGRFGHPEQNRALSVREAASLQTFPRDYLFHGSL 317
>gi|420482042|ref|ZP_14980679.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420512466|ref|ZP_15010949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393099276|gb|EJB99857.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393157529|gb|EJC57790.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 351
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420428481|ref|ZP_14927516.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp A-17]
gi|393046140|gb|EJB47120.1| DNA-cytosine methyltransferase [Helicobacter pylori Hp A-17]
Length = 136
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 35 LPENLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 93
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 94 PDNYKFYG 101
>gi|384889114|ref|YP_005763416.1| DNA-cytosine methyltransferase, partial [Helicobacter pylori v225d]
gi|297379680|gb|ADI34567.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d]
Length = 265
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 96 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 147
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + ++ WE PT
Sbjct: 148 KLIKIMQTLKDGQSKDD----------------LPKNLRPKSGYINTYAKMWWEKPAPT- 190
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 191 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 231
>gi|440680621|ref|YP_007155416.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428677740|gb|AFZ56506.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 391
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGT 163
+ G +W+ LP E L + G + RL W+ PT T PH
Sbjct: 261 EAGQNWKHLPEE----LKKEAMGGAYNSGGGKVGFYRRLSWDKPSPTITTSPH-QKATDM 315
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
C HP + R +TVRE A+ Q F D + F G +
Sbjct: 316 C-HPVELRSLTVRESAKIQTFPDDWIFYGSV 345
>gi|421713201|ref|ZP_16152532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216567|gb|EKE86404.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 351
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIRERARLQSFPDNYKFCG 317
>gi|420494407|ref|ZP_14992976.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393111208|gb|EJC11732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 351
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
+ +++D +GDLP + +G E G + Y F K +R L++H S +
Sbjct: 181 KHFSLKDALGDLPQIQSG------ENGNALGYLKNADNDFLKFVRNSK-ELSEHSSPKNN 233
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
E LI + K G LP DL P + + + ++ WE PT
Sbjct: 234 E-KLIEIMQTLKD-GQSKDDLPK----DLRP---------KSGYINTYAKMWWEKPAPT- 277
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D YKF G
Sbjct: 278 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFRDDYKFYG 318
>gi|425432239|ref|ZP_18812811.1| hypothetical protein HMPREF1391_00385 [Helicobacter pylori
GAM100Ai]
gi|410715218|gb|EKQ72643.1| hypothetical protein HMPREF1391_00385 [Helicobacter pylori
GAM100Ai]
Length = 135
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 35 LPENLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 93
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 94 PDNYKFYG 101
>gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 417
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 31/182 (17%)
Query: 16 NSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKI 75
NS + + AP T+++ DLP++ +G S SS + +K I
Sbjct: 223 NSFFDCLAEYVEVAP----TIKELFEDLPSIKSGGSSHKYRCDVSSQ-------FVEKYI 271
Query: 76 RGDMLVLNDHISKAMSE--LNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN 133
R +L H ++ +E L + + K+ G + R + +P + H+
Sbjct: 272 RKKDGILTQHTARPHNENDLKIYKLVLKAKKKGKNLRYID-----------IPEELQTHS 320
Query: 134 QWKGLFGR---LDWEGNFPTSVTDPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSY 188
R LD+ G+ +V H HP+ Q+R ITVRE AR QGF D +
Sbjct: 321 NTTSFLDRYKALDY-GSVSHTVV-AHIAKDGHYYIHPDLRQNRSITVREAARIQGFPDDF 378
Query: 189 KF 190
F
Sbjct: 379 YF 380
>gi|420420452|ref|ZP_14919538.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393036143|gb|EJB37183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 190
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 90 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 148
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 149 PDNYKFCG 156
>gi|421718029|ref|ZP_16157330.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R038b]
gi|407222821|gb|EKE92619.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R038b]
Length = 187
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 90 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 148
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 149 PDNYKFYG 156
>gi|373458182|ref|ZP_09549949.1| DNA-cytosine methyltransferase [Caldithrix abyssi DSM 13497]
gi|371719846|gb|EHO41617.1| DNA-cytosine methyltransferase [Caldithrix abyssi DSM 13497]
Length = 416
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 22/182 (12%)
Query: 16 NSHYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLW-FQKK 74
N Y N A F+ V D + DLP + G +T Y P + F
Sbjct: 222 NLKYPEFSPDKNVAKFK---VHDILDDLPPLEPGERITV------GKYIKPPSKYLFDYG 272
Query: 75 IRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQ 134
IR L HI++ +E R +KI K +WR D LP + H
Sbjct: 273 IRNGWNTLIQHIARGHNE----RDRKIYKFYIENWRKEKRRPDYD----ELPEELKTHKN 324
Query: 135 WKGLFGRLDW-EGNFPTSVTDPHPMGMVGTCF-HP--NQDRIITVRECARSQGFSDSYKF 190
K R + P S T + G F HP NQ R I+VRE AR Q F D++ F
Sbjct: 325 RKVFRDRFKVVASDLPYSQTIVAHLAKDGHYFIHPDINQLRSISVREAARIQSFPDNFYF 384
Query: 191 VG 192
G
Sbjct: 385 EG 386
>gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 342
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 12 KLARNSHYAAVRSTANGAP---FRAITVRDTIGDLP-AVGNGASVTTMEVGFSSP----- 62
KL ++Y + ++ +G P R I + IGD+ V+ ME + P
Sbjct: 142 KLGYETNYKILDASEHGVPQKRKRVIFIGSRIGDVEFPKPKDKKVSVMEALGNIPDTNFE 201
Query: 63 YKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIP 122
Y EP FQ+ + + +H + +E L R + +P+ G +W+ +P E + D+
Sbjct: 202 YYDEPTNSFQELMADGEKKIYNHDAMKHNEKVLKRIENVPQ--GGNWQDIPPE-IYDV-- 256
Query: 123 WCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQ 182
N ++ RLD N P S+T H + HP +R+IT RE AR Q
Sbjct: 257 -----GGTHSNNYR----RLDP--NKP-SITIKH--AIKSMIIHPTFNRVITAREAARLQ 302
Query: 183 GFSDSYKFVGD 193
DS+ G+
Sbjct: 303 SIPDSFIIKGN 313
>gi|428219918|ref|YP_007083390.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992261|gb|AFY71954.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 409
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG W+ LP V+L + + + +G+ RL W T + P C
Sbjct: 216 PGGCWQALP----VELQKQYMGKSFDTEGGKRGMARRLAWHEPSLTLLCSP-AQKQTERC 270
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVG 192
HP+ R +TVRE AR QGF DS+ F G
Sbjct: 271 -HPDHTRPLTVREYARIQGFPDSFVFTG 297
>gi|420427151|ref|ZP_14926196.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393042084|gb|EJB43095.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 335
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 169 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 220
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 221 KLIKIMQTLKDGQNKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 263
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 264 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 304
>gi|421711470|ref|ZP_16150813.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212619|gb|EKE82481.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 351
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 251 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 309
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 310 PDNYKFCG 317
>gi|420432040|ref|ZP_14931059.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393049633|gb|EJB50599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
Length = 351
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|385218742|ref|YP_005780217.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCG 317
>gi|333398774|ref|ZP_08480587.1| cytosine-specific methyltransferase [Leuconostoc gelidum KCTC 3527]
Length = 420
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-GDMLVLNDHISKAMSE 92
+T+++ + DLP++ +G V Y S P + ++ R D L L ++++ E
Sbjct: 246 VTLKEALSDLPSLKSGQEVNN--------YASSPSQYTRRYFRKDDKLPLTQNLARPNIE 297
Query: 93 LNLIRCQKI--PKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
+L Q + K G + R + +P L T + +++ + L W+ P+
Sbjct: 298 RDLKIYQLVLQSKIKGHNMRY-------NELPENL-RTHKNVDKFLDRYKALSWDK--PS 347
Query: 151 SVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDSYKF 190
H HP NQ+R ITVRE AR QGF D + F
Sbjct: 348 HTIVAHIAKDGHHYIHPDVNQNRSITVREAARIQGFPDDFYF 389
>gi|385220298|ref|YP_005781770.1| type II DNA modification [Helicobacter pylori India7]
gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 251 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 309
Query: 185 SDSYKFVG 192
D+YKF G
Sbjct: 310 PDNYKFCG 317
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKHLRPKSGYTNTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420465164|ref|ZP_14963931.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082651|gb|EJB83367.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 351
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|386087512|ref|YP_006003386.1| cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387910603|ref|YP_006340909.1| cytosine-specific methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387575538|gb|AFJ84244.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus MN-ZLW-002]
Length = 515
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
K + RL+ + PT VT P HP DR++TVRE AR Q F DS++F+G
Sbjct: 423 KSIRTRLNPDSVSPTIVTLPDDF------IHPYFDRVLTVREMARMQSFDDSFEFLG 473
>gi|415952627|ref|ZP_11557195.1| Site-specific DNA-methyltransferase [Herbaspirillum frisingense
GSF30]
gi|407757364|gb|EKF67360.1| Site-specific DNA-methyltransferase [Herbaspirillum frisingense
GSF30]
Length = 436
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQW---KGLFGRLDWEGNFPTSVTDPHPMGMVG 162
G +WR LP + + ++ W G F RL W+ P T P+ +
Sbjct: 255 GGNWRDLPEADQKEAL-------GGAYHSWGGRSGFFRRLSWDKPSPALPTTPNAKATM- 306
Query: 163 TCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
C HP + R ++VRE AR Q F D +KF G I
Sbjct: 307 LC-HPTELRPLSVREYARIQQFPDDWKFSGSI 337
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPKNLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+YKF G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 234 KLIKIMQTLKDGQNKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 276
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|449989986|ref|ZP_21821263.1| DNA-cytosine methyltransferase [Streptococcus mutans NVAB]
gi|449182156|gb|EMB84197.1| DNA-cytosine methyltransferase [Streptococcus mutans NVAB]
Length = 516
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 63 YKSEPVLWFQKKIRGDMLVLND-------HISKAMS-------ELNLIRCQKIPKQPGSD 108
+KSE L F + G +L +ND HI K+++ E + +I Q SD
Sbjct: 339 FKSERWLQFTNRQLG-LLSMNDTDNSAKQHILKSLALRLKTSFEEAELFWNEIKNQLNSD 397
Query: 109 WRVLPSEKVV---DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
K++ DL P + K K + RLD PT VT P
Sbjct: 398 ITEDKFSKMLRDGDLTPEAIEAIFTK----KSIRVRLDQNSVSPTMVTLPD------DYI 447
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVG 192
HP +R++TVRE AR Q F DS++F+G
Sbjct: 448 HPFFNRVLTVREMARLQSFDDSFEFLG 474
>gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 374
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTD-PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSY 188
E H+ G +GR+DW+ T T P G G HP+ DR +T RE AR Q F D +
Sbjct: 275 EIHSVHSGAYGRMDWDKPSMTITTRFDTPSG--GRFTHPDLDRTLTAREAARIQTFPDDF 332
Query: 189 KFVGDIQHIIGRL---------EMLFHLLWRLHWGEN 216
F G I ++ E L H + L+ N
Sbjct: 333 IFSGSKTSICKQIGNAVPPRLAEFLAHFILYLNSKYN 369
>gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205]
gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205]
Length = 353
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H +S N+ R Q + +PG LP E + D + K + ++GR+ W
Sbjct: 220 HRRDRLSAKNIARLQAL--KPGQGRDFLPPELLADC-----HKVSSKLIGHRNVYGRMPW 272
Query: 145 EGNFPTSVT--DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
+ PT D GM G HP Q+R I++RE A Q F + FVG+
Sbjct: 273 DDVAPTITARFDSFTRGMFG---HPEQNRSISLREGAILQTFPADFVFVGN 320
>gi|374704182|ref|ZP_09711052.1| cytosine-specific methyltransferase [Pseudomonas sp. S9]
Length = 449
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 89 AMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNF 148
A SE + Q+I K + E + LI + N + + RL W
Sbjct: 305 AESERMQKKYQEIIKNHSLSLNITSEEAMQQLIEMKIINPVFFKRYYWSAYSRLAWNAPA 364
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
T + + +G G HP++ R IT+RE AR Q F D ++FV + I
Sbjct: 365 LTITANANFLG-SGRFSHPSEQRGITMREAARLQSFDDDFRFVTSMDEI 412
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 357
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 35/168 (20%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +T D I DLPA+ EVG Y+ EP+ FQK +RG L +H +
Sbjct: 189 PDNYLTCEDAISDLPAL---VDTLGEEVG---KYEMEPLNDFQKLMRGACTTLYNHTAIN 242
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
+ +P G +++ LPS + + H W
Sbjct: 243 HKQFVKDVIALVPD--GGNYKDLPSG---------VGESRTFHMAW-------------- 277
Query: 150 TSVTDPHPMGMVGT----CFHPNQDRIITVRECARSQGFSDSYKFVGD 193
T + P V T FH +R TVRE AR Q F D + F+G+
Sbjct: 278 TRLNSKKPARTVDTGHRNLFHYKYNRCPTVRESARIQTFPDDFVFLGN 325
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 234 KLIKIMQTLKDGQNKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 276
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 234 KLIKIMQTLKDGQNKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 276
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q F D+YKF G
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|317055417|ref|YP_004103884.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
gi|315447686|gb|ADU21250.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
Length = 543
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I D+ V ++T +VG +++ + KK+R D L +HI A +E
Sbjct: 360 TVRDAISDIEDVEPVVNITD-DVGIV--LENKDLEGLAKKLR-DSKKLYNHIITATTETA 415
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R + I + G ++ L DL N N ++ RL ++ T V
Sbjct: 416 MKRFKVIGQ--GQNFHSLSD----DLKSNTYTNPNRTQNT---IYTRLKYDEPSGTVVNV 466
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP +DR +++RE AR Q F DS+ F G
Sbjct: 467 RKSMWI-----HPTKDRALSIREAARLQTFPDSFVFCG 499
>gi|387812928|ref|YP_005428405.1| DNA-cytosine methyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337935|emb|CCG93982.1| Site-specific DNA-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 395
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 106 GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF 165
G +W+ LP +++ + E G + RL + PT VT P + C
Sbjct: 256 GGNWKSLPQ----NVVKEAMGGAYESGGGKVGFYRRLSFSEPSPTLVTSPSQKATL-LC- 309
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R ++VRE AR QGF D++ F G +
Sbjct: 310 HPRELRPLSVREYARIQGFPDNWVFKGSM 338
>gi|406886311|gb|EKD33362.1| hypothetical protein ACD_76C00044G0029 [uncultured bacterium]
Length = 418
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 100 KIPKQPGSDWRVLPSEKVVDLIP----WC-LPNTAEKHNQWK---------GLFGRLDWE 145
K PK PG ++ +K+++LIP W LP +K G+ RL W+
Sbjct: 262 KCPKSPGQEYPE-KKKKIMELIPPGGYWRELPEHLQKEYMGASFYMGGGKTGMARRLSWD 320
Query: 146 GNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
P+ P HP++ R +TVRE AR Q F DS++F G + H
Sbjct: 321 E--PSLTLTCSPAQKQTERCHPDETRPLTVREYARIQTFPDSWEFAGSVGH 369
>gi|238611925|ref|XP_002398088.1| hypothetical protein MPER_01371 [Moniliophthora perniciosa FA553]
gi|215473909|gb|EEB99018.1| hypothetical protein MPER_01371 [Moniliophthora perniciosa FA553]
Length = 82
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 157 PMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRLEM 203
P HPN R++TVRE ARSQGF D + F+ + +I+ E+
Sbjct: 3 PTAKQSRVIHPNCRRMVTVRELARSQGFPDHFVFLAENDNIVAHREI 49
>gi|428219888|ref|YP_007083360.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992231|gb|AFY71924.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 413
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG W+ LP D+ + + + +G+ RL W T + P C
Sbjct: 220 PGGCWQALPG----DIQKQYMGKSFDAEGGKRGMARRLAWHEPSLTLLCSP-AQKQTERC 274
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP+ R +TVRE AR QGF DS+ F G +
Sbjct: 275 -HPDYTRPLTVREYARIQGFPDSFVFTGSV 303
>gi|389574574|ref|ZP_10164634.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
gi|388425696|gb|EIL83521.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
Length = 580
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 36 VRDTIGDLPAVGNGASVTTMEVGFSS--PYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ D IGDL + G +V E+ +S P + P LND+++
Sbjct: 382 IYDAIGDLENISPGVNVKDDELDKTSHQPLLNSP--------------LNDYLNNIDKVY 427
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKG-LFGRLDWEGNFPTSV 152
N +R + + ++ L + + L T H++ + ++ RL + T +
Sbjct: 428 NHVRTES-GEVAQKRFKALKEGQNFHNLDESLKTTYTDHSRTQNTIYRRLAYNEPSDTVL 486
Query: 153 TDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR I++RE AR Q F DSYKF G
Sbjct: 487 NARKSMWV-----HPVIDRAISIREAARLQSFQDSYKFCG 521
>gi|406599807|ref|YP_006745153.1| DNA (cytosine-5-)-methyltransferase family protein [Leuconostoc
gelidum JB7]
gi|406371342|gb|AFS40267.1| DNA (cytosine-5-)-methyltransferase family protein [Leuconostoc
gelidum JB7]
Length = 420
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIR-GDMLVLNDHISKAMSE 92
+T+++ + DLP++ +G V + Y S P + ++ R D L L ++++ E
Sbjct: 246 VTLKEALSDLPSLKSGQEV--------NKYASSPSQYTRRYFRKDDKLPLTQNLARPNIE 297
Query: 93 LNLIRCQKI--PKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
+L Q + K G + R + +P L T + +++ + L W+ P+
Sbjct: 298 RDLKIYQLVLQSKIKGHNMRY-------NELPKNL-RTHKNVDKFLDRYKALSWDK--PS 347
Query: 151 SVTDPHPMGMVGTCFHP--NQDRIITVRECARSQGFSDSYKF 190
H HP NQ+R ITVRE AR QGF D + F
Sbjct: 348 HTIVAHIAKDGHHYIHPDVNQNRSITVREAARIQGFPDDFYF 389
>gi|343494589|ref|ZP_08732839.1| C-5 cytosine-specific DNA methylase [Vibrio nigripulchritudo ATCC
27043]
gi|342825002|gb|EGU59513.1| C-5 cytosine-specific DNA methylase [Vibrio nigripulchritudo ATCC
27043]
Length = 341
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 36/158 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
ITVRD I LP + G KS+P+ H ++SE+
Sbjct: 184 ITVRDAISKLPRLQAGKQS-----------KSDPL----------------HRCASLSEI 216
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
N+ R K +Q G+ W P E L C + + +K ++ R+ ++ PT T
Sbjct: 217 NMKR-MKASRQGGT-WMDWPEE----LRAPC--HRKSTGSTYKSVYARMSYDAPSPTMTT 268
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
G G HP Q+R I++RE A Q F +Y+F
Sbjct: 269 QCFGYGN-GRFGHPTQNRAISLREAAIFQTFPPNYQFT 305
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPESLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+Y+F G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYRFYG 317
>gi|421875759|ref|ZP_16307343.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
gi|372455266|emb|CCF16892.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
Length = 405
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 32/171 (18%)
Query: 33 AITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDM-----------LV 81
+TV D I DL + NG V ++ V +Q+ +R + +
Sbjct: 208 VVTVEDAISDLRFLKNGQESANYNVRYN-------VTAYQQLLRNGITPSANGEPIPSIE 260
Query: 82 LNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGR 141
L++H + + + R +K+ E V L+ P E N K +
Sbjct: 261 LHNHKASKHQDKTVKRFEKLKS----------GESVGQLLERLTPEELEYFNTKKYRCAK 310
Query: 142 LDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
L+ PT +T P + + RI+TVRE AR Q F DS+ F G
Sbjct: 311 LEGSSVSPTVLTLPDDI----VHYDKGNPRILTVREFARLQSFDDSFVFYG 357
>gi|422340607|ref|ZP_16421548.1| hypothetical protein HMPREF9353_00209 [Treponema denticola F0402]
gi|325475447|gb|EGC78628.1| hypothetical protein HMPREF9353_00209 [Treponema denticola F0402]
Length = 354
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGS--DWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGR 141
+H +S+ +L R QK G+ DW DL C K N +K +GR
Sbjct: 220 NHTVAGLSDKSLRRLQKTKHNGGNRLDW-----ANDSDLQLKCF---VGKDNSFKDTYGR 271
Query: 142 LDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ W+ + PT T + G HP++DR +++RE A Q F +Y F
Sbjct: 272 MWWDKSAPTITTKFFSISN-GRFGHPDEDRALSIREGATIQTFPKNYVF 319
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 75/209 (35%), Gaps = 43/209 (20%)
Query: 12 KLARNSHYAAVRSTANGAPFRA--ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVL 69
+L N +G FR IT+ I LP SV+ + +EPV
Sbjct: 173 RLGHNYKLPEATIRVSGQIFRNSDITISHAIDTLPVAAKSKSVSVTPI-------TEPVR 225
Query: 70 -WFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNT 128
F +RG+ + + DH + + L R + +PG + LP
Sbjct: 226 DKFDLILRGNAVEITDHYCPLIKGIQLERISAL--KPGQTMKDLPDHL------------ 271
Query: 129 AEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGM----------------VGTCFHPNQDRI 172
+H +K R +G PT P G+ + HP ++R
Sbjct: 272 --QHESFKKRANRRVADG-MPTEKRGGAPSGLKRLIENEPSLTITGAAIRELIHPTENRP 328
Query: 173 ITVRECARSQGFSDSYKFVGDIQHIIGRL 201
+T+RE AR Q F D + F G I ++
Sbjct: 329 LTIREAARIQTFPDDFIFCGTASQKIQQI 357
>gi|452204612|ref|YP_007484741.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
gi|452111668|gb|AGG07399.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
Length = 363
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 135 WKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+K ++GR+ W+ PT +T G HP +DR IT+RE A QG YKF G
Sbjct: 263 FKDVYGRMAWDRQAPT-ITSGCFNPSKGRFLHPEEDRAITMREAALLQGLPRKYKFRG 319
>gi|325279948|ref|YP_004252490.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712]
gi|324311757|gb|ADY32310.1| DNA-cytosine methyltransferase [Odoribacter splanchnicus DSM 20712]
Length = 359
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 85 HISKAMSELNLIRCQKIPKQPGS--DWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRL 142
H +SE+NL R +K P GS W+ D LP K + + ++GRL
Sbjct: 215 HTVSGLSEVNLKRLRKTPHDGGSRLAWK--------DDKELQLPCYVGKDHSFADVYGRL 266
Query: 143 DWEGNFPTS-VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF----VGDIQHI 197
W+ P+S +T G HP++DR +++RE A Q F Y F +G +
Sbjct: 267 KWDK--PSSTITTMFYKTSCGRFSHPDEDRGLSLREGATLQTFPLDYVFKAGSIGANARL 324
Query: 198 IG 199
IG
Sbjct: 325 IG 326
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDML--VLNDHISKAMS 91
+TV D +LP V G M++ + Y ++ FQKK G+ V+ +H + S
Sbjct: 204 VTVNDAFSNLPVVNQGEGAEKMKM--RNHYDND----FQKKCVGERNPGVIYNHRATRHS 257
Query: 92 ELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK---GLFGRLDWEGNF 148
+ R IP+ G + +LP E +K N +K L GR NF
Sbjct: 258 KAIQERYAMIPQ--GCNNSILPPEI-----------RTKKQNAYKLDLSLPGRT-VTCNF 303
Query: 149 PTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T + HP +R +TVRE AR Q F D Y F G++
Sbjct: 304 RTDL------------IHPVMNRGLTVREAARLQSFDDDYCFFGNL 337
>gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
Length = 365
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 135 WKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+K ++GR+ W+ PT +T G HP +DR IT+RE A QG YKF G
Sbjct: 263 FKDVYGRMAWDRQAPT-ITSGCFNPSKGRFLHPEEDRAITMREAALLQGLPRKYKFRG 319
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGA 29
MHVF G ELK+ L + YAAVRSTA GA
Sbjct: 236 MHVFAGSELKISLGSGTQYAAVRSTATGA 264
>gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 423
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG +WR LP +++ + N+ K G RL W+ T P C
Sbjct: 283 PGGNWRNLP----LEVQKKYMKNSFLKGGGRTGFAKRLSWDEPCLTITCSP-AQTQTERC 337
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP++ R +TVRE AR Q F D ++F G +
Sbjct: 338 -HPDETRPLTVREYARVQTFPDEWEFTGSL 366
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 1 MHVFTGPELKVKLARNSHYAAVRSTANGA 29
MHVF G ELK+ L + YAAVRSTA GA
Sbjct: 236 MHVFAGSELKISLGSGTQYAAVRSTATGA 264
>gi|452206973|ref|YP_007487095.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
gi|452083073|emb|CCQ36357.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
Length = 370
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H ++++SE NL R + + +PG DWR+ + + L+ C ++ + +K + R++
Sbjct: 218 HQARSLSEKNLERIRNM--KPGGDWRLWEEDGLTHLLADCHKKSSGR--SYKAPYSRMEP 273
Query: 145 EGNFPTSVTDPHPMGMVGTCFH--PNQDRIITVRECARSQGFSDSYKFVGDIQHI----I 198
+ PT T + G G H +QDR +++ E A Q F + Y F + + + +
Sbjct: 274 DKVAPTITTQFYNYGS-GRFGHYDTDQDRALSLLEGALLQTFPEDYDFYDEWEEVGVKNL 332
Query: 199 GRL 201
GRL
Sbjct: 333 GRL 335
>gi|354567856|ref|ZP_08987023.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
gi|353541530|gb|EHC10997.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
Length = 528
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGT 163
+PG WR LP V+L L + G + RL W+ PT VT HP
Sbjct: 365 KPGQYWRDLP----VELHKEALGASYHAGGGKTGFYRRLAWDKPSPTLVT--HPAMPATD 418
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP +DR ++++E R Q F D + G +
Sbjct: 419 LAHPEEDRPLSIQEYKRIQEFPDDWIIEGSL 449
>gi|240142603|ref|YP_002967116.1| hypothetical protein MexAM1_META2p0981 [Methylobacterium extorquens
AM1]
gi|418057959|ref|ZP_12695942.1| C-5 cytosine-specific DNA methylase [Methylobacterium extorquens
DSM 13060]
gi|240012550|gb|ACS43775.1| Hypothetical protein MexAM1_META2p0981 [Methylobacterium extorquens
AM1]
gi|373568532|gb|EHP94478.1| C-5 cytosine-specific DNA methylase [Methylobacterium extorquens
DSM 13060]
Length = 139
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 128 TAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDS 187
A+ N +GR+ W PT + +G G HP DR++TVRE A QGF
Sbjct: 17 AADVLNHHPDAYGRMAWSRPAPTIKRESSHVGN-GRYSHPELDRLLTVREMAALQGFPFD 75
Query: 188 YKFVGDIQH 196
Y+FV +++
Sbjct: 76 YRFVAALKN 84
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +T
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPT-IT 278
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
C HP R +++RE AR Q F D+Y+F G
Sbjct: 279 RNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYRFYG 317
>gi|420497421|ref|ZP_14995981.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25]
gi|420527745|ref|ZP_15026139.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25c]
gi|420530272|ref|ZP_15028656.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25d]
gi|393113700|gb|EJC14218.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25]
gi|393134871|gb|EJC35280.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25c]
gi|393135475|gb|EJC35871.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori Hp P-25d]
Length = 164
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 125 LPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGF 184
LP + + + + ++ WE PT +T C HP R +++RE AR Q F
Sbjct: 64 LPESLRPKSGYINTYAKMWWEKPAPT-ITRNFSTPSSSRCIHPRDSRALSIREGARLQSF 122
Query: 185 SDSYKFVG 192
D+Y+F G
Sbjct: 123 PDNYRFYG 130
>gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei]
Length = 1061
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 84 DHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLD 143
+H +SEL+ + +P+ G +W+ +P + +AE+ +GRL
Sbjct: 672 NHGEPTLSELDRLIISYVPE--GGNWQSIPETVPSQRLKQIREMSAERGVVRTTYYGRLR 729
Query: 144 WEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ T T + G GT HP DR +T RE AR Q F D Y F+G
Sbjct: 730 RDQPAYTISTYFNRPGN-GTHIHPVLDRTLTSREAARIQSFPDRYIFLG 777
>gi|23954253|emb|CAD42050.1| hypothetical protein [Escherichia coli]
Length = 233
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +S LNL R P+ G D R P E L+ C N ++ +GR+ W
Sbjct: 101 HRAGTLSPLNLKRIMHTPE--GGDRRNWPEE----LVNKCHKN----YDGHTDTYGRMSW 150
Query: 145 EGNFPTSVT--DPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKFVGDIQHIIGR 200
+ PT T + + G G HP+ Q R I++RE +R Q F SY F G + + +
Sbjct: 151 DKPAPTLTTKCNSYSNGRFG---HPDPTQHRAISIREASRLQTFPLSYVFKGSLNSMAKQ 207
Query: 201 L 201
+
Sbjct: 208 I 208
>gi|427723401|ref|YP_007070678.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355121|gb|AFY37844.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 401
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 36/173 (20%)
Query: 32 RAITVRDTIGDLPAVGNGASVTTMEVGFSSP--------YKSEPVLWFQKKIR---GDML 80
+A +V D I DLP + + +++ P Y+ EP +Q+K+R GD +
Sbjct: 200 KAFSVGDAISDLPELK--PIILSLKSKSRGPRQKDCDLLYRGEPESIYQQKMRRHNGDRV 257
Query: 81 VLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKV---VDLIPWCLPNTAEKHNQWKG 137
+H+ +A ++ +L K KQ G +R LP E + VD+ +
Sbjct: 258 --RNHLCRAHNDKDL-EIFKTLKQ-GGKYRDLPEEMMRYRVDI--------------FDD 299
Query: 138 LFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ RL W+ P+ H HP Q R I+VRE AR Q F D++ F
Sbjct: 300 KYHRLYWDK--PSWTLTAHMRKDCLAYIHPLQTRSISVREAARIQSFPDNFVF 350
>gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
Length = 340
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 135 WKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ ++GRL W+ +F T++T G HP QDR I+ RE + Q F +YKF
Sbjct: 249 FNDVYGRLRWD-DFSTTITGGCLNPSKGRFLHPEQDRCISAREASMLQSFPKTYKF 303
>gi|335030375|ref|ZP_08523867.1| putative modification methylase HpaII [Streptococcus infantis
SK1076]
gi|334266311|gb|EGL84791.1| putative modification methylase HpaII [Streptococcus infantis
SK1076]
Length = 515
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 136 KGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
K + RL+ PT VT P HP DR++TVRE AR Q F DS++F+G
Sbjct: 423 KSIRTRLNPNSVSPTIVTLPDDF------IHPYFDRVLTVREMARLQSFDDSFEFLG 473
>gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC
35316]
gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC
35316]
Length = 355
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 67 PVLWFQKKIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLP 126
PV + G + N H+ + ++ +N+ R + + +PG +P L P C
Sbjct: 206 PVPHIEAVKNGGPRLFNWHVIRTLTPINIERLKHV--KPGGPRYDIPDH----LRPDC-- 257
Query: 127 NTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSD 186
K+ + ++GR+D+ PT +T + G HP + R I+VRE AR Q F D
Sbjct: 258 -HKGKNKGYSNVYGRMDFNSVSPT-ITCGCTVLSKGRFGHPTELRTISVREAARLQTFPD 315
Query: 187 SY----KFVGDIQHIIG 199
+ F+ D IIG
Sbjct: 316 HFDIATSFIDDACRIIG 332
>gi|339641067|ref|ZP_08662511.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. oral taxon
056 str. F0418]
gi|339454336|gb|EGP66951.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. oral taxon
056 str. F0418]
Length = 357
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H S+ +S LN+ R ++ +PG W+ E +++ + + ++GRL+W
Sbjct: 214 HRSRKLSPLNMKRIKQ--SKPGGTWKDWDEELLLEAY------KKDTGKSYSSVYGRLEW 265
Query: 145 EGNFPTS-VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
+ P+S +T P G HP Q+R +++RE A Q F Y+F
Sbjct: 266 DK--PSSTITTQFPGIGNGRFGHPEQNRALSLREGALLQTFPMDYQF 310
>gi|374709818|ref|ZP_09714252.1| site-specific DNA-methyltransferase [Sporolactobacillus inulinus
CASD]
Length = 466
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 100 KIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMG 159
KIP+ G +WR L E + N G F RLD+ PT +T +P+
Sbjct: 307 KIPE--GGNWRSLSIEDQKK----AMGNAYNSSGGKSGFFRRLDFNKVSPTLLT--NPLM 358
Query: 160 MVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP + R +++ E +R QGF D + F G I
Sbjct: 359 KATDLVHPTELRPLSIEEYSRIQGFPDDWHFCGKI 393
>gi|194099466|ref|YP_002002586.1| modification methylase [Neisseria gonorrhoeae NCCP11945]
gi|385336433|ref|YP_005890380.1| modification methylase [Neisseria gonorrhoeae TCDC-NG08107]
gi|193934756|gb|ACF30580.1| Modification methylase [Neisseria gonorrhoeae NCCP11945]
gi|317164976|gb|ADV08517.1| Modification methylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 123
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
K N +K FGRL W+ PT T + G HP +DR +++RE A Q F +Y F
Sbjct: 31 KDNSFKDTFGRLWWDKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVF 89
Query: 191 VGDIQHIIGRL 201
+ I RL
Sbjct: 90 KAGSRDKIARL 100
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+ V+D +G+L + SS +P ++K +R + +H + +++
Sbjct: 190 VLVKDALGELYELEEQMGKNRSNYFLSS----KPDSSYRKYLRNSKNSIENHEIRYPAKI 245
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
R +P+ G +WR +P PN + N+ + RLD E T T
Sbjct: 246 QQDRIACVPQ--GGNWRDIPES--------YFPNN--RKNRHSSAYKRLDEEDVSVTIDT 293
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
T FH RI TVRE AR Q F+D + F G
Sbjct: 294 GNAHSNYFHTIFH----RIPTVREAARLQSFNDDFIFYG 328
>gi|240016882|ref|ZP_04723422.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
gonorrhoeae FA6140]
gi|421541268|ref|ZP_15987395.1| modification methylase [Neisseria meningitidis 93004]
gi|421545335|ref|ZP_15991399.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM140]
gi|421547382|ref|ZP_15993420.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM183]
gi|421549419|ref|ZP_15995433.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM2781]
gi|421551530|ref|ZP_15997519.1| modification methylase [Neisseria meningitidis 69166]
gi|421553590|ref|ZP_15999550.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM576]
gi|421555266|ref|ZP_16001201.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
98008]
gi|421557984|ref|ZP_16003879.1| modification methylase [Neisseria meningitidis 80179]
gi|421562042|ref|ZP_16007879.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM2657]
gi|421564109|ref|ZP_16009919.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM2795]
gi|421567099|ref|ZP_16012835.1| modification methylase [Neisseria meningitidis NM3001]
gi|433468011|ref|ZP_20425459.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 87255]
gi|433470152|ref|ZP_20427558.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 98080]
gi|433470895|ref|ZP_20428289.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 68094]
gi|433474337|ref|ZP_20431691.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97021]
gi|433476442|ref|ZP_20433774.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 88050]
gi|433478567|ref|ZP_20435874.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 70012]
gi|433480437|ref|ZP_20437718.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63041]
gi|433482768|ref|ZP_20440020.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2006087]
gi|433484782|ref|ZP_20441997.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2002038]
gi|433487013|ref|ZP_20444201.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97014]
gi|433493452|ref|ZP_20450534.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM586]
gi|433495500|ref|ZP_20452560.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM762]
gi|433497571|ref|ZP_20454597.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis M7089]
gi|433499615|ref|ZP_20456619.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis M7124]
gi|433501682|ref|ZP_20458662.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM174]
gi|433503758|ref|ZP_20460712.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM126]
gi|433514331|ref|ZP_20471114.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63049]
gi|433516527|ref|ZP_20473287.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2004090]
gi|433518534|ref|ZP_20475270.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 96023]
gi|433520698|ref|ZP_20477407.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 65014]
gi|433522704|ref|ZP_20479386.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 61103]
gi|433523704|ref|ZP_20480369.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97020]
gi|433527007|ref|ZP_20483626.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 69096]
gi|433529114|ref|ZP_20485720.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM3652]
gi|433531289|ref|ZP_20487867.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM3642]
gi|433532761|ref|ZP_20489325.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2007056]
gi|433535420|ref|ZP_20491946.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2001212]
gi|433539775|ref|ZP_20496240.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 70030]
gi|433541888|ref|ZP_20498327.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63006]
gi|402315724|gb|EJU51286.1| modification methylase [Neisseria meningitidis 93004]
gi|402321412|gb|EJU56887.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM140]
gi|402321745|gb|EJU57218.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM183]
gi|402323409|gb|EJU58853.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM2781]
gi|402327146|gb|EJU62539.1| modification methylase [Neisseria meningitidis 69166]
gi|402327902|gb|EJU63287.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM576]
gi|402331048|gb|EJU66390.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
98008]
gi|402333241|gb|EJU68549.1| modification methylase [Neisseria meningitidis 80179]
gi|402336427|gb|EJU71688.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM2657]
gi|402339175|gb|EJU74394.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
NM2795]
gi|402344110|gb|EJU79251.1| modification methylase [Neisseria meningitidis NM3001]
gi|432201119|gb|ELK57205.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 98080]
gi|432201206|gb|ELK57290.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 87255]
gi|432207655|gb|ELK63644.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97021]
gi|432207887|gb|ELK63874.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 88050]
gi|432210343|gb|ELK66303.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 68094]
gi|432213093|gb|ELK69021.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 70012]
gi|432213714|gb|ELK69624.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63041]
gi|432214239|gb|ELK70144.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2006087]
gi|432219488|gb|ELK75333.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2002038]
gi|432220272|gb|ELK76096.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97014]
gi|432225908|gb|ELK81645.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM586]
gi|432227880|gb|ELK83585.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM762]
gi|432231820|gb|ELK87477.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis M7089]
gi|432232685|gb|ELK88322.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis M7124]
gi|432233181|gb|ELK88814.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM174]
gi|432238385|gb|ELK93952.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM126]
gi|432245819|gb|ELL01284.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63049]
gi|432250945|gb|ELL06321.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2004090]
gi|432251314|gb|ELL06684.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 96023]
gi|432251510|gb|ELL06875.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 65014]
gi|432257668|gb|ELL12965.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 61103]
gi|432258296|gb|ELL13583.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 69096]
gi|432260603|gb|ELL15861.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 97020]
gi|432263738|gb|ELL18951.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM3652]
gi|432264166|gb|ELL19374.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis NM3642]
gi|432267277|gb|ELL22457.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2007056]
gi|432269367|gb|ELL24527.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 2001212]
gi|432271108|gb|ELL26237.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 70030]
gi|432275317|gb|ELL30392.1| C-5 cytosine-specific DNA methylase family protein [Neisseria
meningitidis 63006]
Length = 109
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
K N +K FGRL W+ PT T + G HP +DR +++RE A Q F +Y F
Sbjct: 17 KDNSFKDTFGRLWWDKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVF 75
Query: 191 VGDIQHIIGRL 201
+ I RL
Sbjct: 76 KAGSRDKIARL 86
>gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536]
gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11]
gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|386606922|ref|YP_006113222.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|422366411|ref|ZP_16446879.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|422377725|ref|ZP_16457960.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|432443967|ref|ZP_19686287.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|432444295|ref|ZP_19686608.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|432454611|ref|ZP_19696824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|432469689|ref|ZP_19711743.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|432516593|ref|ZP_19753803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|432571672|ref|ZP_19808168.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|432653865|ref|ZP_19889596.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|432701721|ref|ZP_19936859.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|432716220|ref|ZP_19951239.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|432748179|ref|ZP_19982835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|432988209|ref|ZP_20176908.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|432993425|ref|ZP_20182049.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|433012735|ref|ZP_20201117.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|433022308|ref|ZP_20210333.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|433061115|ref|ZP_20248102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|433076824|ref|ZP_20263389.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|433100073|ref|ZP_20286184.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|433118431|ref|ZP_20304182.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|433142922|ref|ZP_20328102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|433197111|ref|ZP_20381039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|433327076|ref|ZP_20403659.1| DNA-cytosine methyltransferase [Escherichia coli J96]
gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536]
gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11]
gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|430960119|gb|ELC78286.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|430977377|gb|ELC94218.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|430986963|gb|ELD03525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|431000237|gb|ELD16305.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|431036777|gb|ELD47766.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|431113151|gb|ELE16832.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|431186073|gb|ELE85648.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|431238754|gb|ELF33409.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|431249948|gb|ELF44102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|431288452|gb|ELF79215.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|431491428|gb|ELH71034.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|431512402|gb|ELH90526.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|431535562|gb|ELI11902.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|431540917|gb|ELI16370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|431562253|gb|ELI35566.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|431600852|gb|ELI70517.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|431622501|gb|ELI91191.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|431626909|gb|ELI95324.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|431666881|gb|ELJ33505.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|431725573|gb|ELJ89421.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|432345091|gb|ELL39614.1| DNA-cytosine methyltransferase [Escherichia coli J96]
Length = 348
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW 144
H + +S LNL R P+ G D R P E L+ C N ++ +GR+ W
Sbjct: 216 HRAGTLSPLNLKRIMHTPE--GGDRRNWPEE----LVNKCHKN----YDGHTDTYGRMSW 265
Query: 145 EGNFPTSVT--DPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKFVGDI----QH 196
+ PT T + + G G HP+ Q R I++RE +R Q F SY F G + +
Sbjct: 266 DKPAPTLTTKCNSYSNGRFG---HPDPTQHRAISIREASRLQTFPLSYVFKGSLNSMAKQ 322
Query: 197 IIGRLEMLFHLLWRLHWGEN 216
I + L+ LH EN
Sbjct: 323 IGNAVPCELARLFGLHLIEN 342
>gi|336406404|ref|ZP_08587059.1| hypothetical protein HMPREF0127_04372 [Bacteroides sp. 1_1_30]
gi|335934608|gb|EGM96593.1| hypothetical protein HMPREF0127_04372 [Bacteroides sp. 1_1_30]
Length = 419
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 20/161 (12%)
Query: 38 DTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELNLIR 97
D DLP G T V + +P Q K+R + HI++ + ++L
Sbjct: 240 DLFSDLPERQQGEGSLTDIVQYVAPATG---YLQQSKVRNSLDFTTQHIARPHNLIDL-- 294
Query: 98 CQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGR---LDWEGNFPTSVTD 154
+I K+ W EK L LP +KHN + R ++ EG T V
Sbjct: 295 --EIYKRAIKLW----LEKKARLNYADLPPELQKHNNKQAFLNRFQVVNHEGCCHTVVAH 348
Query: 155 PHPMGMVGTCF-HPN--QDRIITVRECARSQGFSDSYKFVG 192
+ M G + +P+ Q R ITVRE AR Q F D Y F G
Sbjct: 349 ---IAMDGHYYIYPSLKQIRSITVREAARIQSFPDDYYFEG 386
>gi|421538984|ref|ZP_15985156.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
93003]
gi|402315691|gb|EJU51254.1| cytosine specific DNA methyltransferase [Neisseria meningitidis
93003]
Length = 121
Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
K N +K FGRL W+ PT T + G HP +DR +++RE A Q F +Y F
Sbjct: 17 KDNSFKDTFGRLWWDKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVF 75
Query: 191 VGDIQHIIGRL 201
+ I RL
Sbjct: 76 KAGSRDKIARL 86
>gi|420478963|ref|ZP_14977615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393096518|gb|EJB97116.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 351
Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 182 FSLKDALGDLPPIQSG------ENGDALGYLKNADNVFLEFVRNSK-ELSEHSSPKNNE- 233
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
LI+ + K S LP + + + ++ WE PT +
Sbjct: 234 KLIKIMQTLKDGQSKDD--------------LPENLRPKSGYINTYAKMWWEKPAPTIIR 279
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ C HP R +++RE AR Q F D+YKF G
Sbjct: 280 N-FSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|406674965|ref|ZP_11082157.1| DNA (cytosine-5-)-methyltransferase [Aeromonas veronii AMC35]
gi|404628473|gb|EKB25255.1| DNA (cytosine-5-)-methyltransferase [Aeromonas veronii AMC35]
Length = 358
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 119 DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
DL P C N K LFGRL W+ T T+ G HP+QDR IT RE
Sbjct: 255 DLTPACWLN---KPAGGTDLFGRLWWDRPSVTIRTEFF-KPEKGRYLHPDQDRAITHREA 310
Query: 179 ARSQGFSDSYKFVG 192
AR F D+Y FVG
Sbjct: 311 ARLMTFPDNYIFVG 324
>gi|386336990|ref|YP_006033159.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|334279626|dbj|BAK27200.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 516
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 119 DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
DL P + K K + RLD PT VT P HP +R++TVRE
Sbjct: 411 DLTPAAIEAIFTK----KSIRVRLDQNTVSPTMVTLPD------DYIHPFFNRVLTVREM 460
Query: 179 ARSQGFSDSYKFVG 192
AR Q F DS++F+G
Sbjct: 461 ARLQSFDDSFEFLG 474
>gi|240014437|ref|ZP_04721350.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
gonorrhoeae DGI18]
gi|240120959|ref|ZP_04733921.1| modification methylase (cytosine-specific DNA methylase) [Neisseria
gonorrhoeae PID24-1]
Length = 109
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 131 KHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
K N +K FGRL W+ PT T + G HP +DR +++RE A Q F +Y F
Sbjct: 17 KDNSFKDTFGRLWWDKPAPTITTKFFSISN-GRFAHPEEDRALSLREGATLQSFPRNYVF 75
Query: 191 VGDIQHIIGRL 201
+ I RL
Sbjct: 76 KAGSRDKIARL 86
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 154 DPHPMGMVGTCF------HPNQDRIITVRECARSQGFSDSYKFVGDIQHI 197
DP+ + T F HP ++R IT RE AR QGF D+++F+G + I
Sbjct: 63 DPNKPSLTVTAFIFNKFVHPFENRFITTREAARLQGFPDNFEFIGSLTSI 112
>gi|422877271|ref|ZP_16923741.1| C-5 cytosine-specific DNA methylase superfamily protein
[Streptococcus sanguinis SK1056]
gi|332359910|gb|EGJ37724.1| C-5 cytosine-specific DNA methylase superfamily protein
[Streptococcus sanguinis SK1056]
Length = 516
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 119 DLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVREC 178
DL P + K K + RLD PT VT P HP +R++TVRE
Sbjct: 411 DLTPAAIEAIFTK----KSIRVRLDQNTISPTMVTLPD------DYIHPFFNRVLTVREM 460
Query: 179 ARSQGFSDSYKFVG 192
AR Q F DS++F+G
Sbjct: 461 ARLQSFDDSFEFLG 474
>gi|409910991|ref|YP_006889456.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
Length = 428
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TVRD I DLP EPV ++R + L+ H + + +
Sbjct: 239 TVRDAISDLP---------------------EPV---GTEVRDAIPPLDLHFGRTPTPTS 274
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
+ R + IP++ + + + L P C K + LFGRL W+ T T+
Sbjct: 275 IARYKAIPEEGMNRFDL--QRFAPHLTPACW---IRKTSGGTDLFGRLWWDRPSVTIRTE 329
Query: 155 PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
G HP Q+R IT RE AR Q F D + F+G
Sbjct: 330 FF-KPEKGRYLHPVQNRPITHREAARLQSFPDDFTFLG 366
>gi|383935270|ref|ZP_09988707.1| DNA (cytosine-5-)-methyltransferase [Rheinheimera nanhaiensis
E407-8]
gi|383703686|dbj|GAB58798.1| DNA (cytosine-5-)-methyltransferase [Rheinheimera nanhaiensis
E407-8]
Length = 473
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 104 QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGT 163
+ G +W+ LP +DL + + G RL W PT VT HP
Sbjct: 315 KAGENWKSLP----IDLQKEAMGKSFYSGGGKTGFLRRLAWNKPSPTLVT--HPAMPATD 368
Query: 164 CFHPNQDRIITVRECARSQGFSDSYKFVG 192
HP +DR ++V+E R Q F D ++ G
Sbjct: 369 LAHPEEDRPLSVQEYKRIQEFPDKWQLAG 397
>gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47FAA]
Length = 554
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEP-VLWFQKKIRGDMLVLNDHISKAMSEL 93
TV D I D+ + + VT G ++ P +K++RG L +HI+ A E
Sbjct: 383 TVHDAIADIQDITSVTEVT----GDYIELEAHPNATGLEKELRGRALY--NHITTATRET 436
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVT 153
+ R + + + G ++ DL P + ++ RL + T V
Sbjct: 437 AMARFKAL--KAGENFH--------DLDPELKTTYSNADRTQNTIYMRLKYNEPSGTVVN 486
Query: 154 DPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
M + HP DR I++RE AR Q F DS+ F G
Sbjct: 487 VRKSMWI-----HPELDRAISIREAARLQTFPDSFIFEG 520
>gi|417073948|ref|ZP_11950287.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus MTCC
5462]
gi|328463177|gb|EGF34918.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus MTCC
5462]
Length = 240
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV + DLP + G + K++P + + +R L ++++ EL+
Sbjct: 66 TVGELFRDLPKLKAGETCNKYS-------KAQPCAFVVENLRTPASKLTQNVARPNRELD 118
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + KI + + ++L LP + HN K R S T
Sbjct: 119 L-KIYKIAAEKRAKHKILHYND--------LPEDLQTHNNKKAFLDRFKAVPADGVSQTV 169
Query: 155 PHPMGMVGTCF-HPN--QDRIITVRECARSQGFSDSYKFVG 192
+ G + HP+ Q+R ITVRE AR Q F D + F+G
Sbjct: 170 VAHIAKDGHYYIHPDVEQNRSITVREAARIQTFPDDFYFMG 210
>gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
Length = 350
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 82 LNDHISKAMSELN-LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFG 140
L+D I K ++ +IR +PK GS + LP + LP + + ++ ++G
Sbjct: 209 LHDFIPKRTDKIKEMIR--HVPKDGGS-RKDLPRN-------FWLPCHLKNSDGYRDVYG 258
Query: 141 RLDWEGNFPT---SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKF 190
R+ W+ PT T+P G HP QDR IT+RE A Q F +Y F
Sbjct: 259 RMSWDKVSPTITGGCTNPSK----GRFLHPEQDRAITLREAAILQTFPKNYIF 307
>gi|451981070|ref|ZP_21929447.1| Cytosine-specific methyltransferase (fragment), partial [Nitrospina
gracilis 3/211]
gi|451761673|emb|CCQ90694.1| Cytosine-specific methyltransferase (fragment), partial [Nitrospina
gracilis 3/211]
Length = 242
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 133 NQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
N + G F R+ W+ P++ D G HP + R T+RE AR QGF D++ F G
Sbjct: 155 NTFNGKFRRMSWDE--PSNTVDTR-FGESKYYLHPEEHRGFTIREAARIQGFPDTFIFEG 211
>gi|422323971|ref|ZP_16405008.1| hypothetical protein HMPREF0737_00118 [Rothia mucilaginosa M508]
gi|353344764|gb|EHB89065.1| hypothetical protein HMPREF0737_00118 [Rothia mucilaginosa M508]
Length = 440
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG W+ LP E D + + K G+ RL W+ P+ P
Sbjct: 288 PGGYWKDLPDEVQRDYLGGSYHLSGGK----TGMARRLSWDE--PSLTLTCSPAQKQTER 341
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL------EMLFHL 207
HP + R +TVRE AR Q F+D ++F G I ++ M FH+
Sbjct: 342 CHPEETRPLTVREYARIQSFADDWEFSGSIAQQYKQIGNAVPANMAFHI 390
>gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
Length = 370
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 66/176 (37%), Gaps = 30/176 (17%)
Query: 27 NGAPFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI 86
N + F +TV D I LP + P +Q+ + L +H
Sbjct: 200 NPSFFDDVTVGDAIAGLPMPSEDGMIEN----------PRPCNRYQEYLCSKNDTLTNHK 249
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG 146
+ +E + R ++I Q G +W L E + G +GR+ W+
Sbjct: 250 ATIHTETAVGRMRQI--QKGQNWTSLEEEI---------------RSVHSGSYGRMSWDE 292
Query: 147 NFPTSVTD-PHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
T T P G G HP ++R IT RE AR Q F D + F G I ++
Sbjct: 293 PSATITTRFDTPSG--GRFTHPEENRTITPREAARIQSFPDDFVFYGSKSSICKQI 346
>gi|384567932|ref|ZP_10015036.1| DNA-methyltransferase Dcm [Saccharomonospora glauca K62]
gi|384523786|gb|EIF00982.1| DNA-methyltransferase Dcm [Saccharomonospora glauca K62]
Length = 397
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 85 HISKAMSE-LNLIRCQKIPKQPGSDWRVLP-SEKVVDLIPWCLPNTAE--KHNQWKGLFG 140
H+S + +L R + IP+ GS WR L S++ + + E K + ++G
Sbjct: 234 HVSPTFRKSTSLKRLKAIPRDGGS-WRDLTRSKRTRRFMTPVMRRLEEAGKFGSFPDVYG 292
Query: 141 RLDWEGNFPTSVTDPHPMGMVGT--CFHPNQDRIITVRECARSQGFSDSYKFVGDIQH 196
RL W+ SVT VG HP QDR+ TVRE A QGF Y F G + +
Sbjct: 293 RLWWDR---PSVTIKRECSHVGNGRYAHPEQDRLCTVREMAILQGFPADYVFEGSVNN 347
>gi|403386149|ref|ZP_10928206.1| Modification methylase [Kurthia sp. JC30]
Length = 458
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 37/225 (16%)
Query: 4 FTGPELKVKLARNSH---YAAVRSTANGAPFRAITVRDTIGDLPAVGNGASVTTME-VGF 59
F G +L ++ R + YA + N F A VR + + E +G+
Sbjct: 166 FAGKKLGLEDTRGTMFYWYAQLLKQLNPKMFLAENVRGLVSHEKGATLQGMIDVFESMGY 225
Query: 60 SSPYKSEPVLWF---QKK-------IRGDMLVLNDHISKAMSELNLIR------CQKIPK 103
S YK + QK+ +R D++ + I + L + + +P
Sbjct: 226 SVKYKVLKATDYNVAQKRERIFIIGVRKDLITDENSIEFQFPKPQLYKPVLKDVLKNVPD 285
Query: 104 QPGSDWRVLPSEKVVDLIP--WC---LPNTAEKHNQWK---------GLFGRLDWEGNFP 149
PG + E ++D++P C LP +K K G+ R+ W+
Sbjct: 286 SPGKKYPQRKKE-IMDMVPPGGCWRDLPLEVQKEYMKKSFYLGGGKTGMARRISWDEPCL 344
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
T T P M C HP++ R TVRE AR Q F DS+ F G I
Sbjct: 345 TLTTAPD-MKQTERC-HPDETRPFTVREYARIQSFPDSWIFTGPI 387
>gi|116750223|ref|YP_846910.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116699287|gb|ABK18475.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 399
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 74 KIRGDMLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHN 133
+IR + + H + + +L R IP++ + + + ++ DL P C +K
Sbjct: 239 EIREEPPPYDLHFGRTPTPKSLKRYMAIPEEGMNRFDL--QKRAPDLTPECW---IKKTT 293
Query: 134 QWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
LFGRL W+ T T+ G HP + R IT RE AR Q F D ++F+G
Sbjct: 294 GGTDLFGRLWWDRPGVTVRTEFF-KPEKGRYLHPEEHRPITHREAARIQSFPDDFRFLG 351
>gi|229552043|ref|ZP_04440768.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|258539457|ref|YP_003173956.1| cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc
705]
gi|385835105|ref|YP_005872879.1| DNA (cytosine-5-)-methyltransferase family protein [Lactobacillus
rhamnosus ATCC 8530]
gi|229314620|gb|EEN80593.1| DNA-cytosine methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|257151133|emb|CAR90105.1| Cytosine-specific methyltransferase [Lactobacillus rhamnosus Lc
705]
gi|355394596|gb|AER64026.1| DNA (cytosine-5-)-methyltransferase family protein [Lactobacillus
rhamnosus ATCC 8530]
Length = 415
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 35 TVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSELN 94
TV + DLP + G + K++P + + +R L ++++ EL+
Sbjct: 241 TVGELFRDLPKLKAGETCNKYS-------KAQPCAFVVENLRTPASKLTQNVARPNRELD 293
Query: 95 LIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTD 154
L + KI + + ++L LP + HN K R S T
Sbjct: 294 L-KIYKIAAEKRAKHKILHYND--------LPEDLQTHNNKKAFLDRFKAVPADGVSQTV 344
Query: 155 PHPMGMVGTCF-HPN--QDRIITVRECARSQGFSDSYKFVG 192
+ G + HP+ Q+R ITVRE AR Q F D + F+G
Sbjct: 345 VAHIAKDGHYYIHPDVEQNRSITVREAARIQTFPDDFYFMG 385
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 357
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 34 ITVRDTIGDLPAVGN--GASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMS 91
IT + I DLP + + G+ V+T Y EP +Q+K+R + VL +H+ A++
Sbjct: 194 ITCKQAISDLPPLVDELGSEVST--------YCEEPETEYQRKMRKNCDVLYNHV--AVN 243
Query: 92 ELNLIRCQKIPKQP-GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPT 150
+ ++ Q I + P G +++ LP + + H W + N P+
Sbjct: 244 HKDFVK-QVISQVPDGGNYKDLPEG---------VGTSRNFHMAW------TRYASNKPS 287
Query: 151 SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGD 193
D FH +R TVRE AR Q F D + F G+
Sbjct: 288 RTIDTGHRNN----FHYKWNRCPTVRESARLQSFPDDFVFTGN 326
>gi|420499031|ref|ZP_14997588.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-26]
gi|393153010|gb|EJC53306.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-26]
Length = 191
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
++++D +GDLP + +G E G + Y F + +R L++H S +E
Sbjct: 21 LSLKDALGDLPPIQSG------ENGDALGYLKNADNIFLEFVRNSK-ELSEHSSPKNNE- 72
Query: 94 NLIRCQKIPK--QPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTS 151
LI+ + K Q D LP + + + + ++ WE PT
Sbjct: 73 KLIKIMQTLKDGQSKDD----------------LPESLRPKSGYINTYAKMWWEKPAPT- 115
Query: 152 VTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+T C HP R +++RE AR Q D+YKF G
Sbjct: 116 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSSPDNYKFYG 156
>gi|212555196|gb|ACJ27650.1| Site-specific DNA-methyltransferase [Shewanella piezotolerans WP3]
Length = 475
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 80 LVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLF 139
L +DH++ L R G +W+ LP E + + + K G
Sbjct: 297 LTSHDHLTFPEKRLKYYRML----SAGQNWKNLPIETQKEAMGKSFYSGGGK----TGFL 348
Query: 140 GRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVGDI 194
RL W+ PT VT HP HP +DR ++V+E R Q F DS+ G I
Sbjct: 349 RRLGWDKPSPTLVT--HPAMPATDLAHPVEDRPLSVQEYKRIQEFPDSWDLAGPI 401
>gi|344341424|ref|ZP_08772344.1| C-5 cytosine-specific DNA methylase [Thiocapsa marina 5811]
gi|343798759|gb|EGV16713.1| C-5 cytosine-specific DNA methylase [Thiocapsa marina 5811]
Length = 427
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 85 HISKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVD-----LIPWCLPNTAEKHNQWKGLF 139
H+S M++ L R IP GS W L + D + C+ A ++
Sbjct: 241 HVSPGMNDATLARLHAIPVDGGS-WIDLRDHRDADRLMTPAMKRCV--AARDFGSHPDVY 297
Query: 140 GRLDWEGNFPTSVTDPHPMGMVGT--CFHPNQDRIITVRECARSQGFSDSYKFVG 192
GR+ W N P +VT VG HP Q R+ T+RE A QGF + ++F G
Sbjct: 298 GRMAW--NRP-AVTIKRECAHVGNGRYSHPEQHRLCTLRELALLQGFPEQFRFGG 349
>gi|400975521|ref|ZP_10802752.1| DNA-methyltransferase Dcm [Salinibacterium sp. PAMC 21357]
Length = 458
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 130 EKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYK 189
+KH+Q LDW T VT P HP++ RI TVRE AR QGF D ++
Sbjct: 368 KKHSQKA-----LDWSQPARTVVTLPD------DYVHPSEPRIFTVREMARFQGFPDDFE 416
Query: 190 FVGDIQHIIGRLEMLFHL 207
F G + G L F +
Sbjct: 417 FRG--KETTGSLRRRFEV 432
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
+++ + IGDLP + N T V Y EP FQ+ +R L + +H + S
Sbjct: 198 LSIMEAIGDLPII-NACEGTDNLV----QYSLEPQNDFQQAMRNGSLGVYNHEAMKHSAR 252
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK------GLFGRLDWEGN 147
+ R I QPG L + K D P T K N + L +W+ +
Sbjct: 253 IVERFATI--QPGGSGYKLGTVKGKDA-----PETVYKSNNQRLISDQPALCITANWQSS 305
Query: 148 FPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
+ HP +R +TVRE AR Q F DSY F G
Sbjct: 306 Y----------------IHPLLNRNLTVREAARIQTFPDSYVFKG 334
>gi|389689249|ref|ZP_10178587.1| DNA-methyltransferase Dcm [Microvirga sp. WSM3557]
gi|388590160|gb|EIM30445.1| DNA-methyltransferase Dcm [Microvirga sp. WSM3557]
Length = 375
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 36/162 (22%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKA 89
P +TV +TIG LP + GAS ++P+ H +
Sbjct: 210 PDEYVTVEETIGGLPKLTAGASDP-----------NDPL----------------HSASR 242
Query: 90 MSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFP 149
MS+LNL R + +PG W E L+ C + + ++GR+ + P
Sbjct: 243 MSDLNLRRIRA--SRPGGTWLDWDEE----LVASC--HKVATGRGYMSVYGRMRADEPSP 294
Query: 150 TSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFV 191
T +T G HP QDR +++RE A Q F SY F+
Sbjct: 295 T-ITTQFFGFGNGRFGHPIQDRALSLREGAMLQSFPKSYAFL 335
>gi|328947611|ref|YP_004364948.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447935|gb|AEB13651.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 391
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 113 PSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF----HPN 168
P + + DL E+ + + L ++ + N+ ++P P + C HP
Sbjct: 266 PGDSLKDLFDRYEGAEREELQKQRILPKKMFIKRNYRLVSSEPSPT-VTSHCLDEFVHPK 324
Query: 169 QDRIITVRECARSQGFSDSYKFVG 192
+R +TVRECAR Q F DSY F G
Sbjct: 325 YNRALTVRECARLQSFPDSYDFCG 348
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 44/175 (25%)
Query: 30 PFRAITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDH-ISK 88
PF ++ +++GDLP V +G +P+L Q DH +
Sbjct: 841 PFAQVSAEESVGDLPVVFDG----------------QPLLCPQ---------FPDHRTAT 875
Query: 89 AMSELNLIRCQKIPKQP-GSDWRVLPSEKVVDLIPWCLPNTAEKHNQWK-----GLFGRL 142
+ +N R +PK+P G + +V P N HNQ + + R+
Sbjct: 876 EETVINRDRIAAVPKRPFGMSLKRAALAGLVRGEPLDFSN---GHNQIRCGPNSNSYRRI 932
Query: 143 DWEGNFPT-----SVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
FPT SVTD G+ G H N+DR++T+ E R+QG D VG
Sbjct: 933 FPNRPFPTIITMISVTD----GIAGQVVHWNEDRVLTIMETRRAQGLPDDEVLVG 983
>gi|380483902|emb|CCF40335.1| cytosine-specific methyltransferase [Colletotrichum higginsianum]
Length = 1246
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 124 CLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPM-GMVGTCFHPNQDRIITVRECARSQ 182
C P+ + N+ FGR+ T T P +G H NQ+R +TV E R+Q
Sbjct: 1012 CFPDRGRRVNKGSRAFGRVKPSDPMHTITTKSQPSDSSIGKILHWNQNRPLTVMEARRAQ 1071
Query: 183 GFSDSYKFVG---DIQHIIG 199
GF D+ +G D IIG
Sbjct: 1072 GFRDNDIILGNPVDQYQIIG 1091
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 415
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 30 PFRA---ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHI 86
P+R TV I DLP + NG + +P + + + + + VL DH
Sbjct: 231 PYRTSTLTTVAQAIEDLPVINNGEH---WKGNNYNPVANGYITMMRSFMNNN--VLFDHF 285
Query: 87 SKAMSELNLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEG 146
+ E L R + IP+ G +W K + I N + H+ ++ RL +
Sbjct: 286 TTNHQEYVLERFRNIPE--GENW------KSIKNIMNTYKNVNKTHS---NIYRRL--QR 332
Query: 147 NFPTSVTDPHPMGMVGTCFHPNQDRIITVRECARSQGFSDSYKFVG 192
N P+ + M HP Q+R ++ RE R Q F D Y+F G
Sbjct: 333 NAPSHTISHYRKAMT---IHPVQNRGLSFREACRLQSFPDWYRFSG 375
>gi|340750922|ref|ZP_08687751.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|229421173|gb|EEO36220.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 407
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 34 ITVRDTIGDLPAVGNGASVTTMEVGFSSPYKSEPVLWFQKKIRGDMLVLNDHISKAMSEL 93
IT+ DLP + G ++ F VL + D +++ HIS+ + +
Sbjct: 231 ITINQLFADLPKIKAGE-----KINFKKIVPQIEVLSKLNLLDDDFNIISQHISRP-NNI 284
Query: 94 NLIRCQKIPKQPGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDW-EGNFPTSV 152
N ++ KI S+ + L K DL P++ H R GN +
Sbjct: 285 NDLKIYKIAVNLFSEGKTL---KYTDL-----PSSLISHKNLTSFLDRFKVVNGNGISHT 336
Query: 153 TDPHPMGMVGTCFHPN--QDRIITVRECARSQGFSDSYKF 190
H HP+ Q+R +TVRE AR Q F DSY F
Sbjct: 337 MVAHIAKDGHYYIHPDIRQNRSLTVREAARIQTFPDSYYF 376
>gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842]
gi|423371042|ref|ZP_17348382.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842]
gi|401102868|gb|EJQ10853.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
Length = 468
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 110 RVLPSEK-----VVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
R+LP EK + D++P+ ++ +K F +L+ + P+ H
Sbjct: 351 RLLPGEKSDAKSIQDIMPY-----KSRNEIFKDKFYKLEPQK--PSKTITAHMYYDCHMY 403
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVG 192
HP Q R +T RE AR QGF D+Y F+G
Sbjct: 404 IHPYQARGLTPREAARIQGFPDNYYFLG 431
>gi|410454355|ref|ZP_11308294.1| Modification methylase [Bacillus bataviensis LMG 21833]
gi|409932170|gb|EKN69137.1| Modification methylase [Bacillus bataviensis LMG 21833]
Length = 454
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 105 PGSDWRVLPSEKVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTC 164
PG WR LP V+L + + G+ R+ W+ T T P M C
Sbjct: 313 PGGYWRDLP----VELQKEYMKGSFYLGGGKTGMARRISWDEPCLTLTTAPD-MKQTERC 367
Query: 165 FHPNQDRIITVRECARSQGFSDSYKFVGDI 194
HP++ R TVRE AR Q F DS+ F G +
Sbjct: 368 -HPDETRPFTVREYARIQSFPDSWSFEGSM 396
>gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus]
Length = 429
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 62 PY-KSEPVLWFQKKIRGD--MLVLNDHISKAMSELNLIRCQKIPKQPGSDWRVLPSE--- 115
PY SEPV F ++R + V+ H+ +E R Q +PG + LP E
Sbjct: 221 PYASSEPVNAFDARMRAGNRVEVVTHHVRVEAAE----RMQVELLKPGQTMKDLPPELWH 276
Query: 116 ---------KVVDLIPWCLPNTAEKHNQWKGLFGRLDWEGNFPTSVTDPHPMGMVGTCF- 165
+V D P EK RL GN + G F
Sbjct: 277 ESYRRRANRRVSDGTP------TEKRGGAPSGIKRL--HGNLQSLTI----TGAAAREFI 324
Query: 166 HPNQDRIITVRECARSQGFSDSYKFVGDIQHIIGRL 201
HP + R +T+RECAR Q F D Y++VG+ +I ++
Sbjct: 325 HPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQI 360
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,659,065,098
Number of Sequences: 23463169
Number of extensions: 152005858
Number of successful extensions: 268271
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 513
Number of HSP's that attempted gapping in prelim test: 266179
Number of HSP's gapped (non-prelim): 1549
length of query: 216
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 79
effective length of database: 9,144,741,214
effective search space: 722434555906
effective search space used: 722434555906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)