Your job contains 1 sequence.
>046720
MNDIGIDTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRGEIVRKEY
VCSKEGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVH
LLRSHRNVSEVKRSLTHQLAAANIPIHQQISVLELQGGGIQNIGCLGKDLYNDETKSKNK
VKGHDADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDT
TYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIIT
DQDPAITKAISETLPNTFHRYCIWHILNKFSDKIHAIKHKDCYPDFQKCIWKSLSRDDFD
RNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSK
KNSLLDFMIRFNRALNHQRHEELNANHADIMKNLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046720
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 812 6.6e-81 1
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 746 6.5e-74 1
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 652 6.0e-64 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 475 1.8e-57 2
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 467 2.3e-57 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 588 4.5e-57 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 459 2.7e-55 2
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 530 5.1e-51 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 518 4.2e-49 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 502 4.7e-48 1
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 496 3.2e-47 1
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 430 6.1e-40 1
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 379 5.1e-35 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 206 5.7e-16 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 194 1.2e-14 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 177 8.3e-13 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 160 5.8e-11 1
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 166/445 (37%), Positives = 257/445 (57%)
Query: 18 GQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKEYVCSKEG---ATTKEVV 73
G EF + FYN YA+++GFS R++SSR+S R G I+++++VC+KEG K
Sbjct: 76 GLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTK 135
Query: 74 EK--KRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHLLRSHRNVSEV 131
++ KR + R GCKA L+V SG ++VS F +DHNH L P +VH LRSHR +S
Sbjct: 136 DREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGP 195
Query: 132 KRSLTHQLAAANIPIHQQISVLELQGGGIQNIGCLGKDLYNDETKSKNK-VKGHDADMLL 190
++L L AA + + +S L + GGI +G D N ++ K ++G + +LL
Sbjct: 196 AKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEG-EIQLLL 254
Query: 191 EHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNKYGMI 250
++ + N F ++++ + + + FWAD + + FGD V FDTTY +N+Y +
Sbjct: 255 DYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLP 314
Query: 251 FAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAITKAI 310
FAPF GVN+HGQ +F C+F+ +ET SFVWLF + AM P I TD D I AI
Sbjct: 315 FAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDAVIRAAI 374
Query: 311 SETLPNTFHRYCIWHILNKFSDKI-HA-IKHKDCYPDFQKCIWKSLSRDDFDRNWLEIIE 368
P HR+C WHIL K +K+ H +KH DF KC+ + S +DF+R W +++
Sbjct: 375 MHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFERCWFSLLD 434
Query: 369 KGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKNSLLDFM 428
K +LRD+ WL++++ R +WVP + F A MS + R++S +S+F Y++ +L F
Sbjct: 435 KYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFF 494
Query: 429 IRFNRALNHQRHEELNANHADIMKN 453
+ +AL + +E+ A++ D M +
Sbjct: 495 KLYEKALESRLEKEVKADY-DTMNS 518
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 161/447 (36%), Positives = 260/447 (58%)
Query: 3 DIGIDTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRG-EIVRKEYV 61
D+G +G+ E R G +F + + FY EYAK +GF+ I +SR+S + + + ++
Sbjct: 40 DVGF-SGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFA 98
Query: 62 CSKEGAT--TKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRV 119
CS+ G T ++ RR + + CKA + V + G +++ F +DHNH L P
Sbjct: 99 CSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL-PALA 157
Query: 120 HLLRSHRNVSEVKRSLTHQLAAANIPIHQQISVLELQGGGIQNIGCLGK-DLYNDETKSK 178
+ R RNV +++ L A + + + Q GG +NIG L + D+ + K +
Sbjct: 158 YHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGR 217
Query: 179 N-KVKGHDADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVV 237
++ D+ +LLE+F+ K++N F + I+ + + R+ + FWADA SR Y SF DVV
Sbjct: 218 YLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVS 277
Query: 238 FDTTYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKM 297
FDTTY + A FIGVN+H Q + C+ ++DE+ E+FVWL + + +AM G PK+
Sbjct: 278 FDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRAPKV 337
Query: 298 IITDQDPAITKAISETLPNTFHRYCIWHILNKFSDKI-HAIK-HKDCYPDFQKCIWKSLS 355
I+TDQD + A+SE LPNT H + +WH+L K + H +K H++ F KCI++S +
Sbjct: 338 ILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVMKRHENFLLKFNKCIFRSWT 397
Query: 356 RDDFDRNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFK 415
D+FD W +++ + L ++ WL + E R KWVP ++ VF AGMS+SQR+ES +SFF
Sbjct: 398 DDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFD 457
Query: 416 RYVSKKNSLLDFMIRFNRALNHQRHEE 442
+Y+ KK +L +F+ ++ L ++ EE
Sbjct: 458 KYIHKKITLKEFLRQYGVILQNRYEEE 484
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 145/431 (33%), Positives = 228/431 (52%)
Query: 20 EFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRG-EIVRKEYVCSKEGATTKEVVEKKRR 78
EF +D + FY +YAK VGF SSR+S E + ++ C + G+ + R
Sbjct: 2 EFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINPR 61
Query: 79 CSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHLLRSHRNVSEVKRSLTHQ 138
S + GCKA + V + G + V F ++HNH L P + H RSHRN VK + +
Sbjct: 62 ASP-KIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRNTELVKSNDSRL 119
Query: 139 LAAANIPIHQQISVLELQGGGIQNIGCLGKDLYNDETKSKNKVKGH-DADMLLEHFQLEK 197
N P+ L ++ + + N K + V DA++LLE +
Sbjct: 120 RRKKNTPL---TDCKHLSA--YHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQ 174
Query: 198 EKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNKYGMIFAPFIGV 257
E+N F F ++ ++ + + FW DA Y SF DVV F+T+Y +KY + F+GV
Sbjct: 175 EENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGV 234
Query: 258 NNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAITKAISETLPNT 317
N+H Q + C L+D+T ++VWL + + AM G PK+++TDQ+ AI AI+ LP T
Sbjct: 235 NHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPET 294
Query: 318 FHRYCIWHILNKFSDKI-HAIKHKDCY-PDFQKCIWKSLSRDDFDRNWLEIIEKGKLRDN 375
H YC+WH+L++ + + +D + KCI++S S ++FDR WL++I+K LRD
Sbjct: 295 RHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDV 354
Query: 376 AWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKNSLLDFMIRFNRAL 435
W++S++E R W P + + AG+S R+ES +S F RYV + SL +F+ + L
Sbjct: 355 PWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLML 414
Query: 436 NHQRHEELNAN 446
+ EE A+
Sbjct: 415 EDRYEEEAKAD 425
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 475 (172.3 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 93/287 (32%), Positives = 162/287 (56%)
Query: 158 GGIQNIGCLG-KDLYNDETKSKNKVKGHD-ADMLLEHFQLEKEKNSAFTFTIESDNENRI 215
GG+ ++ + DL N + ++ G + +LL++FQ ++ ++ F + IE D+
Sbjct: 296 GGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELDSNGSC 355
Query: 216 THCFWADATSRRGYNSFGDVVVFDTTYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDET 275
FWAD+ SR + FGD VVFDT+Y Y + FA FIG N+H Q + + ++DE+
Sbjct: 356 MSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADES 415
Query: 276 TESFVWLFEQFKKAMPGDLPKMIITDQDPAITKAISETLPNTFHRYCIWHILNKFSDKIH 335
E+F WLF+ + +AM G P+ ++ DQD I +A+++ P T HR+ W I +K + +
Sbjct: 416 KEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLR 475
Query: 336 AIKHKDCYPDFQKCIWKSLSRDDFDRNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNH 395
+ ++ Y +++KC+++S + +FD W ++ K LRDN WL+ ++E R KWVPA +
Sbjct: 476 SFPNEFKY-EYEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRA 534
Query: 396 VFSAGMSSSQRAESCHSFFKRYVSKKNSLLDFMIRFNRALNHQRHEE 442
F G+ + F+ ++ SL +F+ R+ + L +R EE
Sbjct: 535 SFFGGIHVDGTFDP---FYGTSLNSLTSLREFISRYEQGLEQRREEE 578
Score = 144 (55.7 bits), Expect = 1.8e-57, Sum P(2) = 1.8e-57
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 2 NDIGIDTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKEY 60
N I + G+S E +G EF ++ ++YN YA + GF VR +S G + + +
Sbjct: 15 NGIAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRF 74
Query: 61 VCSKEGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
VCSKEG R GC A + V + +G +V+ +++HNH L
Sbjct: 75 VCSKEGFQLNS-----------RTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 130 (50.8 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 14 EARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSH-RGEIVRKEYVCSKEGATTKEV 72
E G EF ++ +FY YA+ VGF VRI +S G I + +VCSKEG
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPS- 247
Query: 73 VEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
R GC A + + + SG ++V +DHNH L
Sbjct: 248 ----------RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 467 (169.5 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 85/256 (33%), Positives = 150/256 (58%)
Query: 185 DADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNT 244
D +LLEHF ++K F + ++ D++ R+ + FW DA ++ Y SF DVV+FDT Y
Sbjct: 169 DLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVR 228
Query: 245 NKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDP 304
N Y + FAPFIGV++H Q + C+ + + + ++ WLF + KA+ G P ++ITDQD
Sbjct: 229 NGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDK 288
Query: 305 AITKAISETLPNTFHRYCIWHILNKFSDKIHA-IKHKDCYPD-FQKCIWKSLSRDDFDRN 362
++ + E P+ H +C+W +L+K S+ ++ + D + + F C+ S + + F+R
Sbjct: 289 LLSDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERR 348
Query: 363 WLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKN 422
W +I K +L +N W++ +F R KWVP + + AG+S +R+ S S F +Y++ +
Sbjct: 349 WSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKYMNSEA 408
Query: 423 SLLDFMIRFNRALNHQ 438
+ DF + + L ++
Sbjct: 409 TFKDFFELYMKFLQYR 424
Score = 154 (59.3 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 14 EARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKEYVCSKEGATTKEV 72
E R G +F + + FY EYA+ VGF + I +SR+S R G+ + + CS+ G ++
Sbjct: 37 ELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKA 96
Query: 73 VE-KKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
R C K GCKA L + + + +V+ F ++HNH +
Sbjct: 97 TAINPRSCPKT--GCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 588 (212.0 bits), Expect = 4.5e-57, P = 4.5e-57
Identities = 142/457 (31%), Positives = 231/457 (50%)
Query: 4 IGIDTGESYE-------EARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRG-EI 55
+G+ TGE E E G EF + + FY EY++ +GF+ I +SR+S E
Sbjct: 52 MGVPTGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREF 111
Query: 56 VRKEYVCSKEGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTT 115
+ ++ CS+ G TK +K + R+ + ++ +G + + D +
Sbjct: 112 IDAKFACSRYG--TKREYDKSFNRPRARQSKQDP----ENMAGRRTCA--KTDCKASMHV 163
Query: 116 PRRVHLLRSHRNVSEVKRSLTHQLAAANIPIHQQISV---LELQGGGIQNIGCLGKDLYN 172
RR + R H+L A Q + + Q + + L D +
Sbjct: 164 KRRPD---GKWVIHSFVREHNHELLPAQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKS 220
Query: 173 DETKSKN-KVKGHDADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNS 231
K + V+ D +LL+ + NS F + ++ ++ R+ + FW DA SR Y S
Sbjct: 221 SFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGS 280
Query: 232 FGDVVVFDTTYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMP 291
F DVV DTTY NKY M A F+GVN H Q V C+ +SDE+ ++ WL E + +A+
Sbjct: 281 FCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIG 340
Query: 292 GDLPKMIITDQDPAITKAISETLPNTFHRYCIWHILNKFSDKIHAI--KHKDCYPDFQKC 349
G PK++IT+ D + + E PNT H +WH+L K S+ + + +H + P F+KC
Sbjct: 341 GQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKFEKC 400
Query: 350 IWKSLSRDDFDRNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAES 409
I+KS +DF R W + + + L+D+ W+ S++E R KW P + V AGMS+SQRA+S
Sbjct: 401 IYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADS 460
Query: 410 CHSFFKRYVSKKNSLLDFMIRFNRALNHQRHEELNAN 446
++FF +Y+ KK S+ +F+ ++ L + EE A+
Sbjct: 461 INAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKAD 497
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 459 (166.6 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 95/289 (32%), Positives = 157/289 (54%)
Query: 158 GGIQNIGCLG-KDLYNDETKS--KNKVKGHDADMLLEHFQLEKEKNSAFTFTIESD-NEN 213
GG+ ++ + D N+ K +N++ +LL++FQ + ++ F + +E D N
Sbjct: 318 GGLDSVDLIELNDFGNNHIKKTRENRIGKEWYPLLLDYFQSRQTEDMGFFYAVELDVNNG 377
Query: 214 RITHCFWADATSRRGYNSFGDVVVFDTTYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSD 273
FWAD+ +R + FGD VVFDT+Y Y + FA IG N+H Q + C+ ++D
Sbjct: 378 SCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSVPFATIIGFNHHRQPVLLGCAMVAD 437
Query: 274 ETTESFVWLFEQFKKAMPGDLPKMIITDQDPAITKAISETLPNTFHRYCIWHILNKFSDK 333
E+ E+F+WLF+ + +AM G P+ I+ DQD I +A+ + P HRY W I K +
Sbjct: 438 ESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVFPGAHHRYSAWQIREKEREN 497
Query: 334 IHAIKHKDCYPDFQKCIWKSLSRDDFDRNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACV 393
+ + Y +++KCI+++ + +FD W +I K LRD+ WL+ ++E R WVPA +
Sbjct: 498 LIPFPSEFKY-EYEKCIYQTQTIVEFDSVWSALINKYGLRDDVWLREIYEQRENWVPAYL 556
Query: 394 NHVFSAGMSSSQRAESCHSFFKRYVSKKNSLLDFMIRFNRALNHQRHEE 442
F AG+ + E FF + L +F+ R+ +AL +R EE
Sbjct: 557 RASFFAGIPINGTIEP---FFGASLDALTPLREFISRYEQALEQRREEE 602
Score = 142 (55.0 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 2 NDIGIDT-GESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKE 59
N I D G S E +G EF ++ EFYN YA + GF VR +S G + +
Sbjct: 29 NGISEDEEGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRR 88
Query: 60 YVCSKEGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
+VCSKEG R GC A + V + +G +V+ +++HNH L
Sbjct: 89 FVCSKEGFQLNS-----------RTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 127 (49.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 34/101 (33%), Positives = 48/101 (47%)
Query: 14 EARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSH-RGEIVRKEYVCSKEGATTKEV 72
E G EF ++ +FY YA+ VGF VRI +S G I + +VCS+EG
Sbjct: 210 EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHPS- 268
Query: 73 VEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
R GC A + + + SG ++V +DHNH L
Sbjct: 269 ----------RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 126/442 (28%), Positives = 229/442 (51%)
Query: 6 IDTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRI-NSSRKSHRGEIVRKEYVCSK 64
+D + ++ +G EF DD + +YN YA +VGF VR+ NS K E CS
Sbjct: 76 VDERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSS 135
Query: 65 EGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHLLRS 124
+G K + + R + R GC A + + + S + V DHNH L +
Sbjct: 136 QGF--KRINDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLLGC-------KL 186
Query: 125 HRNVSEVKRSLTHQLA-AANIPIHQQISVLELQGGGIQNIGCLGKDLYNDETKSKN--KV 181
+++V ++ ++ ++ A I +++ V++ G + L K N T S + +
Sbjct: 187 YKSVKRKRKCVSSPVSDAKTIKLYRAC-VVD-NGSNVNPNSTLNKKFQNS-TGSPDLLNL 243
Query: 182 KGHDADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTT 241
K D+ + +F + N F + ++ ++E ++ + FWADA S+ + FGDV+ D++
Sbjct: 244 KRGDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSS 303
Query: 242 YNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITD 301
Y + K+ + F GVN+HG+TT+ +C FL+ ET ES+ WL + + M P+ I+TD
Sbjct: 304 YISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRS-PQTIVTD 362
Query: 302 QDPAITKAISETLPNTFHRYCIWHILNKFSDKIHAIKHKDCYPD-FQKCIWKSLSRDDFD 360
+ + AIS+ P + R+ + HI+ K +K+ + + D F K ++++L +F+
Sbjct: 363 RCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKVVEFE 422
Query: 361 RNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSK 420
W ++ + +N WL+S++E R+KW P + F AG++++ E+ FF+RYV K
Sbjct: 423 AAWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHK 482
Query: 421 KNSLLDFMIRFNRALNHQRHEE 442
+ L +F+ ++ AL + EE
Sbjct: 483 QTPLKEFLDKYELALQKKHREE 504
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 518 (187.4 bits), Expect = 4.2e-49, P = 4.2e-49
Identities = 131/425 (30%), Positives = 211/425 (49%)
Query: 38 VGFSVRINSSRKSHRGEIVRKEYVCSK-----EGATT-KEVV---EKKRRCSKVREGCKA 88
VG KS E R+ SK +G+ + +E V KR ++ E C A
Sbjct: 51 VGMEFNSEKEAKSFYDEYSRQLGFTSKLLPRTDGSVSVREFVCSSSSKRSKRRLSESCDA 110
Query: 89 KLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHLLRSHRNVSEVKRSLTHQLAAANIPIHQ 148
+ + +VV+ F ++H H L + +H LR R+ + ++S ++Q N+P
Sbjct: 111 MVRIELQGHEKWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEKS-SYQ-EGVNVPSGM 168
Query: 149 QISVLELQGGGIQNIGCLGKDLYNDETKSKNKVKGHDADMLLEHFQLEKEKNSAFTFTIE 208
++ G +N T +K + G DA LLE+F+ + +N F + ++
Sbjct: 169 MYVSMDANSRGARNASMA--------TNTKRTI-GRDAHNLLEYFKRMQAENPGFFYAVQ 219
Query: 209 SDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNKYGMIFAPFIGVNNHGQTTVFAC 268
D +N++++ FWAD+ SR Y FGD V DT Y N++ + FAPF GVN+HGQ +F C
Sbjct: 220 LDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQAILFGC 279
Query: 269 SFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAITKAISETLPNTFHRYCI--WHI 326
+ + DE+ SF+WLF+ F AM P ++TDQD AI A + P R+CI W +
Sbjct: 280 ALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFPGA--RHCINKWDV 337
Query: 327 LNKFSDKI-HAIKHKDCYPDFQ----KCIWKSLSRDDFDRNWLEIIEKGKLRDNAWLKSV 381
L + +K+ H YP FQ CI + + ++F+ +W +I+K L + WL S+
Sbjct: 338 LREGQEKLAHVCL---AYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNSL 394
Query: 382 FEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKNSLLDFMIRFNRALNHQRHE 441
+ R++WVP F A + SQ SFF YV+++ +L F + RA+
Sbjct: 395 YNARAQWVPVYFRDSFFAAVFPSQGYSG--SFFDGYVNQQTTLPMFFRLYERAMESWFEM 452
Query: 442 ELNAN 446
E+ A+
Sbjct: 453 EIEAD 457
Score = 147 (56.8 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 52/231 (22%), Positives = 106/231 (45%)
Query: 2 NDIGIDTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRGEIVRKEYV 61
N +G+ E +G EF + FY+EY++++GF+ ++ R G + +E+V
Sbjct: 36 NSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL-LPRTD--GSVSVREFV 92
Query: 62 CSKEGATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHL 121
CS +++K KRR S E C A + + +VV+ F ++H H L + +H
Sbjct: 93 CS---SSSKR---SKRRLS---ESCDAMVRIELQGHEKWVVTKFVKEHTHGLASSNMLHC 143
Query: 122 LRSHRNVSEVKRSLTHQLAAANIPIHQQISVLELQGGGIQNIGC-------LGKDLYNDE 174
LR R+ + ++S ++Q N+P ++ G +N +G+D +N
Sbjct: 144 LRPRRHFANSEKS-SYQ-EGVNVPSGMMYVSMDANSRGARNASMATNTKRTIGRDAHNLL 201
Query: 175 TKSKNKVKGHDADMLLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATS 225
K +++ + QL+++ + F +D+ +R+ + + D +
Sbjct: 202 EYFK-RMQAENPGFFYA-VQLDEDNQMSNVFW--ADSRSRVAYTHFGDTVT 248
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 129/426 (30%), Positives = 223/426 (52%)
Query: 17 LGQEFVLLDDVHEFYNEYAKKVGFSVRINSSR-KSHRGE-IVRKEYVCSKEGATT-KEVV 73
LGQ F+ D +EFY+ +AK+ GFS+R + + K G+ + R+ +VC + G T K +
Sbjct: 50 LGQIFLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLS 109
Query: 74 EKK--RRCSKVREGCKAKLAVVK-SKSGT--YVVSVFEEDHNHPLTTPRRVHLLRSHRNV 128
E K R R GC+A L + K ++ G+ + V+ F HNH L P +V L ++R++
Sbjct: 110 EGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSI 169
Query: 129 SEVKRSLTHQLAAANIPIHQQISVLELQGGGIQN-IGCLGKDLYNDETKSKNKVKGHDAD 187
S+ +S + I + Q + +LEL+ + KD+ N +S K+ D +
Sbjct: 170 SDADKSRILMFSKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRN-LLQSFKKLDPEDEN 228
Query: 188 M-LLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNK 246
+ L Q KEK+ F F D +++ + W+ A+S + Y FGD VVFDTT+ +
Sbjct: 229 IDFLRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSA 288
Query: 247 YGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAI 306
M ++GVNN+G F C L DE S+ W + F M G P+ I+TD + +
Sbjct: 289 VEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCL 348
Query: 307 TKAISETLPNTFHRYCIWHILNKFSDKIHA---IKHKDCYPDFQKCIWKSLSRDDFDRNW 363
+AI+ +P T H CIW ++ KF +A ++ D +F + ++ S ++F+ W
Sbjct: 349 KEAIAGEMPATKHALCIWMVVGKFPSWFNAGLGERYNDWKAEFYR-LYHLESVEEFELGW 407
Query: 364 LEIIEKGKLRDNAWLKSVFEIRSKW-VPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKN 422
+++ L N + +++ RS W +P +H F AGM+ + R+++ ++F +R++S +
Sbjct: 408 RDMVNSFGLHTNRHINNLYASRSLWSLPYLRSH-FLAGMTLTGRSKAINAFIQRFLSAQT 466
Query: 423 SLLDFM 428
L F+
Sbjct: 467 RLAHFV 472
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 496 (179.7 bits), Expect = 3.2e-47, P = 3.2e-47
Identities = 118/438 (26%), Positives = 210/438 (47%)
Query: 18 GQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRGEIVRKEYVCSK-EGATTKEVVEKK 76
G EF DD + FYN YA+++GF++R+ SS + R +C +G + +
Sbjct: 98 GMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFKLLKDAHSR 157
Query: 77 RRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVHLLRSHRNVSEVKRSLT 136
R+ + R GC+A + + + V + DHNH P+R H +SH+ S T
Sbjct: 158 RK--ETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFD-PQRAHNSKSHKKSSSSASPAT 214
Query: 137 HQLAAANIPIHQQISVLELQGG-GIQNIGCLGKDLYNDET--------KSKNKVKGHDAD 187
P H Q+ ++L + LG L + ET +S +++
Sbjct: 215 K--TNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLELRGGF 272
Query: 188 MLLEHFQLEKEKNSA-FTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNK 246
L+ F + + +S F + ++ ++ + + FW DA +R Y+ FGDV++FDTT +N
Sbjct: 273 RALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNA 332
Query: 247 YGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAI 306
Y + F+G+N+HG T + C L+D++ E++VWLF + M G P++ IT+Q A+
Sbjct: 333 YELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQCKAM 392
Query: 307 TKAISETLPNTFHRYCIWHILNKFSDKIHAIKHKDCYP-DFQKCIWKSLSRDDFDRNWLE 365
A+SE P HR + H+L+ + ++ D +P + ++ L ++F+ W E
Sbjct: 393 RTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMALNRVVYGCLKVEEFETAWEE 452
Query: 366 IIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSF-FKRYVSKKNSL 424
+I + + +N ++ +F+ R W P + F AG + F F YV + SL
Sbjct: 453 MIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIFSGYVHENTSL 512
Query: 425 LDFMIRFNRALNHQRHEE 442
+F+ + L+ + E
Sbjct: 513 REFLEGYESFLDKKYTRE 530
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 430 (156.4 bits), Expect = 6.1e-40, P = 6.1e-40
Identities = 110/366 (30%), Positives = 179/366 (48%)
Query: 70 KEVVEKKRRCSKVREGCKAKLAVVKSK-SGT--YVVSVFEEDHNHPLTTPRRVHLLRSHR 126
K VE R VR GC KL + K G + VS F HNH L +V LL ++R
Sbjct: 113 KANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYR 172
Query: 127 NVSEVKRSLTHQLAAANIPIHQQISVLELQGGGIQN-IGCLGKDLYNDETKSKNKVKGHD 185
+ + + L+ A P+++ + +LEL+ G + + + KD+ N K V+ +D
Sbjct: 173 KIQQSDQERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQEND 232
Query: 186 ADM----------LLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDV 235
A M LLE + E++ F + SD ++ + WA S RGY+ FGDV
Sbjct: 233 AFMTEKRESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDV 292
Query: 236 VVFDTTYNTNKYGMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLP 295
VVFDT+Y + YG++ F G++N+G+ + C L DE+ SF W + F + M G P
Sbjct: 293 VVFDTSYRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHP 352
Query: 296 KMIITDQDPAITKAISETLPNTFHRYCIWHILNKFSDKIHAIKHKDCYPDFQK---CIWK 352
+ I+TD D + AI +PNT H + HI++K + Y +F+ + +
Sbjct: 353 QTILTDIDTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSH-YEEFRAGFDMLCR 411
Query: 353 SLSRDDFDRNWLEIIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHS 412
+ + D+F++ W ++ + L + ++ R+ W+P C+ F A +S+ S S
Sbjct: 412 AGNVDEFEQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDS 471
Query: 413 FFKRYV 418
F KR V
Sbjct: 472 FLKRVV 477
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 56/179 (31%), Positives = 90/179 (50%)
Query: 17 LGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHRGEIVRKEYVCSKEGATT---KEVV 73
+GQ F D+ E+Y+ +A+K GFS+R S +S + R+++VC + G K V
Sbjct: 57 VGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANV 116
Query: 74 EKKRRCSKVREGCKAKLAVVKSK-SGT--YVVSVFEEDHNHPLTTPRRVHLLRSHRNVSE 130
E R VR GC KL + K G + VS F HNH L +V LL ++R + +
Sbjct: 117 EHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQ 176
Query: 131 VKRSLTHQLAAANIPIHQQISVLELQGGGIQN-IGCLGKDLYNDETKSKNKVKGHDADM 188
+ L+ A P+++ + +LEL+ G + + + KD+ N K V+ +DA M
Sbjct: 177 SDQERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFM 235
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 79/262 (30%), Positives = 138/262 (52%)
Query: 189 LLEHFQLEKEKNSAFTFTIESDNENRITHCFWADATSRRGYNSFGDVVVFDTTYNTNK-Y 247
+L + + + +N F + IE D N FWAD T R Y FGD +VFDTTY K Y
Sbjct: 21 VLNYLKRRQLENPGFLYAIEDDCGN----VFWADPTCRLNYTYFGDTLVFDTTYRRGKRY 76
Query: 248 GMIFAPFIGVNNHGQTTVFACSFLSDETTESFVWLFEQFKKAMPGDLPKMIITDQDPAIT 307
+ FA F G N+HGQ +F C+ + +E+ SF WLF+ + +AM P I + D I
Sbjct: 77 QVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDRLIQ 136
Query: 308 KAISETLPNTFHRYCIWHILNKFSDKI-HAIK-HKDCYPDFQKCIWKSLSRDDFDRNWLE 365
A+S T R+ I + +K+ H + H +F C+ ++ + +F+ +W
Sbjct: 137 VAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFEASWDS 196
Query: 366 IIEKGKLRDNAWLKSVFEIRSKWVPACVNHVFSAGMSSSQRAESCHSFFKRYVSKKNSLL 425
I+ + + DN WL+S++ R +WV + F +S+++ + +SFF+ +V ++
Sbjct: 197 IVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDASTTMQ 256
Query: 426 DFMIRFNRALNHQRHEELNANH 447
+ ++ +A++ R +EL A++
Sbjct: 257 MLIKQYEKAIDSWREKELKADY 278
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 206 (77.6 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 50/134 (37%), Positives = 74/134 (55%)
Query: 13 EEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINS-SRKSHRGEIVRKEYVCSKEGATTKE 71
+E +GQEF H FYN YA KVGF +R++ SR H G + ++ VC+KEG
Sbjct: 68 DEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPS 127
Query: 72 VVEKK-RRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLTTPRRVH---LLRSHRN 127
+K R+ ++ R GCKA + + K SG +V++ F ++HNH L P RV + + N
Sbjct: 128 KRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRVRRGCIYDQYPN 186
Query: 128 VSEVKRSLTHQLAA 141
+ + L QLAA
Sbjct: 187 EHDKIQELMQQLAA 200
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 194 (73.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/110 (38%), Positives = 65/110 (59%)
Query: 7 DTGESYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKEYVCSKE 65
D E +G EF + FY+ YA +GF +R+++ R+S R G +V + VC+KE
Sbjct: 25 DEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKE 84
Query: 66 G--ATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
G + E ++ + REGCKA + V + KSGT++V+ FE++HNHPL
Sbjct: 85 GFRRSRPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPL 134
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 177 (67.4 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 49/139 (35%), Positives = 77/139 (55%)
Query: 14 EARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSHR-GEIVRKEYVCSKEGATT--- 69
E R G F D FY++Y++++GF +R+ S R+S + G I+ + + C+KEG
Sbjct: 21 EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80
Query: 70 -KEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPLT-TPRRV-HLL-RSH 125
K +K R S REGCKA + V +SG +V++ F ++HNHPL +PR H L
Sbjct: 81 GKFGSVRKPRPS-TREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKD 139
Query: 126 RNVSEVKRSLTHQ--LAAA 142
+ + E+ L ++ L AA
Sbjct: 140 KRIQELTIELRNKKRLCAA 158
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 160 (61.4 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 8 TGE-SYEEARLGQEFVLLDDVHEFYNEYAKKVGFSVRINSSRKSH-RGEIVRKEYVCSKE 65
TG+ +E +G +F ++ +FY EY+K++GF VR+ R+S G + + C+K+
Sbjct: 2 TGDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQ 61
Query: 66 GATTKEVVEKKRRCSKVREGCKAKLAVVKSKSGTYVVSVFEEDHNHPL 113
G S REGCKA + V KSG +VV+ F ++HNH L
Sbjct: 62 GFGPNNQ-RSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 455 0.00094 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 617 (66 KB)
Total size of DFA: 311 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.38u 0.08s 39.46t Elapsed: 00:00:01
Total cpu time: 39.38u 0.08s 39.46t Elapsed: 00:00:01
Start: Mon May 20 21:30:32 2013 End: Mon May 20 21:30:33 2013