Your job contains 1 sequence.
>046721
MEQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQR
RLHIPTIDRSYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKR
RLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL
DKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS
LSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYS
LAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEY
QDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQ
TREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQCTNLIQLVYGKSTPTS
ATLSKEVQDSSDSEESDDDEFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKG
EEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNS
GSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQMNI
AELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ
VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVV
AIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVA
QCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGW
ADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNP
LVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVVMEPQERKVHALIQHLKLIRNEKMKK
RKLKEARKRNEVEAERAKDKQLTRKRQRGERQERYREQDKLKKKIRVH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046721
(1068 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 1691 4.7e-302 2
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 1035 5.3e-209 3
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 1034 4.2e-207 3
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 1041 1.3e-204 2
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 975 2.3e-196 2
UNIPROTKB|E9PTV4 - symbol:Bms1 "Protein Bms1" species:101... 961 2.7e-191 2
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 981 1.5e-190 2
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 904 7.6e-189 3
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 883 9.2e-178 2
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 1681 5.4e-173 1
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 834 5.1e-164 2
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 838 2.3e-158 2
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 838 2.3e-158 2
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 770 7.9e-149 2
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 1039 5.8e-105 1
UNIPROTKB|I3LND5 - symbol:BMS1 "Uncharacterized protein" ... 958 1.3e-103 3
GENEDB_PFALCIPARUM|PFA0330w - symbol:AARP2 "pfAARP2 prote... 423 1.3e-91 5
UNIPROTKB|Q8I275 - symbol:AARP2 "PfAARP2 protein" species... 423 1.3e-91 5
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 851 4.9e-85 1
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 835 2.4e-83 1
UNIPROTKB|Q2NL82 - symbol:TSR1 "Pre-rRNA-processing prote... 226 1.4e-21 2
UNIPROTKB|J9NS98 - symbol:TSR1 "Uncharacterized protein" ... 229 3.6e-21 2
UNIPROTKB|Q5R434 - symbol:TSR1 "Pre-rRNA-processing prote... 221 1.7e-20 2
UNIPROTKB|Q5XGY1 - symbol:tsr1 "Pre-rRNA-processing prote... 178 8.4e-20 2
UNIPROTKB|E2QYA6 - symbol:E2QYA6 "Uncharacterized protein... 227 1.0e-19 3
UNIPROTKB|F1MSR6 - symbol:TSR1 "Uncharacterized protein" ... 211 1.6e-19 2
RGD|2322150 - symbol:Tsr1 "TSR1, 20S rRNA accumulation, h... 198 5.9e-19 2
ZFIN|ZDB-GENE-030131-3762 - symbol:tsr1 "TSR1, 20S rRNA a... 184 7.3e-19 3
MGI|MGI:2144566 - symbol:Tsr1 "TSR1 20S rRNA accumulation... 201 1.9e-18 2
UNIPROTKB|F1PXP0 - symbol:F1PXP0 "Uncharacterized protein... 189 5.6e-17 2
UNIPROTKB|C9JUY9 - symbol:AGAP10 "Arf-GAP with GTPase, AN... 236 2.8e-16 2
UNIPROTKB|Q5VTM2 - symbol:AGAP9 "Arf-GAP with GTPase, ANK... 236 2.8e-16 2
UNIPROTKB|F1NNP8 - symbol:LOC100857289 "Uncharacterized p... 175 2.8e-16 2
TAIR|locus:2035893 - symbol:AT1G42440 "AT1G42440" species... 154 1.2e-15 4
WB|WBGene00006497 - symbol:tag-151 species:6239 "Caenorha... 119 3.4e-11 3
UNIPROTKB|Q19329 - symbol:tag-151 "Pre-rRNA-processing pr... 119 3.4e-11 3
FB|FBgn0037073 - symbol:CG7338 species:7227 "Drosophila m... 156 3.3e-10 3
DICTYBASE|DDB_G0278331 - symbol:DDB_G0278331 "Pre-rRNA-pr... 138 5.3e-10 3
UNIPROTKB|Q61WR2 - symbol:tag-151 "Pre-rRNA-processing pr... 114 4.8e-08 3
POMBASE|SPAC23H4.15 - symbol:SPAC23H4.15 "ribosome biogen... 148 8.0e-08 3
GENEDB_PFALCIPARUM|PF14_0494 - symbol:PF14_0494 "hypothet... 124 2.7e-07 5
UNIPROTKB|Q8IKV7 - symbol:PF14_0494 "Ribosome biogenesis ... 124 2.7e-07 5
ASPGD|ASPL0000007982 - symbol:AN6266 species:162425 "Emer... 100 2.3e-05 3
SGD|S000002218 - symbol:TSR1 "Protein required for proces... 95 7.0e-05 2
CGD|CAL0002141 - symbol:TSR1 species:5476 "Candida albica... 102 8.1e-05 3
UNIPROTKB|Q5A346 - symbol:tsr1 "Putative uncharacterized ... 102 8.1e-05 3
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 1691 (600.3 bits), Expect = 4.7e-302, Sum P(2) = 4.7e-302
Identities = 356/611 (58%), Positives = 417/611 (68%)
Query: 467 NLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLREVLDGRLFNMDEC 526
NL+Q+VYG S+ + L E FF+PK E +K L LD N ++C
Sbjct: 558 NLMQIVYGASS-LATPLINENHDISDDDESDDEDFFKPKGEQHKNLGGGLDVGYVNSEDC 616
Query: 527 SKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDL 586
SKF +YG LK+ K +EV ESIRDRF TGDWSKAA R++ + G G+ DD + GDFEDL
Sbjct: 617 SKFVNYGYLKNWKEKEVCESIRDRFTTGDWSKAALRDK-NLGTG-GEGEDDELYGDFEDL 674
Query: 587 ETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVD 646
ET EKH+ H SG+N ENE E A E+ E+DG Q +E G D
Sbjct: 675 ETGEKHKSHENLESGAN--ENEDEDA------------EVVERDGNNPR-SQADEPGYAD 719
Query: 647 KMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLV 706
K+KE E KQ N E NDLDE TR+EL GFRTGTYLRL IH+VP+EMVE+FDPCHP+LV
Sbjct: 720 KLKEAQEITKQRNELEYNDLDEETRIELAGFRTGTYLRLEIHNVPYEMVEFFDPCHPILV 779
Query: 707 GGIGLGEENVGYMQ-----------VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRML 755
GGIG GE+NVGYMQ VLKTRDPII+SIGWRR+QTIPV+AIEDRNG HRML
Sbjct: 780 GGIGFGEDNVGYMQARLKKHRWHKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNGRHRML 839
Query: 756 KYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKL 815
KYTPEHMHCLA FWGPL PP TG VA QN SNNQA FRITAT+VVLEFNH+ +I KKIKL
Sbjct: 840 KYTPEHMHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIVKKIKL 899
Query: 816 VGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQ 875
VG PCKI KKTA IKDMFTSDLE+A+ EG VRTVSGIRGQVKKA K + N+ +
Sbjct: 900 VGTPCKIKKKTAFIKDMFTSDLEIARFEGSSVRTVSGIRGQVKKAGKNMLDNKAE----- 954
Query: 876 PREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRRE 935
EGIARCTFED+I MSD+VF+R W VE+P+FYNPLTTA+QPRDK W GMKT ELRRE
Sbjct: 955 --EGIARCTFEDQIHMSDMVFLRAWTTVEVPQFYNPLTTALQPRDKTWNGMKTFGELRRE 1012
Query: 936 HNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVV 995
N+ IPVNKDSLYKAI R+ +KFNPL IPK L+ LPF SKPK+IP RKR LE+ RAV+
Sbjct: 1013 LNIPIPVNKDSLYKAIERKQKKFNPLQIPKRLEKDLPFMSKPKNIPKRKRPSLEDKRAVI 1072
Query: 996 MEPQERKVHALIQHLKLIXXXXXXXXXXXXXXXXXXVEAERAKDKQLTXXXXXXXXXXXX 1055
MEP+ERK H +IQ +L+ EAE+AK++++
Sbjct: 1073 MEPKERKEHTIIQQFQLLQHHTMKKKKATDQKKRKEYEAEKAKNEEINKKRRREERRDRY 1132
Query: 1056 XXXDKLKKKIR 1066
DK KKK R
Sbjct: 1133 REEDKQKKKTR 1143
Score = 1232 (438.7 bits), Expect = 4.7e-302, Sum P(2) = 4.7e-302
Identities = 251/482 (52%), Positives = 320/482 (66%)
Query: 2 EQQP-HKAHRARQSGSSAKKISKSEINKQDK-----KKPNPKAFGFASSVKAKRSMMRTA 55
E P H++HR +SG +A+K KSE++K+ + K+ N KAFG S V AK++ A
Sbjct: 5 ELMPSHRSHRTPKSGPTARK--KSELDKKKRGISVDKQKNLKAFGVKSVVHAKKAKHHAA 62
Query: 56 EKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVV 115
EKEQ+RLH+P IDR+YGE KSL+IK L+K +TK VPEVRGP+T+V
Sbjct: 63 EKEQKRLHLPKIDRNYGEAPPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVRGPITIV 122
Query: 116 SGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
GK+RR QFVECPNDIN M+DCAK ADLALL++D S+GFEMETFEFLN+MQ HG P VMG
Sbjct: 123 QGKQRRFQFVECPNDINAMVDCAKVADLALLVVDGSYGFEMETFEFLNIMQVHGFPRVMG 182
Query: 176 VLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISV 235
VLTHL F TE+YHGAKLF LSGLI GKYT +++ NLA F+ V
Sbjct: 183 VLTHLDKFNDVKKLRKTKHHLKHRFWTEIYHGAKLFYLSGLIHGKYTPREVHNLARFVIV 242
Query: 236 MKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAG 295
+K L+WRT+HPY+LVDR EDVTPPE+V ++ KCDRN+ ++GYLRGCN KK KVHIAG
Sbjct: 243 IKPQPLTWRTAHPYVLVDRLEDVTPPEKVQMDKKCDRNITVFGYLRGCNFKKRMKVHIAG 302
Query: 296 AGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFV 355
GD+ +AGVT L DPCPLPSA KKKGLRD++KLFYAPMSG+GDL+YDKDAVYI+IN H V
Sbjct: 303 VGDFIVAGVTALTDPCPLPSAGKKKGLRDRDKLFYAPMSGIGDLVYDKDAVYININSHQV 362
Query: 356 QFSEY-------------QDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATN 402
Q+S+ +DVG LVKSLQNTKY +D+KL+K+ I+ F +K + S+
Sbjct: 363 QYSKTDDGKGEPTNKGKGRDVGEDLVKSLQNTKYSVDEKLDKTFINFFGKKTSASSETKL 422
Query: 403 NAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSF 462
A+D G +++ G E V E E + ++ ++ G FK
Sbjct: 423 KAEDAYHSLP--EGSDSESQSGDDE---EDIVGNESE-MKQETEIHGGRLRRKAIFKTDL 476
Query: 463 GQ 464
+
Sbjct: 477 NE 478
Score = 55 (24.4 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNS--GSNAIENEYESAVERRLKKISLRK-E 625
+ GDD +D V + E + E H G ++ + ++ E+++E A + L +
Sbjct: 439 SQSGDDEEDIVGNESEMKQETEIHGGRLRRKAIFKTDLNEDDFEEADDLELDSYDPDTYD 498
Query: 626 IDEKDGAK 633
+E D A+
Sbjct: 499 FEEADDAE 506
Score = 45 (20.9 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 574 DSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIEN 607
DS D + DFE+ + E ++D +A ++
Sbjct: 490 DSYDPDTYDFEEADDAESDDNEVEDGGDDSASDS 523
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 1035 (369.4 bits), Expect = 5.3e-209, Sum P(3) = 5.3e-209
Identities = 253/657 (38%), Positives = 370/657 (56%)
Query: 390 FSQKPNVLSDATNNAKDMDDDTEYIHGKQYQ--TREGTSNGLGEKHVAEEMES----LHE 443
F+ + +++ + ++ D + E GK++ ++ +S LG ++ +E L E
Sbjct: 596 FASEDEPEGNSSLSTEEEDSENEEAIGKKFPKPSQVVSSQKLGSGNLIDETSDIEDLLKE 655
Query: 444 DADVKKGEKFS-----ALAFKKSFGQCTNLIQLVYGKSTPTS-----ATLSKEVQXXXXX 493
+ D K+ +S AL +K+ + L ++TP T++++ +
Sbjct: 656 EEDYKEENNYSTETSGALKWKEDLSRKAAEAFLRQQQTTPNLRKLIYGTVTEDNEEEDGD 715
Query: 494 XXXXXXXFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVT 553
FR ++ + D ++D CS+F+ EEV SIRD FVT
Sbjct: 716 NGEELGGLFRVSQPASE-CKHKAD----SLD-CSRFHVEAPHDWDL-EEVMNSIRDCFVT 768
Query: 554 GDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAV 613
G W + +K +E D+ + GDFEDLET + H+G ++ +E E + +
Sbjct: 769 GKWE---EDKDAAKILAE----DEELYGDFEDLETGDVHKGKPGPDTQIEDVEEEVKEEI 821
Query: 614 ERRLKKISLRKEIDEKDGAK--FHCG-QPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVT 670
+ ++ + +K +D+K K F E D +K E++ + Q+N AE D ++
Sbjct: 822 DPSAEESAKKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMQKQAQLNRAEFEDQEDEA 881
Query: 671 RLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ---------- 720
R++ EGFR G Y+R+ I +VP E V FDP +P+++GG+G E NVGY+Q
Sbjct: 882 RVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYK 941
Query: 721 -VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGV 779
+LK+RDPII S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FWGP+ P TG
Sbjct: 942 KILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGF 1001
Query: 780 VAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEV 839
+A+Q+ S + FRI AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEV
Sbjct: 1002 LAVQSVSGSMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEV 1061
Query: 840 AQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRG 899
A+ EG +RTVSGIRGQ+KKA + P EG R TFED++LMSD+VFMR
Sbjct: 1062 AKFEGAVIRTVSGIRGQIKKALRA------------P-EGAFRATFEDKLLMSDIVFMRT 1108
Query: 900 WADVEIPRFYNPLTTAMQP-RDK-IWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRK 957
W V IP FYNP+T+ ++P +K W GM+T +LR H + + NKDSLYK I R+ +
Sbjct: 1109 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGIKLKANKDSLYKPIVRQKKH 1168
Query: 958 FNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
FN L IPK+LQ ALPF+SKPK + + R AV+ EP ERK+ AL+ L +
Sbjct: 1169 FNSLHIPKALQKALPFKSKPKTQAKAGKTPKDRVRPAVIREPHERKILALLDALSTV 1225
Score = 978 (349.3 bits), Expect = 5.3e-209, Sum P(3) = 5.3e-209
Identities = 211/465 (45%), Positives = 284/465 (61%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME + K HR + SG A+K K + +++D +K NPKAF S+V+ RS R
Sbjct: 1 METKDQKKHRKKNSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRK 60
Query: 55 AEKEQ----RRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRG 110
+ Q ++ HIP +DR+ E KS LI+CLI+++T+ K+ E+RG
Sbjct: 61 TNRTQDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRG 120
Query: 111 PVTVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGL 170
PVT+VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG
Sbjct: 121 PVTIVSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGF 180
Query: 171 PNVMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLA 230
P +MGVLTHL F TE+Y GAKLF LSG++ G+Y ++I NL
Sbjct: 181 PKIMGVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLG 240
Query: 231 EFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTK 290
FI+VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG +LK ++
Sbjct: 241 RFITVMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNTKCDRKVSLYGYLRGAHLKNKSQ 300
Query: 291 VHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDI 350
VHI G GD++++ V+ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 VHIPGVGDFAVSDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDL 360
Query: 351 NDHFVQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNAKDM 407
F E ++V T LV+SL +T ID K+ S ++LFS KP D N + M
Sbjct: 361 GGSH-GFQESEEVRPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGQWM 419
Query: 408 DDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
+ + + K + R G++ E ES ED ++ G++
Sbjct: 420 PKEEKQVDLKTGRVRRKAI--FGDEEEDESGESDDEDDEMSDGDR 462
Score = 50 (22.7 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 530 NSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQV-SKGNSEGD-----DSDDAVSGDF 583
NSY D ++ +G++ E ++++G K +R ++ ++ + E D DSDD +
Sbjct: 465 NSYSDDETEEGQDA-EVTDKQYMSG---KGIKRQKLETEEDFEVDLPAFADSDDDLERSS 520
Query: 584 EDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKD 630
+ E E + +++S + + ES R K L + D D
Sbjct: 521 VEEEAEEADESSEEEDSTAEEERDILESEAVREGGKPELLQTDDSSD 567
Score = 50 (22.7 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 29/125 (23%), Positives = 51/125 (40%)
Query: 558 KAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRL 617
KA ++ + E DD DD +S D + LE ++ + + +Y S + +
Sbjct: 436 KAIFGDEEEDESGESDDEDDEMS-DGDRLEN-SYSDDETEEGQDAEVTDKQYMSG--KGI 491
Query: 618 KKISLRKEID-EKDGAKFHCGQPN-EIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELE 675
K+ L E D E D F + E V++ EE + + + + ++ LE E
Sbjct: 492 KRQKLETEEDFEVDLPAFADSDDDLERSSVEEEAEEADESSEEEDSTAEEERDI--LESE 549
Query: 676 GFRTG 680
R G
Sbjct: 550 AVREG 554
Score = 47 (21.6 bits), Expect = 5.3e-209, Sum P(3) = 5.3e-209
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 406 DMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
D DDD E ++ + E + E AEE + E V++G K
Sbjct: 511 DSDDDLERSSVEE-EAEEADESSEEEDSTAEEERDILESEAVREGGK 556
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 1034 (369.0 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 229/511 (44%), Positives = 312/511 (61%)
Query: 525 ECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFE 584
+CSKF + EEV SIRD FVTG W + K ++ + D+ + GDFE
Sbjct: 751 DCSKF-LVEKPQDWDLEEVMSSIRDCFVTGKWEE-------DKDAAKLLEEDEELYGDFE 802
Query: 585 DLETVEKHQGH--IKDNSGSNAIENEYES----AVERRLKKISL--RKEIDEKDGAKFHC 636
DLET H+G + + N EN+ A E KK L ++++ E A++
Sbjct: 803 DLETGVVHKGRPATEGDESENEEENDGNKSKPEAEEEEAKKERLDKKRKLKEMFDAEYDE 862
Query: 637 GQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVE 696
G D +KEE+ + Q+N E D D+ TR++ EGFR G Y+R+ I +VP E V
Sbjct: 863 GDATYF---DDLKEEMHKQAQLNKTEFEDQDDETRVQYEGFRPGMYVRIEIENVPCEFVL 919
Query: 697 YFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIILSIGWRRFQTIPVYAI 745
FDP +P+++GG+G E NVGY+Q +LKTRDP+ILS GWRRFQTIPV+ I
Sbjct: 920 NFDPHYPIILGGLGNSEGNVGYVQLRLKKHRWYKKILKTRDPLILSFGWRRFQTIPVFYI 979
Query: 746 EDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNH 805
ED NG HR+LKYTP+HMHC A FWGP+ P TG +A+Q+ S FRI AT VVL+ +
Sbjct: 980 EDHNGRHRLLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFRIAATGVVLDLDK 1039
Query: 806 EVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEI 865
+ + KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1040 SITVVKKLKLTGFPFKIFKNTSFIKGMFNSQLEVAKFEGAAIRTVSGIRGQIKKALRA-- 1097
Query: 866 GNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDK--IW 923
P G R TFED++LMSD+VF+R W V IP+FYNP+T+ ++P + W
Sbjct: 1098 ----------PA-GAFRATFEDKLLMSDIVFVRTWYPVSIPKFYNPVTSLLKPAGEKDSW 1146
Query: 924 QGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSR 983
+GM+T +LR + + + NKDSLYK I R R FN L IPK+LQ ALPF++KPK++ +
Sbjct: 1147 KGMRTTGQLRHDQGIKLKQNKDSLYKPIVREKRHFNKLHIPKALQKALPFKNKPKNLEKK 1206
Query: 984 KRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
+ + R AV+MEP E+K+ AL+ L +
Sbjct: 1207 GKTPKDQWRPAVIMEPHEKKISALLNALSTV 1237
Score = 970 (346.5 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 203/454 (44%), Positives = 282/454 (62%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEIN------KQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME++ K HRA+ SG A+K K +N ++D +K NP+AF S+V+ R+ RT
Sbjct: 3 MEEKEKKKHRAKHSGPKAEKKRKRHLNDLGIGEEEDARKRNPQAFTVQSAVRMARTFHRT 62
Query: 55 AEKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTV 114
+ + ++ HIP +DR+ E KS LIKCLIK++T+ K+ E+RGPVT+
Sbjct: 63 QDLKTKKHHIPVVDRTPLEPPPVVVVVVGPPKVGKSTLIKCLIKNFTRQKLVEIRGPVTI 122
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
VSGKKRRL +EC D+N MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +M
Sbjct: 123 VSGKKRRLTIIECGCDVNTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM 182
Query: 175 GVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
G+LTHL F TE+Y GAKLF LSG++ G+Y K++I NL FIS
Sbjct: 183 GILTHLDTFKNNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQKQEIHNLGRFIS 242
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
VMKF L+W+TSHPY+L DR ED+T PE + +N KCDR +++YGYLRG LK +++H+
Sbjct: 243 VMKFRPLTWQTSHPYVLADRMEDLTNPEDIRLNPKCDRKISLYGYLRGAYLKNKSQIHMP 302
Query: 295 GAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHF 354
G GD++++ V+ L DPC LP KK+ L +KEKL YAP+SG+G ++YDKDAVYID+
Sbjct: 303 GVGDFTVSDVSFLPDPCALPEQQKKRSLSEKEKLIYAPLSGVGGIVYDKDAVYIDLGGSH 362
Query: 355 VQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTE 412
+E ++V LV+SL +T ID K+ S +SLF D+T + D E
Sbjct: 363 AHENEEEEVRPNHELVQSLISTHSAIDTKMASSKVSLFM-------DSTPLGSE-DVGQE 414
Query: 413 YIHGKQYQTREGTSNGLGEKHVAEEMESLHEDAD 446
+ K+ + + + + K + +E E +D D
Sbjct: 415 IVMPKEERQMDLKTGRVRRKALFDEEEKKDDDDD 448
Score = 63 (27.2 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 541 EEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIK 597
EE + D D + +S+G S+GDD DDA E+L + G K
Sbjct: 440 EEKKDDDDDDDAVSDEEDEQEEEAMSEGGSDGDDEDDAEEESDEELLEAKMAPGSAK 496
Score = 55 (24.4 bits), Expect = 6.3e-104, Sum P(3) = 6.3e-104
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 521 FNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVS 580
F+ D DL + K + + +R + T + K V + EG+D+DD +
Sbjct: 675 FSADTAGALKWKEDL-TQKAAQAF--LRQQQATPNLRKLVYGTAVEDEDKEGEDADDELG 731
Query: 581 GDFE----DLETVEKHQG 594
G F D E+ +K G
Sbjct: 732 GLFHVSRPDKESKQKANG 749
Score = 47 (21.6 bits), Expect = 4.4e-103, Sum P(3) = 4.4e-103
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 563 NQVSKGNSEGDDSDD---AVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKK 619
++ K SE DD DD D D E +G ++ S N + NE + + L +
Sbjct: 525 SEEGKAASEEDDDDDDERTYGNDSSDSEFEAGSKGILE--SEQNEVVNEDKETKSQLLVR 582
Query: 620 ISLRKE 625
SL+K+
Sbjct: 583 -SLKKK 587
Score = 43 (20.2 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 24 SEINKQDKKKPNPKAFGFASSVKAKRSM--MRTAEKEQRRLHIP 65
S++ +++KKK K G + K KR + + E+E R P
Sbjct: 1 SKMEEKEKKKHRAKHSGPKAEKKRKRHLNDLGIGEEEDARKRNP 44
Score = 43 (20.2 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 584 EDLETVEKHQGHIKDNSGS-NAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNE 641
EDL T + Q ++ + N + Y +AVE K+ ++ D++ G FH +P++
Sbjct: 687 EDL-TQKAAQAFLRQQQATPNLRKLVYGTAVEDEDKE---GEDADDELGGLFHVSRPDK 741
Score = 41 (19.5 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 22/97 (22%), Positives = 39/97 (40%)
Query: 531 SYGDLKSSKGEEVYESIRDR--FVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLET 588
S GD + +E+ + DR F KA + V + E +D D EDL
Sbjct: 611 SEGDDEEKSHDELEAEVSDRKGFQHPQPKKADRTRPVEPESIEAEDDD------VEDLLR 664
Query: 589 VEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKE 625
E+ D S A +++ + ++ + LR++
Sbjct: 665 EEEEYEEKTDFSADTAGALKWKEDLTQKAAQAFLRQQ 701
Score = 38 (18.4 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 405 KDMDDDTEYIHGKQ-YQTREGTSNGLGEKHVAEEMESLHEDAD 446
KD DDD + + ++ Q E S G + ++ + E++D
Sbjct: 443 KDDDDDDDAVSDEEDEQEEEAMSEGGSD---GDDEDDAEEESD 482
Score = 37 (18.1 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 358 SEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLS-DATNNAKDMDDDTEYIHG 416
SE++ +++S QN DK+ + ++ +K ++L+ D+ N + ++E
Sbjct: 551 SEFEAGSKGILESEQNEVVNEDKETKSQLLVRSLKKKSLLTTDSGNCTAEEASESEV--- 607
Query: 417 KQYQTREGTSNGLGEKHVAEEMESLHEDADVKKG 450
E S G E+ +E+E+ E +D +KG
Sbjct: 608 ------ESLSEGDDEEKSHDELEA--EVSD-RKG 632
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 1041 (371.5 bits), Expect = 1.3e-204, Sum P(2) = 1.3e-204
Identities = 256/652 (39%), Positives = 363/652 (55%)
Query: 379 DKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEM 438
D + E++I S+ V S ++ D+T I + + K + +
Sbjct: 606 DSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKETSGAL 665
Query: 439 ESLHEDADVKKGEKFSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXX 498
+ ED K E AF + NL +L+YG T++++ +
Sbjct: 666 K-WKEDLSRKAAE-----AFLRQQQAAPNLRKLIYG-------TVTEDNEEEDDDTLEEL 712
Query: 499 XXFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSK 558
FR + +++ + D ++D CS+F EEV SIRD FVTG W
Sbjct: 713 GGLFRVN-QPDRECKHKAD----SLD-CSRFLVEAPHDWDL-EEVMNSIRDCFVTGKWE- 764
Query: 559 AAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLK 618
+K +E D+ + GDFEDLET + H+G N+ + IE E + ++ +
Sbjct: 765 --DDKDAAKVLAE----DEELYGDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEE 818
Query: 619 KISLRKEIDEKDGAK--FHCG-QPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELE 675
+ + +K +D+K K F E D +K E++ + Q+N AE D D+ R++ E
Sbjct: 819 ESAKKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYE 878
Query: 676 GFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKT 724
GFR G Y+R+ I +VP E V+ FDP +P+++GG+G E NVGY+Q +LK+
Sbjct: 879 GFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKS 938
Query: 725 RDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQN 784
RDPII S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FWGP+ P TG +AIQ+
Sbjct: 939 RDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQS 998
Query: 785 FSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEG 844
S FRI AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG
Sbjct: 999 VSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1058
Query: 845 KEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVE 904
+RTVSGIRGQ+KKA + P EG R +FED++LMSD+VFMR W V
Sbjct: 1059 AVIRTVSGIRGQIKKALRA------------P-EGAFRASFEDKLLMSDIVFMRTWYPVS 1105
Query: 905 IPRFYNPLTTAMQP-RDK-IWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLV 962
IP FYNP+T+ ++P +K W GM+T +LR H + + NKDSLYK I R+ + FN L
Sbjct: 1106 IPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLH 1165
Query: 963 IPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
IPK+LQ ALPF++KPK ++ + R AV+ EP ERK+ AL+ L +
Sbjct: 1166 IPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTV 1217
Score = 961 (343.3 bits), Expect = 1.3e-204, Sum P(2) = 1.3e-204
Identities = 208/463 (44%), Positives = 283/463 (61%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME + K HR + SG A K K + +++D +K NPKAF S+V+ RS RT
Sbjct: 1 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT 60
Query: 55 AEKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTV 114
+ + ++ HIP +DR+ E KS LI+CLI+++T+ K+ E+RGPVT+
Sbjct: 61 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI 120
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +M
Sbjct: 121 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM 180
Query: 175 GVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
GVLTHL F TE+Y GAKLF LSG++ G+Y ++I NL FI+
Sbjct: 181 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT 240
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG +LK +++H+
Sbjct: 241 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP 300
Query: 295 GAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHF 354
G GD++++ ++ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH 360
Query: 355 VQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNAKDMDDDT 411
V F + +VG T LV+SL +T ID K+ S ++LFS KP D N M +
Sbjct: 361 V-FQD--EVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEE 417
Query: 412 EYIHGKQYQTRE----GTSNGLGEKHVAEEMESLHEDADVKKG 450
+ + + R G + G+ EE + + ED ++ G
Sbjct: 418 KQMDLNTGRMRRKAIFGDEDESGDSD-DEEDDEMSEDDGLENG 459
Score = 45 (20.9 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 572 GDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRL--KKISLRK-EIDE 628
GD+ + S D ED E E G +S A E E ++ + K I RK E++E
Sbjct: 434 GDEDESGDSDDEEDDEMSED-DGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEE 492
Score = 42 (19.8 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 406 DMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQ 464
++++D+E + + E+ AEE + E+ D GEK ++ K+ G+
Sbjct: 489 ELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEK--GISGSKAAGE 545
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 975 (348.3 bits), Expect = 2.3e-196, Sum P(2) = 2.3e-196
Identities = 255/677 (37%), Positives = 363/677 (53%)
Query: 379 DKKLEKSIISLFSQKPN--VLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAE 436
++++E+ + S P+ + S+ D DDD E + + + N E E
Sbjct: 523 EEEMEEGKSAKKSSGPDSGLCSEEEEEDDDDDDDDEEDDSDMQEDEDKSKNPEEEDINTE 582
Query: 437 EMESLHEDADV---KKG--EKFSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXX 491
E+E E A K+G EK + A+ + NL +LVYG T+++E +
Sbjct: 583 EVEMGFETAGALRWKEGLAEKATE-AYLRQQRAAPNLRKLVYG-------TVAEEEEEGS 634
Query: 492 XXXXXXXXXFFRPKVEGNKKLR-EVLDGRLFNMD---------------EC---SKFNSY 532
F + E +KK+R +++D F D +C K+
Sbjct: 635 DDDEELGGLFKVSRPEKSKKVRADMMDCSRFQPDSSHDWDQEEMLASIRDCFVTGKWEED 694
Query: 533 GDLKS--SKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVE 590
D + + +E+Y D TG+ KA N+ GDD DD D +D E E
Sbjct: 695 KDAATLLKEDDELYGDFED-LETGEVHKAKTGNKDKAEEENGDDDDD----DDDDEEEEE 749
Query: 591 KHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKE 650
Q + D+ ++ +RRLK+ + D+ D F D +KE
Sbjct: 750 APQMKLDDDE----VQKNKRLEKKRRLKE-RFDAQYDDGDATYF-----------DDLKE 793
Query: 651 EIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIG 710
E++ + ++N E D+D+ R++ EGFR G Y+R+ I VP E V FDP +P ++GG+G
Sbjct: 794 EMQKQAELNRQEFEDVDDEIRVQYEGFRPGMYVRVEIPAVPCEFVTNFDPHYPTILGGLG 853
Query: 711 LGEENVGYMQ-----------VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTP 759
E NVGY+Q +LKTRDP+ILS+GWRRFQTIP+Y IED NG HR+LKYTP
Sbjct: 854 ASEGNVGYLQMRLKKHRWHNRILKTRDPLILSLGWRRFQTIPLYYIEDHNGRHRLLKYTP 913
Query: 760 EHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYP 819
EHMHC A WGP+ P TG +A+Q +A+FRI AT VVL+ + V I KK+KL+GYP
Sbjct: 914 EHMHCGATIWGPITPQGTGFLAVQTIGGVKANFRIAATGVVLDLDKSVSIVKKLKLIGYP 973
Query: 820 CKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREG 879
KIFK T I+ MF + LEVA+ EG +RTVSGI+GQ+KKA + P P G
Sbjct: 974 YKIFKNTCFIQGMFNTILEVAKFEGASIRTVSGIKGQIKKALRT-----P------P--G 1020
Query: 880 IARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQP--RDKIWQGMKTIAELRREHN 937
R TFEDR+LMSD+VF+R W V +PR YNP+T+ + P + W GM+T+ +L+ +
Sbjct: 1021 AFRATFEDRLLMSDIVFLRSWYPVSVPRLYNPVTSLLMPVGQKHTWSGMRTLGQLKHDLG 1080
Query: 938 LSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVM 996
+ +DSLYK I R+ R FNPL IPK LQ ALPF+SKPK + S+ + + R AV+
Sbjct: 1081 IHNKPKQDSLYKPIERQVRHFNPLRIPKELQKALPFKSKPKYMQSKGKTPRDLQRPAVIR 1140
Query: 997 EPQERKVHALIQHLKLI 1013
EP E+KV AL+ L +
Sbjct: 1141 EPHEKKVAALLDALTTV 1157
Score = 949 (339.1 bits), Expect = 2.3e-196, Sum P(2) = 2.3e-196
Identities = 200/458 (43%), Positives = 278/458 (60%)
Query: 1 MEQQPHKAHRARQSGSSA-KKISKSEIN---KQDKKKPNPKAFGFASSVKAKRSMMRTAE 56
ME++ K H+ + SG A KK K E +QD++K NP+AF S+V+ ++ R +
Sbjct: 4 MERKEQKRHQHKHSGPKAQKKNRKKEQGTEPEQDERKRNPRAFSVQSAVRMAKTFHRAQD 63
Query: 57 KEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVS 116
+ ++ HIP +DR+ E KS LI+CLIK++T+ K+ ++ GPVT+VS
Sbjct: 64 IKTKKHHIPLVDRTPLEPPPVVIVVMGPPKVGKSTLIRCLIKNFTRQKLSDICGPVTIVS 123
Query: 117 GKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
GKKRRL F+EC NDIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +MGV
Sbjct: 124 GKKRRLTFIECNNDINSMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMGV 183
Query: 177 LTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVM 236
LTHL F TE++ GAKLF LSG++ G+Y +++ NL FISVM
Sbjct: 184 LTHLDSFKNNKTLRKTKKRLKDRFWTEVFQGAKLFYLSGMVYGEYQIQEVKNLGRFISVM 243
Query: 237 KFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGA 296
KF L W+TSHPY+L DR ED+T PE + +N KCDR V++YGYLRG +K ++VHI G
Sbjct: 244 KFRPLVWQTSHPYVLADRMEDLTDPEAIRLNPKCDRTVSLYGYLRGTFMKNKSQVHIPGV 303
Query: 297 GDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDI-NDHFV 355
GD++++ V L DPCPLP KK+ L KE+L YAPM+G+G L+YDKDAVYID+ + H
Sbjct: 304 GDFTVSDVGFLPDPCPLPEVIKKRALNVKERLLYAPMAGVGGLVYDKDAVYIDMPSGHAK 363
Query: 356 QFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDAT--NNAKDMDDDTEY 413
+ E LV+SL T+ +D K+ S +SLF+ + + N ++ + E+
Sbjct: 364 KQQEEVRPTTELVQSLIGTQATLDAKMAASKVSLFTGTAALTPEEVEENGKQNPTESREW 423
Query: 414 IHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGE 451
Q + R GE E+ + +D + + E
Sbjct: 424 DENTQRERRRAVFADEGEDDGDEDDDDDDDDEEEVEDE 461
Score = 59 (25.8 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 39/153 (25%), Positives = 67/153 (43%)
Query: 530 NSYGDLKSSKGEEVYE--SIRDRFVTGDWSKAAQRNQ------VSKGNSEGDDSDDAVSG 581
+S +L+ S+GEE E S + + K+A+++ S+ E DD DD
Sbjct: 500 DSEDELEKSEGEESEEDESEEEDEEEMEEGKSAKKSSGPDSGLCSEEEEEDDDDDDDDEE 559
Query: 582 DFEDL-ETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPN 640
D D+ E +K + +++ + +E +E+A R K+ L ++ E + PN
Sbjct: 560 DDSDMQEDEDKSKNPEEEDINTEEVEMGFETAGALRWKE-GLAEKATEAY-LRQQRAAPN 617
Query: 641 EIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLE 673
LV E E + EL L +V+R E
Sbjct: 618 LRKLVYGTVAEEEEEGSDDDEELGGLFKVSRPE 650
Score = 43 (20.2 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 909 YNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRK 957
Y + R K + +K + E + V K Y+A+G++ +K
Sbjct: 1160 YKTKKAIAEQRTKHKEFLKQKEKQEAERQQRLKVEKKKTYRAMGQKEKK 1208
Score = 40 (19.1 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 399 DATNNAKDMDDDTEYIHGKQYQTREG 424
D + D DDD E + + + EG
Sbjct: 443 DGDEDDDDDDDDEEEVEDEDEENEEG 468
>UNIPROTKB|E9PTV4 [details] [associations]
symbol:Bms1 "Protein Bms1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074774 IPI:IPI00358418
Ensembl:ENSRNOT00000008741 ArrayExpress:E9PTV4 Uniprot:E9PTV4
Length = 1282
Score = 961 (343.3 bits), Expect = 2.7e-191, Sum P(2) = 2.7e-191
Identities = 204/453 (45%), Positives = 274/453 (60%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME HK HR + SG A+K K + +++D +K NPKAF S+V+ RS RT
Sbjct: 1 MEATDHKKHRKKHSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT 60
Query: 55 AEKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTV 114
+ + +R HIP +DR+ E KS LI+CLI+++T+ K+ E+RGPVT+
Sbjct: 61 QDLKTKRHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIRCLIRNFTRQKLSEIRGPVTI 120
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +M
Sbjct: 121 VSGKKRRLTIIECGCDINVMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM 180
Query: 175 GVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
GVLTHL F TE+Y GAKLF LSG++ G+Y ++I NL FI+
Sbjct: 181 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT 240
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG LK +++H+
Sbjct: 241 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAYLKTNSQIHMP 300
Query: 295 GAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHF 354
G GD+ + V+ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 GVGDFVASDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH 360
Query: 355 VQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNAKDMDDDT 411
F ++ G T LV+SL +T ID K+ S ++LFS +P D + M +
Sbjct: 361 -GFQTVEEAGPTHELVQSLISTHASIDAKMASSRVTLFSDSRPLGSEDVDSQGLWMPKEE 419
Query: 412 EYIHGKQYQTREGTSNGLGEKHVAEEMESLHED 444
+ + + + R G E+ ++ ED
Sbjct: 420 KQVDVETGRVRRKAVFGDTEEESGDDDSEGDED 452
Score = 915 (327.2 bits), Expect = 2.7e-191, Sum P(2) = 2.7e-191
Identities = 235/608 (38%), Positives = 335/608 (55%)
Query: 431 EKHVAEEMESLHEDADVKKGEKFS---ALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEV 487
E H E S+ +K E S A AF + NL +L+YG T++++
Sbjct: 649 EDHKEENSSSVETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYG-------TVTEDN 701
Query: 488 QXXXXXXXXXXXXFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESI 547
+ FR + +K + D ++D CS+F+ EEV SI
Sbjct: 702 EDEDGDASEELGGLFRVS-QPDKGCKHKAD----SLD-CSRFHVEAPHDWDL-EEVMNSI 754
Query: 548 RDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIEN 607
RD FVTG W +K +E D+ + GDFEDLET + H+G ++ S IE
Sbjct: 755 RDCFVTGKWE---DDKDAAKLLAE----DEELYGDFEDLETGDVHKGKPGLDTQSEDIEE 807
Query: 608 EYESAVER--------RLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQMN 659
E E E R K ++ ++++ E A++ G+ D +K E++ + Q+N
Sbjct: 808 EEEVKEETGPAEEESAREKHLNKKRKLKELFDAEYDEGESTYF---DDLKGEMQRQAQLN 864
Query: 660 IAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYM 719
AE D D+ TR++ EGFR G Y+R+ I ++P E V+ FDP +P+++GG+G E VGY+
Sbjct: 865 QAEFEDQDDETRVQYEGFRPGMYVRIEIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYV 924
Query: 720 Q-----------VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMF 768
Q +LK+RDP+I S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A F
Sbjct: 925 QMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATF 984
Query: 769 WGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTAL 828
WGP+ P TG +AIQ+ S FRI AT VVL+ + +KI KK+KL G+P KIFK T+
Sbjct: 985 WGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSF 1044
Query: 829 IKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDR 888
IK MF S LEVA+ EG +RTVSGIRGQ+KKA + P EG R +FED+
Sbjct: 1045 IKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRA------------P-EGAFRASFEDK 1091
Query: 889 ILMSDVVFMRGWADVEIPRFYNPLTTAMQP--RDKIWQGMKTIAELRREHNLSIPVNKDS 946
+LMS+ VF+ W+ I FY + + + P + W ++ I L + +K+S
Sbjct: 1092 LLMSEWVFIFNWSVCSIEAFYFNVKSLLNPCGSRRCWTVLRIIYYLLLLLGRYLECSKNS 1151
Query: 947 LYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVMEPQERKVHA 1005
++K I R+ + FN L IPK+LQ ALPF++KPK ++ + R AV+ EP ERKV A
Sbjct: 1152 VFKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLA 1211
Query: 1006 LIQHLKLI 1013
L+ L I
Sbjct: 1212 LLDALSTI 1219
Score = 46 (21.3 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 14/74 (18%), Positives = 34/74 (45%)
Query: 562 RNQVSKGNSEGDDSDDAVSGDFEDL---ETVEKHQG--HIKDNSGSNAIENEYESAVERR 616
R + G++E + DD GD +++ + +E +++ G+ + +Y + +
Sbjct: 430 RRKAVFGDTEEESGDDDSEGDEDEMSDDDGMENGSSDDEVEEEEGAKSSSCKYTTVRGHK 489
Query: 617 LKKISLRKEIDEKD 630
K+ ++E E D
Sbjct: 490 RPKLEEQEEDSEAD 503
Score = 46 (21.3 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 594 GHIKDNSGSNAIE-NEYESAVERRLKKISLRKEIDEKDGAKFH-CGQPNEIGLVDKMKEE 651
G ++ SG + E +E E + + ++ S E++E++GAK C G EE
Sbjct: 436 GDTEEESGDDDSEGDEDEMSDDDGMENGSSDDEVEEEEGAKSSSCKYTTVRGHKRPKLEE 495
Query: 652 IEFRKQMNIAELNDLDE 668
E + ++ D D+
Sbjct: 496 QEEDSEADLPAFADSDD 512
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 981 (350.4 bits), Expect = 1.5e-190, Sum P(2) = 1.5e-190
Identities = 212/462 (45%), Positives = 289/462 (62%)
Query: 7 KAHRARQSGSSAKKISKSEINKQDK----KKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
K HR ++G+ A K +++ K ++ K NPKAF ++ + R +R ++E +R+
Sbjct: 9 KVHRVSKAGAKANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRV 68
Query: 63 HIPTIDRSYG--EXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKR 120
++P IDRS E K+ LI+ LIK+YT+ + +V+GP+T+V+GKKR
Sbjct: 69 NLPVIDRSGTAVETPPYVIAVVGPPKCGKTTLIRSLIKNYTRHSISDVKGPITIVAGKKR 128
Query: 121 RLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
RL F+EC ND+N MID AK ADL LLLIDAS+GFEMETFEFLN+++ HG P V+G+LTHL
Sbjct: 129 RLTFIECNNDLNSMIDTAKVADLVLLLIDASYGFEMETFEFLNVLKTHGFPKVIGILTHL 188
Query: 181 XXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS 240
F TE+Y GAKLF LSG+I GKY K +I NLA FISV F
Sbjct: 189 DGFKNNKKLKKTKKKFKDRFWTEIYEGAKLFYLSGIIHGKYPKVEIHNLARFISVANFIP 248
Query: 241 LSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYS 300
LSWR +HPY+ VDRFED T PE V N K DRN+ +YGY+RG LK KVHI G+GDY
Sbjct: 249 LSWRNTHPYVYVDRFEDTTEPELVRQNPKIDRNICLYGYVRGTYLKPHMKVHIPGSGDYL 308
Query: 301 LAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFS-- 358
+ VT L DPCPLP+ +KK L +KE+L YAPM +G++LYDKDAVYI+I + + FS
Sbjct: 309 MKSVTSLPDPCPLPTE-RKKTLNEKERLLYAPMGDIGNILYDKDAVYINIPESKLNFSKA 367
Query: 359 --EYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNA----KDMDDDTE 412
E + G ++VK LQNT++ ID+K+E S +SLFS +P + TNN +++DD
Sbjct: 368 KEEGEGEGESMVKDLQNTQFSIDEKMEHSELSLFSNRPPI--KFTNNTYTQIEEIDDKDY 425
Query: 413 Y-IHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKF 453
Y G++ + + G K V E +E +D V++ KF
Sbjct: 426 YDSDGEKDEEEQEEQEEKGTKKV-EVVEE--KDGRVRRKVKF 464
Score = 888 (317.7 bits), Expect = 1.5e-190, Sum P(2) = 1.5e-190
Identities = 208/519 (40%), Positives = 300/519 (57%)
Query: 509 NKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKG 568
++ ++E+L + N +E G + +EV + TG ++ + +K
Sbjct: 661 SEDIKELLAIKFVNRNELETTGLIGKNNAEGEDEVLFGDFEDLETGKKYDSSS-STTTKN 719
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDE 628
N E D G+ +D + + Q K+N N+IENE E + KK K+I E
Sbjct: 720 NKEND------KGEEDDDDDDDNSQSDDKNNK-ENSIENERE---RNKSKK---EKQI-E 765
Query: 629 KDGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIH 688
K AK+ Q NE ++ EE++ ++ +N E + D+ R + EGF G Y+R+
Sbjct: 766 KINAKY---QENEKDFQGELNEEVKRQRAINEKEFENDDQFYRQKYEGFPIGVYVRIEFE 822
Query: 689 DVPFEMVEYFDPCHPVLVGGIGLGEENVG-----------YMQVLKTRDPIILSIGWRRF 737
+P E EYFDP PV+VGG+ EEN+G + ++LK+ DP+++S+GWRRF
Sbjct: 823 KIPCEFSEYFDPKFPVVVGGLLSSEENLGMINVSLKKHRWHKRILKSNDPLMISVGWRRF 882
Query: 738 QTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITAT 797
QTI +Y+ +D NG +RMLKYTPEHMHC A F+GPL PP TG + N +NNQA FR++AT
Sbjct: 883 QTIVLYSTKDINGRNRMLKYTPEHMHCHASFYGPLTPPGTGFIGFTNANNNQAGFRVSAT 942
Query: 798 AVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQV 857
VL+ + + + KK+KL+G P KI KKT + MFTS LEVA+ G +RTVSGIRGQ+
Sbjct: 943 GTVLDLDSSINVVKKLKLIGQPDKIMKKTCFVNGMFTSRLEVAKFVGATIRTVSGIRGQI 1002
Query: 858 KKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQ 917
KK + P EG R TFEDR+L SD++F+R W + RFYNP+T+ +Q
Sbjct: 1003 KKPL-----SHP--------EGSFRATFEDRLLPSDIIFLRTWYTITPTRFYNPVTSLLQ 1049
Query: 918 PRDKIWQGMKTIAELRREHNLSIPVNKDSLYKA-IGRRPRKFNPLVIPKSLQAALPFESK 976
+ W+GMKT+ +LR E+NLS PV KDS Y+ I R +KF L IP LQ+ LPF+ K
Sbjct: 1050 EKKTHWEGMKTVGQLRFENNLSAPVKKDSSYQGKIERDEKKFKELRIPNKLQSQLPFDLK 1109
Query: 977 PKDIPSRKRL--FLENSRAVVMEPQERKVHALIQHLKLI 1013
PK K L +SR ++EP E++V L++ L+ I
Sbjct: 1110 PKGTKIIKNADDALLSSRVNIIEPHEKQVADLMRRLESI 1148
Score = 47 (21.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVE 614
NS+ ++ DD GD ED E + +N S+ +E + + +E
Sbjct: 474 NSDDEEEDDDEDGDEEDEEEDDDDDD---ENVNSSKVEFDDDDDLE 516
Score = 45 (20.9 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 598 DNSGSNAIENEYESAVERRLKKISLRKEIDEKDG 631
D+ G E E E E+ KK+ + ++EKDG
Sbjct: 427 DSDGEKD-EEEQEEQEEKGTKKVEV---VEEKDG 456
Score = 42 (19.8 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 562 RNQVSKGNSEGDDSDDAVSGDFEDL---ETVEKHQGHIKDNSGSNA 604
+N+++ + E DD D+ D ED E E + + +G +A
Sbjct: 532 KNKLNLEDEEDDDEDEDEEDDDEDEDEDEDDEDEEEEYDEETGESA 577
Score = 42 (19.8 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 398 SDATNNAKDMDDDTEYIH 415
+D + KD+ D ++YIH
Sbjct: 637 TDKEESTKDLLDSSKYIH 654
Score = 37 (18.1 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 415 HGKQYQTREGTSNGLGEKHVAEEME--SLHEDADVKKGEKFSALAFKK 460
H KQ + K + +E + ++D +KK K L KK
Sbjct: 1134 HEKQVADLMRRLESIKNKKIEKEQQRKQQYQDEKLKKQSKIDVLKEKK 1181
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 904 (323.3 bits), Expect = 7.6e-189, Sum P(3) = 7.6e-189
Identities = 197/461 (42%), Positives = 270/461 (58%)
Query: 3 QQPHKAHRARQSGSSA--KKI-SKSEINKQDK----KKPNPKAFGFASSVKAKRSMMRTA 55
Q K HRARQSG A KK+ +K + N+++ ++ NPKAF S+ +A+R+ R
Sbjct: 7 QDKRKQHRARQSGVKADKKKLKAKKDSNQKEPELTARQRNPKAFAINSAQRAERNFRRKE 66
Query: 56 EKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVV 115
+ ++ HIP +D++ K+ LIK LIK +T+ V +++GP+T+V
Sbjct: 67 DLTAKKQHIPVVDQTPNVPPPVLIAVVGPPKVGKTTLIKDLIKSFTRTNVTDIKGPITIV 126
Query: 116 SGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
+ KKRR+ +EC ND+N MID AK ADL LLL DAS+GFEME FEFLN+ Q HG+P +MG
Sbjct: 127 TSKKRRITLLECNNDVNSMIDVAKCADLVLLLCDASYGFEMEIFEFLNICQVHGMPKIMG 186
Query: 176 VLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISV 235
VLTHL F TE+Y GAKLF LSGL+ G+Y + ++ NL FISV
Sbjct: 187 VLTHLDMIKNPKQLRKRKKELKHRFWTEVYDGAKLFYLSGLLHGEYLRNEVKNLGRFISV 246
Query: 236 MKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAG 295
MKF L WR +H Y+LVDR EDVT +RV + KCDR V +YGY+RG LK+ VHIAG
Sbjct: 247 MKFRPLQWRGAHSYLLVDRIEDVTNTDRVRRDPKCDREVVLYGYVRGVPLKQEHMVHIAG 306
Query: 296 AGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFV 355
GD + + + DPCPLP KK+ L +KE+L YAPMSG+G ++YDKDAVYI++
Sbjct: 307 LGDARIDELNVIPDPCPLPGTEKKRSLLEKERLLYAPMSGVGGIVYDKDAVYIELQGSHS 366
Query: 356 QFSEYQDVGVT----LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNAKDMDDD 410
+ Q LV L + K ID+++E+ LFS KP D N+ D ++D
Sbjct: 367 HKEQEQTAEAAEQAELVNKLIDKKATIDEQMEQQEFRLFSDAKPIKSKDFRNDQDDEEED 426
Query: 411 TEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGE 451
E + + +G +GL EE + DAD +GE
Sbjct: 427 EE-AESSENEDDDGEDSGLDAADSEEEQQD-EFDADDWRGE 465
Score = 816 (292.3 bits), Expect = 7.6e-189, Sum P(3) = 7.6e-189
Identities = 174/385 (45%), Positives = 243/385 (63%)
Query: 646 DKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVL 705
+ +K E + + ++N +E LD R+++EG+R G Y+RLG +P E +E FD +PVL
Sbjct: 734 EDLKAEAQRQSELNKSEFAHLDNEFRIQIEGYRPGLYVRLGFKQLPAEFIENFDASYPVL 793
Query: 706 VGGIGLGEENVGYM-----------QVLKTRDPIILSIGWRRFQTIPVYA-IEDRNGWHR 753
VG + + EENVGY+ ++LKT DP+I+S+GWRRFQT+ +YA +ED N R
Sbjct: 794 VGALNMTEENVGYVNCKVKKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVED-NFRQR 852
Query: 754 MLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQAS-----FRITATAVVLEFNHEVK 808
LKYTP H+ C FWGP+ P TG +A+Q +Q FRI AT V E + +
Sbjct: 853 YLKYTPNHVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAATGCVTEVDKSSQ 912
Query: 809 IKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQ 868
I KK+KLVG+P KI+KKTA +KDMF S LEVA+ EG +++TVSGIRGQ+KKA +
Sbjct: 913 IMKKLKLVGHPFKIYKKTAFVKDMFNSSLEVAKFEGAKIKTVSGIRGQIKKAH-----HT 967
Query: 869 PKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKI--WQGM 926
P EG R TFED+IL+SD+VF R W VE+PRFY P+++ + P D+ WQGM
Sbjct: 968 P--------EGSYRATFEDKILLSDIVFCRTWFRVEVPRFYAPVSSLLLPLDQKSQWQGM 1019
Query: 927 KTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRL 986
KT+ +L+RE + DS+Y I R+ + F PL IPK+LQ ALP++ KPK P +
Sbjct: 1020 KTLGQLKRERAVQNAAQPDSMYTTIVRKEKIFRPLTIPKALQRALPYKDKPKLGPENPKA 1079
Query: 987 FLENSRAVVMEPQERKVHALIQHLK 1011
LE AVV P E+KV +++ ++
Sbjct: 1080 ALERV-AVVNSPYEQKVSKMMKMIE 1103
Score = 149 (57.5 bits), Expect = 7.6e-189, Sum P(3) = 7.6e-189
Identities = 59/226 (26%), Positives = 99/226 (43%)
Query: 402 NNAKDMDDDTEYIHG-KQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSAL-AFK 459
N+ ++ D + + G ++YQ+ EE L + K A AF
Sbjct: 466 NSEEEEDAEEDASSGDEEYQSLGNVKTSNESDSDDEEARVLASNMSWKTNLAQKARDAFL 525
Query: 460 KSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLREVLDGR 519
+ + NL++LVYG + + +E + F +V K+ + D
Sbjct: 526 QRHSESKNLMRLVYGVYNQSEHS-RQEAEAEDDSEEELGGLF---RVAAKKQSLKQSDQD 581
Query: 520 LFNMDECSKFNSYGDL-KSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDA 578
+ + DE F GD + E+ E I++ FVTG W + + K + + D++
Sbjct: 582 IRDKDERCFFEYQGDATRDWLAEDNKELIKNCFVTGKWKASEDAENLLKMD-DMSDAESE 640
Query: 579 VSGDFEDLETVEKHQGHIK-DNSGSNAIEN---EYESAVERRLKKI 620
V GDFEDLET E+H G K ++ G + EN E SA +R+L ++
Sbjct: 641 VYGDFEDLETGEQHSGKPKAEDGGESEEENSKPEDSSAPKRKLTRV 686
Score = 64 (27.6 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
Identities = 17/95 (17%), Positives = 46/95 (48%)
Query: 566 SKGNSEGDDSDDAVSGD---FEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISL 622
+ G +G++ + ++GD +EDL+ + Q + + ++ ++NE+ +E + +
Sbjct: 713 NSGEGKGEEDNGRITGDHSFYEDLKAEAQRQSELNKSEFAH-LDNEFRIQIEGYRPGLYV 771
Query: 623 R---KEIDEKDGAKFHCGQPNEIGLVDKMKEEIEF 654
R K++ + F P +G ++ +E + +
Sbjct: 772 RLGFKQLPAEFIENFDASYPVLVGALNMTEENVGY 806
Score = 49 (22.3 bits), Expect = 4.1e-84, Sum P(2) = 4.1e-84
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 547 IRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSG-DFEDLETVEKHQGHIKDNSGSNAI 605
I+ + D + + +E DD +D SG D D E ++ + D G N+
Sbjct: 411 IKSKDFRNDQDDEEEDEEAESSENEDDDGED--SGLDAADSEEEQQDEFDADDWRGENSE 468
Query: 606 ENE 608
E E
Sbjct: 469 EEE 471
Score = 37 (18.1 bits), Expect = 7.6e-83, Sum P(2) = 7.6e-83
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 EQQPHKAHRARQSGSSAKKISKSEINKQDKKK 33
EQ K +A G S ++ SK E + K+K
Sbjct: 652 EQHSGKP-KAEDGGESEEENSKPEDSSAPKRK 682
Score = 37 (18.1 bits), Expect = 7.6e-83, Sum P(2) = 7.6e-83
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 610 ESAVERRLKKISLRKEIDEKDGAKFHCGQ--PNEIGLVDKMKEEIEFRKQMNI 660
+S V+ KK+ +K+ ++K+ + Q P + + E FR++ ++
Sbjct: 17 QSGVKADKKKLKAKKDSNQKE-PELTARQRNPKAFAINSAQRAERNFRRKEDL 68
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 883 (315.9 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 238/656 (36%), Positives = 343/656 (52%)
Query: 389 LFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESL-----HE 443
L + D+ N+ D ++D ++ GK + E A+ L E
Sbjct: 427 LIKEDEGAFDDSDVNSADENEDVDFT-GKIGAINNEDESDNEEVAFADSDSDLGGQFDDE 485
Query: 444 DADV--KKG-EKFSALAFKKSFGQCTNLIQLVYGKS-TPTSATLSKEVQXXXXXXXXXXX 499
D+++ K+G +ALA+ +S + N+ ++ Y +S +P A + +
Sbjct: 486 DSNLRWKEGLASKAALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGESAKSSESDLVV 545
Query: 500 XFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGE--EVYESIRDRFVTGDWS 557
E K+ +V + + + E S D S K E ++ ++ RF+TG
Sbjct: 546 S---DDEEDFFKVSKVANESISSNHE-KLMESESDRLSKKWENPQLLAQLKSRFITGSLL 601
Query: 558 KAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGH-IKDNSGSNAI-ENEYESA--- 612
+ + G E D+ GDFEDLE E + ++++SGS+ ENE ESA
Sbjct: 602 DSIE------GQEEVSQDDE--EGDFEDLEDEENSSDNEMEESSGSSVTAENE-ESADEV 652
Query: 613 ---VERR---LKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDL 666
ER KK LR +E+D + ++ + KE+I + +N D+
Sbjct: 653 DFQTEREENARKKEELRLRFEEEDRGD---PEKKDVDWYTEEKEKIARQLVINREAFEDM 709
Query: 667 DEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQV----- 721
D +R E+EG+R GTY+R+ I+DVPFE VE+FD +PV+VGG+ E+ G +QV
Sbjct: 710 DPESRAEIEGYRAGTYVRIVINDVPFEFVEHFDSRYPVVVGGLLPNEQRYGLVQVRIKRH 769
Query: 722 ------LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPP 775
LKT DP+I S+GWRRFQ+IPVY+I D +RMLKYTPEHMHC F+GP P
Sbjct: 770 RWHKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHCFGTFYGPFVAP 829
Query: 776 QTGVVAIQNFSNNQA---SFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDM 832
+G A+Q+ +N+ A SFRI AT VL + I KK+KL G P KIFK TA IK M
Sbjct: 830 NSGFCAVQSVANSFAKAGSFRIAATGSVLNIDQSTDIVKKLKLTGVPYKIFKNTAFIKKM 889
Query: 833 FTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMS 892
F+S LEVA+ EG +RTVSGIRGQVKKA +E G+ R TFED+ILMS
Sbjct: 890 FSSPLEVAKFEGANIRTVSGIRGQVKKAVDQEHGH-------------FRATFEDKILMS 936
Query: 893 DVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIG 952
D+VF+R W V++ +F +T ++ W GM+ E+R E L P+ +S Y+ I
Sbjct: 937 DIVFLRAWYPVQVRKFCTMVTNLLETDKTEWNGMRLTGEVRHELGLKTPLRPNSQYQEIV 996
Query: 953 RRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVVMEPQERKVHALIQ 1008
R R FNPL +P SLQA LPF S+ K + R + R V++ +ERKV L+Q
Sbjct: 997 RPSRHFNPLKVPASLQAQLPFNSRQKALRPRSKPTYMQKRTVLLNAEERKVRDLLQ 1052
Score = 865 (309.6 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 190/467 (40%), Positives = 263/467 (56%)
Query: 7 KAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPT 66
K H A+ SG A+K +++ NPKAF AS+ + R MRTA+ Q++LH+P
Sbjct: 5 KGHYAKHSGPKAEKKKLKKVSDGSASN-NPKAFAVASAGRMARQAMRTADISQKKLHVPM 63
Query: 67 IDRSYGEXXXXXXXXXXXX-XXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFV 125
+DR+ E KS LIK L++ Y+K + ++ GP+TVV+GKKRR+ F+
Sbjct: 64 VDRTPDEAPPPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFL 123
Query: 126 ECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLXXXXX 185
ECPND++ MID AK ADL LLLIDA+ GFEMET EFLN++ HG+P +MGVLTHL
Sbjct: 124 ECPNDLSSMIDVAKIADLVLLLIDANFGFEMETMEFLNILAPHGMPRIMGVLTHLDLFKK 183
Query: 186 XXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRT 245
F TELY GAKLF LSG++ G+Y ++I NL+ FISVMKF L WR
Sbjct: 184 TSTLREAKKRLKHRFWTELYQGAKLFYLSGVLNGRYPDREILNLSRFISVMKFRPLRWRN 243
Query: 246 SHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKK-GTKVHIAGAGDYSLAGV 304
HPY+L DR ED+T P + N K R + +YGYL G NL K VHI G GD+ + V
Sbjct: 244 QHPYLLADRMEDLTLPVDIEQNPKVGRKITLYGYLHGTNLPKHDASVHIPGVGDFVTSDV 303
Query: 305 TGLADPCPLPSAAK--KKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQD 362
+ L DPCP P A K ++ L +K+KL Y PM+ +G +L+DKD VYI++ E +
Sbjct: 304 SSLEDPCPPPDADKVRRRRLSEKQKLIYGPMADIGGILFDKDRVYIEVPTSNFSKDENSE 363
Query: 363 VGV--TLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQ 420
G +V LQ + P+ S + LFS SDA + +D ++ I +
Sbjct: 364 AGFGERMVMQLQEAQQPLGVD-GNSGLQLFSN-----SDAIDT---VDRESSEIDNVGRK 414
Query: 421 TREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQCTN 467
TR + GL + + +E E +D+DV ++ + F G N
Sbjct: 415 TRRQPT-GLINQELIKEDEGAFDDSDVNSADENEDVDFTGKIGAINN 460
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 1681 (596.8 bits), Expect = 5.4e-173, P = 5.4e-173
Identities = 387/1031 (37%), Positives = 586/1031 (56%)
Query: 12 RQSGSSAKKISKSEINKQDKKKP-----NPKAFGFASSVKAKRSMMRTAEKEQRRLHIPT 66
+ G + K + K+++K+P N KAF F S+V A +++ R A+ +++ H+
Sbjct: 11 KNKGHNVHKTG-GKAKKRNEKEPRVKGNNLKAFTFHSAVSAGKAIRRAADLNEKKKHVLM 69
Query: 67 IDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVE 126
+DR E K+ L++ L+K+Y + E+ GPVT+V+GKKRR+QF+E
Sbjct: 70 MDRKPIETPPIIVAIVGPSKVGKTTLLRGLVKYYLRDGFGEINGPVTIVTGKKRRVQFIE 129
Query: 127 CPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLXXXXXX 186
NDIN MID AK ADL LL++DAS+GFEMETFEFLN+ Q HG+P +MGVL HL
Sbjct: 130 VKNDINHMIDIAKVADLVLLMVDASYGFEMETFEFLNICQVHGMPRIMGVLNHLDLLDGI 189
Query: 187 XXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTS 246
F TELY GAKLF ++G++ G+Y +I NL FISVMKF + W+ +
Sbjct: 190 SRVNKTKKILKHRFWTELYQGAKLFYMTGMMHGQYKYNEIHNLCRFISVMKFRPMVWKDA 249
Query: 247 HPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTG 306
HPY+L DRFED+T E + + DR++A+YG++ G +LK + +H+ G GD ++ VT
Sbjct: 250 HPYVLCDRFEDITNVETLRTDPLIDRHIAMYGWVHGAHLKNHSSIHVPGVGDMRISNVTS 309
Query: 307 LADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDI-NDHFVQFSEYQDVGV 365
L DPCPLP KK+ L +KE+ YAP SGLG ++YDKDA+YI+ N H F+ +D G
Sbjct: 310 LPDPCPLPDEIKKRALNEKERKVYAPFSGLGGVIYDKDAIYIESKNAH--NFNRKRD-G- 365
Query: 366 TLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDM-DDDTEYIHGKQYQTREG 424
LV++L+ K ID KL+KS + L + D ++ + ++D E + + +Q E
Sbjct: 366 -LVEALEGVKSGIDDKLKKSSLQLLGDSVALDIDQESDWPEPGEEDEEDLDEEDFQDEEE 424
Query: 425 TSNGLGEKHVAEEMESLHEDADVKKGEKFSALA---FKKSFGQCTNLIQLVYGKSTPTSA 481
+ E E++ + ++ D + ++ A +++S N ++LVYG T
Sbjct: 425 DED---EDEDEEDVGVVKKEEDQNEWSNLASKAVAQYRESQNVKVNWMKLVYGGEKVTKD 481
Query: 482 TLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLREVLDGRLFNM--DECSKFNSYGDLKSSK 539
+ + F + + K + DG + M CS + DL
Sbjct: 482 EKEETIDD-----------LFVVRKQNQKSEDDQEDGFGYAMLPASCSTSTNDWDL---- 526
Query: 540 GEEVYESIRDRFVTGDWSKA-AQRNQVSKG-NSEGDDSDDAVSGDFEDLETVEKHQGHIK 597
EEV +SI D FVTG+W++ A+ +Q+ K S+ +D+DD ED++ E+ G
Sbjct: 527 -EEVRKSIADSFVTGNWTEDDAEEDQLKKEIGSDNEDNDDG-----EDMDD-EEEDGD-D 578
Query: 598 DNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEFRKQ 657
D +G N + E E+ R+ K++ + ++ ++ F+ +K K E+ +
Sbjct: 579 DETGGNEKKEESEADKSRKQKRLEAKIKLKQR----FNDDYDETCKFYNKAKNEMTEQAD 634
Query: 658 MNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVG 717
+N +DE R ++EGFR+G Y+R+ I VP E V++FD P ++GG+ GE+N+G
Sbjct: 635 LNRQVFEGMDEEEREKVEGFRSGRYVRIEISSVPCEFVDHFDTSAPYIIGGLLPGEQNMG 694
Query: 718 YMQV-----------LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLA 766
+Q LK+RDP+I+S GWRRFQTI +Y+++D N R LKYTPEHMHC A
Sbjct: 695 VVQARVKRHRWFERTLKSRDPLIISCGWRRFQTIAIYSVQDHNMRLRFLKYTPEHMHCHA 754
Query: 767 MFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKT 826
F+GP+ TG++AIQ+ ++ +RI AT VL+ + ++ KK+KL+G+P KIFKKT
Sbjct: 755 SFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQVVKKLKLIGHPEKIFKKT 814
Query: 827 ALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFE 886
A +K MF S LEVA+ EG +RTV+GIRGQ+KKA K P EG R TFE
Sbjct: 815 AFVKGMFNSALEVAKFEGATIRTVAGIRGQIKKAIKA------------P-EGAFRATFE 861
Query: 887 DRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNKDS 946
D+ILM D+VF+R W V IPRFY P++ +Q W GM+T+ ++R E + P NKDS
Sbjct: 862 DKILMRDIVFLRSWVTVPIPRFYTPISDHLQASAAAWIGMRTVGKMRSELGMGTPQNKDS 921
Query: 947 LYKAIGRRPRKFNPLVIPKSLQAALPFESKP----KDIPSRKRLFLENSRAVVMEPQERK 1002
YK I R+ + P+ +P LQ +LPF+ KP ++ + L ++ AVV+EP+E K
Sbjct: 922 DYKPIVRKEFESAPIHLPPKLQKSLPFKMKPTYQAREEKEKDSLVARHT-AVVLEPEEAK 980
Query: 1003 VHALIQHLKLI 1013
+ L+ +
Sbjct: 981 RERFMDMLRTL 991
Score = 892 (319.1 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 218/649 (33%), Positives = 342/649 (52%)
Query: 2 EQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRR 61
E Q +K H ++G AKK ++ E K N KAF F S+V A +++ R A+ +++
Sbjct: 8 EGQKNKGHNVHKTGGKAKKRNEKEPRV---KGNNLKAFTFHSAVSAGKAIRRAADLNEKK 64
Query: 62 LHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRR 121
H+ +DR E K+ L++ L+K+Y + E+ GPVT+V+GKKRR
Sbjct: 65 KHVLMMDRKPIETPPIIVAIVGPSKVGKTTLLRGLVKYYLRDGFGEINGPVTIVTGKKRR 124
Query: 122 LQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLX 181
+QF+E NDIN MID AK ADL LL++DAS+GFEMETFEFLN+ Q HG+P +MGVL HL
Sbjct: 125 VQFIEVKNDINHMIDIAKVADLVLLMVDASYGFEMETFEFLNICQVHGMPRIMGVLNHLD 184
Query: 182 XXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSL 241
F TELY GAKLF ++G++ G+Y +I NL FISVMKF +
Sbjct: 185 LLDGISRVNKTKKILKHRFWTELYQGAKLFYMTGMMHGQYKYNEIHNLCRFISVMKFRPM 244
Query: 242 SWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSL 301
W+ +HPY+L DRFED+T E + + DR++A+YG++ G +LK + +H+ G GD +
Sbjct: 245 VWKDAHPYVLCDRFEDITNVETLRTDPLIDRHIAMYGWVHGAHLKNHSSIHVPGVGDMRI 304
Query: 302 AGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDI-NDHFVQFSEY 360
+ VT L DPCPLP KK+ L +KE+ YAP SGLG ++YDKDA+YI+ N H F+
Sbjct: 305 SNVTSLPDPCPLPDEIKKRALNEKERKVYAPFSGLGGVIYDKDAIYIESKNAH--NFNRK 362
Query: 361 QDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDM-DDDTEYIHGKQY 419
+D G LV++L+ K ID KL+KS + L + D ++ + ++D E + + +
Sbjct: 363 RD-G--LVEALEGVKSGIDDKLKKSSLQLLGDSVALDIDQESDWPEPGEEDEEDLDEEDF 419
Query: 420 QTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALA---FKKSFGQCTNLIQLVYGKS 476
Q E + E E++ + ++ D + ++ A +++S N ++LVYG
Sbjct: 420 QDEEEDED---EDEDEEDVGVVKKEEDQNEWSNLASKAVAQYRESQNVKVNWMKLVYGGE 476
Query: 477 TPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLREVLDGRLFNM--DECSKFNSYGD 534
T + + F + + K + DG + M CS + D
Sbjct: 477 KVTKDEKEETIDD-----------LFVVRKQNQKSEDDQEDGFGYAMLPASCSTSTNDWD 525
Query: 535 LKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKG-NSEGDDSDDAVSGDFEDLETVEKHQ 593
L+ + + + D A+ +Q+ K S+ +D+DD D E+ + +
Sbjct: 526 LEEVRKSIADSFVTGNWTEDD----AEEDQLKKEIGSDNEDNDDGEDMDDEEEDGDDDET 581
Query: 594 GHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEI 642
G + S A ++ + +E ++K + R D + KF+ NE+
Sbjct: 582 GGNEKKEESEADKSRKQKRLEAKIK-LKQRFNDDYDETCKFYNKAKNEM 629
Score = 37 (18.1 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 591 KHQGHIKDNSGSNAIENEYESAVERRLKKISLRKE 625
K Q +IK+ E ES +R K I RK+
Sbjct: 997 KKQENIKEGYKKRKAEEMAESEAKRE-KSIKSRKK 1030
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 834 (298.6 bits), Expect = 5.1e-164, Sum P(2) = 5.1e-164
Identities = 200/503 (39%), Positives = 284/503 (56%)
Query: 533 GDLKSSKGEEVYESIRDRFVTGDWS-KAAQRNQVSKG--NSEGDDS--DDAVSGDFEDLE 587
GD + E+V ++ D GD + + + +V G + +G+ S DD G EDLE
Sbjct: 639 GDADDGEDEDVEDAF-DEDDEGDGAFEDLETGEVFNGIKDDDGEASGEDDEKDGP-EDLE 696
Query: 588 TVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDK 647
K+ ++ +E E R + + K+ DGA+ + E D
Sbjct: 697 AERARNAKRKEE-----LKLRFEE--EDR-EGFANSKDNSRHDGAEPE-EEFGEDEWYDA 747
Query: 648 MKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVG 707
K +++ + +N AE LD +R EG+R GTY R+ + VP E F+P +PV+VG
Sbjct: 748 QKAKMQKQADINRAEFEALDPNSRARAEGYRAGTYARIVLERVPCEFSTKFNPRYPVIVG 807
Query: 708 GIGLGEENVGYMQV-----------LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLK 756
G+ E+ GY+QV LK+ DP+I S+GWRRFQT+P+Y+ D +RMLK
Sbjct: 808 GLAPTEDRFGYVQVRIKRHRWHKKILKSNDPLIFSLGWRRFQTLPMYSTSDNRTRNRMLK 867
Query: 757 YTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLV 816
YTPEHMHC F+GPL P TG +Q+FSN FRI AT VVL + +I KK+KL
Sbjct: 868 YTPEHMHCFGTFYGPLVAPNTGFCCVQSFSNKNPGFRIAATGVVLSVDEHTEIVKKLKLT 927
Query: 817 GYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQP 876
G KIFK TA IKDMF S LE+A+ EG +RTVSGIRGQ+K+A ++P
Sbjct: 928 GVAYKIFKNTAFIKDMFNSSLEIAKFEGAAIRTVSGIRGQIKRAL-----SKP------- 975
Query: 877 REGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKI-----WQGMKTIAE 931
+G R TFED+ILMSD+VF+R W ++ RFYNP+T + + + W+GM+ E
Sbjct: 976 -DGCFRATFEDKILMSDIVFLRAWYPIKPHRFYNPVTNLLDIEEGLSGDGGWKGMRLTGE 1034
Query: 932 LRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRK-RLFLEN 990
+RRE + P+NKDS Y+ I R R FNPL +P+ L A LPF+S+ + SRK + +L+
Sbjct: 1035 VRREQGIPTPLNKDSAYRKIERPERHFNPLRVPRQLAAELPFKSQITRMKSRKDKTYLQK 1094
Query: 991 SRAVVMEPQERKVHALIQHLKLI 1013
RAVV+ +E+K L+Q L +
Sbjct: 1095 -RAVVLGGEEKKARDLMQKLNTL 1116
Score = 787 (282.1 bits), Expect = 5.1e-164, Sum P(2) = 5.1e-164
Identities = 185/471 (39%), Positives = 264/471 (56%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQR 60
MEQQ ++AHRA + E K D PNPKAF F++ K ++ R+ + +++
Sbjct: 1 MEQQTNRAHRAPK-----------ERKKYDG--PNPKAFAFSNPGKGNKAGARSHDIKEK 47
Query: 61 RLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKR 120
RLH+P +DR E K+ LIK LI+ YTK + GP+TVV+ KKR
Sbjct: 48 RLHVPLVDRLPEEAPPLVVAVVGPPGVGKTTLIKSLIRRYTKQTLSTPNGPLTVVTSKKR 107
Query: 121 RLQFVECPND-INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLP-NVMGVLT 178
RL +ECP+D + MID AK AD+ LL+ID ++GFEMET EFLN++ G+P NV G+LT
Sbjct: 108 RLTILECPSDSLAAMIDVAKIADIVLLMIDGNYGFEMETMEFLNVLSTSGMPGNVFGILT 167
Query: 179 HLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKF 238
HL F +ELY+GAKLF LSG+I G+Y +++ NL+ F+SVMK
Sbjct: 168 HLDLFKKQSTLRAAKKRLKHRFWSELYNGAKLFYLSGVINGRYPDREVHNLSRFLSVMKN 227
Query: 239 -HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLK-KGTKVHIAGA 296
L WR SHPY L DRF D+TPP + + KCDR +A+YGYLRG N +G +VH+ G
Sbjct: 228 PRPLVWRNSHPYALADRFLDITPPTEIEKDPKCDRTIALYGYLRGTNFPAQGARVHVPGV 287
Query: 297 GDYSLAGVTGLADPCPLP----------SAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAV 346
GD +++G+ L DPCP P + K+ L +K+KL +APMS +G +L DKDAV
Sbjct: 288 GDLTVSGIEALPDPCPTPYMDQQIQKATGKSNKRRLGEKQKLLFAPMSDVGGVLVDKDAV 347
Query: 347 YIDIN-DHFVQFSEYQD----VGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDAT 401
YID+ +F + E +D +G LV LQ + + + S + LF +A
Sbjct: 348 YIDVKTSNFNEDDEERDTDRGLGEQLVIGLQGERKLLGEA--DSGVRLFRG-----GEAI 400
Query: 402 NNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
A D D+DT H ++ + + G E+ E ES + D ++ ++
Sbjct: 401 TKADDEDNDTGRKHRREVRFAGDDNQGAAEED--EGFESAEDGEDEEEEDQ 449
Score = 105 (42.0 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 532 YGDLKSS-KGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVE 590
Y +L+ + EE+ ES+R RFVT A + + D DD G FEDLET E
Sbjct: 613 YEELERKWRDEEMIESLRKRFVTAKLGDADDGED--EDVEDAFDEDDEGDGAFEDLETGE 670
Query: 591 KHQGHIKDNSGSNAIENEYESAVE----------RRLKKISLRKEIDEKDG 631
G IKD+ G + E++ + E +R +++ LR E ++++G
Sbjct: 671 VFNG-IKDDDGEASGEDDEKDGPEDLEAERARNAKRKEELKLRFEEEDREG 720
Score = 47 (21.6 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 506 VEGNKKLREVLDG--RLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRN 563
++G +KL D RLF E D + G + +R F D AA+ +
Sbjct: 377 LQGERKLLGEADSGVRLFRGGEA--ITKADDEDNDTGRKHRREVR--FAGDDNQGAAEED 432
Query: 564 QVSKGNSEGDDSDDAVSGDFE 584
+ + +G+D ++ D E
Sbjct: 433 EGFESAEDGEDEEEEDQDDME 453
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 838 (300.0 bits), Expect = 2.3e-158, Sum P(2) = 2.3e-158
Identities = 180/519 (34%), Positives = 302/519 (58%)
Query: 514 EVLDGRLFNMDECSKFNSYG-DLKSSKGE--EVYESIRDRFVTGDWSKAAQRNQVSKGNS 570
++L RL + + G ++K + + E+Y D T + + ++N+ +K
Sbjct: 649 KILKSRLLVAPKVTDETEEGKEIKENNDDDDELYGDFEDLEATENQDQEEEQNKSTK--- 705
Query: 571 EGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKD 630
+D DD D E+ EK + DN ++ E E KK L+ + +E++
Sbjct: 706 TAEDEDDFADFDAEE----EKEEEEDDDNVDEESMTTE-EKRQLNAAKKAKLKMQFEEEE 760
Query: 631 GAKFHCGQPNEIGLV--DKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIH 688
+F P + + K ++ + ++N + ++ R+++EG+R G+Y+++
Sbjct: 761 DREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIEGYRAGSYVKIVFD 820
Query: 689 DVPFEMVEYFDPCHPVLVGGIGLGEENVGYM-----------QVLKTRDPIILSIGWRRF 737
++P E ++ FDP +P+++GG+ E G M ++LK++DP+ILS+GWRRF
Sbjct: 821 NIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRWHKKILKSQDPLILSLGWRRF 880
Query: 738 QTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVA--IQNFSNNQASFRIT 795
QT+P+Y D +RMLKYTPEH +C A F+GPL P T V I + + +FR+
Sbjct: 881 QTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFNIVDSKSTTGAFRVA 940
Query: 796 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRG 855
A+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+ EG ++RTVSGIRG
Sbjct: 941 ASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFEGAQIRTVSGIRG 1000
Query: 856 QVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTA 915
++K+A ++P +G R TFED+ILMSD +F++ W V++ +FYNP+T+
Sbjct: 1001 EIKRAL-----SKP--------DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNPVTSL 1047
Query: 916 MQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFES 975
+ + W+GM+ ++R + N++ P+N DS YK + R R+FNPL +PKS+QA LPF+S
Sbjct: 1048 LLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAELPFKS 1107
Query: 976 KPKDI-PSRKRLFLENSRAVVMEPQERKVHALIQHLKLI 1013
+ + P +K+ ++ + RAVV+ +E+K L+Q + I
Sbjct: 1108 QIHTMKPQKKKTYM-SKRAVVLGGEEKKARDLMQKINSI 1145
Score = 733 (263.1 bits), Expect = 2.3e-158, Sum P(2) = 2.3e-158
Identities = 204/620 (32%), Positives = 307/620 (49%)
Query: 2 EQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRR 61
+QQ +KAHR G + K +K +++ QD + N KAF ++ K +R R+ + +++
Sbjct: 4 QQQSNKAHR----GGTKKPGAKKKLH-QDGQ--NKKAFAVSAPRKLERMARRSHDVNEKK 56
Query: 62 LHIPTIDRSYGEXXXXXXXXXXXX-XXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKR 120
LH+P +DR+ + KS LIK LI+ TK + E+ GP+TVVSGK+R
Sbjct: 57 LHVPMVDRTPDDDPPPVIIAVVGPPGTGKSTLIKSLIRRLTKTTLTEINGPITVVSGKRR 116
Query: 121 RLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
RL F+E ND+N MID AK ADL LLLID ++G EMET EFLN+ Q+HG+P V+GV THL
Sbjct: 117 RLTFIEVNNDLNSMIDIAKVADLVLLLIDGNYGLEMETMEFLNIAQHHGMPRVLGVATHL 176
Query: 181 XXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS 240
F TE+Y GAKLF LSG+I G+Y ++I NL+ FISVMKF
Sbjct: 177 DLFKSQSTLRTSKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRP 236
Query: 241 LSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLK-KGTKVHIAGAGDY 299
L WR HPY+L DR D+T P+++ N+KCDR VAIYGYL G L + +HIAG GD+
Sbjct: 237 LKWRNEHPYLLADRITDLTHPQKIAENSKCDRKVAIYGYLHGTPLPVENAHIHIAGVGDH 296
Query: 300 SLAGVTGLADPCPLP---------------SAA-----------KKKGLRDKEKLFYAPM 333
+ V L DPCP P +AA ++K L DK+K+ YAPM
Sbjct: 297 YVHSVEKLPDPCPTPYYEQKLEELERERVKNAAASGEPLAKTTRRRKRLEDKQKIIYAPM 356
Query: 334 SGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPID-KKLEKSIISLFSQ 392
S +G +L DKDAVYID+ + + G + +K + K D +++ +++
Sbjct: 357 SDVGGVLVDKDAVYIDVGGKEIYKT---GTGTSELKG-EGEKLVNDLQEISQTMTERLED 412
Query: 393 KPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
P + +++ A + D+ + + + + GL +++E E++ D +
Sbjct: 413 GPGLQLFSSSKALNQVDEDD---NNEEEDDDDDEEGL----LSDE-ETI---VDTGRSSL 461
Query: 453 FSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKL 512
A + KS + +L + E + N K
Sbjct: 462 RKARVYGKSVSEDDEFDELESDEEQDGDQFSDDEDKAENNLKSRG---MVEVDFGSNNKY 518
Query: 513 REVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGD--WSKAAQRNQVSK--- 567
+E L +++ S +S D ++ S+R ++ + K +V K
Sbjct: 519 KE---NDLEYVED-SSLSSDEDYYKKSAAKLTASVRRKWDINKLIYLKDIDAKEVIKKWR 574
Query: 568 GNSEGDDSDDAVSGDFEDLE 587
N DD DD + ED+E
Sbjct: 575 NNDVQDDDDDDDEEEEEDIE 594
Score = 42 (19.8 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 573 DDSDDAVSG--DFEDLETVEK--HQGHIKDNSGSNAIENEYESAVERRL--KKISLR--- 623
DD +D + F LE ++ + I +N+ + EN Y+ R L K++
Sbjct: 608 DDKEDLDTSLPRFPTLEVLKAKFNPNTIDENNSDDEYENGYKILKSRLLVAPKVTDETEE 667
Query: 624 -KEIDEK--DGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELE 675
KEI E D + + G ++ + +E E K AE D D+ + E
Sbjct: 668 GKEIKENNDDDDELY-GDFEDLEATENQDQEEEQNKSTKTAE--DEDDFADFDAE 719
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 838 (300.0 bits), Expect = 2.3e-158, Sum P(2) = 2.3e-158
Identities = 180/519 (34%), Positives = 302/519 (58%)
Query: 514 EVLDGRLFNMDECSKFNSYG-DLKSSKGE--EVYESIRDRFVTGDWSKAAQRNQVSKGNS 570
++L RL + + G ++K + + E+Y D T + + ++N+ +K
Sbjct: 649 KILKSRLLVAPKVTDETEEGKEIKENNDDDDELYGDFEDLEATENQDQEEEQNKSTK--- 705
Query: 571 EGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKD 630
+D DD D E+ EK + DN ++ E E KK L+ + +E++
Sbjct: 706 TAEDEDDFADFDAEE----EKEEEEDDDNVDEESMTTE-EKRQLNAAKKAKLKMQFEEEE 760
Query: 631 GAKFHCGQPNEIGLV--DKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIH 688
+F P + + K ++ + ++N + ++ R+++EG+R G+Y+++
Sbjct: 761 DREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIEGYRAGSYVKIVFD 820
Query: 689 DVPFEMVEYFDPCHPVLVGGIGLGEENVGYM-----------QVLKTRDPIILSIGWRRF 737
++P E ++ FDP +P+++GG+ E G M ++LK++DP+ILS+GWRRF
Sbjct: 821 NIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRWHKKILKSQDPLILSLGWRRF 880
Query: 738 QTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVA--IQNFSNNQASFRIT 795
QT+P+Y D +RMLKYTPEH +C A F+GPL P T V I + + +FR+
Sbjct: 881 QTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFNIVDSKSTTGAFRVA 940
Query: 796 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRG 855
A+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+ EG ++RTVSGIRG
Sbjct: 941 ASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFEGAQIRTVSGIRG 1000
Query: 856 QVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTA 915
++K+A ++P +G R TFED+ILMSD +F++ W V++ +FYNP+T+
Sbjct: 1001 EIKRAL-----SKP--------DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNPVTSL 1047
Query: 916 MQPRDKIWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFES 975
+ + W+GM+ ++R + N++ P+N DS YK + R R+FNPL +PKS+QA LPF+S
Sbjct: 1048 LLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAELPFKS 1107
Query: 976 KPKDI-PSRKRLFLENSRAVVMEPQERKVHALIQHLKLI 1013
+ + P +K+ ++ + RAVV+ +E+K L+Q + I
Sbjct: 1108 QIHTMKPQKKKTYM-SKRAVVLGGEEKKARDLMQKINSI 1145
Score = 733 (263.1 bits), Expect = 2.3e-158, Sum P(2) = 2.3e-158
Identities = 204/620 (32%), Positives = 307/620 (49%)
Query: 2 EQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRR 61
+QQ +KAHR G + K +K +++ QD + N KAF ++ K +R R+ + +++
Sbjct: 4 QQQSNKAHR----GGTKKPGAKKKLH-QDGQ--NKKAFAVSAPRKLERMARRSHDVNEKK 56
Query: 62 LHIPTIDRSYGEXXXXXXXXXXXX-XXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKR 120
LH+P +DR+ + KS LIK LI+ TK + E+ GP+TVVSGK+R
Sbjct: 57 LHVPMVDRTPDDDPPPVIIAVVGPPGTGKSTLIKSLIRRLTKTTLTEINGPITVVSGKRR 116
Query: 121 RLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
RL F+E ND+N MID AK ADL LLLID ++G EMET EFLN+ Q+HG+P V+GV THL
Sbjct: 117 RLTFIEVNNDLNSMIDIAKVADLVLLLIDGNYGLEMETMEFLNIAQHHGMPRVLGVATHL 176
Query: 181 XXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS 240
F TE+Y GAKLF LSG+I G+Y ++I NL+ FISVMKF
Sbjct: 177 DLFKSQSTLRTSKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRP 236
Query: 241 LSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLK-KGTKVHIAGAGDY 299
L WR HPY+L DR D+T P+++ N+KCDR VAIYGYL G L + +HIAG GD+
Sbjct: 237 LKWRNEHPYLLADRITDLTHPQKIAENSKCDRKVAIYGYLHGTPLPVENAHIHIAGVGDH 296
Query: 300 SLAGVTGLADPCPLP---------------SAA-----------KKKGLRDKEKLFYAPM 333
+ V L DPCP P +AA ++K L DK+K+ YAPM
Sbjct: 297 YVHSVEKLPDPCPTPYYEQKLEELERERVKNAAASGEPLAKTTRRRKRLEDKQKIIYAPM 356
Query: 334 SGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPID-KKLEKSIISLFSQ 392
S +G +L DKDAVYID+ + + G + +K + K D +++ +++
Sbjct: 357 SDVGGVLVDKDAVYIDVGGKEIYKT---GTGTSELKG-EGEKLVNDLQEISQTMTERLED 412
Query: 393 KPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
P + +++ A + D+ + + + + GL +++E E++ D +
Sbjct: 413 GPGLQLFSSSKALNQVDEDD---NNEEEDDDDDEEGL----LSDE-ETI---VDTGRSSL 461
Query: 453 FSALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKL 512
A + KS + +L + E + N K
Sbjct: 462 RKARVYGKSVSEDDEFDELESDEEQDGDQFSDDEDKAENNLKSRG---MVEVDFGSNNKY 518
Query: 513 REVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRFVTGD--WSKAAQRNQVSK--- 567
+E L +++ S +S D ++ S+R ++ + K +V K
Sbjct: 519 KE---NDLEYVED-SSLSSDEDYYKKSAAKLTASVRRKWDINKLIYLKDIDAKEVIKKWR 574
Query: 568 GNSEGDDSDDAVSGDFEDLE 587
N DD DD + ED+E
Sbjct: 575 NNDVQDDDDDDDEEEEEDIE 594
Score = 42 (19.8 bits), Expect = 2.2e-73, Sum P(2) = 2.2e-73
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 573 DDSDDAVSG--DFEDLETVEK--HQGHIKDNSGSNAIENEYESAVERRL--KKISLR--- 623
DD +D + F LE ++ + I +N+ + EN Y+ R L K++
Sbjct: 608 DDKEDLDTSLPRFPTLEVLKAKFNPNTIDENNSDDEYENGYKILKSRLLVAPKVTDETEE 667
Query: 624 -KEIDEK--DGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELE 675
KEI E D + + G ++ + +E E K AE D D+ + E
Sbjct: 668 GKEIKENNDDDDELY-GDFEDLEATENQDQEEEQNKSTKTAE--DEDDFADFDAE 719
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 770 (276.1 bits), Expect = 7.9e-149, Sum P(2) = 7.9e-149
Identities = 183/490 (37%), Positives = 274/490 (55%)
Query: 540 GEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDN 599
GEE+Y D G+ S+ A+ N S SE +D ++ +GD +D KD
Sbjct: 655 GEELYGDFED-LEDGNPSEQAEDN--SDKESEDEDENEDTNGD-DDNSFTNFDAEEKKDL 710
Query: 600 SGSNAIENEYESAVERRLKKISLRKEIDEKDGAKF-HCGQPNEIGL-VDKMKEEIEFRKQ 657
+ E E +A KK LR + + ++G F + NE + K +I + +
Sbjct: 711 TMEQ--EREMNAA-----KKEKLRAQFEIEEGENFKEDDENNEYDTWYELQKAKISKQLE 763
Query: 658 MNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVG 717
+N E ++ R +EGF+ G+Y+R+ VP E V+ F+P P+++GG+ E G
Sbjct: 764 INNIEYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNPKFPIVMGGLLPTEIKFG 823
Query: 718 -----------YMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLA 766
+ ++LKT DP++LS+GWRRFQT+P+Y D RMLKYTPEH +C A
Sbjct: 824 IVKARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNA 883
Query: 767 MFWGPLAPPQTGVVAIQNFSNNQAS--FRITATAVVLEFNHEVKIKKKIKLVGYPCKIFK 824
F+GPL P T +Q +N+ FRI AT +V E + ++I KK+KLVG+P KIFK
Sbjct: 884 AFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFK 943
Query: 825 KTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCT 884
TA IKDMF+S +EVA+ EG +++TVSGIRG++K+A ++P EG R
Sbjct: 944 NTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRAL-----SKP--------EGHYRAA 990
Query: 885 FEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIPVNK 944
FED+ILMSD+V +R W V + +FYNP+T+ + W+G++ ++R NL P N
Sbjct: 991 FEDKILMSDIVILRSWYPVRVKKFYNPVTSLLLKEKTEWKGLRLTGQIRAAMNLETPSNP 1050
Query: 945 DSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDI-PSRKRLFLENSRAVVMEPQERKV 1003
DS Y I R R FN L +PK++Q LPF+S+ + P +K+ ++ RAVV+ E+K
Sbjct: 1051 DSAYHKIERVERHFNGLKVPKAVQKELPFKSQIHQMKPQKKKTYMAK-RAVVLGGDEKKA 1109
Query: 1004 HALIQHLKLI 1013
+ IQ + I
Sbjct: 1110 RSFIQKVLTI 1119
Score = 716 (257.1 bits), Expect = 7.9e-149, Sum P(2) = 7.9e-149
Identities = 184/483 (38%), Positives = 260/483 (53%)
Query: 3 QQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
+Q +K HR + ++AKK +++ Q N KAF A+ K R+M R+++ +R+L
Sbjct: 2 EQSNKQHRKAKEKNTAKK----KLHTQGH---NAKAFAVAAPGKMARTMQRSSDVNERKL 54
Query: 63 HIPTIDRS-YGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRR 121
H+P +DR+ + K+ LI+ L++ TK + +++GP+TVVSGK RR
Sbjct: 55 HVPMVDRTPEDDPPPFIVAVVGPPGTGKTTLIRSLVRRMTKSTLNDIQGPITVVSGKHRR 114
Query: 122 LQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
L F+ECP +D+N MID AK ADL LLLID + GFEMET EFLN+ Q+HG+P V+GV THL
Sbjct: 115 LTFLECPADDLNAMIDIAKIADLVLLLIDGNFGFEMETMEFLNIAQHHGMPRVLGVATHL 174
Query: 181 XXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS 240
F TE+Y GAKLF LSG+I G+Y ++I NL+ FISVMKF
Sbjct: 175 DLFKSQSTLRASKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRP 234
Query: 241 LSWRTSHPYILVDRFEDVTPPERVHVNN-KCDRNVAIYGYLRGCNLKK--GTKVHIAGAG 297
L WR HPY+L DRF D+T PE + + DR VAIYGYL G L GT+VHIAG G
Sbjct: 235 LKWRNEHPYMLADRFTDLTHPELIETQGLQIDRKVAIYGYLHGTPLPSAPGTRVHIAGVG 294
Query: 298 DYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFY-APMSG-LGDLLYDKDAVYIDINDHFV 355
D+S+A + L DPCP P +K ++EK+ A +G + + +D D +
Sbjct: 295 DFSVAQIEKLPDPCPTPFYQQKLDDFEREKMKEEAKANGEITTASTTRRRKRLDDKDKLI 354
Query: 356 QFSEYQDVGVTLVKSLQNTKY-PIDKKLEK-SIISLFSQKPNVLSDATNNAKDMDDD-TE 412
++ DVG L+ ++ Y I KK E+ S + Q+ + ++ E
Sbjct: 355 -YAPMSDVGGVLMD--KDAVYIDIGKKNEEPSFVP--GQERGEGEKLMTGLQSVEQSIAE 409
Query: 413 YIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFKKSFGQCTNLIQLV 472
G Q SNG VA+ HE DV+ GE+ KS G+ + +
Sbjct: 410 KFDGVGLQL---FSNGTELHEVAD-----HEGMDVESGEESIEDDEGKSKGRTSLRKPRI 461
Query: 473 YGK 475
YGK
Sbjct: 462 YGK 464
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 253/659 (38%), Positives = 371/659 (56%)
Query: 390 FSQKPNVLSDATNNAKDMDDDTEYIHGKQY--------QTREGTSNGLGEKHVAEEMESL 441
F+ + ++ N ++ D + E + K++ R G+ N +GE E++ L
Sbjct: 593 FASEDETEESSSLNTEEEDSENEEVIRKKFPKSSQVADDQRLGSENLIGETSDVEDL--L 650
Query: 442 HEDADVKKGEKFS-----ALAFKKSFGQCTNLIQLVYGKSTPTS-----ATLSKEVQXXX 491
E+ D K+ +S AL +K+ + L ++TP T++++ +
Sbjct: 651 KEEEDYKEENDYSTETSGALKWKEDLSRKAAEAFLRQQQATPNLRKLIYGTVTEDNEEAD 710
Query: 492 XXXXXXXXXFFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRF 551
FR + +++ + LD ++D CS+F+ EEV SIRD F
Sbjct: 711 GDTREELGGLFRVS-QPSRECKHKLD----SLD-CSRFHVEAPHDWDL-EEVMNSIRDCF 763
Query: 552 VTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYES 611
VTG W + +K +E D+ + GDFEDLET + H+G ++ +E +
Sbjct: 764 VTGKWE---EDKDAAKILAE----DEELYGDFEDLETGDVHKGKSDPDTQIEDVEEVNKE 816
Query: 612 AVERRLKKISLRKEIDEKDGAK--FHCG-QPNEIGLVDKMKEEIEFRKQMNIAELNDLDE 668
++ ++ + +K +D+K K F E D +K E+ + Q+N AE D D+
Sbjct: 817 EIDPSTEESARKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMHKQAQLNRAEFEDQDD 876
Query: 669 VTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-------- 720
R++ EGFR G Y+R+ I +VP E V FDP +P+++GG+G E NVGY+Q
Sbjct: 877 EARVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRW 936
Query: 721 ---VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQT 777
+LK+RDPII S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FWGP+ P T
Sbjct: 937 YKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGT 996
Query: 778 GVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDL 837
G +A+Q+ S+ FRI AT V+L+ + +KI KK+KL G+P KIFK T+ IK MF S L
Sbjct: 997 GFLAVQSVSDIMPDFRIAATGVILDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSAL 1056
Query: 838 EVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
EVA+ EG +RTVSGIRGQ+KKA + P EG R +FED++LMSD+VFM
Sbjct: 1057 EVAKFEGAVIRTVSGIRGQIKKALRA------------P-EGAFRASFEDKLLMSDIVFM 1103
Query: 898 RGWADVEIPRFYNPLTTAMQP-RDK-IWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRP 955
R W V IP FYNP+T+ ++P +K W GM+T +LR H + + NKDSLYK I R+
Sbjct: 1104 RTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVKLKPNKDSLYKPIVRQK 1163
Query: 956 RKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
+ FN L IPK+LQ ALPF++KPK ++ + R AV+ EP ERK+ AL+ L +
Sbjct: 1164 KHFNSLHIPKALQKALPFKNKPKTQAKAGKIPKDRRRPAVIREPHERKILALLDALSTV 1222
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 248/678 (36%), Positives = 374/678 (55%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME + K HR + SG A+K K + +++D +K NPKAF S+V+ RS RT
Sbjct: 1 METKDQKKHRKKHSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT 60
Query: 55 AEKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTV 114
+ + ++ HIP +DR+ E KS LI+CLI+++T+ K+ E+RGPVT+
Sbjct: 61 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI 120
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +M
Sbjct: 121 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM 180
Query: 175 GVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
G+LTHL F TE+Y GAKLF LSG++ G+Y ++I NL FI+
Sbjct: 181 GILTHLDSFKYNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT 240
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG +LK +++H+
Sbjct: 241 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP 300
Query: 295 GAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHF 354
G GD++++ V+ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 GVGDFAVSDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH 360
Query: 355 VQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNAKDMDDDT 411
F E +V T LV+SL +T ID K+ S ++LFS KP D N + M +
Sbjct: 361 -GFQELDEVRPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGQWMPKEE 419
Query: 412 EYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFS-ALAFKKSFGQC-TNLI 469
+ + K + R G E + + +D ++ +G+K + + ++ + T ++
Sbjct: 420 KQVDLKTGRVRRKAIFGDEEDESGDSNDE--DDEEMSEGDKLDDSCSDDETEDEADTEMM 477
Query: 470 QLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLREVLDGRLFNMDECSKF 529
++Y + +E++ F + ++ E +G DE S
Sbjct: 478 DMMYAREKGVKRQRLQEMEEDLEADLPA----FADSDDDLERSSED-EGEAEEADESS-- 530
Query: 530 NSYGDLKSSKGEEVYESIRDRFVTGDWSKAA--QRNQVSKG-NSEGDDSDDAVSGDFEDL 586
+ + S EE I + V GD+SKA Q N +SK N E + + + D
Sbjct: 531 ----EEEDSPAEE--RDISESKVVGDYSKAGLLQTNGLSKSLNLESSLTVNKATLTISDS 584
Query: 587 E--TVEK---HQGHIKDNSGSNAIE--NEYESAVERRLKKISLRKEIDEKDGAKFHCGQP 639
T E+ + +++S N E +E E + ++ K S + D++ G++ G+
Sbjct: 585 GHCTAEEAFASEDETEESSSLNTEEEDSENEEVIRKKFPKSSQVAD-DQRLGSENLIGET 643
Query: 640 NEIGLVDKMKEEIEFRKQ 657
+++ D +KEE +++++
Sbjct: 644 SDVE--DLLKEEEDYKEE 659
>UNIPROTKB|I3LND5 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000026474 OMA:HEESDHE Uniprot:I3LND5
Length = 763
Score = 958 (342.3 bits), Expect = 1.3e-103, Sum P(3) = 1.3e-103
Identities = 210/456 (46%), Positives = 277/456 (60%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMR- 53
ME + K HR + SG A+K K + +++D +K NPKAF S+V+ RS R
Sbjct: 1 METKDQKKHRKKNSGPKAEKKKKRHLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRN 60
Query: 54 -TAEKEQRRLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPV 112
T + + ++ HIP +DR+ E KS LI+CLI+++T+ K+ E+RGPV
Sbjct: 61 RTQDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPV 120
Query: 113 TVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPN 172
T+VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P
Sbjct: 121 TIVSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPK 180
Query: 173 VMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF 232
+MGVLTHL F TE+Y GAKLF LSG++ G+Y ++I NL F
Sbjct: 181 IMGVLTHLDSFKYNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRF 240
Query: 233 ISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVH 292
I+VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG +LK +++H
Sbjct: 241 ITVMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIH 300
Query: 293 IAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDIND 352
I G GD++++ V+ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 IPGVGDFAVSDVSFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGG 360
Query: 353 HFVQFSEYQDVGVT--LVKSLQNTKYPIDKKLEKSIISLFSQ-KPNVLSDATNNA----- 404
F E ++V T LV+SL +T ID K+ S ++LFS KP D N
Sbjct: 361 SH-GFQESEEVRPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGVWMPK 419
Query: 405 --KDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEM 438
K MD T + K E +G + EEM
Sbjct: 420 EEKQMDLKTGRVRRKAIFGDEEDESGDSDDEDDEEM 455
Score = 58 (25.5 bits), Expect = 1.3e-103, Sum P(3) = 1.3e-103
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 406 DMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
D DDD E ++ + E + E AEE E + E V+KG K
Sbjct: 508 DSDDDLERSSVEE-EAEEADESSEEEDSTAEEEEDILESKAVRKGSK 553
Score = 52 (23.4 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 572 GDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERR-------LKKISLRK 624
GD+ D+ SGD +D + E + +NS S+ E E ++ + + +K+ L
Sbjct: 438 GDEEDE--SGDSDDEDDEEMSESDKLENSSSDDEEEEEDAEMTDKQYVPGKGIKRQKLEM 495
Query: 625 EID-EKDGAKFHCGQPN-EIGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGT 681
E D E D F + E V++ EE + + + + +++ LE + R G+
Sbjct: 496 EEDIEVDLPAFADSDDDLERSSVEEEAEEADESSEEEDSTAEEEEDI--LESKAVRKGS 552
Score = 44 (20.5 bits), Expect = 1.3e-103, Sum P(3) = 1.3e-103
Identities = 23/104 (22%), Positives = 49/104 (47%)
Query: 524 DECSKFNSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDF 583
DE + +S + S+ EEV IR +F + +QV G G ++ + D
Sbjct: 597 DESEENSSLSREEDSENEEV---IRKKF--------PKPSQVVSGQKLGSENLVDETSDI 645
Query: 584 EDLETVEKHQGHIKDNSGSNAIEN--EYESAVERRLKKISLRKE 625
EDL +++ + + ++N+ S +++ + R+ + LR++
Sbjct: 646 EDL--LKEEEDYKEENNYSTETSGALKWKEDLSRKAAEAFLRQQ 687
Score = 43 (20.2 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
Identities = 29/111 (26%), Positives = 47/111 (42%)
Query: 523 MDECSKF-NSYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGD-----DSD 576
M E K NS D + EE E ++V G K Q+ ++ + + E D DSD
Sbjct: 455 MSESDKLENSSSD--DEEEEEDAEMTDKQYVPGKGIKR-QKLEMEE-DIEVDLPAFADSD 510
Query: 577 DAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEID 627
D + + E E + +++S + E+ ES R+ K L + D
Sbjct: 511 DDLERSSVEEEAEEADESSEEEDSTAEEEEDILESKAVRKGSKPGLLETND 561
Score = 41 (19.5 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 542 EVYESIR-DRFVTGDWSKAAQRNQVSKGNSEGDDS---DDAVSGDFEDL---ETVEKHQ- 593
E+ E I D D +R+ V + E D+S +D+ + + ED+ + V K
Sbjct: 494 EMEEDIEVDLPAFADSDDDLERSSVEEEAEEADESSEEEDSTAEEEEDILESKAVRKGSK 553
Query: 594 -GHIKDNSGSNAIENEYESAVER 615
G ++ N SN + E V++
Sbjct: 554 PGLLETNDLSNRLNLEKSLTVKK 576
>GENEDB_PFALCIPARUM|PFA0330w [details] [associations]
symbol:AARP2 "pfAARP2 protein" species:5833
"Plasmodium falciparum" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 423 (154.0 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 120/391 (30%), Positives = 206/391 (52%)
Query: 538 SKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDD---SDDAVSGDFEDLETVEKHQG 594
S+ ++VY G+ ++ + + NS+ D+ SDD S ++ + +
Sbjct: 914 SRYDKVYRMFFKNRKRGNMGINSEGDDNNNNNSDDDNNINSDDNNSNSDDNNSNSDDNNS 973
Query: 595 HIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEF 654
+ DN+ SN+ +N S I+ + + KD K + G NEI + + +K+ ++
Sbjct: 974 NSDDNN-SNSDDNNINSDDNN----INSGDDNNLKDKDKGNIG--NEINIKENLKK-LKE 1025
Query: 655 RKQMNIAELNDLDEVTRLELEGFRT----GTYLRLGIHDVPFEMVEYFDPCHPVLVGGIG 710
K + + + +++ L G+ + G Y+R+ ++ ++ + + ++ GGI
Sbjct: 1026 EKLIEKEKFRETEKIGVLN-SGYGSSVNIGEYVRIELNIEKKKLAILKN--NLIICGGIQ 1082
Query: 711 LGEENVG-----------YMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWH-RMLKYT 758
EE + ++L++ DP+I S+GWRR+Q+IP+Y+I +RN R LKYT
Sbjct: 1083 TYEEKDSLIHCRIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYT 1142
Query: 759 PEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGY 818
EHMHC F+GPLA +G++A+ N+ +RI +++E N+ + I KK+KL+G
Sbjct: 1143 TEHMHCNCTFYGPLASVNSGILALYNYKK-VPFYRICINGLIIETNNNLNIMKKLKLIGE 1201
Query: 819 PCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPRE 878
P KIFK TA +K+MF SDLEV + V T SGI+G +K +I N
Sbjct: 1202 PYKIFKNTAFVKNMFNSDLEVCKFLNCPVVTPSGIKGLIKN----KINNN---------- 1247
Query: 879 GIARCTFEDRILMSDVVFMRGWADVEIPRFY 909
G RCTF D+I MSD+V ++ + +V+I +FY
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFY 1278
Score = 421 (153.3 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 7 KAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVK-AKRSMMRTAEKEQRRLHIP 65
K H+ ++ G KK K +INK K KAF F+ +K A R E E+++L +
Sbjct: 6 KHHKKKKVG---KKSKKKKINKNGNNKKYHKAFAFSGGIKSAHRRKQHLFELEEKKLRVQ 62
Query: 66 TIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFV 125
+ + + KS L+K LIK+Y + + ++GP+++ + +R F+
Sbjct: 63 KVYKEGNKSSPLIVVIQGAKGVGKSTLLKSLIKYYVGITINNIKGPISIFTKNLKRYTFI 122
Query: 126 ECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLXXXXX 185
E +DI MID AK AD+ +L+ID S+G E+ET EFLN++ HGLP V+GV+THL
Sbjct: 123 EVNDDILHMIDVAKIADICILVIDGSYGIELETLEFLNILYTHGLPKVLGVVTHLDKFKD 182
Query: 186 XXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRT 245
+ EL G+KLF LSG+ +Y K +I NL +F+SV+K +SWR
Sbjct: 183 SKSIRKRKKKLNKRYSEELVEGSKLFFLSGIQNNRYNKTEIRNLCKFLSVIKKPIISWRE 242
Query: 246 SHPYIL 251
H YIL
Sbjct: 243 QHGYIL 248
Score = 125 (49.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 879 GIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNL 938
G RCTF D+I MSD+V ++ + +V+I +FY +KI K+I ELR +N
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-----FDIENKI----KSINELRYLYN- 1297
Query: 939 SIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPK 978
I VN ++ Y++I R + I L LPF+SKPK
Sbjct: 1298 -IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLPFKSKPK 1336
Score = 125 (49.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 42/143 (29%), Positives = 65/143 (45%)
Query: 270 CDRNV--AIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEK 327
CD + +I GY+ G + K KVHI GD + + L +P L K +
Sbjct: 307 CDEKIKISIEGYVYGSKIYKNQKVHIPNIGDVEIDNIQILQEPFKLDEQKKNPNI----- 361
Query: 328 LFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSII 387
YAPMS +G+L +D D +YI I + V F+ + + L + T P D EK+
Sbjct: 362 --YAPMSDVGNLTFDFDNMYIHIPKNKVNFTREEFL---LADQREET-IPGDHSGEKNGN 415
Query: 388 SLFSQKPNVLSDATNNAKDMDDD 410
+L + D ++ D+ DD
Sbjct: 416 TLKDDEGG--GDGDDDDDDVGDD 436
Score = 59 (25.8 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 548 RDRFVTGDWSKAAQRNQVS--KGNSEGDDSDDAVSGD-FEDLETVEKHQG--HIKDNSGS 602
R+ + GD S N + +G +GDD DD V D +D + + G ++ D+ G+
Sbjct: 400 REETIPGDHSGEKNGNTLKDDEGGGDGDDDDDDVGDDNVDDGDDDDDDVGDDNVDDDDGN 459
Query: 603 N 603
+
Sbjct: 460 D 460
Score = 58 (25.5 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 39/198 (19%), Positives = 78/198 (39%)
Query: 398 SDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHE----DADVKKGEKF 453
+D +N D DDD E + ++ N EK++ + ++ + E + K +K
Sbjct: 476 NDDDDNDDDDDDDNENSDKSSHHNKQSNDN---EKYITDSIKMIRELQKSNGVFSKQQKD 532
Query: 454 SALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLR 513
+ + F ++ N + K+ P++ +S++ + + K E KL
Sbjct: 533 NLILFNET--NDNNGASNIRRKA-PSNVYISEKQKKKKQQDS-----YVNEKAEEYNKLE 584
Query: 514 EVLDGRLFNMDE--CSKFN---SYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKG 568
+L + N +E C+ N S D K E R + D S N ++
Sbjct: 585 SILYEKKNNDEEYYCAN-NVTISSDDDKEENDASFREFYRKYGLNADMSDDGGNNDINIY 643
Query: 569 NSEGDDSDDAVSGDFEDL 586
N G +S++ + ++ L
Sbjct: 644 N--GQESEEKLKDTYDKL 659
Score = 51 (23.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 24/112 (21%), Positives = 51/112 (45%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSG--SNAI----ENEYESAVERRLKK--I 620
+++ DD+DD D E+ + H DN +++I E + + V + +K +
Sbjct: 475 DNDDDDNDDDDDDDNENSDKSSHHNKQSNDNEKYITDSIKMIRELQKSNGVFSKQQKDNL 534
Query: 621 SLRKEIDEKDGAK-FHCGQPNEIGLVDKMKEEIEFRKQMN--IAELNDLDEV 669
L E ++ +GA P+ + + +K K++ + +N E N L+ +
Sbjct: 535 ILFNETNDNNGASNIRRKAPSNVYISEKQKKKKQQDSYVNEKAEEYNKLESI 586
Score = 51 (23.0 bits), Expect = 6.7e-51, Sum P(5) = 6.7e-51
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 568 GNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSN--AIENEYESAVERRLK-KISLRK 624
GN + DD +D D +D + + DN S+ + N+ + E+ + I + +
Sbjct: 458 GNDDDDDDNDDDDNDDDDNDDDDNDDDDDDDNENSDKSSHHNKQSNDNEKYITDSIKMIR 517
Query: 625 EIDEKDG 631
E+ + +G
Sbjct: 518 ELQKSNG 524
Score = 48 (22.0 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 505 KVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRF---VTGDWSKAAQ 561
K E + RE N D S D+ G+E E ++D + + G +
Sbjct: 611 KEENDASFREFYRKYGLNAD-MSDDGGNNDINIYNGQESEEKLKDTYDKLIDGGHDE--- 666
Query: 562 RNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSN 603
+ + GD++DD D ++ + E++ D+ N
Sbjct: 667 -DDYDDDENVGDENDDDEENDDDENDDDEENDDDENDDDEEN 707
Score = 40 (19.1 bits), Expect = 8.0e-52, Sum P(5) = 8.0e-52
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLK 618
+ E DD D+ V D E+ + E ++ D + + +++Y + + LK
Sbjct: 723 DDENDDDDENVGDDDENDDDDE----NVGDENIDDDDDDDYNNYNNKELK 768
Score = 39 (18.8 bits), Expect = 7.2e-42, Sum P(3) = 7.2e-42
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 646 DKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGT--YLRLGIHDVP 691
D +E +K N L + DE ++ +EG+ G+ Y +H +P
Sbjct: 289 DNDNDEENEKKLTNF--LTNCDEKIKISIEGYVYGSKIYKNQKVH-IP 333
Score = 38 (18.4 bits), Expect = 1.3e-51, Sum P(5) = 1.3e-51
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 644 LVDKMKEEIEFRKQMNIAELNDLDE 668
L+D +E ++ N+ + ND DE
Sbjct: 659 LIDGGHDEDDYDDDENVGDENDDDE 683
>UNIPROTKB|Q8I275 [details] [associations]
symbol:AARP2 "PfAARP2 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 423 (154.0 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 120/391 (30%), Positives = 206/391 (52%)
Query: 538 SKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDD---SDDAVSGDFEDLETVEKHQG 594
S+ ++VY G+ ++ + + NS+ D+ SDD S ++ + +
Sbjct: 914 SRYDKVYRMFFKNRKRGNMGINSEGDDNNNNNSDDDNNINSDDNNSNSDDNNSNSDDNNS 973
Query: 595 HIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEEIEF 654
+ DN+ SN+ +N S I+ + + KD K + G NEI + + +K+ ++
Sbjct: 974 NSDDNN-SNSDDNNINSDDNN----INSGDDNNLKDKDKGNIG--NEINIKENLKK-LKE 1025
Query: 655 RKQMNIAELNDLDEVTRLELEGFRT----GTYLRLGIHDVPFEMVEYFDPCHPVLVGGIG 710
K + + + +++ L G+ + G Y+R+ ++ ++ + + ++ GGI
Sbjct: 1026 EKLIEKEKFRETEKIGVLN-SGYGSSVNIGEYVRIELNIEKKKLAILKN--NLIICGGIQ 1082
Query: 711 LGEENVG-----------YMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWH-RMLKYT 758
EE + ++L++ DP+I S+GWRR+Q+IP+Y+I +RN R LKYT
Sbjct: 1083 TYEEKDSLIHCRIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYT 1142
Query: 759 PEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGY 818
EHMHC F+GPLA +G++A+ N+ +RI +++E N+ + I KK+KL+G
Sbjct: 1143 TEHMHCNCTFYGPLASVNSGILALYNYKK-VPFYRICINGLIIETNNNLNIMKKLKLIGE 1201
Query: 819 PCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPRE 878
P KIFK TA +K+MF SDLEV + V T SGI+G +K +I N
Sbjct: 1202 PYKIFKNTAFVKNMFNSDLEVCKFLNCPVVTPSGIKGLIKN----KINNN---------- 1247
Query: 879 GIARCTFEDRILMSDVVFMRGWADVEIPRFY 909
G RCTF D+I MSD+V ++ + +V+I +FY
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFY 1278
Score = 421 (153.3 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 7 KAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVK-AKRSMMRTAEKEQRRLHIP 65
K H+ ++ G KK K +INK K KAF F+ +K A R E E+++L +
Sbjct: 6 KHHKKKKVG---KKSKKKKINKNGNNKKYHKAFAFSGGIKSAHRRKQHLFELEEKKLRVQ 62
Query: 66 TIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFV 125
+ + + KS L+K LIK+Y + + ++GP+++ + +R F+
Sbjct: 63 KVYKEGNKSSPLIVVIQGAKGVGKSTLLKSLIKYYVGITINNIKGPISIFTKNLKRYTFI 122
Query: 126 ECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLXXXXX 185
E +DI MID AK AD+ +L+ID S+G E+ET EFLN++ HGLP V+GV+THL
Sbjct: 123 EVNDDILHMIDVAKIADICILVIDGSYGIELETLEFLNILYTHGLPKVLGVVTHLDKFKD 182
Query: 186 XXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRT 245
+ EL G+KLF LSG+ +Y K +I NL +F+SV+K +SWR
Sbjct: 183 SKSIRKRKKKLNKRYSEELVEGSKLFFLSGIQNNRYNKTEIRNLCKFLSVIKKPIISWRE 242
Query: 246 SHPYIL 251
H YIL
Sbjct: 243 QHGYIL 248
Score = 125 (49.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 879 GIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNL 938
G RCTF D+I MSD+V ++ + +V+I +FY +KI K+I ELR +N
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-----FDIENKI----KSINELRYLYN- 1297
Query: 939 SIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPK 978
I VN ++ Y++I R + I L LPF+SKPK
Sbjct: 1298 -IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLPFKSKPK 1336
Score = 125 (49.1 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 42/143 (29%), Positives = 65/143 (45%)
Query: 270 CDRNV--AIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEK 327
CD + +I GY+ G + K KVHI GD + + L +P L K +
Sbjct: 307 CDEKIKISIEGYVYGSKIYKNQKVHIPNIGDVEIDNIQILQEPFKLDEQKKNPNI----- 361
Query: 328 LFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSII 387
YAPMS +G+L +D D +YI I + V F+ + + L + T P D EK+
Sbjct: 362 --YAPMSDVGNLTFDFDNMYIHIPKNKVNFTREEFL---LADQREET-IPGDHSGEKNGN 415
Query: 388 SLFSQKPNVLSDATNNAKDMDDD 410
+L + D ++ D+ DD
Sbjct: 416 TLKDDEGG--GDGDDDDDDVGDD 436
Score = 59 (25.8 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 548 RDRFVTGDWSKAAQRNQVS--KGNSEGDDSDDAVSGD-FEDLETVEKHQG--HIKDNSGS 602
R+ + GD S N + +G +GDD DD V D +D + + G ++ D+ G+
Sbjct: 400 REETIPGDHSGEKNGNTLKDDEGGGDGDDDDDDVGDDNVDDGDDDDDDVGDDNVDDDDGN 459
Query: 603 N 603
+
Sbjct: 460 D 460
Score = 58 (25.5 bits), Expect = 1.3e-91, Sum P(5) = 1.3e-91
Identities = 39/198 (19%), Positives = 78/198 (39%)
Query: 398 SDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHE----DADVKKGEKF 453
+D +N D DDD E + ++ N EK++ + ++ + E + K +K
Sbjct: 476 NDDDDNDDDDDDDNENSDKSSHHNKQSNDN---EKYITDSIKMIRELQKSNGVFSKQQKD 532
Query: 454 SALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQXXXXXXXXXXXXFFRPKVEGNKKLR 513
+ + F ++ N + K+ P++ +S++ + + K E KL
Sbjct: 533 NLILFNET--NDNNGASNIRRKA-PSNVYISEKQKKKKQQDS-----YVNEKAEEYNKLE 584
Query: 514 EVLDGRLFNMDE--CSKFN---SYGDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKG 568
+L + N +E C+ N S D K E R + D S N ++
Sbjct: 585 SILYEKKNNDEEYYCAN-NVTISSDDDKEENDASFREFYRKYGLNADMSDDGGNNDINIY 643
Query: 569 NSEGDDSDDAVSGDFEDL 586
N G +S++ + ++ L
Sbjct: 644 N--GQESEEKLKDTYDKL 659
Score = 51 (23.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 24/112 (21%), Positives = 51/112 (45%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSG--SNAI----ENEYESAVERRLKK--I 620
+++ DD+DD D E+ + H DN +++I E + + V + +K +
Sbjct: 475 DNDDDDNDDDDDDDNENSDKSSHHNKQSNDNEKYITDSIKMIRELQKSNGVFSKQQKDNL 534
Query: 621 SLRKEIDEKDGAK-FHCGQPNEIGLVDKMKEEIEFRKQMN--IAELNDLDEV 669
L E ++ +GA P+ + + +K K++ + +N E N L+ +
Sbjct: 535 ILFNETNDNNGASNIRRKAPSNVYISEKQKKKKQQDSYVNEKAEEYNKLESI 586
Score = 51 (23.0 bits), Expect = 6.7e-51, Sum P(5) = 6.7e-51
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 568 GNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSN--AIENEYESAVERRLK-KISLRK 624
GN + DD +D D +D + + DN S+ + N+ + E+ + I + +
Sbjct: 458 GNDDDDDDNDDDDNDDDDNDDDDNDDDDDDDNENSDKSSHHNKQSNDNEKYITDSIKMIR 517
Query: 625 EIDEKDG 631
E+ + +G
Sbjct: 518 ELQKSNG 524
Score = 48 (22.0 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 505 KVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEVYESIRDRF---VTGDWSKAAQ 561
K E + RE N D S D+ G+E E ++D + + G +
Sbjct: 611 KEENDASFREFYRKYGLNAD-MSDDGGNNDINIYNGQESEEKLKDTYDKLIDGGHDE--- 666
Query: 562 RNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSN 603
+ + GD++DD D ++ + E++ D+ N
Sbjct: 667 -DDYDDDENVGDENDDDEENDDDENDDDEENDDDENDDDEEN 707
Score = 40 (19.1 bits), Expect = 8.0e-52, Sum P(5) = 8.0e-52
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLK 618
+ E DD D+ V D E+ + E ++ D + + +++Y + + LK
Sbjct: 723 DDENDDDDENVGDDDENDDDDE----NVGDENIDDDDDDDYNNYNNKELK 768
Score = 39 (18.8 bits), Expect = 7.2e-42, Sum P(3) = 7.2e-42
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 646 DKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGT--YLRLGIHDVP 691
D +E +K N L + DE ++ +EG+ G+ Y +H +P
Sbjct: 289 DNDNDEENEKKLTNF--LTNCDEKIKISIEGYVYGSKIYKNQKVH-IP 333
Score = 38 (18.4 bits), Expect = 1.3e-51, Sum P(5) = 1.3e-51
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 644 LVDKMKEEIEFRKQMNIAELNDLDE 668
L+D +E ++ N+ + ND DE
Sbjct: 659 LIDGGHDEDDYDDDENVGDENDDDE 683
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 178/346 (51%), Positives = 229/346 (66%)
Query: 682 YLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIIL 730
Y+R+ I +VP E V FDP +P+++GG+G E NVGY+Q +LK+RDPII
Sbjct: 2 YVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIF 61
Query: 731 SIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQA 790
S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FWGP+ P TG +AIQ+ S
Sbjct: 62 SVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIMP 121
Query: 791 SFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTV 850
FRI AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RTV
Sbjct: 122 DFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVARFEGAVIRTV 181
Query: 851 SGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYN 910
SGIRGQ+KKA + P EG R TFED++LMSD+VFMR W V +P FYN
Sbjct: 182 SGIRGQIKKALRA------------P-EGAFRATFEDKLLMSDIVFMRTWYPVSVPAFYN 228
Query: 911 PLTTAMQP-RDK-IWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQ 968
P+T+ ++P +K W GM+T +LR H + + NKDSLYK I R+ + FN L IPK+LQ
Sbjct: 229 PVTSLLKPVGEKDTWSGMRTTGQLRLVHGIKLKPNKDSLYKPIIRQKKHFNSLHIPKALQ 288
Query: 969 AALPFESKPKDIPSRKRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
ALPF+SKPK + + R AV+ EP ERK+ AL+ L +
Sbjct: 289 KALPFKSKPKTQAKAGKTPKDRLRPAVIREPHERKILALLDALSTV 334
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 174/341 (51%), Positives = 226/341 (66%)
Query: 687 IHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIILSIGWR 735
I ++P E V+ FDP +P+++GG+G E VGY+Q +LK+RDP+I S+GWR
Sbjct: 2 IENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRLKKHRWYKKILKSRDPVIFSVGWR 61
Query: 736 RFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRIT 795
RFQTIP+Y IED NG R+LKYTP+HMHC A FWGP+ P TG +AIQ+ S FRI
Sbjct: 62 RFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFRIA 121
Query: 796 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRG 855
AT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRG
Sbjct: 122 ATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRG 181
Query: 856 QVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTA 915
Q+KKA + P EG R +FED++LMSD+VFMR W V IP FYNP+T+
Sbjct: 182 QIKKALRA------------P-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSL 228
Query: 916 MQP-RDK-IWQGMKTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPF 973
++P +K W GM+T +LR H + + NKDSLYK I R+ + FN L IPK+LQ ALPF
Sbjct: 229 LKPVGEKDTWSGMRTTHQLRLAHGIKLKPNKDSLYKPILRQKKHFNSLHIPKALQKALPF 288
Query: 974 ESKPKDIPSRKRLFLENSR-AVVMEPQERKVHALIQHLKLI 1013
++KPK ++ + R AV+ EP ERKV AL+ L I
Sbjct: 289 KNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTI 329
>UNIPROTKB|Q2NL82 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 EMBL:CH471108 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP EMBL:AB037822
EMBL:BC019090 EMBL:BC110851 EMBL:BC126110 EMBL:AK001396
IPI:IPI00292894 RefSeq:NP_060598.3 UniGene:Hs.388170
ProteinModelPortal:Q2NL82 IntAct:Q2NL82 MINT:MINT-4860330
STRING:Q2NL82 PhosphoSite:Q2NL82 DMDM:121948971 PaxDb:Q2NL82
PeptideAtlas:Q2NL82 PRIDE:Q2NL82 DNASU:55720
Ensembl:ENST00000301364 GeneID:55720 KEGG:hsa:55720 UCSC:uc002fuj.3
CTD:55720 GeneCards:GC17M002225 HGNC:HGNC:25542 HPA:HPA024434
MIM:611214 neXtProt:NX_Q2NL82 PharmGKB:PA142670691
HOVERGEN:HBG099515 InParanoid:Q2NL82 OrthoDB:EOG4MKNFQ
GenomeRNAi:55720 NextBio:60619 PMAP-CutDB:Q2NL82 Bgee:Q2NL82
CleanEx:HS_TSR1 Genevestigator:Q2NL82 Uniprot:Q2NL82
Length = 804
Score = 226 (84.6 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 90/396 (22%), Positives = 172/396 (43%)
Query: 533 GDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSD--DAVSGDFEDLETVE 590
G +G+E YE D D+ + +++ S+ E + ++V D D + E
Sbjct: 409 GSQSGGEGDE-YEY--DDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDE 465
Query: 591 KHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDK 647
+ + + + +E + V+ + ++ R + G K F P E L
Sbjct: 466 EAEAKMLEKYKQERLEEMFPDEVDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPQD 523
Query: 648 MKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVG 707
+F+ N + + EV E+EG G Y+ L + +VP +VE F P++
Sbjct: 524 YARIFQFQNFTNTRK-SIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 582
Query: 708 GIGLGEENVGYMQVLKTRDP-----------IILSIGWRRFQTIPVYAIEDRNGWHRMLK 756
+ E+ + + ++ RDP +I G+RRF+ P+++ H++ +
Sbjct: 583 SLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQR 642
Query: 757 YTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLV 816
+ M +A + P+ P V+ + SN S + AT ++ + + + K++ L
Sbjct: 643 FLTADMALVATVYAPITFPPASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLS 700
Query: 817 GYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQP 876
G+P KIF K A+++ MF + +V + E+RT G RG +K E +G
Sbjct: 701 GHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIK----EPLGTH-------- 748
Query: 877 REGIARCTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
G +C+F+ ++ D V M + V P++ Y+P
Sbjct: 749 --GHMKCSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 781
Score = 116 (45.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 50/202 (24%), Positives = 77/202 (38%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R F P D++ ++D AK AD L L+D G++ L+ + GLP +
Sbjct: 130 KHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAV 189
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
+ + + KL L T+++ G L ++ K
Sbjct: 190 QGISGLPLKKQIDTRKKLSKAV--EKRFPHDKLLLLD-------TQQEAGMLLRQLANQK 240
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L++R Y+ D P E NN + I GY+RG L +HI G G
Sbjct: 241 QQHLAFRDRRAYLFAHAV-DFVPSEE---NNLVG-TLKISGYVRGQTLNVNRLLHIVGYG 295
Query: 298 DYSLAGVTGLADPCPL-PSAAK 318
D+ + + DP PL P K
Sbjct: 296 DFQMKQIDAPGDPFPLNPRGIK 317
>UNIPROTKB|J9NS98 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AAEX03008382 RefSeq:XP_852531.1 Ensembl:ENSCAFT00000003327
GeneID:610048 KEGG:cfa:610048 Uniprot:J9NS98
Length = 801
Score = 229 (85.7 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 87/390 (22%), Positives = 170/390 (43%)
Query: 538 SKGEEVYESI-RDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHI 596
S GE+ Y+ + R+ F+ + S+ + + E ++V D D ++ + +
Sbjct: 410 SDGEDEYDDMQREDFIEEE-SQDEGSEKEEEEEYETMTMGESVHDDLYDENVDDEAEEKM 468
Query: 597 KDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDKMKEEIE 653
+ ++ + ++ + ++ R + G K F P E L +
Sbjct: 469 LEKYKQERLQEMFPDEIDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPQDYARIFQ 526
Query: 654 FRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGE 713
F+ N + E+ E+EG G Y+ L + +VP +VEYF P++ + E
Sbjct: 527 FQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHE 585
Query: 714 ENV-----------GYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHM 762
+ + G ++ +K ++ +I G+RRF+ P+++ H+ ++ +
Sbjct: 586 QKMSVLNMVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADV 645
Query: 763 HCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKI 822
+ +GP+ P V+ + SN S + AT +L + + + K+I L G+P KI
Sbjct: 646 ALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKI 703
Query: 823 FKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIAR 882
F K A+++ MF S +V + E+RT G RG +K E +G G +
Sbjct: 704 FTKMAVVRYMFFSREDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMK 749
Query: 883 CTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
C+F+ ++ D V M + V P++ Y+P
Sbjct: 750 CSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 778
Score = 109 (43.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 51/200 (25%), Positives = 79/200 (39%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPN----V 173
K R F P D++ ++D AK AD L L+D G++ L+ + GLP V
Sbjct: 127 KHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGWDSIGDYCLSCLFAQGLPTYTLAV 186
Query: 174 MGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFI 233
G+ + L F ++ KL L T+++ L +
Sbjct: 187 QGI-SGLPPRKQIDARKKLSKTVEKRFPSD-----KLLLLD-------TQQEAEMLLRQL 233
Query: 234 SVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHI 293
+ K L++R Y+ D P E NN + I GY+RG L + +HI
Sbjct: 234 ANQKQRHLAFRDRRAYLFAHA-ADFVPSEE---NNLVG-TLKISGYVRGQTLNVNSLLHI 288
Query: 294 AGAGDYSLAGVTGLADPCPL 313
G GD+ + + DP PL
Sbjct: 289 IGQGDFQMKQIDAPMDPFPL 308
Score = 97 (39.2 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 49/232 (21%), Positives = 93/232 (40%)
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
T+++ L ++ K L++R Y+ D P E NN + I GY+R
Sbjct: 222 TQQEAEMLLRQLANQKQRHLAFRDRRAYLFAHA-ADFVPSEE---NNLVG-TLKISGYVR 276
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKE-KLFYAPMSGLGDLL 340
G L + +HI G GD+ + + DP PL K D + M + D+
Sbjct: 277 GQTLNVNSLLHIIGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADM- 335
Query: 341 YDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDA 400
++D + D Q S +V + ++ Q +P +++L S+ + L ++
Sbjct: 336 -EEDLKVVMKADPDKQESLQTEVNLDPMEGEQT--WPTEEEL--------SEANDFLKES 384
Query: 401 TNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
+ K + T + +G S+G E + + + E++ + EK
Sbjct: 385 SKVVKKVPKGTSSYQAEWILDEDGESDGEDEYDDMQREDFIEEESQDEGSEK 436
Score = 41 (19.5 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 12 RQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
R+ + KK+SK+ +K+ P+ K + +A+ + + A ++QR L
Sbjct: 195 RKQIDARKKLSKTV----EKRFPSDKLLLLDTQQEAEMLLRQLANQKQRHL 241
>UNIPROTKB|Q5R434 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9601 "Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:CR861426 RefSeq:NP_001127041.1
UniGene:Pab.787 GeneID:100174068 KEGG:pon:100174068 Uniprot:Q5R434
Length = 805
Score = 221 (82.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 89/397 (22%), Positives = 172/397 (43%)
Query: 533 GDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDS---DDAVSGDFEDLETV 589
G +G+E YE D D+ + +++ S+ E ++ ++V D D +
Sbjct: 409 GSQSGGEGDE-YEY--DDMEHEDFMEEESQDESSEEEEEEYETMTIGESVHDDLYDKKID 465
Query: 590 EKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVD 646
E+ + + + +E + V+ + ++ R + G K F P E L
Sbjct: 466 EEAEAKMLEKYKQERLEEMFPDEVDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPQ 523
Query: 647 KMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLV 706
+F+ N + + EV E+EG G Y+ L + +VP +VE F P++
Sbjct: 524 DYARIFQFQNFTNTRK-SIFKEVEEKEVEGAEVGCYVTLHVSEVPVSVVECFRQGTPLIA 582
Query: 707 GGIGLGEENVGYMQVLKTRDP-----------IILSIGWRRFQTIPVYAIEDRNGWHRML 755
+ E+ + + ++ RDP +I G+RRF+ P+++ H++
Sbjct: 583 FSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQ 642
Query: 756 KYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKL 815
++ M +A + P+ P V+ + SN S + AT ++ + + + K++ L
Sbjct: 643 RFLTADMALVATVYAPITFPPASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVL 700
Query: 816 VGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQ 875
G+P K+F K A+++ MF + +V + E+RT G RG +K E +G
Sbjct: 701 SGHPLKMFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIK----EPLGTH------- 749
Query: 876 PREGIARCTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
G +C+F ++ D V M + V P++ Y+P
Sbjct: 750 ---GHMKCSFNGKLKSQDTVLMNLYKRV-FPKWTYDP 782
Score = 111 (44.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 49/202 (24%), Positives = 77/202 (38%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R F P D++ ++D AK AD L L+D G++ L+ + GLP +
Sbjct: 130 KHRWFFTSARPGDLHIVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAV 189
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
+ + + KL L T+++ G L ++ K
Sbjct: 190 QGISGLPLKKQIDARKKLSKAV--EKRFPHDKLLLLD-------TQQEAGMLLRQLANQK 240
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L++R Y+ + V E NN + I GY+RG L +HI G G
Sbjct: 241 QQHLAFRDRRAYLFARAVDFVASEE----NNLVG-TLKISGYVRGQTLNVNRLLHIVGHG 295
Query: 298 DYSLAGVTGLADPCPL-PSAAK 318
D+ + + DP PL P K
Sbjct: 296 DFQMKQIDAPGDPFPLNPRGIK 317
>UNIPROTKB|Q5XGY1 [details] [associations]
symbol:tsr1 "Pre-rRNA-processing protein TSR1 homolog"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:BC084296 RefSeq:NP_001088282.1
UniGene:Xl.8091 ProteinModelPortal:Q5XGY1 PRIDE:Q5XGY1
GeneID:495115 KEGG:xla:495115 Xenbase:XB-GENE-5753645
Uniprot:Q5XGY1
Length = 815
Score = 178 (67.7 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 82/373 (21%), Positives = 163/373 (43%)
Query: 554 GDWSKAAQRNQ-VSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESA 612
G ++ A+ ++ ++ +S DD D + E+ + +EK++ +D + ++ +
Sbjct: 448 GSGNEEAEESETLTIPDSTRDDKYDENVDEQEEEQMLEKYKLQRQDEVFPDEVDTPRDQI 507
Query: 613 VERRLKKISLRKEIDEKD-GAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDEVTR 671
R +K K K + P + + + + RK++ E + DE
Sbjct: 508 ARIRFQKYRGLKSFRTSPWDVKENL--PRDYARIFQFHDFFRTRKRV-FKEEEEKDE--- 561
Query: 672 LELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP---- 727
G G Y+ + I VP ++E+F P+++ + E+ + M +L R P
Sbjct: 562 ----GAMVGWYVTVHISAVPVSVMEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNE 617
Query: 728 -------IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLA-PPQTGV 779
+I G+RRF+ P+++ H+ ++ + + P+ PP + +
Sbjct: 618 PIKAKEELIFHCGFRRFRASPLFSQHSSADKHKSERFLRSDTSVVVTVYAPITFPPASVL 677
Query: 780 VAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEV 839
V Q ++ Q + AT +L N + + K+I L G+P KI K+TA+++ MF + +V
Sbjct: 678 VFKQRYNGMQD---LVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDV 734
Query: 840 AQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRG 899
+ E+RT G RG +K E +G G +C F+ ++ D V M
Sbjct: 735 LWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCHFDGQLKSQDTVLMNL 780
Query: 900 WADVEIPRF-YNP 911
+ V P++ ++P
Sbjct: 781 YKRV-YPKWTFDP 792
Score = 149 (57.5 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 59/220 (26%), Positives = 99/220 (45%)
Query: 107 EVRGPVTVVSGK-KRRLQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNL 164
+++G + +V K K+R F++ +D+ ++D AK AD L L+D G++ L+
Sbjct: 122 QIKGLLALVCPKVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDPQEGWDSYGDYCLSC 181
Query: 165 MQNHGLPN-VMGV--LTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKY 221
+ GLP+ V+ V + ++ F T+ AKLF+L
Sbjct: 182 LFAQGLPSYVLAVQGMNYIPIKKRADIKKQLSKVIENRF-TD----AKLFQLD------- 229
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
T+++ L IS K L++R+ Y+L R D P + + + + GY+R
Sbjct: 230 TEQEAAVLIRQISTQKQRHLAFRSRRSYMLAQR-ADFQPTDESGLVG----TLKLSGYVR 284
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADPCPL-PSAAKKK 320
G L VHI G GD+ ++ + DP PL P K K
Sbjct: 285 GQELNVNRLVHIVGHGDFHMSQIDAPPDPYPLNPRVHKPK 324
Score = 51 (23.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 568 GNSEGDDSDDA-VSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEI 626
G E DD DD + D ED ++ +D SG+ E + + + +
Sbjct: 418 GEEESDDDDDEDMEEDAED--AMDDAYSEEEDGSGNEEAEESETLTIPDSTRDDKYDENV 475
Query: 627 DEKD 630
DE++
Sbjct: 476 DEQE 479
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 512 LREVLDGRLFNMDECSKFNSYGD 534
L +V D LF +D ++SYGD
Sbjct: 154 LAKVADTLLFLLDPQEGWDSYGD 176
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 429 LGEKHVAE--EMESLHEDADVKKGEKFSALAFKKSFG 463
LG+K+ + +++ H+ +++ K + LA K+S G
Sbjct: 46 LGKKNKKDLRKLDRRHKANQIRRQRKDAVLAEKRSLG 82
Score = 37 (18.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 435 AEEMESLHEDADVKKGEKF 453
A + S H AD K E+F
Sbjct: 636 ASPLFSQHSSADKHKSERF 654
>UNIPROTKB|E2QYA6 [details] [associations]
symbol:E2QYA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030599 Uniprot:E2QYA6
Length = 656
Score = 227 (85.0 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 87/390 (22%), Positives = 170/390 (43%)
Query: 538 SKGEEVYESI-RDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHI 596
S GE+ Y+ + R+ F+ + S+ + + E ++V D D ++ + +
Sbjct: 265 SDGEDEYDDMQREDFIEEE-SQDEGSEKEEEEEYETMTMGESVHDDLYDENVDDEAEEKM 323
Query: 597 KDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDKMKEEIE 653
+ ++ + ++ + ++ R + G K F P E L +
Sbjct: 324 LEKYKQERLQEMFPDEIDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPRDYARIFQ 381
Query: 654 FRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGE 713
F+ N + E+ E+EG G Y+ L + +VP +VEYF P++ + E
Sbjct: 382 FQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHE 440
Query: 714 ENV-----------GYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHM 762
+ + G ++ +K ++ +I G+RRF+ P+++ H+ ++ +
Sbjct: 441 QKMSVLNMVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADV 500
Query: 763 HCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKI 822
+ +GP+ P V+ + SN S + AT +L + + + K+I L G+P KI
Sbjct: 501 ALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKI 558
Query: 823 FKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIAR 882
F K A+++ MF S +V + E+RT G RG +K E +G G +
Sbjct: 559 FTKMAVVRYMFFSREDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMK 604
Query: 883 CTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
C+F+ ++ D V M + V P++ Y+P
Sbjct: 605 CSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 633
Score = 97 (39.2 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 49/232 (21%), Positives = 93/232 (40%)
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
T+++ L ++ K L++R Y+ D P E NN + I GY+R
Sbjct: 77 TQQEAEMLLRQLANQKQRHLAFRDRRAYLFAHA-ADFVPSEE---NNLVG-TLKISGYVR 131
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKE-KLFYAPMSGLGDLL 340
G L + +HI G GD+ + + DP PL K D + M + D+
Sbjct: 132 GQTLNVNSLLHIIGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADM- 190
Query: 341 YDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDA 400
++D + D Q S +V + ++ Q +P +++L S+ + L ++
Sbjct: 191 -EEDLKVVMKADPDKQESLQTEVNLDPMEGEQT--WPTEEEL--------SEANDFLKES 239
Query: 401 TNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
+ K + T + +G S+G E + + + E++ + EK
Sbjct: 240 SKVVKKVPKGTSSYQAEWILDEDGESDGEDEYDDMQREDFIEEESQDEGSEK 291
Score = 42 (19.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNH 168
+SG R Q ++ ++ ++ +F LLL+D EM + N Q H
Sbjct: 44 ISGLPPRKQ-IDARKKLSKTVE-KRFPSDKLLLLDTQQEAEMLLRQLANQKQRH 95
Score = 41 (19.5 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 12 RQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
R+ + KK+SK+ +K+ P+ K + +A+ + + A ++QR L
Sbjct: 50 RKQIDARKKLSKTV----EKRFPSDKLLLLDTQQEAEMLLRQLANQKQRHL 96
>UNIPROTKB|F1MSR6 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:DAAA02048673 EMBL:DAAA02048672 IPI:IPI00867224
Ensembl:ENSBTAT00000005534 ArrayExpress:F1MSR6 Uniprot:F1MSR6
Length = 804
Score = 211 (79.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 85/388 (21%), Positives = 165/388 (42%)
Query: 539 KGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKD 598
+G+E Y+ I + S+ + + E ++V D D + E+ + + +
Sbjct: 415 EGDE-YDDIEHEDFMEEESQDEGSEEEEEEECETMTIGESVRDDLYDEKVDEEAEEKMLE 473
Query: 599 NSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDKMKEEIEFR 655
+E + V+ + ++ R + G K F P E L +F+
Sbjct: 474 KYKQQRLEEMFPDEVDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPRDYARIFQFQ 531
Query: 656 KQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEEN 715
+N E+ E+EG G Y+ L + +VP +VE+F P++ + E+
Sbjct: 532 NFINTRR-RIFKEIEEKEVEGAEVGWYVTLHVSEVPVSVVEHFKRGTPLIAFSLLPHEQK 590
Query: 716 VGYMQVLKTRDP-----------IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHC 764
+ + ++ +R P +I G+RRF+ P+++ H+ ++
Sbjct: 591 MSVLNMVVSRHPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADTAL 650
Query: 765 LAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFK 824
+ + P+ P V+ + SN S + AT +L + + + K++ L G+P KIF
Sbjct: 651 VVTVYAPITFPPASVLLFKQNSNGMHS--LIATGHLLSVDPDRMVIKRVVLSGHPFKIFT 708
Query: 825 KTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCT 884
KTA+++ MF + +V + E+RT G RG +K E +G G +C+
Sbjct: 709 KTAVVRYMFFNREDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCS 754
Query: 885 FEDRILMSDVVFMRGWADVEIPRF-YNP 911
F+ ++ D V M + V P++ Y+P
Sbjct: 755 FDGKLKSQDTVLMNLYKRV-FPKWTYDP 781
Score = 112 (44.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 54/206 (26%), Positives = 80/206 (38%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPN----V 173
K R F P D++ ++D AK AD L L+D G++ L+ + GLP V
Sbjct: 130 KHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAV 189
Query: 174 MGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFI 233
G+ + L F + KL L T+++ G L +
Sbjct: 190 QGI-SSLPPKKQIDARKKLSKAVEKRFPED-----KLLLLD-------TQQEAGMLLRQL 236
Query: 234 SVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHI 293
+ K L++R Y+ E V E V + I GY+RG L + +HI
Sbjct: 237 ANQKQRHLAFRDRRAYLFAHAAEFVPSEESDLVGT-----LKISGYVRGQALNVNSVLHI 291
Query: 294 AGAGDYSLAGVTGLADPCPL-PSAAK 318
G GD+ + V DP PL P K
Sbjct: 292 IGHGDFQMKQVDAPVDPFPLNPRVIK 317
>RGD|2322150 [details] [associations]
symbol:Tsr1 "TSR1, 20S rRNA accumulation, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
RGD:2322150 GO:GO:0005634 GO:GO:0042254 EMBL:CH473948
InterPro:IPR007034 Pfam:PF04950 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 OrthoDB:EOG4MKNFQ
IPI:IPI00370294 RefSeq:XP_002724564.1 RefSeq:XP_002727820.1
UniGene:Rn.101331 Ensembl:ENSRNOT00000003992 GeneID:100360406
KEGG:rno:100360406 Uniprot:D3ZEM8
Length = 804
Score = 198 (74.8 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 84/394 (21%), Positives = 164/394 (41%)
Query: 533 GDLKSSKGEEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKH 592
GD +G+E + I+ + S+ + + E ++V D D + E+
Sbjct: 409 GDESDGEGDESDDDIQHEGFMEEESQDGSGEEEEE-ECETMTLGESVRDDLYDEKVDEED 467
Query: 593 QGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDKMK 649
+ + + +E + ++ + ++ R + G K F P E L
Sbjct: 468 EERMLEKYKQERLEEMFPDEMDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPRDYA 525
Query: 650 EEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGI 709
+F+ +N + E+ E EG G Y+ L + +VP +VE F P++ +
Sbjct: 526 RIFQFQNFVNTRK-RIFKEIEEKETEGAEVGWYVTLHVSNVPVSVVESFRQGAPLIAFSL 584
Query: 710 GLGEENVGYMQVLKTRDP-----------IILSIGWRRFQTIPVYAIEDRNGWHRMLKYT 758
E+ + + ++ +R P +I G+RRF+ P+++ H+ ++
Sbjct: 585 LPYEQKMSVLNMVVSRSPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFL 644
Query: 759 PEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGY 818
+ + P+ P V+ + N S + AT + + + + K++ L G+
Sbjct: 645 TADAALVVTVFAPITFPPASVLLFKQRRNGMHS--LIATGHLFSVDPDRMVIKRVVLSGH 702
Query: 819 PCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPRE 878
P KIF KTA+++ MF S +V + E+RT G RG +K E +G
Sbjct: 703 PFKIFTKTAVVRYMFFSRDDVLWFKPVELRTKWGRRGHIK----EPLGTH---------- 748
Query: 879 GIARCTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
G +C+F+ ++ D V M + V P++ Y+P
Sbjct: 749 GHMKCSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 781
Score = 120 (47.3 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 50/204 (24%), Positives = 79/204 (38%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R F P D++ ++D AK AD L L+D G++ L+ + GLP M +
Sbjct: 130 KHRWSFTYARPGDLHTLLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYMLAV 189
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
L + + KL L T+++ G L ++ K
Sbjct: 190 QGLPSLPPKRQTDARKKLNKTV--EKRFPEDKLLLLD-------TQQESGMLLRQLANQK 240
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L++R Y+ D P E + + I GY+RG L + +HI G G
Sbjct: 241 QRHLAFRDRRAYLFAHD-ADFMPSEESDLVG----TLKISGYIRGRTLNVNSLLHIVGHG 295
Query: 298 DYSLAGVTGLADPCPL-PSAAKKK 320
D+ + + DP PL P K +
Sbjct: 296 DFQMNQIDAPVDPFPLNPRVVKSQ 319
Score = 66 (28.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 30/113 (26%), Positives = 53/113 (46%)
Query: 541 EEVYESIRDRF-VTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDN 599
+E +S++ R V K Q EGD+SD GD D + ++ H+G +++
Sbjct: 377 DEANDSLKQRSRVVKKVPKGTSNYQAEWILDEGDESDG--EGDESD-DDIQ-HEGFMEEE 432
Query: 600 SGSNAIENEYESAVERRLKKISLRKEI-DEKDGAKFHCGQPNEIGLVDKMKEE 651
S + E E E L + S+R ++ DEK + +E +++K K+E
Sbjct: 433 SQDGSGEEEEEECETMTLGE-SVRDDLYDEK------VDEEDEERMLEKYKQE 478
>ZFIN|ZDB-GENE-030131-3762 [details] [associations]
symbol:tsr1 "TSR1, 20S rRNA accumulation, homolog
(yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
ZFIN:ZDB-GENE-030131-3762 GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074945
EMBL:CT027805 IPI:IPI00817275 PRIDE:E7FCX4
Ensembl:ENSDART00000052645 ArrayExpress:E7FCX4 Bgee:E7FCX4
Uniprot:E7FCX4
Length = 836
Score = 184 (69.8 bits), Expect = 7.3e-19, Sum P(3) = 7.3e-19
Identities = 61/258 (23%), Positives = 117/258 (45%)
Query: 673 ELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVL---------- 722
E +G G Y+ L I DVP ++E F P+++ + E+ + M VL
Sbjct: 580 EEDGAMVGWYVTLHIVDVPPSVMESFQTGKPLVLVSLLPHEQKMSVMNVLVRQHPSNTEP 639
Query: 723 -KTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVA 781
K+++ ++ G+RRF+ +++ H++ ++ + F+ P+ P GV+
Sbjct: 640 IKSKEELVFQCGFRRFRASAIFSQHTTGDKHKLERFLRPDAPTIMSFYAPITFPTAGVLV 699
Query: 782 IQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 841
+ N + AT +L + + K+I L G+P KI +++A+++ MF + ++
Sbjct: 700 FKQRDNGMQD--LVATGSLLSCDPRRVVLKRIVLSGHPFKINRRSAVVRYMFFNRDDILW 757
Query: 842 CEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWA 901
+ E+RT G RG +K+A +G G +C F+ ++ D V M +
Sbjct: 758 FKPVELRTKWGRRGHIKEA----LGTH----------GHMKCVFDSQLRSQDTVLMNLYK 803
Query: 902 DVEIPRF-YNPLTTAMQP 918
V P + Y+P P
Sbjct: 804 RV-YPHWTYDPYVPVPLP 820
Score = 132 (51.5 bits), Expect = 7.3e-19, Sum P(3) = 7.3e-19
Identities = 52/214 (24%), Positives = 86/214 (40%)
Query: 119 KRRLQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K+R F +D++ ++D AK AD + ++D++ G++ L+ + GLP+ L
Sbjct: 141 KQRFTFYRPDTDDLHSLLDVAKIADSLVFVLDSNEGWDSYGEYCLSCLFAQGLPS--HAL 198
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
+ A+LF + +D L +S K
Sbjct: 199 VCQGVADLAVKKRTESRRALSRLVESRFPEARLFPVD-------CDQDAVLLLRHLSAQK 251
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L +R+ ++L R V P + + GY+RGC L+ VHI G G
Sbjct: 252 QRRLGFRSRRSHLLAQRATYV--PNNSQSGTGLG-TLCVSGYIRGCPLQVNRLVHITGHG 308
Query: 298 DYSLAGVTGLADPCPL---PSAAKKKGLRDKEKL 328
D+ L+ + ADP P+ S K G RD E +
Sbjct: 309 DFQLSQIDAPADPLPIVLSTSRPAKPG-RDVEMM 341
Score = 49 (22.3 bits), Expect = 7.3e-19, Sum P(3) = 7.3e-19
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 556 WSKAAQRNQVSKGNSEGDDSDDAVSGDFED 585
W + G +GDD DD+ D +D
Sbjct: 413 WIIDENAEEEGDGGDDGDDDDDSCDDDDDD 442
Score = 43 (20.2 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 501 FFRPKVEGNKKLREVL---DGRLFNMDECSKFNSYGD 534
F+RP + L +V D +F +D ++SYG+
Sbjct: 146 FYRPDTDDLHSLLDVAKIADSLVFVLDSNEGWDSYGE 182
>MGI|MGI:2144566 [details] [associations]
symbol:Tsr1 "TSR1 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 MGI:MGI:2144566 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:AL604066
UniGene:Mm.220843 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 HOVERGEN:HBG099515
OrthoDB:EOG4MKNFQ EMBL:AK030545 EMBL:AK134365 EMBL:AK154063
EMBL:AK162686 EMBL:AK165662 EMBL:BC031531 EMBL:AK129350
IPI:IPI00420546 IPI:IPI00875206 IPI:IPI00875360 RefSeq:NP_796299.2
ProteinModelPortal:Q5SWD9 IntAct:Q5SWD9 STRING:Q5SWD9
PhosphoSite:Q5SWD9 PaxDb:Q5SWD9 PRIDE:Q5SWD9
Ensembl:ENSMUST00000045807 GeneID:104662 KEGG:mmu:104662
UCSC:uc007kcm.1 UCSC:uc007kcn.1 UCSC:uc007kco.1 InParanoid:Q5SWD9
NextBio:357196 Bgee:Q5SWD9 CleanEx:MM_TSR1 Genevestigator:Q5SWD9
Uniprot:Q5SWD9
Length = 803
Score = 201 (75.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 88/399 (22%), Positives = 171/399 (42%)
Query: 533 GDLKSSKGEEVYESIR-DRFV---TGDWSKAAQRNQ---VSKGNSEGDDS-DDAVSGDFE 584
GD +G E Y+ I+ + F+ + D S + + ++ G S DD D+ V + E
Sbjct: 409 GDESDGEGGE-YDDIQHEGFMEEESQDGSGEEEEEECETMTLGESVRDDLYDEKVDAEDE 467
Query: 585 DLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGL 644
+ +EK++ + + ++ + A R +K K P +
Sbjct: 468 E-RMLEKYKQERLEEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKE-NLPRDYAR 525
Query: 645 VDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPV 704
+ + + + RK++ E+ E EG G Y+ L + DVP +VEYF P+
Sbjct: 526 IFQFQNFVNTRKRI-------FKEIEEKEAEGAEVGWYVTLHVSDVPVSVVEYFRQGAPL 578
Query: 705 LVGGIGLGEENVGYMQVLKTRDP-----------IILSIGWRRFQTIPVYAIEDRNGWHR 753
+ + E+ + + ++ +R+P +I G+RRF+ P+++ H+
Sbjct: 579 IAFSLLPYEQKMSVLNMVVSRNPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHK 638
Query: 754 MLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKI 813
++ + + P+ P V+ + N S + AT + + + + K++
Sbjct: 639 FQRFLTADAAFVVTVFAPITFPPASVLLFKQRRNGMHS--LIATGHLFSVDPDRMVIKRV 696
Query: 814 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 873
L G+P KIF K A+++ MF + +V + E+RT G RG +K E +G
Sbjct: 697 VLSGHPFKIFTKMAVVRYMFFNREDVMWFKPVELRTKWGRRGHIK----EPLGTH----- 747
Query: 874 GQPREGIARCTFEDRILMSDVVFMRGWADVEIPRF-YNP 911
G +C+F+ ++ D V M + V P++ Y+P
Sbjct: 748 -----GHMKCSFDGKLKSQDTVLMNLYKRV-FPKWTYDP 780
Score = 112 (44.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 46/194 (23%), Positives = 75/194 (38%)
Query: 128 PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLXXXXXXX 187
P D++ ++D AK AD L L+D G++ L+ + GLP + L
Sbjct: 140 PGDLHTLLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGLSGFPPKK 199
Query: 188 XXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTSH 247
+ + KL L T+++ G L ++ K L++R
Sbjct: 200 QIDARKKLSKMV--EKRFPEDKLLLLD-------TQQESGMLLRQLANQKQRHLAFRDRR 250
Query: 248 PYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGL 307
Y+ D P E + + I GY+RG L + +HI G GD+ + +
Sbjct: 251 AYLFA-HVADFVPSEESDLVG----TLKISGYVRGRTLNVNSLLHIVGHGDFQMNQIDAP 305
Query: 308 ADPCPL-PSAAKKK 320
DP PL P K +
Sbjct: 306 VDPFPLNPRVIKSQ 319
>UNIPROTKB|F1PXP0 [details] [associations]
symbol:F1PXP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030598 OMA:THEVERF Uniprot:F1PXP0
Length = 725
Score = 189 (71.6 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 68/317 (21%), Positives = 138/317 (43%)
Query: 538 SKGEEVYESI-RDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHI 596
S GE+ Y+ + R+ F+ + S+ + + E ++V D D ++ + +
Sbjct: 413 SDGEDEYDDMQREDFIEEE-SQDEGSEKEEEEEYETMTMGESVHDDLYDENVDDEAEEKM 471
Query: 597 KDNSGSNAIENEYESAVERRLKKISLRKEIDEKDGAK-FHCG--QPNEIGLVDKMKEEIE 653
+ ++ + ++ + ++ R + G K F P E L +
Sbjct: 472 LEKYKQERLQEMFPDEIDTP-RDVAARIRFQKYRGLKSFRTSPWDPKE-NLPRDYARIFQ 529
Query: 654 FRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGE 713
F+ N + E+ E+EG G Y+ L + +VP +VEYF P++ + E
Sbjct: 530 FQNFTNTRK-RIFKEIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHE 588
Query: 714 ENV-----------GYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHM 762
+ + G ++ +K ++ +I G+RRF+ P+++ H+ ++ +
Sbjct: 589 QKMSVLNMVVSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADV 648
Query: 763 HCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKI 822
+ +GP+ P V+ + SN S + AT +L + + + K+I L G+P KI
Sbjct: 649 ALVVTIYGPITFPPASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKI 706
Query: 823 FKKTALIKDMFTSDLEV 839
F K A+++ MF S +V
Sbjct: 707 FTKMAVVRYMFFSREDV 723
Score = 109 (43.4 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 51/200 (25%), Positives = 79/200 (39%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPN----V 173
K R F P D++ ++D AK AD L L+D G++ L+ + GLP V
Sbjct: 130 KHRWFFTSARPGDLHTVLDMAKVADTILFLLDPLEGWDSIGDYCLSCLFAQGLPTYTLAV 189
Query: 174 MGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFI 233
G+ + L F ++ KL L T+++ L +
Sbjct: 190 QGI-SGLPPRKQIDARKKLSKTVEKRFPSD-----KLLLLD-------TQQEAEMLLRQL 236
Query: 234 SVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHI 293
+ K L++R Y+ D P E NN + I GY+RG L + +HI
Sbjct: 237 ANQKQRHLAFRDRRAYLFAHA-ADFVPSEE---NNLVG-TLKISGYVRGQTLNVNSLLHI 291
Query: 294 AGAGDYSLAGVTGLADPCPL 313
G GD+ + + DP PL
Sbjct: 292 IGQGDFQMKQIDAPMDPFPL 311
Score = 97 (39.2 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 49/232 (21%), Positives = 93/232 (40%)
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
T+++ L ++ K L++R Y+ D P E NN + I GY+R
Sbjct: 225 TQQEAEMLLRQLANQKQRHLAFRDRRAYLFAHA-ADFVPSEE---NNLVG-TLKISGYVR 279
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDKE-KLFYAPMSGLGDLL 340
G L + +HI G GD+ + + DP PL K D + M + D+
Sbjct: 280 GQTLNVNSLLHIIGQGDFQMKQIDAPMDPFPLNFRMIKSQKEDPGVTMEICAMDAVADM- 338
Query: 341 YDKDAVYIDINDHFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDA 400
++D + D Q S +V + ++ Q +P +++L S+ + L ++
Sbjct: 339 -EEDLKVVMKADPDKQESLQTEVNLDPMEGEQT--WPTEEEL--------SEANDFLKES 387
Query: 401 TNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEK 452
+ K + T + +G S+G E + + + E++ + EK
Sbjct: 388 SKVVKKVPKGTSSYQAEWILDEDGESDGEDEYDDMQREDFIEEESQDEGSEK 439
Score = 46 (21.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 536 KSSKGEEVYESIRDRFVTGDWSKAAQRNQVSK 567
+ KGEE+ I + V + SK QR++ S+
Sbjct: 28 RDGKGEEIGLKILSKKVRKELSKVDQRHRASQ 59
Score = 41 (19.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 12 RQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
R+ + KK+SK+ +K+ P+ K + +A+ + + A ++QR L
Sbjct: 198 RKQIDARKKLSKTV----EKRFPSDKLLLLDTQQEAEMLLRQLANQKQRHL 244
>UNIPROTKB|C9JUY9 [details] [associations]
symbol:AGAP10 "Arf-GAP with GTPase, ANK repeat and PH
domain-containing protein 10" species:9606 "Homo sapiens"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0008060 "ARF GTPase
activator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0032312 "regulation of ARF GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] Pfam:PF00169
InterPro:IPR000795 InterPro:IPR001164 InterPro:IPR001849
Pfam:PF00009 Pfam:PF01412 PRINTS:PR00405 PROSITE:PS50003
PROSITE:PS50115 SMART:SM00105 SMART:SM00233 GO:GO:0005525
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 Gene3D:1.25.40.20 InterPro:IPR020683
PROSITE:PS50297 GO:GO:0008060 GO:GO:0032312 EMBL:AL391137
HGNC:HGNC:23462 HOGENOM:HOG000007233 eggNOG:COG5192 IPI:IPI00942490
ProteinModelPortal:C9JUY9 SMR:C9JUY9 Ensembl:ENST00000413193
OMA:HYLIMTI ArrayExpress:C9JUY9 Bgee:C9JUY9 Uniprot:C9JUY9
Length = 703
Score = 236 (88.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 49/89 (55%), Positives = 55/89 (61%)
Query: 117 GKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
GKKRRL +EC DIN MID AK ADL L+LIDAS GFEME FEFLN+ Q HG P ++GV
Sbjct: 18 GKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMEMFEFLNICQAHGFPKILGV 77
Query: 177 LTHLXXXXXXXXXXXXXXXXXXXFGTELY 205
LTHL F TE+Y
Sbjct: 78 LTHLDSFKHNKQLKKTKKRLKHRFWTEVY 106
Score = 53 (23.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 309 DPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLV 368
+P P P A KKK L+ K + +S G + + Y + D +VQ + Q ++
Sbjct: 435 NPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEE-RDAWVQAIQSQ-----IL 488
Query: 369 KSLQNTK 375
SLQ+ K
Sbjct: 489 ASLQSCK 495
>UNIPROTKB|Q5VTM2 [details] [associations]
symbol:AGAP9 "Arf-GAP with GTPase, ANK repeat and PH
domain-containing protein 9" species:9606 "Homo sapiens"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0008060 "ARF GTPase activator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032312 "regulation of ARF GTPase activity" evidence=IEA]
Pfam:PF00169 InterPro:IPR000795 InterPro:IPR001164
InterPro:IPR001849 Pfam:PF00009 Pfam:PF01412 PRINTS:PR00405
PROSITE:PS50003 PROSITE:PS50088 PROSITE:PS50115 SMART:SM00105
SMART:SM00233 GO:GO:0005525 GO:GO:0043547 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 Gene3D:1.25.40.20 InterPro:IPR020683
PROSITE:PS50297 GO:GO:0008060 GO:GO:0032312 HOGENOM:HOG000007233
HOVERGEN:HBG054045 EMBL:AL591684 EMBL:BC171845 IPI:IPI00747142
IPI:IPI00943298 RefSeq:NP_001177739.1 UniGene:Hs.645346
UniGene:Hs.742298 ProteinModelPortal:Q5VTM2 SMR:Q5VTM2
PhosphoSite:Q5VTM2 DMDM:145558891 PRIDE:Q5VTM2
Ensembl:ENST00000453919 Ensembl:ENST00000456984
Ensembl:ENST00000584334 GeneID:642517 CTD:642517
GeneCards:GC10P048189 HGNC:HGNC:23463 neXtProt:NX_Q5VTM2
eggNOG:COG5192 OMA:RSCESSK ArrayExpress:Q5VTM2 Bgee:Q5VTM2
CleanEx:HS_AGAP9 Genevestigator:Q5VTM2 Uniprot:Q5VTM2
Length = 703
Score = 236 (88.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 49/89 (55%), Positives = 55/89 (61%)
Query: 117 GKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
GKKRRL +EC DIN MID AK ADL L+LIDAS GFEME FEFLN+ Q HG P ++GV
Sbjct: 18 GKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMEMFEFLNICQAHGFPKILGV 77
Query: 177 LTHLXXXXXXXXXXXXXXXXXXXFGTELY 205
LTHL F TE+Y
Sbjct: 78 LTHLDSFKHNKQLKKTKKRLKHRFWTEVY 106
Score = 53 (23.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 309 DPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLV 368
+P P P A KKK L+ K + +S G + + Y + D +VQ + Q ++
Sbjct: 435 NPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEE-RDAWVQAIQSQ-----IL 488
Query: 369 KSLQNTK 375
SLQ+ K
Sbjct: 489 ASLQSCK 495
>UNIPROTKB|F1NNP8 [details] [associations]
symbol:LOC100857289 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AADN02025881 IPI:IPI00574494 Ensembl:ENSGALT00000005046
Uniprot:F1NNP8
Length = 803
Score = 175 (66.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 63/260 (24%), Positives = 118/260 (45%)
Query: 664 NDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLK 723
N ++ + E EG G Y+ L + +VP ++E F P+++ + E+ + + L
Sbjct: 538 NIFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQKMSVLNFLV 597
Query: 724 TR-----DPI------ILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPL 772
R DP+ I G+RRF+ P+++ H++ ++ + + P+
Sbjct: 598 RRHPSNSDPVKAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRLDAALVVTVYAPI 657
Query: 773 APPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDM 832
P V+ + SN + AT +L + + I K++ L G+P KIF K A+++ M
Sbjct: 658 TFPPASVLVFKQRSNGMHD--LIATGSLLAVDPDRIIIKRLVLSGHPFKIFTKAAVVRYM 715
Query: 833 FTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMS 892
F + +V + E+RT G RG +K E +G G +C F+ ++
Sbjct: 716 FFNREDVMWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCHFDGQLKSQ 761
Query: 893 DVVFMRGWADVEIPRF-YNP 911
D V + + V P++ Y+P
Sbjct: 762 DTVLLNLYKRV-YPKWTYDP 780
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 75/341 (21%), Positives = 139/341 (40%)
Query: 119 KRRLQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K+R +FV D++ ++D AK AD L ++D G++ L+ + GLP+ L
Sbjct: 124 KQRWRFVTAQAGDLHAVMDLAKVADSLLFVLDPMDGWDSTGEHCLSCLFAQGLPSY--AL 181
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
+ + KLF L+ T+++ L ++ K
Sbjct: 182 AVPGGTDLPPKKRIDAKKKVAKAIEKWFPEVKLFPLN-------TEQESSVLLRHLATQK 234
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L++R ++L E V E V + + G++RG L + VHI G G
Sbjct: 235 QRHLAFRDRRAHMLAYAAEFVPSQESDQVGT-----LKVSGFVRGQTLNVNSLVHIVGHG 289
Query: 298 DYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQF 357
D+ ++ V DP L + KG + + + S G ++D + D Q
Sbjct: 290 DFQMSQVDAPPDPLSL-NPRVVKGQKKSQGMDVQEDSANGTDEMEEDVKILMKADASKQE 348
Query: 358 SEYQDVGVTLVKSLQNTKYPIDKKLEKSIISLFSQKPNV-LSDATNN--AKDMDDDTEYI 414
S +V ++ Q +P +++L+++ S K V + T+ A + DD E
Sbjct: 349 SLQSEVVPDPMEGEQT--WPTEEELQEAEASQKENKRVVKVPKGTSKYQAAWIVDDGE-- 404
Query: 415 HGKQYQTREGTSNGLG----EKHVAEEMESLHEDADVKKGE 451
G + + + + G E+ V++E ES E+ ++ + E
Sbjct: 405 EGSEEEDDDDDDDDFGDDMMEEAVSQEGESSEEEEELAEEE 445
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 567 KGNSEGDDSDDAVSGDFED--LETVEKHQGHIKDNSGSNAIENEYES-AVERRLKKISLR 623
+G+ E DD DD DF D +E +G + A E E E+ V ++
Sbjct: 405 EGSEEEDDDDD--DDDFGDDMMEEAVSQEGESSEEEEELA-EEECETMTVSECVRDDQYD 461
Query: 624 KEIDEKD 630
++++E +
Sbjct: 462 EKVEEDE 468
Score = 37 (18.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 399 DATNNAKDMDDDTEYIHGKQYQ--TREGTSNGLGEKHVAEEMESL 441
+ + D DDD ++ + ++EG S+ E+ EE E++
Sbjct: 405 EGSEEEDDDDDDDDFGDDMMEEAVSQEGESSEEEEELAEEECETM 449
Score = 37 (18.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 411 TEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDA-----DVKKGEKFSALAFKKSF 462
+E + QY + + EK+ E M+ + D DV +F KSF
Sbjct: 452 SECVRDDQYDEKVEEDEQMLEKYKQERMDEMFPDEVDTPRDVPARVRFQKYRGLKSF 508
>TAIR|locus:2035893 [details] [associations]
symbol:AT1G42440 "AT1G42440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP EMBL:AF361826 EMBL:AY133551 EMBL:BT000755
IPI:IPI00527453 RefSeq:NP_564480.1 UniGene:At.19120
UniGene:At.67019 ProteinModelPortal:Q9ASU6 IntAct:Q9ASU6
STRING:Q9ASU6 PaxDb:Q9ASU6 PRIDE:Q9ASU6 EnsemblPlants:AT1G42440.1
GeneID:840848 KEGG:ath:AT1G42440 TAIR:At1g42440 InParanoid:Q9ASU6
PhylomeDB:Q9ASU6 ProtClustDB:CLSN2688391 ArrayExpress:Q9ASU6
Genevestigator:Q9ASU6 Uniprot:Q9ASU6
Length = 793
Score = 154 (59.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 60/234 (25%), Positives = 104/234 (44%)
Query: 680 GTYLRLGIHDVPF----EMVEYFDPCHPVLVGGIGLGEENV-----------GYMQVLKT 724
G+Y+RL I +VP ++ + P++ G+ E + GY +KT
Sbjct: 556 GSYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHFSVKKYDGYEAPIKT 615
Query: 725 RDPIILSIGWRRFQTIPVYAIED-RNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQ 783
++ ++ +G+R+F PV+A ++ + H+M ++ LA +GP++ P +V ++
Sbjct: 616 KEELMFHVGFRQFIARPVFATDNFSSDKHKMERFLHPGCFSLASIYGPISFPPLPLVVLK 675
Query: 784 NFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCE 843
S I A + I KKI L GYP ++ K A ++ MF + +V +
Sbjct: 676 -ISEGSDPPAIAALGSLKSVEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFK 734
Query: 844 GKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
EV + G RG+VK E +G G +C F + DVV M
Sbjct: 735 PVEVWSKCGRRGRVK----EPVGTH----------GAMKCIFNGVVQQHDVVCM 774
Score = 95 (38.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 229 LAEFISVMKFHSLS---WRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNL 285
L +F+ + K L+ WR+ YI+ + + E + KC + + GYLR L
Sbjct: 229 LHKFMWLFKAQRLTVPHWRSQRSYIVARKAGMLVDDES---SGKC--TLLLSGYLRARKL 283
Query: 286 KKGTKVHIAGAGDYSLAGVTGLADPCPL 313
VH++G GD+ + + L DP PL
Sbjct: 284 SVNQLVHVSGVGDFQFSKIEVLKDPFPL 311
Score = 85 (35.0 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 39/164 (23%), Positives = 68/164 (41%)
Query: 4 QPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLH 63
Q +KAH+ R S S++ + ++ N QD + + KA R +EQ+R
Sbjct: 7 QVNKAHKTRFSSKSSRNLHRT--NLQDSGRIGKSDSNYVKGAKAARVQRGKMLREQKRAA 64
Query: 64 IPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHYTKLKVPEVRGPV--TVVSGK-KR 120
+ R+ G S+ + L + KL + G TV S + K
Sbjct: 65 VLKEKRASGGINSAPRVIVLFPLSA-SVELNSLGEDVLKLLSSDGSGIASSTVASSEYKL 123
Query: 121 RLQFVECPN-DINGMIDCAKFADLALLLIDASHGFEMETFEFLN 163
R ++ P+ D+ ++ AK ADL + AS +E + F++
Sbjct: 124 RATVLKAPHGDLLTCMEMAKVADLMAFVASASAPWEENSSNFID 167
Score = 43 (20.2 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 541 EEVYESIRDRFVTGDWSKAAQRNQVS--KGNSEGDDSDDAVSGDFEDLETVEKHQGHIKD 598
+E E D + D R + S +G + + DD S + D++T +++ + D
Sbjct: 396 DETDEEDSDNGDSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVD 455
Query: 599 NSGSNAIENEYESAVERRLKKISLRKEIDEK 629
+ E+ E ++ +KKI DE+
Sbjct: 456 D------EDLTEEQIKDEIKKIKEAYADDEE 480
>WB|WBGene00006497 [details] [associations]
symbol:tag-151 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0009792 GO:GO:0040010 GO:GO:0005730 GO:GO:0040011
EMBL:FO081114 GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
PIR:C88131 RefSeq:NP_494840.1 ProteinModelPortal:Q19329
STRING:Q19329 PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1
EnsemblMetazoa:F10G7.1.2 GeneID:173812 KEGG:cel:CELE_F10G7.1
UCSC:F10G7.1.2 CTD:173812 WormBase:F10G7.1
GeneTree:ENSGT00550000074945 InParanoid:Q19329 NextBio:881217
Uniprot:Q19329
Length = 785
Score = 119 (46.9 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 35/144 (24%), Positives = 69/144 (47%)
Query: 729 ILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLA-PPQTGVVAIQNFSN 787
I +G+R+F+ V++ ++ ++ P +A + P+ P T + Q+
Sbjct: 590 IFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKG 649
Query: 788 NQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEV 847
Q + AT +L+ N + + K+ L G+P KI ++ +++ MF + ++ + E+
Sbjct: 650 RQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFKPVEL 706
Query: 848 RTVSGIRGQVKKAAKEEIGNQPKR 871
T SG RG +K+A GN R
Sbjct: 707 YTPSGRRGHIKEAVGTH-GNMKCR 729
Score = 107 (42.7 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 44/203 (21%), Positives = 79/203 (38%)
Query: 119 KRRLQFVECPND-INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R+ F+ D ++G++D + +D+ L S + L +++ +GLP ++ V+
Sbjct: 129 KSRVSFLTPDKDNVDGVLDAIRASDVLCFLWPMSAELSEWDEQLLTIIKANGLPTIVSVV 188
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
L G E +G++ ++ L ++ K
Sbjct: 189 PGLGSIANHKKKEDVRK------GIEFIISKWSMSNAGVMPADSVTDNL-QLLRILNETK 241
Query: 238 FHSLSWRTSHPYILVDRFE--DVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAG 295
L+ + H Y+LV+ E D T C + GYLRG VH+ G
Sbjct: 242 KKPLTLQARHSYMLVENLECSDKT-------GETC--TLVAQGYLRGPEWNANNLVHLPG 292
Query: 296 AGDYSLAGVTGLADPCPLPSAAK 318
GD+ ++ + DP PL + K
Sbjct: 293 FGDFQISKIESTVDPHPLKAHNK 315
Score = 66 (28.3 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 19/85 (22%), Positives = 40/85 (47%)
Query: 573 DDSDDAVSGDFEDLETVEKHQGHIKDNSG-SNAIENEYESAVERRLKKISLRKEIDEKDG 631
+D DD+ + + ED E+ +K +G + A E ++ ++ + + K E++
Sbjct: 389 EDMDDSDNEEVEDDSEEEEPMDDLKSEAGETTASEMMFDDGIDEDINMAEVEKYRKEREN 448
Query: 632 AKFHCGQPNEIGLVDKMKEEIEFRK 656
A++ P+E+ M I F+K
Sbjct: 449 AQW----PDEVDTPMDMPARIAFQK 469
>UNIPROTKB|Q19329 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6239 "Caenorhabditis elegans" [GO:0042255 "ribosome
assembly" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0009792
GO:GO:0040010 GO:GO:0005730 GO:GO:0040011 EMBL:FO081114
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:C88131
RefSeq:NP_494840.1 ProteinModelPortal:Q19329 STRING:Q19329
PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1 EnsemblMetazoa:F10G7.1.2
GeneID:173812 KEGG:cel:CELE_F10G7.1 UCSC:F10G7.1.2 CTD:173812
WormBase:F10G7.1 GeneTree:ENSGT00550000074945 InParanoid:Q19329
NextBio:881217 Uniprot:Q19329
Length = 785
Score = 119 (46.9 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 35/144 (24%), Positives = 69/144 (47%)
Query: 729 ILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLA-PPQTGVVAIQNFSN 787
I +G+R+F+ V++ ++ ++ P +A + P+ P T + Q+
Sbjct: 590 IFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKG 649
Query: 788 NQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEV 847
Q + AT +L+ N + + K+ L G+P KI ++ +++ MF + ++ + E+
Sbjct: 650 RQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFKPVEL 706
Query: 848 RTVSGIRGQVKKAAKEEIGNQPKR 871
T SG RG +K+A GN R
Sbjct: 707 YTPSGRRGHIKEAVGTH-GNMKCR 729
Score = 107 (42.7 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 44/203 (21%), Positives = 79/203 (38%)
Query: 119 KRRLQFVECPND-INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R+ F+ D ++G++D + +D+ L S + L +++ +GLP ++ V+
Sbjct: 129 KSRVSFLTPDKDNVDGVLDAIRASDVLCFLWPMSAELSEWDEQLLTIIKANGLPTIVSVV 188
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
L G E +G++ ++ L ++ K
Sbjct: 189 PGLGSIANHKKKEDVRK------GIEFIISKWSMSNAGVMPADSVTDNL-QLLRILNETK 241
Query: 238 FHSLSWRTSHPYILVDRFE--DVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAG 295
L+ + H Y+LV+ E D T C + GYLRG VH+ G
Sbjct: 242 KKPLTLQARHSYMLVENLECSDKT-------GETC--TLVAQGYLRGPEWNANNLVHLPG 292
Query: 296 AGDYSLAGVTGLADPCPLPSAAK 318
GD+ ++ + DP PL + K
Sbjct: 293 FGDFQISKIESTVDPHPLKAHNK 315
Score = 66 (28.3 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 19/85 (22%), Positives = 40/85 (47%)
Query: 573 DDSDDAVSGDFEDLETVEKHQGHIKDNSG-SNAIENEYESAVERRLKKISLRKEIDEKDG 631
+D DD+ + + ED E+ +K +G + A E ++ ++ + + K E++
Sbjct: 389 EDMDDSDNEEVEDDSEEEEPMDDLKSEAGETTASEMMFDDGIDEDINMAEVEKYRKEREN 448
Query: 632 AKFHCGQPNEIGLVDKMKEEIEFRK 656
A++ P+E+ M I F+K
Sbjct: 449 AQW----PDEVDTPMDMPARIAFQK 469
>FB|FBgn0037073 [details] [associations]
symbol:CG7338 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0042255 InterPro:IPR007034
Pfam:PF04950 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 EMBL:BT003192 EMBL:BT044092
EMBL:AY058591 RefSeq:NP_649304.1 UniGene:Dm.1034
ProteinModelPortal:Q9VP47 IntAct:Q9VP47 MINT:MINT-823454
STRING:Q9VP47 PaxDb:Q9VP47 PRIDE:Q9VP47 EnsemblMetazoa:FBtr0078342
GeneID:40360 KEGG:dme:Dmel_CG7338 UCSC:CG7338-RA
FlyBase:FBgn0037073 InParanoid:Q9VP47 OrthoDB:EOG4QFTVF
PhylomeDB:Q9VP47 GenomeRNAi:40360 NextBio:818374 Bgee:Q9VP47
Uniprot:Q9VP47
Length = 814
Score = 156 (60.0 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 59/239 (24%), Positives = 104/239 (43%)
Query: 673 ELEGFRTGTYLRLGIHDVPFEMVEYFDPCH---PVLVGGIGLGEENVGYMQV-------- 721
E EG G Y+ L + +VP F ++V G+ E + M V
Sbjct: 551 EFEGVLPGLYVTLYVINVPESRWNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMPDS 610
Query: 722 ---LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTG 778
LK+++ +I+ G+RRF P+Y+ H+ +Y + A F+ P+ P
Sbjct: 611 EVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFPPAP 670
Query: 779 VVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLE 838
V+A + N ++ + A +L N + + K++ L G+P +I +K+A I+ MF +
Sbjct: 671 VLAFK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKED 728
Query: 839 VAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
V + ++RT G G +K E +G G +C F+ ++ D FM
Sbjct: 729 VEYFKPVKLRTKCGRLGHIK----ESLGTH----------GHMKCYFDGQLRSYDTAFM 773
Score = 83 (34.3 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 50/204 (24%), Positives = 81/204 (39%)
Query: 119 KRRLQFVECP----NDINGMIDCAKFADLALLLIDASHGFEMETFE-----FLNLMQNHG 169
K+R FV P N++ + D K D LLL A+ G + E F+ N+M G
Sbjct: 131 KQRFAFVTPPVGRGNELIAL-DYLKVCDTTLLLTTAAFGDD-EIFDRWGQRIFNMMSAQG 188
Query: 170 LPNVMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNL 229
+P + L L ++L K+ +L + + IG
Sbjct: 189 IPTPVVALMDLESINPKRRPAAKQAAQKVI--SKLLPEEKIMQLDTASEALNVMRRIGGQ 246
Query: 230 AEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGT 289
+ I H+++ R H + V F+ + P ++ + + G+LRG +L
Sbjct: 247 KKRI----LHNVANRP-HLFGDVVEFKPGSDP-----SDDLG-TLEVTGFLRGQSLNVNG 295
Query: 290 KVHIAGAGDYSLAGVTGLADPCPL 313
VHI G GD+ L+ V DP L
Sbjct: 296 LVHIPGLGDFQLSQVVAPPDPYKL 319
Score = 42 (19.8 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 571 EGDDSDDAVSGDFEDLETVEKHQGHIK-DNSGSNAIENEYE---SAVERRLKKISLRKEI 626
+G D DD D +D E + ++ + DN + E+EYE S E +S+ E
Sbjct: 403 DGKDDDDMSEDDDDDKE--DDNEDFMSCDNK---SFEDEYEKRDSDTEEFQDTVSVASEA 457
Query: 627 ---DEK 629
DEK
Sbjct: 458 AINDEK 463
>DICTYBASE|DDB_G0278331 [details] [associations]
symbol:DDB_G0278331 "Pre-rRNA-processing protein TSR1
homolog" species:44689 "Dictyostelium discoideum" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
dictyBase:DDB_G0278331 GO:GO:0005730 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0042254 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 KO:K14799 OMA:DAEQTWP RefSeq:XP_642295.1
STRING:Q54YA7 EnsemblProtists:DDB0205380 GeneID:8621502
KEGG:ddi:DDB_G0278331 ProtClustDB:CLSZ2729113 Uniprot:Q54YA7
Length = 826
Score = 138 (53.6 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 713 EENVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRN-GWHRMLKYTPEHMHCLAMFWGP 771
E++ Y + +++++ + GWR+F T P+Y+I N + K+ + +A +GP
Sbjct: 637 EKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMATIYGP 696
Query: 772 LAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCK-IFKKTALIK 830
+ P ++ N+ + AT + N + I K+I L G K I KK +K
Sbjct: 697 ITYPPAPLLIFNGKDCNE----LVATGYLSSVNPDRIICKRIILTGVIAKSISKKFVTVK 752
Query: 831 DMFTSDLEVAQCEGKEVRTVSGIRGQVKK 859
DMF ++ + E+ T G G +K+
Sbjct: 753 DMFYYPEDINWFKKVELYTKMGRVGHIKE 781
Score = 86 (35.3 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
T + + +I + + + WR PY+L+++ + P +V V I G++R
Sbjct: 244 TNDECSQVLRYIENIHVNEIIWRKVRPYMLIEKSSYI-PETKV---------VTIDGFIR 293
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADP 310
G NL +HI GD+ + + + DP
Sbjct: 294 GNNLSAKQIIHIPDYGDFQIEKIELIDDP 322
Score = 70 (29.7 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 25/144 (17%), Positives = 56/144 (38%)
Query: 113 TVVSGKKRRLQFVECPN-DINGMIDCAKFADLALLLIDASHG-FEMETFEFLNLMQNHGL 170
T+ K R+ +EC + +I+ K +D+ L +IDA+ E +++ +
Sbjct: 141 TISLTSKVRMMLLECQTMAYDQVIEFCKLSDIILFVIDANQAKLNSEAERIFTIVKAQSV 200
Query: 171 PNVMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLA 230
P V+ ++ +L F + K+ + T + +
Sbjct: 201 PTVIEIIQNLDQTPIKKRNELKKSIQSV-FHFHFPNEPKVLPMD-------TNDECSQVL 252
Query: 231 EFISVMKFHSLSWRTSHPYILVDR 254
+I + + + WR PY+L+++
Sbjct: 253 RYIENIHVNEIIWRKVRPYMLIEK 276
Score = 56 (24.8 bits), Expect = 5.3e-10, Sum P(3) = 5.3e-10
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 581 GDF--EDLETVE----KHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDEKDG--- 631
GDF E +E ++ + + + +N+ +N+ N + KKI++ ++D+KD
Sbjct: 309 GDFQIEKIELIDDPHIRKKSYYTNNNNNNSNNNNTGGGEMEQDKKINILDKVDQKDKDTL 368
Query: 632 AKFHCGQP--NEIGL--VDKMKEEIEFRKQMNI 660
++ P NE L ++MKE IE K+ +
Sbjct: 369 QTWNVPDPMDNEQALPTAEEMKE-IEANKKKKL 400
Score = 52 (23.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 405 KDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDADVKKGEKFSALAFK 459
+D+D + E + G+ + G +GE+ EE E E +VK+ K+ + K
Sbjct: 428 EDLDMNQEEM-GQDKEEEMGEEEEMGEEEEEEE-EGQEELEEVKESNKWKGIKHK 480
Score = 48 (22.0 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 366 TLVKSLQNT-KYPIDKK--LEKSIISLFS----QKPNVLSDATNN 403
T+++ +QN + PI K+ L+KSI S+F +P VL TN+
Sbjct: 202 TVIEIIQNLDQTPIKKRNELKKSIQSVFHFHFPNEPKVLPMDTND 246
>UNIPROTKB|Q61WR2 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:HE600920
RefSeq:XP_002630359.1 STRING:Q61WR2 EnsemblMetazoa:CBG04291
GeneID:8571874 KEGG:cbr:CBG04291 CTD:8571874 WormBase:CBG04291
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
Uniprot:Q61WR2
Length = 788
Score = 114 (45.2 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 48/210 (22%), Positives = 96/210 (45%)
Query: 664 NDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-VL 722
ND+D + + F G + + I +VP ++E + +++ + E+ + + VL
Sbjct: 517 NDVDAGDAVIDKKFN-GVFASVYIENVPVSVMEAYKETKNLVLFQLLPHEQKMSILNMVL 575
Query: 723 KTRD----PI-------ILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGP 771
K PI I +G+R+F+ V + ++ ++ P +A + P
Sbjct: 576 KKHPSCTVPIGSEDQKFIFYVGFRQFEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAP 635
Query: 772 LA-PPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIK 830
+ P T + Q+ Q + AT VL+ N + + K+ L G+P KI ++ +++
Sbjct: 636 ITFNPATVLCFRQDDKGRQ---ELVATGSVLDTNPDRIVLKRTVLSGHPYKINRRAVVVR 692
Query: 831 DMFTSDLEVAQCEGKEVRTVSGIRGQVKKA 860
MF + ++ + E+ T SG RG +K+A
Sbjct: 693 YMFFNREDIDWFKPVELYTPSGRRGHIKEA 722
Score = 105 (42.0 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 42/202 (20%), Positives = 80/202 (39%)
Query: 119 KRRLQFVECPND-INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R+ F+ + ++ ++D + +D+ L S + L + + GLP ++ V+
Sbjct: 129 KSRISFLTPDKENVDSVLDAIRASDVLCFLWPLSAELSEWDEQLLTICKAAGLPTIVSVV 188
Query: 178 THLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
L G E +G++ ++ L ++ K
Sbjct: 189 PGLGGIQNHKKKEDVRK------GIEFTISKWSMSNAGVMPADSVTDNL-QLLRTLNETK 241
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
L+ + H Y+LV+ E PE ++K + GYLRG +H+ G G
Sbjct: 242 KKPLTLQARHSYMLVENLEATESPED---SSKI--TLKAQGYLRGPEWNANNLIHLPGFG 296
Query: 298 DYSLAGVTGLADPCPLPSAAKK 319
D+ ++ + ADP PL ++ K
Sbjct: 297 DFQISKIETAADPHPLKTSPPK 318
Score = 42 (19.8 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 571 EGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDE 628
+ +D +D D ED++ E+ + +D+ + + A E ++ EIDE
Sbjct: 379 DSEDDEDEEDED-EDMDDEEEDKDLEEDDEEEDTPMDLKSEAGETTASEMMFHDEIDE 435
>POMBASE|SPAC23H4.15 [details] [associations]
symbol:SPAC23H4.15 "ribosome biogenesis protein Tsr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISO]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 PomBase:SPAC23H4.15
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GO:GO:0043021
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:T38313
RefSeq:NP_593391.1 STRING:O13956 EnsemblFungi:SPAC23H4.15.1
GeneID:2541779 KEGG:spo:SPAC23H4.15 OrthoDB:EOG4BS0TS
NextBio:20802869 Uniprot:O13956
Length = 783
Score = 148 (57.2 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 81/348 (23%), Positives = 144/348 (41%)
Query: 569 NSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKISLRKEIDE 628
+ E + DDA S F DL E+ + + + ++ E E E L+ L +E +
Sbjct: 432 SDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELARERFK 491
Query: 629 K-DGAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDL-DEVTRLELEG-FRTGTYLRL 685
K G + + D E E+R+ +L ++ + G + G + +
Sbjct: 492 KYRGLRSLYTSQWDADEYDP-NEPREWRQLFKFENYRNLKNKFLKQPFIGEAKPGKAVYV 550
Query: 686 GIHDVPFEMVEYFDPCHPVLVGGIGLGEEN---VG---------YMQVLKTRDPIILSIG 733
+ +VP E+ EY++ +LV L EN V Y + +++++ ++L IG
Sbjct: 551 ELRNVPIEIFEYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPIESKEELLLQIG 610
Query: 734 WRRFQTIPVYAIEDRNGWHRML----KYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQ 789
RRF P+Y+ +G L +Y P +A P+ ++ + S+N
Sbjct: 611 PRRFMVRPLYSDPTASGASNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIMFKKSSDN- 669
Query: 790 ASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRT 849
S R+ AT + + I K+ L G+P K+ KK I+ MF + +V + ++ T
Sbjct: 670 -SLRLAATGSYVNCDTNSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIWFKPIQLFT 728
Query: 850 VSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
G G +K E +G G + TF +I + D V M
Sbjct: 729 KQGRTGYIK----EPLGTH----------GYFKATFNGKITVQDTVAM 762
Score = 58 (25.5 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 224 KDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGC 283
+D N+ + + WR S Y+L + + +N N+ + G +RG
Sbjct: 228 QDALNVMRALCTSHPRGIHWRDSRSYLL---------SQEISYSNG---NLLVRGIVRGK 275
Query: 284 NLKKGTKVHIAGAGDYSL 301
L +HI G GD+++
Sbjct: 276 GLDPNRLIHIQGFGDFAI 293
Score = 51 (23.0 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 113 TVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETF-EFL-NLMQNHGL 170
T + K+ L F+ + +ID K +D + ++ A E++ F E + Q G+
Sbjct: 124 TTIDRFKQNLLFLLPKREFYSLIDACKVSDYVIFVLSAVQ--EVDEFGELIVRTTQGQGI 181
Query: 171 PNVMGVLTHL 180
+V+ ++ L
Sbjct: 182 SSVLSMVHDL 191
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 366 TLVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGT 425
T+ + QN + + K+ S+I V+ + +++D+ E I + +G
Sbjct: 125 TIDRFKQNLLFLLPKREFYSLIDACKVSDYVIF-VLSAVQEVDEFGELI--VRTTQGQGI 181
Query: 426 SNGLGEKHVAEEMESLHEDADVKK 449
S+ L H E++SL +VKK
Sbjct: 182 SSVLSMVHDLSEVDSLKTRNEVKK 205
>GENEDB_PFALCIPARUM|PF14_0494 [details] [associations]
symbol:PF14_0494 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AE014187 InterPro:IPR007034
Pfam:PF04950 KO:K14799 RefSeq:XP_001348668.1
ProteinModelPortal:Q8IKV7 IntAct:Q8IKV7 MINT:MINT-1637214
EnsemblProtists:PF14_0494:mRNA GeneID:812076 KEGG:pfa:PF14_0494
EuPathDB:PlasmoDB:PF3D7_1451900 HOGENOM:HOG000282050
ProtClustDB:CLSZ2501080 Uniprot:Q8IKV7
Length = 1029
Score = 124 (48.7 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 48/193 (24%), Positives = 82/193 (42%)
Query: 118 KKRRLQFV--ECPNDINGMIDCAKFADLALLLI-DAS---HGFEMETFEFLNLMQNHGLP 171
KK+R FV + P DI G+ID K AD+ L L D S F+ ++ L++++ G+P
Sbjct: 130 KKKRKSFVVYDIPRDIYGIIDGTKCADVVLCLFKDGSIENSCFDELGYKLLSVLKIQGVP 189
Query: 172 NVMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAE 231
+++G+ F +E K+F +S + K D L
Sbjct: 190 SIIGI-----GYNTNMSNKGSHKFVMRYFNSEFTMDDKIFFIS---ENK--NSDFQKLYN 239
Query: 232 FISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKV 291
I+ MK ++S+R Y++ D + N C + I G+++G +
Sbjct: 240 EITNMKIKNVSYREGRGYMMADSCA-------YNSENDC---IYIKGFIKGVGFNYHNPI 289
Query: 292 HIAGAGDYSLAGV 304
HI GDY + +
Sbjct: 290 HITDVGDYYIDNI 302
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 784 NFSNNQASFR--ITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 841
NFSN QA+ I A V+ + + I K+I L G KI KK A+I++MF + ++
Sbjct: 887 NFSNPQANVASVIVAHGKVVSCDCKRIIMKRISLCGKIFKIHKKKAVIRNMFYNPKDINY 946
Query: 842 CEGKEVRTVSGIRGQVKKAAKEEIGNQPKRK 872
+ E+ T G+ G++ E +G K K
Sbjct: 947 FKPVELHTKHGLTGKIV----ESLGTHGKMK 973
Score = 42 (19.8 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 563 NQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKI 620
N S N ++++++++ D T + + +N+G N NE + + +K I
Sbjct: 409 NFFSYDNYNINENNNSITKTMNDSTTTTNNSNNNNNNNGDNI--NESYTVYKYNMKNI 464
Score = 42 (19.8 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 353 HFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSII-----SLFSQKPNVLSDATNNAKDM 407
H +Y + L+ L+ ++ ++ L S + S+ +L+ +NN K
Sbjct: 290 HITDVGDYYIDNIYLIDILKEKRFFDEQNLRYSFLLNPNNQQTSENEFILNFLSNNKKLP 349
Query: 408 DDDTEY 413
+D T+Y
Sbjct: 350 NDHTKY 355
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 718 YMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMH 763
Y ++++D + G+R F PV++ + G KY H
Sbjct: 741 YSDKVESKDIFEIICGFRHFIGCPVFSEQIIKGPQSKGKYEKHLKH 786
>UNIPROTKB|Q8IKV7 [details] [associations]
symbol:PF14_0494 "Ribosome biogenesis protein tsr1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AE014187 InterPro:IPR007034
Pfam:PF04950 KO:K14799 RefSeq:XP_001348668.1
ProteinModelPortal:Q8IKV7 IntAct:Q8IKV7 MINT:MINT-1637214
EnsemblProtists:PF14_0494:mRNA GeneID:812076 KEGG:pfa:PF14_0494
EuPathDB:PlasmoDB:PF3D7_1451900 HOGENOM:HOG000282050
ProtClustDB:CLSZ2501080 Uniprot:Q8IKV7
Length = 1029
Score = 124 (48.7 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 48/193 (24%), Positives = 82/193 (42%)
Query: 118 KKRRLQFV--ECPNDINGMIDCAKFADLALLLI-DAS---HGFEMETFEFLNLMQNHGLP 171
KK+R FV + P DI G+ID K AD+ L L D S F+ ++ L++++ G+P
Sbjct: 130 KKKRKSFVVYDIPRDIYGIIDGTKCADVVLCLFKDGSIENSCFDELGYKLLSVLKIQGVP 189
Query: 172 NVMGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAE 231
+++G+ F +E K+F +S + K D L
Sbjct: 190 SIIGI-----GYNTNMSNKGSHKFVMRYFNSEFTMDDKIFFIS---ENK--NSDFQKLYN 239
Query: 232 FISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKV 291
I+ MK ++S+R Y++ D + N C + I G+++G +
Sbjct: 240 EITNMKIKNVSYREGRGYMMADSCA-------YNSENDC---IYIKGFIKGVGFNYHNPI 289
Query: 292 HIAGAGDYSLAGV 304
HI GDY + +
Sbjct: 290 HITDVGDYYIDNI 302
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 784 NFSNNQASFR--ITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 841
NFSN QA+ I A V+ + + I K+I L G KI KK A+I++MF + ++
Sbjct: 887 NFSNPQANVASVIVAHGKVVSCDCKRIIMKRISLCGKIFKIHKKKAVIRNMFYNPKDINY 946
Query: 842 CEGKEVRTVSGIRGQVKKAAKEEIGNQPKRK 872
+ E+ T G+ G++ E +G K K
Sbjct: 947 FKPVELHTKHGLTGKIV----ESLGTHGKMK 973
Score = 42 (19.8 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 563 NQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYESAVERRLKKI 620
N S N ++++++++ D T + + +N+G N NE + + +K I
Sbjct: 409 NFFSYDNYNINENNNSITKTMNDSTTTTNNSNNNNNNNGDNI--NESYTVYKYNMKNI 464
Score = 42 (19.8 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 353 HFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEKSII-----SLFSQKPNVLSDATNNAKDM 407
H +Y + L+ L+ ++ ++ L S + S+ +L+ +NN K
Sbjct: 290 HITDVGDYYIDNIYLIDILKEKRFFDEQNLRYSFLLNPNNQQTSENEFILNFLSNNKKLP 349
Query: 408 DDDTEY 413
+D T+Y
Sbjct: 350 NDHTKY 355
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(5) = 2.7e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 718 YMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMH 763
Y ++++D + G+R F PV++ + G KY H
Sbjct: 741 YSDKVESKDIFEIICGFRHFIGCPVFSEQIIKGPQSKGKYEKHLKH 786
>ASPGD|ASPL0000007982 [details] [associations]
symbol:AN6266 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0005634 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP OrthoDB:EOG4BS0TS RefSeq:XP_663870.1
STRING:Q5AZL4 EnsemblFungi:CADANIAT00006724 GeneID:2871002
KEGG:ani:AN6266.2 Uniprot:Q5AZL4
Length = 810
Score = 100 (40.3 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 51/203 (25%), Positives = 84/203 (41%)
Query: 222 TKKDIGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR 281
++++ N + + WR ++L+ EDV PE + + D +V + G +R
Sbjct: 231 SRQECSNAIRSLCTATPKGIRWRDDRSWMLI---EDVKWPESA--SPEVD-DVVLTGVVR 284
Query: 282 GCNLKKGTKVHIAGAGDYSLAGVTGLADPCPLPSAAKKK----GLRDKE--KLFYAPMSG 335
G LK VH+ G GD+ + +T PLP+A K+ + + E +L +P +
Sbjct: 285 GKGLKADRLVHVPGWGDFQIDSITA----APLPTARSKRDDAMNVDESEAPQLLDSPSAD 340
Query: 336 LGDLLYDKDAVYIDINDHFVQFSEYQDVGVTLVK----SLQNTKYPID-KKLEKSIISLF 390
DL I++ D + GV L S + P K+L K
Sbjct: 341 RDDLATVAPEE-IEMEDDIESMPDTDRKGVLLDDHHYFSDDDDHIPAKPKRLPKGTSEY- 398
Query: 391 SQKPNVLSDATNNAKD-MDDDTE 412
Q L D +++ D MDDD E
Sbjct: 399 -QSHWFLDDVSDSGSDVMDDDDE 420
Score = 71 (30.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 32/179 (17%), Positives = 69/179 (38%)
Query: 6 HKAHRARQSGSSA-KKISKSEINKQDK-KKPNPKAFGFASSVKAKRSMMRTAEKEQRRLH 63
HK +++ + A K +K ++ + ++ + P + + ++ + K+Q R
Sbjct: 19 HKPYKSGHASKRALKDQAKGKVERAERGTRKTPHQQLMSKLDRRNQARQKQQNKQQERAQ 78
Query: 64 IPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCLIKHY--TKLKVPEVRGPVTVVSGKKRR 121
+I + +IK L + T P+ V + ++
Sbjct: 79 AISIFSGQNGAPRHVAIVPLSIDIDTTAIIKALNESVDVTSDVFPDTISRVRI-DRFRQN 137
Query: 122 LQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
LQ++ D+ +D + AD +L I A E + L ++ G+ NV+ V+ L
Sbjct: 138 LQYIPAKYDLMSALDACRMADFVVLAISAHLEVEEQGELLLRSIEGQGVSNVIAVVQGL 196
Score = 64 (27.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 773 APPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDM 832
AP T V FS + + + T V+ + + K+ + G+P KI K+ ++ M
Sbjct: 686 APESTTAVG---FSTS--TLELIGTGTVVAPDPTRVVAKRAIITGHPYKIHKRVVTVRYM 740
Query: 833 FTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMS 892
F + +V + ++ T G G +K E +G G +CTF+ +I
Sbjct: 741 FFNAEDVNWFKALQLWTRRGRSGFIK----ESLGTH----------GYFKCTFDGKINPQ 786
Query: 893 DVV 895
D V
Sbjct: 787 DSV 789
Score = 58 (25.5 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 715 NVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDR--NGWHRMLKYTPEHMHCLAMFWGPL 772
N + +K++ +I+ G RR PV++ D N H+ ++ +A + GPL
Sbjct: 600 NAAVEEPIKSKQELIVQYGPRRLIVNPVFSSADNTPNNVHKFDRFLHPGRSAVATWIGPL 659
Query: 773 APPQTGVVAIQNFSNNQAS 791
G V + F + + S
Sbjct: 660 T---WGSVPVLVFKSRKTS 675
>SGD|S000002218 [details] [associations]
symbol:TSR1 "Protein required for processing of 20S pre-rRNA
in the cytoplasm" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA;IDA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
SGD:S000002218 GO:GO:0005737 GO:GO:0005730 EMBL:BK006938
GO:GO:0043021 GO:GO:0030686 GO:GO:0006364 InterPro:IPR007034
Pfam:PF04950 EMBL:U53668 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
OrthoDB:EOG4BS0TS EMBL:Z74108 PIR:S67595 RefSeq:NP_010223.1
ProteinModelPortal:Q07381 DIP:DIP-6294N IntAct:Q07381
MINT:MINT-616207 STRING:Q07381 PaxDb:Q07381 PeptideAtlas:Q07381
EnsemblFungi:YDL060W GeneID:851499 KEGG:sce:YDL060W CYGD:YDL060w
NextBio:968840 Genevestigator:Q07381 GermOnline:YDL060W
Uniprot:Q07381
Length = 788
Score = 95 (38.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 78/367 (21%), Positives = 143/367 (38%)
Query: 561 QRNQVSKGNSEGDDSD----DAVSGDFEDLETVEKHQGHIKDNSGSNAIENE-YESAVER 615
Q N+ G+ E D D + +S + E+ + E +D + IE E ESA+ER
Sbjct: 438 QDNEEVAGDEEYDIEDNEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIER 497
Query: 616 RLKKISLRK------EIDEKD-GAKFHCGQPNEIGLVDKMKEEIEFRKQMNIAELNDLDE 668
+ L+ ++DEKD + + IG K I ++ N A+ D
Sbjct: 498 LKRYRGLKNLYNCDWQVDEKDPSSPAEWKRLLRIGNYKNTKNRI-IKETKNEAQAIAGDR 556
Query: 669 VTRLELEGFRTGTYLRLGIHD---VPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTR 725
+ R+ + R +L I D + F + H V L + Y + + ++
Sbjct: 557 I-RMFI---RFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFSL-QRWEQYDKPVPSQ 611
Query: 726 DPIILSIGWRRFQTIPVYA--IEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQ 783
+PI++ G RR+ P+++ N H+ ++ +A P+ Q+ + +
Sbjct: 612 EPIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPVDFTQSPAIFFK 671
Query: 784 NFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCE 843
+ + + L +H + K+ L G+P + K ++ MF +V +
Sbjct: 672 PSPTDAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYMFFRPEDVEWFK 731
Query: 844 GKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM----RG 899
+ T SG G +K E +G G + TF+ ++ DVV M R
Sbjct: 732 SIPLFTKSGRSGFIK----ESLGTH----------GYFKATFDGKLSAQDVVAMSLYKRM 777
Query: 900 WADVEIP 906
W +P
Sbjct: 778 WPMPSLP 784
Score = 90 (36.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 66/333 (19%), Positives = 129/333 (38%)
Query: 6 HKAHRARQSGSSA-KKISKSEINKQD--KKKPNPKAFGFASSVKAKR-SMMRTAEK-EQR 60
HK+++++ + A K++ K ++ K+ KP+ + KAK+ R + E R
Sbjct: 14 HKSYKSKHASKGALKRLYKGKVEKEPVGTGKPDKQVSKLQRKNKAKQLRAQRILDSIENR 73
Query: 61 RLHIPTIDRSYGEXXXXXXXXXXXXXXXKSLLIKCL-IKHYTKLKVPEVRGP-VTVVSGK 118
+L + G +L K L + V EV + V K
Sbjct: 74 KL----FEGKNGAAKIITIVPLVNDLDPLDILYKLLKCADDEGIMVQEVDSKRIFNVHIK 129
Query: 119 KRR--LQFV--ECPNDINGMIDCAKFADLALLLIDASHGFEMETFE-FLNLMQNHGLPNV 173
K + L+ + + N +N ++DCAK AD + + + E E + ++ G+ +
Sbjct: 130 KFKSNLKIIIPDMTNFLN-ILDCAKVADFVVFGLSGVQEVDEEFGEQIIRALELQGIASY 188
Query: 174 MGVLTHLXXXXXXXXXXXXXXXXXXXFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFI 233
+GV+++L + H F + D N+ +
Sbjct: 189 IGVISNLSAVHEKEKFQLDVKQSLESY---FKH---FFPSEERVYNLEKNSDALNVLRTL 242
Query: 234 SVMKFHSLSWRTSHPYILVDRFEDV-TPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVH 292
S++WR + Y++ D + V T P+ ++ I G +RG VH
Sbjct: 243 CQRLPRSINWRDNRGYVVADFVDFVETSPD--------SGDLVIEGTVRGIGFNANRLVH 294
Query: 293 IAGAGDYSLAGVTGLADPCPLPSAAKKKGLRDK 325
I GD+ L + +++ S+ K+K +++K
Sbjct: 295 IPDFGDFQLNKIEKISE-----SSQKRKIIKEK 322
>CGD|CAL0002141 [details] [associations]
symbol:TSR1 species:5476 "Candida albicans" [GO:0043021
"ribonucleoprotein complex binding" evidence=IGI] [GO:0006364 "rRNA
processing" evidence=IGI] [GO:0030686 "90S preribosome"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IGI] [GO:0005730
"nucleolus" evidence=IGI] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 CGD:CAL0002141 GO:GO:0005737 GO:GO:0005730
EMBL:AACQ01000073 EMBL:AACQ01000072 GO:GO:0043021 GO:GO:0030686
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 InterPro:IPR009000
SUPFAM:SSF50447 eggNOG:COG5177 KO:K14799 RefSeq:XP_716172.1
RefSeq:XP_716255.1 ProteinModelPortal:Q5A346 STRING:Q5A346
GeneID:3642135 GeneID:3642187 KEGG:cal:CaO19.13775
KEGG:cal:CaO19.6417 Uniprot:Q5A346
Length = 842
Score = 102 (41.0 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 129 NDINGMIDCAKFADLALLLIDASHGFEMETF--EFLNLMQNHGLPNVMGVLTHLXXXXXX 186
N++ ++D A+ +D LL I A+ +F L + G+ +GVL ++
Sbjct: 147 NNMISILDAAQVSDFVLLGISATEEIGENSFGETVLRALIAQGISTTIGVLPNIVSAYPK 206
Query: 187 XXXXXXXXXXXXXFGTELY--HGAKLFKLSGLIQGK---YTKK---DIGNLAEFISVMKF 238
F + + SG G Y+ + D N I KF
Sbjct: 207 RNLQLDVKQSLQSFYHHFFPSRDGSSNRGSGTDSGGNKLYSLELDSDNSNCLRIIC-QKF 265
Query: 239 -HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
S++WR S +++ D+ E + P + V N+ + + + G +RG VH+ G G
Sbjct: 266 PQSITWRDSRGWLVADKVE-IFNPNGMPVENQ-QQMMVVEGMVRGVGFNVNRLVHLPGLG 323
Query: 298 DYSLAGVTGLADPCPLPSAAKKKGLRD 324
D+ L + LA S+ +G D
Sbjct: 324 DFQLHKLEKLARKARGNSSRNHRGGMD 350
Score = 67 (28.6 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 48/227 (21%), Positives = 93/227 (40%)
Query: 690 VPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDPIILSIGWRRFQTIPVY--AIED 747
VPF + E + H + V E Y + + ++ II+ G RR P+Y A +
Sbjct: 617 VPFPVYELLEHEHKLGVCNFSF-EAWQDYEKPIINKEQIIVQYGPRRQIIQPLYNQANNN 675
Query: 748 RNGWHRMLKYTPEHMH----CLAMFWGPLAPPQTGVV-------AIQNFSNNQASFRITA 796
N H++ + + +A P+ + + A + ++N S
Sbjct: 676 PNNVHKLENFVHHNQGGGGAIIATAITPVLFTNSPTLFFKIHPDADDSSNSNGGSVEFVG 735
Query: 797 TAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQ 856
L + + + +++ L G+P KI K+ I+ MF + ++ + + T + G+
Sbjct: 736 KGTYLGSDAKRIMVQRVVLTGHPIKIHKRVVTIRYMFFNREDINYFKAVSLFTKNS--GR 793
Query: 857 VKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADV 903
V KE +G K +G + T +D + MS ++ R W +V
Sbjct: 794 VG-FIKESLGTHGYFKANF--DG--KLTSQDVVAMS--LYKRSWPEV 833
Score = 61 (26.5 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 554 GDWSKAAQRNQVSKGNSEGDDS---DDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYE 610
G S + + V +G SE DD + D DLE E+ +G ++ +N ++++
Sbjct: 415 GTSSSSTGKKLVPRGTSEYQGRWFVDDVLDEDASDLE--EQREGEGEEEEDANIVDDDM- 471
Query: 611 SAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKM----KEEIEFRKQMNIAELNDL 666
VE ++ + I + + E +++ K+++EF ++ EL+
Sbjct: 472 -MVEDNMEADDITDSIHDSEMMHVDLSPEEESRQLEEYRSLAKDDLEFPDEI---ELHPN 527
Query: 667 DEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLV 706
+ L+GFR G LG D ++ EY DP P ++
Sbjct: 528 ESAIE-RLKGFR-GVK-SLGNCDWDYD--EY-DPEAPSIL 561
>UNIPROTKB|Q5A346 [details] [associations]
symbol:tsr1 "Putative uncharacterized protein TSR1"
species:237561 "Candida albicans SC5314" [GO:0005730 "nucleolus"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IGI] [GO:0006364
"rRNA processing" evidence=IGI] [GO:0030686 "90S preribosome"
evidence=IGI] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IGI] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
CGD:CAL0002141 GO:GO:0005737 GO:GO:0005730 EMBL:AACQ01000073
EMBL:AACQ01000072 GO:GO:0043021 GO:GO:0030686 GO:GO:0006364
InterPro:IPR007034 Pfam:PF04950 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG5177 KO:K14799 RefSeq:XP_716172.1 RefSeq:XP_716255.1
ProteinModelPortal:Q5A346 STRING:Q5A346 GeneID:3642135
GeneID:3642187 KEGG:cal:CaO19.13775 KEGG:cal:CaO19.6417
Uniprot:Q5A346
Length = 842
Score = 102 (41.0 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 129 NDINGMIDCAKFADLALLLIDASHGFEMETF--EFLNLMQNHGLPNVMGVLTHLXXXXXX 186
N++ ++D A+ +D LL I A+ +F L + G+ +GVL ++
Sbjct: 147 NNMISILDAAQVSDFVLLGISATEEIGENSFGETVLRALIAQGISTTIGVLPNIVSAYPK 206
Query: 187 XXXXXXXXXXXXXFGTELY--HGAKLFKLSGLIQGK---YTKK---DIGNLAEFISVMKF 238
F + + SG G Y+ + D N I KF
Sbjct: 207 RNLQLDVKQSLQSFYHHFFPSRDGSSNRGSGTDSGGNKLYSLELDSDNSNCLRIIC-QKF 265
Query: 239 -HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
S++WR S +++ D+ E + P + V N+ + + + G +RG VH+ G G
Sbjct: 266 PQSITWRDSRGWLVADKVE-IFNPNGMPVENQ-QQMMVVEGMVRGVGFNVNRLVHLPGLG 323
Query: 298 DYSLAGVTGLADPCPLPSAAKKKGLRD 324
D+ L + LA S+ +G D
Sbjct: 324 DFQLHKLEKLARKARGNSSRNHRGGMD 350
Score = 67 (28.6 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 48/227 (21%), Positives = 93/227 (40%)
Query: 690 VPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDPIILSIGWRRFQTIPVY--AIED 747
VPF + E + H + V E Y + + ++ II+ G RR P+Y A +
Sbjct: 617 VPFPVYELLEHEHKLGVCNFSF-EAWQDYEKPIINKEQIIVQYGPRRQIIQPLYNQANNN 675
Query: 748 RNGWHRMLKYTPEHMH----CLAMFWGPLAPPQTGVV-------AIQNFSNNQASFRITA 796
N H++ + + +A P+ + + A + ++N S
Sbjct: 676 PNNVHKLENFVHHNQGGGGAIIATAITPVLFTNSPTLFFKIHPDADDSSNSNGGSVEFVG 735
Query: 797 TAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQ 856
L + + + +++ L G+P KI K+ I+ MF + ++ + + T + G+
Sbjct: 736 KGTYLGSDAKRIMVQRVVLTGHPIKIHKRVVTIRYMFFNREDINYFKAVSLFTKNS--GR 793
Query: 857 VKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADV 903
V KE +G K +G + T +D + MS ++ R W +V
Sbjct: 794 VG-FIKESLGTHGYFKANF--DG--KLTSQDVVAMS--LYKRSWPEV 833
Score = 61 (26.5 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 554 GDWSKAAQRNQVSKGNSEGDDS---DDAVSGDFEDLETVEKHQGHIKDNSGSNAIENEYE 610
G S + + V +G SE DD + D DLE E+ +G ++ +N ++++
Sbjct: 415 GTSSSSTGKKLVPRGTSEYQGRWFVDDVLDEDASDLE--EQREGEGEEEEDANIVDDDM- 471
Query: 611 SAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKM----KEEIEFRKQMNIAELNDL 666
VE ++ + I + + E +++ K+++EF ++ EL+
Sbjct: 472 -MVEDNMEADDITDSIHDSEMMHVDLSPEEESRQLEEYRSLAKDDLEFPDEI---ELHPN 527
Query: 667 DEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLV 706
+ L+GFR G LG D ++ EY DP P ++
Sbjct: 528 ESAIE-RLKGFR-GVK-SLGNCDWDYD--EY-DPEAPSIL 561
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1068 989 0.00099 122 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 624 (66 KB)
Total size of DFA: 449 KB (2213 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.75u 0.16s 91.91t Elapsed: 00:00:06
Total cpu time: 91.77u 0.16s 91.93t Elapsed: 00:00:06
Start: Mon May 20 21:31:38 2013 End: Mon May 20 21:31:44 2013