BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046721
(1068 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bms1 PE=1 SV=2
Length = 1121
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1139 (38%), Positives = 623/1139 (54%), Gaps = 124/1139 (10%)
Query: 7 KAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPT 66
K H A+ SG A+K +++ NPKAF AS+ + R MRTA+ Q++LH+P
Sbjct: 5 KGHYAKHSGPKAEKKKLKKVSDGSASN-NPKAFAVASAGRMARQAMRTADISQKKLHVPM 63
Query: 67 IDRSYGE-PPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFV 125
+DR+ E PPP +V V GPP GKS LIK L++ Y+K + ++ GP+TVV+GKKRR+ F+
Sbjct: 64 VDRTPDEAPPPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFL 123
Query: 126 ECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTD 185
ECPND++ MID AK ADL LLLIDA+ GFEMET EFLN++ HG+P +MGVLTHLD F
Sbjct: 124 ECPNDLSSMIDVAKIADLVLLLIDANFGFEMETMEFLNILAPHGMPRIMGVLTHLDLFKK 183
Query: 186 KKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRT 245
LR+ K+ LKHRF TELY GAKLF LSG++ G+Y ++I NL+ FISVMKF L WR
Sbjct: 184 TSTLREAKKRLKHRFWTELYQGAKLFYLSGVLNGRYPDREILNLSRFISVMKFRPLRWRN 243
Query: 246 SHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNL-KKGTKVHIAGAGDYSLAGV 304
HPY+L DR ED+T P + N K R + +YGYL G NL K VHI G GD+ + V
Sbjct: 244 QHPYLLADRMEDLTLPVDIEQNPKVGRKITLYGYLHGTNLPKHDASVHIPGVGDFVTSDV 303
Query: 305 TGLADPCPLPSAAK--KKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHFVQFSEYQD 362
+ L DPCP P A K ++ L +K+KL Y PM+ +G +L+DKD VYI++ E +
Sbjct: 304 SSLEDPCPPPDADKVRRRRLSEKQKLIYGPMADIGGILFDKDRVYIEVPTSNFSKDENSE 363
Query: 363 VGV--TLVKSLQNTKYP------------------------------IDKKLEKSIISLF 390
G +V LQ + P + +K + L
Sbjct: 364 AGFGERMVMQLQEAQQPLGVDGNSGLQLFSNSDAIDTVDRESSEIDNVGRKTRRQPTGLI 423
Query: 391 SQK-----PNVLSDATNNAKDMDDDTEYIHGKQYQTREGTSNGLGEKHVAEEMESLHEDA 445
+Q+ D+ N+ D ++D ++ G + + ++ E D+
Sbjct: 424 NQELIKEDEGAFDDSDVNSADENEDVDFT---------GKIGAINNEDESDNEEVAFADS 474
Query: 446 DVKKGEKF----------------SALAFKKSFGQCTNLIQLVYGKSTPTSATLSKEVQD 489
D G +F +ALA+ +S + N+ ++ Y +S ++ +
Sbjct: 475 DSDLGGQFDDEDSNLRWKEGLASKAALAYSQSGKRRRNIQKIFYDESLSPKDAYAEYKGE 534
Query: 490 SSDSEESD----DDE--FFRPKVEGNKKLREVLDGRLFNMDECSKFNSYGDLKSSKGEEV 543
S+ S ESD DDE FF+ N+ + N ++ + S K + ++
Sbjct: 535 SAKSSESDLVVSDDEEDFFKVSKVANESISS-------NHEKLMESESDRLSKKWENPQL 587
Query: 544 YESIRDRFVTGDWSKAAQ-RNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGH-IKDNSG 601
++ RF+TG + + + +VS+ + E GDFEDLE E + ++++SG
Sbjct: 588 LAQLKSRFITGSLLDSIEGQEEVSQDDEE---------GDFEDLEDEENSSDNEMEESSG 638
Query: 602 SNAIENEYESAVERRLK----KISLRKEIDEKDGAKFHCGQPN--EIGLVDKMKEEIEFR 655
S+ ESA E + + + +KE + G P ++ + KE+I +
Sbjct: 639 SSVTAENEESADEVDFQTEREENARKKEELRLRFEEEDRGDPEKKDVDWYTEEKEKIARQ 698
Query: 656 KQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEEN 715
+N D+D +R E+EG+R GTY+R+ I+DVPFE VE+FD +PV+VGG+ E+
Sbjct: 699 LVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHFDSRYPVVVGGLLPNEQR 758
Query: 716 VGYMQV-----------LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHC 764
G +QV LKT DP+I S+GWRRFQ+IPVY+I D +RMLKYTPEHMHC
Sbjct: 759 YGLVQVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHC 818
Query: 765 LAMFWGPLAPPQTGVVAIQNFSNNQA---SFRITATAVVLEFNHEVKIKKKIKLVGYPCK 821
F+GP P +G A+Q+ +N+ A SFRI AT VL + I KK+KL G P K
Sbjct: 819 FGTFYGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVLNIDQSTDIVKKLKLTGVPYK 878
Query: 822 IFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIA 881
IFK TA IK MF+S LEVA+ EG +RTVSGIRGQVKKA +E G+
Sbjct: 879 IFKNTAFIKKMFSSPLEVAKFEGANIRTVSGIRGQVKKAVDQEHGH-------------F 925
Query: 882 RCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGMKTIAELRREHNLSIP 941
R TFED+ILMSD+VF+R W V++ +F +T ++ W GM+ E+R E L P
Sbjct: 926 RATFEDKILMSDIVFLRAWYPVQVRKFCTMVTNLLETDKTEWNGMRLTGEVRHELGLKTP 985
Query: 942 VNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSRAVVMEPQER 1001
+ +S Y+ I R R FNPL +P SLQA LPF S+ K + R + R V++ +ER
Sbjct: 986 LRPNSQYQEIVRPSRHFNPLKVPASLQAQLPFNSRQKALRPRSKPTYMQKRTVLLNAEER 1045
Query: 1002 KVHALIQHLKLIRNEKMKKRKLKEARKRNEVEAERAKDKQLTRKRQRGERQERYREQDK 1060
KV L+Q + + +K KRK K+A + K++Q +++R E+ E + + K
Sbjct: 1046 KVRDLLQKVMTLHTDKEAKRKAKKAAEHERYHKRMQKEEQAYIEKKREEKAEWFAQHGK 1104
>sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1
PE=1 SV=1
Length = 1282
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/412 (53%), Positives = 292/412 (70%), Gaps = 13/412 (3%)
Query: 1 MEQQPHKAHRARQSGSSAKKISKSEI------NKQDKKKPNPKAFGFASSVKAKRSMMRT 54
ME + K HR + SG A K K + +++D +K NPKAF S+V+ RS RT
Sbjct: 1 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT 60
Query: 55 AEKEQRRLHIPTIDRSYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTV 114
+ + ++ HIP +DR+ EPPP VVVV GPP+VGKS LI+CLI+++T+ K+ E+RGPVT+
Sbjct: 61 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI 120
Query: 115 VSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
VSGKKRRL +EC DIN MID AK ADL L+LIDAS GFEMETFEFLN+ Q HG P +M
Sbjct: 121 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM 180
Query: 175 GVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
GVLTHLD F K+L+KTK+ LKHRF TE+Y GAKLF LSG++ G+Y ++I NL FI+
Sbjct: 181 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT 240
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
VMKF L+W+TSHPYIL DR ED+T PE + N KCDR V++YGYLRG +LK +++H+
Sbjct: 241 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP 300
Query: 295 GAGDYSLAGVTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIDINDHF 354
G GD++++ ++ L DPC LP KK+ L +KEKL YAP+SG+G +LYDKDAVY+D+
Sbjct: 301 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH 360
Query: 355 VQFSEYQD-VGVT--LVKSLQNTKYPIDKKLEKSIISLFSQKPNVLSDATNN 403
V +QD VG T LV+SL +T ID K+ S ++LFS + S+ +N
Sbjct: 361 V----FQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDN 408
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/505 (46%), Positives = 310/505 (61%), Gaps = 49/505 (9%)
Query: 541 EEVYESIRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLETVEKHQGHIKDNS 600
EEV SIRD FVTG W +V D+ + GDFEDLET + H+G N+
Sbjct: 748 EEVMNSIRDCFVTGKWEDDKDAAKVLA-------EDEELYGDFEDLETGDVHKGKSGPNT 800
Query: 601 GSNAIE---------NEYESAVERRLKKISLRKEIDEKDGAKFHCGQPNEIGLVDKMKEE 651
+ IE +E ESA ++ L K KE+ + A++ G E D +K E
Sbjct: 801 QNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFD---AEYDEG---ESTYFDDLKGE 854
Query: 652 IEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGL 711
++ + Q+N AE D D+ R++ EGFR G Y+R+ I +VP E V+ FDP +P+++GG+G
Sbjct: 855 MQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGN 914
Query: 712 GEENVGYMQ-----------VLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPE 760
E NVGY+Q +LK+RDPII S+GWRRFQTIP+Y IED NG R+LKYTP+
Sbjct: 915 SEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQ 974
Query: 761 HMHCLAMFWGPLAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPC 820
HMHC A FWGP+ P TG +AIQ+ S FRI AT VVL+ + +KI KK+KL G+P
Sbjct: 975 HMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPY 1034
Query: 821 KIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGI 880
KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA + EG
Sbjct: 1035 KIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAP-------------EGA 1081
Query: 881 ARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQP--RDKIWQGMKTIAELRREHNL 938
R +FED++LMSD+VFMR W V IP FYNP+T+ ++P W GM+T +LR H +
Sbjct: 1082 FRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGV 1141
Query: 939 SIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDIPSRKRLFLENSR-AVVME 997
+ NKDSLYK I R+ + FN L IPK+LQ ALPF++KPK ++ + R AV+ E
Sbjct: 1142 RLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIRE 1201
Query: 998 PQERKVHALIQHLKLIRNEKMKKRK 1022
P ERK+ AL+ L + ++KMKK K
Sbjct: 1202 PHERKILALLDALSTVHSQKMKKAK 1226
>sp|Q08965|BMS1_YEAST Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1
Length = 1183
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/462 (44%), Positives = 278/462 (60%), Gaps = 46/462 (9%)
Query: 3 QQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRL 62
+Q +K HR + ++AKK K + N KAF A+ K R+M R+++ +R+L
Sbjct: 2 EQSNKQHRKAKEKNTAKK-------KLHTQGHNAKAFAVAAPGKMARTMQRSSDVNERKL 54
Query: 63 HIPTIDRS-YGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRR 121
H+P +DR+ +PPP++V V GPP GK+ LI+ L++ TK + +++GP+TVVSGK RR
Sbjct: 55 HVPMVDRTPEDDPPPFIVAVVGPPGTGKTTLIRSLVRRMTKSTLNDIQGPITVVSGKHRR 114
Query: 122 LQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
L F+ECP +D+N MID AK ADL LLLID + GFEMET EFLN+ Q+HG+P V+GV THL
Sbjct: 115 LTFLECPADDLNAMIDIAKIADLVLLLIDGNFGFEMETMEFLNIAQHHGMPRVLGVATHL 174
Query: 181 DKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHS 240
D F + LR +K+ LKHRF TE+Y GAKLF LSG+I G+Y ++I NL+ FISVMKF
Sbjct: 175 DLFKSQSTLRASKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRP 234
Query: 241 LSWRTSHPYILVDRFEDVTPPERVHVNN-KCDRNVAIYGYLRGCNLKK--GTKVHIAGAG 297
L WR HPY+L DRF D+T PE + + DR VAIYGYL G L GT+VHIAG G
Sbjct: 235 LKWRNEHPYMLADRFTDLTHPELIETQGLQIDRKVAIYGYLHGTPLPSAPGTRVHIAGVG 294
Query: 298 DYSLAGVTGLADPCPLP----------------------------SAAKKKGLRDKEKLF 329
D+S+A + L DPCP P + ++K L DK+KL
Sbjct: 295 DFSVAQIEKLPDPCPTPFYQQKLDDFEREKMKEEAKANGEITTASTTRRRKRLDDKDKLI 354
Query: 330 YAPMSGLGDLLYDKDAVYIDIND-----HFVQFSEYQDVGVTLVKSLQNTKYPIDKKLEK 384
YAPMS +G +L DKDAVYIDI FV E + G L+ LQ+ + I +K +
Sbjct: 355 YAPMSDVGGVLMDKDAVYIDIGKKNEEPSFVPGQERGE-GEKLMTGLQSVEQSIAEKFDG 413
Query: 385 SIISLFSQKPNVLSDATNNAKDMDDDTEYIHGKQYQTREGTS 426
+ LFS + A + D++ E I + +++ TS
Sbjct: 414 VGLQLFSNGTELHEVADHEGMDVESGEESIEDDEGKSKGRTS 455
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/615 (34%), Positives = 326/615 (53%), Gaps = 77/615 (12%)
Query: 494 EESDDDEFFRPK-----VEGNKKLREVLDGRLFNMDECSKFNSYGDL--KSSKGEEVYES 546
EE DD+FFR K EGNK + + KF Y D K +K + ++
Sbjct: 581 EEDVDDDFFRKKDGTVTKEGNKD----------HAVDLEKFVPYFDTFEKLAKKWKSVDA 630
Query: 547 IRDRFVTGDWSKAAQRNQVSKGNSEGDDSDDAVSGDFEDLET---VEKHQGHIK------ 597
I++RF+ A +K S+ ++ + + GDFEDLE E+ + +
Sbjct: 631 IKERFLG-----AGILGNDNKTKSDSNEGGEELYGDFEDLEDGNPSEQAEDNSDKESEDE 685
Query: 598 ----------DNSGSNAIENEYESAV---ERRL---KKISLRKEIDEKDGAKFHCGQPNE 641
DNS +N E + ER + KK LR + + ++G F N
Sbjct: 686 DENEDTNGDDDNSFTNFDAEEKKDLTMEQEREMNAAKKEKLRAQFEIEEGENFKEDDENN 745
Query: 642 --IGLVDKMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRLGIHDVPFEMVEYFD 699
+ K +I + ++N E ++ R +EGF+ G+Y+R+ VP E V+ F+
Sbjct: 746 EYDTWYELQKAKISKQLEINNIEYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFN 805
Query: 700 PCHPVLVGGIGLGEENVG-----------YMQVLKTRDPIILSIGWRRFQTIPVYAIEDR 748
P P+++GG+ E G + ++LKT DP++LS+GWRRFQT+P+Y D
Sbjct: 806 PKFPIVMGGLLPTEIKFGIVKARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDS 865
Query: 749 NGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSNNQAS--FRITATAVVLEFNHE 806
RMLKYTPEH +C A F+GPL P T +Q +N+ FRI AT +V E +
Sbjct: 866 RTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVN 925
Query: 807 VKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIG 866
++I KK+KLVG+P KIFK TA IKDMF+S +EVA+ EG +++TVSGIRG++K+A
Sbjct: 926 IEIVKKLKLVGFPYKIFKNTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRAL----- 980
Query: 867 NQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVEIPRFYNPLTTAMQPRDKIWQGM 926
++P EG R FED+ILMSD+V +R W V + +FYNP+T+ + W+G+
Sbjct: 981 SKP--------EGHYRAAFEDKILMSDIVILRSWYPVRVKKFYNPVTSLLLKEKTEWKGL 1032
Query: 927 KTIAELRREHNLSIPVNKDSLYKAIGRRPRKFNPLVIPKSLQAALPFESKPKDI-PSRKR 985
+ ++R NL P N DS Y I R R FN L +PK++Q LPF+S+ + P +K+
Sbjct: 1033 RLTGQIRAAMNLETPSNPDSAYHKIERVERHFNGLKVPKAVQKELPFKSQIHQMKPQKKK 1092
Query: 986 LFLENSRAVVMEPQERKVHALIQHLKLIRNEKMKKRKLKEARKRNEVEAERAKDKQLTRK 1045
++ RAVV+ E+K + IQ + I K KRK ++A +R E + AK ++ +
Sbjct: 1093 TYMA-KRAVVLGGDEKKARSFIQKVLTISKAKDSKRKEQKASQRKERLKKLAKMEEEKSQ 1151
Query: 1046 RQRGERQERYREQDK 1060
R + +++E + + K
Sbjct: 1152 RDKEKKKEYFAQNGK 1166
>sp|Q5VTM2|AGAP9_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9
OS=Homo sapiens GN=AGAP9 PE=2 SV=2
Length = 703
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%)
Query: 117 GKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
GKKRRL +EC DIN MID AK ADL L+LIDAS GFEME FEFLN+ Q HG P ++GV
Sbjct: 18 GKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMEMFEFLNICQAHGFPKILGV 77
Query: 177 LTHLDKFTDKKKLRKTKQHLKHRFGTELYH 206
LTHLD F K+L+KTK+ LKHRF TE+Y
Sbjct: 78 LTHLDSFKHNKQLKKTKKRLKHRFWTEVYQ 107
>sp|A8MV67|YO021_HUMAN Putative BMS1-like protein ENSP00000383088 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 11/100 (11%)
Query: 682 YLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIIL 730
Y+R+ I +VP E V+ DP +P+++GG+G E NVGY+Q +LK+RDPII
Sbjct: 2 YVRVEIENVPCEFVQNIDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIF 61
Query: 731 SIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWG 770
S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FW
Sbjct: 62 SVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWA 101
>sp|A8MXU9|YO022_HUMAN Putative BMS1-like protein ENSP00000383048 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 11/100 (11%)
Query: 682 YLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIIL 730
Y+R+ I +VP E V+ DP +P+++GG+G E NVGY++ +LK+RDPII
Sbjct: 2 YVRVEIENVPCEFVQNIDPHYPIILGGLGNSEGNVGYVEMHLKKHRWYKKILKSRDPIIF 61
Query: 731 SIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWG 770
S+GWRRFQTIP+Y IED NG R+LKYTP+HMHC A FW
Sbjct: 62 SVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWA 101
>sp|A8MTN0|YI027_HUMAN Putative BMS1-like protein ENSP00000382360 OS=Homo sapiens PE=5
SV=1
Length = 101
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 11/100 (11%)
Query: 682 YLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQ-----------VLKTRDPIIL 730
Y+R+ I +VP E V+ FDP +P+++GG+G E NVG++Q +LK++DPII
Sbjct: 2 YVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGHVQMRLKKHRWYKKILKSQDPIIF 61
Query: 731 SIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWG 770
S+GWRRFQTI +Y IED NG R+LKYTP+H+HC A FW
Sbjct: 62 SVGWRRFQTILLYYIEDHNGRQRLLKYTPQHIHCGAAFWA 101
>sp|Q5SWD9|TSR1_MOUSE Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus GN=Tsr1
PE=2 SV=1
Length = 803
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 27/255 (10%)
Query: 668 EVTRLELEGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP 727
E+ E EG G Y+ L + DVP +VEYF P++ + E+ + + ++ +R+P
Sbjct: 542 EIEEKEAEGAEVGWYVTLHVSDVPVSVVEYFRQGAPLIAFSLLPYEQKMSVLNMVVSRNP 601
Query: 728 -----------IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQ 776
+I G+RRF+ P+++ H+ ++ + + P+ P
Sbjct: 602 GNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAAFVVTVFAPITFPP 661
Query: 777 TGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSD 836
V+ + N S + AT + + + + K++ L G+P KIF K A+++ MF +
Sbjct: 662 ASVLLFKQRRNGMHS--LIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNR 719
Query: 837 LEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVF 896
+V + E+RT G RG + KE +G G +C+F+ ++ D V
Sbjct: 720 EDVMWFKPVELRTKWGRRGHI----KEPLGTH----------GHMKCSFDGKLKSQDTVL 765
Query: 897 MRGWADVEIPRFYNP 911
M + V Y+P
Sbjct: 766 MNLYKRVFPKWTYDP 780
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 128 PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKK 187
P D++ ++D AK AD L L+D G++ L+ + GLP + L F KK
Sbjct: 140 PGDLHTLLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGLSGFPPKK 199
Query: 188 KL---RKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWR 244
++ +K + ++ RF + KL L T+++ G L ++ K L++R
Sbjct: 200 QIDARKKLSKMVEKRFPED-----KLLLLD-------TQQESGMLLRQLANQKQRHLAFR 247
Query: 245 TSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGV 304
Y+ D P E + + I GY+RG L + +HI G GD+ + +
Sbjct: 248 DRRAYLFA-HVADFVPSEESDLVG----TLKISGYVRGRTLNVNSLLHIVGHGDFQMNQI 302
Query: 305 TGLADPCPL 313
DP PL
Sbjct: 303 DAPVDPFPL 311
>sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1
PE=2 SV=1
Length = 815
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 33/261 (12%)
Query: 675 EGFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP------- 727
EG G Y+ + I VP ++E+F P+++ + E+ + M +L R P
Sbjct: 561 EGAMVGWYVTVHISAVPVSVMEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNEPIK 620
Query: 728 ----IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLA-PPQTGVVAI 782
+I G+RRF+ P+++ H+ ++ + + P+ PP + +V
Sbjct: 621 AKEELIFHCGFRRFRASPLFSQHSSADKHKSERFLRSDTSVVVTVYAPITFPPASVLVFK 680
Query: 783 QNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQC 842
Q ++ Q + AT +L N + + K+I L G+P KI K+TA+++ MF + +V
Sbjct: 681 QRYNGMQD---LVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDVLWF 737
Query: 843 EGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWAD 902
+ E+RT G RG + KE +G G +C F+ ++ D V M +
Sbjct: 738 KPVELRTKWGRRGHI----KEPLGTH----------GHMKCHFDGQLKSQDTVLMNLYKR 783
Query: 903 VEIPRFYNPLTTAMQPRDKIW 923
V ++P PR W
Sbjct: 784 VYPKWTFDPYV----PRPVTW 800
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 41/326 (12%)
Query: 2 EQQPHKAHRARQSGSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRR 61
+ +PHK+ R R G+ ++ +K + + K N K K R + QR+
Sbjct: 18 QNKPHKSGRHRGRGAQDRE-NKGRVAAKILGKKNKKDLR-----KLDRRHKANQIRRQRK 71
Query: 62 LHIPTIDRSYGE---PPPYVVVVQGPPQVGKSLLIKCL------IKHYTKLKVPEVRGPV 112
+ RS G PP V+ + + K L + I H +++G +
Sbjct: 72 DAVLAEKRSLGTKDGPPHLVIAISLHARAVKDDLFSLVQNNEGDILHVND----QIKGLL 127
Query: 113 TVVSGK-KRRLQFVECP-NDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGL 170
+V K K+R F++ +D+ ++D AK AD L L+D G++ L+ + GL
Sbjct: 128 ALVCPKVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDPQEGWDSYGDYCLSCLFAQGL 187
Query: 171 PNVMGVLTHLDKFTDKKKLRKTKQH---LKHRFGTELYHGAKLFKLSGLIQGKYTKKDIG 227
P+ + + ++ KK+ KQ +++RF AKLF+L T+++
Sbjct: 188 PSYVLAVQGMNYIPIKKRADIKKQLSKVIENRFT-----DAKLFQLD-------TEQEAA 235
Query: 228 NLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKK 287
L IS K L++R+ Y+L R D P + + + + GY+RG L
Sbjct: 236 VLIRQISTQKQRHLAFRSRRSYMLAQR-ADFQPTDESGLVG----TLKLSGYVRGQELNV 290
Query: 288 GTKVHIAGAGDYSLAGVTGLADPCPL 313
VHI G GD+ ++ + DP PL
Sbjct: 291 NRLVHIVGHGDFHMSQIDAPPDPYPL 316
>sp|Q2NL82|TSR1_HUMAN Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens GN=TSR1
PE=1 SV=1
Length = 804
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 717 GYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQ 776
G + +K ++ +I G+RRF+ P+++ H++ ++ M +A + P+ P
Sbjct: 603 GNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPP 662
Query: 777 TGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSD 836
V+ + SN S + AT ++ + + + K++ L G+P KIF K A+++ MF +
Sbjct: 663 ASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNR 720
Query: 837 LEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVF 896
+V + E+RT G RG + KE +G G +C+F+ ++ D V
Sbjct: 721 EDVLWFKPVELRTKWGRRGHI----KEPLGTH----------GHMKCSFDGKLKSQDTVL 766
Query: 897 MRGWADVEIPRFYNP 911
M + V Y+P
Sbjct: 767 MNLYKRVFPKWTYDP 781
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R F P D++ ++D AK AD L L+D G++ L+ + GLP +
Sbjct: 130 KHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAV 189
Query: 178 THLDKFTDKKKL---RKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
+ KK++ +K + ++ RF + KL L T+++ G L ++
Sbjct: 190 QGISGLPLKKQIDTRKKLSKAVEKRFPHD-----KLLLLD-------TQQEAGMLLRQLA 237
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
K L++R Y+ D P E N + I GY+RG L +HI
Sbjct: 238 NQKQQHLAFRDRRAYLFAHAV-DFVPSE----ENNLVGTLKISGYVRGQTLNVNRLLHIV 292
Query: 295 GAGDYSLAGVTGLADPCPL 313
G GD+ + + DP PL
Sbjct: 293 GYGDFQMKQIDAPGDPFPL 311
>sp|Q9VP47|TSR1_DROME Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster
GN=CG7338 PE=1 SV=1
Length = 814
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 673 ELEGFRTGTYLRLGIHDVP------FEMVEYFDPCHPVLVGGIGLGEENVGYMQV----- 721
E EG G Y+ L + +VP F+ + D ++V G+ E + M V
Sbjct: 551 EFEGVLPGLYVTLYVINVPESRWNAFKSAQLMDN---IIVYGMLPHEHQMCVMNVVLQRM 607
Query: 722 ------LKTRDPIILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPP 775
LK+++ +I+ G+RRF P+Y+ H+ +Y + A F+ P+ P
Sbjct: 608 PDSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFP 667
Query: 776 QTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 835
V+A + N ++ + A +L N + + K++ L G+P +I +K+A I+ MF
Sbjct: 668 PAPVLAFK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFY 725
Query: 836 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVV 895
+V + ++RT G G + KE +G G +C F+ ++ D
Sbjct: 726 KEDVEYFKPVKLRTKCGRLGHI----KESLGTH----------GHMKCYFDGQLRSYDTA 771
Query: 896 FM 897
FM
Sbjct: 772 FM 773
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 119 KRRLQFVECP----NDINGMIDCAKFADLALLLIDASHG----FEMETFEFLNLMQNHGL 170
K+R FV P N++ + D K D LLL A+ G F+ N+M G+
Sbjct: 131 KQRFAFVTPPVGRGNELIAL-DYLKVCDTTLLLTTAAFGDDEIFDRWGQRIFNMMSAQGI 189
Query: 171 PNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLA 230
P + L L+ K+ R + + ++L K+ +L + + IG
Sbjct: 190 PTPVVALMDLESINPKR--RPAAKQAAQKVISKLLPEEKIMQLDTASEALNVMRRIGGQK 247
Query: 231 EFISVMKFHSLSWRTSHPYILVDRFE---DVTPPERVHVNNKCDRNVAIYGYLRGCNLKK 287
+ I H+++ R P++ D E P + + + + G+LRG +L
Sbjct: 248 KRI----LHNVANR---PHLFGDVVEFKPGSDPSDDLGT-------LEVTGFLRGQSLNV 293
Query: 288 GTKVHIAGAGDYSLAGVTGLADPCPL 313
VHI G GD+ L+ V DP L
Sbjct: 294 NGLVHIPGLGDFQLSQVVAPPDPYKL 319
>sp|Q5R434|TSR1_PONAB Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii GN=TSR1
PE=2 SV=1
Length = 805
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 27/247 (10%)
Query: 676 GFRTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP-------- 727
G G Y+ L + +VP +VE F P++ + E+ + + ++ RDP
Sbjct: 552 GAEVGCYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKA 611
Query: 728 ---IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQN 784
+I G+RRF+ P+++ H++ ++ M +A + P+ P V+ +
Sbjct: 612 KEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQ 671
Query: 785 FSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEG 844
SN S + AT ++ + + + K++ L G+P K+F K A+++ MF + +V +
Sbjct: 672 KSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFNREDVLWFKP 729
Query: 845 KEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFMRGWADVE 904
E+RT G RG + KE +G G +C+F ++ D V M + V
Sbjct: 730 VELRTKWGRRGHI----KEPLGTH----------GHMKCSFNGKLKSQDTVLMNLYKRVF 775
Query: 905 IPRFYNP 911
Y+P
Sbjct: 776 PKWTYDP 782
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 119 KRRLQFVEC-PNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R F P D++ ++D AK AD L L+D G++ L+ + GLP +
Sbjct: 130 KHRWFFTSARPGDLHIVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAV 189
Query: 178 THLDKFTDKKKL---RKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFIS 234
+ KK++ +K + ++ RF + KL L T+++ G L ++
Sbjct: 190 QGISGLPLKKQIDARKKLSKAVEKRFPHD-----KLLLLD-------TQQEAGMLLRQLA 237
Query: 235 VMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
K L++R Y+ + V E N + I GY+RG L +HI
Sbjct: 238 NQKQQHLAFRDRRAYLFARAVDFVASEE-----NNLVGTLKISGYVRGQTLNVNRLLHIV 292
Query: 295 GAGDYSLAGVTGLADPCPL 313
G GD+ + + DP PL
Sbjct: 293 GHGDFQMKQIDAPGDPFPL 311
>sp|Q54YA7|TSR1_DICDI Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium
discoideum GN=tsr1 PE=3 SV=1
Length = 826
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 112 VTVVSGKKRRLQFVECPN-DINGMIDCAKFADLALLLIDASHG-FEMETFEFLNLMQNHG 169
T+ K R+ +EC + +I+ K +D+ L +IDA+ E +++
Sbjct: 140 TTISLTSKVRMMLLECQTMAYDQVIEFCKLSDIILFVIDANQAKLNSEAERIFTIVKAQS 199
Query: 170 LPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNL 229
+P V+ ++ +LD+ T KK + K+ ++ F + K+ + T + +
Sbjct: 200 VPTVIEIIQNLDQ-TPIKKRNELKKSIQSVFHFHFPNEPKVLPMD-------TNDECSQV 251
Query: 230 AEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGT 289
+I + + + WR PY+L+++ P +V V I G++RG NL
Sbjct: 252 LRYIENIHVNEIIWRKVRPYMLIEK-SSYIPETKV---------VTIDGFIRGNNLSAKQ 301
Query: 290 KVHIAGAGDYSLAGVTGLADP 310
+HI GD+ + + + DP
Sbjct: 302 IIHIPDYGDFQIEKIELIDDP 322
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 713 EENVGYMQVLKTRDPIILSIGWRRFQTIPVYAIEDRN-GWHRMLKYTPEHMHCLAMFWGP 771
E++ Y + +++++ + GWR+F T P+Y+I N + K+ + +A +GP
Sbjct: 637 EKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMATIYGP 696
Query: 772 LAPPQTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCK-IFKKTALIK 830
+ P ++ N + + AT + N + I K+I L G K I KK +K
Sbjct: 697 ITYPPAPLLIF----NGKDCNELVATGYLSSVNPDRIICKRIILTGVIAKSISKKFVTVK 752
Query: 831 DMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRIL 890
DMF ++ + E+ T G G + KE +G G +C F+ +
Sbjct: 753 DMFYYPEDINWFKKVELYTKMGRVGHI----KEPLGTH----------GRMKCQFDGTMN 798
Query: 891 MSDVVFMRGWADV 903
D V M + V
Sbjct: 799 QQDTVCMNLYKRV 811
>sp|O13956|TSR1_SCHPO Ribosome biogenesis protein tsr1 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC23H4.15 PE=3 SV=1
Length = 783
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 678 RTGTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEEN------------VGYMQVLKTR 725
+ G + + + +VP E+ EY++ +LV L EN Y + ++++
Sbjct: 543 KPGKAVYVELRNVPIEIFEYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPIESK 602
Query: 726 DPIILSIGWRRFQTIPVY----AIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVA 781
+ ++L IG RRF P+Y A N + +Y P +A P+ ++
Sbjct: 603 EELLLQIGPRRFMVRPLYSDPTASGASNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIM 662
Query: 782 IQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQ 841
+ S+N S R+ AT + + I K+ L G+P K+ KK I+ MF + +V
Sbjct: 663 FKKSSDN--SLRLAATGSYVNCDTNSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIW 720
Query: 842 CEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
+ ++ T G G + KE +G G + TF +I + D V M
Sbjct: 721 FKPIQLFTKQGRTGYI----KEPLGTH----------GYFKATFNGKITVQDTVAM 762
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 33/196 (16%)
Query: 113 TVVSGKKRRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLM----QNH 168
T + K+ L F+ + +ID K +D + ++ A E EF L+ Q
Sbjct: 124 TTIDRFKQNLLFLLPKREFYSLIDACKVSDYVIFVLSAVQ----EVDEFGELIVRTTQGQ 179
Query: 169 GLPNVMGV---LTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKD 225
G+ +V+ + L+ +D + +++K+ Q + F ++ ++F +D
Sbjct: 180 GISSVLSMVHDLSEVDSLKTRNEVKKSLQSFMNFFFSD---QERVFAAD-------VSQD 229
Query: 226 IGNLAEFISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNL 285
N+ + + WR S Y+L + + +N N+ + G +RG L
Sbjct: 230 ALNVMRALCTSHPRGIHWRDSRSYLL---------SQEISYSNG---NLLVRGIVRGKGL 277
Query: 286 KKGTKVHIAGAGDYSL 301
+HI G GD+++
Sbjct: 278 DPNRLIHIQGFGDFAI 293
>sp|Q19329|TSR1_CAEEL Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis elegans
GN=tag-151 PE=3 SV=1
Length = 785
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 119 KRRLQFVECPND-INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVL 177
K R+ F+ D ++G++D + +D+ L S + L +++ +GLP ++ V+
Sbjct: 129 KSRVSFLTPDKDNVDGVLDAIRASDVLCFLWPMSAELSEWDEQLLTIIKANGLPTIVSVV 188
Query: 178 THLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMK 237
L + KK ++ G E +G++ ++ L ++ K
Sbjct: 189 PGLGSIANHKKKEDVRK------GIEFIISKWSMSNAGVMPADSVTDNL-QLLRILNETK 241
Query: 238 FHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIY--GYLRGCNLKKGTKVHIAG 295
L+ + H Y+LV+ E ++K + GYLRG VH+ G
Sbjct: 242 KKPLTLQARHSYMLVENLE---------CSDKTGETCTLVAQGYLRGPEWNANNLVHLPG 292
Query: 296 AGDYSLAGVTGLADPCPL 313
GD+ ++ + DP PL
Sbjct: 293 FGDFQISKIESTVDPHPL 310
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 680 GTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP------------ 727
G + + I +VP ++E + +++ + E + + ++ + P
Sbjct: 528 GAFASVFIENVPVAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPITSDQNQ 587
Query: 728 -IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFS 786
I +G+R+F+ V++ ++ ++ P +A + P+ V+ +
Sbjct: 588 KFIFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQ-- 645
Query: 787 NNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKE 846
+++ + AT +L+ N + + K+ L G+P KI ++ +++ MF + ++ + E
Sbjct: 646 DDKGRQELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFKPVE 705
Query: 847 VRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
+ T SG RG +K+A +G G +C F+ ++ D V +
Sbjct: 706 LYTPSGRRGHIKEA----VGTH----------GNMKCRFDQQLNAQDSVML 742
>sp|Q61WR2|TSR1_CAEBR Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis briggsae
GN=tag-151 PE=3 SV=1
Length = 788
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 119 KRRLQFVECPN--DINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
K R+ F+ P+ +++ ++D + +D+ L S + L + + GLP ++ V
Sbjct: 129 KSRISFL-TPDKENVDSVLDAIRASDVLCFLWPLSAELSEWDEQLLTICKAAGLPTIVSV 187
Query: 177 LTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVM 236
+ L + KK ++ G E +G++ ++ L ++
Sbjct: 188 VPGLGGIQNHKKKEDVRK------GIEFTISKWSMSNAGVMPADSVTDNL-QLLRTLNET 240
Query: 237 KFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGA 296
K L+ + H Y+LV+ E PE + + GYLRG +H+ G
Sbjct: 241 KKKPLTLQARHSYMLVENLEATESPE-----DSSKITLKAQGYLRGPEWNANNLIHLPGF 295
Query: 297 GDYSLAGVTGLADPCPLPSAAKK 319
GD+ ++ + ADP PL ++ K
Sbjct: 296 GDFQISKIETAADPHPLKTSPPK 318
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 680 GTYLRLGIHDVPFEMVEYFDPCHPVLVGGIGLGEENVGYMQVLKTRDP------------ 727
G + + I +VP ++E + +++ + E+ + + ++ + P
Sbjct: 532 GVFASVYIENVPVSVMEAYKETKNLVLFQLLPHEQKMSILNMVLKKHPSCTVPIGSEDQK 591
Query: 728 IILSIGWRRFQTIPVYAIEDRNGWHRMLKYTPEHMHCLAMFWGPLAPPQTGVVAIQNFSN 787
I +G+R+F+ V + ++ ++ P +A + P+ V+ + +
Sbjct: 592 FIFYVGFRQFEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQ--D 649
Query: 788 NQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEV 847
++ + AT VL+ N + + K+ L G+P KI ++ +++ MF + ++ + E+
Sbjct: 650 DKGRQELVATGSVLDTNPDRIVLKRTVLSGHPYKINRRAVVVRYMFFNREDIDWFKPVEL 709
Query: 848 RTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVVFM 897
T SG RG +K+A +G G +C F+ ++ D V +
Sbjct: 710 YTPSGRRGHIKEA----VGTH----------GHMKCRFDQQLNAQDSVML 745
>sp|C5C9T1|IF2_MICLC Translation initiation factor IF-2 OS=Micrococcus luteus (strain
ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB
9278 / NCTC 2665 / VKM Ac-2230) GN=infB PE=3 SV=1
Length = 930
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 73 EPPPYVVVVQGPPQVGKSLLIKCL-------------IKHYTKLKVPEVRGPVTVVSGKK 119
EP P VV V G GK+ L+ + +H +VP G++
Sbjct: 421 EPRPAVVTVMGHVDHGKTRLLDAIRSSNVIEGEAGGITQHIGAYQVPVEH------EGEQ 474
Query: 120 RRLQFVECPN--DINGM-IDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
RRL F++ P M AK D+A+L++ A G +T E LN Q+ G+P V+ V
Sbjct: 475 RRLTFIDTPGHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNHAQSAGVPIVVAV 534
Query: 177 LTHLDKFTDK-KKLRKTKQHLKHRFGTELYHGAKLF 211
+DK T K+R Q ++ E Y G +F
Sbjct: 535 -NKIDKDTAAPDKIR--GQLTEYGLVPEEYGGDTMF 567
>sp|Q07381|TSR1_YEAST Ribosome biogenesis protein TSR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TSR1 PE=1 SV=1
Length = 788
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 134 MIDCAKFADLALLLIDASHGFEMETFE-FLNLMQNHGLPNVMGVLTHLDKFTDKKKLR-K 191
++DCAK AD + + + E E + ++ G+ + +GV+++L +K+K +
Sbjct: 148 ILDCAKVADFVVFGLSGVQEVDEEFGEQIIRALELQGIASYIGVISNLSAVHEKEKFQLD 207
Query: 192 TKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTSHPYIL 251
KQ L+ F +++ L D N+ + S++WR + Y++
Sbjct: 208 VKQSLESYFKHFFPSEERVYNLE-------KNSDALNVLRTLCQRLPRSINWRDNRGYVV 260
Query: 252 VDRFEDV-TPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAGDYSLAGVTGLADP 310
D + V T P+ ++ I G +RG VHI GD+ L + +++
Sbjct: 261 ADFVDFVETSPD--------SGDLVIEGTVRGIGFNANRLVHIPDFGDFQLNKIEKISE- 311
Query: 311 CPLPSAAKKKGLRDK 325
S+ K+K +++K
Sbjct: 312 ----SSQKRKIIKEK 322
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 20/195 (10%)
Query: 718 YMQVLKTRDPIILSIGWRRFQTIPVYA--IEDRNGWHRMLKYTPEHMHCLAMFWGPLAPP 775
Y + + +++PI++ G RR+ P+++ N H+ ++ +A P+
Sbjct: 604 YDKPVPSQEPIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPVDFT 663
Query: 776 QTGVVAIQNFSNNQASFRITATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 835
Q+ + + + + + L +H + K+ L G+P + K ++ MF
Sbjct: 664 QSPAIFFKPSPTDAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYMFFR 723
Query: 836 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDVV 895
+V + + T SG G + KE +G G + TF+ ++ DVV
Sbjct: 724 PEDVEWFKSIPLFTKSGRSGFI----KESLGTH----------GYFKATFDGKLSAQDVV 769
Query: 896 FM----RGWADVEIP 906
M R W +P
Sbjct: 770 AMSLYKRMWPMPSLP 784
>sp|A4FM34|IF2_SACEN Translation initiation factor IF-2 OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=infB PE=3 SV=1
Length = 1027
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 52 MRTAEKEQRRLHIPTIDRSYGEPP---------PYVVVVQGPPQVGKSLLIKCLIKHYTK 102
M + E E R L + + D S+G+P P VV V G GK+ L+ + K
Sbjct: 493 MVSPEDEDREL-LESFDISFGDPGSSDEELMSRPPVVTVMGHVDHGKTRLLDTIRK--AN 549
Query: 103 LKVPEVRG---------PVTVVSGKKRRLQFVECPN--DINGM-IDCAKFADLALLLIDA 150
++ E G +T + G +R + F++ P M AK D+A+L++ A
Sbjct: 550 VQAGEAGGITQHIGAYQVITELEGNERPITFIDTPGHEAFTAMRARGAKSTDIAVLVVAA 609
Query: 151 SHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKL 210
G +T E LN Q G+P V+ V + + K+R +Q ++ E Y G +
Sbjct: 610 DDGVMPQTVEALNHAQAAGVPIVVAVNKIDVEGANPAKVR--QQLTEYNLVAEEYGGETM 667
Query: 211 FKLSGLIQGKYTKKDIGNLAEFISVMKFHSLSWRTS 246
F QG +I +L E I + +L R +
Sbjct: 668 FVDISARQG----TNIESLLEAILLTADATLDLRAN 699
>sp|B0U3D9|ERA_XYLFM GTPase Era OS=Xylella fastidiosa (strain M12) GN=era PE=3 SV=1
Length = 298
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 79 VVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVT------VVSGKKRRLQFVECP---- 128
+ V G P VGKS L L+ TK+ + R T + + + ++ V+ P
Sbjct: 12 IAVIGRPNVGKSTLTNALVG--TKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPGLHR 69
Query: 129 ---NDINGMID-----CAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
+ +N +++ + D ALL+ +++H E +T + NL+ + G+P V+ V+ +
Sbjct: 70 EQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEEDTLAY-NLLNDTGIPVVL-VINKI 127
Query: 181 DKFTDKKKLRKTKQHL--KHRFGTELYHGAKLFKLSGL 216
D+F DK L H+ H F T H K GL
Sbjct: 128 DRFKDKSALLPLLTHINENHTFAT--IHPVSALKRKGL 163
>sp|Q87C05|ERA_XYLFT GTPase Era OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964)
GN=era PE=3 SV=1
Length = 298
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 79 VVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVT------VVSGKKRRLQFVECP---- 128
+ V G P VGKS L L+ TK+ + R T + + + ++ V+ P
Sbjct: 12 IAVIGRPNVGKSTLTNALVG--TKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPGLHR 69
Query: 129 ---NDINGMID-----CAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
+ +N +++ + D ALL+ +++H E +T + NL+ + G+P V+ V+ +
Sbjct: 70 EQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEEDTLAY-NLLNDTGIPVVL-VINKI 127
Query: 181 DKFTDKKKLRKTKQHL--KHRFGTELYHGAKLFKLSGL 216
D+F DK L H+ H F T H K GL
Sbjct: 128 DRFKDKSALLPFLTHINENHTFAT--IHPVSALKRKGL 163
>sp|B2I605|ERA_XYLF2 GTPase Era OS=Xylella fastidiosa (strain M23) GN=era PE=3 SV=1
Length = 298
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 79 VVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVT------VVSGKKRRLQFVECP---- 128
+ V G P VGKS L L+ TK+ + R T + + + ++ V+ P
Sbjct: 12 IAVIGRPNVGKSTLTNALVG--TKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPGLHR 69
Query: 129 ---NDINGMID-----CAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
+ +N +++ + D ALL+ +++H E +T + NL+ + G+P V+ V+ +
Sbjct: 70 EQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEEDTLAY-NLLNDTGIPVVL-VINKI 127
Query: 181 DKFTDKKKLRKTKQHL--KHRFGTELYHGAKLFKLSGL 216
D+F DK L H+ H F T H K GL
Sbjct: 128 DRFKDKSALLPFLTHINENHTFAT--IHPVSALKRKGL 163
>sp|Q9PB97|ERA_XYLFA GTPase Era OS=Xylella fastidiosa (strain 9a5c) GN=era PE=3 SV=1
Length = 298
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 79 VVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVT------VVSGKKRRLQFVECP---- 128
+ V G P VGKS L L+ TK+ + R T + + + ++ V+ P
Sbjct: 12 IAVIGRPNVGKSTLTNALVG--TKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPGLHR 69
Query: 129 ---NDINGMID-----CAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHL 180
+ +N +++ + D ALL+ +++H E +T + NL+ + G+P V+ V+ +
Sbjct: 70 EQKHPMNRLMNRTARGSLEDVDAALLVTESTHWNEEDTLAY-NLLNDTGIPVVL-VINKI 127
Query: 181 DKFTDKKKLRKTKQHL--KHRFGTELYHGAKLFKLSGL 216
D+F DK L H+ H F T H K GL
Sbjct: 128 DRFKDKSALLPFLTHINENHTFTT--IHPVSALKRKGL 163
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 15 GSSAKKISKSEINKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPTIDRSYGEP 74
GS+ SK + P P ++ + + +++A + LH PT+ S+G
Sbjct: 220 GSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI--EIPLHQPTLFSSFGVS 277
Query: 75 PPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTV 114
PP +++ GPP GK++L++ ++ + + V + GP V
Sbjct: 278 PPRGILLHGPPGTGKTMLLR-VVANTSNAHVLTINGPSIV 316
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 16 SSAKKISKSEINKQDKKKPNPKAF------GFASSVKAKRSMMRTAEKEQRRLHIPTIDR 69
SS +++ +EI+K K++ N G +S +KA R ++ K+ P + +
Sbjct: 327 SSTTRVNFTEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQ------PELFK 380
Query: 70 SYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPVTVVSG 117
SYG P P V++ GPP GK+++ + + EV V+V++G
Sbjct: 381 SYGIPAPRGVLLYGPPGTGKTMIARAVAN--------EVGAYVSVING 420
>sp|Q4FLK5|EFTU_PELUB Elongation factor Tu OS=Pelagibacter ubique (strain HTCC1062)
GN=tuf PE=3 SV=1
Length = 396
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 118 KKRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
+KR V+CP + MI A D A+L+++A+ G +T E + L + G+P ++
Sbjct: 73 EKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMPQTREHILLGRQVGIPAIV 132
Query: 175 GVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAK--LFKLSGLIQGKYTKKDIGNLAEF 232
L +D+ DK + ++ ++ + Y G K + K S L + ++IG
Sbjct: 133 VYLNKVDQVDDKDMIELVEEEIRELLTSYKYPGDKTPIVKGSALAAVEGRDEEIGK-NSI 191
Query: 233 ISVMK 237
I +MK
Sbjct: 192 IELMK 196
>sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens
GN=EIF5B PE=1 SV=4
Length = 1220
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 138 AKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKK--------- 188
+ D+A+L++D HG E +T E +NL+++ P ++ L +D+ D KK
Sbjct: 717 SSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVA-LNKIDRLYDWKKSPDSDVAAT 775
Query: 189 LRKTKQHLKHRF 200
L+K K++ K F
Sbjct: 776 LKKQKKNTKDEF 787
>sp|B2GUV7|IF2P_RAT Eukaryotic translation initiation factor 5B OS=Rattus norvegicus
GN=Eif5b PE=1 SV=1
Length = 1216
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 74/196 (37%), Gaps = 22/196 (11%)
Query: 138 AKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKK--------- 188
+ D+A+L++D HG E +T E +N++++ P ++ L +D+ D KK
Sbjct: 713 SSLCDIAILVVDIMHGLEPQTIESINILKSKKCPFIVA-LNKIDRLYDWKKSPDSDVAVT 771
Query: 189 LRKTKQHLKHRFGTELYHGAKLFKLSGLIQGK-YTKKDIGNLAEFISVMKFHSLSWRTSH 247
L+K K++ K F F GL Y KD + H+ S
Sbjct: 772 LKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPT-SAHTGDGMGSL 830
Query: 248 PYILVDRFEDVTPPERVH----------VNNKCDRNVAIYGYLRGCNLKKGTKVHIAGAG 297
Y+LV+ + + H V I L LK+G + + G
Sbjct: 831 IYLLVELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVE 890
Query: 298 DYSLAGVTGLADPCPL 313
+ + GL P P+
Sbjct: 891 GPIVTQIRGLLLPPPM 906
>sp|Q1QDV6|LEPA_PSYCK Elongation factor 4 OS=Psychrobacter cryohalolentis (strain K5)
GN=lepA PE=3 SV=1
Length = 598
Score = 40.0 bits (92), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 116 SGKKRRLQFVECPNDINGMIDCAK---FADLALLLIDASHGFEMETFEFLNLMQNHGLPN 172
+G++ +L F++ P ++ + ++ + ALL++DA+ G E ++ + GL
Sbjct: 70 NGERYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAVDQGL-E 128
Query: 173 VMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF 232
VM VL +D + + + Q ++ G + ++ SGL K + L EF
Sbjct: 129 VMAVLNKID--LPQVEPERVIQEIEDIIGIDAVDAPRVSAKSGLGVDKLLEA----LVEF 182
Query: 233 ISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR--GCNLKKGTK 290
I P DR P + + +++ D + + +R +KKG K
Sbjct: 183 I--------------PAPTGDRD---APLQALIIDSWFDNYLGVVSLVRVRQGTIKKGDK 225
Query: 291 VHIAGAGDYSLAGVTGLADPCPLPSAAKKKG 321
++I D L G G+ P PL + + G
Sbjct: 226 LYIKSTKDAHLVGSIGVFTPKPLDTGILEAG 256
>sp|Q83ES6|EFTU_COXBU Elongation factor Tu OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=tufA PE=1 SV=1
Length = 397
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 119 KRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
KR V+CP + MI A D A+L++ A+ G +T E + L + G+PN++
Sbjct: 74 KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHIVLAKQVGVPNIVV 133
Query: 176 VLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF--I 233
L D DK+ L + ++ + + G + + +I G K G+ +E
Sbjct: 134 YLNKADMVDDKELLELVEMEVRDLLNSYDFPGDE----TPIIVGSALKALEGDKSEVGEP 189
Query: 234 SVMKF-HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVH 292
S++K ++ P +D+ + P E V + R + G + +K G ++
Sbjct: 190 SIIKLVETMDTYFPQPERAIDK-PFLMPIEDVF--SISGRGTVVTGRVERGIIKVGDEIE 246
Query: 293 IAGAGDYSLAGVTGL 307
I G D + TG+
Sbjct: 247 IVGIKDTTKTTCTGV 261
>sp|A9NAK7|EFTU_COXBR Elongation factor Tu OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=tuf1 PE=3 SV=1
Length = 397
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 119 KRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
KR V+CP + MI A D A+L++ A+ G +T E + L + G+PN++
Sbjct: 74 KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHIVLAKQVGVPNIVV 133
Query: 176 VLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF--I 233
L D DK+ L + ++ + + G + + +I G K G+ +E
Sbjct: 134 YLNKADMVDDKELLELVEMEVRDLLNSYDFPGDE----TPIIVGSALKALEGDKSEVGEP 189
Query: 234 SVMKF-HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVH 292
S++K ++ P +D+ + P E V + R + G + +K G ++
Sbjct: 190 SIIKLVETMDTYFPQPERAIDK-PFLMPIEDVF--SISGRGTVVTGRVERGIIKVGDEIE 246
Query: 293 IAGAGDYSLAGVTGL 307
I G D + TG+
Sbjct: 247 IVGIKDTTKTTCTGV 261
>sp|A9KD33|EFTU_COXBN Elongation factor Tu OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=tuf1 PE=3 SV=1
Length = 397
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 119 KRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
KR V+CP + MI A D A+L++ A+ G +T E + L + G+PN++
Sbjct: 74 KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHIVLAKQVGVPNIVV 133
Query: 176 VLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF--I 233
L D DK+ L + ++ + + G + + +I G K G+ +E
Sbjct: 134 YLNKADMVDDKELLELVEMEVRDLLNSYDFPGDE----TPIIVGSALKALEGDKSEVGEP 189
Query: 234 SVMKF-HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVH 292
S++K ++ P +D+ + P E V + R + G + +K G ++
Sbjct: 190 SIIKLVETMDTYFPQPERAIDK-PFLMPIEDVF--SISGRGTVVTGRVERGIIKVGDEIE 246
Query: 293 IAGAGDYSLAGVTGL 307
I G D + TG+
Sbjct: 247 IVGIKDTTKTTCTGV 261
>sp|Q05D44|IF2P_MOUSE Eukaryotic translation initiation factor 5B OS=Mus musculus
GN=Eif5b PE=1 SV=2
Length = 1216
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 138 AKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKK--------- 188
+ D+A+L++D HG E +T E +N++++ P ++ L +D+ D KK
Sbjct: 713 SSLCDIAILVVDIMHGLEPQTIESINILKSKKCPFIVA-LNKIDRLYDWKKSPDSDVAVT 771
Query: 189 LRKTKQHLKHRF 200
L+K K++ K F
Sbjct: 772 LKKQKKNTKDEF 783
>sp|Q4FUV9|LEPA_PSYA2 Elongation factor 4 OS=Psychrobacter arcticus (strain DSM 17307 /
273-4) GN=lepA PE=3 SV=1
Length = 598
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 116 SGKKRRLQFVECPNDINGMIDCAK---FADLALLLIDASHGFEMETFEFLNLMQNHGLPN 172
+G++ +L F++ P ++ + ++ + ALL++DA+ G E ++ + GL
Sbjct: 70 NGERYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAVDQGL-E 128
Query: 173 VMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEF 232
VM VL +D + + + Q ++ G + ++ SGL K + L EF
Sbjct: 129 VMAVLNKID--LPQVEPERVIQEIEDIIGIDAVDAPRVSAKSGLGVDKLLEA----LVEF 182
Query: 233 ISVMKFHSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLR--GCNLKKGTK 290
I P DR P + + +++ D + + +R +KKG K
Sbjct: 183 I--------------PAPTGDRD---APLQALIIDSWFDNYLGVVSLVRVRQGTIKKGDK 225
Query: 291 VHIAGAGDYSLAGVTGLADPCPLPSAAKKKG 321
++I D L G G+ P PL + + G
Sbjct: 226 LYIKSTKDAHLVGSIGVFTPKPLDTGILEAG 256
>sp|A4WVL0|EFTU_RHOS5 Elongation factor Tu OS=Rhodobacter sphaeroides (strain ATCC 17025
/ ATH 2.4.3) GN=tuf1 PE=3 SV=1
Length = 391
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 88 GKSLLIKCLIKHYTKLKV-------PEVRGPVTVVS-------GKKRRLQFVECPND--- 130
GK+ L + K++ + + PE R +S + R V+CP
Sbjct: 24 GKTTLTAAITKYFGEFRAYDQIDGAPEERARGITISTAHVEYESESRHYAHVDCPGHADY 83
Query: 131 INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLR 190
+ MI A D A+L+++A+ G +T E + L + G+P ++ + +D+ D + L
Sbjct: 84 VKNMITGAAQMDGAILVVNAADGPMPQTREHILLGRQVGIPYMVVYMNKVDQVDDPELLE 143
Query: 191 KTKQHLKHRFGTELYHG--AKLFKLSGLIQGKYTKKDIG 227
+ ++ + Y G + K S L T K+IG
Sbjct: 144 LVEMEIRELLSSYDYPGDDIPIIKGSALAAMNGTDKEIG 182
>sp|B8DIZ5|LEPA_DESVM Elongation factor 4 OS=Desulfovibrio vulgaris (strain Miyazaki F /
DSM 19637) GN=lepA PE=3 SV=1
Length = 601
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 103 LKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAK---FADLALLLIDASHGFEMETF 159
+K VR P T G+K L ++ P ++ + ++ + ALL++DAS G E +T
Sbjct: 57 IKAQSVRIPYTAKDGRKYVLNLIDTPGHVDFNYEVSRSLAACEGALLVVDASQGVEAQTL 116
Query: 160 EFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQG 219
+ L +H L V+ VL +D + K ++ G + + +GL
Sbjct: 117 ANVYLALDHNL-EVIPVLNKVD--LPSADADRVKHEIEESIGLDCSDAVAVSAKTGLNVD 173
Query: 220 KYTKKDI-------GNLAEFISVMKFHSLSWRTSHPYILV 252
K + + GNL + + F SW S+ ++V
Sbjct: 174 KVLEAIVERLPAPEGNLNAPLKALIFD--SWYDSYQGVVV 211
>sp|A7IIE4|DER_XANP2 GTPase Der OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 /
Py2) GN=der PE=3 SV=1
Length = 458
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%)
Query: 76 PYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPE---VRGPVTV-------------VSGKK 119
P V V G P GKS LI L+ L PE R ++V +G +
Sbjct: 193 PIKVTVLGRPNAGKSTLINRLLGEDRLLTGPEAGITRDSISVEVTYAGAKLEVFDTAGLR 252
Query: 120 RR------LQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNV 173
+R L+ + + + M KFA++ +LL+DA+H FE + +L+ G V
Sbjct: 253 KRARIEDKLEKLSAADALRAM----KFAEVVVLLVDATHPFEEQDLRIADLVAREGRALV 308
Query: 174 MG 175
+G
Sbjct: 309 IG 310
>sp|Q1QMP4|DER_NITHX GTPase Der OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=der PE=3 SV=1
Length = 460
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 76 PYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPE---VRGPVTV-------------VSGKK 119
P V + G P GKS LI L+ L PE R ++V +G +
Sbjct: 188 PIRVAIVGRPNAGKSTLINYLLGEERLLTSPEAGTTRDSISVELNWQGRDFRIFDTAGLR 247
Query: 120 RRLQFVECPN--DINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
RR + E + + A+FA++ +L++DA + FE + +L++ G V+ V
Sbjct: 248 RRSRIEEKLEKLSVADTLRAARFAEVVVLMMDAQNRFEEQDLRIADLIEREGRALVIAV 306
>sp|Q12Z93|IF2P_METBU Probable translation initiation factor IF-2 OS=Methanococcoides
burtonii (strain DSM 6242) GN=infB PE=3 SV=1
Length = 591
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 138 AKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKF 183
ADLA++++D + GF+ +T E LN++Q H P V+ V +DK
Sbjct: 93 GALADLAVVIVDINEGFKPQTIESLNILQQHKTPFVV-VANKIDKI 137
>sp|A5UJM9|IF2P_METS3 Probable translation initiation factor IF-2 OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=infB PE=3
SV=1
Length = 596
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 18/89 (20%)
Query: 140 FADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTHLDKFTDKKKLRKTKQHLKHR 199
ADLA+L++D + GF+ +T+E LN+++ + P ++ V +D+
Sbjct: 93 LADLAVLILDVNDGFKPQTYEALNILKMYKTPFIV-VANKIDRL---------------- 135
Query: 200 FGTELYHGAKLFKLSGLIQGKYTKKDIGN 228
FG E++ GA F+ + Q K ++D+ N
Sbjct: 136 FGWEVHEGAS-FRETFSNQAKSVQQDLDN 163
>sp|P17746|EFTU_CHLRE Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii
GN=tufA PE=3 SV=1
Length = 418
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 118 KKRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVM 174
+KR V+CP + MI A D A+L++ + G +T E + L + G+PNV+
Sbjct: 73 EKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVV 132
Query: 175 GVLTHLDKFTDKKKLRKTKQHL-----KHRF-GTEL--YHGAKLFKLSGLIQGKYTKK 224
L D+ DK+ L + + K+ F G E+ G+ L L LI+ T++
Sbjct: 133 VFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQR 190
>sp|P84398|VHS_EHV1V Virion host shutoff protein OS=Equine herpesvirus 1 (strain V592)
GN=19 PE=3 SV=1
Length = 497
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 34 PNPKAFGF-----ASSVKAKRSMMRTAEKEQRRLHIPTIDR--SYGEPPPYVVVVQGPPQ 86
P K FG+ + K + R+AE R LH+ R E P +V PP+
Sbjct: 345 PAGKGFGYRENPAVETCKRRTRPRRSAEASGRILHLKYTSRYPPIMESAPRALVRMAPPK 404
Query: 87 VGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAK 139
+L + +KH + PE RG ++++ RRL + P++ + + D K
Sbjct: 405 TRHEVLERKFVKHVVSMLTPERRGSLSIM----RRLPITQEPSNFSLVHDTLK 453
>sp|P28957|VHS_EHV1B Virion host shutoff protein OS=Equine herpesvirus 1 (strain Ab4p)
GN=19 PE=3 SV=1
Length = 497
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 34 PNPKAFGF-----ASSVKAKRSMMRTAEKEQRRLHIPTIDR--SYGEPPPYVVVVQGPPQ 86
P K FG+ + K + R+AE R LH+ R E P +V PP+
Sbjct: 345 PAGKGFGYRENPAVETCKRRTRPRRSAEASGRILHLKYTSRYPPIMESAPRALVRMAPPK 404
Query: 87 VGKSLLIKCLIKHYTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMIDCAK 139
+L + +KH + PE RG ++++ RRL + P++ + + D K
Sbjct: 405 TRHEVLERKFVKHVVSMLTPERRGSLSIM----RRLPITQEPSNFSLVHDTLK 453
>sp|O21245|EFTU_RECAM Elongation factor Tu, mitochondrial OS=Reclinomonas americana
GN=TUFA PE=3 SV=1
Length = 394
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 119 KRRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMG 175
KR ++CP + MI A D A+L++ A G +T E + L + G+P+++
Sbjct: 74 KRHYAHIDCPGHEDYVKNMITGAAQMDGAILVVSAVDGPMPQTREHILLSRQVGVPSLVV 133
Query: 176 VLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNLAEFISV 235
L +D D + L + ++ + Y G ++ +I+G K G + S+
Sbjct: 134 FLNKVDMVNDPEMLDLVEMEVRELLLSYKYPGDEI----PIIRGSALKALQGEIEYKKSI 189
Query: 236 MKF-HSLSWRTSHPYILVDRFEDVTPPERVHVNNKCDRNVAIYGYLRGCNLKKGTKVHIA 294
+K ++ P DR + P E V + R + G + +K G V I
Sbjct: 190 LKLMEAVDNYIPQPERSFDR-PFLMPVEDVF--SIAGRGTVVTGRVEQGQIKIGDAVEII 246
Query: 295 GAGDYSLAGVTGL 307
G G TG+
Sbjct: 247 GLGSTVKTTCTGI 259
>sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5 OS=Mus musculus GN=Alkbh5 PE=1 SV=2
Length = 395
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 478 PTSATLSKEVQDSSDSEESDDDEFFRPKVEGNKKLRE-VLDGRLFNMDECSKFNSYGDLK 536
P S T ++ Q+ SD E SD +E K E +K++ + RLF+ DECSK + D
Sbjct: 52 PASGTTKRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEV 111
Query: 537 SSKGE 541
S+ E
Sbjct: 112 VSRAE 116
>sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5 OS=Rattus norvegicus GN=Alkbh5 PE=3 SV=1
Length = 395
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 478 PTSATLSKEVQDSSDSEESDDDEFFRPKVEGNKKLRE-VLDGRLFNMDECSKFNSYGDLK 536
P S T ++ Q+ SD E SD +E K E +K++ + RLF+ DECSK + D
Sbjct: 52 PVSGTTKRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEV 111
Query: 537 SSKGE 541
S+ E
Sbjct: 112 VSRAE 116
>sp|B2V5W6|DER_SULSY GTPase Der OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=der PE=3
SV=1
Length = 445
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 79 VVVQGPPQVGKSLLIKCLIKHYTKLKVPEVRGPV-------------------TVVSGKK 119
V + G P GKS LI L+ ++ V E+ G T KK
Sbjct: 184 VAIVGKPNAGKSSLINALLNE-ERVLVSEIPGTTRDTVDILYEKDGQKFLFLDTAGMRKK 242
Query: 120 RRLQFVECPNDINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGVLTH 179
++ F + I+ + AD+ +L+IDA+ G + + L+Q P V+ V+
Sbjct: 243 SKVDFGLEFFSVGRTIEAIEKADVVVLVIDANQGATEQDTKIAGLIQRRYKPAVI-VINK 301
Query: 180 LDKFTDKKKLRKTKQHLKHRF 200
+D DKK L K ++ ++ R
Sbjct: 302 IDT-VDKKTLEKVEKQVRERL 321
>sp|Q33451|EFTU_EIMTE Elongation factor Tu, apicoplast OS=Eimeria tenella GN=tufA PE=3
SV=1
Length = 403
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 120 RRLQFVECPND---INGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHGLPNVMGV 176
R ++CP I MI A D A+L++ A+ G +T E L L + G+PN++
Sbjct: 75 RHYAHIDCPGHADYIKNMITGAAQMDGAILVVSATDGPMPQTREHLLLAKQVGVPNIIVF 134
Query: 177 LTHLDKFTD 185
L +D D
Sbjct: 135 LNKIDMVED 143
>sp|Q28QC6|DER_JANSC GTPase Der OS=Jannaschia sp. (strain CCS1) GN=der PE=3 SV=1
Length = 479
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 68 DRSYGEPPPYVVVVQGPPQVGKSLLIKCLIKHYTKLKVPE---VRGPVTV---------- 114
DR P + V G P GKS LI +I L PE R + +
Sbjct: 182 DRVITHSKPLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITRDAIGLTFEWDDVPMR 241
Query: 115 ---VSGKKRRLQFVECPN--DINGMIDCAKFADLALLLIDASHGFEMETFEFLNLMQNHG 169
+G ++R + E ++ + KFA++ ++L+DA+ FE + +L + G
Sbjct: 242 IFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFESQDLRIADLAEREG 301
Query: 170 LPNVMGVLTHLDKFTDKKKLRKTKQHLKHRFGTELYHGAKLFKLSGLIQGKYTKKDIGNL 229
V+ V + ++KL+ + L+ R +L GA L +S T K + L
Sbjct: 302 RAVVIAVNKWDVEPEKQQKLKDLRVGLE-RLLPQL-RGAPLVTVSA-----KTGKGLDKL 354
Query: 230 AEFISVMKFHSLSWRT 245
++MK H+ +W T
Sbjct: 355 --HAAIMKIHA-TWNT 367
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 26 INKQDKKKPNPKAFGFASSVKAKRSMMRTAEKEQRRLHIPTIDRSYGEPPPYVVVVQGPP 85
IN++D++ N G+ ++ M + E + L P + ++ G PP V++ GPP
Sbjct: 199 INREDEEN-NMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPP 257
Query: 86 QVGKSLLIKCLIKH----YTKLKVPEVRGPVTVVSGKKRRLQFVECPNDINGMI 135
GK+L+ + + + + PEV + S R F E + +I
Sbjct: 258 GTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAII 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 406,942,640
Number of Sequences: 539616
Number of extensions: 18327530
Number of successful extensions: 74878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 70638
Number of HSP's gapped (non-prelim): 3653
length of query: 1068
length of database: 191,569,459
effective HSP length: 128
effective length of query: 940
effective length of database: 122,498,611
effective search space: 115148694340
effective search space used: 115148694340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)