Query 046723
Match_columns 562
No_of_seqs 339 out of 3209
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 06:11:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046723.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046723hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.6E-20 1.1E-24 187.8 22.7 284 183-521 43-367 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 3E-19 2.2E-23 178.4 23.2 294 165-513 47-382 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.8 1.6E-18 1.2E-22 167.3 21.5 285 187-508 13-299 (305)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.7E-16 1.2E-20 152.9 20.6 262 207-515 11-283 (305)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 2.4E-17 1.8E-21 159.5 11.5 86 387-493 217-304 (313)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 4.3E-17 3.1E-21 157.7 9.1 252 206-522 50-309 (313)
7 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 4.8E-16 3.5E-20 142.6 12.2 118 187-311 22-139 (227)
8 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 4.3E-15 3.1E-19 145.7 18.9 62 442-524 282-343 (353)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.6 2.7E-15 1.9E-19 141.1 16.2 126 185-314 11-137 (266)
10 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 5.5E-15 4E-19 133.5 13.8 148 183-354 45-192 (210)
11 d2astb2 c.10.1.3 (B:2136-2419) 99.6 8.3E-16 6E-20 145.9 8.3 251 209-520 3-261 (284)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.5E-14 1.1E-18 132.4 15.4 151 180-354 37-187 (227)
13 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.1E-14 7.9E-19 130.4 13.7 150 182-355 38-187 (199)
14 d1p9ag_ c.10.2.7 (G:) von Will 99.6 8.6E-15 6.2E-19 137.6 13.6 170 168-356 16-188 (266)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.6 6.5E-15 4.8E-19 139.6 12.7 202 208-454 25-235 (284)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 5.2E-14 3.8E-18 126.9 17.0 161 165-349 49-209 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.5 1.3E-13 9.4E-18 123.2 16.6 157 165-345 43-199 (199)
18 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 8.6E-14 6.3E-18 132.0 15.3 213 191-454 18-235 (284)
19 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 1.8E-13 1.3E-17 129.8 17.0 172 166-354 15-191 (284)
20 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 6.1E-13 4.5E-17 130.0 20.5 297 166-512 42-352 (353)
21 d1dcea3 c.10.2.2 (A:444-567) R 99.4 3.7E-13 2.7E-17 109.7 11.3 97 188-286 2-100 (124)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 5.7E-13 4.1E-17 108.6 11.3 103 209-315 1-104 (124)
23 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 7.5E-13 5.5E-17 122.2 13.4 103 209-314 11-116 (242)
24 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 4.5E-13 3.2E-17 123.8 11.5 104 188-293 12-119 (242)
25 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 3.1E-13 2.2E-17 115.9 8.9 115 197-314 9-125 (162)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 4.2E-13 3E-17 115.1 8.4 131 177-310 11-148 (162)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 2.1E-11 1.5E-15 107.8 11.4 126 187-314 11-139 (192)
28 d2a5yb3 c.37.1.20 (B:109-385) 99.2 2.6E-12 1.9E-16 120.4 4.2 74 3-84 203-276 (277)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 2.9E-10 2.1E-14 100.3 11.1 120 167-287 13-137 (192)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 8.1E-12 5.9E-16 110.8 -1.3 109 202-314 44-153 (198)
31 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.0 6.7E-11 4.9E-15 119.4 5.4 322 184-518 2-410 (460)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 2.3E-12 1.7E-16 114.4 -5.0 128 180-309 44-182 (198)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 6.4E-09 4.6E-13 87.8 10.6 85 202-286 27-113 (156)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.8 9.8E-10 7.1E-14 110.7 6.0 323 180-515 23-437 (460)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 1.4E-08 1E-12 85.6 11.4 107 204-313 6-115 (156)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 8.1E-09 5.9E-13 99.8 8.0 83 204-286 29-131 (344)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 8.3E-09 6.1E-13 99.8 7.0 161 181-352 28-227 (344)
38 d1koha1 c.10.2.3 (A:201-362) m 97.7 2.7E-06 1.9E-10 71.7 1.1 85 224-308 59-153 (162)
39 d1koha1 c.10.2.3 (A:201-362) m 97.4 2.1E-05 1.5E-09 66.0 2.0 80 203-282 62-152 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.6 0.0019 1.4E-07 53.7 6.9 20 332-351 123-142 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.4 0.0018 1.3E-07 53.9 5.7 108 204-312 13-142 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 95.8 0.0056 4.1E-07 50.7 5.7 21 332-352 124-144 (166)
43 d1io0a_ c.10.1.1 (A:) Tropomod 95.8 0.0013 9.7E-08 54.7 1.7 15 228-242 44-58 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=1.6e-20 Score=187.79 Aligned_cols=284 Identities=18% Similarity=0.235 Sum_probs=159.9
Q ss_pred cccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCC
Q 046723 183 WEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSE 262 (562)
Q Consensus 183 ~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~ 262 (562)
+.+++.|++.++.++.++++..+++|++|++++|.++++++ ++.+++|++|++++|.+..++. ++++++|++|++.+
T Consensus 43 l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~~ 119 (384)
T d2omza2 43 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFN 119 (384)
T ss_dssp HTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCS
T ss_pred hCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCcc--ccCCcccccccccccccccccc-cccccccccccccc
Confidence 45677788888777777777777888888888888777764 7778888888888887776653 77778888888777
Q ss_pred CCccccchhhhCCCCCcEEeccCc-----------------------------------------CCCCccchhhhcCCC
Q 046723 263 SDIEELPGELKALVNLKCLDLEYT-----------------------------------------GNLITIPRQLISNLS 301 (562)
Q Consensus 263 ~~l~~lp~~~~~l~~L~~L~l~~~-----------------------------------------~~l~~~p~~~~~~l~ 301 (562)
+.+..++... ....+.......+ ......... ...++
T Consensus 120 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 197 (384)
T d2omza2 120 NQITDIDPLK-NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV-LAKLT 197 (384)
T ss_dssp SCCCCCGGGT-TCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCT
T ss_pred cccccccccc-ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccc-ccccc
Confidence 6655443211 1111111111100 000111111 45566
Q ss_pred CCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeEEEecccchHHHHhhhhhhccccceeeccccCCCc
Q 046723 302 RLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISLTLRNSHGLQSFLRSWKLRRCTRALLLQCFNDSTL 381 (562)
Q Consensus 302 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~ 381 (562)
+++.+.+.++.... .......++|+.|+++++....++.+ ...++|+.|++.++.....
T Consensus 198 ~~~~l~l~~n~i~~-----------------~~~~~~~~~L~~L~l~~n~l~~~~~l----~~l~~L~~L~l~~n~l~~~ 256 (384)
T d2omza2 198 NLESLIATNNQISD-----------------ITPLGILTNLDELSLNGNQLKDIGTL----ASLTNLTDLDLANNQISNL 256 (384)
T ss_dssp TCSEEECCSSCCCC-----------------CGGGGGCTTCCEEECCSSCCCCCGGG----GGCTTCSEEECCSSCCCCC
T ss_pred ccceeeccCCccCC-----------------CCcccccCCCCEEECCCCCCCCcchh----hcccccchhccccCccCCC
Confidence 77777776665432 12234455666666666655554322 1223666666666543322
Q ss_pred cchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCCCCccccccCCCceEEEecCcchhhhh
Q 046723 382 LEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKDLTFLVFAPNLKSIKVGICHAMEEIA 461 (562)
Q Consensus 382 ~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~l~~l~~l~~L~~L~L~~c~~l~~l~ 461 (562)
. .+..+++|+.|+++++ .+..++. +. .++.++.+.+.++ .+..++.+..+++++.|+++++. +++++
T Consensus 257 ~---~~~~~~~L~~L~l~~~-~l~~~~~-~~------~~~~l~~l~~~~n-~l~~~~~~~~~~~l~~L~ls~n~-l~~l~ 323 (384)
T d2omza2 257 A---PLSGLTKLTELKLGAN-QISNISP-LA------GLTALTNLELNEN-QLEDISPISNLKNLTYLTLYFNN-ISDIS 323 (384)
T ss_dssp G---GGTTCTTCSEEECCSS-CCCCCGG-GT------TCTTCSEEECCSS-CCSCCGGGGGCTTCSEEECCSSC-CSCCG
T ss_pred C---cccccccCCEeeccCc-ccCCCCc-cc------ccccccccccccc-ccccccccchhcccCeEECCCCC-CCCCc
Confidence 2 2555666777777655 3333321 11 1555666666665 45555556666666666666542 33331
Q ss_pred cCCCCCCccccccCCCCccccceeeccCCcCCcccCcCCCCCCCcceeeeccCCCCcccc
Q 046723 462 SEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKPLPFPHLKAMSFLHCKKLKKLP 521 (562)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~L~~L~i~~C~~L~~lp 521 (562)
.+..+++|++|++++| .++.++ ....+++|++|++++| +++.+|
T Consensus 324 -------------~l~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L~~L~l~~N-~l~~l~ 367 (384)
T d2omza2 324 -------------PVSSLTKLQRLFFANN-KVSDVS-SLANLTNINWLSAGHN-QISDLT 367 (384)
T ss_dssp -------------GGGGCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECCSS-CCCBCG
T ss_pred -------------ccccCCCCCEEECCCC-CCCCCh-hHcCCCCCCEEECCCC-cCCCCh
Confidence 1344666666666665 455443 2334566666666655 455554
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.82 E-value=3e-19 Score=178.37 Aligned_cols=294 Identities=16% Similarity=0.219 Sum_probs=214.7
Q ss_pred cEEEeeccccccCCCccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcc
Q 046723 165 NFFVYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTK 244 (562)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~ 244 (562)
+.+...+.++..+..+..++++++|++++|.++.++.+.++++|++|++++|.+..+++ ++.+++|+.|+++++.++.
T Consensus 47 ~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~~~~~~~~~ 124 (384)
T d2omza2 47 TTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD 124 (384)
T ss_dssp CEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc--ccccccccccccccccccc
Confidence 45666666676677788889999999999999999999999999999999999998865 8899999999999987765
Q ss_pred cCcccCCcccCcEEeCCCCC------------------------------------------ccccchhhhCCCCCcEEe
Q 046723 245 LPVGISELVSLQHLDLSESD------------------------------------------IEELPGELKALVNLKCLD 282 (562)
Q Consensus 245 lp~~~~~l~~L~~L~l~~~~------------------------------------------l~~lp~~~~~l~~L~~L~ 282 (562)
++... ....+..+....+. ....+.....+++++.++
T Consensus 125 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 203 (384)
T d2omza2 125 IDPLK-NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLI 203 (384)
T ss_dssp CGGGT-TCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEE
T ss_pred ccccc-ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceee
Confidence 53321 11222222211110 111223466778899999
Q ss_pred ccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeEEEecccchHHHHhhh
Q 046723 283 LEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISLTLRNSHGLQSFLRSW 362 (562)
Q Consensus 283 l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~l~~~~ 362 (562)
+++| .+..++. ....++|++|++.+|.... +..+..+++|+.+++..+...++..+.
T Consensus 204 l~~n-~i~~~~~--~~~~~~L~~L~l~~n~l~~-----------------~~~l~~l~~L~~L~l~~n~l~~~~~~~--- 260 (384)
T d2omza2 204 ATNN-QISDITP--LGILTNLDELSLNGNQLKD-----------------IGTLASLTNLTDLDLANNQISNLAPLS--- 260 (384)
T ss_dssp CCSS-CCCCCGG--GGGCTTCCEEECCSSCCCC-----------------CGGGGGCTTCSEEECCSSCCCCCGGGT---
T ss_pred ccCC-ccCCCCc--ccccCCCCEEECCCCCCCC-----------------cchhhcccccchhccccCccCCCCccc---
Confidence 9987 5666654 5678899999999887652 345777888898888888777665432
Q ss_pred hhhccccceeeccccCCCccchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCCCCccccc
Q 046723 363 KLRRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKDLTFLVF 442 (562)
Q Consensus 363 ~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~l~~l~~ 442 (562)
..++|++|.++++......+ +..++.++.+.+..+ .+..+.. . ..+++++.|+++++ ++++++.+..
T Consensus 261 -~~~~L~~L~l~~~~l~~~~~---~~~~~~l~~l~~~~n-~l~~~~~-~------~~~~~l~~L~ls~n-~l~~l~~l~~ 327 (384)
T d2omza2 261 -GLTKLTELKLGANQISNISP---LAGLTALTNLELNEN-QLEDISP-I------SNLKNLTYLTLYFN-NISDISPVSS 327 (384)
T ss_dssp -TCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSS-CCSCCGG-G------GGCTTCSEEECCSS-CCSCCGGGGG
T ss_pred -ccccCCEeeccCcccCCCCc---ccccccccccccccc-ccccccc-c------chhcccCeEECCCC-CCCCCccccc
Confidence 23488999988765443333 667788888888776 4544322 2 23789999999998 7888888889
Q ss_pred cCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCcccCcCCCCCCCcceeeecc
Q 046723 443 APNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKPLPFPHLKAMSFLH 513 (562)
Q Consensus 443 l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~L~~L~i~~ 513 (562)
+|+|++|++++| .++.++ .+..+++|++|+++++ +++.++. ...+++|+.|++++
T Consensus 328 l~~L~~L~L~~n-~l~~l~-------------~l~~l~~L~~L~l~~N-~l~~l~~-l~~l~~L~~L~L~~ 382 (384)
T d2omza2 328 LTKLQRLFFANN-KVSDVS-------------SLANLTNINWLSAGHN-QISDLTP-LANLTRITQLGLND 382 (384)
T ss_dssp CTTCCEEECCSS-CCCCCG-------------GGGGCTTCCEEECCSS-CCCBCGG-GTTCTTCSEEECCC
T ss_pred CCCCCEEECCCC-CCCCCh-------------hHcCCCCCCEEECCCC-cCCCChh-hccCCCCCEeeCCC
Confidence 999999999988 455542 2456899999999886 5776653 45678999998875
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.80 E-value=1.6e-18 Score=167.29 Aligned_cols=285 Identities=16% Similarity=0.194 Sum_probs=189.8
Q ss_pred eEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCccc-CcccCCcccCcEEeCCCCCc
Q 046723 187 RRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKL-PVGISELVSLQHLDLSESDI 265 (562)
Q Consensus 187 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~l-p~~~~~l~~L~~L~l~~~~l 265 (562)
+.++-++..++.+|.- -.+++++|++++|.++.+++..|..+++|++|++++|.+..+ |..|.++++|++|++++|++
T Consensus 13 ~~~~C~~~~L~~lP~~-l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l 91 (305)
T d1xkua_ 13 RVVQCSDLGLEKVPKD-LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91 (305)
T ss_dssp TEEECTTSCCCSCCCS-CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEecCCCCCccCCC-CCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCcc
Confidence 3444455556666541 136788888888888888776678888888888888887776 55678888888888888888
Q ss_pred cccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCcccccee
Q 046723 266 EELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVI 345 (562)
Q Consensus 266 ~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L 345 (562)
+.+|..+ ...++.|++.++ .+..++...+.....++.+....+.... .......+..+++|+.+
T Consensus 92 ~~l~~~~--~~~l~~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~~n~~~~-------------~~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 92 KELPEKM--PKTLQELRVHEN-EITKVRKSVFNGLNQMIVVELGTNPLKS-------------SGIENGAFQGMKKLSYI 155 (305)
T ss_dssp SBCCSSC--CTTCCEEECCSS-CCCBBCHHHHTTCTTCCEEECCSSCCCG-------------GGBCTTGGGGCTTCCEE
T ss_pred CcCccch--hhhhhhhhcccc-chhhhhhhhhhccccccccccccccccc-------------cCCCccccccccccCcc
Confidence 8887643 457788888776 5666666656667777777776664332 12233456667777777
Q ss_pred eEEEecccchHHHHhhhhhhccccceeeccccCCCccchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccE
Q 046723 346 SLTLRNSHGLQSFLRSWKLRRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNM 425 (562)
Q Consensus 346 ~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~ 425 (562)
++..+....++.. ...+|++|++.++......+ ..+..++.++.|.++++ .+..++..... .+++|++
T Consensus 156 ~l~~n~l~~l~~~-----~~~~L~~L~l~~n~~~~~~~-~~~~~~~~l~~L~~s~n-~l~~~~~~~~~-----~l~~L~~ 223 (305)
T d1xkua_ 156 RIADTNITTIPQG-----LPPSLTELHLDGNKITKVDA-ASLKGLNNLAKLGLSFN-SISAVDNGSLA-----NTPHLRE 223 (305)
T ss_dssp ECCSSCCCSCCSS-----CCTTCSEEECTTSCCCEECT-GGGTTCTTCCEEECCSS-CCCEECTTTGG-----GSTTCCE
T ss_pred ccccCCccccCcc-----cCCccCEEECCCCcCCCCCh-hHhhccccccccccccc-ccccccccccc-----cccccee
Confidence 7776655544321 22378888888765544433 34677788888888877 66666554443 2788999
Q ss_pred EEEecCCCCCCCc-cccccCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCcccCcCCCCCC
Q 046723 426 VEICNCIKLKDLT-FLVFAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKPLPFP 504 (562)
Q Consensus 426 L~L~~c~~l~~l~-~l~~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~ 504 (562)
|+|++| +++.+| .+..+++|++|+|+++ .++.+....+.. .......++|+.|+|++++ ++.+...+.+|+
T Consensus 224 L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~-----~~~~~~~~~L~~L~L~~N~-~~~~~~~~~~f~ 295 (305)
T d1xkua_ 224 LHLNNN-KLVKVPGGLADHKYIQVVYLHNN-NISAIGSNDFCP-----PGYNTKKASYSGVSLFSNP-VQYWEIQPSTFR 295 (305)
T ss_dssp EECCSS-CCSSCCTTTTTCSSCCEEECCSS-CCCCCCTTSSSC-----SSCCTTSCCCSEEECCSSS-SCGGGSCGGGGT
T ss_pred eecccc-cccccccccccccCCCEEECCCC-ccCccChhhccC-----cchhcccCCCCEEECCCCc-CccCcCCHhHhc
Confidence 999888 677764 4778889999999885 466664322211 1123456778888888765 555555555666
Q ss_pred Ccce
Q 046723 505 HLKA 508 (562)
Q Consensus 505 ~L~~ 508 (562)
.++.
T Consensus 296 ~~~~ 299 (305)
T d1xkua_ 296 CVYV 299 (305)
T ss_dssp TCCC
T ss_pred cccc
Confidence 5543
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.72 E-value=1.7e-16 Score=152.87 Aligned_cols=262 Identities=17% Similarity=0.218 Sum_probs=155.0
Q ss_pred cccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCc-ccCCcccCcEEeCCCCCcccc-chhhhCCCCCcEEecc
Q 046723 207 HLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPV-GISELVSLQHLDLSESDIEEL-PGELKALVNLKCLDLE 284 (562)
Q Consensus 207 ~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~-~~~~l~~L~~L~l~~~~l~~l-p~~~~~l~~L~~L~l~ 284 (562)
.+++++-++..++.+|.. + .+++++|++++|+++.+|+ .|.++++|++|+++++.+..+ |..+.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~~lP~~-l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKD-L--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCCSCCCS-C--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCCccCCC-C--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 677888888889999876 3 3689999999999999986 689999999999999999877 4568899999999999
Q ss_pred CcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeEEEecccchHHHHhhhhh
Q 046723 285 YTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISLTLRNSHGLQSFLRSWKL 364 (562)
Q Consensus 285 ~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~ 364 (562)
+| .+..+|.. ....++.|...++..... ....+.....+..+....+..............
T Consensus 88 ~n-~l~~l~~~---~~~~l~~L~~~~n~l~~l---------------~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~ 148 (305)
T d1xkua_ 88 KN-QLKELPEK---MPKTLQELRVHENEITKV---------------RKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 148 (305)
T ss_dssp SS-CCSBCCSS---CCTTCCEEECCSSCCCBB---------------CHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG
T ss_pred CC-ccCcCccc---hhhhhhhhhccccchhhh---------------hhhhhhccccccccccccccccccCCCcccccc
Confidence 98 68888864 356788888888765431 112233334444444333222222111111222
Q ss_pred hccccceeeccccCCCccchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCCCC--ccccc
Q 046723 365 RRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKDL--TFLVF 442 (562)
Q Consensus 365 ~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~l--~~l~~ 442 (562)
..+|+.+.+.++.... .+ ...+++|+.|++.++......+..+.. +++++.|+++++ .+..+ .++..
T Consensus 149 l~~L~~l~l~~n~l~~-l~---~~~~~~L~~L~l~~n~~~~~~~~~~~~------~~~l~~L~~s~n-~l~~~~~~~~~~ 217 (305)
T d1xkua_ 149 MKKLSYIRIADTNITT-IP---QGLPPSLTELHLDGNKITKVDAASLKG------LNNLAKLGLSFN-SISAVDNGSLAN 217 (305)
T ss_dssp CTTCCEEECCSSCCCS-CC---SSCCTTCSEEECTTSCCCEECTGGGTT------CTTCCEEECCSS-CCCEECTTTGGG
T ss_pred ccccCccccccCCccc-cC---cccCCccCEEECCCCcCCCCChhHhhc------cccccccccccc-cccccccccccc
Confidence 2355555555543222 11 122456666666655322222222221 455666666666 44442 23455
Q ss_pred cCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCcccCcCC-------CCCCCcceeeeccCC
Q 046723 443 APNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKP-------LPFPHLKAMSFLHCK 515 (562)
Q Consensus 443 l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~-------~~~~~L~~L~i~~C~ 515 (562)
+++|++|+|++| .++.+|. .+..+++|+.|+++++ +++.++... ...++|+.|++.+.+
T Consensus 218 l~~L~~L~L~~N-~L~~lp~------------~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 218 TPHLRELHLNNN-KLVKVPG------------GLADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp STTCCEEECCSS-CCSSCCT------------TTTTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred cccceeeecccc-ccccccc------------ccccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 666666666665 3444432 3445666666666664 355443211 123556666666544
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.69 E-value=2.4e-17 Score=159.47 Aligned_cols=86 Identities=17% Similarity=0.143 Sum_probs=46.7
Q ss_pred hhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCC-CC-ccccccCCCceEEEecCcchhhhhcCC
Q 046723 387 LAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLK-DL-TFLVFAPNLKSIKVGICHAMEEIASEG 464 (562)
Q Consensus 387 l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~-~l-~~l~~l~~L~~L~L~~c~~l~~l~~~~ 464 (562)
+..+++++.+.+.++ .+...+..... +++|+.|+++++ +++ .+ ..++.+++|++|+|+++..-..+|.
T Consensus 217 ~~~~~~l~~l~~~~~-~l~~~~~~~~~------~~~L~~L~Ls~N-~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-- 286 (313)
T d1ogqa_ 217 FGSDKNTQKIHLAKN-SLAFDLGKVGL------SKNLNGLDLRNN-RIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-- 286 (313)
T ss_dssp CCTTSCCSEEECCSS-EECCBGGGCCC------CTTCCEEECCSS-CCEECCCGGGGGCTTCCEEECCSSEEEEECCC--
T ss_pred ccccccccccccccc-ccccccccccc------ccccccccCccC-eecccCChHHhCCCCCCEEECcCCcccccCCC--
Confidence 445566777776665 33322222222 567777777777 444 33 3467777777777777543223321
Q ss_pred CCCCccccccCCCCccccceeeccCCcCC
Q 046723 465 KFAEVPEVMANLNPFEKLQNLEVAGARNL 493 (562)
Q Consensus 465 ~~~~~~~~~~~~~~~~~L~~L~l~~c~~L 493 (562)
...+++|+.+++.+.+.+
T Consensus 287 -----------~~~L~~L~~l~l~~N~~l 304 (313)
T d1ogqa_ 287 -----------GGNLQRFDVSAYANNKCL 304 (313)
T ss_dssp -----------STTGGGSCGGGTCSSSEE
T ss_pred -----------cccCCCCCHHHhCCCccc
Confidence 234556666666655433
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.67 E-value=4.3e-17 Score=157.71 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=179.2
Q ss_pred ccccEEEccccCccc---cchhhhcCCCCCcEEEecC-CCCc-ccCcccCCcccCcEEeCCCCCcccc-chhhhCCCCCc
Q 046723 206 PHLLTLFLNENNLRK---IHNDFFQFMPSLKVLNLSH-CELT-KLPVGISELVSLQHLDLSESDIEEL-PGELKALVNLK 279 (562)
Q Consensus 206 ~~L~~L~l~~~~l~~---~~~~~~~~l~~L~~L~l~~-~~~~-~lp~~~~~l~~L~~L~l~~~~l~~l-p~~~~~l~~L~ 279 (562)
.+++.|+++++.+.. +|+. ++.+++|++|++++ |+++ .+|..|+++++|++|++++|++..+ |..+..+.+|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~-l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGG-GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCChH-HhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhc
Confidence 468889999988874 4554 88999999999987 5776 7899999999999999999988854 45588899999
Q ss_pred EEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCcccc-ceeeEEEecccchHHH
Q 046723 280 CLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHL-EVISLTLRNSHGLQSF 358 (562)
Q Consensus 280 ~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L-~~L~l~~~~~~~~~~l 358 (562)
++++++|.....+|.. ++++++|+++++.+|.... ..+..+..+..+ +.+.+..+...+.
T Consensus 129 ~l~l~~N~~~~~~p~~-l~~l~~L~~l~l~~n~l~~---------------~ip~~~~~l~~l~~~l~~~~n~l~~~--- 189 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPS-ISSLPNLVGITFDGNRISG---------------AIPDSYGSFSKLFTSMTISRNRLTGK--- 189 (313)
T ss_dssp EEECCSSEEESCCCGG-GGGCTTCCEEECCSSCCEE---------------ECCGGGGCCCTTCCEEECCSSEEEEE---
T ss_pred ccccccccccccCchh-hccCcccceeecccccccc---------------cccccccccccccccccccccccccc---
Confidence 9999998777777776 8899999999999887652 234455555554 3333332221111
Q ss_pred HhhhhhhccccceeeccccCCCccchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCCCCc
Q 046723 359 LRSWKLRRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKDLT 438 (562)
Q Consensus 359 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~l~ 438 (562)
....+..+ ....+.+..+.....++..... +++|+.+++.++.....++
T Consensus 190 ------------------------~~~~~~~l-~~~~l~l~~~~~~~~~~~~~~~------~~~l~~l~~~~~~l~~~~~ 238 (313)
T d1ogqa_ 190 ------------------------IPPTFANL-NLAFVDLSRNMLEGDASVLFGS------DKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp ------------------------CCGGGGGC-CCSEEECCSSEEEECCGGGCCT------TSCCSEEECCSSEECCBGG
T ss_pred ------------------------cccccccc-cccccccccccccccccccccc------ccccccccccccccccccc
Confidence 00112333 2334566555333333333333 7899999999995444567
Q ss_pred cccccCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCc-ccCcCCCCCCCcceeeeccCCCC
Q 046723 439 FLVFAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLK-SIYWKPLPFPHLKAMSFLHCKKL 517 (562)
Q Consensus 439 ~l~~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~-~~~~~~~~~~~L~~L~i~~C~~L 517 (562)
.++.+++|+.|+++++.....+|. .+..+++|++|+++++. +. .+|. .+.+++|+.+.+.+.+.|
T Consensus 239 ~~~~~~~L~~L~Ls~N~l~g~iP~------------~l~~L~~L~~L~Ls~N~-l~g~iP~-~~~L~~L~~l~l~~N~~l 304 (313)
T d1ogqa_ 239 KVGLSKNLNGLDLRNNRIYGTLPQ------------GLTQLKFLHSLNVSFNN-LCGEIPQ-GGNLQRFDVSAYANNKCL 304 (313)
T ss_dssp GCCCCTTCCEEECCSSCCEECCCG------------GGGGCTTCCEEECCSSE-EEEECCC-STTGGGSCGGGTCSSSEE
T ss_pred ccccccccccccCccCeecccCCh------------HHhCCCCCCEEECcCCc-ccccCCC-cccCCCCCHHHhCCCccc
Confidence 788899999999999765435544 56789999999999963 54 5553 356788999999988877
Q ss_pred ccccC
Q 046723 518 KKLPL 522 (562)
Q Consensus 518 ~~lp~ 522 (562)
...|.
T Consensus 305 ~g~pl 309 (313)
T d1ogqa_ 305 CGSPL 309 (313)
T ss_dssp ESTTS
T ss_pred cCCCC
Confidence 76654
No 7
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64 E-value=4.8e-16 Score=142.65 Aligned_cols=118 Identities=21% Similarity=0.313 Sum_probs=58.2
Q ss_pred eEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCcc
Q 046723 187 RRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIE 266 (562)
Q Consensus 187 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~ 266 (562)
..+.+..+.+.++.....+.+|+.|.+.++.++++.. ++.+++|++|++++|.++.++. +..+++|++++++++.++
T Consensus 22 ~~~~l~~~~~~d~~~~~~l~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~~ 98 (227)
T d1h6ua2 22 IKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLK 98 (227)
T ss_dssp HHHHTTCSSTTSEECHHHHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCS
T ss_pred HHHHhCCCCcCCcCCHHHcCCcCEEECCCCCCCcchh--HhcCCCCcEeecCCceeecccc-cccccccccccccccccc
Confidence 3344444444444333445555555555555555532 4555555555555555554432 555555555555555555
Q ss_pred ccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCC
Q 046723 267 ELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGA 311 (562)
Q Consensus 267 ~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~ 311 (562)
.++ .+..+++|+.++++++. ...++. +...+.++.+.+.++
T Consensus 99 ~i~-~l~~l~~L~~l~l~~~~-~~~~~~--~~~~~~~~~l~~~~~ 139 (227)
T d1h6ua2 99 NVS-AIAGLQSIKTLDLTSTQ-ITDVTP--LAGLSNLQVLYLDLN 139 (227)
T ss_dssp CCG-GGTTCTTCCEEECTTSC-CCCCGG--GTTCTTCCEEECCSS
T ss_pred ccc-ccccccccccccccccc-ccccch--hccccchhhhhchhh
Confidence 443 34455555555555542 222222 334444555544443
No 8
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.63 E-value=4.3e-15 Score=145.70 Aligned_cols=62 Identities=18% Similarity=0.188 Sum_probs=48.3
Q ss_pred ccCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCcccCcCCCCCCCcceeeeccCCCCcccc
Q 046723 442 FAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKPLPFPHLKAMSFLHCKKLKKLP 521 (562)
Q Consensus 442 ~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~L~~L~i~~C~~L~~lp 521 (562)
.+++|++|+|++|. ++.+|. .+++|+.|++++| ++++++. .+++|++|++++|+ |+++|
T Consensus 282 ~~~~L~~L~Ls~N~-l~~lp~---------------~~~~L~~L~L~~N-~L~~l~~---~~~~L~~L~L~~N~-L~~lp 340 (353)
T d1jl5a_ 282 LPPSLEELNVSNNK-LIELPA---------------LPPRLERLIASFN-HLAEVPE---LPQNLKQLHVEYNP-LREFP 340 (353)
T ss_dssp CCTTCCEEECCSSC-CSCCCC---------------CCTTCCEEECCSS-CCSCCCC---CCTTCCEEECCSSC-CSSCC
T ss_pred cCCCCCEEECCCCc-cCcccc---------------ccCCCCEEECCCC-cCCcccc---ccCCCCEEECcCCc-CCCCC
Confidence 46899999999874 555432 4789999999887 5777764 35789999999996 99999
Q ss_pred CCC
Q 046723 522 LDS 524 (562)
Q Consensus 522 ~~~ 524 (562)
...
T Consensus 341 ~~~ 343 (353)
T d1jl5a_ 341 DIP 343 (353)
T ss_dssp CCC
T ss_pred ccc
Confidence 644
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.7e-15 Score=141.12 Aligned_cols=126 Identities=29% Similarity=0.360 Sum_probs=94.2
Q ss_pred cceEEeccccccccCCC-CCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCC
Q 046723 185 KARRLSLMQNQIRNLSE-IPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSES 263 (562)
Q Consensus 185 ~l~~L~l~~~~~~~l~~-~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~ 263 (562)
....++-.++.++.+|. +. +++++|+|++|.++.+++..|..+++|++|++++|+++.+|. ++.+++|++|++++|
T Consensus 11 ~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N 87 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHN 87 (266)
T ss_dssp TCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSS
T ss_pred CCeEEEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-ccccccccccccccc
Confidence 34445666666776653 22 578888888888888887778888888888888888887754 567888888888888
Q ss_pred CccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCcc
Q 046723 264 DIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHK 314 (562)
Q Consensus 264 ~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~ 314 (562)
+++..+..+..+++|+.|+++++ ....++...+..+.++++|.+.+|...
T Consensus 88 ~l~~~~~~~~~l~~L~~L~l~~~-~~~~~~~~~~~~l~~l~~L~l~~n~l~ 137 (266)
T d1p9ag_ 88 QLQSLPLLGQTLPALTVLDVSFN-RLTSLPLGALRGLGELQELYLKGNELK 137 (266)
T ss_dssp CCSSCCCCTTTCTTCCEEECCSS-CCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccccccccc-ccceeeccccccccccccccccccccc
Confidence 88877777888888888888877 455555555677788888888777554
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=5.5e-15 Score=133.49 Aligned_cols=148 Identities=23% Similarity=0.351 Sum_probs=107.7
Q ss_pred cccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCC
Q 046723 183 WEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSE 262 (562)
Q Consensus 183 ~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~ 262 (562)
+.+++.|++.++.++.++++..+++|++|++++|.++++++ ++.+++|++|++++|+++.+| .+..+++|+.|++.+
T Consensus 45 L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~ 121 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEH 121 (210)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTT
T ss_pred hcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccccc-ccccccccccccccc
Confidence 45778888888888888777788888888888888877764 677888888888888887776 477788888888888
Q ss_pred CCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCcccc
Q 046723 263 SDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHL 342 (562)
Q Consensus 263 ~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L 342 (562)
+.+..++ .+..+++++.+++++| .+...+. +.++++|+++++.+|.... +..+.++++|
T Consensus 122 ~~~~~~~-~l~~l~~l~~l~~~~n-~l~~~~~--~~~l~~L~~l~l~~n~l~~-----------------i~~l~~l~~L 180 (210)
T d1h6ta2 122 NGISDIN-GLVHLPQLESLYLGNN-KITDITV--LSRLTKLDTLSLEDNQISD-----------------IVPLAGLTKL 180 (210)
T ss_dssp SCCCCCG-GGGGCTTCCEEECCSS-CCCCCGG--GGGCTTCSEEECCSSCCCC-----------------CGGGTTCTTC
T ss_pred ccccccc-cccccccccccccccc-ccccccc--ccccccccccccccccccc-----------------cccccCCCCC
Confidence 8777665 5677788888888876 4555443 5678888888888776542 2345666666
Q ss_pred ceeeEEEecccc
Q 046723 343 EVISLTLRNSHG 354 (562)
Q Consensus 343 ~~L~l~~~~~~~ 354 (562)
+.|+++++....
T Consensus 181 ~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 181 QNLYLSKNHISD 192 (210)
T ss_dssp CEEECCSSCCCB
T ss_pred CEEECCCCCCCC
Confidence 666665544433
No 11
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=8.3e-16 Score=145.93 Aligned_cols=251 Identities=20% Similarity=0.212 Sum_probs=136.1
Q ss_pred cEEEccccCcc-ccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCcc--ccchhhhCCCCCcEEeccC
Q 046723 209 LTLFLNENNLR-KIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIE--ELPGELKALVNLKCLDLEY 285 (562)
Q Consensus 209 ~~L~l~~~~l~-~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~--~lp~~~~~l~~L~~L~l~~ 285 (562)
+.++++++.+. +.....+. ..+..+.+..+.+...........+|++|++++|.+. .++..+.++++|++|++++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh--ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46777766553 11112121 2345566655544333333445668888888888765 3555677888888888888
Q ss_pred cCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeEEEecccchHHHHhhhhhh
Q 046723 286 TGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISLTLRNSHGLQSFLRSWKLR 365 (562)
Q Consensus 286 ~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~~ 365 (562)
|..-...+.. ++++++|++|++++|.... +.....-...++
T Consensus 81 ~~l~~~~~~~-l~~~~~L~~L~Ls~c~~it-------------d~~l~~l~~~~~------------------------- 121 (284)
T d2astb2 81 LRLSDPIVNT-LAKNSNLVRLNLSGCSGFS-------------EFALQTLLSSCS------------------------- 121 (284)
T ss_dssp CBCCHHHHHH-HTTCTTCSEEECTTCBSCC-------------HHHHHHHHHHCT-------------------------
T ss_pred cCCCcHHHHH-HhcCCCCcCcccccccccc-------------ccccchhhHHHH-------------------------
Confidence 8433333333 6778888888888764321 111111122334
Q ss_pred ccccceeeccccCCCccchh-hhh-hhcccCeeeecccc-ccceeeccchhhhhhhhhccccEEEEecCCCCCC--Cccc
Q 046723 366 RCTRALLLQCFNDSTLLEVS-ALA-YLKQLNRLQIANSV-ILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKD--LTFL 440 (562)
Q Consensus 366 ~~L~~L~l~~~~~~~~~~~~-~l~-~l~~L~~L~l~~~~-~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~--l~~l 440 (562)
+|++|++++|.......+. .+. ..++|+.|.+.+|. .+.+...... ...+++|++|++++|..+++ +..+
T Consensus 122 -~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l----~~~~~~L~~L~L~~~~~itd~~~~~l 196 (284)
T d2astb2 122 -RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL----VRRCPNLVHLDLSDSVMLKNDCFQEF 196 (284)
T ss_dssp -TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH----HHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred -hccccccccccccccccchhhhcccccccchhhhccccccccccccccc----ccccccccccccccccCCCchhhhhh
Confidence 4555555555444333221 122 23567777776652 2221111100 02367788888877776664 4556
Q ss_pred cccCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCCcccCcCCCCCCCcceeeeccCCCCccc
Q 046723 441 VFAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNLKSIYWKPLPFPHLKAMSFLHCKKLKKL 520 (562)
Q Consensus 441 ~~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~L~~L~i~~C~~L~~l 520 (562)
..+++|++|+|++|..+.+-. ...+..+|+|+.|++.+|-.-..+......+|+|+ + +|.++..+
T Consensus 197 ~~~~~L~~L~L~~C~~i~~~~-----------l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~---i-~~~~ls~~ 261 (284)
T d2astb2 197 FQLNYLQHLSLSRCYDIIPET-----------LLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ---I-NCSHFTTI 261 (284)
T ss_dssp GGCTTCCEEECTTCTTCCGGG-----------GGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE---E-SCCCSCCT
T ss_pred cccCcCCEEECCCCCCCChHH-----------HHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc---c-cCccCCCC
Confidence 777888888888877655421 12344577888888877722111111112344544 3 56666654
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1.5e-14 Score=132.42 Aligned_cols=151 Identities=21% Similarity=0.325 Sum_probs=122.1
Q ss_pred ccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEe
Q 046723 180 VRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLD 259 (562)
Q Consensus 180 ~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~ 259 (562)
...+.+++.|++.++.++.++++..+++|++|++++|.++.+.+ +..+++|++++++++.++.++ .+..+++|+++.
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~ 113 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLD 113 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEE
T ss_pred HHHcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc--ccccccccccccccccccccc-cccccccccccc
Confidence 45567999999999999999999999999999999999988865 889999999999999988875 588999999999
Q ss_pred CCCCCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCc
Q 046723 260 LSESDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGL 339 (562)
Q Consensus 260 l~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 339 (562)
++++....++ .+...+.++.+.++++ .+...+. +.++++|++|.+.+|.... ...++++
T Consensus 114 l~~~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~~~--~~~~~~L~~L~l~~n~~~~-----------------~~~l~~l 172 (227)
T d1h6ua2 114 LTSTQITDVT-PLAGLSNLQVLYLDLN-QITNISP--LAGLTNLQYLSIGNAQVSD-----------------LTPLANL 172 (227)
T ss_dssp CTTSCCCCCG-GGTTCTTCCEEECCSS-CCCCCGG--GGGCTTCCEEECCSSCCCC-----------------CGGGTTC
T ss_pred cccccccccc-hhccccchhhhhchhh-hhchhhh--hcccccccccccccccccc-----------------chhhccc
Confidence 9999877664 4667889999999887 4444443 6788999999999886542 2345667
Q ss_pred cccceeeEEEecccc
Q 046723 340 KHLEVISLTLRNSHG 354 (562)
Q Consensus 340 ~~L~~L~l~~~~~~~ 354 (562)
++|+.|+++++...+
T Consensus 173 ~~L~~L~Ls~n~l~~ 187 (227)
T d1h6ua2 173 SKLTTLKADDNKISD 187 (227)
T ss_dssp TTCCEEECCSSCCCC
T ss_pred ccceecccCCCccCC
Confidence 777777666554443
No 13
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1.1e-14 Score=130.38 Aligned_cols=150 Identities=19% Similarity=0.317 Sum_probs=110.6
Q ss_pred ccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCC
Q 046723 182 GWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLS 261 (562)
Q Consensus 182 ~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~ 261 (562)
.+.+++.|++.++.++.++++..+++|++|++++|.++.+++ ++.+++|++|++++|.+..++ .+.++++|++|+++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLF 114 (199)
T ss_dssp HHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECC
T ss_pred HhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--ccCCccccccccccccccccc-cccccccccccccc
Confidence 456788888888888888878888888888888888887765 778888888888888777775 47788888888888
Q ss_pred CCCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCccc
Q 046723 262 ESDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKH 341 (562)
Q Consensus 262 ~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 341 (562)
++.+..++ .+..+++|+.|++++| .+..++. +..+++|+.|++.+|.... +..++++++
T Consensus 115 ~~~~~~~~-~~~~l~~L~~L~l~~n-~l~~~~~--l~~~~~L~~L~l~~n~l~~-----------------l~~l~~l~~ 173 (199)
T d2omxa2 115 NNQITDID-PLKNLTNLNRLELSSN-TISDISA--LSGLTSLQQLNFSSNQVTD-----------------LKPLANLTT 173 (199)
T ss_dssp SSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCSEEECCSSCCCC-----------------CGGGTTCTT
T ss_pred cccccccc-ccchhhhhHHhhhhhh-hhccccc--ccccccccccccccccccC-----------------CccccCCCC
Confidence 88776654 4677888888888877 4566653 6778888888888776542 234566666
Q ss_pred cceeeEEEecccch
Q 046723 342 LEVISLTLRNSHGL 355 (562)
Q Consensus 342 L~~L~l~~~~~~~~ 355 (562)
|+.|+++++...++
T Consensus 174 L~~L~ls~N~i~~i 187 (199)
T d2omxa2 174 LERLDISSNKVSDI 187 (199)
T ss_dssp CCEEECCSSCCCCC
T ss_pred CCEEECCCCCCCCC
Confidence 66666655544443
No 14
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=8.6e-15 Score=137.57 Aligned_cols=170 Identities=26% Similarity=0.294 Sum_probs=139.2
Q ss_pred EeeccccccCCCccccccceEEeccccccccCC--CCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCccc
Q 046723 168 VYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLS--EIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKL 245 (562)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~--~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~l 245 (562)
...+.++..+|..- .+++++|++++|.++.++ .+..+++|++|++++|.++.++. +..+++|++|++++|+++..
T Consensus 16 ~C~~~~L~~iP~~l-p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L~~L~Ls~N~l~~~ 92 (266)
T d1p9ag_ 16 NCDKRNLTALPPDL-PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSL 92 (266)
T ss_dssp ECTTSCCSSCCSCC-CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSC
T ss_pred EccCCCCCeeCcCc-CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--cccccccccccccccccccc
Confidence 34455556655321 257999999999999885 47899999999999999998875 67899999999999999999
Q ss_pred CcccCCcccCcEEeCCCCCccccch-hhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhccccccc
Q 046723 246 PVGISELVSLQHLDLSESDIEELPG-ELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSI 324 (562)
Q Consensus 246 p~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 324 (562)
+..+..+++|++|+++++.+..++. ....+.++++|++.+| .+..+|...+..+++|+.+++.+|.+..
T Consensus 93 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n-~l~~l~~~~~~~l~~l~~l~l~~N~l~~--------- 162 (266)
T d1p9ag_ 93 PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN-ELKTLPPGLLTPTPKLEKLSLANNNLTE--------- 162 (266)
T ss_dssp CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECTTSCCSC---------
T ss_pred ccccccccccccccccccccceeecccccccccccccccccc-ccceeccccccccccchhcccccccccc---------
Confidence 9999999999999999998887654 4678899999999998 7788888778889999999999997753
Q ss_pred ccCCcccchhhhcCccccceeeEEEecccchH
Q 046723 325 LFGGGELIVEELLGLKHLEVISLTLRNSHGLQ 356 (562)
Q Consensus 325 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~ 356 (562)
.....+..+++|+.|+++++....++
T Consensus 163 ------~~~~~~~~l~~L~~L~Ls~N~L~~lp 188 (266)
T d1p9ag_ 163 ------LPAGLLNGLENLDTLLLQENSLYTIP 188 (266)
T ss_dssp ------CCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------cCccccccccccceeecccCCCcccC
Confidence 23345677888888888877666554
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=6.5e-15 Score=139.62 Aligned_cols=202 Identities=17% Similarity=0.174 Sum_probs=119.6
Q ss_pred ccEEEccccCccccchhhhcCCCCCcEEEecCCCCc--ccCcccCCcccCcEEeCCCCCcc-ccchhhhCCCCCcEEecc
Q 046723 208 LLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELT--KLPVGISELVSLQHLDLSESDIE-ELPGELKALVNLKCLDLE 284 (562)
Q Consensus 208 L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~--~lp~~~~~l~~L~~L~l~~~~l~-~lp~~~~~l~~L~~L~l~ 284 (562)
+..+.+........... .....+|++||++++.++ .++..+..+++|++|++++|.+. ..+..++.+++|++|+++
T Consensus 25 ~~~lrl~~~~~~~~~~~-~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls 103 (284)
T d2astb2 25 VIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 103 (284)
T ss_dssp CSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEeeccccccccchhh-hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccc
Confidence 34445554443332222 335678999999999775 35566788999999999999876 556678899999999999
Q ss_pred CcCCCCccc-hhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcC-ccccceeeEEEecccchHHHHhhh
Q 046723 285 YTGNLITIP-RQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLG-LKHLEVISLTLRNSHGLQSFLRSW 362 (562)
Q Consensus 285 ~~~~l~~~p-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~~L~~L~l~~~~~~~~~~l~~~~ 362 (562)
+|..++... ..+..++++|++|++++|.... +......+.. .++|+.|+++
T Consensus 104 ~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~-------------~~~~~~~~~~~~~~L~~L~l~-------------- 156 (284)
T d2astb2 104 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFT-------------EKHVQVAVAHVSETITQLNLS-------------- 156 (284)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC-------------HHHHHHHHHHSCTTCCEEECC--------------
T ss_pred ccccccccccchhhHHHHhccccccccccccc-------------cccchhhhcccccccchhhhc--------------
Confidence 997766432 1224578999999999885431 1111112222 2445555444
Q ss_pred hhhccccceeecccc-CCCccchhhh-hhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEEecCCCCCC--Cc
Q 046723 363 KLRRCTRALLLQCFN-DSTLLEVSAL-AYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEICNCIKLKD--LT 438 (562)
Q Consensus 363 ~~~~~L~~L~l~~~~-~~~~~~~~~l-~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L~~c~~l~~--l~ 438 (562)
+|. ..+...+..+ ..+++|++|++.+|..+++....... .+++|++|++++|..+++ +.
T Consensus 157 ------------~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~-----~~~~L~~L~L~~C~~i~~~~l~ 219 (284)
T d2astb2 157 ------------GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-----QLNYLQHLSLSRCYDIIPETLL 219 (284)
T ss_dssp ------------SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG-----GCTTCCEEECTTCTTCCGGGGG
T ss_pred ------------ccccccccccccccccccccccccccccccCCCchhhhhhc-----ccCcCCEEECCCCCCCChHHHH
Confidence 332 1222222222 34556666666655444432221111 255666666666655554 33
Q ss_pred cccccCCCceEEEecC
Q 046723 439 FLVFAPNLKSIKVGIC 454 (562)
Q Consensus 439 ~l~~l~~L~~L~L~~c 454 (562)
.++.+|+|+.|++.+|
T Consensus 220 ~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 220 ELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGCTTCCEEECTTS
T ss_pred HHhcCCCCCEEeeeCC
Confidence 4556677777777665
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.55 E-value=5.2e-14 Score=126.95 Aligned_cols=161 Identities=24% Similarity=0.381 Sum_probs=138.4
Q ss_pred cEEEeeccccccCCCccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcc
Q 046723 165 NFFVYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTK 244 (562)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~ 244 (562)
..+...+..+.....+..+++++.|++++|.++.++.+..+++|++|++++|.+++++. +..+++|+.|+++++.+..
T Consensus 49 ~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~~--l~~l~~L~~L~l~~~~~~~ 126 (210)
T d1h6ta2 49 DQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISD 126 (210)
T ss_dssp CEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECTTSCCCC
T ss_pred cEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccccccCcccccccccccccccccc--ccccccccccccccccccc
Confidence 44566666666677778889999999999999999989999999999999999998864 8899999999999998877
Q ss_pred cCcccCCcccCcEEeCCCCCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhccccccc
Q 046723 245 LPVGISELVSLQHLDLSESDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSI 324 (562)
Q Consensus 245 lp~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 324 (562)
++ .+..+++++.++++++.++..+ .+..+++|+++++++| .+..++. ++++++|++|++++|.+..
T Consensus 127 ~~-~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n-~l~~i~~--l~~l~~L~~L~Ls~N~i~~--------- 192 (210)
T d1h6ta2 127 IN-GLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDN-QISDIVP--LAGLTKLQNLYLSKNHISD--------- 192 (210)
T ss_dssp CG-GGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCCB---------
T ss_pred cc-cccccccccccccccccccccc-cccccccccccccccc-ccccccc--ccCCCCCCEEECCCCCCCC---------
Confidence 74 5888999999999999988765 5778999999999998 5677765 8899999999999997652
Q ss_pred ccCCcccchhhhcCccccceeeEEE
Q 046723 325 LFGGGELIVEELLGLKHLEVISLTL 349 (562)
Q Consensus 325 ~~~~~~~~~~~l~~l~~L~~L~l~~ 349 (562)
+..+.++++|+.|++++
T Consensus 193 --------l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 193 --------LRALAGLKNLDVLELFS 209 (210)
T ss_dssp --------CGGGTTCTTCSEEEEEE
T ss_pred --------ChhhcCCCCCCEEEccC
Confidence 34688899999999875
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.52 E-value=1.3e-13 Score=123.22 Aligned_cols=157 Identities=19% Similarity=0.357 Sum_probs=133.7
Q ss_pred cEEEeeccccccCCCccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcc
Q 046723 165 NFFVYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTK 244 (562)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~ 244 (562)
..+...+..+.....+..++++++|++++|.++.++.+..+++|++|++++|.+..++. +..+++|++|+++++.+..
T Consensus 43 ~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~l~~~~~~~ 120 (199)
T d2omxa2 43 TTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD 120 (199)
T ss_dssp CEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC
T ss_pred CEEECCCCCCCCccccccCCCcCcCccccccccCcccccCCcccccccccccccccccc--ccccccccccccccccccc
Confidence 45666666777777788899999999999999999889999999999999999988865 8899999999999998776
Q ss_pred cCcccCCcccCcEEeCCCCCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhccccccc
Q 046723 245 LPVGISELVSLQHLDLSESDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSI 324 (562)
Q Consensus 245 lp~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 324 (562)
++ .+..+++|++|++++|.+..++ .+..+++|+.|++.+| .+..++. ++++++|++|++++|.+..
T Consensus 121 ~~-~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n-~l~~l~~--l~~l~~L~~L~ls~N~i~~--------- 186 (199)
T d2omxa2 121 ID-PLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSN-QVTDLKP--LANLTTLERLDISSNKVSD--------- 186 (199)
T ss_dssp CG-GGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCCC---------
T ss_pred cc-ccchhhhhHHhhhhhhhhcccc-cccccccccccccccc-cccCCcc--ccCCCCCCEEECCCCCCCC---------
Confidence 64 5888999999999999998876 6889999999999998 6777775 8899999999999997653
Q ss_pred ccCCcccchhhhcCcccccee
Q 046723 325 LFGGGELIVEELLGLKHLEVI 345 (562)
Q Consensus 325 ~~~~~~~~~~~l~~l~~L~~L 345 (562)
+..++++++|+.|
T Consensus 187 --------i~~l~~L~~L~~L 199 (199)
T d2omxa2 187 --------ISVLAKLTNLESL 199 (199)
T ss_dssp --------CGGGGGCTTCSEE
T ss_pred --------CccccCCCCCCcC
Confidence 3456777777754
No 18
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=8.6e-14 Score=132.00 Aligned_cols=213 Identities=19% Similarity=0.230 Sum_probs=116.2
Q ss_pred ccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccC-cccCCcccCcEEeCCCC-Ccccc
Q 046723 191 LMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLP-VGISELVSLQHLDLSES-DIEEL 268 (562)
Q Consensus 191 l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp-~~~~~l~~L~~L~l~~~-~l~~l 268 (562)
.++..++.+|.. -.+++++|++++|.++.+++..|..+++|++|+++++++..++ ..+..+..++.+..... .++.+
T Consensus 18 c~~~~L~~iP~~-ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l 96 (284)
T d1ozna_ 18 CPQQGLQAVPVG-IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96 (284)
T ss_dssp CCSSCCSSCCTT-CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCC
T ss_pred cCCCCCCccCCC-CCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccc
Confidence 334444444431 1245666666666666666655666666666666666665443 33344556666555433 44444
Q ss_pred -chhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeE
Q 046723 269 -PGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISL 347 (562)
Q Consensus 269 -p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l 347 (562)
|..+.++++|++|++++| .+..++...+...++|+.+++.++.+..+ ....+..++
T Consensus 97 ~~~~~~~l~~L~~L~l~~n-~~~~~~~~~~~~~~~L~~l~l~~N~l~~i---------------~~~~f~~~~------- 153 (284)
T d1ozna_ 97 DPATFHGLGRLHTLHLDRC-GLQELGPGLFRGLAALQYLYLQDNALQAL---------------PDDTFRDLG------- 153 (284)
T ss_dssp CTTTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECCSSCCCCC---------------CTTTTTTCT-------
T ss_pred cchhhcccccCCEEecCCc-ccccccccccchhcccchhhhcccccccc---------------ChhHhcccc-------
Confidence 334556666666666665 33444443355566666666666554321 111233333
Q ss_pred EEecccchHHHHhhhhhhccccceeeccccCCCccchhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEE
Q 046723 348 TLRNSHGLQSFLRSWKLRRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVE 427 (562)
Q Consensus 348 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~ 427 (562)
+|++|+++++. +...+...+..+++|+.+.+.++ .+..+...... .+++|++|+
T Consensus 154 -------------------~L~~L~l~~N~-l~~l~~~~f~~l~~L~~l~l~~N-~l~~i~~~~f~-----~l~~L~~L~ 207 (284)
T d1ozna_ 154 -------------------NLTHLFLHGNR-ISSVPERAFRGLHSLDRLLLHQN-RVAHVHPHAFR-----DLGRLMTLY 207 (284)
T ss_dssp -------------------TCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSS-CCCEECTTTTT-----TCTTCCEEE
T ss_pred -------------------chhhcccccCc-ccccchhhhccccccchhhhhhc-cccccChhHhh-----hhhhccccc
Confidence 34444444432 22333234666777888888776 44444433322 267788888
Q ss_pred EecCCCCCCCc--cccccCCCceEEEecC
Q 046723 428 ICNCIKLKDLT--FLVFAPNLKSIKVGIC 454 (562)
Q Consensus 428 L~~c~~l~~l~--~l~~l~~L~~L~L~~c 454 (562)
++++ .+..++ .++.+++|++|++++.
T Consensus 208 l~~N-~i~~~~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 208 LFAN-NLSALPTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp CCSS-CCSCCCHHHHTTCTTCCEEECCSS
T ss_pred cccc-ccccccccccccccccCEEEecCC
Confidence 8877 455543 3667788888888763
No 19
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.8e-13 Score=129.81 Aligned_cols=172 Identities=24% Similarity=0.322 Sum_probs=136.4
Q ss_pred EEEeeccccccCCCccccccceEEeccccccccCCC--CCCCccccEEEccccCccccchhhhcCCCCCcEEEecCC-CC
Q 046723 166 FFVYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLSE--IPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHC-EL 242 (562)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~-~~ 242 (562)
.+...+.+...+|.. -...++.|++++|.++.++. +..+++|++|+++++.+..++...+..+..++.+....+ .+
T Consensus 15 ~v~c~~~~L~~iP~~-ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVG-IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp EEECCSSCCSSCCTT-CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EEEcCCCCCCccCCC-CCCCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 344455555665542 23578999999999999864 789999999999999999998888888999999988755 67
Q ss_pred ccc-CcccCCcccCcEEeCCCCCccccch-hhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhccc
Q 046723 243 TKL-PVGISELVSLQHLDLSESDIEELPG-ELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEAS 320 (562)
Q Consensus 243 ~~l-p~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~ 320 (562)
..+ |..+.++++|++|+++++.+..++. .+....+|+.+++.+| .+..+|...+..+++|++|++.+|.+..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N-~l~~i~~~~f~~~~~L~~L~l~~N~l~~----- 167 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN-ALQALPDDTFRDLGNLTHLFLHGNRISS----- 167 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCCE-----
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccc-cccccChhHhccccchhhcccccCcccc-----
Confidence 777 6678999999999999998886654 5677899999999997 7888887778899999999999997653
Q ss_pred ccccccCCcccchhhhcCccccceeeEEEecccc
Q 046723 321 ENSILFGGGELIVEELLGLKHLEVISLTLRNSHG 354 (562)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 354 (562)
.....+..+++|+.+.+..+....
T Consensus 168 ----------l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 168 ----------VPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp ----------ECTTTTTTCTTCCEEECCSSCCCE
T ss_pred ----------cchhhhccccccchhhhhhccccc
Confidence 123456677777777776655443
No 20
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.49 E-value=6.1e-13 Score=129.97 Aligned_cols=297 Identities=21% Similarity=0.229 Sum_probs=169.7
Q ss_pred EEEeeccccccCCCccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCccc
Q 046723 166 FFVYAGVGLVRAPDVRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKL 245 (562)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~l 245 (562)
.+.+.+.++..+|+. ..++++|++++|.++.+|.. +.+|+.|++.++.++.++. + .+.|++|++++|.++.+
T Consensus 42 ~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~~n~l~~l~~--l--p~~L~~L~L~~n~l~~l 113 (353)
T d1jl5a_ 42 ELELNNLGLSSLPEL--PPHLESLVASCNSLTELPEL--PQSLKSLLVDNNNLKALSD--L--PPLLEYLGVSNNQLEKL 113 (353)
T ss_dssp EEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCC--CTTCCEEECCSSCCSCCCS--C--CTTCCEEECCSSCCSSC
T ss_pred EEEeCCCCCCCCCCC--CCCCCEEECCCCCCcccccc--hhhhhhhhhhhcccchhhh--h--ccccccccccccccccc
Confidence 344445555555543 35778888888887777653 4577888888777766543 1 24578888888877777
Q ss_pred CcccCCcccCcEEeCCCCCccccchhhhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCccchhccccccc-
Q 046723 246 PVGISELVSLQHLDLSESDIEELPGELKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHKAIKEASENSI- 324 (562)
Q Consensus 246 p~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~- 324 (562)
|. ++.+++|++|+++++.+...|... ..+..+.+..+.. .... . +..++.++.+.+.++.............
T Consensus 114 p~-~~~l~~L~~L~l~~~~~~~~~~~~---~~l~~l~~~~~~~-~~~~-~-l~~l~~l~~L~l~~n~~~~~~~~~~~~~~ 186 (353)
T d1jl5a_ 114 PE-LQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQL-EELP-E-LQNLPFLTAIYADNNSLKKLPDLPLSLES 186 (353)
T ss_dssp CC-CTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCC-SSCC-C-CTTCTTCCEEECCSSCCSSCCCCCTTCCE
T ss_pred cc-hhhhccceeecccccccccccccc---ccccchhhccccc-cccc-c-ccccccceecccccccccccccccccccc
Confidence 64 567788888888877776665433 4455555554422 2222 2 5677888888888776544221111100
Q ss_pred --ccCCcccchhhhcCccccceeeEEEecccchHHHHhhhhhhccccceeeccccCCCccchhhhhhhcccCeeeeccc-
Q 046723 325 --LFGGGELIVEELLGLKHLEVISLTLRNSHGLQSFLRSWKLRRCTRALLLQCFNDSTLLEVSALAYLKQLNRLQIANS- 401 (562)
Q Consensus 325 --~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~- 401 (562)
..............++.|+.+++..+.....+... .++..+.+.++....... ..+.+....+...
T Consensus 187 l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~------~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~ 255 (353)
T d1jl5a_ 187 IVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLP------PSLEALNVRDNYLTDLPE-----LPQSLTFLDVSENI 255 (353)
T ss_dssp EECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCSCC------TTCCEEECCSSCCSCCCC-----CCTTCCEEECCSSC
T ss_pred ccccccccccccccccccccccccccccccccccccc------cccccccccccccccccc-----cccccccccccccc
Confidence 00111122334566777888877765554433211 144444444433222111 0111221111110
Q ss_pred -cccceeeccc---------hhhhhhhhhccccEEEEecCCCCCCCccccccCCCceEEEecCcchhhhhcCCCCCCccc
Q 046723 402 -VILEELKMDY---------AEEVQQFAFRSLNMVEICNCIKLKDLTFLVFAPNLKSIKVGICHAMEEIASEGKFAEVPE 471 (562)
Q Consensus 402 -~~l~~l~~~~---------~~~~~~~~~~~L~~L~L~~c~~l~~l~~l~~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~ 471 (562)
..+..++... ...+ ...+++|++|+|++| +++.+|. .+++|+.|++++|. +++++.
T Consensus 256 ~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~L~~L~Ls~N-~l~~lp~--~~~~L~~L~L~~N~-L~~l~~--------- 321 (353)
T d1jl5a_ 256 FSGLSELPPNLYYLNASSNEIRSL-CDLPPSLEELNVSNN-KLIELPA--LPPRLERLIASFNH-LAEVPE--------- 321 (353)
T ss_dssp CSEESCCCTTCCEEECCSSCCSEE-CCCCTTCCEEECCSS-CCSCCCC--CCTTCCEEECCSSC-CSCCCC---------
T ss_pred ccccccccchhcccccccCccccc-cccCCCCCEEECCCC-ccCcccc--ccCCCCEEECCCCc-CCcccc---------
Confidence 0111110000 0000 012689999999999 6777763 58999999998864 566532
Q ss_pred cccCCCCccccceeeccCCcCCcccCcCCCCCCCcceeeec
Q 046723 472 VMANLNPFEKLQNLEVAGARNLKSIYWKPLPFPHLKAMSFL 512 (562)
Q Consensus 472 ~~~~~~~~~~L~~L~l~~c~~L~~~~~~~~~~~~L~~L~i~ 512 (562)
.+++|++|++++|+ ++++|..+ ++|+.|.+.
T Consensus 322 ------~~~~L~~L~L~~N~-L~~lp~~~---~~L~~L~~~ 352 (353)
T d1jl5a_ 322 ------LPQNLKQLHVEYNP-LREFPDIP---ESVEDLRMN 352 (353)
T ss_dssp ------CCTTCCEEECCSSC-CSSCCCCC---TTCCEEECC
T ss_pred ------ccCCCCEEECcCCc-CCCCCccc---cccCeeECc
Confidence 25689999999986 89887543 568888775
No 21
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.43 E-value=3.7e-13 Score=109.70 Aligned_cols=97 Identities=24% Similarity=0.304 Sum_probs=50.6
Q ss_pred EEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCccc
Q 046723 188 RLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIEE 267 (562)
Q Consensus 188 ~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~~ 267 (562)
.|++++|.++.++.+..+++|++|++++|.++.+|+. ++.+++|++|++++|.++.+| ++..+++|++|++++|.+..
T Consensus 2 ~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~i~~ 79 (124)
T d1dcea3 2 VLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQ 79 (124)
T ss_dssp EEECTTSCCSSCCCGGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCS
T ss_pred EEEcCCCCCCCCcccccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccccC-ccccccccCeEECCCCccCC
Confidence 4555555555555555555555555555555555433 445555555555555555553 25555555555555555554
Q ss_pred cch--hhhCCCCCcEEeccCc
Q 046723 268 LPG--ELKALVNLKCLDLEYT 286 (562)
Q Consensus 268 lp~--~~~~l~~L~~L~l~~~ 286 (562)
+|. .++.+++|+++++++|
T Consensus 80 ~~~~~~l~~~~~L~~L~l~~N 100 (124)
T d1dcea3 80 SAAIQPLVSCPRLVLLNLQGN 100 (124)
T ss_dssp SSTTGGGGGCTTCCEEECTTS
T ss_pred CCCchhhcCCCCCCEEECCCC
Confidence 432 3444555555555554
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.41 E-value=5.7e-13 Score=108.59 Aligned_cols=103 Identities=25% Similarity=0.311 Sum_probs=90.5
Q ss_pred cEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCccccchhhhCCCCCcEEeccCcCC
Q 046723 209 LTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIEELPGELKALVNLKCLDLEYTGN 288 (562)
Q Consensus 209 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~ 288 (562)
|+|++++|.++.++. +..+++|++|++++|.++.+|..++.+++|++|++++|.++.+| +++.+++|++|++++| .
T Consensus 1 R~L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N-~ 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNN-R 76 (124)
T ss_dssp SEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSS-C
T ss_pred CEEEcCCCCCCCCcc--cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCC-c
Confidence 689999999998865 78999999999999999999989999999999999999999987 5899999999999998 6
Q ss_pred CCccch-hhhcCCCCCCEEEecCCCccc
Q 046723 289 LITIPR-QLISNLSRLQVLRMFGASHKA 315 (562)
Q Consensus 289 l~~~p~-~~~~~l~~L~~L~l~~~~~~~ 315 (562)
+..++. ..++.+++|++|++.+|....
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 666663 337889999999999987653
No 23
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=7.5e-13 Score=122.20 Aligned_cols=103 Identities=21% Similarity=0.309 Sum_probs=72.8
Q ss_pred cEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCc-ccCCcccCcEEeCCCCCccc-cch-hhhCCCCCcEEeccC
Q 046723 209 LTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPV-GISELVSLQHLDLSESDIEE-LPG-ELKALVNLKCLDLEY 285 (562)
Q Consensus 209 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~-~~~~l~~L~~L~l~~~~l~~-lp~-~~~~l~~L~~L~l~~ 285 (562)
++++.++..++.+|... .+++++|++++|.++.+|. .|.++++|++|++++|.+.. ++. .+..+++++++.+..
T Consensus 11 ~~i~c~~~~l~~iP~~l---~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCSSCCSCS---CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCCCcCCCC---CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56677777777777653 2567888888888887765 46778888888888876653 332 456777888887766
Q ss_pred cCCCCccchhhhcCCCCCCEEEecCCCcc
Q 046723 286 TGNLITIPRQLISNLSRLQVLRMFGASHK 314 (562)
Q Consensus 286 ~~~l~~~p~~~~~~l~~L~~L~l~~~~~~ 314 (562)
+..+..++...+.++++|+++++.++...
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccccchhhhc
Confidence 65666666665777888888888776544
No 24
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=4.5e-13 Score=123.77 Aligned_cols=104 Identities=15% Similarity=0.244 Sum_probs=64.9
Q ss_pred EEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcc-c-CcccCCcccCcEEeCCCC-C
Q 046723 188 RLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTK-L-PVGISELVSLQHLDLSES-D 264 (562)
Q Consensus 188 ~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~-l-p~~~~~l~~L~~L~l~~~-~ 264 (562)
.++..+..++.+|.- -.+++++|++++|.++.++...|.++++|++|++++|.+.. + +..+..+++++++.+..+ .
T Consensus 12 ~i~c~~~~l~~iP~~-l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~ 90 (242)
T d1xwdc1 12 VFLCQESKVTEIPSD-LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 90 (242)
T ss_dssp EEEEESCSCSSCCSC-SCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTT
T ss_pred EEEEeCCCCCCcCCC-CCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccc
Confidence 455555555555531 12467777777777777776667777777777777776553 3 334566777777776543 5
Q ss_pred ccccc-hhhhCCCCCcEEeccCcCCCCccc
Q 046723 265 IEELP-GELKALVNLKCLDLEYTGNLITIP 293 (562)
Q Consensus 265 l~~lp-~~~~~l~~L~~L~l~~~~~l~~~p 293 (562)
+..++ ..+.++++|+++++.++ .+...+
T Consensus 91 l~~~~~~~~~~l~~L~~l~l~~~-~l~~~~ 119 (242)
T d1xwdc1 91 LLYINPEAFQNLPNLQYLLISNT-GIKHLP 119 (242)
T ss_dssp CCEECTTSEECCTTCCEEEEESC-CCCSCC
T ss_pred ccccccccccccccccccccchh-hhcccc
Confidence 55443 34567777777777776 444444
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=3.1e-13 Score=115.93 Aligned_cols=115 Identities=20% Similarity=0.241 Sum_probs=80.2
Q ss_pred ccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCccccchhh-hCC
Q 046723 197 RNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIEELPGEL-KAL 275 (562)
Q Consensus 197 ~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~~lp~~~-~~l 275 (562)
...+.+.++..+|.|++++|.++.++. .+..+++|++|++++|.++.++ .+..+++|++|++++|.++.+|..+ ..+
T Consensus 9 ~~~~~~~n~~~lr~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l 86 (162)
T d1a9na_ 9 EQAAQYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQAL 86 (162)
T ss_dssp HTSCEEECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred hhhHhccCcCcCcEEECCCCCCCccCc-cccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccc
Confidence 334455566677777777777777753 3566777888888888777774 4777778888888888777776543 467
Q ss_pred CCCcEEeccCcCCCCccch-hhhcCCCCCCEEEecCCCcc
Q 046723 276 VNLKCLDLEYTGNLITIPR-QLISNLSRLQVLRMFGASHK 314 (562)
Q Consensus 276 ~~L~~L~l~~~~~l~~~p~-~~~~~l~~L~~L~l~~~~~~ 314 (562)
++|++|++++| .+..++. ..+..+++|++|++.+|...
T Consensus 87 ~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 87 PDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp TTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cccccceeccc-cccccccccccccccccchhhcCCCccc
Confidence 78888888777 4555543 23667778888888777654
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=4.2e-13 Score=115.10 Aligned_cols=131 Identities=21% Similarity=0.314 Sum_probs=110.3
Q ss_pred CCCccccccceEEeccccccccCCCC-CCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCccc-CCccc
Q 046723 177 APDVRGWEKARRLSLMQNQIRNLSEI-PTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGI-SELVS 254 (562)
Q Consensus 177 ~~~~~~~~~l~~L~l~~~~~~~l~~~-~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~-~~l~~ 254 (562)
.+.+....++|.|++++|.++.++.+ ..+++|++|++++|.++.++. +..+++|++|++++|+++.+|..+ ..+++
T Consensus 11 ~~~~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~--~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 11 AAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp SCEEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECC--CCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hHhccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCC--cccCcchhhhhcccccccCCCccccccccc
Confidence 34455667899999999999999765 678999999999999998854 889999999999999999997764 57999
Q ss_pred CcEEeCCCCCccccch--hhhCCCCCcEEeccCcCCCCccch---hhhcCCCCCCEEEecC
Q 046723 255 LQHLDLSESDIEELPG--ELKALVNLKCLDLEYTGNLITIPR---QLISNLSRLQVLRMFG 310 (562)
Q Consensus 255 L~~L~l~~~~l~~lp~--~~~~l~~L~~L~l~~~~~l~~~p~---~~~~~l~~L~~L~l~~ 310 (562)
|++|++++|.++.++. .+..+++|++|++.+| .+...|. ..+..+++|+.|+...
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD~~~ 148 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLDFQK 148 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEETTEE
T ss_pred cccceeccccccccccccccccccccchhhcCCC-ccccccchHHHHHHHCCCcCeeCCCC
Confidence 9999999999998764 5788999999999998 4566663 3477899999987553
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.23 E-value=2.1e-11 Score=107.83 Aligned_cols=126 Identities=22% Similarity=0.342 Sum_probs=98.1
Q ss_pred eEEeccccccccCCCCCCCccccEEEccccCccc-cchhhhcCCCCCcEEEecCCCCccc-CcccCCcccCcEEeCCCCC
Q 046723 187 RRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRK-IHNDFFQFMPSLKVLNLSHCELTKL-PVGISELVSLQHLDLSESD 264 (562)
Q Consensus 187 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~-~~~~~~~~l~~L~~L~l~~~~~~~l-p~~~~~l~~L~~L~l~~~~ 264 (562)
+.++.+++.++.+|.- -.+++++|++++|.++. ++...|..+++|+.|++++|.+..+ +..+..+++|++|++++|+
T Consensus 11 ~~v~Cs~~~L~~iP~~-lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRD-IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCSSCCSC-CCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEEeCCCcCccCCC-CCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 3566667777777641 12678888999888875 5566678889999999988888765 4567788889999999998
Q ss_pred ccccchh-hhCCCCCcEEeccCcCCCCccchhhhcCCCCCCEEEecCCCcc
Q 046723 265 IEELPGE-LKALVNLKCLDLEYTGNLITIPRQLISNLSRLQVLRMFGASHK 314 (562)
Q Consensus 265 l~~lp~~-~~~l~~L~~L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~~ 314 (562)
++.+|+. +.++++|++|++++| .+..+|...+..+++|++|++.+|...
T Consensus 90 l~~l~~~~F~~l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccccCHHHHhCCCcccccccCCc-cccccCHHHhcCCcccccccccccccc
Confidence 8887654 678889999999987 678888777888889999998887654
No 28
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.20 E-value=2.6e-12 Score=120.41 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=64.6
Q ss_pred CChhHHHHHHHHHHHcCCchhHHHHHHHHhcCCCChhHHHHHHHHHhccCCCCCCCccchhhhhhhhccCCCchhhhhhh
Q 046723 3 SHPDILQLAQTAARECGGLPLALITIGRAMACKKTPEEWSYAIEVLRTSSSQFPGLGNEVYPLLKFSYDSLPSDTIRSCH 82 (562)
Q Consensus 3 ~~~~l~~i~~~i~~~c~GlPLai~~ig~~L~~~~~~~~W~~~l~~l~~~~~~~~~~~~~i~~~L~~sy~~L~~~~~k~cf 82 (562)
.++..++++++||++|+|+||||+++|+.|+. ++.+.|.+..+.|+.... .+++.+|++||++||++ +|.||
T Consensus 203 ~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~-k~~~~~~~~~~~L~~~~~------~~v~~il~~sY~~L~~~-lk~c~ 274 (277)
T d2a5yb3 203 VGEKEEDVLNKTIELSSGNPATLMMFFKSCEP-KTFEKMAQLNNKLESRGL------VGVECITPYSYKSLAMA-LQRCV 274 (277)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHTTCCS-SSHHHHHHHHHHHHHHCS------STTCCCSSSSSSSHHHH-HHHHH
T ss_pred CchhhHHHHHHHHHHhCCCHHHHHHHHHHhcc-CCHHHHHHHHHHHhcCcH------HHHHHHHHHHHhcccHH-HHHHH
Confidence 34567899999999999999999999999997 789999999988876533 47999999999999996 99999
Q ss_pred hh
Q 046723 83 LY 84 (562)
Q Consensus 83 l~ 84 (562)
-+
T Consensus 275 ~~ 276 (277)
T d2a5yb3 275 EV 276 (277)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.07 E-value=2.9e-10 Score=100.29 Aligned_cols=120 Identities=23% Similarity=0.262 Sum_probs=101.4
Q ss_pred EEeeccccccCCCccccccceEEecccccccc-C--CCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCc
Q 046723 167 FVYAGVGLVRAPDVRGWEKARRLSLMQNQIRN-L--SEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELT 243 (562)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~-l--~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~ 243 (562)
+...+.++..+|.- -..++++|++++|.+.. + ..+..+++|+.|++++|.+..++...+..+++|++|++++|+++
T Consensus 13 v~Cs~~~L~~iP~~-lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~ 91 (192)
T d1w8aa_ 13 VDCTGRGLKEIPRD-IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91 (192)
T ss_dssp EECTTSCCSSCCSC-CCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC
T ss_pred EEEeCCCcCccCCC-CCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccccc
Confidence 44455556666542 13689999999999975 3 34678999999999999999999888999999999999999999
Q ss_pred ccCc-ccCCcccCcEEeCCCCCccccchh-hhCCCCCcEEeccCcC
Q 046723 244 KLPV-GISELVSLQHLDLSESDIEELPGE-LKALVNLKCLDLEYTG 287 (562)
Q Consensus 244 ~lp~-~~~~l~~L~~L~l~~~~l~~lp~~-~~~l~~L~~L~l~~~~ 287 (562)
.+|. .|.++++|++|+|++|.++.+|+. +..+++|+++++++|.
T Consensus 92 ~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred ccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccc
Confidence 9855 578999999999999999998765 6889999999999984
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.02 E-value=8.1e-12 Score=110.79 Aligned_cols=109 Identities=24% Similarity=0.292 Sum_probs=82.4
Q ss_pred CCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEeCCCCCccccchhhhCCCCCcEE
Q 046723 202 IPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLDLSESDIEELPGELKALVNLKCL 281 (562)
Q Consensus 202 ~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L 281 (562)
+..+++|+.|++++|.++.++. +..+++|++|++++|.++.+|.....+.+|++|++++|.++.++ .+..+++|++|
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~~--l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L 120 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVL 120 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCCC--HHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEE
T ss_pred HhcccccceeECcccCCCCccc--ccCCccccChhhcccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 5567788888888888887753 77788888888888888877765556677888888888888765 57778888888
Q ss_pred eccCcCCCCccch-hhhcCCCCCCEEEecCCCcc
Q 046723 282 DLEYTGNLITIPR-QLISNLSRLQVLRMFGASHK 314 (562)
Q Consensus 282 ~l~~~~~l~~~p~-~~~~~l~~L~~L~l~~~~~~ 314 (562)
++++| .+..++. ..+..+++|+.|++.+|...
T Consensus 121 ~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 121 YMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp EESEE-ECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccc-hhccccccccccCCCccceeecCCCccc
Confidence 88877 5666553 33678888888888887654
No 31
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=6.7e-11 Score=119.44 Aligned_cols=322 Identities=15% Similarity=0.117 Sum_probs=178.6
Q ss_pred ccceEEeccccccccC---CCCCCCccccEEEccccCccccc----hhhhcCCCCCcEEEecCCCCcc-----cCcccC-
Q 046723 184 EKARRLSLMQNQIRNL---SEIPTCPHLLTLFLNENNLRKIH----NDFFQFMPSLKVLNLSHCELTK-----LPVGIS- 250 (562)
Q Consensus 184 ~~l~~L~l~~~~~~~l---~~~~~~~~L~~L~l~~~~l~~~~----~~~~~~l~~L~~L~l~~~~~~~-----lp~~~~- 250 (562)
.+++.|+++++++... .-+..++++++|+|++|.++... ...+..+++|++|++++|.++. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 4688999999998773 22467789999999999887432 2346789999999999998852 233332
Q ss_pred CcccCcEEeCCCCCccc-----cchhhhCCCCCcEEeccCcCCCCccc-----hh-------------------------
Q 046723 251 ELVSLQHLDLSESDIEE-----LPGELKALVNLKCLDLEYTGNLITIP-----RQ------------------------- 295 (562)
Q Consensus 251 ~l~~L~~L~l~~~~l~~-----lp~~~~~l~~L~~L~l~~~~~l~~~p-----~~------------------------- 295 (562)
...+|++|++++|.++. ++..+..+++|++|++++|. +.... ..
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 160 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhcccccccccccccc-chhhhhhhhhhcccccccccccccccccccchhhhcc
Confidence 23579999999998863 45667889999999999873 32211 00
Q ss_pred ---hhcCCCCCCEEEecCCCccchhcccc------cc-----cccCC-------cccchhhhcCccccceeeEEEecccc
Q 046723 296 ---LISNLSRLQVLRMFGASHKAIKEASE------NS-----ILFGG-------GELIVEELLGLKHLEVISLTLRNSHG 354 (562)
Q Consensus 296 ---~~~~l~~L~~L~l~~~~~~~~~~~~~------~~-----~~~~~-------~~~~~~~l~~l~~L~~L~l~~~~~~~ 354 (562)
.+.....++.+.+.++.......... .. ..... .......+.....++.+.+..+....
T Consensus 161 ~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~ 240 (460)
T d1z7xw1 161 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 240 (460)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccc
Confidence 01223445555555443221100000 00 00000 00112233344556666555443322
Q ss_pred hH---HHHhhhhhhccccceeeccccCCCccc---hhhhhhhcccCeeeeccccccceeeccchhhhhhhhhccccEEEE
Q 046723 355 LQ---SFLRSWKLRRCTRALLLQCFNDSTLLE---VSALAYLKQLNRLQIANSVILEELKMDYAEEVQQFAFRSLNMVEI 428 (562)
Q Consensus 355 ~~---~l~~~~~~~~~L~~L~l~~~~~~~~~~---~~~l~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~~L~~L~L 428 (562)
.. ...........++.++++++....... ...+...+.++.+.+.++ .+..................|+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n-~i~~~~~~~l~~~l~~~~~~L~~l~l 319 (460)
T d1z7xw1 241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN-ELGDEGARLLCETLLEPGCQLESLWV 319 (460)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC-CCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred cccchhhcccccccccccccccccccccccccccccccccccccccccccccc-cccccccchhhccccccccccccccc
Confidence 11 111122223467777877765432221 123455677777777665 33221111110001112457999999
Q ss_pred ecCCCCCCC--c----cccccCCCceEEEecCcchhhhhcCCCCCCccccccCC-CCccccceeeccCCcCCccc-----
Q 046723 429 CNCIKLKDL--T----FLVFAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANL-NPFEKLQNLEVAGARNLKSI----- 496 (562)
Q Consensus 429 ~~c~~l~~l--~----~l~~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~-~~~~~L~~L~l~~c~~L~~~----- 496 (562)
.+| .+... . .+...++|++|+|+++. +.+... ......+ ...+.|+.|++++| ++.+.
T Consensus 320 ~~~-~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~-------~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l 389 (460)
T d1z7xw1 320 KSC-SFTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGV-------RELCQGLGQPGSVLRVLWLADC-DVSDSSCSSL 389 (460)
T ss_dssp TTS-CCBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHH-------HHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHH
T ss_pred ccc-chhhhhhhhcccccccccchhhhheeeec-ccCccc-------chhhhhhhcccCCCCEEECCCC-CCChHHHHHH
Confidence 988 44442 1 13456789999999875 433100 0000011 23567999999998 45542
Q ss_pred CcCCCCCCCcceeeeccCCCCc
Q 046723 497 YWKPLPFPHLKAMSFLHCKKLK 518 (562)
Q Consensus 497 ~~~~~~~~~L~~L~i~~C~~L~ 518 (562)
.......++|++|++++. ++.
T Consensus 390 ~~~l~~~~~L~~L~Ls~N-~i~ 410 (460)
T d1z7xw1 390 AATLLANHSLRELDLSNN-CLG 410 (460)
T ss_dssp HHHHHHCCCCCEEECCSS-SCC
T ss_pred HHHHhcCCCCCEEECCCC-cCC
Confidence 111223588999999986 443
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.02 E-value=2.3e-12 Score=114.36 Aligned_cols=128 Identities=26% Similarity=0.292 Sum_probs=104.8
Q ss_pred ccccccceEEeccccccccCCCCCCCccccEEEccccCccccchhhhcCCCCCcEEEecCCCCcccCcccCCcccCcEEe
Q 046723 180 VRGWEKARRLSLMQNQIRNLSEIPTCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHCELTKLPVGISELVSLQHLD 259 (562)
Q Consensus 180 ~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~ 259 (562)
+..+.++++|++++|.++.++.+..+++|++|++++|.++.++.. +..+++|++|++++|.++.++ .+..+++|++|+
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~-~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENL-DAVADTLEELWISYNQIASLS-GIEKLVNLRVLY 121 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSH-HHHHHHCCEEECSEEECCCHH-HHHHHHHSSEEE
T ss_pred HhcccccceeECcccCCCCcccccCCccccChhhccccccccccc-ccccccccccccccccccccc-cccccccccccc
Confidence 456789999999999999999899999999999999999988653 455678999999999998874 588899999999
Q ss_pred CCCCCccccch--hhhCCCCCcEEeccCcCCCCccc---------hhhhcCCCCCCEEEec
Q 046723 260 LSESDIEELPG--ELKALVNLKCLDLEYTGNLITIP---------RQLISNLSRLQVLRMF 309 (562)
Q Consensus 260 l~~~~l~~lp~--~~~~l~~L~~L~l~~~~~l~~~p---------~~~~~~l~~L~~L~l~ 309 (562)
+++|.++.++. .+..+++|+.|++++|+.....+ ...+..+++|+.|+-.
T Consensus 122 L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD~~ 182 (198)
T d1m9la_ 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGM 182 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEESSG
T ss_pred cccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeCCc
Confidence 99999998763 58899999999999984222111 1125678888888744
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=6.4e-09 Score=87.78 Aligned_cols=85 Identities=20% Similarity=0.249 Sum_probs=40.4
Q ss_pred CCCCccccEEEcccc-CccccchhhhcCCCCCcEEEecCCCCccc-CcccCCcccCcEEeCCCCCccccchhhhCCCCCc
Q 046723 202 IPTCPHLLTLFLNEN-NLRKIHNDFFQFMPSLKVLNLSHCELTKL-PVGISELVSLQHLDLSESDIEELPGELKALVNLK 279 (562)
Q Consensus 202 ~~~~~~L~~L~l~~~-~l~~~~~~~~~~l~~L~~L~l~~~~~~~l-p~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~ 279 (562)
+..+++|+.|++.++ .++.++...|..+++|+.|++++|+++.+ |..|..+++|++|+|++|+++.+|..+....+|+
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~ 106 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQ 106 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCC
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcccccc
Confidence 344445555555433 34444444445555555555555555544 2334445555555555555555444433333444
Q ss_pred EEeccCc
Q 046723 280 CLDLEYT 286 (562)
Q Consensus 280 ~L~l~~~ 286 (562)
+|++++|
T Consensus 107 ~L~L~~N 113 (156)
T d2ifga3 107 ELVLSGN 113 (156)
T ss_dssp EEECCSS
T ss_pred ccccCCC
Confidence 5555444
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=9.8e-10 Score=110.67 Aligned_cols=323 Identities=17% Similarity=0.132 Sum_probs=167.6
Q ss_pred ccccccceEEeccccccccC------CCCCCCccccEEEccccCccccchhhh-----cCCCCCcEEEecCCCCcc----
Q 046723 180 VRGWEKARRLSLMQNQIRNL------SEIPTCPHLLTLFLNENNLRKIHNDFF-----QFMPSLKVLNLSHCELTK---- 244 (562)
Q Consensus 180 ~~~~~~l~~L~l~~~~~~~l------~~~~~~~~L~~L~l~~~~l~~~~~~~~-----~~l~~L~~L~l~~~~~~~---- 244 (562)
+..+++++.|.+.+|.++.. ..+..+++|+.|++++|.++......+ ....+|++|++++|+++.
T Consensus 23 ~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~ 102 (460)
T d1z7xw1 23 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 102 (460)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccc
Confidence 34567899999999987642 224688999999999998864322222 123579999999998863
Q ss_pred -cCcccCCcccCcEEeCCCCCcccc-----ch-----------------------------hhhCCCCCcEEeccCcCCC
Q 046723 245 -LPVGISELVSLQHLDLSESDIEEL-----PG-----------------------------ELKALVNLKCLDLEYTGNL 289 (562)
Q Consensus 245 -lp~~~~~l~~L~~L~l~~~~l~~l-----p~-----------------------------~~~~l~~L~~L~l~~~~~l 289 (562)
++..+..+++|++|++++|.+... +. .+.....++.++++++...
T Consensus 103 ~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~ 182 (460)
T d1z7xw1 103 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 182 (460)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred cccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccccccccccccccccccccccc
Confidence 456788899999999999876421 10 1123345666666654211
Q ss_pred Cc----cchhhhcCCCCCCEEEecCCCccchhcccc----------cccccCC--------cccchhhhcCccccceeeE
Q 046723 290 IT----IPRQLISNLSRLQVLRMFGASHKAIKEASE----------NSILFGG--------GELIVEELLGLKHLEVISL 347 (562)
Q Consensus 290 ~~----~p~~~~~~l~~L~~L~l~~~~~~~~~~~~~----------~~~~~~~--------~~~~~~~l~~l~~L~~L~l 347 (562)
.. ........-.....+...++.......... ....... .............++.+++
T Consensus 183 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l 262 (460)
T d1z7xw1 183 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 262 (460)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred cccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhccccccccccccccc
Confidence 10 000001112233444444443222100000 0000000 0111223334567777777
Q ss_pred EEecccchH--HHHhhhhhhccccceeeccccCCCccchhhh-----hhhcccCeeeeccccccceeeccchhhhhhhhh
Q 046723 348 TLRNSHGLQ--SFLRSWKLRRCTRALLLQCFNDSTLLEVSAL-----AYLKQLNRLQIANSVILEELKMDYAEEVQQFAF 420 (562)
Q Consensus 348 ~~~~~~~~~--~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~l-----~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~ 420 (562)
+.+...... ...........++.++++++.. .......+ .....|+.+.+.++ .+.......... .....
T Consensus 263 ~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i-~~~~~~~l~~~l~~~~~~L~~l~l~~~-~l~~~~~~~l~~-~~~~~ 339 (460)
T d1z7xw1 263 WECGITAKGCGDLCRVLRAKESLKELSLAGNEL-GDEGARLLCETLLEPGCQLESLWVKSC-SFTAACCSHFSS-VLAQN 339 (460)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC-HHHHHHHHHHHHTSTTCCCCEEECTTS-CCBGGGHHHHHH-HHHHC
T ss_pred ccccccccccccccccccccccccccccccccc-cccccchhhcccccccccccccccccc-chhhhhhhhccc-ccccc
Confidence 765544322 2222223334677777766432 22111111 12356788888776 333221111110 01234
Q ss_pred ccccEEEEecCCCCCC-----C-cccc-ccCCCceEEEecCcchhhhhcCCCCCCccccccCCCCccccceeeccCCcCC
Q 046723 421 RSLNMVEICNCIKLKD-----L-TFLV-FAPNLKSIKVGICHAMEEIASEGKFAEVPEVMANLNPFEKLQNLEVAGARNL 493 (562)
Q Consensus 421 ~~L~~L~L~~c~~l~~-----l-~~l~-~l~~L~~L~L~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~L 493 (562)
++|++|+|+++ .+.+ + ..+. ..+.|++|+|++|. +.+... ......+...++|++|+|+++ .+
T Consensus 340 ~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~-i~~~~~-------~~l~~~l~~~~~L~~L~Ls~N-~i 409 (460)
T d1z7xw1 340 RFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLADCD-VSDSSC-------SSLAATLLANHSLRELDLSNN-CL 409 (460)
T ss_dssp SSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CCHHHH-------HHHHHHHHHCCCCCEEECCSS-SC
T ss_pred cchhhhheeee-cccCcccchhhhhhhcccCCCCEEECCCCC-CChHHH-------HHHHHHHhcCCCCCEEECCCC-cC
Confidence 57888888887 4543 1 1122 35668888888875 333100 001112344678888888876 34
Q ss_pred cccCc-----C-CCCCCCcceeeeccCC
Q 046723 494 KSIYW-----K-PLPFPHLKAMSFLHCK 515 (562)
Q Consensus 494 ~~~~~-----~-~~~~~~L~~L~i~~C~ 515 (562)
..-.. . ...-..|+.|.+.++.
T Consensus 410 ~~~g~~~l~~~l~~~~~~L~~l~l~~~~ 437 (460)
T d1z7xw1 410 GDAGILQLVESVRQPGCLLEQLVLYDIY 437 (460)
T ss_dssp CHHHHHHHHHHHTSTTCCCCEEECTTCC
T ss_pred CHHHHHHHHHHHHhCCCccCEEECCCCC
Confidence 32110 0 1122468888888764
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=1.4e-08 Score=85.63 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=86.2
Q ss_pred CCccccEEEccccCccccchhhhcCCCCCcEEEecCC-CCcccC-cccCCcccCcEEeCCCCCccccch-hhhCCCCCcE
Q 046723 204 TCPHLLTLFLNENNLRKIHNDFFQFMPSLKVLNLSHC-ELTKLP-VGISELVSLQHLDLSESDIEELPG-ELKALVNLKC 280 (562)
Q Consensus 204 ~~~~L~~L~l~~~~l~~~~~~~~~~l~~L~~L~l~~~-~~~~lp-~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~ 280 (562)
.+.....++..++.+.+.+.. +..+++|+.|++.++ .++.++ ..|.++++|+.|++++|+++.+++ .+..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~~~p~~-l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCccCccc-ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 344456677788887777765 778899999999877 588885 458889999999999999998854 5788999999
Q ss_pred EeccCcCCCCccchhhhcCCCCCCEEEecCCCc
Q 046723 281 LDLEYTGNLITIPRQLISNLSRLQVLRMFGASH 313 (562)
Q Consensus 281 L~l~~~~~l~~~p~~~~~~l~~L~~L~l~~~~~ 313 (562)
|++++| .+..+|.+.+. ..+|++|++.+|.+
T Consensus 85 L~Ls~N-~l~~l~~~~~~-~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 85 LNLSFN-ALESLSWKTVQ-GLSLQELVLSGNPL 115 (156)
T ss_dssp EECCSS-CCSCCCSTTTC-SCCCCEEECCSSCC
T ss_pred eeccCC-CCcccChhhhc-cccccccccCCCcc
Confidence 999998 68888887554 44799999998865
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.72 E-value=8.1e-09 Score=99.85 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=36.6
Q ss_pred CCccccEEEccccCccccc----hhhhcCCCCCcEEEecCCCCccc-----------CcccCCcccCcEEeCCCCCccc-
Q 046723 204 TCPHLLTLFLNENNLRKIH----NDFFQFMPSLKVLNLSHCELTKL-----------PVGISELVSLQHLDLSESDIEE- 267 (562)
Q Consensus 204 ~~~~L~~L~l~~~~l~~~~----~~~~~~l~~L~~L~l~~~~~~~l-----------p~~~~~l~~L~~L~l~~~~l~~- 267 (562)
....++.|++++|.+.... ...+...++|+.++++++..... ...+...++|+.|++++|.+..
T Consensus 29 ~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 108 (344)
T d2ca6a1 29 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 108 (344)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred hCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccc
Confidence 3445555555555443211 11133445555555554432211 1223334455555555554431
Q ss_pred ----cchhhhCCCCCcEEeccCc
Q 046723 268 ----LPGELKALVNLKCLDLEYT 286 (562)
Q Consensus 268 ----lp~~~~~l~~L~~L~l~~~ 286 (562)
+...+...++|++|++++|
T Consensus 109 ~~~~l~~~l~~~~~L~~L~l~~n 131 (344)
T d2ca6a1 109 AQEPLIDFLSKHTPLEHLYLHNN 131 (344)
T ss_dssp THHHHHHHHHHCTTCCEEECCSS
T ss_pred cccchhhhhcccccchheecccc
Confidence 2233344455555555554
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.69 E-value=8.3e-09 Score=99.77 Aligned_cols=161 Identities=17% Similarity=0.147 Sum_probs=102.5
Q ss_pred cccccceEEecccccccc-----C-CCCCCCccccEEEccccCccccc----------hhhhcCCCCCcEEEecCCCCcc
Q 046723 181 RGWEKARRLSLMQNQIRN-----L-SEIPTCPHLLTLFLNENNLRKIH----------NDFFQFMPSLKVLNLSHCELTK 244 (562)
Q Consensus 181 ~~~~~l~~L~l~~~~~~~-----l-~~~~~~~~L~~L~l~~~~l~~~~----------~~~~~~l~~L~~L~l~~~~~~~ 244 (562)
....+++.|++++|.+.. + ..+...++|+.+.++++...... ...+..+++|+.|++++|.+..
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 107 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 107 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccc
Confidence 345678999999987744 2 34567899999999866543221 1225678999999999997763
Q ss_pred -----cCcccCCcccCcEEeCCCCCccc-----cch---------hhhCCCCCcEEeccCcCCCCccc----hhhhcCCC
Q 046723 245 -----LPVGISELVSLQHLDLSESDIEE-----LPG---------ELKALVNLKCLDLEYTGNLITIP----RQLISNLS 301 (562)
Q Consensus 245 -----lp~~~~~l~~L~~L~l~~~~l~~-----lp~---------~~~~l~~L~~L~l~~~~~l~~~p----~~~~~~l~ 301 (562)
+...+...++|+.|++++|.+.. +.. .....+.|+.+.++++. +..-. ...+...+
T Consensus 108 ~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~-i~~~~~~~l~~~l~~~~ 186 (344)
T d2ca6a1 108 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR-LENGSMKEWAKTFQSHR 186 (344)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC-CTGGGHHHHHHHHHHCT
T ss_pred ccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccc-ccccccccccchhhhhh
Confidence 34455667899999999997642 111 12345678888887763 32111 11245677
Q ss_pred CCCEEEecCCCccchhcccccccccCCcccchhhhcCccccceeeEEEecc
Q 046723 302 RLQVLRMFGASHKAIKEASENSILFGGGELIVEELLGLKHLEVISLTLRNS 352 (562)
Q Consensus 302 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 352 (562)
.|++|++.+|.+..... .......+..+++|+.|+++.+..
T Consensus 187 ~L~~L~L~~n~i~~~g~----------~~~l~~~l~~~~~L~~L~Ls~N~i 227 (344)
T d2ca6a1 187 LLHTVKMVQNGIRPEGI----------EHLLLEGLAYCQELKVLDLQDNTF 227 (344)
T ss_dssp TCCEEECCSSCCCHHHH----------HHHHHTTGGGCTTCCEEECCSSCC
T ss_pred hhccccccccccccccc----------ccchhhhhcchhhhcccccccccc
Confidence 88888888776542100 011233456667777777766554
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=2.7e-06 Score=71.72 Aligned_cols=85 Identities=21% Similarity=0.162 Sum_probs=60.4
Q ss_pred hhhcCCCCCcEEEecCCCCcccC---cccCCcccCcEEeCCCCCccccch-hhhCCCCCcEEeccCcCCCCccc------
Q 046723 224 DFFQFMPSLKVLNLSHCELTKLP---VGISELVSLQHLDLSESDIEELPG-ELKALVNLKCLDLEYTGNLITIP------ 293 (562)
Q Consensus 224 ~~~~~l~~L~~L~l~~~~~~~lp---~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~l~~~p------ 293 (562)
..+..+++|++|++++|.++.++ ..+..+++|++|++++|.++.++. ......+|+.|++.+|+......
T Consensus 59 ~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~ 138 (162)
T d1koha1 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYI 138 (162)
T ss_dssp HHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHH
T ss_pred HHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHH
Confidence 34567899999999999888663 445678899999999999888765 22344578889999885433322
Q ss_pred hhhhcCCCCCCEEEe
Q 046723 294 RQLISNLSRLQVLRM 308 (562)
Q Consensus 294 ~~~~~~l~~L~~L~l 308 (562)
..++..+|+|+.|+-
T Consensus 139 ~~i~~~~P~L~~LDg 153 (162)
T d1koha1 139 SAIRERFPKLLRLDG 153 (162)
T ss_dssp HHHHTTSTTCCEETT
T ss_pred HHHHHHCCCCCEECc
Confidence 133567888888764
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.41 E-value=2.1e-05 Score=65.99 Aligned_cols=80 Identities=29% Similarity=0.338 Sum_probs=60.7
Q ss_pred CCCccccEEEccccCccccch--hhhcCCCCCcEEEecCCCCcccCc-ccCCcccCcEEeCCCCCccccc--------hh
Q 046723 203 PTCPHLLTLFLNENNLRKIHN--DFFQFMPSLKVLNLSHCELTKLPV-GISELVSLQHLDLSESDIEELP--------GE 271 (562)
Q Consensus 203 ~~~~~L~~L~l~~~~l~~~~~--~~~~~l~~L~~L~l~~~~~~~lp~-~~~~l~~L~~L~l~~~~l~~lp--------~~ 271 (562)
..+++|++|++++|.++.+.. ..+..+++|++|++++|.++.++. ......+|+.|++.+|.+.... ..
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 357889999999999887643 446789999999999999988754 2233457899999999886432 23
Q ss_pred hhCCCCCcEEe
Q 046723 272 LKALVNLKCLD 282 (562)
Q Consensus 272 ~~~l~~L~~L~ 282 (562)
+..+++|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 56789999887
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.58 E-value=0.0019 Score=53.75 Aligned_cols=20 Identities=5% Similarity=0.145 Sum_probs=10.1
Q ss_pred chhhhcCccccceeeEEEec
Q 046723 332 IVEELLGLKHLEVISLTLRN 351 (562)
Q Consensus 332 ~~~~l~~l~~L~~L~l~~~~ 351 (562)
+...+...+.|+.|+++...
T Consensus 123 l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 123 MMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhCCCccEeeCcCCC
Confidence 34445555555555555443
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.41 E-value=0.0018 Score=53.87 Aligned_cols=108 Identities=13% Similarity=0.018 Sum_probs=64.0
Q ss_pred CCccccEEEcccc-Ccccc----chhhhcCCCCCcEEEecCCCCc-----ccCcccCCcccCcEEeCCCCCccc-----c
Q 046723 204 TCPHLLTLFLNEN-NLRKI----HNDFFQFMPSLKVLNLSHCELT-----KLPVGISELVSLQHLDLSESDIEE-----L 268 (562)
Q Consensus 204 ~~~~L~~L~l~~~-~l~~~----~~~~~~~l~~L~~L~l~~~~~~-----~lp~~~~~l~~L~~L~l~~~~l~~-----l 268 (562)
+.+.|+.|+++++ .++.. ....+...++|++|++++|.+. .+...+...+.|++|++++|.+.. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 3466777777653 34321 1122556677888888877665 223344555678888888887652 3
Q ss_pred chhhhCCCCCcEEeccCcCCCCccc-------hhhhcCCCCCCEEEecCCC
Q 046723 269 PGELKALVNLKCLDLEYTGNLITIP-------RQLISNLSRLQVLRMFGAS 312 (562)
Q Consensus 269 p~~~~~l~~L~~L~l~~~~~l~~~p-------~~~~~~l~~L~~L~l~~~~ 312 (562)
-..+..-+.|++|++.++. ...+. ...+..-++|++|++..+.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~-~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQR-QSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHTTTTCCCSEEECCCCS-SCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhCCcCCEEECCCCc-CCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 3445666778888887652 22221 1224456788888886654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.79 E-value=0.0056 Score=50.67 Aligned_cols=21 Identities=14% Similarity=0.053 Sum_probs=11.0
Q ss_pred chhhhcCccccceeeEEEecc
Q 046723 332 IVEELLGLKHLEVISLTLRNS 352 (562)
Q Consensus 332 ~~~~l~~l~~L~~L~l~~~~~ 352 (562)
+...+...+.|+.|++.....
T Consensus 124 La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 124 IANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCCCcCEEeCcCCCC
Confidence 444555555555555554443
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.79 E-value=0.0013 Score=54.71 Aligned_cols=15 Identities=7% Similarity=-0.037 Sum_probs=7.0
Q ss_pred CCCCCcEEEecCCCC
Q 046723 228 FMPSLKVLNLSHCEL 242 (562)
Q Consensus 228 ~l~~L~~L~l~~~~~ 242 (562)
..++|+.|++++|.+
T Consensus 44 ~n~~L~~L~Ls~n~l 58 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRS 58 (166)
T ss_dssp TCCSCCEEECTTSCC
T ss_pred cCCccCeeeccCCcc
Confidence 444444444444443
Done!