BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046724
MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMV
SRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVE
SADACKLDRYSSSEKSGDSPVSLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGP
IFLSIALQLEKEEDPFS

High Scoring Gene Products

Symbol, full name Information P value
AT4G28070 protein from Arabidopsis thaliana 3.4e-21
AT4G30490 protein from Arabidopsis thaliana 2.3e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046724
        (197 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2133007 - symbol:AT4G28070 species:3702 "Arabi...   254  3.4e-21   1
TAIR|locus:2118786 - symbol:AT4G30490 species:3702 "Arabi...   238  2.3e-19   1


>TAIR|locus:2133007 [details] [associations]
            symbol:AT4G28070 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
            InterPro:IPR005654 Pfam:PF03969 GO:GO:0005524 EMBL:CP002687
            GenomeReviews:CT486007_GR eggNOG:COG1485 HOGENOM:HOG000259600
            PANTHER:PTHR12169 EMBL:BT015879 EMBL:BT020434 IPI:IPI00657196
            RefSeq:NP_001031737.1 UniGene:At.24978 UniGene:At.69900
            ProteinModelPortal:Q5XET7 SMR:Q5XET7 PaxDb:Q5XET7 PRIDE:Q5XET7
            EnsemblPlants:AT4G28070.2 GeneID:828922 KEGG:ath:AT4G28070
            TAIR:At4g28070 OMA:FEDLCDK PhylomeDB:Q5XET7 ProtClustDB:CLSN2689685
            Genevestigator:Q5XET7 Uniprot:Q5XET7
        Length = 473

 Score = 254 (94.5 bits), Expect = 3.4e-21, P = 3.4e-21
 Identities = 58/100 (58%), Positives = 68/100 (68%)

Query:    38 HNCAYGVTNNAEIES-FLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGE 96
             HNC   +  +    S F  S F  S   + D       G++    AGPLVEYERRI+AGE
Sbjct:    26 HNCLISINPSTSSSSLFSASSFCSSPHSNGD-------GKI----AGPLVEYERRIVAGE 74

Query:    97 LLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKS 136
             LLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S KS
Sbjct:    75 LLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAKS 114


>TAIR|locus:2118786 [details] [associations]
            symbol:AT4G30490 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM;IDA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0005516 "calmodulin
            binding" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0016036 "cellular response to phosphate starvation"
            evidence=RCA] [GO:0019243 "methylglyoxal catabolic process to
            D-lactate" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
            process" evidence=RCA] [GO:0042631 "cellular response to water
            deprivation" evidence=RCA] InterPro:IPR005654 Pfam:PF03969
            GO:GO:0005739 GO:GO:0005524 GO:GO:0009507 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0005516 eggNOG:COG1485
            HOGENOM:HOG000259600 PANTHER:PTHR12169 OMA:FMQDVHK
            ProtClustDB:CLSN2689685 EMBL:AY099610 EMBL:AY087968 EMBL:BT000265
            IPI:IPI00541472 RefSeq:NP_567847.1 UniGene:At.31832
            UniGene:At.60046 ProteinModelPortal:Q8L517 SMR:Q8L517 IntAct:Q8L517
            MINT:MINT-7046496 STRING:Q8L517 PaxDb:Q8L517 PRIDE:Q8L517
            EnsemblPlants:AT4G30490.1 GeneID:829172 KEGG:ath:AT4G30490
            TAIR:At4g30490 InParanoid:Q8L517 PhylomeDB:Q8L517
            Genevestigator:Q8L517 Uniprot:Q8L517
        Length = 497

 Score = 238 (88.8 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 59/144 (40%), Positives = 87/144 (60%)

Query:     3 RIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSR 62
             R++  +R  R AL + +  Y S+F ++ + L    +     +  N +  S L S+  + R
Sbjct:     6 RLSSLSR-IRWALRNNQERYSSTFYSKSRKLLIGVNQNQALLNTNTD-NSSLYSRSSIFR 63

Query:    63 ALSTDAAASA-------SIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLY 115
              LS +A  +A       ++ +V+R   GPLVEYERRI  GEL+ GD+CQ+  L ELQRLY
Sbjct:    64 GLSAEAVEAADPATTRVTVSDVNRT--GPLVEYERRISNGELMTGDICQISALRELQRLY 121

Query:   116 DELVESADACKLDRYSSSEKSGDS 139
             DELV+S D C+LDRY++S+KS  S
Sbjct:   122 DELVDSVDTCRLDRYNTSDKSSRS 145


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      197       197   0.00082  111 3  11 22  0.46    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.14u 0.17s 18.31t   Elapsed:  00:00:01
  Total cpu time:  18.15u 0.17s 18.32t   Elapsed:  00:00:01
  Start:  Thu May  9 21:18:06 2013   End:  Thu May  9 21:18:07 2013

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