Query 046726
Match_columns 161
No_of_seqs 160 out of 1156
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 03:54:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046726.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046726hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00167 aquaporin TIP5; Provi 100.0 8.6E-32 1.9E-36 213.2 18.0 161 1-161 4-164 (256)
2 KOG0223 Aquaporin (major intri 100.0 1.2E-31 2.6E-36 209.4 14.5 146 10-160 2-151 (238)
3 PLN00184 aquaporin NIP1; Provi 100.0 9.1E-31 2E-35 210.8 17.9 143 14-161 49-198 (296)
4 COG0580 GlpF Glycerol uptake f 100.0 1.9E-31 4E-36 208.0 13.3 142 17-160 3-155 (241)
5 PF00230 MIP: Major intrinsic 100.0 8E-31 1.7E-35 204.4 16.9 149 12-160 1-154 (227)
6 PTZ00016 aquaglyceroporin; Pro 100.0 2.6E-30 5.7E-35 208.4 17.3 146 11-161 42-204 (294)
7 PLN00182 putative aquaporin NI 100.0 4.7E-30 1E-34 205.6 18.2 140 16-160 39-178 (283)
8 PLN00027 aquaporin TIP; Provis 100.0 4.6E-30 9.9E-35 203.2 17.5 152 9-160 10-161 (252)
9 KOG0224 Aquaporin (major intri 100.0 6.1E-32 1.3E-36 213.8 6.7 146 11-160 24-187 (316)
10 PLN00026 aquaporin NIP; Provi 100.0 4.6E-30 1E-34 206.6 17.0 141 14-160 66-206 (298)
11 PLN00166 aquaporin TIP2; Provi 100.0 8E-30 1.7E-34 201.5 17.6 152 9-160 8-159 (250)
12 PRK05420 aquaporin Z; Provisio 100.0 9.9E-29 2.1E-33 193.4 16.5 138 19-160 2-151 (231)
13 PLN00183 putative aquaporin NI 100.0 1.2E-27 2.7E-32 190.9 17.5 140 15-160 41-180 (274)
14 cd00333 MIP Major intrinsic pr 99.9 8.6E-27 1.9E-31 182.1 14.5 137 20-160 1-149 (228)
15 TIGR00861 MIP MIP family chann 99.9 4.9E-26 1.1E-30 176.5 15.5 137 24-160 1-141 (216)
16 PLN00183 putative aquaporin NI 99.8 4.1E-18 8.8E-23 136.3 10.8 112 17-139 159-270 (274)
17 cd00333 MIP Major intrinsic pr 99.8 4.1E-18 8.8E-23 133.2 9.9 102 13-122 124-227 (228)
18 PLN00182 putative aquaporin NI 99.8 5.7E-18 1.2E-22 135.9 10.7 99 16-125 156-254 (283)
19 PLN00026 aquaporin NIP; Provi 99.7 1.3E-17 2.7E-22 134.6 10.2 101 16-127 184-284 (298)
20 KOG0223 Aquaporin (major intri 99.7 1.2E-17 2.6E-22 130.7 5.6 110 6-127 119-228 (238)
21 TIGR00861 MIP MIP family chann 99.7 6.3E-17 1.4E-21 125.5 8.4 96 16-119 119-215 (216)
22 PLN00184 aquaporin NIP1; Provi 99.6 1.2E-15 2.5E-20 123.3 10.8 101 16-127 175-275 (296)
23 PLN00166 aquaporin TIP2; Provi 99.6 1.9E-15 4.1E-20 119.6 11.5 103 16-127 137-239 (250)
24 PLN00027 aquaporin TIP; Provis 99.6 7.4E-15 1.6E-19 116.5 12.3 103 15-126 138-240 (252)
25 PRK05420 aquaporin Z; Provisio 99.6 3.3E-15 7.1E-20 117.1 10.0 101 16-127 129-230 (231)
26 PTZ00016 aquaglyceroporin; Pro 99.6 1.1E-14 2.3E-19 117.8 10.4 104 15-127 180-292 (294)
27 PLN00167 aquaporin TIP5; Provi 99.6 1.7E-14 3.6E-19 114.6 9.7 103 15-127 140-242 (256)
28 PF00230 MIP: Major intrinsic 99.5 3.7E-14 8E-19 110.5 10.1 102 10-120 126-227 (227)
29 COG0580 GlpF Glycerol uptake f 99.5 3.7E-14 8E-19 111.1 9.7 100 16-125 133-240 (241)
30 KOG0224 Aquaporin (major intri 98.8 3.1E-09 6.7E-14 85.1 3.8 107 10-125 159-275 (316)
31 PF01226 Form_Nir_trans: Forma 89.3 7.7 0.00017 30.8 10.5 104 54-159 54-169 (250)
32 COG2116 FocA Formate/nitrite f 71.7 51 0.0011 26.5 15.2 102 55-158 62-176 (265)
33 PRK10805 formate transporter; 68.7 62 0.0013 26.3 13.7 101 56-159 67-180 (285)
34 PF03033 Glyco_transf_28: Glyc 57.0 3 6.6E-05 29.0 -0.3 20 77-96 6-25 (139)
35 PRK09713 focB putative formate 55.6 1.1E+02 0.0024 24.8 13.3 101 56-159 66-179 (282)
36 TIGR00790 fnt formate/nitrite 50.3 1.2E+02 0.0026 23.7 12.7 102 56-159 42-156 (239)
37 PRK12446 undecaprenyldiphospho 49.3 3.5 7.5E-05 34.2 -1.2 21 75-95 7-27 (352)
38 COG0701 Predicted permeases [G 45.1 46 0.00099 27.5 4.7 47 78-125 101-148 (317)
39 TIGR02587 putative integral me 41.7 1.9E+02 0.0041 23.4 8.0 58 96-153 96-153 (271)
40 PF14034 Spore_YtrH: Sporulati 38.1 91 0.002 21.4 4.5 47 80-126 53-101 (102)
41 COG1953 FUI1 Cytosine/uracil/t 35.1 3.2E+02 0.0069 24.2 9.7 117 8-125 264-412 (497)
42 PRK14213 camphor resistance pr 31.7 83 0.0018 21.9 3.7 30 95-124 88-117 (118)
43 PRK09979 putative rho operon l 30.2 24 0.00052 18.4 0.6 14 77-90 5-18 (33)
44 PRK14200 camphor resistance pr 28.5 1.2E+02 0.0026 21.5 4.1 30 95-124 95-124 (127)
45 PF09512 ThiW: Thiamine-precur 25.4 2.8E+02 0.0061 20.4 6.4 26 99-124 123-148 (150)
46 PF14990 DUF4516: Domain of un 24.9 1.6E+02 0.0034 17.3 4.0 33 96-128 4-36 (47)
47 PF13940 Ldr_toxin: Toxin Ldr, 24.5 1.3E+02 0.0029 16.3 3.0 22 103-124 11-32 (35)
48 PRK14207 camphor resistance pr 24.2 1.4E+02 0.003 21.0 3.8 29 95-123 92-120 (123)
49 PRK14205 camphor resistance pr 23.5 1.5E+02 0.0032 20.7 3.8 29 95-123 87-115 (118)
50 PRK14223 camphor resistance pr 22.8 1.5E+02 0.0033 20.7 3.8 29 95-123 89-117 (122)
51 PRK14220 camphor resistance pr 22.7 1.5E+02 0.0033 20.7 3.8 29 95-123 88-116 (120)
52 PRK14202 camphor resistance pr 22.4 1.6E+02 0.0034 20.8 3.8 29 95-123 95-123 (128)
53 PRK14198 camphor resistance pr 21.6 1.7E+02 0.0036 20.6 3.8 29 95-123 91-119 (124)
54 KOG2533 Permease of the major 21.5 1.1E+02 0.0023 26.9 3.3 56 98-158 168-223 (495)
55 PRK14225 camphor resistance pr 21.1 1.7E+02 0.0037 21.0 3.8 29 95-123 103-131 (137)
56 PRK14201 camphor resistance pr 21.0 1.8E+02 0.0039 20.3 3.8 29 95-123 88-116 (121)
57 PRK14226 camphor resistance pr 21.0 1.8E+02 0.0038 20.7 3.8 30 95-124 96-125 (130)
58 PRK11375 allantoin permease; P 20.9 5.6E+02 0.012 22.2 9.0 25 77-101 325-349 (484)
59 PRK14230 camphor resistance pr 20.5 1.8E+02 0.004 20.2 3.8 29 95-123 86-114 (119)
60 PRK14214 camphor resistance pr 20.5 1.8E+02 0.004 20.2 3.8 28 95-122 88-115 (118)
61 PF01384 PHO4: Phosphate trans 20.5 4.9E+02 0.011 21.4 9.5 28 97-124 113-145 (326)
62 PRK14195 camphor resistance pr 20.2 1.8E+02 0.004 20.3 3.8 29 95-123 92-120 (125)
No 1
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=8.6e-32 Score=213.25 Aligned_cols=161 Identities=78% Similarity=1.169 Sum_probs=136.0
Q ss_pred CCCccccccccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 046726 1 MASTTLTARFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISG 80 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG 80 (161)
|.|++...+.|+...++++|++++||+||++++++++++....+...+++...+.+++.+++.+|+++++.+++++++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSG 83 (256)
T PLN00167 4 MAPTSLSARFQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISG 83 (256)
T ss_pred ccCCCCcCchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccc
Confidence 56788888899999999999999999999999999999876432111222222346788999999999999999999999
Q ss_pred CCCchHHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 81 GHVNPAVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 81 ~hlNPAvtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+|+|||||++.++.|+++|.+.+.|+++|++|+++|+.+++.++++...+.....++.+.+++++.|+++|++|++++++
T Consensus 84 ah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~ 163 (256)
T PLN00167 84 GHVNPAVTFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYA 163 (256)
T ss_pred cccCHHHHHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887664433333445567889999999999999999986
Q ss_pred C
Q 046726 161 A 161 (161)
Q Consensus 161 ~ 161 (161)
+
T Consensus 164 ~ 164 (256)
T PLN00167 164 A 164 (256)
T ss_pred h
Confidence 3
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.2e-31 Score=209.41 Aligned_cols=146 Identities=36% Similarity=0.519 Sum_probs=131.0
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
..+..+++.+|++++||++|++++|.+|++...+++ ...+.+.+.+++.+|+.+++.+++++++||+|+|||||+
T Consensus 2 ~~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~ 76 (238)
T KOG0223|consen 2 SGELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTL 76 (238)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHH
Confidence 356778999999999999999999999999876542 123457889999999999999999999999999999999
Q ss_pred HHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC----CCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 90 AKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQ----NIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 90 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
++++.|++++.+...|+++|++|+++|+.+.+.+.+++ ....+.++++.+.+|+++.|++.||.|++++++
T Consensus 77 a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~ 151 (238)
T KOG0223|consen 77 AFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFA 151 (238)
T ss_pred HHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEE
Confidence 99999999999999999999999999999999999884 234456788899999999999999999999886
No 3
>PLN00184 aquaporin NIP1; Provisional
Probab=99.97 E-value=9.1e-31 Score=210.84 Aligned_cols=143 Identities=27% Similarity=0.347 Sum_probs=119.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q 046726 14 VTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAV 93 (161)
Q Consensus 14 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l 93 (161)
.+.+++|++++||+||++|+|++++++.... .++ ....++.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~--~~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al 123 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNM--QND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFAS 123 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHH
Confidence 3446789999999999999999998875322 111 11356778999999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC---c----ccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Q 046726 94 SGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNI---P----AYTIAQEMTGFGASLLEGVLTFALVYTVYAA 161 (161)
Q Consensus 94 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---~----~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~ 161 (161)
.|+++|.+.+.|+++|++|+++|+++++.+++.+.. . .+.+.+..+.+++|+.|+++|++|+++++++
T Consensus 124 ~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~ 198 (296)
T PLN00184 124 CGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGV 198 (296)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999998864321 1 1223344689999999999999999999863
No 4
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.9e-31 Score=208.03 Aligned_cols=142 Identities=31% Similarity=0.362 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcC
Q 046726 17 EALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGH 96 (161)
Q Consensus 17 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~ 96 (161)
+..|++++||+||+++++.+++++...... +.+....+++.+++++|+++++.+|.++++||+|+|||||++.++.|+
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~--~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~ 80 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALK--GSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR 80 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhc--cccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC
Confidence 457888999999999999999998654322 222334578889999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC----------cccccCCC-CchHHHHHHHHHHHHHHHHHHHc
Q 046726 97 ITVPTALFYWVSQMLASVMASLLLRVTAIGQNI----------PAYTIAQE-MTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 97 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
++|++.+.||++|++|+++|+.+.+.++++... ..+++.|. .+..++|+.|+++|++|+++|++
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila 155 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILA 155 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998876321 22344444 47899999999999999999987
No 5
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.97 E-value=8e-31 Score=204.36 Aligned_cols=149 Identities=31% Similarity=0.372 Sum_probs=124.7
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCcc-CCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 12 QSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAA-SNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 12 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
|.++++++|++++||+||++++|.++++.........+.. ....+...+++.+|+.+++.++.++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 4567899999999999999999999986653222221111 112367889999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC--CC--cccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQ--NI--PAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~--~~--~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.++.|+++|++.+.|+++|++|+++|+.+.+.++++. .. ....+.++.+..++++.|+++|++|++++++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~ 154 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILA 154 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhh
Confidence 9999999999999999999999999999999998873 22 2335677889999999999999999999875
No 6
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.97 E-value=2.6e-30 Score=208.37 Aligned_cols=146 Identities=25% Similarity=0.348 Sum_probs=121.7
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 11 NQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 11 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
++...++++|++++||+||++++|+++++..... .++ ++.+.+.+++++|+++++.+++++++||+|+|||||++
T Consensus 42 ~~~~~~~~~~~~laEfigT~llvf~g~g~~~~~~--~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla 116 (294)
T PTZ00016 42 APREYRPNVREYVAEFLGTFVLLFFGEGVVATTH--TVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLG 116 (294)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHH
Confidence 3444478889999999999999999998874321 111 12356678999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC-----------------CcccccCCCCchHHHHHHHHHHHHH
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN-----------------IPAYTIAQEMTGFGASLLEGVLTFA 153 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~E~~~T~~ 153 (161)
+++.|+++|.+.+.|+++|++|+++|+++.+.++++.. ...+.+.|+.+..++++.|+++|++
T Consensus 117 ~~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~i 196 (294)
T PTZ00016 117 NAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAI 196 (294)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876520 0123445667889999999999999
Q ss_pred HHHHHHcC
Q 046726 154 LVYTVYAA 161 (161)
Q Consensus 154 L~~~il~~ 161 (161)
|+++++++
T Consensus 197 Lv~~ila~ 204 (294)
T PTZ00016 197 LLLVILAI 204 (294)
T ss_pred HHHHHHHh
Confidence 99999863
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.97 E-value=4.7e-30 Score=205.57 Aligned_cols=140 Identities=23% Similarity=0.288 Sum_probs=119.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+++|++++|++||++|+|.+++++.... . .+ +......+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~-~-~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~ 113 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNV-L-YG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFR 113 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-c-cC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHc
Confidence 36789999999999999999999875322 1 11 1124667889999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++|.+.+.|+++|++|+++|+++.+.+++......+.+.|+.+.+++++.|+++|++|++++++
T Consensus 114 ~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~ 178 (283)
T PLN00182 114 RFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISG 178 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988653333344556678999999999999999999875
No 8
>PLN00027 aquaporin TIP; Provisional
Probab=99.97 E-value=4.6e-30 Score=203.23 Aligned_cols=152 Identities=45% Similarity=0.707 Sum_probs=126.8
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHH
Q 046726 9 RFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVT 88 (161)
Q Consensus 9 ~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvt 88 (161)
+.++...++.+|++++||++|+++++.++++....+....+....+.+.+.+++++|+++++.+++++++||+|+|||||
T Consensus 10 ~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvt 89 (252)
T PLN00027 10 TPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVT 89 (252)
T ss_pred chHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHH
Confidence 33444467889999999999999999999887532211111111123567889999999999999999999999999999
Q ss_pred HHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 89 FAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 89 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++++.|+++|.+.+.|+++|++|+++|+.+.+.+.++.....+.+.++.+.+++++.|+++|++|++++++
T Consensus 90 l~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~ 161 (252)
T PLN00027 90 FGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYA 161 (252)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887665445566677889999999999999999999985
No 9
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.1e-32 Score=213.82 Aligned_cols=146 Identities=25% Similarity=0.331 Sum_probs=125.0
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 11 NQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 11 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
+...++++.|++++||+||+++++++++++.... .++. ..++++.+.++||+++++.+|+.+++||+|+|||||++
T Consensus 24 ~~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~v--ls~g--~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a 99 (316)
T KOG0224|consen 24 KLHIRNELLREFLAEFLGTFVLVVFGLGSVAQAV--LSGG--TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLA 99 (316)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhccceeEEEE--eccC--CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHH
Confidence 3445678899999999999999999999885432 2211 22477888999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC----------------Ccc--cccCCCCchHHHHHHHHHHHH
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN----------------IPA--YTIAQEMTGFGASLLEGVLTF 152 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~~E~~~T~ 152 (161)
+++.||++|+|.++|+++|++||++|++.+|.++.+.. .+. ..|+|..+.+++|+.|+++|.
T Consensus 100 ~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa 179 (316)
T KOG0224|consen 100 MCILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTA 179 (316)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999887631 012 246678999999999999999
Q ss_pred HHHHHHHc
Q 046726 153 ALVYTVYA 160 (161)
Q Consensus 153 ~L~~~il~ 160 (161)
+|+..+++
T Consensus 180 ~L~~~l~a 187 (316)
T KOG0224|consen 180 MLVLCLFA 187 (316)
T ss_pred HHHhheeE
Confidence 99998876
No 10
>PLN00026 aquaporin NIP; Provisional
Probab=99.97 E-value=4.6e-30 Score=206.56 Aligned_cols=141 Identities=27% Similarity=0.314 Sum_probs=118.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q 046726 14 VTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAV 93 (161)
Q Consensus 14 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l 93 (161)
...+.+|++++||+||++|+|+++++....++. + .....+.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 66 ~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~--~---~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al 140 (298)
T PLN00026 66 PDVSLTRKLGAEFVGTFILIFAATAGPIVNQKY--D---GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAA 140 (298)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--C---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHH
Confidence 355678999999999999999999765432211 1 11356778899999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 94 SGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 94 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.++++|.+.+.|+++|++|+++|+++++.++++...... +.++.+.+++++.|+++|++|++++++
T Consensus 141 ~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~-t~p~~s~~~a~~~Efi~TfiLv~vi~~ 206 (298)
T PLN00026 141 LRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSGGV-TVPSVSTGQAFALEFIITFNLLFVVTA 206 (298)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCce-eeecccHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999999999999999999999876332222 235678999999999999999999875
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=99.97 E-value=8e-30 Score=201.47 Aligned_cols=152 Identities=48% Similarity=0.757 Sum_probs=125.1
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHH
Q 046726 9 RFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVT 88 (161)
Q Consensus 9 ~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvt 88 (161)
+.++..+++.+|++++|++||+++++.++++.....+..++...++...+.+++++|+.+++.+++++++||+|+|||||
T Consensus 8 ~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt 87 (250)
T PLN00166 8 SLGDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVT 87 (250)
T ss_pred chHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHH
Confidence 34454567889999999999999999999987542111111111123567789999999999999999999999999999
Q ss_pred HHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 89 FAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 89 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++++.|+++|.+.+.|+++|++|+++|+.+.+.+++++..+.....++.+..++++.|+++|++|++++++
T Consensus 88 ~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~ 159 (250)
T PLN00166 88 LGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYA 159 (250)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988664333333455678999999999999999999985
No 12
>PRK05420 aquaporin Z; Provisional
Probab=99.96 E-value=9.9e-29 Score=193.38 Aligned_cols=138 Identities=25% Similarity=0.384 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCC
Q 046726 19 LRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHIT 98 (161)
Q Consensus 19 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~ 98 (161)
+|++++||+||++++|.++++....++. + .++.+.+.+++++|+.+++.+++++++||+|+|||||+++++.|+++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~-~---~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~ 77 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAF-P---ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFP 77 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhccc-C---CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCC
Confidence 6899999999999999999876432211 1 11235677899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcCCCC-c----cc------c-cCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 99 VPTALFYWVSQMLASVMASLLLRVTAIGQNI-P----AY------T-IAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 99 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-~----~~------~-~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
|++.+.|+++|++|+++|+.+.+.+++++.. . .+ . .+...+..++++.|+++|++|++++++
T Consensus 78 ~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~ 151 (231)
T PRK05420 78 AKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILG 151 (231)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988765321 0 01 1 122357899999999999999999985
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.96 E-value=1.2e-27 Score=190.93 Aligned_cols=140 Identities=26% Similarity=0.311 Sum_probs=118.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
+.+.+|++++|+++|++++|++++.....+ . .+ +..+.+..++.+|+.+++.+++++++||+|+|||||+++++.
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~-~-~~---~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~ 115 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQ-L-SG---GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATF 115 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-cC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 346789999999999999999998875422 1 11 113566789999999999999999999999999999999999
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
|+++|.+.+.|+++|++|+++|+.+++.+++.+. ....+.|..+.+++++.|+++|++|++.+++
T Consensus 116 g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~ 180 (274)
T PLN00183 116 GHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAAS 180 (274)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhhe
Confidence 9999999999999999999999999998886532 2334445567899999999999999998875
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.95 E-value=8.6e-27 Score=182.13 Aligned_cols=137 Identities=36% Similarity=0.495 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCc
Q 046726 20 RSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITV 99 (161)
Q Consensus 20 ~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~ 99 (161)
|++++|++||+++++.++++....+. +++ .+.+.+.+++.+|+.+.+.+++++++||+|+|||+|+++++.|+++|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~--~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~ 76 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKL--AGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPL 76 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccc--cCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCH
Confidence 57899999999999999998754321 111 12356788999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHhcCCCC----c------c--cccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 100 PTALFYWVSQMLASVMASLLLRVTAIGQNI----P------A--YTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 100 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~----~------~--~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.+.+.|+++|++|+++|+.+.+.+++++.. . . ..+.++.+..++++.|+++|++|++.+++
T Consensus 77 ~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~ 149 (228)
T cd00333 77 IRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFA 149 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876321 1 1 12345668999999999999999999875
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.94 E-value=4.9e-26 Score=176.54 Aligned_cols=137 Identities=29% Similarity=0.364 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhH
Q 046726 24 AEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTAL 103 (161)
Q Consensus 24 ~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~ 103 (161)
+||+||+++++.++++....+........++.+...+++.+|+.+...+++++++||+|+|||||+++++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987543221100111112567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCC---ccc-ccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 104 FYWVSQMLASVMASLLLRVTAIGQNI---PAY-TIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 104 ~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~~-~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.|+++|++|+++|+.+.+.+++++.. ... ...++.+..++++.|+++|++|+++++.
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~ 141 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFA 141 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999999999999998876421 111 2234568999999999999999999875
No 16
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.76 E-value=4.1e-18 Score=136.29 Aligned_cols=112 Identities=17% Similarity=0.305 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcC
Q 046726 17 EALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGH 96 (161)
Q Consensus 17 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~ 96 (161)
+.++.++.|+++|+++++.+++.....+ .. +. ..++.+|+.+++.++..+++||+|+|||||+++++.+
T Consensus 159 ~~~~~~~~E~v~T~iLv~~i~~~~~~~~-----~~----~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~- 227 (274)
T PLN00183 159 GCSSAFWVEFIATFIVMFLAASLTSQPQ-----SL----GH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS- 227 (274)
T ss_pred cHHHHHHHHHHHHHHHHHhhheeecccc-----CC----CC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-
Confidence 4689999999999999999887663211 10 11 2378899999999999999999999999999999986
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCc
Q 046726 97 ITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMT 139 (161)
Q Consensus 97 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~ 139 (161)
.+|.+.|+||++|++|+++|+++++.+..++.......+|+.|
T Consensus 228 ~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 228 WDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred CChhheehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 5899999999999999999999999998776554455555554
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.76 E-value=4.1e-18 Score=133.19 Aligned_cols=102 Identities=20% Similarity=0.316 Sum_probs=86.2
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHH
Q 046726 13 SVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKA 92 (161)
Q Consensus 13 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~ 92 (161)
..+.+.+|.++.|+++|+++++.++......+. . .+....++.+|+.+...++..++.||+|+|||+|+++.
T Consensus 124 ~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~----~----~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~ 195 (228)
T cd00333 124 SPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG----P----PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPA 195 (228)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHcccccc----C----CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHH
Confidence 344578999999999999999999887632211 0 12234689999999999999999999999999999999
Q ss_pred HhcCC--CcchhHHHHHHHhHHHHHHHHHHHH
Q 046726 93 VSGHI--TVPTALFYWVSQMLASVMASLLLRV 122 (161)
Q Consensus 93 l~g~~--~~~~~~~yi~aQ~lGa~~g~~l~~~ 122 (161)
+.++. +|++.|+||++|++|+++|+++++.
T Consensus 196 i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 196 LFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred HHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 99887 7999999999999999999998764
No 18
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.76 E-value=5.7e-18 Score=135.94 Aligned_cols=99 Identities=23% Similarity=0.385 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.++.+++|+++|+++++.+++.....+ .. .. ..++++|+.+++.++..+++||+|+|||||+++++.+
T Consensus 156 ~s~~~a~~~E~l~TfiLv~~i~~~~~~~~-----~~---~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~ 225 (283)
T PLN00182 156 DSSGQALVAEIIISFLLMFVISGVATDSR-----AV---GE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVM 225 (283)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhheeccc-----cC---Cc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHh
Confidence 35689999999999999999887652211 11 11 2588999999999999999999999999999999975
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
+ .|.+.|+||++|++|+++|+++++.+..
T Consensus 226 ~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 226 G-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred c-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 5899999999999999999999998874
No 19
>PLN00026 aquaporin NIP; Provisional
Probab=99.74 E-value=1.3e-17 Score=134.63 Aligned_cols=101 Identities=23% Similarity=0.331 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.++.++.|+++|+++++++++.....+ .. .. ..++++|+.+++.++..++.||+|+|||||+++++.+
T Consensus 184 ~s~~~a~~~Efi~TfiLv~vi~~v~~~~~-----~~---~~--~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~ 253 (298)
T PLN00026 184 VSTGQAFALEFIITFNLLFVVTAVATDTR-----AV---GE--LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAA 253 (298)
T ss_pred ccHHHHHHHHHHHHHHHHHhheeeecCCC-----Cc---CC--ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhc
Confidence 36789999999999999999885431111 10 01 2468999999999999999999999999999999987
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
+ +|.+.|+||++|++|+++|+++++.+...+
T Consensus 254 ~-~~~~~wVy~vaPilGAilga~ly~~~~~~~ 284 (298)
T PLN00026 254 G-NYRAIWIYLVAPTLGALAGAGTYTAVKLRE 284 (298)
T ss_pred C-CchheeHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 6 899999999999999999999988875443
No 20
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.2e-17 Score=130.75 Aligned_cols=110 Identities=25% Similarity=0.358 Sum_probs=93.3
Q ss_pred ccccccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCch
Q 046726 6 LTARFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNP 85 (161)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNP 85 (161)
..+...+....+.+|.++.|++.||.+++.+++.....+ +....++.+|+.+.+.++..+++||++|||
T Consensus 119 ~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~-----------~~~~a~l~IG~~v~~~~l~~g~~TG~sMNP 187 (238)
T KOG0223|consen 119 GLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPR-----------RSELAPLAIGFSVGLNILAAGPFTGASMNP 187 (238)
T ss_pred CcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCC-----------CcccHHHHHHHHHHHHHHeecCcCcCccCc
Confidence 344455666667899999999999999999987331111 114669999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 86 AVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 86 Avtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
|+++++++..+. |.+.|+||++|++|+++++++++.++.++
T Consensus 188 ArSfGpAvv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 188 ARSFGPAVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHhhHHHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999998774 99999999999999999999999998776
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.70 E-value=6.3e-17 Score=125.53 Aligned_cols=96 Identities=17% Similarity=0.270 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.++.++.|+++|+++++.++......+ +.. +....++.+|+.+...++..+++||+|+|||||+++.+.+
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~----~~~----~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~ 190 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRN----RVP----RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFA 190 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCC----CCC----CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHh
Confidence 47799999999999999999987663211 100 1114689999999999999999999999999999999965
Q ss_pred -CCCcchhHHHHHHHhHHHHHHHHH
Q 046726 96 -HITVPTALFYWVSQMLASVMASLL 119 (161)
Q Consensus 96 -~~~~~~~~~yi~aQ~lGa~~g~~l 119 (161)
+.+|.+.|+|+++|++|+++++.+
T Consensus 191 ~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 191 GLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ccccccceeHHHHHHHHHHHHHHHh
Confidence 578999999999999999999875
No 22
>PLN00184 aquaporin NIP1; Provisional
Probab=99.65 E-value=1.2e-15 Score=123.31 Aligned_cols=101 Identities=23% Similarity=0.349 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.++.++.|+++|++|++.+++....++ .. + -..++.+|+.+.+.++..++.||+++||||+|++.+..
T Consensus 175 ~s~~~af~~E~i~TfvLv~~il~~~~~~~-----~~----~-~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~ 244 (296)
T PLN00184 175 GSDLQAFVMEFIVTFYLMFIISGVATDNR-----AI----G-ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVY 244 (296)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHheeccCc-----CC----C-cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHh
Confidence 36789999999999999999987653211 00 1 13478999999999999999999999999999999964
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
. .|++.|+||++|++|+++|+++++.+...+
T Consensus 245 ~-~~~~~WVy~vgPilGa~laal~y~~l~~~~ 275 (296)
T PLN00184 245 G-CYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275 (296)
T ss_pred h-cccccchHHhHHHHHHHHHHHHHHHHhcCC
Confidence 4 578999999999999999999998887543
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.64 E-value=1.9e-15 Score=119.63 Aligned_cols=103 Identities=29% Similarity=0.466 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.++.++.|+++|+++++.++......++ .. .....++.+|+.+...+...++.||+.+||||++++.+..
T Consensus 137 ~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~---~~-----~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~ 208 (250)
T PLN00166 137 LGAIEGVVMEIVVTFALVYTVYATAADPKK---GS-----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVS 208 (250)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcccccc---cc-----cccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhc
Confidence 466899999999999999999876532110 00 1124589999999999999999999999999999999975
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
. +|.+.|+||++|++|+++++++++.++.+.
T Consensus 209 ~-~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~ 239 (250)
T PLN00166 209 G-DFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239 (250)
T ss_pred C-CCcccchhhHHHHHHHHHHHHHHHHHhccc
Confidence 4 688999999999999999999998876543
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.62 E-value=7.4e-15 Score=116.47 Aligned_cols=103 Identities=25% Similarity=0.433 Sum_probs=85.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+.++.++.|+++|+++++.++......+ +.+ .....++.+|+.+...++..++.||+.+||||++++.+.
T Consensus 138 ~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~---~~~-----~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~ 209 (252)
T PLN00027 138 GVGVWNAFVFEIVMTFGLVYTVYATAVDPK---KGD-----LGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209 (252)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHhccccc---cCC-----ccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHH
Confidence 446789999999999999999876542111 000 112458899999999999999999999999999999997
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIG 126 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 126 (161)
.. .|.+.|+||++|++|+++|+++++.++.+
T Consensus 210 ~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 210 SW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred hh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54 68899999999999999999999998754
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.62 E-value=3.3e-15 Score=117.10 Aligned_cols=101 Identities=20% Similarity=0.348 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
.+..+.++.|+++|+++++.++...+.++ . .+ ..++.+|+.+....+..++.||+.+||||++++.+..
T Consensus 129 ~~~~~~~~~E~v~T~iLv~~i~~~~~~~~-----~----~~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~ 197 (231)
T PRK05420 129 YSLLAALVCEVVLTAFFLLVILGATDKRA-----P----AG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFV 197 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCC-----C----Cc--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHh
Confidence 46789999999999999999987663211 0 11 3588999999999999999999999999999998863
Q ss_pred -CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 96 -HITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 96 -~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
..++.+.|+||++|++|+++++++++.+..++
T Consensus 198 g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 198 GGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred CCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 33456889999999999999999999887665
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.59 E-value=1.1e-14 Score=117.85 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
+.+..+.++.|+++|+++++.++...+..+. .. .+ ..++.+|+.+.+.....++.||+.+||||++++.+.
T Consensus 180 ~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~-----~~--~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~ 250 (294)
T PTZ00016 180 REGNFYAIFSELILTAILLLVILAITDPNNC-----PA--FN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLF 250 (294)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHhccCccC-----CC--cC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHH
Confidence 3467899999999999999999877643211 00 01 247889999999999999999999999999998885
Q ss_pred -----cCCCcc----hhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 -----GHITVP----TALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 -----g~~~~~----~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
|+..|. +.|+||++|++|+++|+++++.+.+++
T Consensus 251 ~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 251 SAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred HHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 333454 589999999999999999999887654
No 27
>PLN00167 aquaporin TIP5; Provisional
Probab=99.57 E-value=1.7e-14 Score=114.61 Aligned_cols=103 Identities=23% Similarity=0.347 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
+.+.++.++.|+++|+++++.++...+..+ .. .....++.+|+.+....+..++.||+.+||||++++.+.
T Consensus 140 ~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~-----~~----~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~ 210 (256)
T PLN00167 140 EMTGFGASVLEGVLTFGLVYTVYAAGDPRR-----GL----LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVV 210 (256)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccccc-----cC----CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHh
Confidence 345678999999999999999886553211 00 111347889999999999999999999999999999987
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
.. +|.+.|+||++|++|+++++++++.++.++
T Consensus 211 ~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 211 AG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred cc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 54 578889999999999999999999888654
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.55 E-value=3.7e-14 Score=110.50 Aligned_cols=102 Identities=23% Similarity=0.386 Sum_probs=82.3
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
..+..+.+.++.++.|+++|+++++.+....+..++.. .+. ..++.+|+.+....+..++.||+.+||||++
T Consensus 126 ~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~-------~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~ 197 (227)
T PF00230_consen 126 TTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFP-------LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARAL 197 (227)
T ss_dssp CGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST-------SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHH
T ss_pred ccccccchhhhhhhhhhhhhhHHHhhhhhhcccccccc-------ccc-ccceeEEEEEeecccccccccccccCchhhc
Confidence 34455667899999999999999999887764332111 011 3488899999999999999999999999999
Q ss_pred HHHHhcCCCcchhHHHHHHHhHHHHHHHHHH
Q 046726 90 AKAVSGHITVPTALFYWVSQMLASVMASLLL 120 (161)
Q Consensus 90 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~ 120 (161)
++.+.... |.+.|+||++|++|+++|++++
T Consensus 198 g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 198 GPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred Cceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 99887664 9999999999999999999874
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.54 E-value=3.7e-14 Score=111.06 Aligned_cols=100 Identities=15% Similarity=0.245 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh-
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS- 94 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~- 94 (161)
++.++.++.|+++|++|++.+.+.....+. + +. ..++.+|+.++.++.+.++.||..+||||++++.+.
T Consensus 133 ~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~----~-----~~-~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~ 202 (241)
T COG0580 133 YSLGQAFLIEFVGTFVLVLGILALTDDGNA----N-----AG-FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAH 202 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCcc----c-----cc-chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHH
Confidence 377899999999999999999886632110 0 11 458999999999999999999999999999998883
Q ss_pred ---cCCC----cchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 95 ---GHIT----VPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 95 ---g~~~----~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
+..+ .++.|+|+++|++|+++|+++++.++.
T Consensus 203 ~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 203 SLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred HhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 3111 158999999999999999999987654
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.82 E-value=3.1e-09 Score=85.07 Aligned_cols=107 Identities=9% Similarity=0.084 Sum_probs=84.1
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
.-|...-++++.++-|++||.+|+.+.+...+..+ +...-.-++.+|+.++++..+.|--+|..+||||++
T Consensus 159 TyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN---------~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDl 229 (316)
T KOG0224|consen 159 TYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRN---------PIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDL 229 (316)
T ss_pred ecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCC---------CCCcchhHHHHHHHHHHHHHHhhcccCcccCccccc
Confidence 34556778999999999999999999887775432 223334589999999999999999999999999999
Q ss_pred HHHHh------cC--CCc--chhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 90 AKAVS------GH--ITV--PTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 90 a~~l~------g~--~~~--~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
++-+. |. +++ .-.|+-++++++|+++|++++....+
T Consensus 230 gPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig 275 (316)
T KOG0224|consen 230 GPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIG 275 (316)
T ss_pred chHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeee
Confidence 96664 11 111 34566789999999999999887654
No 31
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=89.35 E-value=7.7 Score=30.79 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=60.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHHHH----HHhHHHHHHHHHHHHHhcCCCC
Q 046726 54 TSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFYWV----SQMLASVMASLLLRVTAIGQNI 129 (161)
Q Consensus 54 ~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~~~~~ 129 (161)
+...+..++.+++++..++..-+..- -=|-......++.||.+|++.+--|. +.++|+++-+.+.+..-.....
T Consensus 54 g~~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~ 131 (250)
T PF01226_consen 54 GLAKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSS 131 (250)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTT
T ss_pred cHHHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 34566778888888888887765542 23555555667788999988665555 4455555544444433222111
Q ss_pred cc--------cccCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 130 PA--------YTIAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 130 ~~--------~~~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
+. -...-..+.++.|+-=+++.++..+.+.
T Consensus 132 ~~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~ 169 (250)
T PF01226_consen 132 PAMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVW 169 (250)
T ss_dssp THHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 10 0111234788888888888888877664
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=71.72 E-value=51 Score=26.55 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=57.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHh--cC--CC-C
Q 046726 55 SSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTA--IG--QN-I 129 (161)
Q Consensus 55 ~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~--~~--~~-~ 129 (161)
...+..++.+++++.+.++.-+..=-+ |=-........++++|++.+--|.-=.+|=++|+++..+++ .+ .. .
T Consensus 62 ~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 62 LAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred hHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 367778888888888888876654211 22222334557889998776655544444444444443333 11 11 1
Q ss_pred ccc-----ccC---CCCchHHHHHHHHHHHHHHHHHH
Q 046726 130 PAY-----TIA---QEMTGFGASLLEGVLTFALVYTV 158 (161)
Q Consensus 130 ~~~-----~~~---~~~~~~~~~~~E~~~T~~L~~~i 158 (161)
+.+ ... -+.+..|.|+.-.++.++.++.+
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAv 176 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAV 176 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 111 111 23356787777777777766655
No 33
>PRK10805 formate transporter; Provisional
Probab=68.65 E-value=62 Score=26.26 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHH----HHHHhHHHHHHHHHHHHHhcCC-CCc
Q 046726 56 SLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFY----WVSQMLASVMASLLLRVTAIGQ-NIP 130 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~y----i~aQ~lGa~~g~~l~~~~~~~~-~~~ 130 (161)
..+..++.+..++.+++..-+..--+ |--.+.+ .+.||.+|++.+-. .++.++|+++-+.+.+..-.-. ..+
T Consensus 67 ~~ll~~~~F~vGlilIvl~g~eLFTg--n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T PRK10805 67 AKLVGGICFSLGLILCVVCGADLFTS--TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccchh--hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcc
Confidence 45556777777777777765553222 5444443 57788899887744 4466666666555543321000 000
Q ss_pred cc-----cc---CCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 131 AY-----TI---AQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 131 ~~-----~~---~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
.. .. .-..+.++.|+-=+++.++.++.+.
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~ 180 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVW 180 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 1134677888877788877776654
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=57.04 E-value=3 Score=28.97 Aligned_cols=20 Identities=30% Similarity=0.491 Sum_probs=16.5
Q ss_pred cCCCCCCchHHHHHHHHhcC
Q 046726 77 NISGGHVNPAVTFAKAVSGH 96 (161)
Q Consensus 77 ~iSG~hlNPAvtla~~l~g~ 96 (161)
.-|+||+||.+.++..+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999988643
No 35
>PRK09713 focB putative formate transporter; Provisional
Probab=55.61 E-value=1.1e+02 Score=24.79 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHH----HHHHHhHHHHHHHHHHHHHhcC--CCC
Q 046726 56 SLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALF----YWVSQMLASVMASLLLRVTAIG--QNI 129 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~----yi~aQ~lGa~~g~~l~~~~~~~--~~~ 129 (161)
..+..++.+..++.++++.-+..--++. . ++.....||.+|++.+- =+++.++|+++.+.+.+..-.- +..
T Consensus 66 ~~ll~g~~F~vGLilIv~~g~ELfTgN~--~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~ 142 (282)
T PRK09713 66 THLVGGLCFTLGFILLAVCGTSLFTSSV--M-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENA 142 (282)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccHHHH--H-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccch
Confidence 4566677777777777776554332221 2 22334688888887774 3456666666666665432110 011
Q ss_pred c--cc--c---cCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 130 P--AY--T---IAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 130 ~--~~--~---~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
. .. . ..-+.+.++.|+--+++.++.++.+.
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~ 179 (282)
T PRK09713 143 MWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALW 179 (282)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 01234788888888888888877664
No 36
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=50.30 E-value=1.2e+02 Score=23.71 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHHHH----HHhHHHHHHHHHHHHHhc-CCCC-
Q 046726 56 SLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFYWV----SQMLASVMASLLLRVTAI-GQNI- 129 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~-~~~~- 129 (161)
..+..++.+..++.+++..-+..-- =|-......++.||.+|++.+-.|. +.++|+++-+.+...... .+..
T Consensus 42 ~~~l~~~~F~~gl~~Iv~~g~eLfT--gn~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~ 119 (239)
T TIGR00790 42 AKLVGGATFPIGLILVVIAGSDLFT--GNTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANG 119 (239)
T ss_pred HHHHHHHHHHHHHheeeeeCccccc--cchHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcc
Confidence 4455566666666666654333211 1333333446688888887766555 455555555444433211 0111
Q ss_pred cc--c-----ccCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 130 PA--Y-----TIAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 130 ~~--~-----~~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
+. . ...-+.+.++.|+-=+.+.++..+.+.
T Consensus 120 ~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~ 156 (239)
T TIGR00790 120 PWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLAVW 156 (239)
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 011234677777777777777666553
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=49.31 E-value=3.5 Score=34.17 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=17.4
Q ss_pred HhcCCCCCCchHHHHHHHHhc
Q 046726 75 AANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 75 ~~~iSG~hlNPAvtla~~l~g 95 (161)
.+.-||||+.||++++..+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 445689999999999988863
No 38
>COG0701 Predicted permeases [General function prediction only]
Probab=45.08 E-value=46 Score=27.53 Aligned_cols=47 Identities=21% Similarity=0.280 Sum_probs=36.5
Q ss_pred CCCCCCch-HHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 78 ISGGHVNP-AVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 78 iSG~hlNP-Avtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
.+.+-+|| +++......|. +|.-...|+++-++=+++.+.+....+.
T Consensus 101 ~aaP~iNp~~i~~t~~~fg~-~~~~~~~r~v~~li~avliG~i~~~~~~ 148 (317)
T COG0701 101 VAAPLINPIAITSTYAAFGS-QWGATLIRVVAGLIIAVLIGLIVSKLFK 148 (317)
T ss_pred hcCCccCHHHHHHHHHHHcc-CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999 56666666654 8889999999988888888888777663
No 39
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=41.69 E-value=1.9e+02 Score=23.44 Aligned_cols=58 Identities=10% Similarity=-0.107 Sum_probs=38.7
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHH
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFA 153 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 153 (161)
..+|...+-+++-|-+=+-+|+.+.+..++++..............+..+.|...|.+
T Consensus 96 ~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~~~~~~~~~~~~~~l~dl~~~~~ 153 (271)
T TIGR02587 96 ETSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNNSLSEGKQNSEYGYLAELFAMLV 153 (271)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCccccchhhhcchhhhHHHHHHHHH
Confidence 3578899999999999999999999999987643211111112445555555555543
No 40
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=38.13 E-value=91 Score=21.42 Aligned_cols=47 Identities=23% Similarity=0.425 Sum_probs=38.4
Q ss_pred CCCCchHHHHHHHH-hcCC-CcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 046726 80 GGHVNPAVTFAKAV-SGHI-TVPTALFYWVSQMLASVMASLLLRVTAIG 126 (161)
Q Consensus 80 G~hlNPAvtla~~l-~g~~-~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 126 (161)
|+.+.|=..+-.-+ .|+. +..|-++|+++-++|+=.|..+.+++.++
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 57888888888755 4554 46789999999999999999999998754
No 41
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism]
Probab=35.12 E-value=3.2e+02 Score=24.18 Aligned_cols=117 Identities=14% Similarity=0.140 Sum_probs=64.6
Q ss_pred ccccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchh----H---HHHHHHHHHHHHHHHHHhcCCC
Q 046726 8 ARFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSL----V---VAAIANVFALSSTVYIAANISG 80 (161)
Q Consensus 8 ~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~l~~g~~v~~~i~~~~~iSG 80 (161)
.|...+.+...+...+.=-+...++-+++...+..+....+++-.+|.+. . ...+ ......+.....-+++.
T Consensus 264 sRfa~s~~~~~~gq~~gLPv~~~l~~ligvv~tsa~~~lyG~~~w~P~di~~~~~~~~~~~f-l~~l~~~iati~~Ni~a 342 (497)
T COG1953 264 TRFAKSQKAQIWGQLVGLPVNFALFSLIGVVVTSASYILYGETIWDPLDIVARFLSGFYAAF-LAGLTFAVATISTNIAA 342 (497)
T ss_pred hcccCChhhhhhccchhhhHHHHHHHHHHhhHHHHHHHhhCcccCCHHHHHHHhccchHHHH-HHHHHHHHHHHhhhHHh
Confidence 34444333444444454444454555554444433333434333333111 1 1112 22333445556778899
Q ss_pred CCCchHHHHHHHHhcCCCcchhHH----------------------HHH---HHhHHHHHHHHHHHHHhc
Q 046726 81 GHVNPAVTFAKAVSGHITVPTALF----------------------YWV---SQMLASVMASLLLRVTAI 125 (161)
Q Consensus 81 ~hlNPAvtla~~l~g~~~~~~~~~----------------------yi~---aQ~lGa~~g~~l~~~~~~ 125 (161)
..+-|+-+++..+-++++++|.-. +++ +-++|.+.|..++.+..-
T Consensus 343 N~vsp~~D~s~l~Pk~in~krg~liaA~ial~~~PW~l~~s~s~f~~~L~~yg~~LgpiaGVmiaDyfli 412 (497)
T COG1953 343 NIVSPGYDLSALFPKYINIKRGGLIAAIIALLICPWNLLESSSSFTTFLGSYGVFLGPIAGVMIADYFLV 412 (497)
T ss_pred ccCChHHHHHHhcccccchhhhHHHHHHHHHHHcChHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999988877777655322 333 378889999988876554
No 42
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=31.66 E-value=83 Score=21.92 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=24.2
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHh
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
++.++.+...|+..+++++++++.+-+.+.
T Consensus 88 ~~~~~~~a~~y~~~s~~~gl~a~~~G~~l~ 117 (118)
T PRK14213 88 MAKRVKESILYIALTLAGSLLAFWCGWTII 117 (118)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345788899999999999999988766543
No 43
>PRK09979 putative rho operon leader peptide; Provisional
Probab=30.22 E-value=24 Score=18.42 Aligned_cols=14 Identities=43% Similarity=0.854 Sum_probs=11.4
Q ss_pred cCCCCCCchHHHHH
Q 046726 77 NISGGHVNPAVTFA 90 (161)
Q Consensus 77 ~iSG~hlNPAvtla 90 (161)
.|||..+||.--+.
T Consensus 5 qisgsslnpscrfs 18 (33)
T PRK09979 5 QISGSSLNPSCRFS 18 (33)
T ss_pred cccCCcCCcccccc
Confidence 58999999986655
No 44
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=28.48 E-value=1.2e+02 Score=21.48 Aligned_cols=30 Identities=7% Similarity=-0.151 Sum_probs=24.7
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHh
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
++-.+.+...|+..+++++++++.+-+.+.
T Consensus 95 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l~ 124 (127)
T PRK14200 95 QQGAFFKMGLNVLLNVVLSISAAWIGFQLL 124 (127)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788899999999999999998876554
No 45
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=25.37 E-value=2.8e+02 Score=20.41 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=18.8
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHh
Q 046726 99 VPTALFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 99 ~~~~~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
+.....|..+-+.|+.+|..+.+.+.
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L~ 148 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKALK 148 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666677788888888888776653
No 46
>PF14990 DUF4516: Domain of unknown function (DUF4516)
Probab=24.93 E-value=1.6e+02 Score=17.31 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=27.8
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQN 128 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~ 128 (161)
+.+|.+-+....+-++.-++|+-.+...|.++.
T Consensus 4 Gv~~~~yl~~~~~s~~sM~aGA~vVH~~ykPdl 36 (47)
T PF14990_consen 4 GVSWPSYLKSLVASLLSMLAGASVVHNIYKPDL 36 (47)
T ss_pred CCcHHHHHHHHHHHHHHHHhhhHHHHHHhCccC
Confidence 468888888888889999999999999887754
No 47
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=24.46 E-value=1.3e+02 Score=16.32 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=17.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHh
Q 046726 103 LFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 103 ~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
|-=..+|++.+++++.++.++-
T Consensus 11 WhDLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 11 WHDLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HHHhHhHHHHHHHHHHHHHHHH
Confidence 3346789999999999887764
No 48
>PRK14207 camphor resistance protein CrcB; Provisional
Probab=24.15 E-value=1.4e+02 Score=20.95 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=23.8
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.+.+...|+..+++++++++.+-+.+
T Consensus 92 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (123)
T PRK14207 92 REREYLLALLNISANVLITISLVFLGFIL 120 (123)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467789999999999999998887654
No 49
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=23.55 E-value=1.5e+02 Score=20.66 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=23.3
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++..+.+...|+..+++++++++.+-+.+
T Consensus 87 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 115 (118)
T PRK14205 87 NRKNFSTFLLYLSATYIVGILFAFLGMKL 115 (118)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467788999999999999998876543
No 50
>PRK14223 camphor resistance protein CrcB; Provisional
Probab=22.80 E-value=1.5e+02 Score=20.69 Aligned_cols=29 Identities=14% Similarity=0.073 Sum_probs=23.7
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.|.+...|+...++++++++.+-+.+
T Consensus 89 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 117 (122)
T PRK14223 89 EEGLYIKALLNILLNVFGCLIMIYFGRVL 117 (122)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578899999999999999998876543
No 51
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=22.75 E-value=1.5e+02 Score=20.66 Aligned_cols=29 Identities=7% Similarity=-0.037 Sum_probs=23.7
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.|.+...|++.+++++++++.+-+.+
T Consensus 88 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 116 (120)
T PRK14220 88 KSKNYRVLKLYALLSYLGGLILVFCGYYL 116 (120)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467889999999999999998876554
No 52
>PRK14202 camphor resistance protein CrcB; Provisional
Probab=22.38 E-value=1.6e+02 Score=20.79 Aligned_cols=29 Identities=10% Similarity=0.029 Sum_probs=23.7
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-++.+...|+...++++++++.+-+.+
T Consensus 95 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 123 (128)
T PRK14202 95 RDGELFYASLYLAGSLVGGFVALYSGTLL 123 (128)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34468889999999999999998876544
No 53
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=21.59 E-value=1.7e+02 Score=20.56 Aligned_cols=29 Identities=7% Similarity=-0.009 Sum_probs=24.0
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.+.+...|+..+++++++++.+-+.+
T Consensus 91 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 119 (124)
T PRK14198 91 ERGALGLAALYVLGSVALGIAGLFAGLAL 119 (124)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44568899999999999999998876654
No 54
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=21.48 E-value=1.1e+02 Score=26.90 Aligned_cols=56 Identities=16% Similarity=0.065 Sum_probs=37.7
Q ss_pred CcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHH
Q 046726 98 TVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTV 158 (161)
Q Consensus 98 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~i 158 (161)
--.+.-++..++.+|.++|+++.+.++.-+.. ..-.++...|+.|-+.|+..-+++
T Consensus 168 ~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~-----~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 168 RGLRMGIWYASASLGNIFGGLIAYGVFKLNGS-----GGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-----CCcCCceeehhHHHHHHHHHHheE
Confidence 34566777778889999999998887641111 112357777888888887766544
No 55
>PRK14225 camphor resistance protein CrcB; Provisional
Probab=21.10 E-value=1.7e+02 Score=20.96 Aligned_cols=29 Identities=24% Similarity=0.211 Sum_probs=23.6
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
.+-.+.+...|++.+++++++++.+-+.+
T Consensus 103 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 131 (137)
T PRK14225 103 LHGNAAFALAYLCGLVFLSLSAAMLGLIA 131 (137)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999998876554
No 56
>PRK14201 camphor resistance protein CrcB; Provisional
Probab=21.05 E-value=1.8e+02 Score=20.28 Aligned_cols=29 Identities=17% Similarity=0.183 Sum_probs=24.0
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.+.+...|++.++.++++++.+-+.+
T Consensus 88 ~~~~~~~a~~y~~~s~~~gl~~~~~G~~l 116 (121)
T PRK14201 88 DHQQFITLLLYAVTSYIFGILLCYVGIKL 116 (121)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568899999999999999998876654
No 57
>PRK14226 camphor resistance protein CrcB; Provisional
Probab=20.97 E-value=1.8e+02 Score=20.68 Aligned_cols=30 Identities=23% Similarity=0.157 Sum_probs=24.3
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHh
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
++-.|.+...|+..+++++++++.+-+.+-
T Consensus 96 ~~~~~~~a~~y~~~s~~~gl~a~~~G~~l~ 125 (130)
T PRK14226 96 QRGEIFIAIGYIMVSVLASLIAVILGFYIV 125 (130)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345688899999999999999988766543
No 58
>PRK11375 allantoin permease; Provisional
Probab=20.88 E-value=5.6e+02 Score=22.24 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=15.3
Q ss_pred cCCCCCCchHHHHHHHHhcCCCcch
Q 046726 77 NISGGHVNPAVTFAKAVSGHITVPT 101 (161)
Q Consensus 77 ~iSG~hlNPAvtla~~l~g~~~~~~ 101 (161)
+.+..-..|+.+++..+-++++.++
T Consensus 325 N~~~N~ys~~~~l~~l~pk~i~~~~ 349 (484)
T PRK11375 325 NATGNIIPAGYQIAALAPTKLTYKN 349 (484)
T ss_pred HHHhhcccHHHHHHHhCcCccchhh
Confidence 3445667777888766655545444
No 59
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=20.53 E-value=1.8e+02 Score=20.25 Aligned_cols=29 Identities=14% Similarity=-0.042 Sum_probs=24.1
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.+.+...|+...++++++++.+-+.+
T Consensus 86 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 114 (119)
T PRK14230 86 QSNRPASALANIFLHTAGSLLLTWLGLKI 114 (119)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567889999999999999998887654
No 60
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=20.50 E-value=1.8e+02 Score=20.18 Aligned_cols=28 Identities=11% Similarity=0.066 Sum_probs=22.9
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRV 122 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~ 122 (161)
.+..|.+...|+..+++++++++.+-+.
T Consensus 88 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~ 115 (118)
T PRK14214 88 WKTNYRVLFSYLGCTYVFGLIAAFLGMM 115 (118)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788999999999999999877554
No 61
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=20.47 E-value=4.9e+02 Score=21.39 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=20.3
Q ss_pred CCcch-----hHHHHHHHhHHHHHHHHHHHHHh
Q 046726 97 ITVPT-----ALFYWVSQMLASVMASLLLRVTA 124 (161)
Q Consensus 97 ~~~~~-----~~~yi~aQ~lGa~~g~~l~~~~~ 124 (161)
.+|.+ ....+++|++|.+++..+++.+.
T Consensus 113 v~w~~~~~~I~~~wv~sPlia~~~a~~l~~~~~ 145 (326)
T PF01384_consen 113 VNWSKGLLKIVLSWVISPLIAFILAYILYRLIR 145 (326)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56654 33466799999999998877654
No 62
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=20.25 E-value=1.8e+02 Score=20.33 Aligned_cols=29 Identities=17% Similarity=0.016 Sum_probs=23.9
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHH
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVT 123 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~ 123 (161)
++-.|.+...|+...++++++++.+-+.+
T Consensus 92 ~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (125)
T PRK14195 92 ERGAYGAAAAYIAASVVLSVAALFAGLAI 120 (125)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578889999999999999998876654
Done!