Query 046726
Match_columns 161
No_of_seqs 160 out of 1156
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 06:15:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 4.3E-34 1.5E-38 221.5 16.0 142 16-160 1-145 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 2.6E-34 9E-39 233.1 14.9 149 10-161 43-194 (340)
3 2zz9_A Aquaporin-4; water tran 100.0 8.7E-34 3E-38 227.8 17.2 149 9-160 3-154 (301)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 1.5E-33 5.2E-38 224.6 18.0 148 13-160 39-188 (279)
5 3cn5_A Aquaporin; membrane pro 100.0 2.2E-33 7.5E-38 225.8 17.8 150 10-161 52-205 (304)
6 1j4n_A Aquaporin 1; membrane p 100.0 1.7E-33 5.8E-38 223.7 16.3 150 11-160 3-157 (271)
7 2f2b_A Aquaporin AQPM; protein 100.0 1.3E-32 4.3E-37 216.1 16.8 144 17-160 3-163 (246)
8 3llq_A Aquaporin Z 2; aquapori 100.0 2.1E-32 7.2E-37 215.4 17.5 144 13-160 24-177 (256)
9 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 9.2E-33 3.1E-37 218.9 15.5 143 11-160 4-149 (266)
10 2b6o_A Aquaporin-0, lens fiber 100.0 6.1E-32 2.1E-36 214.0 18.3 143 11-160 2-147 (263)
11 2o9g_A Aquaporin Z; integral m 100.0 9.5E-32 3.2E-36 209.7 17.6 139 18-160 4-154 (234)
12 1ldf_A Glycerol uptake facilit 100.0 8.1E-32 2.8E-36 215.1 15.4 142 14-160 3-165 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 2.7E-31 9.3E-36 209.8 14.3 141 15-160 6-154 (258)
14 2f2b_A Aquaporin AQPM; protein 99.8 3.2E-19 1.1E-23 139.8 11.3 106 10-125 135-245 (246)
15 2o9g_A Aquaporin Z; integral m 99.7 1.1E-16 3.7E-21 124.5 10.0 102 15-127 131-233 (234)
16 2b6o_A Aquaporin-0, lens fiber 99.7 2.8E-16 9.5E-21 124.2 12.1 103 15-127 124-226 (263)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.7 4.8E-16 1.6E-20 122.9 11.8 104 14-127 125-229 (266)
18 2w2e_A AQY1, aquaporin, aquapo 99.7 6.2E-16 2.1E-20 123.0 11.8 103 15-127 165-267 (279)
19 3llq_A Aquaporin Z 2; aquapori 99.7 2E-16 6.7E-21 124.4 8.5 100 15-125 154-254 (256)
20 3gd8_A Aquaporin-4; proton exc 99.7 6.5E-16 2.2E-20 119.4 11.0 101 15-125 122-222 (223)
21 3cn5_A Aquaporin; membrane pro 99.6 2.7E-16 9.2E-21 126.4 8.1 108 15-127 181-290 (304)
22 3iyz_A Aquaporin-4; water tran 99.6 1.5E-15 5E-20 123.3 10.9 103 15-127 170-272 (340)
23 2zz9_A Aquaporin-4; water tran 99.6 1.2E-15 4E-20 122.5 10.2 103 14-126 130-232 (301)
24 1j4n_A Aquaporin 1; membrane p 99.6 8.4E-16 2.9E-20 121.9 9.2 101 17-127 136-236 (271)
25 1ldf_A Glycerol uptake facilit 99.6 1.1E-15 3.9E-20 121.7 9.9 105 15-127 142-258 (281)
26 3c02_A Aquaglyceroporin; membr 99.6 6.1E-15 2.1E-19 116.2 8.6 103 17-126 133-244 (258)
27 3kcu_A Probable formate transp 81.8 17 0.00057 28.4 12.1 101 56-159 67-180 (285)
28 3kly_A Putative formate transp 71.5 33 0.0011 26.6 10.4 100 56-159 66-179 (280)
29 3s2u_A UDP-N-acetylglucosamine 58.8 1.8 6E-05 34.5 -0.3 20 77-96 10-29 (365)
30 3tds_E Formate/nitrite transpo 51.6 80 0.0027 24.2 10.4 103 55-159 62-175 (268)
31 4fc4_A Nitrite transporter NIR 33.2 1.6E+02 0.0055 22.4 14.3 97 56-158 57-168 (261)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=221.52 Aligned_cols=142 Identities=24% Similarity=0.420 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc
Q 046726 16 KEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG 95 (161)
Q Consensus 16 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g 95 (161)
+++||++++||+||++|++.+++++... .++++.++.+++.+++++|+++++.+++++++||+|+|||||++.++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~---~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINW---GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCT---TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 4679999999999999999999988532 1222233457899999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC---CcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 96 HITVPTALFYWVSQMLASVMASLLLRVTAIGQN---IPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 96 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++|++.+.|+++|++|+++|+.+.+.+++++. ...+.+.++.+..++++.|+++||+|++++++
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~ 145 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA 145 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887532 23455667789999999999999999999985
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-34 Score=233.07 Aligned_cols=149 Identities=26% Similarity=0.428 Sum_probs=128.6
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
.++.+.+++||++++||+||++|+|++++++... .+++...+.+++.+++++|+++++.+|+++++||+|+|||||+
T Consensus 43 ~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~---~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTl 119 (340)
T 3iyz_A 43 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINW---GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTV 119 (340)
T ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHH
Confidence 3455667889999999999999999999998643 1222233457889999999999999999999999999999999
Q ss_pred HHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC---cccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Q 046726 90 AKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNI---PAYTIAQEMTGFGASLLEGVLTFALVYTVYAA 161 (161)
Q Consensus 90 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~ 161 (161)
++++.|+++|.+.+.|+++|++|+++|+.+++.+++++.. ..+.+.++.+..++|+.|+++||+|+++|+++
T Consensus 120 al~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~ 194 (340)
T 3iyz_A 120 AMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS 194 (340)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999876532 33455677899999999999999999999863
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=8.7e-34 Score=227.76 Aligned_cols=149 Identities=26% Similarity=0.421 Sum_probs=126.0
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHH
Q 046726 9 RFNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVT 88 (161)
Q Consensus 9 ~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvt 88 (161)
+.++..+++++|++++||+||++|++++++++.... ..+...+.+++.+++++|+++++.+|+++++||+|+|||||
T Consensus 3 ~~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~---~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVT 79 (301)
T 2zz9_A 3 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVT 79 (301)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTT---CC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHH
Confidence 456778899999999999999999999999885432 11122335788899999999999999999999999999999
Q ss_pred HHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC---cccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 89 FAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNI---PAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 89 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++++.|+++|++.+.|+++|++|+++|+.+.+.+++++.. ..+.+.++.+..++++.|+++||+|+++|++
T Consensus 80 la~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~ 154 (301)
T 2zz9_A 80 VAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFA 154 (301)
T ss_dssp HHHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999876432 2345566789999999999999999999986
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.5e-33 Score=224.63 Aligned_cols=148 Identities=23% Similarity=0.323 Sum_probs=124.2
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhhhhccc-c-CCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 13 SVTKEALRSYLAEFISTFFYVFAVVGSAMASKK-L-SPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 13 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
...++.+|++++||+||++|++++++++...+. . .++...+..+++.+++++|+++++.+|+++++||+|+|||||++
T Consensus 39 ~~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla 118 (279)
T 2w2e_A 39 DSVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLA 118 (279)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHH
Confidence 334578999999999999999999987432211 1 11112223468889999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCCcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQNIPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.++.|+++|++.+.|+++|++|+++|+.+.+.+++++....+.+.++.+..++++.|+++||+|+++|++
T Consensus 119 ~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~ 188 (279)
T 2w2e_A 119 LVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLM 188 (279)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876543344556789999999999999999999985
No 5
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=2.2e-33 Score=225.84 Aligned_cols=150 Identities=29% Similarity=0.360 Sum_probs=126.2
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
.+|..+++++|++++||+||++|+|++++++....... +.....+++.+++++|+++++.+|+++++||+|+|||||+
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~--~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 129 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKET--VVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTF 129 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--STTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEecccc--CCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHH
Confidence 46667788999999999999999999999886433221 1123357889999999999999999999999999999999
Q ss_pred HHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC----CcccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Q 046726 90 AKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN----IPAYTIAQEMTGFGASLLEGVLTFALVYTVYAA 161 (161)
Q Consensus 90 a~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~ 161 (161)
+.++.|+++|++.+.|+++|++|+++|+.+.+.+++++. .+...+.++.+..++++.|+++||+|+++|+++
T Consensus 130 a~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~ 205 (304)
T 3cn5_A 130 GLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSA 205 (304)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999999999999999887531 122334567899999999999999999999853
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.7e-33 Score=223.73 Aligned_cols=150 Identities=24% Similarity=0.322 Sum_probs=126.8
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccc--CCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHH
Q 046726 11 NQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKL--SPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVT 88 (161)
Q Consensus 11 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvt 88 (161)
+|..+++++|++++||+||++|++++++++...... .+++.....+.+.+++++|+++++.+|+++++||+|+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 456678899999999999999999999988643211 112222224688899999999999999999999999999999
Q ss_pred HHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC---CcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 89 FAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN---IPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 89 la~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
++.++.|+++|++.+.|+++|++|+++|+.+.+.++++.. ...+.+.++.+..++++.|+++|++|+++|++
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~ 157 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLA 157 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999986532 23345567788899999999999999999985
No 7
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.3e-32 Score=216.14 Aligned_cols=144 Identities=27% Similarity=0.314 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCc-------cC-----CCchhHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 046726 17 EALRSYLAEFISTFFYVFAVVGSAMASKKLSPDA-------AS-----NTSSLVVAAIANVFALSSTVYIAANISGGHVN 84 (161)
Q Consensus 17 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlN 84 (161)
+++|++++||+||++|++.+++++....+..+++ .. +..+++.+++++|+++++.+|+++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4689999999999999999998876543121110 01 22456779999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC---Cccc--ccCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 85 PAVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN---IPAY--TIAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 85 PAvtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~--~~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
||||++.++.|+++|++.+.|+++|++|+++|+.+.+.+++++. .... .+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999998731 2222 333578999999999999999999998
Q ss_pred c
Q 046726 160 A 160 (161)
Q Consensus 160 ~ 160 (161)
+
T Consensus 163 ~ 163 (246)
T 2f2b_A 163 G 163 (246)
T ss_dssp H
T ss_pred E
Confidence 5
No 8
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.1e-32 Score=215.43 Aligned_cols=144 Identities=27% Similarity=0.344 Sum_probs=118.7
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHH
Q 046726 13 SVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKA 92 (161)
Q Consensus 13 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~ 92 (161)
..+++++|++++||+||++|++++++++...... +....+++.+++++|+++++.+|+++++||+|+|||||++.+
T Consensus 24 ~~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~----~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~ 99 (256)
T 3llq_A 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAF----PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLT 99 (256)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHH
Confidence 3456789999999999999999999987543211 122357899999999999999999999999999999999999
Q ss_pred HhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC-C--------ccccc-CCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 93 VSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN-I--------PAYTI-AQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 93 l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-~--------~~~~~-~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+.|+++|++.+.|+++|++|+++|+.+.+.+++++. . ....+ +.+.+..++++.|+++||+|++++++
T Consensus 100 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~ 177 (256)
T 3llq_A 100 VAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG 177 (256)
T ss_dssp HTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999885421 0 11122 23568999999999999999999985
No 9
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.2e-33 Score=218.88 Aligned_cols=143 Identities=27% Similarity=0.414 Sum_probs=125.0
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 11 NQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 11 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
+|..+++++|++++||+||++|++++++++.... + ...+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~----~---~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla 76 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP----S---ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLA 76 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS----S---SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C---CCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHH
Confidence 4667889999999999999999999999884211 1 12468889999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC---CcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN---IPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
.++.|+++|++.+.|+++|++|+++|+.+.+.+++++. .+.+.+.++.+..++++.|+++||+|+++|++
T Consensus 77 ~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~ 149 (266)
T 3d9s_A 77 LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFA 149 (266)
T ss_dssp HHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986532 23344556789999999999999999999986
No 10
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.1e-32 Score=213.98 Aligned_cols=143 Identities=29% Similarity=0.405 Sum_probs=124.4
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 046726 11 NQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFA 90 (161)
Q Consensus 11 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla 90 (161)
+|..+++++|++++||+||++|++++++++... + ..+.+++.+++++|+++++.++.++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~----~---~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW----A---PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC----C---SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC----C---CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 456778899999999999999999999988421 1 122477889999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC---CcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 91 KAVSGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN---IPAYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 91 ~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+++.|+++|.+.+.|+++|++|+++|+.+.+.+++++. .+.+.+.++.+..++++.|+++||+|++++++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~ 147 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFA 147 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997643 23455667789999999999999999999985
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=9.5e-32 Score=209.71 Aligned_cols=139 Identities=24% Similarity=0.309 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCC
Q 046726 18 ALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHI 97 (161)
Q Consensus 18 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~ 97 (161)
++|++++||+||++|++.+++++...+. .+.+..+++.+++++|+++++.+|+++++||+|+|||||++.++.|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~----~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 79 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAG----FPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRF 79 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTT----CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccC----CCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCC
Confidence 6899999999999999999998744321 111234788999999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC-----------cccc-cCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 98 TVPTALFYWVSQMLASVMASLLLRVTAIGQNI-----------PAYT-IAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 98 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
+|++.+.|+++|++|+++|+.+.+.++++... .... .+.+.+..++++.|+++|++|++++++
T Consensus 80 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~ 154 (234)
T 2o9g_A 80 PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG 154 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875320 1112 223578999999999999999999985
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.98 E-value=8.1e-32 Score=215.15 Aligned_cols=142 Identities=23% Similarity=0.236 Sum_probs=117.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q 046726 14 VTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAV 93 (161)
Q Consensus 14 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l 93 (161)
++++++|++++||+||++|++++++++.... .. +. ..+.+.+++++|+++++.+|+++++||+|+|||||++.++
T Consensus 3 ~~~~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~-~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALK-VA-GA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWL 77 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HS-CC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc-CC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHH
Confidence 3556899999999999999999998875432 11 11 1244558999999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCC-------------------Ccccc--cCCCCchHHHHHHHHHHHH
Q 046726 94 SGHITVPTALFYWVSQMLASVMASLLLRVTAIGQN-------------------IPAYT--IAQEMTGFGASLLEGVLTF 152 (161)
Q Consensus 94 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-------------------~~~~~--~~~~~~~~~~~~~E~~~T~ 152 (161)
.|+++|++.+.|+++|++|+++|+.+.+.+++++. ...+. +.++.+..++++.|+++||
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf 157 (281)
T 1ldf_A 78 FACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITA 157 (281)
T ss_dssp HSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999886521 01122 3445789999999999999
Q ss_pred HHHHHHHc
Q 046726 153 ALVYTVYA 160 (161)
Q Consensus 153 ~L~~~il~ 160 (161)
+|+++|++
T Consensus 158 ~Lv~~il~ 165 (281)
T 1ldf_A 158 ILMGLILA 165 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.97 E-value=2.7e-31 Score=209.81 Aligned_cols=141 Identities=19% Similarity=0.259 Sum_probs=116.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
.++++|++++||+||+++++++++++..... ++. ..+++.+++++|+++++.+|+++++||+|+|||||++.++.
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~--~~~---~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 80 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFHT--TGL---SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSI 80 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSS---TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCC---CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHh
Confidence 4578999999999999999999988754321 111 24788899999999999999999999999999999999999
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCCC----c----ccccCCCCchHHHHHHHHHHHHHHHHHHHc
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQNI----P----AYTIAQEMTGFGASLLEGVLTFALVYTVYA 160 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~----~----~~~~~~~~~~~~~~~~E~~~T~~L~~~il~ 160 (161)
|+++|++.+.|+++|++|+++|+.+.+.+++++.. + ........+..++++.|+++||+|+++|++
T Consensus 81 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~ 154 (258)
T 3c02_A 81 NKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILV 154 (258)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875311 1 111223345677999999999999999986
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.80 E-value=3.2e-19 Score=139.79 Aligned_cols=106 Identities=22% Similarity=0.288 Sum_probs=87.5
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHH
Q 046726 10 FNQSVTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTF 89 (161)
Q Consensus 10 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtl 89 (161)
..+....+.++.++.|+++|++|++.+++.....+ .. ....++.+|+.+...++..+++||+|+|||||+
T Consensus 135 t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~----~~------~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~l 204 (246)
T 2f2b_A 135 TAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER----AP------KGFAGIIIGLTVAGIITTLGNISGSSLNPARTF 204 (246)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTT----SC------TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred ccCccccchHHHHHHHHHHHHHHHheeeEEecCCC----CC------CceeeHHHHHHHHHHHhcccccCCCccCHHHHH
Confidence 33334567799999999999999999987653211 00 113589999999999999999999999999999
Q ss_pred HHHH-----hcCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 90 AKAV-----SGHITVPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 90 a~~l-----~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
++.+ .++..|.+.|+||++|++|+++|+++++.+.+
T Consensus 205 gp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 205 GPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 9888 34678999999999999999999999988764
No 15
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.69 E-value=1.1e-16 Score=124.54 Aligned_cols=102 Identities=20% Similarity=0.314 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+.++.++.|+++|++|++.+++..+.+ .. .. ..++.+|+.+...++..++.||+.+||||++++.+.
T Consensus 131 ~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~-----~~----~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~ 199 (234)
T 2o9g_A 131 GYSMLSALVVELVLSAGFLLVIHGATDKF-----AP----AG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIF 199 (234)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTSTT-----SC----TT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcCCC-----Cc----cc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHH
Confidence 45678999999999999999998765311 00 01 358899999999999999999999999999998885
Q ss_pred -cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 -GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 -g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
+...|.+.|+||++|++|+++|+++++.+..++
T Consensus 200 ~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 200 QGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp HCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred hCCCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 444577999999999999999999999887654
No 16
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.68 E-value=2.8e-16 Score=124.15 Aligned_cols=103 Identities=19% Similarity=0.314 Sum_probs=85.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+..+.++.|+++|++|++.+++..+..+. . . .+ ..++.+|+.+.+.+...++.||+.+||||++++.+.
T Consensus 124 ~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~---~--~--~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 194 (263)
T 2b6o_A 124 GVSVGQATIVEIFLTLQFVLCIFATYDERRN---G--R--LG--SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194 (263)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHSCTTSC---S--S--CC--CHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhcccCC---C--C--cc--cHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHH
Confidence 3456899999999999999999876532110 0 0 01 248889999999999999999999999999999997
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
.. .|.+.|+||++|++|+++|+++++.+..++
T Consensus 195 ~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 195 TR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cC-CccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 55 889999999999999999999999887654
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.67 E-value=4.8e-16 Score=122.94 Aligned_cols=104 Identities=17% Similarity=0.303 Sum_probs=86.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q 046726 14 VTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAV 93 (161)
Q Consensus 14 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l 93 (161)
...+..+.++.|+++|++|++.+++..+..+. . . .. ..++.+|+.+.+.+...++.||+.+||||++++.+
T Consensus 125 ~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~----~-~--~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal 195 (266)
T 3d9s_A 125 NNTTQGQAMVVELILTFQLALCIFASTDSRRT----S-P--VG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAV 195 (266)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCC----S-C--CC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhcccCC----C-c--cc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHH
Confidence 34467899999999999999999987632211 0 0 01 25888999999999999999999999999999999
Q ss_pred hcCCCcch-hHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 94 SGHITVPT-ALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 94 ~g~~~~~~-~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
... .|.+ .|+||++|++|+++|+++++.+..++
T Consensus 196 ~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 196 VMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 655 7888 99999999999999999999987654
No 18
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.66 E-value=6.2e-16 Score=123.04 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=85.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+..+.++.|+++|++|++.+++.....+ . ..-..++.+|+.+.+.++..++.||+.+||||++++.+.
T Consensus 165 ~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~----~------~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~ 234 (279)
T 2w2e_A 165 GASRTRGLFLEAFGTAILCLTVLMLAVEKH----R------ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVA 234 (279)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSCS----T------TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHccCCC----C------CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHH
Confidence 456789999999999999999987653211 0 112458899999999999999999999999999999997
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
...-+.+.|+||++|++|+++|+++++.+...+
T Consensus 235 ~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~ 267 (279)
T 2w2e_A 235 ARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLN 267 (279)
T ss_dssp HTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 654456799999999999999999999887554
No 19
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=2e-16 Score=124.41 Aligned_cols=100 Identities=20% Similarity=0.341 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+..+.++.|+++|++|++.+++..+..+ . .-..++.+|+.+....++.++.||+.+||||++++.+.
T Consensus 154 ~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~-----~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~ 222 (256)
T 3llq_A 154 GYSLVSALLIEIILTAFFLIVILGSTHGRV-----P------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALF 222 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTS-----C------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcCCCC-----C------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHH
Confidence 346789999999999999999887653211 0 01348899999999999999999999999999999885
Q ss_pred -cCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 95 -GHITVPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 95 -g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
|...|.+.|+||++|++|+++|+++++++.+
T Consensus 223 ~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~ 254 (256)
T 3llq_A 223 VGGWALQQLWLFWLAPIVGGAAGAVIWKLFGE 254 (256)
T ss_dssp HCHHHHHHTTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCCCcccceeeeeeHHHHHHHHHHHHHHHhcc
Confidence 4445678999999999999999999998753
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.66 E-value=6.5e-16 Score=119.38 Aligned_cols=101 Identities=27% Similarity=0.362 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
+.+..+.++.|+++|++|++.++...+..+. . .. + ..++.+|+.+.+.+...++.||+.+||||++++.+.
T Consensus 122 ~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~----~-~~--~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~ 192 (223)
T 3gd8_A 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRT----D-VT--G--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 192 (223)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHTCTTCS----C-CC--S--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHhccccC----C-cc--C--CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 4467899999999999999999876632210 0 00 1 237888888877777777899999999999999997
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAI 125 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 125 (161)
.. .|.+.|+||++|++|+++|+++++.++.
T Consensus 193 ~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 193 MG-NWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HT-CCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hc-CCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 54 7999999999999999999999988763
No 21
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.65 E-value=2.7e-16 Score=126.39 Aligned_cols=108 Identities=20% Similarity=0.294 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+.++.++.|+++|++|++.++...+..+ ...++ ......++.+|+.+.+.+++.++.||+.+||||++++.+.
T Consensus 181 ~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~-~~~~~----~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~ 255 (304)
T 3cn5_A 181 GYNKGTALGAEIIGTFVLVYTVFSATDPKR-SARDS----HVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 255 (304)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTEEEEE-ESTTS----CCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhheecCcc-CCCCc----ccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHH
Confidence 456789999999999999999996553221 11111 0011238899999999999999999999999999999986
Q ss_pred --cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 --GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 --g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
+...|.+.|+||++|++|+++|+++++.+..++
T Consensus 256 ~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 256 FNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp HCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 234789999999999999999999999887654
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.63 E-value=1.5e-15 Score=123.29 Aligned_cols=103 Identities=26% Similarity=0.345 Sum_probs=83.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+..+.++.|+++||+|++.+++..+..+ .. ..-..++.+|+.+.+.+...++.||+.+|||++|++.+.
T Consensus 170 ~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~-----~~----~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~ 240 (340)
T 3iyz_A 170 NLTAGHGLLVELIITFQLVFTIFASCDDKR-----TD----VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 240 (340)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhhcCcc-----CC----cccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 456789999999999999999987763221 00 001247889999887777777999999999999999997
Q ss_pred cCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 GHITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
.. .|.+.|+||++|++|+++|++++++++.++
T Consensus 241 ~~-~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 241 MG-NWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred cc-CCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 54 689999999999999999999999887653
No 23
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.63 E-value=1.2e-15 Score=122.49 Aligned_cols=103 Identities=26% Similarity=0.350 Sum_probs=83.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q 046726 14 VTKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAV 93 (161)
Q Consensus 14 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l 93 (161)
...+..+.++.|+++|++|++.+++..+..+ .... + ..++.+|+.+.+.+...++.||+.+||||++++.+
T Consensus 130 ~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~-----~~~~--~--~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal 200 (301)
T 2zz9_A 130 GNLTAGHGLLVELIITFQLVFTIFASCDDKR-----TDVT--G--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAV 200 (301)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHSCSSS-----SCCS--S--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCCCC-----CCcc--c--hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHH
Confidence 3456789999999999999999987653211 0000 1 24788999998888888899999999999999999
Q ss_pred hcCCCcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 046726 94 SGHITVPTALFYWVSQMLASVMASLLLRVTAIG 126 (161)
Q Consensus 94 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 126 (161)
... .|.+.|+||++|++|+++|++++++++.+
T Consensus 201 ~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 201 IMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp HHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HhC-CCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 754 79999999999999999999999988654
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.63 E-value=8.4e-16 Score=121.89 Aligned_cols=101 Identities=20% Similarity=0.332 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcC
Q 046726 17 EALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGH 96 (161)
Q Consensus 17 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~ 96 (161)
+..+.++.|+++|++|++.+++..+..+. +. .-..++.+|+.+.+.+...++.||+.+||||++++.+...
T Consensus 136 ~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~---~~------~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~ 206 (271)
T 1j4n_A 136 NSGQGLGIEIIGTLQLVLCVLATTDRRRR---DL------GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH 206 (271)
T ss_dssp CTTGGGHHHHHHHHHHHHHHHHHTCSSCC---CC------CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHhhccccCC---Cc------cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC
Confidence 45778999999999999999876532110 00 0134788999998777777889999999999999998754
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 97 ITVPTALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 97 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
.|.+.|+||++|++|+++|+++++.+..++
T Consensus 207 -~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 207 -NFQDHWIFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp -CCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred -CCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 788999999999999999999999887654
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.63 E-value=1.1e-15 Score=121.73 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=84.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q 046726 15 TKEALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVS 94 (161)
Q Consensus 15 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~ 94 (161)
..+.++.++.|+++|++|++.+++..+..+. . ...-..++.+|+.+...++..++.||+.+||||++++.+.
T Consensus 142 ~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~----~----~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 213 (281)
T 1ldf_A 142 HINFVQAFAVEMVITAILMGLILALTDDGNG----V----PRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVF 213 (281)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHCTTSS----S----CCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhccCCC----C----cccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHH
Confidence 3467899999999999999999987632210 0 0112358999999999999999999999999999998875
Q ss_pred c------CCCcc------hhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 046726 95 G------HITVP------TALFYWVSQMLASVMASLLLRVTAIGQ 127 (161)
Q Consensus 95 g------~~~~~------~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 127 (161)
. +..|. +.|+||++|++|+++|+++++.+..++
T Consensus 214 ~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 214 AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 3 22232 699999999999999999999987643
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.57 E-value=6.1e-15 Score=116.19 Aligned_cols=103 Identities=10% Similarity=-0.009 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCccCCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhc-
Q 046726 17 EALRSYLAEFISTFFYVFAVVGSAMASKKLSPDAASNTSSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSG- 95 (161)
Q Consensus 17 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g- 95 (161)
...+.++.|+++|++|++.+++..+..+.. ....+..++.+|+.+...++..++.||+.+||||++++.+..
T Consensus 133 p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~-------~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~ 205 (258)
T 3c02_A 133 SLTGAFFNELILTGILLLVILVVVDENICG-------KFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSL 205 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCcccCC-------cccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHh
Confidence 345699999999999999999876432110 012222389999999999999999999999999999988853
Q ss_pred ----CCCc----chhHHHHHHHhHHHHHHHHHHHHHhcC
Q 046726 96 ----HITV----PTALFYWVSQMLASVMASLLLRVTAIG 126 (161)
Q Consensus 96 ----~~~~----~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 126 (161)
...| .+.|+||++|++|+++|+++++.+..+
T Consensus 206 ~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~ 244 (258)
T 3c02_A 206 IAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICP 244 (258)
T ss_dssp HHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcc
Confidence 3345 458999999999999999999887654
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=81.81 E-value=17 Score=28.39 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHHH----HHHhHHHHHHHHHHHHHhcCCC-Cc
Q 046726 56 SLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFYW----VSQMLASVMASLLLRVTAIGQN-IP 130 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~yi----~aQ~lGa~~g~~l~~~~~~~~~-~~ 130 (161)
..+..++.+++++.+++..-+..--+ |--.+ ...+.||.+|++.+--| ++.++|+++-+.+.+....... .+
T Consensus 67 ~~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T 3kcu_A 67 AKLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_dssp HHHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCch
Confidence 35667888888888888876665433 32223 33457888987655444 4666666666655443211100 11
Q ss_pred ---cc-----ccCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 131 ---AY-----TIAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 131 ---~~-----~~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
.. .-.-..+..+.|+-=+.+.++.++.+.
T Consensus 144 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw 180 (285)
T 3kcu_A 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVW 180 (285)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 011234778888888888888777653
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=71.50 E-value=33 Score=26.56 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCC-CCCCchHHHHHHHHhcCCCcchhHHHHH----HHhHHHHHHHHHHHHHhcCC-CC
Q 046726 56 SLVVAAIANVFALSSTVYIAANIS-GGHVNPAVTFAKAVSGHITVPTALFYWV----SQMLASVMASLLLRVTAIGQ-NI 129 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iS-G~hlNPAvtla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~~~-~~ 129 (161)
..+..++.+++++.+++..-+..- |-.+ .++ ..+.||.+|++.+--|. +.++|+++-+.+.+...... ..
T Consensus 66 ~~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~ 141 (280)
T 3kly_A 66 TKLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDG 141 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCc
Confidence 356678888888888888766643 4333 222 24578889887666555 55555555554443211111 01
Q ss_pred c---cc-----ccCCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 130 P---AY-----TIAQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 130 ~---~~-----~~~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
+ .. .-.-..+..+.|+-=+.+.++.++.+.
T Consensus 142 ~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw 179 (280)
T 3kly_A 142 GQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVW 179 (280)
T ss_dssp THHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 00 111234678888888888888777653
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=58.84 E-value=1.8 Score=34.49 Aligned_cols=20 Identities=35% Similarity=0.584 Sum_probs=16.4
Q ss_pred cCCCCCCchHHHHHHHHhcC
Q 046726 77 NISGGHVNPAVTFAKAVSGH 96 (161)
Q Consensus 77 ~iSG~hlNPAvtla~~l~g~ 96 (161)
.-||||++||.+++..+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 34889999999999888543
No 30
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=51.58 E-value=80 Score=24.24 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=55.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhcCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--CCC-Ccc
Q 046726 55 SSLVVAAIANVFALSSTVYIAANISGGHVNPAVTFAKAVSGHITVPTALFYWVSQMLASVMASLLLRVTAI--GQN-IPA 131 (161)
Q Consensus 55 ~~~~~~~l~~g~~v~~~i~~~~~iSG~hlNPAvtla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~--~~~-~~~ 131 (161)
...+..++.+++++.+++..-+..--+ |-.......+.||.+|++.+--|.-=.+|=++|+++.-++.. +.. .+.
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 456667777777777777654332111 323222456788999987766555444444444444333221 111 110
Q ss_pred c-----cc---CCCCchHHHHHHHHHHHHHHHHHHH
Q 046726 132 Y-----TI---AQEMTGFGASLLEGVLTFALVYTVY 159 (161)
Q Consensus 132 ~-----~~---~~~~~~~~~~~~E~~~T~~L~~~il 159 (161)
. .. .-..+..+.|+-=+.+.++.++.+.
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw 175 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVL 175 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0134677888777777777776653
No 31
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=33.16 E-value=1.6e+02 Score=22.39 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCC---chHHHHHHHHhcCCCcchhHHHHH----HHhHHHHHHHHHHHHHhcCC-
Q 046726 56 SLVVAAIANVFALSSTVYIAANISGGHV---NPAVTFAKAVSGHITVPTALFYWV----SQMLASVMASLLLRVTAIGQ- 127 (161)
Q Consensus 56 ~~~~~~l~~g~~v~~~i~~~~~iSG~hl---NPAvtla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~~~- 127 (161)
+.+..++.+++++.+++.. |+.+ |-.......+.||.+|++.+--|. +.++|+++-+.+.... +..
T Consensus 57 ~~ll~g~~F~vGl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~-g~~~ 130 (261)
T 4fc4_A 57 RPLVMGATFGIALTLVIIA-----GSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWG-GGSL 130 (261)
T ss_dssp HHHHHHHHTTHHHHHHHHT-----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCTT
T ss_pred HHHHHHHHHHHHHHHHHHc-----CCcccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccc
Confidence 4566677777777776664 3444 333222355678899887766654 5555555555554441 111
Q ss_pred --CCccc--ccC---CCCchHHHHHHHHHHHHHHHHHH
Q 046726 128 --NIPAY--TIA---QEMTGFGASLLEGVLTFALVYTV 158 (161)
Q Consensus 128 --~~~~~--~~~---~~~~~~~~~~~E~~~T~~L~~~i 158 (161)
..... ... -..+..+.|+-=+.+.++.++.+
T Consensus 131 ~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaV 168 (261)
T 4fc4_A 131 LPVDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAI 168 (261)
T ss_dssp SSCTTSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 00000 011 11256777777777777766655
Done!