BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046727
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BZE9|ASPC1_HUMAN Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1
PE=1 SV=1
Length = 553
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPF 68
+ K REA+ + ++ K +RV FPD + L+ F PSET+ L DF++ L P+L F
Sbjct: 372 VTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSF 431
Query: 69 YLYTTPPKKIIKDVSQDFFSASFIPGAIVYFSYDLPKGDDVVAANSGPFLH------EDV 122
YL+ TPPK ++ D +Q F A+ P A+V+ + P G V G H DV
Sbjct: 432 YLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAG---VYLEPGLLEHAISPSAADV 488
Query: 123 MSLKGLEVIAEQPDPVQSAPEPATVIRPPVTQ------DPKPAEKKSVK------PKWLK 170
+ + + A P P+ AP+PA P + +P P + VK PKWLK
Sbjct: 489 LVARYMSRAAGSPSPL-PAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLK 547
Query: 171 M 171
+
Sbjct: 548 L 548
>sp|Q8VBT9|ASPC1_MOUSE Tether containing UBX domain for GLUT4 OS=Mus musculus GN=Aspscr1
PE=1 SV=1
Length = 550
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 23/182 (12%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPF 68
+ K REA+ + ++ K +RV FPD + L+ F PSET+ L DF++ L P+L F
Sbjct: 368 VTKAFREAQMKEKLERYPKVALRVLFPDRYILQGFFRPSETVGDLRDFVRSHLGNPELSF 427
Query: 69 YLYTTPPKKIIKDVSQDFFSASFIPGAIVYFSYDLPKGDDVVAANSGPFLH------EDV 122
YL+ PPK ++ D + F A+ P A+V+F + P G + G H DV
Sbjct: 428 YLFIAPPKMVLDDHTLTLFQANLFPAALVHFGAEEPTG---LYLEPGLLEHTVSPSTADV 484
Query: 123 MSLKGLEVIAEQPDPVQSAPEPATVIRPPVTQD-----PKPAE------KKSVK--PKWL 169
+ + + + P P+ AP+P ++ P+ +D P+P + K+S+ PKWL
Sbjct: 485 LVARCMSRASGSP-PLLPAPDPVSLESEPIAEDGALGPPEPIQGTAQPVKRSLGKVPKWL 543
Query: 170 KM 171
K+
Sbjct: 544 KL 545
>sp|Q99PL6|UBXN6_MOUSE UBX domain-containing protein 6 OS=Mus musculus GN=Ubxn6 PE=1 SV=1
Length = 442
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 11 KKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPFYL 70
K +RE EE K+T A++RVR PD L+ F+ E + +L F++ L LPF L
Sbjct: 320 KAMREKEEQRELRKYTYALVRVRLPDGCLLQGTFYAREKLSALFRFVREALQNDWLPFEL 379
Query: 71 YTTPPKKIIKDVSQDFFSASFIPGAIVYFSYDLPKGDDVVAANSGP 116
+ +K+ ++ + +P A++ FS+D +D+ AA + P
Sbjct: 380 RASGGQKLEENEALALNECGLVPSALLTFSWDASVLEDIRAAGAEP 425
>sp|Q9BZV1|UBXN6_HUMAN UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1
Length = 441
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 11 KKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPFYL 70
K +RE EE K+ ++RVR PD L+ F+ E + ++ F++ L LPF L
Sbjct: 320 KAMREKEEQRGLRKYNYTLLRVRLPDGCLLQGTFYARERLGAVYGFVREALQSDWLPFEL 379
Query: 71 YTTPPKKIIKDVSQDFFSASFIPGAIVYFSYDLPKGDDVVAANSGP 116
+ +K+ +D + +P A++ FS+D+ +D+ AA + P
Sbjct: 380 LASGGQKLSEDENLALNECGLVPSALLTFSWDMAVLEDIKAAGAEP 425
>sp|Q2KIJ6|UBXN6_BOVIN UBX domain-containing protein 6 OS=Bos taurus GN=UBXN6 PE=2 SV=1
Length = 441
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 24 KFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPFYLYTTPPKKIIKDVS 83
K+T ++RVR PD L+ F+ E + +L F++ L LPF L + +K+ +D +
Sbjct: 333 KYTYTLLRVRLPDGCLLQGTFYARERVAALYGFVREALQNDWLPFELLASGGQKLSEDEN 392
Query: 84 QDFFSASFIPGAIVYFSYDLPKGDDVVAANSGP 116
F +P A++ FS D +D+ AA + P
Sbjct: 393 LAFNECGLVPSALLTFSLDAAVLEDIRAAGTQP 425
>sp|P54730|UBX4_YEAST UBX domain-containing protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX4 PE=1 SV=1
Length = 416
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 9 IQKKIRE--AEEAARKSK-FTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPD 65
+ K++RE A +K+K ++ ++RV+FPD +++ F P+E M+++ + + + L +
Sbjct: 256 LTKRLREQSANNLPKKNKAISECLLRVKFPDRSHIQIAFKPNEDMRTVYNVVSQFLIDEN 315
Query: 66 LPFYLYTTPPKK 77
+PF L + P K
Sbjct: 316 MPFTLNQSHPFK 327
>sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1
Length = 436
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 20 ARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPFYLYTTPPKKII 79
A+K +K V+++R D TL+ F+ SET+ + ++ + D P+ + P+
Sbjct: 209 AQKLHSSKCVLQIRMTDGKTLKHEFNSSETLNDVRKWVDVNRTDGDCPYSFHRGIPRVTF 268
Query: 80 KD 81
KD
Sbjct: 269 KD 270
>sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus
caryophyllus GN=HCBT1 PE=1 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 3 ICIQVSIQKKIREAEEAARKSKF--------------TKAVIRVRFPDNHTLEVNFHPSE 48
+ IQ+ +R AEE KS + T AV+ + PDN+ E N HPS
Sbjct: 1 MSIQIKQSTMVRPAEETPNKSLWLSNIDMILRTPYSHTGAVLIYKQPDNN--EDNIHPSS 58
Query: 49 TMQSLVDFLKRVLSQPDLPFY 69
+M + L LS+ +PFY
Sbjct: 59 SMYFDANILIEALSKALVPFY 79
>sp|Q8CE96|TRM6_MOUSE tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit
TRM6 OS=Mus musculus GN=Trmt6 PE=1 SV=1
Length = 497
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPF 68
IQ+K R EE ++ A++ R D + FHP+ + SL+DF+ P PF
Sbjct: 343 IQEKQRRQEEQRKRHLEAAALLGERNADGLIVASRFHPTPLLLSLLDFVA-----PSRPF 397
Query: 69 YLYT 72
+Y
Sbjct: 398 VVYC 401
>sp|Q2T9V5|TRM6_BOVIN tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit
TRM6 OS=Bos taurus GN=TRMT6 PE=2 SV=1
Length = 497
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPF 68
IQ+K R EE ++ A++ R D + FHP+ + SL+DF+ P PF
Sbjct: 343 IQEKQRRQEEQKKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVA-----PSRPF 397
Query: 69 YLY 71
+Y
Sbjct: 398 VVY 400
>sp|Q9UJA5|TRM6_HUMAN tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit
TRM6 OS=Homo sapiens GN=TRMT6 PE=1 SV=1
Length = 497
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPF 68
IQ+K R EE ++ A++ R D + FHP+ + SL+DF+ P PF
Sbjct: 343 IQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVA-----PSRPF 397
Query: 69 YLY 71
+Y
Sbjct: 398 VVY 400
>sp|O23917|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus
caryophyllus GN=HCBT2 PE=1 SV=1
Length = 446
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 3 ICIQVSIQKKIREAEEAARKSKF--------------TKAVIRVRFPDNHTLEVNFHPSE 48
+ IQ+ +R AEE KS + T AV+ + PDN+ E N HPS
Sbjct: 1 MSIQIKQSTMVRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNN--EDNIHPSS 58
Query: 49 TMQSLVDFLKRVLSQPDLPFY 69
+M + L LS+ +P+Y
Sbjct: 59 SMYFDANILIEALSKALVPYY 79
>sp|Q8IZJ3|CPMD8_HUMAN C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
OS=Homo sapiens GN=CPAMD8 PE=1 SV=2
Length = 1885
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 106 GDDVVAANSGPFLHEDVMSLKGLEVIAEQPDPVQSAPEPATV-IRPPVTQDPKPAEKKSV 164
GDD+ + GP + ++ GLEV P+P A + T RPPV+ + +S
Sbjct: 1771 GDDLASVAPGPLQQDVKLNGAGLEVEDSDPEPEGEAEDRVTAGPRPPVSSGNLESSTQSA 1830
Query: 165 KP 166
P
Sbjct: 1831 SP 1832
>sp|B2JDN6|LEU1_BURP8 2-isopropylmalate synthase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=leuA PE=3 SV=1
Length = 516
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + E +A + VRF T +V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMSPEQV----LEQAKLAVRFARKFTNDVEFSPEDGSRSDMDFLCRVL 155
>sp|A9AJN4|LEU1_BURM1 2-isopropylmalate synthase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R E + +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPEQV----YEQARLAVRFARKFTDNVEFSPEDGSRSDMDFLCRVL 155
>sp|Q80W93|HYDIN_MOUSE Hydrocephalus-inducing protein OS=Mus musculus GN=Hydin PE=2 SV=2
Length = 5154
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 3 ICIQVSIQKKIREAEEAARKSKFTKAVI 30
+CI+ +I++ +REAEE+A +S T+ +
Sbjct: 2125 LCIRAAIEQSMREAEESAHESSMTQNTV 2152
>sp|A4JGE0|LEU1_BURVG 2-isopropylmalate synthase OS=Burkholderia vietnamiensis (strain G4
/ LMG 22486) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|Q0BDB9|LEU1_BURCM 2-isopropylmalate synthase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|A0K933|LEU1_BURCH 2-isopropylmalate synthase OS=Burkholderia cenocepacia (strain
HI2424) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|B1JVQ1|LEU1_BURCC 2-isopropylmalate synthase OS=Burkholderia cenocepacia (strain
MC0-3) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|Q1BV03|LEU1_BURCA 2-isopropylmalate synthase OS=Burkholderia cenocepacia (strain AU
1054) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|B1YTR7|LEU1_BURA4 2-isopropylmalate synthase OS=Burkholderia ambifaria (strain
MC40-6) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDLDFLCRVL 155
>sp|Q39ED5|LEU1_BURS3 2-isopropylmalate synthase OS=Burkholderia sp. (strain 383) GN=leuA
PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.8, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDMDFLCRVL 155
>sp|B4E5N2|LEU1_BURCJ 2-isopropylmalate synthase OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=leuA PE=3 SV=1
Length = 514
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T V F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNVEFSPEDGSRSDMDFLCRVL 155
>sp|Q63VP3|LEU1_BURPS 2-isopropylmalate synthase OS=Burkholderia pseudomallei (strain
K96243) GN=leuA PE=3 SV=1
Length = 515
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T + F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNIEFSPEDGSRSDMDFLCRVL 155
>sp|A3N7K7|LEU1_BURP6 2-isopropylmalate synthase OS=Burkholderia pseudomallei (strain
668) GN=leuA PE=3 SV=1
Length = 515
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T + F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNIEFSPEDGSRSDMDFLCRVL 155
>sp|Q3JUB9|LEU1_BURP1 2-isopropylmalate synthase OS=Burkholderia pseudomallei (strain
1710b) GN=leuA PE=3 SV=1
Length = 515
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T + F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNIEFSPEDGSRSDMDFLCRVL 155
>sp|A3NT94|LEU1_BURP0 2-isopropylmalate synthase OS=Burkholderia pseudomallei (strain
1106a) GN=leuA PE=3 SV=1
Length = 515
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 IQKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
++KK+R + F +A + VRF T + F P + +S +DFL RVL
Sbjct: 107 MEKKLRMTPDQV----FEQARLAVRFARKFTDNIEFSPEDGSRSDMDFLCRVL 155
>sp|O25114|Y347_HELPY Uncharacterized RNA pseudouridine synthase HP_0347 OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=HP_0347 PE=3 SV=1
Length = 298
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 10 QKKIREAEEAARKSKFTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVLSQPDLPFY 69
++++++ ++A RKS+ + V+R+ ++F P+E Q+LV F + D P
Sbjct: 37 KQRLKQNQQAVRKSQIIQGVVRL---------IHFKPNEKTQALV-FETKDFGVFDKPHQ 86
Query: 70 LYTTPPKKIIKDVSQDFFSASFIPGA 95
+YT P + D + F A
Sbjct: 87 VYTHPKGYFYHESLLDCIQSHFGKNA 112
>sp|Q5R8B4|CAP1_PONAB Adenylyl cyclase-associated protein 1 OS=Pongo abelii GN=CAP1 PE=2
SV=3
Length = 475
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 134 QPDPVQSAPEPATVIRPPVTQDPKPAEKK 162
Q P++S P+P + +P +Q PKPA KK
Sbjct: 289 QSGPLRSGPKPFSAPKPQTSQSPKPATKK 317
>sp|Q12B47|LEU1_POLSJ 2-isopropylmalate synthase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=leuA PE=3 SV=1
Length = 513
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 27 KAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
+A + VRF N +V F P + +S VD+L RVL
Sbjct: 121 QARLSVRFARNLVADVEFSPEDGYRSDVDYLCRVL 155
>sp|Q21VZ1|LEU1_RHOFD 2-isopropylmalate synthase OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=leuA PE=3 SV=1
Length = 512
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 25 FTKAVIRVRFPDNHTLEVNFHPSETMQSLVDFLKRVL 61
F +A + VRF N +V F P + +S DFL RV+
Sbjct: 119 FEQAKLAVRFARNLVADVEFSPEDAYRSDEDFLCRVI 155
>sp|P03306|POLG_FMDV1 Genome polyprotein OS=Foot-and-mouth disease virus (strain A10-61)
PE=1 SV=2
Length = 2332
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 25/55 (45%)
Query: 70 LYTTPPKKIIKDVSQDFFSASFIPGAIVYFSYDLPKGDDVVAANSGPFLHEDVMS 124
LY P IK SQD + I A ++DL K V +N GPF DV S
Sbjct: 908 LYCPRPLLAIKVTSQDRYKQKIIAPAKQLLNFDLLKLAGDVESNLGPFFFADVRS 962
>sp|A0LGY7|RUVA_SYNFM Holliday junction ATP-dependent DNA helicase RuvA
OS=Syntrophobacter fumaroxidans (strain DSM 10017 /
MPOB) GN=ruvA PE=3 SV=1
Length = 197
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 94 GAIVYFS----YDLPKGDDVVAANSGPFLHEDVMSLKGLEVIAEQ 134
G IVY YDLP D VA N + ED + L G +AE+
Sbjct: 25 GYIVYVPLSTFYDLPGPGDTVALNIHTHIREDAIQLYGFRTVAEK 69
>sp|P0C671|CF222_HUMAN Uncharacterized protein C6orf222 OS=Homo sapiens GN=C6orf222 PE=1
SV=1
Length = 652
Score = 29.6 bits (65), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 126 KGLEVIAEQPDPVQSAPEPATVIRPPVTQDPKPAEKK 162
+G E I++ P+P+++A EPA +R D KP+ KK
Sbjct: 124 RGKEGISQHPEPLEAAGEPA--LRKKAHHDKKPSRKK 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,895,737
Number of Sequences: 539616
Number of extensions: 2775021
Number of successful extensions: 10797
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 10697
Number of HSP's gapped (non-prelim): 142
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)