BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046728
(325 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 155/261 (59%), Gaps = 17/261 (6%)
Query: 43 IAVKRLKTLNAKA-EMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+AVKRLK + E++F EVE++ HRNLL LRGF ERL+VY YM N S+ +
Sbjct: 65 VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
L R LDW +R IA+GSA G+A D+KA+N+LLD +FEA V
Sbjct: 125 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 184
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP-- 206
DFG AKL+ H+ V+GT+G++APEY GK S+ DV+ +GV+LLELI+ ++
Sbjct: 185 DFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
L +L ++ WV +++ E + D L+G + ++++ ++ +AL CT S+P R
Sbjct: 245 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 267 PTMTDVVDWLKG-GLGRRTKD 286
P M++VV L+G GL R ++
Sbjct: 305 PKMSEVVRMLEGDGLAERWEE 325
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 17/261 (6%)
Query: 43 IAVKRLKTLNAKA-EMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+AVKRLK + E++F EVE++ HRNLL LRGF ERL+VY YM N S+ +
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
L R LDW +R IA+GSA G+A D+KA+N+LLD +FEA V
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP-- 206
DFG AKL+ H+ V+G +G++APEY GK S+ DV+ +GV+LLELI+ ++
Sbjct: 177 DFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
L +L ++ WV +++ E + D L+G + ++++ ++ +AL CT S+P R
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 267 PTMTDVVDWLKG-GLGRRTKD 286
P M++VV L+G GL R ++
Sbjct: 297 PKMSEVVRMLEGDGLAERWEE 317
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 13/244 (5%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
++A+KR +++ EF E+E L RH +L+ L GF +E +++Y YM N +L
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFG 151
HL+G P + W +R+ I IG+A G+ D+K+ N+LLD +F K+ DFG
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG 184
Query: 152 FAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL-EK 209
+K + G TH+ VKGTLGY+ PEY + G++++ DVYSFGV+L E++ A+ + +
Sbjct: 185 ISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
LP + ++ +W G E I DP L K + L+ A++C + E+RP+M
Sbjct: 245 LPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
Query: 270 TDVV 273
DV+
Sbjct: 304 GDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 137/244 (56%), Gaps = 13/244 (5%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
++A+KR +++ EF E+E L RH +L+ L GF +E +++Y YM N +L
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFG 151
HL+G P + W +R+ I IG+A G+ D+K+ N+LLD +F K+ DFG
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG 184
Query: 152 FAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL-EK 209
+K + TH+ VKGTLGY+ PEY + G++++ DVYSFGV+L E++ A+ + +
Sbjct: 185 ISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
LP + ++ +W G E I DP L K + L+ A++C + E+RP+M
Sbjct: 245 LPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
Query: 270 TDVV 273
DV+
Sbjct: 304 GDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 27/180 (15%)
Query: 43 IAVKRLKTL----NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK+L + + + +F E++++ + +H NL+ L GF + GD+ +VY YMPN S
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 99 LITHLHGRLAPDCL-----LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
L+ L CL L WH R IA G+A GI DIK++N+LLD F
Sbjct: 117 LLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 170
Query: 144 EAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
AK++DFG A+ T M +R+ GT Y+APE A+ G+++ D+YSFGV+LLE+I+
Sbjct: 171 TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 27/180 (15%)
Query: 43 IAVKRLKTL----NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK+L + + + +F E++++ + +H NL+ L GF + GD+ +VY YMPN S
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 99 LITHLHGRLAPDCL-----LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
L+ L CL L WH R IA G+A GI DIK++N+LLD F
Sbjct: 117 LLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 170
Query: 144 EAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
AK++DFG A+ T M R+ GT Y+APE A+ G+++ D+YSFGV+LLE+I+
Sbjct: 171 TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 27/180 (15%)
Query: 43 IAVKRLKTL----NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK+L + + + +F E++++ + +H NL+ L GF + GD+ +VY YMPN S
Sbjct: 51 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 110
Query: 99 LITHLHGRLAPDCL-----LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
L+ L CL L WH R IA G+A GI DIK++N+LLD F
Sbjct: 111 LLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 164
Query: 144 EAKVADFGFAKLIPDGVTH-MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
AK++DFG A+ M R+ GT Y+APE A+ G+++ D+YSFGV+LLE+I+
Sbjct: 165 TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 27/180 (15%)
Query: 43 IAVKRLKTL----NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK+L + + + +F E+++ + +H NL+ L GF + GD+ +VY Y PN S
Sbjct: 48 VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGS 107
Query: 99 LITHLHGRLAPDCL-----LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
L+ L CL L WH R IA G+A GI DIK++N+LLD F
Sbjct: 108 LLDRL------SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 161
Query: 144 EAKVADFGFAKLIPDGVTHM-TTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
AK++DFG A+ + +R+ GT Y APE A+ G+++ D+YSFGV+LLE+I+
Sbjct: 162 TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK N E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 208 GTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 263
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G + L + V +A A G+A D++A+N+L+ + K
Sbjct: 264 GSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 321
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG +LI D K + + APE A++G+ + DV+SFG+LL EL + K
Sbjct: 322 VADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT--KG 379
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C +PE R
Sbjct: 380 RVPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPEER 426
Query: 267 PTM 269
PT
Sbjct: 427 PTF 429
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQL---YAVVSEEPIYIVTEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPTM 269
RPT
Sbjct: 258 ERPTF 262
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 37/244 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPT 268
RPT
Sbjct: 258 ERPT 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 30 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 83
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 84 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 141
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 142 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 202 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 246
Query: 265 NRPTM 269
RPT
Sbjct: 247 ERPTF 251
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 32 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 85
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 86 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 143
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 144 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 204 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 248
Query: 265 NRPTM 269
RPT
Sbjct: 249 ERPTF 253
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPTM 269
RPT
Sbjct: 258 ERPTF 262
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVCEYMSK 96
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G + L + V +A A G+A D++A+N+L+ + K
Sbjct: 97 GSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C +PE R
Sbjct: 214 -VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPEER 259
Query: 267 PTM 269
PT
Sbjct: 260 PTF 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPTM 269
RPT
Sbjct: 258 ERPTF 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 31 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIXIVTEYM 84
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G L + V +A A G+A D++A+N+L+ +
Sbjct: 85 SKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 142
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 143 CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 202
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C PE
Sbjct: 203 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPE 247
Query: 265 NRPTM 269
RPT
Sbjct: 248 ERPTF 252
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G + L + V +A A G+A D+ A+N+L+ +
Sbjct: 95 SKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPTM 269
RPT
Sbjct: 258 ERPTF 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 37/244 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVMEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPT 268
RPT
Sbjct: 258 ERPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 41 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 94
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L G + L + V +A A G+A D++A+N+L+ +
Sbjct: 95 SKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C +PE
Sbjct: 213 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKDPE 257
Query: 265 NRPTM 269
RPT
Sbjct: 258 ERPTF 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 207 GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 262
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G L + V +A A G+A D++A+N+L+ + K
Sbjct: 263 GSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + K
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT--KG 378
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 379 RVPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 425
Query: 267 PTM 269
PT
Sbjct: 426 PTF 428
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 37/245 (15%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 34 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 87
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
SL+ L G L + V +A A G+A D++A+N+L+ +
Sbjct: 88 SKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 145
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
KVADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL +
Sbjct: 146 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
Query: 205 KPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPE 264
+ PG V R+++ V++G + P +S+ + +C PE
Sbjct: 206 R--VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPE 250
Query: 265 NRPTM 269
RPT
Sbjct: 251 ERPTF 255
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 207 GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 262
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G L + V +A A G+A D++A+N+L+ + K
Sbjct: 263 GSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + K
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT--KG 378
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 379 RVPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 425
Query: 267 PTM 269
PT
Sbjct: 426 PTF 428
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 290 GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 345
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G L + V +A A G+A D++A+N+L+ + K
Sbjct: 346 GSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 403
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + K
Sbjct: 404 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT--KG 461
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 462 RVPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 508
Query: 267 PTM 269
PT
Sbjct: 509 PTF 511
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G ++A+K LK E F E +++ ++RH L+ L YA E IV +YM
Sbjct: 207 GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVGEYMSK 262
Query: 97 HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
SL+ L G L + V +A A G+A D++A+N+L+ + K
Sbjct: 263 GSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + K
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT--KG 378
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 379 RVPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 425
Query: 267 PTM 269
PT
Sbjct: 426 PTF 428
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 38 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 91
Query: 95 PNHSLITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAK 146
SL+ L G L L+D +++ + E + D++A+N+L+ + K
Sbjct: 92 NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 151
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + +
Sbjct: 152 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 210
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 211 -VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 256
Query: 267 PTM 269
PT
Sbjct: 257 PTF 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 33/243 (13%)
Query: 39 GDDQIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYM 94
G ++A+K LK T++ +A F E +++ ++RH L+ L YA E IV +YM
Sbjct: 38 GTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYM 91
Query: 95 PNHSLITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAK 146
SL+ L G L L+D +++ + E + D++A+N+L+ + K
Sbjct: 92 NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 151
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
VADFG A+LI D K + + APE A++G+ + DV+SFG+LL EL + +
Sbjct: 152 VADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 210
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
PG V R+++ V++G + P +S+ + +C PE R
Sbjct: 211 -VPYPGMVNREVLD----QVERG-YRMPCPPECP--------ESLHDLMCQCWRKEPEER 256
Query: 267 PTM 269
PT
Sbjct: 257 PTF 259
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 29/249 (11%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPN 96
G+ ++A+K LK E F E +I+ +++H L+ L YA E IV +YM
Sbjct: 32 GNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL---YAVVSEEPIYIVTEYMNK 87
Query: 97 HSLITHL---HGR-LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVA 148
SL+ L GR L L+D +V+ + E + D++++N+L+ K+A
Sbjct: 88 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIA 147
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
DFG A+LI D K + + APE A++G+ + DV+SFG+LL EL++ +
Sbjct: 148 DFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR--V 205
Query: 209 KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPT 268
PG R++++ V++G + +D S+ + + C +PE RPT
Sbjct: 206 PYPGMNNREVLE----QVERG---------YRMPCPQDCPISLHELMIHCWKKDPEERPT 252
Query: 269 MTDVVDWLK 277
+ +L+
Sbjct: 253 FEYLQSFLE 261
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 59 FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYM--PNHSLITHLHGRLAPDCLLDWH 116
F EV ++ H+N++ + D +V +Y+ P S HG L+ D +++
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 117 RRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG 172
++ I A + DIK N+L+D++ K+ DFG AK + + T V GT+
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 173 YLAPEYAMWGKVSDSC-DVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
Y +PE A G+ +D C D+YS G++L E++ + P G I A
Sbjct: 178 YFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEPPFN---GETAVSI-----------AI 222
Query: 232 EHIAD--PRLKGKFNRDQLKSMVLIALRCTDSNPENR-PTMTDVVDWLKGGL--GRRTKD 286
+HI D P + +D +S+ + LR T+ + NR T+ ++ D L L R +D
Sbjct: 223 KHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANED 282
Query: 287 V 287
V
Sbjct: 283 V 283
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+A+K++++ + + F VE+ L RV H N++ L G A + +V +Y SL
Sbjct: 35 VAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNV 90
Query: 103 LHGRLAPDCLLDWHRRVSIAIGSAEGIA-------------DIKASNVLLDTDFEA-KVA 148
LHG P +S + ++G+A D+K N+LL K+
Sbjct: 91 LHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 149
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
DFG A D THMT KG+ ++APE S+ CDV+S+G++L E+I+ +KP +
Sbjct: 150 DFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
Query: 209 KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPT 268
++ G R + W V G + ++ K + + RC +P RP+
Sbjct: 206 EIGGPAFR--IMWA---VHNGT---------RPPLIKNLPKPIESLMTRCWSKDPSQRPS 251
Query: 269 MTDVV 273
M ++V
Sbjct: 252 MEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+A+K++++ + + F VE+ L RV H N++ L G A + +V +Y SL
Sbjct: 34 VAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNV 89
Query: 103 LHGRLAPDCLLDWHRRVSIAIGSAEGIA-------------DIKASNVLLDTDFEA-KVA 148
LHG P +S + ++G+A D+K N+LL K+
Sbjct: 90 LHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
DFG A D THMT KG+ ++APE S+ CDV+S+G++L E+I+ +KP +
Sbjct: 149 DFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
Query: 209 KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPT 268
++ G R + W V G + ++ K + + RC +P RP+
Sbjct: 205 EIGGPAFR--IMWA---VHNGT---------RPPLIKNLPKPIESLMTRCWSKDPSQRPS 250
Query: 269 MTDVV 273
M ++V
Sbjct: 251 MEEIV 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYD 92
R E +AVK L + AE EF EV I+ R+RH N++ G IV +
Sbjct: 55 RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114
Query: 93 YMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLD 140
Y+ SL LH A + LD RR+S+A A+G+ ++K+ N+L+D
Sbjct: 115 YLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD 173
Query: 141 TDFEAKVADFGFAKLIPDGVTHMTTR-VKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
+ KV DFG ++L T ++++ GT ++APE ++ DVYSFGV+L E
Sbjct: 174 KKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231
Query: 200 LISAKKPLEKL 210
L + ++P L
Sbjct: 232 LATLQQPWGNL 242
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYD 92
R E +AVK L + AE EF EV I+ R+RH N++ G IV +
Sbjct: 55 RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114
Query: 93 YMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLD 140
Y+ SL LH A + LD RR+S+A A+G+ D+K+ N+L+D
Sbjct: 115 YLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVD 173
Query: 141 TDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLEL 200
+ KV DFG ++L + GT ++APE ++ DVYSFGV+L EL
Sbjct: 174 KKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
Query: 201 ISAKKP 206
+ ++P
Sbjct: 233 ATLQQP 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 27/201 (13%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL-IVYDYMPNHSL 99
+++AVK +K N F E ++ ++RH NL+ L G L IV +YM SL
Sbjct: 45 NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102
Query: 100 ITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
+ +L R L DCLL + V A+ EG D+ A NVL+ D AKV+DFG
Sbjct: 103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 152 FAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
K +T+ G L + APE K S DV+SFG+LL E+ S + P
Sbjct: 163 LTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 216
Query: 209 KLPGGVKRDIVQWVTPYVQKG 229
++P +D+V P V+KG
Sbjct: 217 RIP---LKDVV----PRVEKG 230
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 27/201 (13%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL-IVYDYMPNHSL 99
+++AVK +K N F E ++ ++RH NL+ L G L IV +YM SL
Sbjct: 30 NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 100 ITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
+ +L R L DCLL + V A+ EG D+ A NVL+ D AKV+DFG
Sbjct: 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 152 FAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
K +T+ G L + APE K S DV+SFG+LL E+ S + P
Sbjct: 148 LTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201
Query: 209 KLPGGVKRDIVQWVTPYVQKG 229
++P +D+V P V+KG
Sbjct: 202 RIP---LKDVV----PRVEKG 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 27/201 (13%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL-IVYDYMPNHSL 99
+++AVK +K N F E ++ ++RH NL+ L G L IV +YM SL
Sbjct: 217 NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274
Query: 100 ITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
+ +L R L DCLL + V A+ EG D+ A NVL+ D AKV+DFG
Sbjct: 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 152 FAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
K +T+ G L + APE K S DV+SFG+LL E+ S + P
Sbjct: 335 LTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 388
Query: 209 KLPGGVKRDIVQWVTPYVQKG 229
++P +D+V P V+KG
Sbjct: 389 RIP---LKDVV----PRVEKG 402
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL-IVYDYMPNHSL 99
+++AVK +K N F E ++ ++RH NL+ L G L IV +YM SL
Sbjct: 36 NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 93
Query: 100 ITHLHGR----LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
+ +L R L DCLL + V A+ EG D+ A NVL+ D AKV+DFG
Sbjct: 94 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 152 FAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
K +T+ G L + APE S DV+SFG+LL E+ S + P
Sbjct: 154 LTK------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYP 207
Query: 209 KLPGGVKRDIVQWVTPYVQKG 229
++P +D+V P V+KG
Sbjct: 208 RIP---LKDVV----PRVEKG 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 42 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 99
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 100 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 154 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 214 RI--PYPGMTNPEVIQ 227
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 36 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 93
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 94 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 148 CKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 208 RI--PYPGMTNPEVIQ 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 44 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 101
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 102 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 155
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 156 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 216 RI--PYPGMTNPEVIQ 229
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 37 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 94
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 95 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 148
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 149 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 209 RI--PYPGMTNPEVIQ 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 36 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 93
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 94 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 208 RI--PYPGMTNPEVIQ 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 45 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 102
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 103 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 156
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 157 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 217 RI--PYPGMTNPEVIQ 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 36 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 93
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 94 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 208 RI--PYPGMTNPEVIQ 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 38 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 95
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 96 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 149
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 150 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 210 RI--PYPGMTNPEVIQ 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 42 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 99
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 100 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 153
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 154 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 214 RI--PYPGMTNPEVIQ 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 41 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 98
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 99 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 152
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 153 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 213 RI--PYPGMTNPEVIQ 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 46 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 103
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 104 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 157
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 158 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 218 RI--PYPGMTNPEVIQ 231
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 36 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 93
Query: 99 LITHLHG----RLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
L+ L +L + LLD +A AEG+A D++A+N+L+
Sbjct: 94 LVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A+LI D K + + APE +G + DV+SFG+LL E+++
Sbjct: 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 205 KPLEKLPGGVKRDIVQ 220
+ PG +++Q
Sbjct: 208 RI--PYPGMTNPEVIQ 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 40 DDQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
D +A+K LK + +F E I+G+ H N++ L G G +IV +YM N S
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 99 LITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L T L G+ L+ R V + + D+ A NVL+D++ KV+DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 152 FAKLIPD--GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
++++ D + TT K + + APE + S + DV+SFGV++ E+++ ++P
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 209 KLPGGVKRDIVQWV 222
+ RD++ V
Sbjct: 257 NM---TNRDVISSV 267
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 31 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 88
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVA 148
L+ L + L ++ + +A AEG+A D++A+N+L+ K+A
Sbjct: 89 LVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 146
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
DFG A+LI D K + + APE +G + DV+SFG+LL E+++ +
Sbjct: 147 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-- 204
Query: 209 KLPGGVKRDIVQ 220
PG +++Q
Sbjct: 205 PYPGMTNPEVIQ 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 40 DDQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
D +A+K LK + +F E I+G+ H N++ L G G +IV +YM N S
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 99 LITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L T L G+ L+ R V + + D+ A NVL+D++ KV+DFG
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 152 FAKLIPD--GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLE 208
++++ D TT K + + APE + S + DV+SFGV++ E+++ ++P
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 209 KLPGGVKRDIVQWV 222
+ RD++ V
Sbjct: 257 NM---TNRDVISSV 267
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---- 106
+++K E EV +L ++H N++ R + IV DY L ++ +
Sbjct: 62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D +LDW ++ +A+ DIK+ N+ L D ++ DFG A+++ +
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVE 180
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWV 222
+ GT YL+PE ++ D+++ G +L EL + K E G +K +++ +
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE--AGSMKNLVLKII 238
Query: 223 TPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVDWLKGGLGR 282
+ G+F P + ++ D L+S+V + NP +RP++ +++ KG + +
Sbjct: 239 S-----GSF-----PPVSLHYSYD-LRSLVSQLFK---RNPRDRPSVNSILE--KGFIAK 282
Query: 283 RTK 285
R +
Sbjct: 283 RIE 285
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G ++AVK LK + + F E ++ +++H+ L+ L + I+ +YM N S
Sbjct: 32 GHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGS 89
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVA 148
L+ L + L ++ + +A AEG+A +++A+N+L+ K+A
Sbjct: 90 LVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIA 147
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
DFG A+LI D K + + APE +G + DV+SFG+LL E+++ +
Sbjct: 148 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-- 205
Query: 209 KLPGGVKRDIVQ 220
PG +++Q
Sbjct: 206 PYPGMTNPEVIQ 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 222 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 270 TDV 272
D+
Sbjct: 280 RDL 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 225 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 270 TDV 272
D+
Sbjct: 283 RDL 285
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 40 DDQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
D +A+K LK K +F E I+G+ H N++ L G G +IV ++M N +
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFE 144
L L D V +G GIA D+ A N+L++++
Sbjct: 131 LDAFLRKH-------DGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLV 183
Query: 145 AKVADFGFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KV+DFG +++I D + TT K + + APE + K + + DV+S+G+++ E++S
Sbjct: 184 CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 23/243 (9%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +AVK +K + +E EF E + + ++ H L+ G + IV +Y+ N
Sbjct: 31 GQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC 89
Query: 99 LITHL--HGR-LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L HG+ L P LL+ V + E D+ A N L+D D KV+DFG
Sbjct: 90 LLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG 149
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
+ + D + K + + APE + K S DV++FG+L+ E+ S L K+P
Sbjct: 150 MTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS----LGKMP 205
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTD 271
+ + V V +G + P L ++ I C PE RPT
Sbjct: 206 YDLYTN--SEVVLKVSQG--HRLYRPHLAS-------DTIYQIMYSCWHELPEKRPTFQQ 254
Query: 272 VVD 274
++
Sbjct: 255 LLS 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL T
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L G+ L+ R +S + + D+ A N+L++++ KV+DFG ++
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 155 LIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKLP 211
++ D + T K + + APE + K + + DV+S+G+++ E++S ++P ++
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM- 231
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTD 271
+D+++ V++G RL D ++ + L C +RP +
Sbjct: 232 --TNQDVIK----AVEEGY-------RLPSPM--DCPAALYQLMLDCWQKERNSRPKFDE 276
Query: 272 VVDWL 276
+V+ L
Sbjct: 277 IVNML 281
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 239
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 240 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 270 TDV 272
D+
Sbjct: 298 RDL 300
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 167 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 226
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 227 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 270 TDV 272
D+
Sbjct: 285 RDL 287
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 239
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 240 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 270 TDV 272
D+
Sbjct: 298 RDL 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 161 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 220
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 221 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 270 TDV 272
D+
Sbjct: 279 RDL 281
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 166 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 225
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 226 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 270 TDV 272
D+
Sbjct: 284 RDL 286
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 225 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 270 TDV 272
D+
Sbjct: 283 RDL 285
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 162 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 222 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 270 TDV 272
D+
Sbjct: 280 RDL 282
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 162 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 222 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 270 TDV 272
D+
Sbjct: 280 RDL 282
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 193 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 252
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 253 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 270 TDV 272
D+
Sbjct: 311 RDL 313
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 160 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 219
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 220 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 270 TDV 272
D+
Sbjct: 278 RDL 280
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 15/244 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 169 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 228
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 229 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 270 TDVV 273
D+
Sbjct: 287 RDLA 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 168 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 227
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 228 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 270 TDV 272
D+
Sbjct: 286 RDL 288
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +Y+P SL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I ++ N+L++ + K+ DFG
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 163 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 222
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 223 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 270 TDV 272
D+
Sbjct: 281 RDL 283
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K ++ A +E +F E E++ ++ H L+ L G +V+++M + L
Sbjct: 30 DKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 89 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 142
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 143 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 200
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 201 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 245
Query: 266 RPTMT 270
RP +
Sbjct: 246 RPAFS 250
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K ++ A +E +F E E++ ++ H L+ L G +V+++M + L
Sbjct: 32 DKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 91 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 144
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 202
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 203 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 266 RPTMT 270
RP +
Sbjct: 248 RPAFS 252
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K ++ A +E +F E E++ ++ H L+ L G +V+++M + L
Sbjct: 32 DKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 91 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKV 144
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 202
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 203 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 266 RPTMT 270
RP +
Sbjct: 248 RPAFS 252
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K ++ A +E +F E E++ ++ H L+ L G +V+++M + L
Sbjct: 35 DKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 94 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 147
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 148 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 205
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 206 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 250
Query: 266 RPTMT 270
RP +
Sbjct: 251 RPAFS 255
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK K ++F E I+G+ H N++ L G + +I+ +YM N +L
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFEAKV 147
L + D V +G GIA D+ A N+L++++ KV
Sbjct: 136 FLREK-------DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKV 188
Query: 148 ADFGFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
+DFG ++++ D T+ T+ K + + APE + K + + DV+SFG+++ E+++
Sbjct: 189 SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K +K + +E +F E E++ ++ H L+ L G +V+++M + L
Sbjct: 52 DKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 110
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 111 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 164
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 165 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 222
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 223 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPED 267
Query: 266 RPTMT 270
RP +
Sbjct: 268 RPAFS 272
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G A+++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 42 QIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T++ +A +E E ++ ++H L+ L + I+ +YM SL
Sbjct: 39 KVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ L LL + + + AEG+A D++A+NVL+ K+AD
Sbjct: 96 LDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIAD 153
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEK 209
FG A++I D K + + APE +G + DV+SFG+LL E+++ K
Sbjct: 154 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKI--P 211
Query: 210 LPGGVKRDIV 219
PG D++
Sbjct: 212 YPGRTNADVM 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E+EIL ++H N++ +G Y+ G L ++ +++P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 101 THLHG---RLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
+L R+ LL + ++ +G+ I D+ N+L++ + K+ DFG
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLP 211
K++P + G + + APE K S + DV+SFGV+L EL + + + P
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
Query: 212 GGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ--LKSMVLIALRCTDSNPENRPTM 269
R I Q F I + G+ R + +I C ++N RP+
Sbjct: 225 AEFMRMIGN--DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 270 TDV 272
D+
Sbjct: 283 RDL 285
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 47 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 166 LSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 224
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 225 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 267
Query: 269 M 269
Sbjct: 268 F 268
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 32 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 90
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 151 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 209
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 210 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 252
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 123 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 179
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 180 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 106 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 162
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 163 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 31 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 89
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 90 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 149
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 150 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 208
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 209 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 251
Query: 269 M 269
Sbjct: 252 F 252
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 133 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 189
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 190 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 38 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 96
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 97 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 156
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 157 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 215
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 216 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 258
Query: 269 M 269
Sbjct: 259 F 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 47 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 166 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 224
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 225 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 267
Query: 269 M 269
Sbjct: 268 F 268
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 27 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 85
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 86 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 145
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 146 LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 204
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 205 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 247
Query: 269 M 269
Sbjct: 248 F 248
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G +A+K +K + +E EF E +++ + H L+ L G I+ +YM N
Sbjct: 32 GQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 90
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L+ +L R LL+ + V A+ E D+ A N L++ KV+DFG
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ + D + K + + PE M+ K S D+++FGVL+ E+ S K P E+
Sbjct: 151 LSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER- 209
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPENRPT 268
+ EHIA + R L S + I C + RPT
Sbjct: 210 --------------FTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPT 252
Query: 269 M 269
Sbjct: 253 F 253
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 39/245 (15%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
D++A+K ++ A +E +F E E++ ++ H L+ L G +V ++M + L
Sbjct: 33 DKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 101 THLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
+L G A + LL + + EG+A D+ A N L+ + KV
Sbjct: 92 DYLRTQRGLFAAETLL------GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 145
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+DFG + + D +T K + + +PE + + S DV+SFGVL+ E+ S K
Sbjct: 146 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK-- 203
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS--MVLIALRCTDSNPEN 265
PY + E + D + + +L S + I C PE+
Sbjct: 204 ---------------IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPED 248
Query: 266 RPTMT 270
RP +
Sbjct: 249 RPAFS 253
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV +YM N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G +++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK K +F E I+G+ H N++ L G +I+ +YM N SL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L GR L+ R + + ++ D+ A N+L++++ KV+DFG ++
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 155 LIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
++ D + T K + + APE + K + + DV+S+G+++ E++S
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK K +F E I+G+ H N++ L G +I+ +YM N SL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L GR L+ R + + ++ D+ A N+L++++ KV+DFG ++
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 155 LIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
++ D + T K + + APE + K + + DV+S+G+++ E++S
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 66 LGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIA 122
+G + H +++ L G G +L+ Y+P SL+ H+ G L P LL+W +++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 145
Query: 123 IGSAE--GIA--DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGYLAPE 177
+ E G+ ++ A NVLL + + +VADFG A L+ PD + + K + ++A E
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 178 YAMWGKVSDSCDVYSFGVLLLELIS 202
+GK + DV+S+GV + EL++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
++AVK +K + E F E ++ ++H L+ L + I+ ++M SL+
Sbjct: 41 KVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLD 98
Query: 102 HL---HGRLAP-DCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
L G P L+D+ ++ AEG+A D++A+N+L+ K+
Sbjct: 99 FLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNYIHRDLRAANILVSASLVCKI 152
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
ADFG A++I D K + + APE +G + DV+SFG+LL+E+++ +
Sbjct: 153 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI- 211
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRP 267
PG ++++ +++G R+ N + + I +RC + PE RP
Sbjct: 212 -PYPGMSNPEVIR----ALERGY-------RMPRPENCPE--ELYNIMMRCWKNRPEERP 257
Query: 268 TM 269
T
Sbjct: 258 TF 259
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK K +F E I+G+ H N++ L G +I+ +YM N SL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L GR L+ R + + ++ D+ A N+L++++ KV+DFG ++
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 155 LIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
++ D + T K + + APE + K + + DV+S+G+++ E++S
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 66 LGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIA 122
+G + H +++ L G G +L+ Y+P SL+ H+ G L P LL+W +++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 123 IGSAE--GIA--DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGYLAPE 177
+ E G+ ++ A NVLL + + +VADFG A L+ PD + + K + ++A E
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 178 YAMWGKVSDSCDVYSFGVLLLELIS 202
+GK + DV+S+GV + EL++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK+ K +F E I+G+ H N++ L G +I+ ++M N SL +
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFEAKV 147
L D V +G GIA D+ A N+L++++ KV
Sbjct: 124 FLRQN-------DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKV 176
Query: 148 ADFGFAKLIPDGVTHMTTRV----KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
+DFG ++ + D + T K + + APE + K + + DV+S+G+++ E++S
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
++AVK +K + E F E ++ ++H L+ L + I+ ++M SL+
Sbjct: 214 KVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLD 271
Query: 102 HL---HGRLAP-DCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
L G P L+D+ ++ AEG+A D++A+N+L+ K+
Sbjct: 272 FLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNYIHRDLRAANILVSASLVCKI 325
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
ADFG A++I D K + + APE +G + DV+SFG+LL+E+++ +
Sbjct: 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI- 384
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRP 267
PG ++++ +++G R+ N + + I +RC + PE RP
Sbjct: 385 -PYPGMSNPEVIR----ALERGY-------RMPRPENCPE--ELYNIMMRCWKNRPEERP 430
Query: 268 TM 269
T
Sbjct: 431 TF 432
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 50 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 105
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS--- 162
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 163 RRTTLSGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 222 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 257
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL-IVYDYM 94
RETG+ + +K L + + + F EV+++ + H N+L G D+RL + +Y+
Sbjct: 32 RETGE-VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYI 89
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
+L + D W +RVS A A G+A D+ + N L+ +
Sbjct: 90 KGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN 146
Query: 145 AKVADFGFAKLI------PDGVTHMTT-------RVKGTLGYLAPEYAMWGKVSDSCDVY 191
VADFG A+L+ P+G+ + V G ++APE + DV+
Sbjct: 147 VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVF 206
Query: 192 SFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
SFG++L E+I + P + R + + +G + P F
Sbjct: 207 SFGIVLCEIIGR---VNADPDYLPRTMDFGLN---VRGFLDRYCPPNCPPSF-------- 252
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLK 277
I +RC D +PE RP+ + WL+
Sbjct: 253 FPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 32/240 (13%)
Query: 42 QIAVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T++ +A +E E ++ ++H L+ L + I+ ++M SL
Sbjct: 38 KVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ L LL + + + AEG+A D++A+NVL+ K+AD
Sbjct: 95 LDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIAD 152
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEK 209
FG A++I D K + + APE +G + +V+SFG+LL E+++ K
Sbjct: 153 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI--P 210
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
PG D++ ++ + E+ D + I C E RPT
Sbjct: 211 YPGRTNADVMSALSQGYRMPRMENCPD-------------ELYDIMKMCWKEKAEERPTF 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + L +L+
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSK-- 109
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 110 -FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 166
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 167 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 225 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 104
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 161
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 RRTELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 221 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 42/236 (17%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 109
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 166
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE--KLPGGVKR-DIV 219
T + GTL YL PE + D++S GVL E + K P E KR V
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 220 QWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
++ P +V +GA + I+ R NP RP + +V++
Sbjct: 227 EFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPXLREVLE 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK ++ E F EV +L + RH N+L G Y D IV + SL
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLY 119
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + IA +A+G+ D+K++N+ L K+ DF
Sbjct: 120 KHLH---VQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMW---GKVSDSCDVYSFGVLLLELISAKKP 206
G A + + + G++ ++APE S DVYS+G++L EL++ + P
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
+ RD + ++ V +G A P L K ++ K+M + C E R
Sbjct: 237 YSHINN---RDQIIFM---VGRG----YASPDL-SKLYKNCPKAMKRLVADCVKKVKEER 285
Query: 267 PTMTDVVD 274
P ++
Sbjct: 286 PLFPQILS 293
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 75 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 130
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 187
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
T + GTL YL PE + G++ D D++S GVL E + K P E
Sbjct: 188 RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 164
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 165 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 95
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH A + + + + IA +A G+ D+K++N+ L D K+ DF
Sbjct: 96 HHLH---ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF 152
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKVSDS------CDVYSFGVLLLELISA 203
G A + +H ++ G++ ++APE ++ DS DVY+FG++L EL++
Sbjct: 153 GLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDSNPYSFQSDVYAFGIVLYELMTG 209
Query: 204 KKPLEKL 210
+ P +
Sbjct: 210 QLPYSNI 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHG-RLAPDCLLDWHRRVS 120
E ++ ++H N++ LRG +V ++ L L G R+ PD L++W +++
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA 115
Query: 121 IAIGSAEGIA-------DIKASNVLLDTDFE--------AKVADFGFAKLIPDGVTHMTT 165
+ A D+K+SN+L+ E K+ DFG A+ H TT
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTT 170
Query: 166 RVK--GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPG-----GVKRDI 218
++ G ++APE S DV+S+GVLL EL++ + P + G GV +
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230
Query: 219 VQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
+ P F + + C + +P +RP+ T+++D L
Sbjct: 231 LALPIPSTCPEPFAKLME--------------------DCWNPDPHSRPSFTNILDQL 268
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 66 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 121
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 122 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 178
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
T + GTL YL PE + G++ D D++S GVL E + K P E
Sbjct: 179 RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 108
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 109 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 166
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 167 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 225 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 164
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 165 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 45 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 100
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 101 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 158
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 159 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 217 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 103
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 161
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 -RRTXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 220 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 104
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 161
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 221 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 107
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 108 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 165
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 166 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 224 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 47 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 102
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 103 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 160
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 161 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 219 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 104
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 105 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 163 -RRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 221 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 104
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 161
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 RRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 221 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 109
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 166
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 167 RRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 226 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLY 107
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH A + + + + IA +A G+ D+K++N+ L D K+ DF
Sbjct: 108 HHLH---ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 151 GFA--KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS------CDVYSFGVLLLELIS 202
G A K G +H ++ G++ ++APE ++ DS DVY+FG++L EL++
Sbjct: 165 GLATEKSRWSG-SHQFEQLSGSILWMAPEVI---RMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 203 AKKPLEKL 210
+ P +
Sbjct: 221 GQLPYSNI 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 103
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 161
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 -RRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 220 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV + M N SL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 106 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 162
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 163 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV + M N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 42 QIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+A+K LK K +F E I+G+ H N++ L G +IV + M N SL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADF 150
+ L A ++ + V + G A G+ D+ A N+L++++ KV+DF
Sbjct: 135 SFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 151 GFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
G ++++ D + T K + + +PE + K + + DV+S+G++L E++S
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + L +L+
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSK-- 109
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 110 -FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 166
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 167 -RRXXLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 225 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 261
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E++IL + ++ RG Y G + L +V +Y+P+ L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 101 THLH---GRLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
L RL LL + ++ +GS + D+ A N+L++++ K+ADFG A
Sbjct: 102 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KL+P + R G + + APE S DV+SFGV+L EL +
Sbjct: 162 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E++IL + ++ RG Y G + L +V +Y+P+ L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 101 THLH---GRLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
L RL LL + ++ +GS + D+ A N+L++++ K+ADFG A
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
Query: 154 KLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KL+P + R G + + APE S DV+SFGV+L EL +
Sbjct: 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF-YAGGDERL-IVYDYMPNHSLI 100
+AVK+L+ + +F E++IL + ++ RG Y G + L +V +Y+P+ L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 101 THLH---GRLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
L RL LL + ++ +GS + D+ A N+L++++ K+ADFG A
Sbjct: 103 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
Query: 154 KLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KL+P + R G + + APE S DV+SFGV+L EL +
Sbjct: 163 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLY 91
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 92 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 149 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
Query: 207 LEKL 210
+
Sbjct: 209 YSNI 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 107
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH A + + + + IA +A G+ D+K++N+ L D K+ DF
Sbjct: 108 HHLH---ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 151 GFA--KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS------CDVYSFGVLLLELIS 202
G A K G +H ++ G++ ++APE ++ DS DVY+FG++L EL++
Sbjct: 165 GLATEKSRWSG-SHQFEQLSGSILWMAPEVI---RMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 203 AKKPLEKL 210
+ P +
Sbjct: 221 GQLPYSNI 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 118
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 119 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 175
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 176 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
Query: 207 LEKL 210
+
Sbjct: 236 YSNI 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 106
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+A+FG++ P
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--- 163
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-DI 218
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 164 RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 219 VQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 VEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 107
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL ++ E K+ADFG++ P
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-- 165
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
T + GTL YL PE + G++ D D++S GVL E + P E
Sbjct: 166 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+A+FG++ P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-- 164
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
T + GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 165 -RRTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 119
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 120 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 177 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Query: 207 LEKL 210
+
Sbjct: 237 YSNI 240
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 50 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 105
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 106 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 163
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 164 -RRXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 222 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 96
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 97 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 153
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 154 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
Query: 207 LEKL 210
+
Sbjct: 214 YSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 93
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 94 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 150
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 151 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
Query: 207 LEKL 210
+
Sbjct: 211 YSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 96
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 97 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 153
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 154 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
Query: 207 LEKL 210
+
Sbjct: 214 YSNI 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 91
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 92 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 151 GFAKLIPD-GVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKKP 206
G A + +H ++ G++ ++APE M K S DVY+FG++L EL++ + P
Sbjct: 149 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
Query: 207 LEKL 210
+
Sbjct: 209 YSNI 212
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK+ K +F E I+G+ H N++ L G +I+ ++M N SL +
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFEAKV 147
L D V +G GIA + A N+L++++ KV
Sbjct: 98 FLRQN-------DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKV 150
Query: 148 ADFGFAKLIPDGVTHMTTRV----KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
+DFG ++ + D + T K + + APE + K + + DV+S+G+++ E++S
Sbjct: 151 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 29/254 (11%)
Query: 41 DQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS- 98
+++A+KR+ + M E E++ + + H N++ + DE +V + S
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 99 --LITHLHGR-LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEA 145
+I H+ + +LD +I EG+ D+KA N+LL D
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV 155
Query: 146 KVADFGFAKLIPDGVTHMTTRVK----GTLGYLAPEYAMWGKVSD-SCDVYSFGVLLLEL 200
++ADFG + + G +V+ GT ++APE + D D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 201 ISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ P K P V +Q P ++ G + D + K+ + K + L C
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKYGKSFRKMISL----CL 267
Query: 260 DSNPENRPTMTDVV 273
+PE RPT +++
Sbjct: 268 QKDPEKRPTAAELL 281
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRG--FYAGGDERLIVYDYMPNHSLI 100
+AVK+L+ + +F E++IL + ++ RG + G E +V +Y+P+ L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 101 THLH---GRLAPDCLLDWHRRVSIA---IGSAEGIA-DIKASNVLLDTDFEAKVADFGFA 153
L RL LL + ++ +GS + D+ A N+L++++ K+ADFG A
Sbjct: 99 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
Query: 154 KLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KL+P R G + + APE S DV+SFGV+L EL +
Sbjct: 159 KLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 164
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 165 -RRXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 103
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 161
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 -RRXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 220 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 29/254 (11%)
Query: 41 DQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS- 98
+++A+KR+ + M E E++ + + H N++ + DE +V + S
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 99 --LITHLHGRLAPDC-LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEA 145
+I H+ + +LD +I EG+ D+KA N+LL D
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSV 160
Query: 146 KVADFGFAKLIPDGVTHMTTRVK----GTLGYLAPEYAMWGKVSD-SCDVYSFGVLLLEL 200
++ADFG + + G +V+ GT ++APE + D D++SFG+ +EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 201 ISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ P K P V +Q P ++ G + D + K+ + K + L C
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKYGKSFRKMISL----CL 272
Query: 260 DSNPENRPTMTDVV 273
+PE RPT +++
Sbjct: 273 QKDPEKRPTAAELL 286
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 74 LLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIG--SAEGI 129
L L + D V +Y+ L+ H+ GR + + ++I + ++GI
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 130 A--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD 186
D+K NV+LD++ K+ADFG K I DGVT T GT Y+APE +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGK 200
Query: 187 SCDVYSFGVLLLELISAKKPLE 208
S D ++FGVLL E+++ + P E
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 74 LLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIG--SAEGI 129
L L + D V +Y+ L+ H+ GR + + ++I + ++GI
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 130 A--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD 186
D+K NV+LD++ K+ADFG K I DGVT T GT Y+APE +
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGK 521
Query: 187 SCDVYSFGVLLLELISAKKPLE 208
S D ++FGVLL E+++ + P E
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP----LGTVYRELQKLS 103
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 161
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 -RRAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 220 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 49 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 104
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 105 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 163 -RRDTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 221 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 48 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 103
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 161
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 162 -RRAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 220 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 164
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 165 -RRAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 65 ILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH-GRLAPDCLLDWHR-RVSIA 122
+L V H ++ + G + + ++ DY+ L + L + P+ + ++ V +A
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 123 IGSAEG----IADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEY 178
+ D+K N+LLD + K+ DFGFAK +PD +T + GT Y+APE
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEV 174
Query: 179 AMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+ S D +SFG+L+ E+++ P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 53 AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCL 112
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 75 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSK 130
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A ++ DIK N+LL + E K+ADFG++ P +
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SS 187
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE + G++ D D++S GVL E + K P E
Sbjct: 188 RRDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 111
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 112 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 168
Query: 151 GFA--KLIPDGVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKK 205
G A K G +H ++ G++ ++APE M K S DVY+FG++L EL++ +
Sbjct: 169 GLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
Query: 206 PLEKL 210
P +
Sbjct: 228 PYSNI 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 91
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 92 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 151 GFA--KLIPDGVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKK 205
G A K G +H ++ G++ ++APE M K S DVY+FG++L EL++ +
Sbjct: 149 GLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 206 PLEKL 210
P +
Sbjct: 208 PYSNI 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 43 IAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK L + F EV +L + RH N+L G Y+ + IV + SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLY 119
Query: 101 THLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKVADF 150
HLH + + + + IA +A+G+ D+K++N+ L D K+ DF
Sbjct: 120 HHLH---IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 151 GFA--KLIPDGVTHMTTRVKGTLGYLAPEYA-MWGK--VSDSCDVYSFGVLLLELISAKK 205
G A K G +H ++ G++ ++APE M K S DVY+FG++L EL++ +
Sbjct: 177 GLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 206 PLEKL 210
P +
Sbjct: 236 PYSNI 240
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G IV +YMP +L+ +
Sbjct: 60 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 103 LHG----RLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + S DV++FGVLL E+ +
Sbjct: 179 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 51 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 106
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL + E K+ADFG++ P +
Sbjct: 107 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---S 163
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE--KLPGGVKR-D 217
+ GTL YL PE + G++ D D++S GVL E + K P E KR
Sbjct: 164 SRRDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 218 IVQWVTP-YVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD 274
V++ P +V +GA + I+ R NP RP + +V++
Sbjct: 223 RVEFTFPDFVTEGARDLIS---------------------RLLKHNPSQRPMLREVLE 259
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 49/270 (18%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK A +F E E+L ++H +++ G GD ++V++YM + L
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 103 LHGRLAPDCL-------------LDWHRRVSIAIGSAEGIA----------DIKASNVLL 139
L PD + L + + IA A G+ D+ N L+
Sbjct: 108 LRAH-GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 166
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKG----TLGYLAPEYAMWGKVSDSCDVYSFGV 195
+ K+ DFG ++ D + RV G + ++ PE M+ K + DV+SFGV
Sbjct: 167 GANLLVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 196 LLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
+L E+ + K+P +L ++++ +T Q E PR+ K D +
Sbjct: 224 ILWEIFTYGKQPWFQLS---NTEVIECIT---QGRVLER---PRVCPKEVYD-------V 267
Query: 255 ALRCTDSNPENRPTMTDVVDWLKGGLGRRT 284
L C P+ R + ++ L LG+ T
Sbjct: 268 MLGCWQREPQQRLNIKEIYKILH-ALGKAT 296
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 41 DQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYA--GGDERLIVYDYMPNH 97
+Q+AVK LK + + + E+EIL + H N++ +G GG+ ++ +++P+
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKV 147
SL +L ++ +++ A+ +G+ D+ A NVL++++ + K+
Sbjct: 99 SLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI 155
Query: 148 ADFGFAKLIPDGVTHMTTR--VKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG K I T + + + APE M K + DV+SFGV L EL++
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 165 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 224 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 252
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 41 DQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYA--GGDERLIVYDYMPNH 97
+Q+AVK LK + + + E+EIL + H N++ +G GG+ ++ +++P+
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----------ADIKASNVLLDTDFEAKV 147
SL +L ++ +++ A+ +G+ D+ A NVL++++ + K+
Sbjct: 111 SLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI 167
Query: 148 ADFGFAKLIPDGVTHMTTR--VKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG K I T + + + APE M K + DV+SFGV L EL++
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 175
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 176 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 235 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 263
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 168
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 169 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 228 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK + EF E I+G+ H N++ L G +I+ ++M N +L +
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFEAKV 147
L L D V +G GIA D+ A N+L++++ KV
Sbjct: 107 FLR-------LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV 159
Query: 148 ADFGFAKLIPDGVTHMTTRV----KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
+DFG ++ + + + T K + + APE + K + + D +S+G+++ E++S
Sbjct: 160 SDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 174 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 233 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 162 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 219 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 278 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 306
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 52 NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDC 111
A E + EVEI +RH N+L L G++ ++ +Y P + ++ L
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLS 107
Query: 112 LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVT 161
D R + A ++ DIK N+LL ++ E K+ADFG++ P
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-- 165
Query: 162 HMTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE + G++ D D++S GVL E + P E
Sbjct: 166 -RRDTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 43 IAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K LK + EF E I+G+ H N++ L G +I+ ++M N +L +
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSAEGIA--------------DIKASNVLLDTDFEAKV 147
L L D V +G GIA D+ A N+L++++ KV
Sbjct: 105 FLR-------LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKV 157
Query: 148 ADFGFAKLIPDGVTH--MTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
+DFG ++ + + + T+ + G + + APE + K + + D +S+G+++ E++S
Sbjct: 158 SDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--- 99
+AVK++ + EV I+ +H N++ + Y GDE +V +++ +L
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAK 154
+TH ++A CL ++++ A+G+ DIK+ ++LL D K++DFGF
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQ---ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGV 214
+ V V GT ++APE D++S G++++E++ + P P
Sbjct: 296 QVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354
Query: 215 KRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
+++ P K H P LKG +R
Sbjct: 355 AMKMIRDNLPPRLKNL--HKVSPSLKGFLDR 383
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + A +F E E+L ++H +++ G GD ++V++YM + L
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 103 L--HGRLA-------PDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
L HG A P L + + IA A G+ D+ N L+ +
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKG----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG ++ D + RV G + ++ PE M+ K + DV+S GV+L E
Sbjct: 166 LVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 200 LIS-AKKPLEKL 210
+ + K+P +L
Sbjct: 223 IFTYGKQPWYQL 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 39/261 (14%)
Query: 41 DQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFY--AGGDERLIVYDYMPNH 97
+ +AVK LK + + E++IL + H +++ +G AG +V +Y+P
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
SL +L P + + + A EG+A D+ A NVLLD D K+
Sbjct: 121 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKI 175
Query: 148 ADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI---- 201
DFG AK +P+G R G + + APE K + DV+SFGV L EL+
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 235
Query: 202 SAKKP----LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR 257
S++ P LE + + V +T +++G E + P D+ + V ++
Sbjct: 236 SSQSPPTKFLELIGIAQGQMTVLRLTELLERG--ERLPRP--------DKCPAEVYHLMK 285
Query: 258 -CTDSNPENRPTMTDVVDWLK 277
C ++ RPT +++ LK
Sbjct: 286 NCWETEASFRPTFENLIPILK 306
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 158 LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 158 LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 47/267 (17%)
Query: 39 GDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNH 97
+ ++AVK + ++ + + +EF E ++ +++ L G + G L+V + M +
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 98 SLITHLH----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNV 137
L ++L GR P + +A A+G+A D+ A N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGV 195
++ DF K+ DFG + I + + KG L ++APE G + S D++SFGV
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 196 LLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
+L E+ S A++P + L + V +V G + + P D V
Sbjct: 221 VLWEITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTD 263
Query: 255 ALR-CTDSNPENRPTMTDVVDWLKGGL 280
+R C NP+ RPT ++V+ LK L
Sbjct: 264 LMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 41 DQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLI--VYDYMPNH 97
+ +AVK LK + + E+EIL + H +++ +G E+ + V +Y+P
Sbjct: 39 EMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 98
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIADIKAS----------NVLLDTDFEAKV 147
SL +L P + + + A EG+A + A NVLLD D K+
Sbjct: 99 SLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI 153
Query: 148 ADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG AK +P+G + R G + + APE K + DV+SFGV L EL++
Sbjct: 154 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 41 DQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLI--VYDYMPNH 97
+ +AVK LK + + E+EIL + H +++ +G E+ + V +Y+P
Sbjct: 38 EMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 97
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIADIKAS----------NVLLDTDFEAKV 147
SL +L P + + + A EG+A + A NVLLD D K+
Sbjct: 98 SLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI 152
Query: 148 ADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG AK +P+G + R G + + APE K + DV+SFGV L EL++
Sbjct: 153 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+LLD +++D G A +P+G T + RV GT+GY+APE + + S D
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDW 368
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQ 220
++ G LL E+I+ + P ++ +KR+ V+
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+LLD +++D G A +P+G T + RV GT+GY+APE + + S D
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDW 368
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQ 220
++ G LL E+I+ + P ++ +KR+ V+
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 50/261 (19%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A + EF E ++ +++ L G + G L+V + M + L ++L
Sbjct: 51 VKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 110
Query: 104 H----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
GR P + +A A+G+A D+ A N ++ DF
Sbjct: 111 RSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 166
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
K+ DFG + I + + KG L ++APE G + S D++SFGV+L E+
Sbjct: 167 TVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 202 S-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CT 259
S A++P + L + V +V G + + P D V +R C
Sbjct: 226 SLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTDLMRMCW 268
Query: 260 DSNPENRPTMTDVVDWLKGGL 280
NP+ RPT ++V+ LK L
Sbjct: 269 QFNPKMRPTFLEIVNLLKDDL 289
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 47/267 (17%)
Query: 39 GDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNH 97
+ ++AVK + ++ + + +EF E ++ +++ L G + G L+V + M +
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 98 SLITHLH----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNV 137
L ++L GR P + +A A+G+A D+ A N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGV 195
++ DF K+ DFG + I + + KG L ++APE G + S D++SFGV
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 196 LLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
+L E+ S A++P + L + V +V G + + P D V
Sbjct: 221 VLWEITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTD 263
Query: 255 ALR-CTDSNPENRPTMTDVVDWLKGGL 280
+R C NP+ RPT ++V+ LK L
Sbjct: 264 LMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 158 LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K +N+++ KV DFG A+ I D VT T V GT YL+PE A V
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQARGDSVDAR 199
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DVYS G +L E+++ + P G D V A++H+ + + +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFT----GDSPDSV----------AYQHVREDPIPPSARHEG 245
Query: 248 LKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A + EF E ++ +++ L G + G L+V + M + L ++L
Sbjct: 52 VKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Query: 104 H----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
GR P + +A A+G+A D+ A N ++ DF
Sbjct: 112 RSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 167
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFGVLLL 198
K+ DFG + + KG G ++APE G + S D++SFGV+L
Sbjct: 168 TVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 199 ELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR 257
E+ S A++P + L + V +V G + + P D V +R
Sbjct: 224 EITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTDLMR 266
Query: 258 -CTDSNPENRPTMTDVVDWLKGGL 280
C NP+ RPT ++V+ LK L
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 161 LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 161 LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A + EF E ++ +++ L G + G L+V + M + L ++L
Sbjct: 49 VKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
Query: 104 H----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
GR P + +A A+G+A D+ A N ++ DF
Sbjct: 109 RSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 164
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFGVLLL 198
K+ DFG + + KG G ++APE G + S D++SFGV+L
Sbjct: 165 TVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 220
Query: 199 ELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR 257
E+ S A++P + L + V +V G + + P D V +R
Sbjct: 221 EITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTDLMR 263
Query: 258 -CTDSNPENRPTMTDVVDWLKGGL 280
C NP+ RPT ++V+ LK L
Sbjct: 264 MCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 165 LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 162 LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 45 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 104 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 163
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 164 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 53/270 (19%)
Query: 39 GDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNH 97
+ ++AVK + ++ + + +EF E ++ +++ L G + G L+V + M +
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 98 SLITHLH----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNV 137
L ++L GR P + +A A+G+A D+ A N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYS 192
++ DF K+ DFG + + KG G ++APE G + S D++S
Sbjct: 162 MVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWS 217
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGV+L E+ S A++P + L + V +V G + + P D
Sbjct: 218 FGVVLWEITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPER 260
Query: 252 VLIALR-CTDSNPENRPTMTDVVDWLKGGL 280
V +R C NP RPT ++V+ LK L
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 41 DQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPNH 97
+ +AVK LK + + E++IL + H +++ +G E+ +V +Y+P
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
SL +L P + + + A EG+A ++ A NVLLD D K+
Sbjct: 104 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKI 158
Query: 148 ADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG AK +P+G + R G + + APE K + DV+SFGV L EL++
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 41 DQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER--LIVYDYMPNH 97
+ +AVK LK + + E++IL + H +++ +G E+ +V +Y+P
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
SL +L P + + + A EG+A ++ A NVLLD D K+
Sbjct: 104 SLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKI 158
Query: 148 ADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
DFG AK +P+G + R G + + APE K + DV+SFGV L EL++
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 54 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 113 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 172
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 173 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 162 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E D+ A N L+ + KVADFG ++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 162 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG--VTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+K +N+L+ KV DFG A+ I D T V GT YL+PE A V
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 189 DVYSFGVLLLELISAKKPLE-KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DVYS G +L E+++ + P P V A++H+ + + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSV---------------AYQHVREDPIPPSARHEG 245
Query: 248 LKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 37 ETGDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
ET +A+K L +T KA +EF E I+ + H +L+ L G +L+ MP
Sbjct: 41 ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMP 99
Query: 96 NHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVA 148
+ L+ ++H + LL+W +++ + E D+ A NVL+ + K+
Sbjct: 100 HGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT 159
Query: 149 DFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKP 206
DFG A+L+ D + K + ++A E + K + DV+S+GV + EL++ KP
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
Query: 207 LEKLPGGVKRDIVQ 220
+ +P D+++
Sbjct: 220 YDGIPTREIPDLLE 233
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 37 ETGDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
ET +A+K L +T KA +EF E I+ + H +L+ L G +L+ MP
Sbjct: 64 ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMP 122
Query: 96 NHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVA 148
+ L+ ++H + LL+W +++ + E D+ A NVL+ + K+
Sbjct: 123 HGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT 182
Query: 149 DFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKP 206
DFG A+L+ D + K + ++A E + K + DV+S+GV + EL++ KP
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
Query: 207 LEKLP 211
+ +P
Sbjct: 243 YDGIP 247
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 47/242 (19%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
++AVK +K + E F E ++ ++H L+ L + I+ ++M SL+
Sbjct: 208 KVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLD 265
Query: 102 HL---HGRLAP-DCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
L G P L+D+ ++ AEG+A D++A+N+L+ K+
Sbjct: 266 FLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQRNYIHRDLRAANILVSASLVCKI 319
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
ADFG A++ K + + APE +G + DV+SFG+LL+E+++ +
Sbjct: 320 ADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI- 368
Query: 208 EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRP 267
PG ++++ +++G R+ N + + I +RC + PE RP
Sbjct: 369 -PYPGMSNPEVIR----ALERGY-------RMPRPENCPE--ELYNIMMRCWKNRPEERP 414
Query: 268 TM 269
T
Sbjct: 415 TF 416
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
+ TG Q+AVK++ + EV I+ H N++ + Y GDE +V +++
Sbjct: 67 KHTGK-QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLE 125
Query: 96 NHSL---ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVAD 149
+L +TH ++A CL R +S DIK+ ++LL +D K++D
Sbjct: 126 GGALTDIVTHTRMNEEQIATVCL-SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSD 184
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FGF + V V GT ++APE D++S G++++E+I + P
Sbjct: 185 FGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 47/267 (17%)
Query: 39 GDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNH 97
+ ++AVK + ++ + + +EF E ++ +++ L G + G L+V + M +
Sbjct: 47 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 98 SLITHLH----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNV 137
L ++L GR P + +A A+G+A ++ A N
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRNLAARNC 162
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGV 195
++ DF K+ DFG + I + + KG L ++APE G + S D++SFGV
Sbjct: 163 MVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 221
Query: 196 LLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
+L E+ S A++P + L + V +V G + + P D V
Sbjct: 222 VLWEITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTD 264
Query: 255 ALR-CTDSNPENRPTMTDVVDWLKGGL 280
+R C NP RPT ++V+ LK L
Sbjct: 265 LMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 47/267 (17%)
Query: 39 GDDQIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNH 97
+ ++AVK + ++ + + +EF E ++ +++ L G + G L+V + M +
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 98 SLITHLH----------GRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNV 137
L ++L GR P + +A A+G+A ++ A N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL----QEMIQMAAEIADGMAYLNAKKFVHRNLAARNC 161
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGV 195
++ DF K+ DFG + I + + KG L ++APE G + S D++SFGV
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 196 LLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
+L E+ S A++P + L + V +V G + + P D V
Sbjct: 221 VLWEITSLAEQPYQGLSN-------EQVLKFVMDGGY--LDQP--------DNCPERVTD 263
Query: 255 ALR-CTDSNPENRPTMTDVVDWLKGGL 280
+R C NP RPT ++V+ LK L
Sbjct: 264 LMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 248 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L ++ LL ++S A+ E ++ A N L+ + KVADFG ++
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 366
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K +N+++ KV DFG A+ I D VT T V GT YL+PE A V
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQARGDSVDAR 216
Query: 188 CDVYSFGVLLLELISAKKPLE-KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DVYS G +L E+++ + P P V A++H+ + + +
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSV---------------AYQHVREDPIPPSARHE 261
Query: 247 QLKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 262 GLSADLDAVVLKALAKNPENR 282
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 35 RRETGDDQIAVKRLKTL-------NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER 87
R+ TG + + +K L NAK E IL V+H ++ L + G +
Sbjct: 37 RKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96
Query: 88 LIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIGS--AEGIA--DIKASNVLLDT 141
++ +Y+ L L G D + +S+A+G +GI D+K N++L+
Sbjct: 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH 156
Query: 142 DFEAKVADFGFAK-LIPDG-VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG K I DG VTH GT+ Y+APE M + + D +S G L+ +
Sbjct: 157 QGHVKLTDFGLCKESIHDGTVTHXFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 200 LISAKKPL 207
+++ P
Sbjct: 214 MLTGAPPF 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 59 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 119 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 236 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 280
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 281 PSFSELVS 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 74 LLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIG--SAEGI 129
L L + D V +Y+ L+ H+ G+ + + +SI + GI
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 130 A--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD 186
D+K NV+LD++ K+ADFG K + DGVT T GT Y+APE +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPEIIAYQPYGK 199
Query: 187 SCDVYSFGVLLLELISAKKPLE 208
S D +++GVLL E+++ + P +
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 60 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 120 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 237 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 281
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 282 PSFSELVS 289
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 35 RRETGDDQIAVKRLKTL-------NAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER 87
R+ TG + + +K L NAK E IL V+H ++ L + G +
Sbjct: 37 RKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96
Query: 88 LIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIGS--AEGIA--DIKASNVLLDT 141
++ +Y+ L L G D + +S+A+G +GI D+K N++L+
Sbjct: 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH 156
Query: 142 DFEAKVADFGFAK-LIPDG-VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG K I DG VTH GT+ Y+APE M + + D +S G L+ +
Sbjct: 157 QGHVKLTDFGLCKESIHDGTVTHTFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 200 LISAKKPL 207
+++ P
Sbjct: 214 MLTGAPPF 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K +N+++ KV DFG A+ I D VT T V GT YL+PE A V
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQARGDSVDAR 199
Query: 188 CDVYSFGVLLLELISAKKPLE-KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DVYS G +L E+++ + P P V A++H+ + + +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSV---------------AYQHVREDPIPPSARHE 244
Query: 247 QLKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 54/260 (20%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 45 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 105 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 161
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG + + KG G +++PE G + DV+SFGV+L E
Sbjct: 162 VKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 217
Query: 200 LIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR- 257
+ + A++P + L + V +V +G + P D M+L +R
Sbjct: 218 IATLAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLLELMRM 260
Query: 258 CTDSNPENRPTMTDVVDWLK 277
C NP+ RP+ +++ +K
Sbjct: 261 CWQYNPKMRPSFLEIISSIK 280
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 58 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 118 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 235 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 279
Query: 267 PTMTDVV 273
P+ +++V
Sbjct: 280 PSFSELV 286
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K +N+++ KV DFG A+ I D VT T V GT YL+PE A V
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQARGDSVDAR 199
Query: 188 CDVYSFGVLLLELISAKKPLE-KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DVYS G +L E+++ + P P V A++H+ + + +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSV---------------AYQHVREDPIPPSARHE 244
Query: 247 QLKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 59 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 119 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 236 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 280
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 281 PSFSELVS 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 78 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 137
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 138 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 255 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 299
Query: 267 PTMTDVV 273
P+ +++V
Sbjct: 300 PSFSELV 306
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 60 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 120 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 237 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 281
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 282 PSFSELVS 289
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K +N+++ KV DFG A+ I D VT T V GT YL+PE A V
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQARGDSVDAR 199
Query: 188 CDVYSFGVLLLELISAKKPLE-KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DVYS G +L E+++ + P P V A++H+ + + +
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSV---------------AYQHVREDPIPPSARHE 244
Query: 247 QLKS-MVLIALRCTDSNPENR 266
L + + + L+ NPENR
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 60 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 120 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 237 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 281
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 282 PSFSELVS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 52 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 111
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 112 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 229 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 273
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 274 PSFSELVS 281
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 61 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 121 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 238 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 282
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 283 PSFSELVS 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 61 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 121 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 238 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 282
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 283 PSFSELVS 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 55 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 114
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 115 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 232 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 276
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 277 PSFSELVS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 79 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 138
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 139 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 256 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 300
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 301 PSFSELVS 308
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 65 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 124
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 125 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 242 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 286
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 287 PSFSELVS 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 58 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 118 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 235 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 279
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 280 PSFSELVS 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 60 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 120 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 237 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 281
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 282 PSFSELVS 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 57 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 116
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 117 RNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 150 FGFAKLIPDG---VTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 234 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 278
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 279 PSFSELVS 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 33/248 (13%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGD-ERLIVYDYMPNHSL 99
AVK L + E+ +F E I+ H N+L L G + L+V YM + L
Sbjct: 119 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 178
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVAD 149
+ + D + + A+G+ D+ A N +LD F KVAD
Sbjct: 179 RNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 150 FGFAKLIPD---GVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FG A+ + D H T K + ++A E K + DV+SFGVLL EL++ P
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
Query: 207 LEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENR 266
P DI ++ + E+ DP + + L+C E R
Sbjct: 296 --PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------------VMLKCWHPKAEMR 340
Query: 267 PTMTDVVD 274
P+ +++V
Sbjct: 341 PSFSELVS 348
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 47 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 107 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 163
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 164 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 223 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 265
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 266 YNPKMRPSFLEIISSIK 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 82 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 142 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 198
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 199 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 258 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 300
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 301 YNPKMRPSFLEIISSIK 317
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 51 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 111 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 167
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 168 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 227 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 269
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 270 YNPKMRPSFLEIISSIK 286
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 245 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E ++ A N L+ + KVADFG ++
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 364 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + E EF E ++ ++H NL+ L G I+ ++M +L+ +
Sbjct: 287 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 103 LH----GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L + LL ++S A+ E ++ A N L+ + KVADFG ++
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
L+ K + + APE + K S DV++FGVLL E+ +
Sbjct: 406 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 47 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N + DF
Sbjct: 107 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFT 163
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 164 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+L +R C
Sbjct: 223 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLLELMRMCWQ 265
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 266 YNPKMRPSFLEIISSIK 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 53 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 113 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 169
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 170 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 229 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 271
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 272 YNPKMRPSFLEIISSIK 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 53 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 113 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 169
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 170 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 229 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 271
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 272 YNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 54 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 114 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 170
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 171 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 230 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 272
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 273 YNPKMRPSFLEIISSIK 289
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 50 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 110 RSLRPAMANNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 166
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 167 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 226 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 268
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 269 YNPKMRPSFLEIISSIK 285
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 54/260 (20%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 54 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 114 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 170
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG + + KG G +++PE G + DV+SFGV+L E
Sbjct: 171 VKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 200 LIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR- 257
+ + A++P + L + V +V +G + P D M+ +R
Sbjct: 227 IATLAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRM 269
Query: 258 CTDSNPENRPTMTDVVDWLK 277
C NP+ RP+ +++ +K
Sbjct: 270 CWQYNPKMRPSFLEIISSIK 289
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 120 RSLRPEMENNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 176
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 177 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 236 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 278
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 279 YNPKMRPSFLEIISSIK 295
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 48 LKTLNAKAEM----EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KT+N A M EF E ++ +++ L G + G L++ + M L ++L
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 104 HGR---------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFE 144
LAP L + + +A A+G+A D+ A N ++ DF
Sbjct: 120 RSLRPAMANNPVLAPPSL---SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 176
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKGTLG--YLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
K+ DFG + I + + KG L +++PE G + DV+SFGV+L E+ +
Sbjct: 177 VKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Query: 203 -AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALR-CTD 260
A++P + L + V +V +G + P D M+ +R C
Sbjct: 236 LAEQPYQGLSN-------EQVLRFVMEGGL--LDKP--------DNCPDMLFELMRMCWQ 278
Query: 261 SNPENRPTMTDVVDWLK 277
NP+ RP+ +++ +K
Sbjct: 279 YNPKMRPSFLEIISSIK 295
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+K N+LLD D K+ADFG K ++ D T+ GT Y+APE + K + S
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GTPDYIAPEILLGQKYNHSV 199
Query: 189 DVYSFGVLLLELISAKKPL 207
D +SFGVLL E++ + P
Sbjct: 200 DWWSFGVLLYEMLIGQSPF 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+K N+LLD D K+ADFG K ++ D T GT Y+APE + K + S
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDA---KTNEFCGTPDYIAPEILLGQKYNHSV 200
Query: 189 DVYSFGVLLLELISAKKPL 207
D +SFGVLL E++ + P
Sbjct: 201 DWWSFGVLLYEMLIGQSPF 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK + LN+ + + EV I+ + H N++ L +V +Y +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G + G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 161 NEFTFG--NKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK + LN+ + + EV I+ + H N++ L +V +Y +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G + G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 161 NEFTFG--NKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLA 108
LN+ + + EV I+ + H N++ L +V +Y + +L HGR+
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 109 PDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMT 164
R++ A+ D+KA N+LLD D K+ADFGF+ G +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL 169
Query: 165 TRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 170 DEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +YMP + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D KVADFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +YMP + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D KVADFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
R TG++ A K + T + + E++ + +RH L+ L + +E +++Y++M
Sbjct: 73 RATGNN-FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 131
Query: 96 NHSLITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDT--DFEAK 146
L + H +++ D +++ R+V + D+K N++ T E K
Sbjct: 132 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 191
Query: 147 VADFGF-AKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKK 205
+ DFG A L P +TT GT + APE A V D++S GVL L+S
Sbjct: 192 LIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 248
Query: 206 PL 207
P
Sbjct: 249 PF 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 25/192 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + A +F E E+L ++H++++ G G L+V++YM + L
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 103 L--HGR----------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLD 140
L HG +AP L + +++A A G+ D+ N L+
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGP-LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 192
Query: 141 TDFEAKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG ++ + + R + ++ PE ++ K + DV+SFGV+L E
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252
Query: 200 LIS-AKKPLEKL 210
+ + K+P +L
Sbjct: 253 IFTYGKQPWYQL 264
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + A +F E E+L ++H++++ G G L+V++YM + L
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 103 LHGRLAPDC------------LLDWHRRVSIAIGSAEGIA----------DIKASNVLLD 140
L PD L + +++A A G+ D+ N L+
Sbjct: 111 LRSH-GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 169
Query: 141 TDFEAKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG ++ + + R + ++ PE ++ K + DV+SFGV+L E
Sbjct: 170 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 229
Query: 200 LIS-AKKPLEKL 210
+ + K+P +L
Sbjct: 230 IFTYGKQPWYQL 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLA 108
LN+ + + EV I+ + H N++ L +V +Y + +L HGR+
Sbjct: 52 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 109 PDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMT 164
R++ A+ D+KA N+LLD D K+ADFGF+ G +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL 169
Query: 165 TRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 170 DTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 25/192 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
+AVK LK + A +F E E+L ++H++++ G G L+V++YM + L
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 103 L--HGR----------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLD 140
L HG +AP L + +++A A G+ D+ N L+
Sbjct: 105 LRSHGPDAKLLAGGEDVAPG-PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 163
Query: 141 TDFEAKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
K+ DFG ++ + + R + ++ PE ++ K + DV+SFGV+L E
Sbjct: 164 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 223
Query: 200 LIS-AKKPLEKL 210
+ + K+P +L
Sbjct: 224 IFTYGKQPWYQL 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+IA+K + +++ E+ + ++H+N++ G ++ I + +P SL
Sbjct: 49 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 108
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSA-EGIA----------DIKASNVLLDT-DFEAKVAD 149
L + P L D + + EG+ DIK NVL++T K++D
Sbjct: 109 LLRSKWGP--LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 166
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK--VSDSCDVYSFGVLLLELISAKKPL 207
FG +K + G+ T GTL Y+APE G + D++S G ++E+ + K P
Sbjct: 167 FGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
Query: 208 EKL 210
+L
Sbjct: 226 YEL 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL- 99
++A++++ L + + E + E+ ++ ++ N++ Y GDE +V +Y+ SL
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 100 --ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAK 154
+T G++A C + + + + DIK+ N+LL D K+ DFGF
Sbjct: 106 DVVTETCMDEGQIAAVCR-ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
I + +T V GT ++APE D++S G++ +E+I + P
Sbjct: 165 QITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
R TG++ A K + T + + E++ + +RH L+ L + +E +++Y++M
Sbjct: 178 ERATGNN-FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236
Query: 95 PNHSLITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDT--DFEA 145
L + H +++ D +++ R+V + D+K N++ T E
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296
Query: 146 KVADFGF-AKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ DFG A L P +TT GT + APE A V D++S GVL L+S
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
Query: 205 KPL 207
P
Sbjct: 354 SPF 356
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK + LN+ + + EV I+ + H N++ L +V +Y +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G + G Y APE GK D DV+S GV+L L+S P +
Sbjct: 161 NEFTFG--NKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+IA+K + +++ E+ + ++H+N++ G ++ I + +P SL
Sbjct: 35 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 94
Query: 102 HLHGRLAPDCLLDWHRRVSIAIGSA-EGIA----------DIKASNVLLDT-DFEAKVAD 149
L + P L D + + EG+ DIK NVL++T K++D
Sbjct: 95 LLRSKWGP--LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISD 152
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK--VSDSCDVYSFGVLLLELISAKKPL 207
FG +K + G+ T GTL Y+APE G + D++S G ++E+ + K P
Sbjct: 153 FGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Query: 208 EKL 210
+L
Sbjct: 212 YEL 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ R + M + L+
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYLV 124
Query: 101 THLHG----------RLAPD--CLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAK 146
THL G L+ D C + R I SA + D+K SN+LL+T + K
Sbjct: 125 THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 184
Query: 147 VADFGFAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISA 203
+ DFG A++ PD T T T Y APE + K + S D++S G +L E++S
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 204 K 204
+
Sbjct: 245 R 245
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 65 ILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIA-I 123
+L V+H L+GL + D+ V DY+ L HL C L+ R A I
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEI 148
Query: 124 GSAEGIA--------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH--MTTRVKGTLGY 173
SA G D+K N+LLD+ + DFG K + + H T+ GT Y
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEY 205
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
LAPE + D + G +L E++ P
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 36 RETGDDQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGF------YAGGDERL 88
++TG+ Q+A+K+ + L+ K + +E++I+ ++ H N++ R A D L
Sbjct: 37 QDTGE-QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 95
Query: 89 IVYDYMPNHSLITHLHGRLAPDCLLDWH--RRVSIAIGSAEGIA--------DIKASNVL 138
+ +Y L +L+ + C L R + I SA D+K N++
Sbjct: 96 LAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 154
Query: 139 LDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGV 195
L + K+ D G+AK + G + T GTL YLAPE K + + D +SFG
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 212
Query: 196 LLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIA 235
L E I+ +P LP VQW V++ + EHI
Sbjct: 213 LAFECITGFRPF--LPNW---QPVQW-HGKVREKSNEHIV 246
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 36 RETGDDQIAVKRLKT-LNAKAEMEFAVEVEILGRVRHRNLLGLRGF------YAGGDERL 88
++TG+ Q+A+K+ + L+ K + +E++I+ ++ H N++ R A D L
Sbjct: 36 QDTGE-QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94
Query: 89 IVYDYMPNHSLITHLHGRLAPDCLLDWH--RRVSIAIGSAEGIA--------DIKASNVL 138
+ +Y L +L+ + C L R + I SA D+K N++
Sbjct: 95 LAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 153
Query: 139 LDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGV 195
L + K+ D G+AK + G + T GTL YLAPE K + + D +SFG
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 211
Query: 196 LLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIA 235
L E I+ +P LP VQW V++ + EHI
Sbjct: 212 LAFECITGFRPF--LPNW---QPVQW-HGKVREKSNEHIV 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK + LN + + EV I+ + H N++ L +V +Y +
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 102 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G + G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 162 NEFTVG--NKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRV- 119
E+E L +RH+++ L ++ +V +Y P L ++ ++ D L + RV
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVV 113
Query: 120 ------SIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGF-AKLIPDGVTHMTTRVKGT 170
++A ++G A D+K N+L D + K+ DFG AK + H+ T G+
Sbjct: 114 FRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGS 172
Query: 171 LGYLAPEYAMWGK--VSDSCDVYSFGVLLLELISAKKPLE---------KLPGGVKRDIV 219
L Y APE + GK + DV+S G+LL L+ P + K+ G K D+
Sbjct: 173 LAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-KYDVP 230
Query: 220 QWVTP 224
+W++P
Sbjct: 231 KWLSP 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---LAPDCLLD 114
+ ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARY 121
Query: 115 WHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKG 169
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG T + G
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCG 179
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T Y+APE S DV+S G ++ L+ K P E
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---LAPDCLLD 114
+ ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARY 121
Query: 115 WHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKG 169
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG T + G
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCG 179
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T Y+APE S DV+S G ++ L+ K P E
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 100 ITHLHGRLAPDC------LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
+ L + D L+ + + A+G+A D+ A NVLL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 197
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ I + ++ VKG + ++APE + DV+S+G+LL E
Sbjct: 198 VAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S L PG + + V+ G +A P K++ I C
Sbjct: 255 IFSLG--LNPYPGIL---VNSKFYKLVKDGY--QMAQPAFAP-------KNIYSIMQACW 300
Query: 260 DSNPENRPTMTDVVDWLK 277
P +RPT + +L+
Sbjct: 301 ALEPTHRPTFQQICSFLQ 318
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 29/194 (14%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLI------------ 89
++AV +LK + M+ + E+L R R GD + I
Sbjct: 89 EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN 148
Query: 90 ---VYDYMPNHSLITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
V DY L+T L RL + + + IAI S + DIK N+L+
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208
Query: 140 DTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPE--YAMW---GKVSDSCDVYSF 193
D + ++ADFG KL+ DG + V GT Y++PE AM G+ CD +S
Sbjct: 209 DMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSL 267
Query: 194 GVLLLELISAKKPL 207
GV + E++ + P
Sbjct: 268 GVCMYEMLYGETPF 281
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
R + Q+AVK + + EV I+ +H N++ + Y G+E ++ +++
Sbjct: 65 REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124
Query: 95 PNHSLITHLHG-RLAPDCLLDWHRRV--SIAIGSAEGIA--DIKASNVLLDTDFEAKVAD 149
+L + RL + + V ++A A+G+ DIK+ ++LL D K++D
Sbjct: 125 QGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
FGF I V V GT ++APE + D++S G++++E++ + P
Sbjct: 185 FGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D KVADFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 43 IAVKRLKT---LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+A+K+++ ++AKA + E+++L ++ H N++ + +E IV + L
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 100 ---ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGIA------DIKASNVLLDTDFEAKVA 148
I H RL P+ + W V + + DIK +NV + K+
Sbjct: 120 SRMIKHFKKQKRLIPERTV-WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG 178
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
D G + T + V GT Y++PE + D++S G LL E+ + + P
Sbjct: 179 DLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
Query: 209 KLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPT 268
G K ++ Y E P L ++L+ +V + C + +PE RP
Sbjct: 238 ----GDKMNL------YSLCKKIEQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPD 284
Query: 269 MTDVVDWLK 277
+T V D K
Sbjct: 285 VTYVYDVAK 293
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---LAPDCLLD 114
+ ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARY 125
Query: 115 WHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKG 169
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG T + G
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCG 183
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T Y+APE S DV+S G ++ L+ K P E
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+AVK + TL + +F E IL + H N++ L G IV + + +T
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L RL LL + + E D+ A N L+ K++DFG ++
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 155 LIPDGVTHMTTRVKGT-LGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKLPG 212
DGV + ++ + + APE +G+ S DV+SFG+LL E S P L
Sbjct: 262 EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 213 GVKRDIVQ 220
R+ V+
Sbjct: 322 QQTREFVE 329
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 39/198 (19%)
Query: 43 IAVKRLKTLNAKAEMEFAV----EVEILGRVRHRNLLGLRGF-----YAGGDERLIVYDY 93
+A+K+++ + FA+ E++IL +H N++ + + +E I+ +
Sbjct: 39 VAIKKIEPFDKPL---FALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95
Query: 94 MPNHSLITHLHGRLAPDCLLDWH---------RRVSIAIGSAEGIADIKASNVLLDTDFE 144
M T LH ++ L D H R V + GS D+K SN+L++++ +
Sbjct: 96 MQ-----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 145 AKVADFGFAKLI---------PDGVTHMTTRVKGTLGYLAPEYAMW-GKVSDSCDVYSFG 194
KV DFG A++I P G T T Y APE + K S + DV+S G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 195 VLLLELISAKKPLEKLPG 212
+L EL ++P+ PG
Sbjct: 211 CILAELF-LRRPI--FPG 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++A+K + LN + + EV I+ + H N++ L ++ +Y +
Sbjct: 39 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 98
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 99 FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G T G+ Y APE GK D DV+S GV+L L+S P +
Sbjct: 159 NEFTVGGKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + L G +L+ MP L+
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVT-QLMPYGCLLD 107
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
H+ GRL LL+W +++ + E + D+ A NVL+ + K+ DFG A+
Sbjct: 108 HVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
Query: 155 LIP-DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKLPG 212
L+ D + K + ++A E + + + DV+S+GV + EL++ KP + +P
Sbjct: 168 LLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 227
Query: 213 GVKRDIVQ 220
D+++
Sbjct: 228 REIPDLLE 235
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 39/198 (19%)
Query: 43 IAVKRLKTLNAKAEMEFAV----EVEILGRVRHRNLLGLRGF-----YAGGDERLIVYDY 93
+A+K+++ + FA+ E++IL +H N++ + + +E I+ +
Sbjct: 39 VAIKKIEPFDKPL---FALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95
Query: 94 MPNHSLITHLHGRLAPDCLLDWH---------RRVSIAIGSAEGIADIKASNVLLDTDFE 144
M T LH ++ L D H R V + GS D+K SN+L++++ +
Sbjct: 96 MQ-----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 145 AKVADFGFAKLI---------PDGVTHMTTRVKGTLGYLAPEYAMW-GKVSDSCDVYSFG 194
KV DFG A++I P G T T Y APE + K S + DV+S G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 195 VLLLELISAKKPLEKLPG 212
+L EL ++P+ PG
Sbjct: 211 CILAELF-LRRPI--FPG 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 41/259 (15%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 100 ITHLHGRLAPDC------LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDF 143
+ L + D L+ + + A+G+A D+ A NVLL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 189
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ I + ++ VKG + ++APE + DV+S+G+LL E
Sbjct: 190 VAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 200 LISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRC 258
+ S L PG V + V Q +A P K++ I C
Sbjct: 247 IFSLG--LNPYPGILVNSKFYKLVKDGYQ------MAQPAFAP-------KNIYSIMQAC 291
Query: 259 TDSNPENRPTMTDVVDWLK 277
P +RPT + +L+
Sbjct: 292 WALEPTHRPTFQQICSFLQ 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+R + Y+ +
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLME 129
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+L++T + K+ DFG
Sbjct: 130 TDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFG 189
Query: 152 FAKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ H T T Y APE + K + S D++S G +L E++S +
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 44 AVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+K LK TL + + +E +IL V H ++ L + + ++ D++ L T
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 102 HLHGRLAPDCLLD------WHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
RL+ + + + +++A+ + D+K N+LLD + K+ DFG
Sbjct: 116 ----RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 152 FAKLIPDGVTHMTTRVK--GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+K + + H GT+ Y+APE + S D +SFGVL+ E+++ P +
Sbjct: 172 LSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL- 99
++A++++ L + + E + E+ ++ ++ N++ Y GDE +V +Y+ SL
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 100 --ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGF-A 153
+T G++A C + + + + DIK+ N+LL D K+ DFGF A
Sbjct: 106 DVVTETCMDEGQIAAVCR-ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
++ P+ + + GT ++APE D++S G++ +E+I + P
Sbjct: 165 QITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 44 AVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+K LK TL + + +E +IL V H ++ L + + ++ D++ L T
Sbjct: 57 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 116
Query: 102 HLHGRLAPDCLLD------WHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
RL+ + + + +++A+ + D+K N+LLD + K+ DFG
Sbjct: 117 ----RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 152 FAKLIPDGVTHMTTRVK--GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+K + + H GT+ Y+APE + S D +SFGVL+ E+++ P +
Sbjct: 173 LSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL- 99
++A++++ L + + E + E+ ++ ++ N++ Y GDE +V +Y+ SL
Sbjct: 48 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 100 --ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAK 154
+T G++A C + + + + +IK+ N+LL D K+ DFGF
Sbjct: 107 DVVTETCMDEGQIAAVCR-ECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCA 165
Query: 155 LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
I + +T V GT ++APE D++S G++ +E+I + P
Sbjct: 166 QITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+AVK + TL + +F E IL + H N++ L G IV + + +T
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 102 HLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAK 154
L RL LL + + E D+ A N L+ K++DFG ++
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 155 LIPDGVTHMTTRVKGT-LGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKLPG 212
DGV + ++ + + APE +G+ S DV+SFG+LL E S P L
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 213 GVKRDIVQ 220
R+ V+
Sbjct: 322 QQTREFVE 329
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K NVLLD D +++D G A + G T T GT G++APE + + S D
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 191 YSFGVLLLELISAKKPL 207
++ GV L E+I+A+ P
Sbjct: 373 FALGVTLYEMIAARGPF 389
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 44 AVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+K LK TL + + +E +IL V H ++ L + + ++ D++ L T
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 102 HLHGRLAPDCLLD------WHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
RL+ + + + +++A+ + D+K N+LLD + K+ DFG
Sbjct: 116 ----RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 152 FAKLIPDGVTHMTTRVK--GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+K + + H GT+ Y+APE + S D +SFGVL+ E+++ P +
Sbjct: 172 LSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K NVLLD D +++D G A + G T T GT G++APE + + S D
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 191 YSFGVLLLELISAKKPL 207
++ GV L E+I+A+ P
Sbjct: 373 FALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K NVLLD D +++D G A + G T T GT G++APE + + S D
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 191 YSFGVLLLELISAKKPL 207
++ GV L E+I+A+ P
Sbjct: 373 FALGVTLYEMIAARGPF 389
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 189
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 190 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 237
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 238 YDLMNL----CWTYDVENRPGFAAV 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 191
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 192 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 239
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 240 YDLMNL----CWTYDVENRPGFAAV 260
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K NVLLD D +++D G A + G T T GT G++APE + + S D
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 191 YSFGVLLLELISAKKPL 207
++ GV L E+I+A+ P
Sbjct: 373 FALGVTLYEMIAARGPF 389
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL- 99
++A++++ L + + E + E+ ++ ++ N++ Y GDE +V +Y+ SL
Sbjct: 48 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 100 --ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGF-A 153
+T G++A C + + + + DIK+ N+LL D K+ DFGF A
Sbjct: 107 DVVTETCMDEGQIAAVCR-ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 165
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
++ P+ + + GT ++APE D++S G++ +E+I + P
Sbjct: 166 QITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL- 99
++A++++ L + + E + E+ ++ ++ N++ Y GDE +V +Y+ SL
Sbjct: 47 EVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 100 --ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGF-A 153
+T G++A C + + + + DIK+ N+LL D K+ DFGF A
Sbjct: 106 DVVTETCMDEGQIAAVCR-ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
++ P+ + + GT ++APE D++S G++ +E+I + P
Sbjct: 165 QITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT--LGYLAPEYAMWGKVSDSC 188
D+ A NVLL AK++DFG +K + ++ T R G L + APE + K S
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPG 212
DV+S+GV + E +S +KP +K+ G
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 201
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 249
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 250 YDLMNL----CWTYDVENRPGFAAV 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 43 IAVKRL----KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDY-MPNH 97
+A+K++ K N K + + EV L ++RH N + RG Y +V +Y + +
Sbjct: 82 VAIKKMSYSGKQSNEKWQ-DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 140
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
S + +H + + + ++ G+ +G+A D+KA N+LL K+
Sbjct: 141 SDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMW---GKVSDSCDVYSFGVLLLELISAK 204
DFG A ++ GT ++APE + G+ DV+S G+ +EL K
Sbjct: 196 GDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
Query: 205 KPLEKLPG-GVKRDIVQWVTPYVQKG----AFEHIADPRLKGKFNRDQLKSMVLIALR 257
PL + I Q +P +Q G F + D L+ K +D+ S VL+ R
Sbjct: 251 PPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ-KIPQDRPTSEVLLKHR 307
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 101
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 162 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 221
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 222 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 266
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 267 VALRDFL 273
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 46/245 (18%)
Query: 43 IAVKRL----KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDY-MPNH 97
+A+K++ K N K + + EV L ++RH N + RG Y +V +Y + +
Sbjct: 43 VAIKKMSYSGKQSNEKWQ-DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 101
Query: 98 SLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKV 147
S + +H + + + ++ G+ +G+A D+KA N+LL K+
Sbjct: 102 SDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMW---GKVSDSCDVYSFGVLLLELISAK 204
DFG A ++ GT ++APE + G+ DV+S G+ +EL K
Sbjct: 157 GDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
Query: 205 KPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNP 263
PL + I Q +P +Q G + ++ R+ + S C P
Sbjct: 212 PPLFNMNAMSALYHIAQNESPALQSGHW---------SEYFRNFVDS-------CLQKIP 255
Query: 264 ENRPT 268
++RPT
Sbjct: 256 QDRPT 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 243
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 244 YDLMNL----CWTYDVENRPGFAAV 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 56 EMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDW 115
E + E+EI + H N+L L ++ ++ +Y P L+ L C D
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPR----GELYKELQKSCTFDE 122
Query: 116 HRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTT 165
R +I A+ + DIK N+LL E K+ADFG++ P +
Sbjct: 123 QRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRK 179
Query: 166 RVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE ++ D++ GVL EL+ P E
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 101
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 162 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 221
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 222 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 266
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 267 VALRDFL 273
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 131 DIKASNVLL---DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+L + + E K+ DFGFA+L P + T TL Y APE +S
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNGYDES 189
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CD++S GV+L ++S + P + + + ++KG F
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 97
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 158 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 218 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 262
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 263 VALRDFL 269
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKS 195
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 243
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 244 YDLMNL----CWTYDVENRPGFAAV 264
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 33/187 (17%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGF------------YAGGDER 87
++AVK + LN+ + + EV I+ + H N++ L YA G E
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE- 92
Query: 88 LIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDF 143
V+DY+ H + R R++ A+ D+KA N+LLD D
Sbjct: 93 --VFDYLVAHGWMKEKEARAK-------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 143
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELI 201
K+ADFGF+ G + G+ Y APE GK D DV+S GV+L L+
Sbjct: 144 NIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLV 200
Query: 202 SAKKPLE 208
S P +
Sbjct: 201 SGSLPFD 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 97
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 158 MRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 218 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 262
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 263 VALRDFL 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 107
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 168 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 228 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 272
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 273 VALRDFL 279
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 181
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDXXKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 236
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 44/261 (16%)
Query: 38 TGDDQIAVKRL-KTLNAKAEMEFAVEVEI--LGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
T ++A+K + K + AK++M+ +E EI L +RH +++ L DE ++V +Y
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 96
Query: 95 PNHSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA--------DIKASNVLLDTDFEA 145
N L ++ R D + + RR I SA D+K N+LLD
Sbjct: 97 GN-ELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV 152
Query: 146 KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLLELISA 203
K+ADFG + ++ DG T+ G+ Y APE + GK+ DV+S GV+L ++
Sbjct: 153 KIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 204 KKPL--EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDS 261
+ P E +P K + G + P+ +K M+++
Sbjct: 210 RLPFDDESIPVLFKN---------ISNGVY---TLPKFLSPGAAGLIKRMLIV------- 250
Query: 262 NPENRPTMTDVV--DWLKGGL 280
NP NR ++ +++ DW K L
Sbjct: 251 NPLNRISIHEIMQDDWFKVDL 271
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 209
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 210 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 257
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 258 YDLMNL----CWTYDVENRPGFAAV 278
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 29/247 (11%)
Query: 43 IAVKRLKT---LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK +A +F EV + + HRNL+ L G +++ + P SL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 107
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 168 MRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 228 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 272
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 273 VALRDFL 279
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 43 IAVKRLK--TLNAKAEME-FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+AVK LK L+ M+ F EV + + HRNL+ L G +++ + P SL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSL 97
Query: 100 ITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGF 152
+ L G L + +V+ +G E D+ A N+LL T K+ DFG
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Query: 153 AKLIPDGVTH--MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEK 209
+ +P H M K + APE S + D + FGV L E+ + ++P
Sbjct: 158 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217
Query: 210 LPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTM 269
L G Q + ++G E + P D + + + ++C PE+RPT
Sbjct: 218 LNGS------QILHKIDKEG--ERLPRP-------EDCPQDIYNVMVQCWAHKPEDRPTF 262
Query: 270 TDVVDWL 276
+ D+L
Sbjct: 263 VALRDFL 269
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 44/261 (16%)
Query: 38 TGDDQIAVKRL-KTLNAKAEMEFAVEVEI--LGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
T ++A+K + K + AK++M+ +E EI L +RH +++ L DE ++V +Y
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 86
Query: 95 PNHSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA--------DIKASNVLLDTDFEA 145
N L ++ R D + + RR I SA D+K N+LLD
Sbjct: 87 GN-ELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV 142
Query: 146 KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLLELISA 203
K+ADFG + ++ DG T+ G+ Y APE + GK+ DV+S GV+L ++
Sbjct: 143 KIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 204 KKPL--EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDS 261
+ P E +P K + G + P+ +K M+++
Sbjct: 200 RLPFDDESIPVLFKN---------ISNGVY---TLPKFLSPGAAGLIKRMLIV------- 240
Query: 262 NPENRPTMTDVV--DWLKGGL 280
NP NR ++ +++ DW K L
Sbjct: 241 NPLNRISIHEIMQDDWFKVDL 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 80 FYAGGDERLI--VYDYMPNHSLITHLHGRLAPDCLLDWHR----RVSIAIGSAEGIA--- 130
FYA D+R + V +YMP L+ + P+ W R V +A+ + +
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLALDAIHSMGFIH 191
Query: 131 -DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMW----GKV 184
D+K N+LLD K+ADFG K+ +G+ T V GT Y++PE G
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 250
Query: 185 SDSCDVYSFGVLLLELISAKKPL 207
CD +S GV L E++ P
Sbjct: 251 GRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 80 FYAGGDERLI--VYDYMPNHSLITHLHGRLAPDCLLDWHR----RVSIAIGSAEGIA--- 130
FYA D+R + V +YMP L+ + P+ W R V +A+ + +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLALDAIHSMGFIH 196
Query: 131 -DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMW----GKV 184
D+K N+LLD K+ADFG K+ +G+ T V GT Y++PE G
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 185 SDSCDVYSFGVLLLELISAKKPL 207
CD +S GV L E++ P
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 44/261 (16%)
Query: 38 TGDDQIAVKRL-KTLNAKAEMEFAVEVEI--LGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
T ++A+K + K + AK++M+ +E EI L +RH +++ L DE ++V +Y
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95
Query: 95 PNHSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA--------DIKASNVLLDTDFEA 145
N L ++ R D + + RR I SA D+K N+LLD
Sbjct: 96 GN-ELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV 151
Query: 146 KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLLELISA 203
K+ADFG + ++ DG T+ G+ Y APE + GK+ DV+S GV+L ++
Sbjct: 152 KIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 204 KKPL--EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDS 261
+ P E +P K + G + P+ +K M+++
Sbjct: 209 RLPFDDESIPVLFKN---------ISNGVY---TLPKFLSPGAAGLIKRMLIV------- 249
Query: 262 NPENRPTMTDVV--DWLKGGL 280
NP NR ++ +++ DW K L
Sbjct: 250 NPLNRISIHEIMQDDWFKVDL 270
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 100 ITHLHGRLAPD---CLLDWHRR---------VSIAIGSAEGIA----------DIKASNV 137
+L R P C H VS A A G+ D+ A NV
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 166
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 167 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 221
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 222 SFGVLLWEIFT 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 80 FYAGGDERLI--VYDYMPNHSLITHLHGRLAPDCLLDWHR----RVSIAIGSAEGIA--- 130
FYA D+R + V +YMP L+ + P+ W R V +A+ + +
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLALDAIHSMGFIH 196
Query: 131 -DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMW----GKV 184
D+K N+LLD K+ADFG K+ +G+ T V GT Y++PE G
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 185 SDSCDVYSFGVLLLELISAKKPL 207
CD +S GV L E++ P
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 211
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 212 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 259
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 260 YDLMNL----CWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 211
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 212 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 259
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 260 YDLMNL----CWTYDVENRPGFAAV 280
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 55 AEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCL 112
E + E+EI +RH N+L + ++ ++ ++ P L L HGR
Sbjct: 58 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF----- 112
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A+ + DIK N+L+ E K+ADFG++ P +
Sbjct: 113 -DEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SL 168
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE + GK D D++ GVL E + P +
Sbjct: 169 RRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 44/261 (16%)
Query: 38 TGDDQIAVKRL-KTLNAKAEMEFAVEVEI--LGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
T ++A+K + K + AK++M+ +E EI L +RH +++ L DE ++V +Y
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 90
Query: 95 PNHSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA--------DIKASNVLLDTDFEA 145
N L ++ R D + + RR I SA D+K N+LLD
Sbjct: 91 GN-ELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV 146
Query: 146 KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLLELISA 203
K+ADFG + ++ DG T+ G+ Y APE + GK+ DV+S GV+L ++
Sbjct: 147 KIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 204 KKPL--EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDS 261
+ P E +P K + G + P+ +K M+++
Sbjct: 204 RLPFDDESIPVLFKN---------ISNGVY---TLPKFLSPGAAGLIKRMLIV------- 244
Query: 262 NPENRPTMTDVV--DWLKGGL 280
NP NR ++ +++ DW K L
Sbjct: 245 NPLNRISIHEIMQDDWFKVDL 265
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 44 AVKRLK--TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+K LK TL + + +E +IL V H ++ L + + ++ D++ L T
Sbjct: 60 AMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFT 119
Query: 102 HLHGRLAPDCLLDWH----RRVSIAIG----SAEGIA--DIKASNVLLDTDFEAKVADFG 151
RL+ + + +A+G + GI D+K N+LLD + K+ DFG
Sbjct: 120 ----RLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 175
Query: 152 FAKLIPDGVTHMTTRVK--GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+K + + H GT+ Y+APE S S D +S+GVL+ E+++ P +
Sbjct: 176 LSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEI--LGRVRHRNLLGLRGF------------YAGGDE 86
++A+K + + L K++M VE EI L +RH +++ L YAGG+
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE- 94
Query: 87 RLIVYDYMPNHSLITHLHGRLAPD---CLLDWHRRVSIAIGSAEGIADIKASNVLLDTDF 143
++DY+ +T GR C +++ R I D+K N+LLD +
Sbjct: 95 ---LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH------RDLKPENLLLDDNL 145
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLLELI 201
K+ADFG + ++ DG T+ G+ Y APE + GK+ DV+S G++L ++
Sbjct: 146 NVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVML 202
Query: 202 SAKKPL--EKLPGGVKR 216
+ P E +P K+
Sbjct: 203 VGRLPFDDEFIPNLFKK 219
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 55 AEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCL 112
E + E+EI +RH N+L + ++ ++ ++ P L L HGR
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF----- 111
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A+ + DIK N+L+ E K+ADFG++ P +
Sbjct: 112 -DEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SL 167
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE + GK D D++ GVL E + P +
Sbjct: 168 RRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 55 AEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCL 112
E + E+EI +RH N+L + ++ ++ ++ P L L HGR
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF----- 111
Query: 113 LDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH 162
D R + A+ + DIK N+L+ E K+ADFG++ P +
Sbjct: 112 -DEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SL 167
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDS-CDVYSFGVLLLELISAKKPLE 208
+ GTL YL PE + GK D D++ GVL E + P +
Sbjct: 168 RRRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 170
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 171 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 225
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 226 SFGVLLWEIFT 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++A+K + LN + + EV I+ + H N++ L ++ +Y +
Sbjct: 42 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFA 153
+L HGR+ R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 102 FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G G Y APE GK D DV+S GV+L L+S P +
Sbjct: 162 NEFTVG--GKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 554
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 555 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 602
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 603 YDLMNL----CWTYDVENRPGFAAV 623
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 100 ITHLHGRLAPD---CLLDWHRR---------VSIAIGSAEGIA----------DIKASNV 137
+L R P C H VS A A G+ D+ A NV
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 181
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 236
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSC 188
D+ A NVLL T AK++DFG +K + + T K + + APE + K S
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 553
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV+SFGVL+ E S +KP + G VT ++KG E + P R+
Sbjct: 554 DVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKG--ERMGCP---AGCPREM 601
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
M L C + ENRP V
Sbjct: 602 YDLMNL----CWTYDVENRPGFAAV 622
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---LAPDCLLD 114
+ ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 85 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARY 143
Query: 115 WHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKG 169
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG + G
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCG 201
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T Y+APE S DV+S G ++ L+ K P E
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 223 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 277
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 278 SFGVLLWEIFT 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 173
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 174 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 228
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 229 SFGVLLWEIFT 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---L 107
L + ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKAL 138
Query: 108 APDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTH 162
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--E 196
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+ GT Y+APE S DV+S G ++ L+ K P E
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 174
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 175 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 229
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 230 SFGVLLWEIFT 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR---LAPDCLLD 114
+ ++E+ I + H++++G GF+ D +V + SL+ LH R L
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARY 119
Query: 115 WHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKG 169
+ R++ + D+K N+ L+ D E K+ DFG A K+ DG + G
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCG 177
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T Y+APE S DV+S G ++ L+ K P E
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 181
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 236
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 42 QIAVKRL--KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK + LN+ + + EV I + H N++ L +V +Y +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 100 ITHL--HGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFA 153
+L HGR R++ A+ D+KA N+LLD D K+ADFGF+
Sbjct: 101 FDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
G + G Y APE GK D DV+S GV+L L+S P +
Sbjct: 161 NEFTFG--NKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 42 QIAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK+ + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+L R P ++ VS A A G+ D+ A NV
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 181
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKV-SDSCDVY 191
L+ D K+ADFG A+ + H+ K T G ++APE A++ ++ + DV+
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVW 236
Query: 192 SFGVLLLELIS 202
SFGVLL E+ +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 47/265 (17%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 100 ITHLHGRLAPDCLLDWHRR------------VSIAIGSAEGIA----------DIKASNV 137
+ L + P ++ + + A+G+A D+ A NV
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 197
Query: 138 LLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYSF 193
LL AK+ DFG A+ I + ++ VKG + ++APE + DV+S+
Sbjct: 198 LLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 194 GVLLLELISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMV 252
G+LL E+ S L PG V + V Q +A P K++
Sbjct: 255 GILLWEIFSLG--LNPYPGILVNSKFYKLVKDGYQ------MAQPAFAP-------KNIY 299
Query: 253 LIALRCTDSNPENRPTMTDVVDWLK 277
I C P +RPT + +L+
Sbjct: 300 SIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 39/198 (19%)
Query: 43 IAVKRLKTLNAKAEMEFAV----EVEILGRVRHRNLLGLRGF-----YAGGDERLIVYDY 93
+A+K+++ + FA+ E++IL +H N++ + + +E I+ +
Sbjct: 39 VAIKKIEPFDKPL---FALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95
Query: 94 MPNHSLITHLHGRLAPDCLLDWH---------RRVSIAIGSAEGIADIKASNVLLDTDFE 144
M T LH ++ L D H R V + GS D+K SN+L++++ +
Sbjct: 96 MQ-----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 145 AKVADFGFAKLI---------PDGVTHMTTRVKGTLGYLAPEYAMW-GKVSDSCDVYSFG 194
KV DFG A++I P G T Y APE + K S + DV+S G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 195 VLLLELISAKKPLEKLPG 212
+L EL ++P+ PG
Sbjct: 211 CILAELF-LRRPI--FPG 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 54 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 48 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 107
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 168 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 48 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 107
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 168 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 52 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 55 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 114
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 175 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 56 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 115
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 116 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 175
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 176 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 47 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 106
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 107 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 166
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 167 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 54 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 70 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 129
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 130 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 189
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 190 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFG 169
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 58 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 117
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 118 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 177
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 178 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 50 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFY-AGGDERL----IVYDYMP 95
++A+K++ + + + E++IL R RH N++G+ A E++ IV D M
Sbjct: 54 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 96 N--HSLITHLHGRLAPDCLLDWH-RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
+ L+ H C + R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL-HGRLAPDCLLDWHRRVS 120
E+++L ++G G + E I ++M SL L + P+ +L +VS
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG---KVS 120
Query: 121 IAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
IA+ G+A D+K SN+L+++ E K+ DFG + + D M G
Sbjct: 121 IAV--LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVG 175
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
T Y+APE S D++S G+ L+EL + P+
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL E K+ADFG A + D T V GT ++APE D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS 250
+S G+ +EL + P +L ++ P P L+G +++ LK
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNYSKP-LKE 234
Query: 251 MVLIALRCTDSNPENRPTMTDVV 273
V C + P RPT +++
Sbjct: 235 FV---EACLNKEPSFRPTAKELL 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 89 IVYDYMPNHSLITHLH--GRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTD 142
+V +Y P + +HL GR + + ++ + + D+K N+L+D
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 143 FEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KVADFGFAK V T + GT YLAPE + + + D ++ GVL+ E+ +
Sbjct: 179 GYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 203 AKKPL 207
P
Sbjct: 235 GYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCD 189
D+K NVLLD + K+ADFG K I +GVT T GT Y+APE + D
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVD 206
Query: 190 VYSFGVLLLELISAKKPLE 208
++ GVLL E++ P E
Sbjct: 207 WWAMGVLLYEMLCGHAPFE 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 81 YAGGDER--LIVYDYMPNHSLITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----D 131
YA DE +V DY L+T L +L D + + +AI S + D
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRD 216
Query: 132 IKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPE--YAM---WGKVSD 186
IK NVLLD + ++ADFG + D T ++ GT Y++PE AM GK
Sbjct: 217 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 276
Query: 187 SCDVYSFGVLLLELISAKKPL 207
CD +S GV + E++ + P
Sbjct: 277 ECDWWSLGVCMYEMLYGETPF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 199
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL E K+ADFG A + D T V GT ++APE D+
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 207
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS 250
+S G+ +EL + P +L ++ P P L+G +++ LK
Sbjct: 208 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNYSK-PLKE 254
Query: 251 MVLIALRCTDSNPENRPTMTDVV 273
V C + P RPT +++
Sbjct: 255 FV---EACLNKEPSFRPTAKELL 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 81 YAGGDER--LIVYDYMPNHSLITHL---HGRLAPDCLLDWHRRVSIAIGSAEGIA----D 131
YA DE +V DY L+T L +L D + + +AI S + D
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRD 200
Query: 132 IKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEY--AM---WGKVSD 186
IK NVLLD + ++ADFG + D T ++ GT Y++PE AM GK
Sbjct: 201 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 260
Query: 187 SCDVYSFGVLLLELISAKKPL 207
CD +S GV + E++ + P
Sbjct: 261 ECDWWSLGVCMYEMLYGETPF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLA 192
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 48/260 (18%)
Query: 43 IAVKRLKTLNAKAE-------MEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
+A+K L +++ E EF EV I+ + H N++ L G +V +++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 96 NHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLDTDF 143
L L + P + W ++ + + A GI D+++ N+ L +
Sbjct: 105 CGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 144 E-----AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEY--AMWGKVSDSCDVYSFGVL 196
E AKVADFG ++ H + + G ++APE A ++ D YSF ++
Sbjct: 162 ENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 197 LLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIAL 256
L +++ + P ++ G K + + + PRL+ +I L
Sbjct: 218 LYTILTGEGPFDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLRN-----------VIEL 265
Query: 257 RCTDSNPENRPTMTDVVDWL 276
C +P+ RP + +V L
Sbjct: 266 -CWSGDPKKRPHFSYIVKEL 284
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEYLA 227
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A++++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 54 RVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 29/166 (17%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
EV+IL +V H N++ L+ Y +V+D M L +L ++ L
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRK 115
Query: 121 IAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
I E I D+K N+LLD D K+ DFGF+ + G V GT
Sbjct: 116 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGT 173
Query: 171 LGYLAPE---------YAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + +GK D++S GV++ L++ P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMWGKVSDSC 188
++ A NVLL AK++DFG +K + ++ T R G L + APE + K S
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 520
Query: 189 DVYSFGVLLLELIS-AKKPLEKLPG 212
DV+S+GV + E +S +KP +K+ G
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 71 HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHG--RLAPDCLLDWHRRVSIAIG--SA 126
H L+GL + V +Y+ L+ H+ +L + + +S+A+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 127 EGIA--DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWG 182
GI D+K NVLLD++ K+ D+G K L P T + GT Y+APE
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGE 196
Query: 183 KVSDSCDVYSFGVLLLELISAKKPLE 208
S D ++ GVL+ E+++ + P +
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 147
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T T GT YLAPE + D + GV++ E++ + P
Sbjct: 148 DFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 46/260 (17%)
Query: 36 RETGDDQIAVKRLKTLNAKAEME---FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYD 92
+ETG A+ K + K+E E + VE+EIL H ++ L G Y + I+ +
Sbjct: 33 KETG----ALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 88
Query: 93 YMPN---HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEA 145
+ P +++ L L + R++ A+ D+KA NVL+ + +
Sbjct: 89 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDI 148
Query: 146 KVADFGFAKLIPDGVTHMTTRVK-----GTLGYLAPEYAMWGKVSDS-----CDVYSFGV 195
++ADFG + ++ T K GT ++APE M + D+ D++S G+
Sbjct: 149 RLADFGVS------AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 202
Query: 196 LLLELISAKKPLEKL-PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLI 254
L+E+ + P +L P V I + P + + + +F RD LK I
Sbjct: 203 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-------LTPSKWSVEF-RDFLK----I 250
Query: 255 ALRCTDSNPENRPTMTDVVD 274
AL D NPE RP+ +++
Sbjct: 251 AL---DKNPETRPSAAQLLE 267
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ ++ H+N++ G R I+ + M L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 183 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 239 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 283
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 284 QHQPEDRPNFAIILE 298
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ ++ H+N++ G R I+ + M L
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 197 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 253 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 297
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 298 QHQPEDRPNFAIILE 312
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 71 HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHG--RLAPDCLLDWHRRVSIAIG--SA 126
H L+GL + V +Y+ L+ H+ +L + + +S+A+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 127 EGIA--DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWG 182
GI D+K NVLLD++ K+ D+G K L P T + GT Y+APE
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGE 228
Query: 183 KVSDSCDVYSFGVLLLELISAKKPLE 208
S D ++ GVL+ E+++ + P +
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 100 ITHLHGR----------LAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLL 139
+ L + + L + + A+G+A D+ A NVLL
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYSFGV 195
AK+ DFG A+ I + ++ VKG + ++APE + DV+S+G+
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 196 LLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIA 255
LL E+ S L PG + + V+ G +A P K++ I
Sbjct: 255 LLWEIFSLG--LNPYPGIL---VNSKFYKLVKDGY--QMAQPAFAP-------KNIYSIM 300
Query: 256 LRCTDSNPENRPTMTDVVDWLK 277
C P +RPT + +L+
Sbjct: 301 QACWALEPTHRPTFQQICSFLQ 322
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 36 RETGDDQIAVKRLKTLNAKAEME---FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYD 92
+ETG A+ K + K+E E + VE+EIL H ++ L G Y + I+ +
Sbjct: 41 KETG----ALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96
Query: 93 YMPN---HSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVLLDTDFEA 145
+ P +++ L L + R++ A+ D+KA NVL+ + +
Sbjct: 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDI 156
Query: 146 KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS-----CDVYSFGVLLLEL 200
++ADFG + + + + GT ++APE M + D+ D++S G+ L+E+
Sbjct: 157 RLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Query: 201 ISAKKPLEKL-PGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ P +L P V I + P + + + +F RD LK IAL
Sbjct: 216 AQIEPPHHELNPMRVLLKIAKSDPPTL-------LTPSKWSVEF-RDFLK----IAL--- 260
Query: 260 DSNPENRPTMTDVVD 274
D NPE RP+ +++
Sbjct: 261 DKNPETRPSAAQLLE 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 29/166 (17%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
EV+IL +V H N++ L+ Y +V+D M L +L ++ L
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRK 128
Query: 121 IAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
I E I D+K N+LLD D K+ DFGF+ + G V GT
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGT 186
Query: 171 LGYLAPE---------YAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + +GK D++S GV++ L++ P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 229
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 147
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T T GT YLAPE + D + GV++ E++ + P
Sbjct: 148 DFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 38 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 97
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 98 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 150
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T T GT YLAPE + D + GV++ E++ + P
Sbjct: 151 DFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+P + +HL GR + ++
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 199
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 71 HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHG--RLAPDCLLDWHRRVSIAIG--SA 126
H L+GL + V +Y+ L+ H+ +L + + +S+A+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 127 EGIA--DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWG 182
GI D+K NVLLD++ K+ D+G K L P G T T+ GT Y+APE
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSXFCGTPNYIAPEILRGE 181
Query: 183 KVSDSCDVYSFGVLLLELISAKKPLE 208
S D ++ GVL+ E+++ + P +
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 42/210 (20%)
Query: 81 YAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLD----WHRRVSIAIGSAEGIADIKASN 136
Y G E ++DY+ H + + R +L HR + + D+K N
Sbjct: 92 YVSGGE---LFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH-------RDLKPEN 141
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFG 194
VLLD AK+ADFG + ++ DG T+ G+ Y APE + G++ D++S G
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISGRLYAGPEVDIWSCG 198
Query: 195 VLLLELISAKKPL--EKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMV 252
V+L L+ P E +P K+ ++ G F + NR S+
Sbjct: 199 VILYALLCGTLPFDDEHVPTLFKK---------IRGGVF------YIPEYLNR----SVA 239
Query: 253 LIALRCTDSNPENRPTMTDV--VDWLKGGL 280
+ + +P R T+ D+ +W K L
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 71 HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHG--RLAPDCLLDWHRRVSIAIG--SA 126
H L+GL + V +Y+ L+ H+ +L + + +S+A+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 127 EGIA--DIKASNVLLDTDFEAKVADFGFAK--LIPDGVTHMTTRVKGTLGYLAPEYAMWG 182
GI D+K NVLLD++ K+ D+G K L P G T T+ GT Y+APE
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT--TSXFCGTPNYIAPEILRGE 185
Query: 183 KVSDSCDVYSFGVLLLELISAKKPLE 208
S D ++ GVL+ E+++ + P +
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 197
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L L + +V +Y P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 29/166 (17%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
EV+IL +V H N++ L+ Y +V+D M L +L ++ L
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRK 128
Query: 121 IAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
I E I D+K N+LLD D K+ DFGF+ + G V GT
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLRSVCGT 186
Query: 171 LGYLAPE---------YAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + +GK D++S GV++ L++ P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 58 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 198
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 199 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 254
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 255 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 299
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 300 QHQPEDRPNFAIILE 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L L + +V +Y P + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 59 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 182 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 238 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 282
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 283 QHQPEDRPNFAIILE 297
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 35 RRETGDDQIAVKRLKTLN-------AKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER 87
R+ +G D + +K L AK E ++L +R L + + +
Sbjct: 74 RKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133
Query: 88 L-IVYDYMPNHSLITHLHGR--LAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLD 140
L ++ DY+ L THL R + + + +A+ + DIK N+LLD
Sbjct: 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 141 TDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSCDVYSFGVLLL 198
++ + DFG +K T GT+ Y+AP+ G + D +S GVL+
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 199 ELISAKKPL-----EKLPGGVKRDIVQWVTPYVQK 228
EL++ P + + R I++ PY Q+
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 288
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 197 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 253 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 297
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 298 QHQPEDRPNFAIILE 312
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 173
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 174 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 229
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 230 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 274
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 275 QHQPEDRPNFAIILE 289
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 188
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 189 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 245 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 289
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 290 QHQPEDRPNFAIILE 304
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 42 QIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+ AVK + +AK + + EVE+L ++ H N++ L IV + L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDT---DFEAK 146
+ R H I GI D+K N+LL++ D + K
Sbjct: 109 FDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
+ DFG + T M R+ GT Y+APE + G + CDV+S GV+L L+S P
Sbjct: 165 IIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
Query: 207 L 207
Sbjct: 222 F 222
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 181
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 182 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 238 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 282
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 283 QHQPEDRPNFAIILE 297
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 80 FYAGGDERLI--VYDYMPNHSLITHLHGRLAPDCLLDWHR-RVSIAIGSAEGIA----DI 132
F A D++ + V +YMP L+ + P+ ++ V +A+ + + D+
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 133 KASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMW----GKVSDS 187
K N+LLD K+ADFG K+ G+ H T V GT Y++PE G
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRE 259
Query: 188 CDVYSFGVLLLELISAKKPL 207
CD +S GV L E++ P
Sbjct: 260 CDWWSVGVFLFEMLVGDTPF 279
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 60 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 197
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 57 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 42 QIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+ AVK + +AK + + EVE+L ++ H N++ L IV + L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDT---DFEAK 146
+ R H I GI D+K N+LL++ D + K
Sbjct: 109 FDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
+ DFG + T M R+ GT Y+APE + G + CDV+S GV+L L+S P
Sbjct: 165 IIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
Query: 207 L 207
Sbjct: 222 F 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 193
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 42 QIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
+ AVK + +AK + + EVE+L ++ H N++ L IV + L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDT---DFEAK 146
+ R H I GI D+K N+LL++ D + K
Sbjct: 109 FDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 147 VADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
+ DFG + T M R+ GT Y+APE + G + CDV+S GV+L L+S P
Sbjct: 165 IIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
Query: 207 L 207
Sbjct: 222 F 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 208
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 209 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 265 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 309
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 310 QHQPEDRPNFAIILE 324
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 141 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 196
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 197 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 185
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 186 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 209
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 210 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 183 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 239 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 283
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 284 QHQPEDRPNFAIILE 298
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 48/260 (18%)
Query: 43 IAVKRLKTLNAKAE-------MEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
+A+K L +++ E EF EV I+ + H N++ L G + +V +++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVP 104
Query: 96 NHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLDTDF 143
L L + P + W ++ + + A GI D+++ N+ L +
Sbjct: 105 CGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 144 E-----AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEY--AMWGKVSDSCDVYSFGVL 196
E AKVADFG ++ H + + G ++APE A ++ D YSF ++
Sbjct: 162 ENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 197 LLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIAL 256
L +++ + P ++ G K + + + PRL+ +I L
Sbjct: 218 LYTILTGEGPFDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLRN-----------VIEL 265
Query: 257 RCTDSNPENRPTMTDVVDWL 276
C +P+ RP + +V L
Sbjct: 266 -CWSGDPKKRPHFSYIVKEL 284
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T T
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV----ATR 186
Query: 172 GYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 188
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 184
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 185 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 42 QIAVKRLK---TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK K TL+ K + F E I+ + H +++ L G + I+ + P
Sbjct: 38 NVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGE 94
Query: 99 LITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L +L L L+ + ++ A+ E I DI N+L+ + K+ DFG
Sbjct: 95 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 154
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ I D + + + + +++PE + + + + DV+ F V + E++S K+P L
Sbjct: 155 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNRDQLKSMVLIAL--RCTDSNPENRP 267
+D++ G E KG + + L VL L RC D +P +RP
Sbjct: 215 EN---KDVI---------GVLE-------KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 255
Query: 268 TMTDVV 273
T++V
Sbjct: 256 RFTELV 261
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 79 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 83 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 42 QIAVKRLK---TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK K TL+ K + F E I+ + H +++ L G + I+ + P
Sbjct: 54 NVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGE 110
Query: 99 LITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L +L L L+ + ++ A+ E I DI N+L+ + K+ DFG
Sbjct: 111 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 170
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ I D + + + + +++PE + + + + DV+ F V + E++S K+P L
Sbjct: 171 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNRDQLKSMVLIAL--RCTDSNPENRP 267
+D++ G E KG + + L VL L RC D +P +RP
Sbjct: 231 EN---KDVI---------GVLE-------KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 271
Query: 268 TMTDVV 273
T++V
Sbjct: 272 RFTELV 277
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 182
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 183 AKIGDFGMAQ----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 239 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 283
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 284 QHQPEDRPNFAIILE 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 192
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 54 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T Y APE + K + S D++S G +L E++S +
Sbjct: 174 LARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 79 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 199
Query: 145 AKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISA 203
AK+ DFG A+ + G + ++ PE M G + D +SFGVLL E+ S
Sbjct: 200 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 259
Query: 204 KKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNP 263
P ++++++VT + ++ P + I +C P
Sbjct: 260 G--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQP 304
Query: 264 ENRPTMTDVVD 274
E+RP +++
Sbjct: 305 EDRPNFAIILE 315
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 42 QIAVKRLK---TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
+AVK K TL+ K + F E I+ + H +++ L G + I+ + P
Sbjct: 42 NVAVKTCKKDCTLDNKEK--FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGE 98
Query: 99 LITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFG 151
L +L L L+ + ++ A+ E I DI N+L+ + K+ DFG
Sbjct: 99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 158
Query: 152 FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
++ I D + + + + +++PE + + + + DV+ F V + E++S K+P L
Sbjct: 159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
Query: 211 PGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNRDQLKSMVLIAL--RCTDSNPENRP 267
+D++ G E KG + + L VL L RC D +P +RP
Sbjct: 219 EN---KDVI---------GVLE-------KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 259
Query: 268 TMTDVV 273
T++V
Sbjct: 260 RFTELV 265
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL R RH N++G+ + Y+ +
Sbjct: 55 RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 114
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T Y APE + K + S D++S G +L E++S +
Sbjct: 175 LARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 41/255 (16%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 77 QVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 145 AKVADFGFAKLIPDGVTHMTTRVKG-----TLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
AK+ DFG A+ + + KG + ++ PE M G + D +SFGVLL E
Sbjct: 197 AKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 200 LISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCT 259
+ S P ++++++VT + ++ P + I +C
Sbjct: 253 IFSLG--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCW 297
Query: 260 DSNPENRPTMTDVVD 274
PE+RP +++
Sbjct: 298 QHQPEDRPNFAIILE 312
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K +NV LD K+ DFG A+++ + T V GT Y++PE ++ D+
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDI 199
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNR----- 245
+S G LL EL + P T + QK +A +GKF R
Sbjct: 200 WSLGCLLYELCALMPPF---------------TAFSQK----ELAGKIREGKFRRIPYRY 240
Query: 246 -DQLKSMVLIALRCTDSNPENRPTMTDVVD 274
D+L ++ L D +RP++ ++++
Sbjct: 241 SDELNEIITRMLNLKDY---HRPSVEEILE 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 83 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 46/211 (21%)
Query: 44 AVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+KR+K +K + +FA E+E+L ++ H N++ L G + +Y P+ +L+
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 102 HLHGR--LAPD----------CLLDWHRRVSIAIGSAEGI----------ADIKASNVLL 139
L L D L + + A A G+ D+ A N+L+
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 165
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFG 194
++ AK+ADFG ++ VK T+G ++A E + + + DV+S+G
Sbjct: 166 GENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 218
Query: 195 VLLLELIS----------AKKPLEKLPGGVK 215
VLL E++S + EKLP G +
Sbjct: 219 VLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 64 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 122
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 42 QIAVKRL-KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q+AVK L + + + E++F +E I+ + H+N++ G R I+ + M L
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 101 THL-HGRLAPD-----CLLDW-HRRVSIAIGSAEGIA------DIKASNVLLDTDFE--- 144
+ L R P +LD H IA G DI A N LL
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 222
Query: 145 AKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISA 203
AK+ DFG A+ + G + ++ PE M G + D +SFGVLL E+ S
Sbjct: 223 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 282
Query: 204 KKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNP 263
P ++++++VT + ++ P + I +C P
Sbjct: 283 G--YMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQP 327
Query: 264 ENRPTMTDVVD 274
E+RP +++
Sbjct: 328 EDRPNFAIILE 338
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 46/211 (21%)
Query: 44 AVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+KR+K +K + +FA E+E+L ++ H N++ L G + +Y P+ +L+
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 102 HLHGR--LAPD----------CLLDWHRRVSIAIGSAEGI----------ADIKASNVLL 139
L L D L + + A A G+ D+ A N+L+
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 175
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFG 194
++ AK+ADFG ++ VK T+G ++A E + + + DV+S+G
Sbjct: 176 GENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 228
Query: 195 VLLLELIS----------AKKPLEKLPGGVK 215
VLL E++S + EKLP G +
Sbjct: 229 VLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K +K + + A+ E+ ++ ++H N++ L ++ +V+++M N L
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKK 91
Query: 102 HLHGRLAPDC----------LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVAD 149
++ R + W +A I D+K N+L++ + K+ D
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD 151
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLE 208
FG A+ V ++ V TL Y AP+ M + S S D++S G +L E+I+ KPL
Sbjct: 152 FGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPL- 208
Query: 209 KLPG 212
PG
Sbjct: 209 -FPG 211
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 128
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 129 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 183
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA N+LL+T+ AK+ADFG A + D + V GT ++APE + D+
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX-VIGTPFWMAPEVIQEIGYNCVADI 208
Query: 191 YSFGVLLLELISAKKP 206
+S G+ +E+ K P
Sbjct: 209 WSLGITAIEMAEGKPP 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 49 KTLNAKAEMEFAV------------EVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMP 95
+ ++ MEFAV E+EIL R +H N++ L+ Y G +V + M
Sbjct: 40 RCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99
Query: 96 NHSLITHL------HGRLAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDF---- 143
L+ + R A L + V A+G+ D+K SN+L +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYL--HAQGVVHRDLKPSNILYVDESGNPE 157
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISA 203
++ DFGFAK + + T T ++APE +CD++S GVLL +++
Sbjct: 158 SIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
Query: 204 KKPLEKLPGGVKRDIV 219
P P +I+
Sbjct: 217 YTPFANGPDDTPEEIL 232
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L L + +V +Y P + +HL GR + ++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV-YDYMPNHSLITHLH--GRLAPDCLLDWHRR 118
E +++ R+ H + L F DE+L Y N L+ ++ G C +
Sbjct: 85 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 143
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKGTLGY 173
+ A+ G D+K N+LL+ D ++ DFG AK++ P+ GT Y
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++PE S D+++ G ++ +L++ P
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 51/266 (19%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 100 ITHLHGRLAPDCLLDWHRRVSIAIGSA-------------EGIA----------DIKASN 136
+ L + +L+ +IA +A +G+A D+ A N
Sbjct: 138 LNFLRRK---SRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
VLL AK+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWS 251
Query: 193 FGVLLLELISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+LL E+ S L PG V + V Q +A P K++
Sbjct: 252 YGILLWEIFSLG--LNPYPGILVNSKFYKLVKDGYQ------MAQPAFAP-------KNI 296
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLK 277
I C P +RPT + +L+
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 171
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 172 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 226
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSXQEYSDW 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL E K+ADFG A + D V GT ++APE D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS 250
+S G+ +EL + P +L ++ P P L+G +++ LK
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNYSKP-LKE 234
Query: 251 MVLIALRCTDSNPENRPTMTDVV 273
V C + P RPT +++
Sbjct: 235 FV---EACLNKEPSFRPTAKELL 254
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 136
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 137 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 191
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL E K+ADFG A + D V GT ++APE D+
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 202
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKS 250
+S G+ +EL + P +L ++ P P L+G +++ LK
Sbjct: 203 WSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTLEGNYSK-PLKE 249
Query: 251 MVLIALRCTDSNPENRPTMTDVV 273
V C + P RPT +++
Sbjct: 250 FVEA---CLNKEPSFRPTAKELL 269
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 44 AVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAG-------GDERLIVYDYMPN 96
++R+K N KAE E V+ L ++ H N++ G + G D+ L DY P
Sbjct: 41 VIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPE 96
Query: 97 HSLITHLHGRLAPDCLL------------DW--HRRVS-----IAIGSAEGIA------- 130
+S + R CL W RR +A+ E I
Sbjct: 97 NSKNS---SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH 153
Query: 131 -------DIKASNVLLDTDFEAKVADFGF-AKLIPDGVTHMTTRVKGTLGYLAPEYAMWG 182
D+K SN+ L + K+ DFG L DG TR KGTL Y++PE
Sbjct: 154 SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQ 210
Query: 183 KVSDSCDVYSFGVLLLELI 201
D+Y+ G++L EL+
Sbjct: 211 DYGKEVDLYALGLILAELL 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 109
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 110 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 164
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRD 217
GT Y++PE S D++S G+ L+E+ + P+ P K D
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKED 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 37 ETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
++ +D+I++K +K + +F E++I+ +++ L G DE I+Y+YM N
Sbjct: 75 KSNNDKISIK------SKYD-DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEN 127
Query: 97 HSLITHLHGRLAPD-------------CLLDWHRRVSIAIGSAEGIA--DIKASNVLLDT 141
S++ D C++ I + + I D+K SN+L+D
Sbjct: 128 DSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK 187
Query: 142 DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD--SCDVYSFGVLL 197
+ K++DFG ++ + D + +GT ++ PE+ + D++S G+ L
Sbjct: 188 NGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL + K+ADFG A + D T V GT ++APE D+
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADI 203
Query: 191 YSFGVLLLELISAKKP 206
+S G+ +EL + P
Sbjct: 204 WSLGITAIELAKGEPP 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL RH N++G+ + Y+ +
Sbjct: 52 RVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 42 QIAVKRLK-----TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMP 95
+IAVK+L ++AK E+ +L ++H N++GL + D Y+
Sbjct: 78 KIAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 96 NHSLITHLHGRLAPDCLLDWHRRVSIA--------IGSAEGIA-DIKASNVLLDTDFEAK 146
H + L+ + L D H + I I SA+ I D+K SN+ ++ D E K
Sbjct: 135 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 194
Query: 147 VADFGFAKLIPDGVT-HMTTRVKGTLGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
+ DFG A+ D +T ++ TR Y APE + W + + D++S G ++ EL++ +
Sbjct: 195 ILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E IL +V H +++ L Y +V+D M L +L ++A L S
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRS 204
Query: 121 IAIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
I E ++ D+K N+LLD + + +++DFGF+ + G + GT
Sbjct: 205 IMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG--EKLRELCGT 262
Query: 171 LGYLAPE---------YAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GYLAPE + +GK D+++ GV+L L++ P
Sbjct: 263 PGYLAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAGSPPF 305
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 147
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T GT YLAPE + D + GV++ E++ + P
Sbjct: 148 DFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 139 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 198
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 199 WMFGVCMWEILMHGVKPFQ----GVKNNDV 224
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 138 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 197
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 198 WMFGVCMWEILMHGVKPFQ----GVKNNDV 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPD 110
L + + + E+ I + + +++G GF+ D +V + SL+ LH R
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAV 139
Query: 111 CLLDWHRRVSIAIGSAEGIA-------DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTH 162
+ + I + + D+K N+ L+ D + K+ DFG A I DG
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
T + GT Y+APE S D++S G +L L+ K P E
Sbjct: 200 KT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 109
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 110 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 164
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 200
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 201 WMFGVCMWEILMHGVKPFQ----GVKNNDV 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 133 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 192
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 193 WMFGVCMWEILMHGVKPFQ----GVKNNDV 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 40 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 99
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 100 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 152
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T GT YLAPE + D + GV++ E++ + P
Sbjct: 153 DFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG + D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 164 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 223
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 224 WMFGVCMWEILMHGVKPFQ----GVKNNDV 249
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR A + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 196 WMFGVCMWEILMHGVKPFQ----GVKNNDV 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 196 WMFGVCMWEILMHGVKPFQ----GVKNNDV 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 576 WMFGVCMWEILMHGVKPFQ----GVKNNDV 601
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 109
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 110 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 164
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 147
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T GT YLAPE + D + GV++ E++ + P
Sbjct: 148 DFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 109
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 110 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 164
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 109
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 110 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 164
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT Y++PE S D++S G+ L+E+ + P+
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 43 IAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+ + R + + AK E+ V E +L RH L L+ + D V +Y L
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 102 HL-------------HGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HL +G L H R + DIK N++LD D K+
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRDVV-------YRDIKLENLMLDKDGHIKIT 147
Query: 149 DFGFAKL-IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
DFG K I DG T GT YLAPE + D + GV++ E++ + P
Sbjct: 148 DFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 42/235 (17%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCLLDWHRRV 119
E++ L RH +++ L + + +V +Y+ L ++ HGR+ RR+
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EARRL 116
Query: 120 SIAIGSAEGIA--------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I SA D+K NVLLD AK+ADFG + ++ DG G+
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSP 174
Query: 172 GYLAPEYAMWGKV--SDSCDVYSFGVLLLELISAKKPL--EKLPGGVKRDIVQWVTPYVQ 227
Y APE + G++ D++S GV+L L+ P E +P K+ ++
Sbjct: 175 NYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---------IR 224
Query: 228 KGAFEHIADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDV--VDWLKGGL 280
G F + NR S+ + + +P R T+ D+ +W K L
Sbjct: 225 GGVF------YIPEYLNR----SVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 42 QIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
++A+K++ + + + E++IL RH N++G+ + Y+ +
Sbjct: 52 RVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 101 THLHGRLAPDCLLDWH--------RRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFG 151
T L+ L L + H R I SA + D+K SN+LL+T + K+ DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFG 171
Query: 152 FAKLI-PD-GVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
A++ PD T T T Y APE + K + S D++S G +L E++S +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ D+G A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 48/260 (18%)
Query: 43 IAVKRLKTLNAKAE-------MEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP 95
+A+K L +++ E EF EV I+ + H N++ L G +V +++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 96 NHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLDTDF 143
L L + P + W ++ + + A GI D+++ N+ L +
Sbjct: 105 CGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 144 E-----AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEY--AMWGKVSDSCDVYSFGVL 196
E AKVADF ++ H + + G ++APE A ++ D YSF ++
Sbjct: 162 ENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 197 LLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIAL 256
L +++ + P ++ G K + + + PRL+ +I L
Sbjct: 218 LYTILTGEGPFDEYSYG-KIKFINMIREEGLRPTIPEDCPPRLRN-----------VIEL 265
Query: 257 RCTDSNPENRPTMTDVVDWL 276
C +P+ RP + +V L
Sbjct: 266 -CWSGDPKKRPHFSYIVKEL 284
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRR 118
E+ I + H N++ G G+ + + +Y L + G PD +H+
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGY 173
++ + GI DIK N+LLD K++DFG A + + + ++ GTL Y
Sbjct: 115 MA-GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 174 LAPEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQW 221
+APE + ++ DV+S G++L +++ + P ++ P ++ W
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL--ITHLHGRLAPDCLLDWHRRV 119
E+++L ++G G + E I ++M SL + GR+ P+ +L +V
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILG---KV 112
Query: 120 SIAIGSAEGIA-----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
SIA+ +G+ D+K SN+L+++ E K+ DFG + + D M
Sbjct: 113 SIAV--IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFV 167
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
GT Y++PE S D++S G+ L+E+ + P
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 54/272 (19%)
Query: 42 QIAVKRLK-TLNAKAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++AVK LK T +A + E++I+ + +H N++ L G G L++ +Y L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 100 ITHL----HGRLAPDCL---------------LDWHRRVSIAIGSAEGIA---------- 130
+ L L P L+ + + A+G+A
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 182
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSD 186
D+ A NVLL AK+ DFG A+ I + ++ VKG + ++APE +
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTV 239
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPG-GVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNR 245
DV+S+G+LL E+ S L PG V + V Q +A P
Sbjct: 240 QSDVWSYGILLWEIFSLG--LNPYPGILVNSKFYKLVKDGYQ------MAQPAFAP---- 287
Query: 246 DQLKSMVLIALRCTDSNPENRPTMTDVVDWLK 277
K++ I C P +RPT + +L+
Sbjct: 288 ---KNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
A+K +K A + E+ +L +++H N++ L Y +V + L
Sbjct: 37 FALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR 96
Query: 103 LHGR---LAPDCLLDWHRRVS-IAIGSAEGIA--DIKASNVLLDTDFEAK---VADFGFA 153
+ R D L + +S + GI D+K N+L T E + DFG +
Sbjct: 97 ILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Query: 154 KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL-----E 208
K+ +G+ M+T GT GY+APE S + D +S GV+ L+ P
Sbjct: 157 KMEQNGI--MSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213
Query: 209 KLPGGVKRDIVQWVTPY 225
KL +K ++ +P+
Sbjct: 214 KLFEKIKEGYYEFESPF 230
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D KV DFG AK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D + T
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 186
Query: 172 GYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 46/211 (21%)
Query: 44 AVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
A+KR+K +K + +FA E+E+L ++ H N++ L G + +Y P+ +L+
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 102 HLHGR--LAPD----------CLLDWHRRVSIAIGSAEGI----------ADIKASNVLL 139
L L D L + + A A G+ ++ A N+L+
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV 172
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMWGKVSDSCDVYSFG 194
++ AK+ADFG ++ VK T+G ++A E + + + DV+S+G
Sbjct: 173 GENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 225
Query: 195 VLLLELIS----------AKKPLEKLPGGVK 215
VLL E++S + EKLP G +
Sbjct: 226 VLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 38 TGDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGD 85
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 19 AGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 86 ERLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVL 138
+ + +Y L + G PD +H+ ++ + GI DIK N+L
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLL 136
Query: 139 LDTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
LD K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++
Sbjct: 137 LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 197 LLELISAKKPLEKLPGGVKRDIVQW 221
L +++ + P ++ P ++ W
Sbjct: 197 LTAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 19 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 77
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 78 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 136
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 197 TAMLAGELPWDQ-PSDSCQEYSDW 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D + T
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 186
Query: 172 GYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL 176
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 235
Query: 197 LLELIS 202
+ E+ +
Sbjct: 236 MWEIFT 241
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 106
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 107 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 167 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 225 PASEISSILE 234
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D + T
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATR 182
Query: 172 GYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKV-SDSCDVYSFGV 195
+ + K+ADFG A+ I + + + G L ++APE A++ +V + DV+SFGV
Sbjct: 236 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGV 293
Query: 196 LLLELIS 202
L+ E+ +
Sbjct: 294 LMWEIFT 300
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKV-SDSCDVYSFGV 195
+ + K+ADFG A+ I + + + G L ++APE A++ +V + DV+SFGV
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKNTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGV 247
Query: 196 LLLELIS 202
L+ E+ +
Sbjct: 248 LMWEIFT 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ ++ K+ DFG ++ + D ++ K + ++APE + + + + DV
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 196 WMFGVCMWEILMHGVKPFQ----GVKNNDV 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPD 110
L + + + E+ I + + +++G GF+ D +V + SL+ LH R
Sbjct: 65 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAV 123
Query: 111 CLLDWHRRVSIAIGSAEGIA-------DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTH 162
+ + I + + D+K N+ L+ D + K+ DFG A I DG
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--E 181
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+ GT Y+APE S D++S G +L L+ K P E
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 20 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 78
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 137
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 198 TAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 39 GDDQIAVKRLKTLNAKA----EMEFAV--------EVEILGRVRHRNLLGLRGFYAGGDE 86
G+ Q+AV R+ T A A +M+ AV E+ I + H N++ G G+
Sbjct: 21 GEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI 79
Query: 87 RLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRRVSIAIGSAEGIA----DIKASNVLL 139
+ + +Y L + G PD +H+ ++ + GI DIK N+LL
Sbjct: 80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-GVVYLHGIGITHRDIKPENLLL 138
Query: 140 DTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVLL 197
D K++DFG A + + + ++ GTL Y+APE + ++ DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 198 LELISAKKPLEKLPGGVKRDIVQW 221
+++ + P ++ P ++ W
Sbjct: 199 TAMLAGELPWDQ-PSDSCQEYSDW 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 110 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 170 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 228 PASEISSILE 237
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 168 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 226 PASEISSILE 235
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 178
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 237
Query: 197 LLELIS 202
+ E+ +
Sbjct: 238 MWEIFT 243
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK + T + GT YLA
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLA 227
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH---GRLAPDCLLDWHRR 118
E+ I + H N++ G G+ + + +Y L + G PD +H+
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 119 VSIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTHMTTRVKGTLGY 173
++ + GI DIK N+LLD K++DFG A + + + ++ GTL Y
Sbjct: 114 MA-GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 174 LAPEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQW 221
+APE + ++ DV+S G++L +++ + P ++ P ++ W
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDW 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 131 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 190
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 191 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 249 PASEISSILE 258
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 173 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 231 PASEISSILE 240
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K +NV LD K+ DFG A+++ + V GT Y++PE ++ D+
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDI 199
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNR----- 245
+S G LL EL + P T + QK +A +GKF R
Sbjct: 200 WSLGCLLYELCALMPPF---------------TAFSQK----ELAGKIREGKFRRIPYRY 240
Query: 246 -DQLKSMVLIALRCTDSNPENRPTMTDVVD 274
D+L ++ L D +RP++ ++++
Sbjct: 241 SDELNEIITRMLNLKDY---HRPSVEEILE 267
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 115
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 116 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 176 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 234 PASEISSILE 243
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D + ++ TR
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR---- 209
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 210 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLD 106
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 107 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 167 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 225 PASEISSILE 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 108
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 169 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 227 PASEISSILE 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWG-KVSDSCD 189
D+K N+L+++D K+ADFG A+ V T V TL Y AP+ M K S S D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRD 217
++S G + E+I+ KPL PG D
Sbjct: 203 IWSIGCIFAEMITG-KPL--FPGVTDDD 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPD 110
L + + + E+ I + + +++G GF+ D +V + SL+ LH R
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAV 139
Query: 111 CLLDWHRRVSIAIGSAEGIA-------DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTH 162
+ + I + + D+K N+ L+ D + K+ DFG A I DG
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--E 197
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+ GT Y+APE S D++S G +L L+ K P E
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWG-KVSDSCD 189
D+K N+L+++D K+ADFG A+ V T V TL Y AP+ M K S S D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRD 217
++S G + E+I+ KPL PG D
Sbjct: 203 IWSIGCIFAEMITG-KPL--FPGVTDDD 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 169 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 227 PASEISSILE 236
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 168 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 226 PASEISSILE 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 181
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 240
Query: 197 LLELIS 202
+ E+ +
Sbjct: 241 MWEIFT 246
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 111
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 112 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 171
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 172 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 230 PASEISSILE 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 169 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 227 PASEISSILE 236
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 173 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 231 PASEISSILE 240
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 29/235 (12%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDW-HRRVS 120
EV+I +++H ++L L ++ + +V + N + +L R+ P + H
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 121 IAIG----SAEGIA--DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGY 173
I G + GI D+ SN+LL + K+ADFG A +L H T + GT Y
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 174 LAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEH 233
++PE A DV+S G + L+ + P + VK + + V + +F
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT--DTVKNTLNKVVLADYEMPSFLS 236
Query: 234 IADPRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVVD--WLKGGLGRRTKD 286
I + K ++ LR NP +R +++ V+D ++ ++KD
Sbjct: 237 I------------EAKDLIHQLLR---RNPADRLSLSSVLDHPFMSRNSSTKSKD 276
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 173 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 231 PASEISSILE 240
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + V I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S GV++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + V I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S GV++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 99
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 100 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 160 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 218 PASEISSILE 227
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 169 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 227 PASEISSILE 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D + T
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATR 206
Query: 172 GYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 193
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN--HSLITHLHGRLAPDCLLDWHRRV 119
E+ +L ++H+N++ L + +V+++ +G L P+ + + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 120 SIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+G D+K N+L++ + E K+ADFG A+ V + V TL Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRP 169
Query: 176 PEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLEKLPGG 213
P+ K+ S S D++S G + EL +A +PL PG
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPL--FPGN 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 51 LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPD 110
L + + + E+ I + + +++G GF+ D +V + SL+ LH R
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAV 139
Query: 111 CLLDWHRRVSIAIGSAEGIA-------DIKASNVLLDTDFEAKVADFGFAKLIP-DGVTH 162
+ + I + + D+K N+ L+ D + K+ DFG A I DG
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--E 197
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE 208
+ GT Y+APE S D++S G +L L+ K P E
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 102
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 103 YVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 162
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 163 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 221 PASEISSILE 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 50/192 (26%)
Query: 44 AVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL 103
+KR+K N KAE E V+ L ++ H N++ G + G +DY P S +
Sbjct: 40 VIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWDG-------FDYDPETS--SKN 86
Query: 104 HGRLAPDCLL------------DW--HRRVS-----IAIGSAEGIA-------------- 130
R CL W RR +A+ E I
Sbjct: 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINR 146
Query: 131 DIKASNVLLDTDFEAKVADFGF-AKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCD 189
D+K SN+ L + K+ DFG L DG R KGTL Y++PE D
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRXRSKGTLRYMSPEQISSQDYGKEVD 203
Query: 190 VYSFGVLLLELI 201
+Y+ G++L EL+
Sbjct: 204 LYALGLILAELL 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRR 118
E +L RH L L+ + D V +Y L HL + D +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 119 VSIAIG---SAEGIA--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLG 172
+ A+ S + + D+K N++LD D K+ DFG K I DG T T GT
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 314
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + D + GV++ E++ + P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRR 118
E +L RH L L+ + D V +Y L HL + D +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 119 VSIAIG---SAEGIA--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLG 172
+ A+ S + + D+K N++LD D K+ DFG K I DG T T GT
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 317
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + D + GV++ E++ + P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV--SDSC 188
D+K NVLLD AK+ADFG + ++ DG G+ Y APE + G++
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISGRLYAGPEV 197
Query: 189 DVYSFGVLLLELISAKKPLE 208
D++S GV+L L+ P +
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 136 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 196 WMFGVCMWEILMHGVKPFQ----GVKNNDV 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DI A NVL+ K+ DFG ++ + D + ++ K + ++APE + + + + DV
Sbjct: 516 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 191 YSFGVLLLE-LISAKKPLEKLPGGVKRDIV 219
+ FGV + E L+ KP + GVK + V
Sbjct: 576 WMFGVCMWEILMHGVKPFQ----GVKNNDV 601
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 26/184 (14%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGR-VRHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
Q A+K L + ++E + +L R + H N+L L G ++ + +P+ L
Sbjct: 51 QCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGI-------MLPPEGLPHVLLP 103
Query: 101 THLHGRL-----APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEA 145
HG L +P +S + A G+ D+ A N +LD F
Sbjct: 104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTV 163
Query: 146 KVADFGFAKLIPDGVTHMTTR---VKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS 202
KVADFG A+ I D + + + + + A E + + DV+SFGVLL EL++
Sbjct: 164 KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
Query: 203 AKKP 206
P
Sbjct: 224 RGAP 227
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y P + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D +V DFG AK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + ++
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 201
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ FG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + ++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEYLA 227
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DF A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ +Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + ++ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 110 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 169
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 170 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 228 PASEISSILE 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL + K+ DFG A+ I PD V TR+ L ++APE S
Sbjct: 224 DLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTK 281
Query: 188 CDVYSFGVLLLELIS 202
DV+S+GVLL E+ S
Sbjct: 282 SDVWSYGVLLWEIFS 296
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK E E E+++L + H N++ L G G L++ +Y L+
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 101 THLH--------GRLAPDCLLDWHRRV------SIAIGSAEGIA----------DIKASN 136
L + +P + D + S + A+G+A D+ A N
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
+LL K+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 199 ILLTHGRITKICDFGLARHIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+ L EL S P +P V + + + + EH M
Sbjct: 256 YGIFLWELFSLGSSPYPGMP--VDSKFYKMIKEGFRMLSPEHAP-------------AEM 300
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLKGGLGRRTKDV 287
I C D++P RPT +V ++ + T +
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 168 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 226 PASEISSILE 235
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SCD 189
D+K +N+LLD +++D G A H + GT GY+APE G D S D
Sbjct: 316 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSAD 372
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDI 218
+S G +L +L+ P + K +I
Sbjct: 373 WFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SCD 189
D+K +N+LLD +++D G A H + GT GY+APE G D S D
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSAD 373
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDI 218
+S G +L +L+ P + K +I
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI+ MP L+
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 168 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 226 PASEISSILE 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ D G A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+++D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 168 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 226 PASEISSILE 235
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ ++ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SCD 189
D+K +N+LLD +++D G A H + GT GY+APE G D S D
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSAD 373
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDI 218
+S G +L +L+ P + K +I
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SCD 189
D+K +N+LLD +++D G A H + GT GY+APE G D S D
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSAD 373
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDI 218
+S G +L +L+ P + K +I
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK E E E+++L + H N++ L G G L++ +Y L+
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 101 THLH--------GRLAPDCLLDWHRRV------SIAIGSAEGIA----------DIKASN 136
L + +P + D + S + A+G+A D+ A N
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 191
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
+LL K+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 192 ILLTHGRITKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+ L EL S P +P V + + + + EH M
Sbjct: 249 YGIFLWELFSLGSSPYPGMP--VDSKFYKMIKEGFRMLSPEHAP-------------AEM 293
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLKGGLGRRTKDV 287
I C D++P RPT +V ++ + T +
Sbjct: 294 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 329
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK E E E+++L + H N++ L G G L++ +Y L+
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 101 THLH--------GRLAPDCLLDWHRRV------SIAIGSAEGIA----------DIKASN 136
L + +P + D + S + A+G+A D+ A N
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
+LL K+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+ L EL S P +P V + + + + EH M
Sbjct: 233 YGIFLWELFSLGSSPYPGMP--VDSKFYKMIKEGFRMLSPEHAP-------------AEM 277
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLKGGLGRRTKDV 287
I C D++P RPT +V ++ + T +
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 313
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 27/186 (14%)
Query: 43 IAVKRLKTLNAKAEM-EFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK + ++ + E+E++ + +H+N++ L G ++ Y +L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 101 THLHGRL------------APDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+L R P+ + + VS A G+ D+ A NVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 139 LDTDFEAKVADFGFAKLIPD-GVTHMTTRVKGTLGYLAPEYAMWGKV-SDSCDVYSFGVL 196
+ + K+ADFG A+ I + TT + + ++APE A++ +V + DV+SFGVL
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVL 248
Query: 197 LLELIS 202
+ E+ +
Sbjct: 249 MWEIFT 254
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK E E E+++L + H N++ L G G L++ +Y L+
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 101 THLH--------GRLAPDCLLDWHRRV------SIAIGSAEGIA----------DIKASN 136
L + +P + D + S + A+G+A D+ A N
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 193
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
+LL K+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 194 ILLTHGRITKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+ L EL S P +P V + + + + EH M
Sbjct: 251 YGIFLWELFSLGSSPYPGMP--VDSKFYKMIKEGFRMLSPEHAP-------------AEM 295
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLKGGLGRRTKDV 287
I C D++P RPT +V ++ + T +
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 331
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 41 DQIAVKRLKTLNAKAE----MEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
+Q +KTL KAE EF E + R++H N++ L G +++ Y +
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 97 HSLITHLHGR------------------LAPDCLLDWHRRVSIAIG----SAEGIA--DI 132
L L R L P + H IA G S+ + D+
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDL 171
Query: 133 KASNVLLDTDFEAKVADFG-FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVY 191
NVL+ K++D G F ++ + + ++APE M+GK S D++
Sbjct: 172 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
Query: 192 SFGVLLLELISAKKPLEKLPGGVKRDIVQWV 222
S+GV+L E+ S L+ G +D+V+ +
Sbjct: 232 SYGVVLWEVFSYG--LQPYCGYSNQDVVEMI 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+AVK LK E E E+++L + H N++ L G G L++ +Y L+
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 101 THLH--------GRLAPDCLLDWHRRV------SIAIGSAEGIA----------DIKASN 136
L + +P + D + S + A+G+A D+ A N
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT----LGYLAPEYAMWGKVSDSCDVYS 192
+LL K+ DFG A+ I + ++ VKG + ++APE + DV+S
Sbjct: 199 ILLTHGRITKICDFGLARDIKNDSNYV---VKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
+G+ L EL S P +P V + + + + EH M
Sbjct: 256 YGIFLWELFSLGSSPYPGMP--VDSKFYKMIKEGFRMLSPEHAP-------------AEM 300
Query: 252 VLIALRCTDSNPENRPTMTDVVDWLKGGLGRRTKDV 287
I C D++P RPT +V ++ + T +
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ D G A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 165
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 166 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 224 PASEISSILE 233
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+K L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 172
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 173 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 231 PASEISSILE 240
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVIVEFCKFG 108
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 226
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 227 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 271
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 41 DQIAVKRLKTLNAKAE----MEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
+Q +KTL KAE EF E + R++H N++ L G +++ Y +
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 97 HSLITHLHGR------------------LAPDCLLDWHRRVSIAIG----SAEGIA--DI 132
L L R L P + H IA G S+ + D+
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDL 154
Query: 133 KASNVLLDTDFEAKVADFG-FAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVY 191
NVL+ K++D G F ++ + + ++APE M+GK S D++
Sbjct: 155 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
Query: 192 SFGVLLLELISAKKPLEKLPGGVKRDIVQWV 222
S+GV+L E+ S L+ G +D+V+ +
Sbjct: 215 SYGVVLWEVFSYG--LQPYCGYSNQDVVEMI 243
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVITEFCKFG 108
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 226
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 227 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 271
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ D G A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K +NV LD K+ DFG A+++ + GT Y++PE ++ D+
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 191 YSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNR----- 245
+S G LL EL + P T + QK +A +GKF R
Sbjct: 200 WSLGCLLYELCALMPPF---------------TAFSQK----ELAGKIREGKFRRIPYRY 240
Query: 246 -DQLKSMVLIALRCTDSNPENRPTMTDVVD 274
D+L ++ L D +RP++ ++++
Sbjct: 241 SDELNEIITRMLNLKDY---HRPSVEEILE 267
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVIVEFCKFG 117
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 235
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 236 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 280
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + V I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S G ++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--I 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVIVEFCKFG 117
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 235
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 236 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 280
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--I 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--I 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRG-------------FYAGGDERLIVYD 92
+K +++ E + E EI V RH N+LG E +YD
Sbjct: 36 VKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYD 95
Query: 93 YMPNHSLITHLHGRLAPD--CLLDWHRRVSI-AIGSAEGIA--DIKASNVLLDTDFEAKV 147
++ +L HL RLA C L H V I IA D K+ NVL+ ++ + +
Sbjct: 96 FLQRQTLEPHLALRLAVSAACGLA-HLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCI 154
Query: 148 ADFGFAKLIPDGVTHM----TTRVKGTLGYLAPEYAMWGKVSDSC-------DVYSFGVL 196
AD G A + G ++ RV GT Y+APE + ++ C D+++FG++
Sbjct: 155 ADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLV 212
Query: 197 LLEL 200
L E+
Sbjct: 213 LWEI 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--I 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVIVEFCKFG 154
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 272
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 273 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 317
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 318 YQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNI 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVITEFCKFG 108
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 226
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 227 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 271
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVITEFCKFG 108
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 226
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 227 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 271
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +V H N++ L Y + +++ + + L L + L+ + +
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 116 HRRVSIAIG--SAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + + IA D+K N+ LLD + K+ DFG A I DGV +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--I 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCLLDWHRRV 119
E+ +L R+ H N++ L+ + E +V + + L + G + D +++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 120 --SIAIGSAEGIA--DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLG 172
++A GI D+K N+L T D K+ADFG +K++ V T V GT G
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPG 215
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
Y APE D++S G++ L+ +P
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERL-------IVYDYMPNHSLITHLHGRLAPD--CL 112
E+ +L +RH N++GL + DE L +V +M H +L D
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTP-DETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF 132
Query: 113 LDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
L + + A GI D+K N+ ++ D E K+ DFG A+ + M V T
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-T 188
Query: 171 LGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
Y APE + W + + + D++S G ++ E+I+ K
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQ 230
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 275
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 276 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 60 AVEVEILGRVRHRNLLG-LRGFYAGGDERLIVYDYMPNHSLITHL--HGRLAPDCLLDWH 116
+E+ IL RV H N++ L F G +L++ + L + H RL
Sbjct: 77 TLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 117 RRVSIAIG--SAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG 172
R++ A+G + I DIK N+++ DF K+ DFG A + G T GT+
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIE 194
Query: 173 YLAPEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDI 218
Y APE M +++S GV L L+ + P +L V+ I
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI 241
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 50/265 (18%)
Query: 43 IAVKRLKTLNAKAEME-FAVEVEILGRVRHR----NLLGLRGFYAGGDERLIVYDYMPNH 97
+AVK LK +E E++IL + H NLLG G +++ ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG--ACTKPGGPLMVIVEFCKFG 117
Query: 98 SLITHLHGR--------LAPDCL----LDWHRRVSIAIGSAEGIA----------DIKAS 135
+L T+L + +AP+ L L + + A+G+ D+ A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 136 NVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYS 192
N+LL K+ DFG A+ I PD V R+ L ++APE + DV+S
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWS 235
Query: 193 FGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSM 251
FGVLL E+ S P GVK D + +++G D M
Sbjct: 236 FGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------YTTPEM 280
Query: 252 VLIALRCTDSNPENRPTMTDVVDWL 276
L C P RPT +++V+ L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
DIKA+NVLL + K+ADFG A + D V GT ++APE D+
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKADI 199
Query: 191 YSFGVLLLELISAKKP 206
+S G+ +EL + P
Sbjct: 200 WSLGITAIELAKGEPP 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYD-YMPNHSLITHLHGRLAPDCLLDWHRRVS 120
E+ +L ++H N++GL + D Y+ H + L+ + L D H +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 121 IA--------IGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGT 170
I I SA+ I D+K SN+ ++ D E K+ DFG A+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 171 LGYLAPEYAMWG-KVSDSCDVYSFGVLLLELISAK 204
Y APE + + + D++S G ++ EL++ +
Sbjct: 187 -WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 216 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 273
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 274 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 318
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 319 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYA----MWGKVSD 186
D+K SNVL++ + K+ DFG + + D V T G Y+APE S
Sbjct: 179 DVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPERINPELNQKGYSV 236
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNR 245
D++S G+ ++EL + P + W TP+ Q P+L KF+
Sbjct: 237 KSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPADKFSA 285
Query: 246 DQLKSMVLIALRCTDSNPENRPTMTDVV 273
+ V +C N + RPT +++
Sbjct: 286 E----FVDFTSQCLKKNSKERPTYPELM 309
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN--HSLITHLHGRLAPDCLLDWHRRV 119
E+ +L ++H+N++ L + +V+++ +G L P+ + + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 120 SIAIGSAEGIA----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+G D+K N+L++ + E K+A+FG A+ V + V TL Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRP 169
Query: 176 PEYAMWGKV-SDSCDVYSFGVLLLELISAKKPLEKLPGG 213
P+ K+ S S D++S G + EL +A +PL PG
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL--FPGN 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 43 IAVKRLK-TLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLIT 101
+A+ L+ + KA E E ++ V + ++ L G +LI MP L+
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 139
Query: 102 HLHGR---LAPDCLLDWHRRVSIAIGSAEG----IADIKASNVLLDTDFEAKVADFGFAK 154
++ + LL+W +++ + E D+ A NVL+ T K+ DFG AK
Sbjct: 140 YVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 199
Query: 155 LIPDGVTHMTTRVKG---TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELIS-AKKPLEKL 210
L+ G +G + ++A E + + DV+S+GV + EL++ KP + +
Sbjct: 200 LL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
Query: 211 PGGVKRDIVQ 220
P I++
Sbjct: 258 PASEISSILE 267
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQ 230
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 275
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 276 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 54 KAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL------HGR 106
K++ + + E+EIL R +H N++ L+ Y G +V + M L+ + R
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER 121
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIADIKASNVL-LDTDFEA---KVADFGFAKLIPDGVTH 162
A L + V D+K SN+L +D ++ DFGFAK +
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIV 219
+ T T ++APE + CD++S G+LL +++ P P +I+
Sbjct: 182 LMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 17/147 (11%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPE----YAMWGKVSD 186
DIK SN+LLD K+ DFG + + D + TR G Y+APE A
Sbjct: 151 DIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+S G+ L EL + + P K W + + Q P+L R+
Sbjct: 209 RSDVWSLGITLYELATGRFPYPK-----------WNSVFDQLTQVVKGDPPQLSNSEERE 257
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVV 273
S + C + RP +++
Sbjct: 258 FSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 218 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 275
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 276 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 320
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 48/219 (21%)
Query: 43 IAVKRLKTLNAKAEME--FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYM------ 94
+AVK LK A A+M+ F E ++ + N++ L G A G ++++YM
Sbjct: 80 VAVKMLKE-EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 95 ------PNHSLITHLHGRLAPDC--------LLDWHRRVSIAIGSAEGIA---------- 130
H++ + H L+ L ++ IA A G+A
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI-------PDGVTHMTTRVKGTLGYLAPEYAMWGK 183
D+ N L+ + K+ADFG ++ I DG + R ++ PE + +
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR------WMPPESIFYNR 252
Query: 184 VSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWV 222
+ DV+++GV+L E+ S L+ G +++ +V
Sbjct: 253 YTTESDVWAYGVVLWEIFSYG--LQPYYGMAHEEVIYYV 289
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT YLA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
P + + + D ++ GVL+ E+ + P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRR 118
E +L RH L L+ + D V +Y L HL + D +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 119 VSIAIG---SAEGIA--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLG 172
+ A+ S + + D+K N++LD D K+ DFG K I DG T GT
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPE 176
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + D + GV++ E++ + P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRR 118
E +L RH L L+ + D V +Y L HL + D +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 119 VSIAIG---SAEGIA--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLG 172
+ A+ S + + D+K N++LD D K+ DFG K I DG T GT
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPE 174
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + D + GV++ E++ + P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 225 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 282
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 283 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 327
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 328 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 61 VEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRR 118
E +L RH L L+ + D V +Y L HL + D +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 119 VSIAIG---SAEGIA--DIKASNVLLDTDFEAKVADFGFAKL-IPDGVTHMTTRVKGTLG 172
+ A+ S + + D+K N++LD D K+ DFG K I DG T GT
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPE 175
Query: 173 YLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
YLAPE + D + GV++ E++ + P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 54 KAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL------HGR 106
K++ + + E+EIL R +H N++ L+ Y G +V + M L+ + R
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER 121
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIADIKASNVL-LDTDFEA---KVADFGFAKLIPDGVTH 162
A L + V D+K SN+L +D ++ DFGFAK +
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 163 MTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIV 219
+ T T ++APE + CD++S G+LL +++ P P +I+
Sbjct: 182 LMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 223 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 280
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 281 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 325
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 326 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 169 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 226
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 271
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 272 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 232
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFCRRLKEGTRMRAPD---------Y 277
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 278 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK---VSDS 187
D+K N+LLD + DF A ++P T +TT + GT Y+APE K S +
Sbjct: 140 DMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQ 220
D +S GV EL+ ++P ++IV
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 21/150 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+ A N+LL K+ DFG A+ I PD V R+ L ++APE +
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 226
Query: 188 CDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRD 246
DV+SFGVLL E+ S P GVK D + +++G D
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYP----GVKID--EEFXRRLKEGTRMRAPD---------Y 271
Query: 247 QLKSMVLIALRCTDSNPENRPTMTDVVDWL 276
M L C P RPT +++V+ L
Sbjct: 272 TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGTLGYLAPEYAM-WGKVSDSC 188
D+K SNV ++ D E ++ DFG A+ + +T ++ TR Y APE + W + +
Sbjct: 148 DLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTV 202
Query: 189 DVYSFGVLLLELISAK 204
D++S G ++ EL+ K
Sbjct: 203 DIWSVGCIMAELLQGK 218
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN--HSLITHLHGRL----APDCLLDW 115
E+ IL ++H N++ L ++V++++ L+ G L A LL
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 116 HRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
++ D+K N+L++ + E K+ADFG A+ V T V TL Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRA 168
Query: 176 PEYAMWG-KVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRD 217
P+ M K S + D++S G + E+++ PL PG + D
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPL--FPGVSEAD 208
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGTLGYLAPEYAM-WGKVSDSC 188
D+K SNV ++ D E ++ DFG A+ + +T ++ TR Y APE + W + +
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTV 210
Query: 189 DVYSFGVLLLELISAK 204
D++S G ++ EL+ K
Sbjct: 211 DIWSVGCIMAELLQGK 226
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S G ++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVT-HMTTRVKGTLGYLAPEYAM-WGKVSDSC 188
D+K SNV ++ D E ++ DFG A+ + +T ++ TR Y APE + W + +
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTV 210
Query: 189 DVYSFGVLLLELISAK 204
D++S G ++ EL+ K
Sbjct: 211 DIWSVGCIMAELLQGK 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 54 KAEMEFAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL------HGR 106
K++ + E+EIL R +H N++ L+ Y G +V + L+ + R
Sbjct: 57 KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSER 116
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDF----EAKVADFGFAKLIPDGV 160
A L + V A+G+ D+K SN+L + ++ DFGFAK +
Sbjct: 117 EASAVLFTITKTVEYL--HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 161 THMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIV 219
+ T T ++APE +CD++S GVLL ++ P P +I+
Sbjct: 175 GLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D K+ DFG + + + M R+ GT Y+APE + K +
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRKKYDEK 217
Query: 188 CDVYSFGVLLLELISAKKPL 207
CDV+S GV+L L++ P
Sbjct: 218 CDVWSIGVILFILLAGYPPF 237
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN--HSLITHLHGRL----APDCLLDW 115
E+ IL ++H N++ L ++V++++ L+ G L A LL
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 116 HRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
++ D+K N+L++ + E K+ADFG A+ V T V TL Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRA 168
Query: 176 PEYAMWG-KVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRD 217
P+ M K S + D++S G + E+++ PL PG + D
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG-APL--FPGVSEAD 208
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S G ++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 130 ADIKASNVLLDTD-FEAKVADFGFA-KLIPDGVTH---MTTRVKGTLGYLAPEYAMWGKV 184
D+KA NVLL +D A + DFG A L PDG+ + GT ++APE +
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 185 SDSCDVYSF-------------------GVLLLELISAKKPLEKLPGGVKRDIVQWVTPY 225
DV+S G L L++ S P+ ++P Q +
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 226 VQKGAFEHIADPRLKGKFNR 245
++K ++ L GK NR
Sbjct: 329 LRKEPIHRVSAAELGGKVNR 348
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG------DERLIVYDYM-PNHSLITHL---HGRLAPDC 111
E+ ++ V H+N++GL + + IV + M N S + + H R++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + I + GI D+K SN+++ +D K+ DFG A+ G + M T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S G ++ E+I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLH--GRLAPDCLLDWHRRV 119
E IL V L+ L + +V +Y+ + +HL GR + + ++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 120 SIAIGSAEGI----ADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
+ + D+K N+L+D +V DFGFAK V T + GT LA
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALA 206
Query: 176 PEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
PE + + + D ++ GVL+ E+ + P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 39 GDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
G DQ+ VK+ E+ IL RHRN+L L + +E +++++++
Sbjct: 42 GTDQVLVKK--------------EISILNIARHRNILHLHESFESMEELVMIFEFISGLD 87
Query: 99 LITHLHG---RLAPDCLLDWHRRVSIAIGSAE----GIADIKASNVLLDTDFEA--KVAD 149
+ ++ L ++ + +V A+ G DI+ N++ T + K+ +
Sbjct: 88 IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147
Query: 150 FGFAKLIPDGVTHMTTRVKGTL-GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
FG A+ + G R+ T Y APE VS + D++S G L+ L+S P
Sbjct: 148 FGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 130 ADIKASNVLLDTD-FEAKVADFGFA-KLIPDGVTH---MTTRVKGTLGYLAPEYAMWGKV 184
D+KA NVLL +D A + DFG A L PDG+ + GT ++APE +
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 185 SDSCDVYSF-------------------GVLLLELISAKKPLEKLPGGVKRDIVQWVTPY 225
DV+S G L L++ S P+ ++P Q +
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 226 VQKGAFEHIADPRLKGKFNR 245
++K ++ L GK NR
Sbjct: 310 LRKEPIHRVSAAELGGKVNR 329
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)
Query: 42 QIAVKRLKTLNAKAEM--EFAVEVEILGRVRHRNLLGLRGF-----YAGGDERLIVYDYM 94
++AVK +K N+ EF E + H N++ L G G + +++ +M
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 95 PNHSLITHL-HGRLAP-------DCLLDWHRRVSIAIGSAEGIA-------DIKASNVLL 139
L T+L + RL LL + V IA+G E ++ D+ A N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKF--MVDIALG-MEYLSNRNFLHRDLAARNCML 180
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRV-KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLL 198
D VADFG +K I G + R+ K + ++A E + DV++FGV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 199 ELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQLKSMVLIALRC 258
E+ A + + PG ++ ++ + RLK D L + I C
Sbjct: 241 EI--ATRGMTPYPGVQNHEMYDYL-----------LHGHRLKQP--EDCLDELYEIMYSC 285
Query: 259 TDSNPENRPTMT 270
++P +RPT +
Sbjct: 286 WRTDPLDRPTFS 297
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN--HSLITHLHGRL----APDCLLDW 115
E+ IL ++H N++ L ++V++++ L+ G L A LL
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 116 HRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLA 175
++ D+K N+L++ + E K+ADFG A+ V T + TL Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRA 168
Query: 176 PEYAMWG-KVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRD 217
P+ M K S + D++S G + E+++ PL PG + D
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPL--FPGVSEAD 208
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ D A + DFG A D GTL Y APE + D+
Sbjct: 159 DVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADI 218
Query: 191 YSFGVLLLELISAKKPLE 208
Y+ +L E ++ P +
Sbjct: 219 YALTCVLYECLTGSPPYQ 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 144 DLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 202 WSVGCIMGEMVRHK 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYM 94
R+TG K L++ + + A+ E+ +L +++H NL+ L + +V++Y
Sbjct: 25 RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 95 PNHSLITHL--HGRLAPDCL---LDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKV 147
+H+++ L + R P+ L + W ++ D+K N+L+ K+
Sbjct: 85 -DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL 143
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWG-KVSDSCDVYSFGVLLLELISA 203
DFGFA+L+ + V T Y +PE + + DV++ G + EL+S
Sbjct: 144 CDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 43 IAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITH 102
IA K L+ E E AV L +++H N++ L Y G ++ + L
Sbjct: 51 IAKKALEGKEGSMENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD- 105
Query: 103 LHGRLAPDCLL---DWHRRVSIAIGSAE-----GIA--DIKASNVL---LDTDFEAKVAD 149
R+ D R + + + + GI D+K N+L LD D + ++D
Sbjct: 106 ---RIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 150 FGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
FG +K+ G T GT GY+APE S + D +S GV+ L+ P
Sbjct: 163 FGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 150 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 207
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 208 WSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 210 WSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 29/164 (17%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIV---------YDYMPNHSLITHLHG----RLA 108
E+ +L +++H N++ L Y + +V +D + T R
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 109 PDCLLDWHRRVSIAIGSAEGIA--DIKASNVLL-DTDFEAKV--ADFGFAKLIPDGVTHM 163
D + HR GI D+K N+L D E+K+ +DFG +K+ +G +
Sbjct: 130 LDAVYYLHRM---------GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV 178
Query: 164 TTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+ GT GY+APE S + D +S GV+ L+ P
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 144 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 202 WSVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 203 WSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 210 WSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 203 WSVGCIMGEMVRHK 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 131 DIKASNVLL-DTDFEA--KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+L DT + K+ DFG A+L +T GT Y+APE V+
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VFKRDVTFK 205
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
CD++S GV++ L++ P G + VQ Y + + + R D
Sbjct: 206 CDIWSAGVVMYFLLTGCLPF----TGTSLEEVQQKATYKEPN---YAVECRPLTPQAVDL 258
Query: 248 LKSMVLIALRCTDSNPENRPTMTDVV--DWLK 277
LK M+ +PE RP+ V+ +W K
Sbjct: 259 LKQML-------TKDPERRPSAAQVLHHEWFK 283
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D ++ DFG + + M ++ GT Y+APE + G +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEK 213
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+S P G + DI++ V+KG +
Sbjct: 214 CDVWSTGVILYILLSGCPPFN---GANEYDILK----KVEKGKY 250
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + + K+ADFG A++ T V TL Y APE + + D+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 203 WSVGCIFAEMFR-RKPL 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI----PDGVTHMTTRVKGTLGYLAPEYAMWGKVSD 186
D K+ NVLL +D A +ADFG A P G TH GT Y+APE + G ++
Sbjct: 148 DFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPE-VLEGAINF 203
Query: 187 S------CDVYSFGVLLLELISAKK 205
D+Y+ G++L EL+S K
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCK 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELI 201
+S G ++ E+I
Sbjct: 209 WSVGCIMGEMI 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + + K+ADFG A++ T V TL Y APE + + D+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 203 WSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + + K+ADFG A++ T V TL Y APE + + D+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 203 WSVGCIFAEMFR-RKPL 218
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELI 201
+S G ++ E+I
Sbjct: 209 WSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 191 YSFGVLLLELI 201
+S G ++ E+I
Sbjct: 210 WSVGCIMGEMI 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 247 WSVGCIMGEMVRHK 260
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 156 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 214 WSVGCIMGEMVCHK 227
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP-------NHSLITHLHGRLAPDCLLD 114
E+ +L + H N++ L ++ +V++++ + S +T + L L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 115 WHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYL 174
+ +S D+K N+L++T+ K+ADFG A+ V T V TL Y
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 175 APEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
APE + K S + D++S G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSI 121
E+ +L +++H N++ L Y G ++ + L + + D R +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASRLIFQ 124
Query: 122 AIGSAE-----GIA--DIKASNVL---LDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + + GI D+K N+L LD D + ++DFG +K+ G T GT
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--GTP 182
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GY+APE S + D +S GV+ L+ P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
EVE+L + + HRN+L L F+ D +V++ M S+++H+H R + V
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVV 116
Query: 121 IA-IGSA------EGIA--DIKASNVLLDTDFE---AKVADFGFAKLI-------PDGVT 161
+ + SA +GIA D+K N+L + + K+ DFG I P
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 162 HMTTRVKGTLGYLAPE----YAMWGKVSDS-CDVYSFGVLLLELISAKKPL 207
+ T G+ Y+APE ++ + D CD++S GV+L L+S P
Sbjct: 177 ELLTPC-GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLL---DWHRR 118
E+ +L +++H N++ L Y G ++ + L R+ D R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRL 121
Query: 119 VSIAIGSAE-----GIA--DIKASNVL---LDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
+ + + + GI D+K N+L LD D + ++DFG +K+ G + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTAC 179
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT GY+APE S + D +S GV+ L+ P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 247 WSVGCIMGEMVRHK 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPE----YAMWGKVSD 186
D+K SNVL++ + K+ DFG + + D V G Y+APE S
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQKGYSV 192
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNR 245
D++S G+ ++EL + P + W TP+ Q P+L KF+
Sbjct: 193 KSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPADKFSA 241
Query: 246 DQLKSMVLIALRCTDSNPENRPTMTDVV 273
+ V +C N + RPT +++
Sbjct: 242 E----FVDFTSQCLKKNSKERPTYPELM 265
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAG--GDERLIVYD 92
R + D + V +++ + + +F E L H N+L + G ++
Sbjct: 30 RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89
Query: 93 YMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLD 140
+MP SL LH + ++D + V A+ A G+A + + +V++D
Sbjct: 90 WMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID 147
Query: 141 TDFEAKV--ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD----SCDVYSFG 194
D A++ AD F+ P + ++APE A+ K D S D++SF
Sbjct: 148 EDMTARISMADVKFSFQSPGRMY--------APAWVAPE-ALQKKPEDTNRRSADMWSFA 198
Query: 195 VLLLELISAKKPLEKLPG----------GVKRDIVQWVTPYVQK 228
VLL EL++ + P L G++ I ++P+V K
Sbjct: 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK 242
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 202
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 203 WSVGCIMGEMVCHK 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D ++ DFG + + M ++ GT Y+APE + G +
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEK 207
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+S P G + DI++ V+KG +
Sbjct: 208 CDVWSTGVILYILLSGCPPFN---GANEYDILK----KVEKGKY 244
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D ++ DFG + + M ++ GT Y+APE + G +
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEK 231
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+S P G + DI++ V+KG +
Sbjct: 232 CDVWSTGVILYILLSGCPPFN---GANEYDILK----KVEKGKY 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 36/205 (17%)
Query: 54 KAEMEFAVEVEILGRVRHRNLLGL-------------RGFYAGGD--ERLIVYDYMPNHS 98
K E E+ +L + H N++ L FY GG+ E++I
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTD---FEAKVADFGFAKL 155
+ L+ C L H V DIK N+LL+ K+ DFG +
Sbjct: 148 AANIMKQILSGICYLHKHNIVH---------RDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 156 IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVK 215
+ R+ GT Y+APE + K ++ CDV+S GV++ L+ P G
Sbjct: 199 FSKDYK-LRDRL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP---FGGQND 252
Query: 216 RDIVQWVTP---YVQKGAFEHIADP 237
+DI++ V Y +++I+D
Sbjct: 253 QDIIKKVEKGKYYFDFNDWKNISDE 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 23/109 (21%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVK-----GTLGYLAPEYAMWG 182
D+K N+LL++ D ++ DFG + TH K GT Y+APE + G
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDKIGTAYYIAPE-VLHG 202
Query: 183 KVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
+ CDV+S GV+L L+S P G + DI++ V+KG +
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILK----KVEKGKY 244
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D ++ DFG + + M ++ GT Y+APE + G +
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEK 230
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+S P G + DI++ V+KG +
Sbjct: 231 CDVWSTGVILYILLSGCPPFN---GANEYDILK----KVEKGKY 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 6 NICFLLASPAVFIQNINNGXXXXXXXXXXRRETGDDQIAVKRLK-----TLNAKAEMEFA 60
++ F + I+ I NG RR TG Q+A+K++ NAK +
Sbjct: 47 DVTFDVGDEYEIIETIGNGAYGVVSSAR-RRLTGQ-QVAIKKIPNAFDVVTNAKRTLR-- 102
Query: 61 VEVEILGRVRHRNLLGLRGF------YAGGDERLIVYDYMPN--HSLI------THLHGR 106
E++IL +H N++ ++ Y +V D M + H +I T H R
Sbjct: 103 -ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTH 162
LL R + SA+ I D+K SN+L++ + E K+ DFG A+ + P +
Sbjct: 162 YFLYQLL----RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 163 MTTRVKGTLGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAKK 205
T T Y APE + + + + D++S G + E+++ ++
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL-- 99
++A K +KT K + E E+ ++ ++ H NL+ L + ++ ++V +Y+ L
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175
Query: 100 --ITHLHGRLAPDCLLDWHRRVSIAIGSAEGI----ADIKASNVL-LDTDF-EAKVADFG 151
I + D +L + +++ I + D+K N+L ++ D + K+ DFG
Sbjct: 176 RIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG 234
Query: 152 FAKLIPDGVTHMTTRVK-----GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKP 206
A+ R K GT +LAPE + VS D++S GV+ L+S P
Sbjct: 235 LAR-------RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
Query: 207 L 207
Sbjct: 288 F 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLL---DWHRR 118
E+ +L +++H N++ L Y G ++ + L R+ D R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD----RIVEKGFYTERDASRL 121
Query: 119 VSIAIGSAE-----GIA--DIKASNVL---LDTDFEAKVADFGFAKLIPDGVTHMTTRVK 168
+ + + + GI D+K N+L LD D + ++DFG +K+ G + +
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTAC 179
Query: 169 GTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT GY+APE S + D +S GV+ L+ P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D K+ DFG + G M R+ GT Y+APE + K +
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIAPE-VLRKKYDEK 202
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+ P G + D Q + V+KG F
Sbjct: 203 CDVWSCGVILYILLCGYPPF-----GGQTD--QEILKRVEKGKF 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELI 201
+S G ++ E+I
Sbjct: 209 WSVGCIMGEMI 219
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL++ D K+ DFG + G M R+ GT Y+APE + K +
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIAPE-VLRKKYDEK 185
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAF 231
CDV+S GV+L L+ P G + D Q + V+KG F
Sbjct: 186 CDVWSCGVILYILLCGYPPF-----GGQTD--QEILKRVEKGKF 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 6 NICFLLASPAVFIQNINNGXXXXXXXXXXRRETGDDQIAVKRLK-----TLNAKAEMEFA 60
++ F + I+ I NG RR TG Q+A+K++ NAK +
Sbjct: 48 DVTFDVGDEYEIIETIGNGAYGVVSSAR-RRLTGQ-QVAIKKIPNAFDVVTNAKRTLR-- 103
Query: 61 VEVEILGRVRHRNLLGLRGF------YAGGDERLIVYDYMPN--HSLI------THLHGR 106
E++IL +H N++ ++ Y +V D M + H +I T H R
Sbjct: 104 -ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 107 LAPDCLLDWHRRVSIAIGSAEGIA-DIKASNVLLDTDFEAKVADFGFAKLI---PDGVTH 162
LL R + SA+ I D+K SN+L++ + E K+ DFG A+ + P +
Sbjct: 163 YFLYQLL----RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 163 MTTRVKGTLGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAKK 205
T T Y APE + + + + D++S G + E+++ ++
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 191 IWSLGCIFAEMVTRR 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVD 193
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 194 IWSLGCIFAEMVT 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 35/187 (18%)
Query: 49 KTLNAKAEME---FAVEVEILGRVRHRNLLGL-RGFYAGGDERLIVYDYMPNHSLITHLH 104
K ++ K+E E + VE++IL H N++ L FY + + LI
Sbjct: 41 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----------LIEFCA 90
Query: 105 GRLAPDCLLDWHRRVS---IAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
G +L+ R ++ I + + + D+KA N+L D + K+A
Sbjct: 91 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 150
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-----SCDVYSFGVLLLELISA 203
DFG + GT ++APE M D DV+S G+ L+E+
Sbjct: 151 DFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 210
Query: 204 KKPLEKL 210
+ P +L
Sbjct: 211 EPPHHEL 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 186 IWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 187 IWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 186 IWSLGCIFAEMVT 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 186 IWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I +++H N++ L +V+D + L + R
Sbjct: 65 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEA---KVADFGFAKLIP 157
A C+ SIA + GI ++K N+LL + + K+ADFG A +
Sbjct: 125 YSEADASHCIQQILE--SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 158 DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
D + GT GYL+PE S D+++ GV+L L+ P
Sbjct: 183 D--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 193
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 194 IWSLGCIFAEMVT 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V T V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 186 IWSLGCIFAEMVT 198
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 135 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 191
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 192 AVWSLGILLYDMVCGDIPFE 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 135 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 191
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 192 AVWSLGILLYDMVCGDIPFE 211
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 24/197 (12%)
Query: 35 RRETGD------DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL 88
RRE GD ++ +K L + F ++ ++ H++L+ G GDE +
Sbjct: 29 RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88
Query: 89 IVYDYMPNHSLITHLHGRLAPDCL-LDWHRRVSIAIGSAEGI--------ADIKASNVLL 139
+V +++ SL T+L + +C+ + W V+ + +A ++ A N+LL
Sbjct: 89 LVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILL 146
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG----YLAPEYAMWGK-VSDSCDVYSFG 194
+ + K + F KL G++ +T K L ++ PE K ++ + D +SFG
Sbjct: 147 IREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFG 205
Query: 195 VLLLELIS-AKKPLEKL 210
L E+ S KPL L
Sbjct: 206 TTLWEICSGGDKPLSAL 222
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 138 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 194
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 195 AVWSLGILLYDMVCGDIPFE 214
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 135 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 191
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 192 AVWSLGILLYDMVCGDIPFE 211
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 130 ADIKASNVLLDTD-FEAKVADFGFA-KLIPDGVTHMTTR---VKGTLGYLAPEYAMWGKV 184
D+KA NVLL +D A + DFG A L PDG+ + GT ++APE M
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 185 SDSCDVYSFGVLLLELISAKKP 206
D++S ++L +++ P
Sbjct: 234 DAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 182 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 239 AVWSLGILLYDMVCGDIPFE 258
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 139 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 195
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 196 AVWSLGILLYDMVCGDIPFE 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 130 ADIKASNVLLDTD-FEAKVADFGFA-KLIPDGVTHMTTR---VKGTLGYLAPEYAMWGKV 184
D+KA NVLL +D A + DFG A L PDG+ + GT ++APE M
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 185 SDSCDVYSFGVLLLELISAKKP 206
D++S ++L +++ P
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 130 ADIKASNVLLDTD-FEAKVADFGFA-KLIPDGVTHMTTR---VKGTLGYLAPEYAMWGKV 184
D+KA NVLL +D A + DFG A L PDG+ + GT ++APE M
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 185 SDSCDVYSFGVLLLELISAKKP 206
D++S ++L +++ P
Sbjct: 250 DAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 187 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 243
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 244 AVWSLGILLYDMVCGDIPFE 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 162 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 218
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 219 AVWSLGILLYDMVCGDIPFE 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 36 RETGDDQIAVKRL--KTLNAKAEMEFAVEVEILGRVR-HRNLLGLRGFYAGGDER--LIV 90
R TG+ +AVK++ N+ E+ IL + H N++ L ++R +V
Sbjct: 31 RRTGE-VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89
Query: 91 YDYMPNHSLITHLHGRLAPDCLLDWHRRVS-------IAIGSAEGIA--DIKASNVLLDT 141
+DYM T LH + + L H++ I + G+ D+K SN+LL+
Sbjct: 90 FDYME-----TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA 144
Query: 142 DFEAKVADFGFAKL----------IPDGVTHMT----------TRVKGTLGYLAPEYAMW 181
+ KVADFG ++ IP + T T T Y APE +
Sbjct: 145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204
Query: 182 G-KVSDSCDVYSFGVLLLELISAKKPLEKLPGG 213
K + D++S G +L E++ KP+ PG
Sbjct: 205 STKYTKGIDMWSLGCILGEILCG-KPI--FPGS 234
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 174 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 230
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 231 AVWSLGILLYDMVCGDIPFE 250
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 140 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 196
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 197 AVWSLGILLYDMVCGDIPFE 216
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 182 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 239 AVWSLGILLYDMVCGDIPFE 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 139 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 195
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 196 AVWSLGILLYDMVCGDIPFE 215
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 167 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 224 AVWSLGILLYDMVCGDIPFE 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 140 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 196
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 197 AVWSLGILLYDMVCGDIPFE 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 155 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 211
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 212 AVWSLGILLYDMVCGDIPFE 231
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 167 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 224 AVWSLGILLYDMVCGDIPFE 243
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 140 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 196
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 197 AVWSLGILLYDMVCGDIPFE 216
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 155 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 211
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 212 AVWSLGILLYDMVCGDIPFE 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 155 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 211
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 212 AVWSLGILLYDMVCGDIPFE 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 168 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 225 AVWSLGILLYDMVCGDIPFE 244
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + K+ADFG A++ T V TL Y APE + + D+
Sbjct: 145 DLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLWYRAPEVLLQSTYATPVDM 202
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 203 WSVGCIFAEMFR-RKPL 218
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 167 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 224 AVWSLGILLYDMVCGDIPFE 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 154 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 210
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 211 AVWSLGILLYDMVCGDIPFE 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 167 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 223
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 224 AVWSLGILLYDMVCGDIPFE 243
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I +++H N++ L +V+D + L + R
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEA---KVADFGFAKLIP 157
A C+ SIA + GI ++K N+LL + + K+ADFG A +
Sbjct: 102 YSEADASHCIQQILE--SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 158 DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
D + GT GYL+PE S D+++ GV+L L+ P
Sbjct: 160 D--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 168 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 225 AVWSLGILLYDMVCGDIPFE 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 168 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 225 AVWSLGILLYDMVCGDIPFE 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 182 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 239 AVWSLGILLYDMVCGDIPFE 258
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I +++H N++ L +V+D + L + R
Sbjct: 41 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 100
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEA---KVADFGFAKLIP 157
A C+ SIA + GI ++K N+LL + + K+ADFG A +
Sbjct: 101 YSEADASHCIQQILE--SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158
Query: 158 DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
D + GT GYL+PE S D+++ GV+L L+ P
Sbjct: 159 D--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I +++H N++ L +V+D + L + R
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEA---KVADFGFAKLIP 157
A C+ SIA + GI ++K N+LL + + K+ADFG A +
Sbjct: 102 YSEADASHCIQQILE--SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 158 DGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
D + GT GYL+PE S D+++ GV+L L+ P
Sbjct: 160 D--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 168 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 224
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 225 AVWSLGILLYDMVCGDIPFE 244
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCD 189
D+K N+ + K+ D G A L V GT + APE K +S D
Sbjct: 156 DLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPE-XYEEKYDESVD 211
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLK 240
VY+FG LE +++ P + + I + VT V+ +F+ +A P +K
Sbjct: 212 VYAFGXCXLEXATSEYPYSECQNAAQ--IYRRVTSGVKPASFDKVAIPEVK 260
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF-EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SC 188
DIK N+L+D + E K+ DFG L+ D V T GT Y PE+ + + S
Sbjct: 154 DIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYHGRSA 210
Query: 189 DVYSFGVLLLELISAKKPLE 208
V+S G+LL +++ P E
Sbjct: 211 AVWSLGILLYDMVCGDIPFE 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T Y APE + ++ D+
Sbjct: 153 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYRAPEVILGMGYKENVDI 210
Query: 191 YSFGVLLLELI 201
+S G ++ E+I
Sbjct: 211 WSVGCIMGEMI 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +RH N++ L + + +++ + + L L + L D +
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
Query: 116 HRRV--SIAIGSAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + ++ IA D+K N+ LLD + K+ DFG A I G + +
Sbjct: 114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNI 171
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 49 KTLNAKAEME---FAVEVEILGRVRHRNLLGL-RGFYAGGDERLIVYDYMPNHSLITHLH 104
K ++ K+E E + VE++IL H N++ L FY + + LI
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----------LIEFCA 117
Query: 105 GRLAPDCLLDWHRRVS---IAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
G +L+ R ++ I + + + D+KA N+L D + K+A
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-----SCDVYSFGVLLLELISA 203
DFG + + + + GT ++APE M D DV+S G+ L+E+
Sbjct: 178 DFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 204 KKPLEKL 210
+ P +L
Sbjct: 237 EPPHHEL 243
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 49 KTLNAKAEME---FAVEVEILGRVRHRNLLGL-RGFYAGGDERLIVYDYMPNHSLITHLH 104
K ++ K+E E + VE++IL H N++ L FY + + LI
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----------LIEFCA 117
Query: 105 GRLAPDCLLDWHRRVS---IAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
G +L+ R ++ I + + + D+KA N+L D + K+A
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-----SCDVYSFGVLLLELISA 203
DFG + + + + GT ++APE M D DV+S G+ L+E+
Sbjct: 178 DFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 204 KKPLEKL 210
+ P +L
Sbjct: 237 EPPHHEL 243
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS--- 187
DIK NVLL + E K+ DFG + + V T + GT ++APE + D+
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYD 212
Query: 188 --CDVYSFGVLLLELISAKKPL 207
D++S G+ +E+ PL
Sbjct: 213 FKSDLWSLGITAIEMAEGAPPL 234
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 40/195 (20%)
Query: 40 DDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
++ +AVK + + K + EV L ++H N+L + G ++R D + L
Sbjct: 47 NEYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQ----FIGAEKRGTSVDV--DLWL 99
Query: 100 ITHLH--GRLA---PDCLLDWHRRVSIAIGSAEGIA--------------------DIKA 134
IT H G L+ ++ W+ IA A G+A DIK+
Sbjct: 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159
Query: 135 SNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK-GTLGYLAPEYAMWGKVSDS------ 187
NVLL + A +ADFG A G + T + GT Y+APE + G ++
Sbjct: 160 KNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLR 218
Query: 188 CDVYSFGVLLLELIS 202
D+Y+ G++L EL S
Sbjct: 219 IDMYAMGLVLWELAS 233
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +RH N++ L + + +++ + + L L + L D +
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 116 HRRV--SIAIGSAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + ++ IA D+K N+ LLD + K+ DFG A I G + +
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNI 178
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 58 EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDW 115
E EV IL +RH N++ L + + +++ + + L L + L D +
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
Query: 116 HRRV--SIAIGSAEGIA--DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRV 167
+++ + ++ IA D+K N+ LLD + K+ DFG A I G + +
Sbjct: 135 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNI 192
Query: 168 KGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
GT ++APE + + D++S GV+ L+S P
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 42 QIAVKRLKTLNAKAEME-FAVEVEILGRV-RHRNLLGLRGFYAGGDERLIVYDYMPNHSL 99
Q+AVK LK +E E E++++ ++ H N++ L G ++++Y L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 100 ITHLHG----------------RLAPD---CLLDWHRRVSIAIGSAEGIA---------- 130
+ +L RL + +L + + A A+G+
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196
Query: 131 DIKASNVLLDTDFEAKVADFGFAK-LIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCD 189
D+ A NVL+ K+ DFG A+ ++ D + + + ++APE G + D
Sbjct: 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
Query: 190 VYSFGVLLLELIS 202
V+S+G+LL E+ S
Sbjct: 257 VWSYGILLWEIFS 269
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 131 DIKASNVLL---DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+L + D K+ DFGFAK T Y+APE K S
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKS 190
Query: 188 CDVYSFGVLLLELISAKKPL-----EKLPGGVKRDI 218
CD++S GV++ L+ P + + G+KR I
Sbjct: 191 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 131 DIKASNVLLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+LL + + + K+ DFG ++ I G + GT YLAPE + ++ +
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPITTA 213
Query: 188 CDVYSFGVLLLELISAKKPL 207
D+++ G++ L++ P
Sbjct: 214 TDMWNIGIIAYMLLTHTSPF 233
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 131 DIKASNVLL---DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K N+L + D K+ DFGFAK T Y+APE K S
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKS 209
Query: 188 CDVYSFGVLLLELISAKKPL-----EKLPGGVKRDI 218
CD++S GV++ L+ P + + G+KR I
Sbjct: 210 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI 245
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVCHK 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 36/187 (19%)
Query: 49 KTLNAKAEME---FAVEVEILGRVRHRNLLGL-RGFYAGGDERLIVYDYMPNHSLITHLH 104
K ++ K+E E + VE++IL H N++ L FY + + LI
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----------LIEFCA 117
Query: 105 GRLAPDCLLDWHRRVS---IAIGSAEGIA-------------DIKASNVLLDTDFEAKVA 148
G +L+ R ++ I + + + D+KA N+L D + K+A
Sbjct: 118 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 149 DFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-----SCDVYSFGVLLLELISA 203
DFG + + + GT ++APE M D DV+S G+ L+E+
Sbjct: 178 DFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 204 KKPLEKL 210
+ P +L
Sbjct: 237 EPPHHEL 243
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG---DERLIVYDYM----PNHSLITHL---HGRLAPDC 111
E+ +L V H+N++ L + +E VY M N + H+ H R++
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS--- 127
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + I + GI D+K SN+++ +D K+ DFG A+ M T
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVV 185
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + ++ D++S G ++ EL+
Sbjct: 186 TRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 35 RRETGD------DQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL 88
RRE GD ++ +K L + F ++ ++ H++L+ G GDE +
Sbjct: 29 RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENI 88
Query: 89 IVYDYMPNHSLITHLHGRLAPDCL-LDWHRRVSIAIGSAEGI--------ADIKASNVLL 139
+V +++ SL T+L + +C+ + W V+ + A ++ A N+LL
Sbjct: 89 LVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILL 146
Query: 140 DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG----YLAPEYAMWGK-VSDSCDVYSFG 194
+ + K + F KL G++ +T K L ++ PE K ++ + D +SFG
Sbjct: 147 IREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFG 205
Query: 195 VLLLELIS-AKKPLEKL 210
L E+ S KPL L
Sbjct: 206 TTLWEICSGGDKPLSAL 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K SN+++ +D K+ DFG A+ G + M T Y APE + ++ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMGYKENVDL 208
Query: 191 YSFGVLLLELISAK 204
+S G ++ E++ K
Sbjct: 209 WSVGCIMGEMVCHK 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 191 IWSLGCIFAEMVT 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 62 EVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVS 120
EVE+L + + HRN+L L F+ D +V++ M S+++H+H R + V
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVV 116
Query: 121 IA-IGSA------EGIA--DIKASNVLLDTDFE---AKVADFGFAKLI-------PDGVT 161
+ + SA +GIA D+K N+L + + K+ DF I P
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 162 HMTTRVKGTLGYLAPE----YAMWGKVSDS-CDVYSFGVLLLELISAKKPL 207
+ T G+ Y+APE ++ + D CD++S GV+L L+S P
Sbjct: 177 ELLTPC-GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 190 IWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 130 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 186 IWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 197 SCDMWSLGVIMYILLCGYPPF 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 186 IWSLGCIFAEMVT 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP-------NHSLITHLHGRLAPDCLLD 114
E+ +L + H N++ L ++ +V++++ + S +T + L L
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 115 WHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYL 174
+ ++ D+K N+L++T+ K+ADFG A+ V V TL Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 171
Query: 175 APEYAMWGK-VSDSCDVYSFGVLLLELIS 202
APE + K S + D++S G + E+++
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP-------NHSLITHLHGRLAPDCLLD 114
E+ +L + H N++ L ++ +V++++ + S +T + L L
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 115 WHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYL 174
+ ++ D+K N+L++T+ K+ADFG A+ V V TL Y
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 175 APEYAMWGK-VSDSCDVYSFGVLLLELIS 202
APE + K S + D++S G + E+++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 128 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELISAK 204
++S G + E+++ +
Sbjct: 187 IWSLGCIFAEMVTRR 201
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP-------NHSLITHLHGRLAPDCLLD 114
E+ +L + H N++ L ++ +V++++ + S +T + L L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 115 WHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYL 174
+ ++ D+K N+L++T+ K+ADFG A+ V V TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 175 APEYAMWGK-VSDSCDVYSFGVLLLELIS 202
APE + K S + D++S G + E+++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCD 189
D+K N+L++T+ K+ADFG A+ V V TL Y APE + K S + D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 190 VYSFGVLLLELIS 202
++S G + E+++
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMP-------NHSLITHLHGRLAPDCLLD 114
E+ +L + H N++ L ++ +V++++ + S +T + L L
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 115 WHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYL 174
+ ++ D+K N+L++T+ K+ADFG A+ V V TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 175 APEYAMWGK-VSDSCDVYSFGVLLLELIS 202
APE + K S + D++S G + E+++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 204 SCDMWSLGVIMYILLCGYPPF 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 131 DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS-- 187
D+K SN+LLD + K+ DFG + +L+ D R G Y+APE +
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 188 ---CDVYSFGVLLLELISAKKP 206
DV+S G+ L+EL + + P
Sbjct: 207 DIRADVWSLGISLVELATGQFP 228
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 180
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAK-----------LIPDGVTHMTTRVKGTLGYLAPEYA 179
D+K SN+ D KV DFG L P T GT Y++PE
Sbjct: 143 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 180 MWGKVSDSCDVYSFGVLLLELI 201
S D++S G++L EL+
Sbjct: 203 HGNSYSHKVDIFSLGLILFELL 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + K+ADFG A++ + V TL Y APE + + D+
Sbjct: 137 DLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLLQSTYATPVDM 194
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 195 WSVGCIFAEMFR-RKPL 210
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 203 SCDMWSLGVIMYILLCGYPPF 223
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 180
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + K+ADFG A++ V TL Y APE + + D+
Sbjct: 137 DLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 195 WSVGCIFAEMFR-RKPL 210
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDY---MP----NHSLITHLHGRLAPDCLLD 114
E+ +L ++H N++GL + YD+ MP + I L L
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 115 WHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG--- 169
+ + + G+ D+K N+ ++ D E K+ DFG A+ H + G
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVV 185
Query: 170 TLGYLAPEYAM-WGKVSDSCDVYSFGVLLLELISAK 204
T Y APE + W + + D++S G ++ E+++ K
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 197 SCDMWSLGVIMYILLCGYPPF 217
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 205 SCDMWSLGVIMYILLCGYPPF 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSI 121
E+++L ++RH NL+ L +V++++ +H+++ L L P+ L D+
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDL--ELFPNGL-DYQVVQKY 129
Query: 122 AIGSAEGIA----------DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL 171
GI DIK N+L+ K+ DFGFA+ + V T
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATR 188
Query: 172 GYLAPEYAMWG-KVSDSCDVYSFGVLLLELISAKKPLEKLPG 212
Y APE + K + DV++ G L+ E+ +PL PG
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPL--FPG 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGG---DERLIVYDYM----PNHSLITHL---HGRLAPDC 111
E+ +L V H+N++ L + +E VY M N + H+ H R++
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS--- 129
Query: 112 LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
L + I + GI D+K SN+++ +D K+ DFG A+ M T
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVV 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELI 201
T Y APE + + + D++S G ++ EL+
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDF---EAKVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKG---TLGYLAPEYAM-WGKVSD 186
D+K N+ ++ D E K+ DFG A+ H + G T Y APE + W +
Sbjct: 169 DLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 187 SCDVYSFGVLLLELISAK 204
+ D++S G ++ E+++ K
Sbjct: 222 TVDIWSVGCIMAEMLTGK 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 243 SCDMWSLGVIMYILLCGYPPF 263
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 198 SCDMWSLGVIMYILLCGYPPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 199 SCDMWSLGVIMYILLCGYPPF 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 212
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 213 SCDMWSLGVIMYILLCGYPPF 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 199 SCDMWSLGVIMYILLCGYPPF 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 22/147 (14%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYA----MWGKVSD 186
D+K SNVL++ + K DFG + + D V G Y APE S
Sbjct: 162 DVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AGCKPYXAPERINPELNQKGYSV 219
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKG-KFNR 245
D++S G+ +EL + P + W TP+ Q P+L KF+
Sbjct: 220 KSDIWSLGITXIELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPADKFSA 268
Query: 246 DQLKSMVLIALRCTDSNPENRPTMTDV 272
+ V +C N + RPT ++
Sbjct: 269 E----FVDFTSQCLKKNSKERPTYPEL 291
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 248
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD++S GV++ L+ P
Sbjct: 249 SCDMWSLGVIMYILLCGYPPF 269
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K N+L+ + K+ADFG A++ V TL Y APE + + D+
Sbjct: 137 DLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 191 YSFGVLLLELISAKKPL 207
+S G + E+ +KPL
Sbjct: 195 WSVGCIFAEMFR-RKPL 210
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGR--LAPDCLLDWHRRV 119
EV IL ++H N++ L Y + +++ + + L L + L + ++ +++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 120 SIAIGSAEGIA----DIKASNV-LLDTDFEA---KVADFGFAKLIPDGVTHMTTRVKGTL 171
+ + D+K N+ LLD + K+ DFG A I G + + GT
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTP 181
Query: 172 GYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
++APE + + D++S GV+ L+S P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVK-----------GTLGYLAPEYA 179
D+K SN+ D KV DFG + T GT Y++PE
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI 248
Query: 180 MWGKVSDSCDVYSFGVLLLELISA 203
S D++S G++L EL+ +
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYS 272
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 78/282 (27%)
Query: 41 DQIAVKRLKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD----ERLIVYDYM 94
+++AVK T E + E EI V RH N+LG G + ++ DY
Sbjct: 61 EKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 95 PNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASN 136
N SL +L LD + +A S G+ D+K+ N
Sbjct: 118 ENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172
Query: 137 VLLDTDFEAKVADFGFA-KLIPDGV---THMTTRVKGTLGYLAPE-------------YA 179
+L+ + +AD G A K I D TRV GT Y+ PE Y
Sbjct: 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYI 231
Query: 180 MWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPY----VQKGAFEHIA 235
M D+YSFG++L E+ A++ + GG+ + ++ PY ++E +
Sbjct: 232 M-------ADMYSFGLILWEV--ARRCVS---GGI---VEEYQLPYHDLVPSDPSYEDMR 276
Query: 236 D--------PRLKGKFNRDQ-LKSMVLIALRCTDSNPENRPT 268
+ P +++ D+ L+ M + C NP +R T
Sbjct: 277 EIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT 318
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK---VSDS 187
DIK SN+L+ D K+ADFG + G + + GT ++APE + +
Sbjct: 162 DIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAFMAPESLSETRKIFSGKA 220
Query: 188 CDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKFNRDQ 247
DV++ GV L + + P + + + ++ A E P + +
Sbjct: 221 LDVWAMGVTLYCFVFGQCPF-------MDERIMCLHSKIKSQALEFPDQPDIA-----ED 268
Query: 248 LKSMVLIALRCTDSNPENRPTMTDV 272
LK ++ R D NPE+R + ++
Sbjct: 269 LKDLI---TRMLDKNPESRIVVPEI 290
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 131 DIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPE-------YAMWG 182
DIK N+LLD ++ADFG KL DG V GT YL+PE G
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGPGTG 245
Query: 183 KVSDSCDVYSFGVLLLELISAKKPL 207
CD ++ GV E+ + P
Sbjct: 246 SYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--------------PDGVTHMTTRVKGTLGYLAP 176
D+K N+ +D K+ DFG AK + P ++T+ + GT Y+A
Sbjct: 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVAT 199
Query: 177 EYA-MWGKVSDSCDVYSFGVLLLELI 201
E G ++ D+YS G++ E+I
Sbjct: 200 EVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--------------PDGVTHMTTRVKGTLGYLAP 176
D+K N+ +D K+ DFG AK + P ++T+ + GT Y+A
Sbjct: 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVAT 199
Query: 177 EYA-MWGKVSDSCDVYSFGVLLLELI 201
E G ++ D+YS G++ E+I
Sbjct: 200 EVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDV 190
D+K +N+ L K+ DFG L+ G +G Y+APE + G + DV
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPEL-LQGSYGTAADV 238
Query: 191 YSFGVLLLEL 200
+S G+ +LE+
Sbjct: 239 FSLGLTILEV 248
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 131 DIKASNVLLDT---DFEAKVADFGFAKLIPDGVTHMT-TRVKGTLGYLAPEYAMWGKVSD 186
D+K N+L + + K+ DFGFAK + +H + T T Y+APE K
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 187 SCDVYSFGVLLLELISAKKPL 207
SCD +S GV+ L+ P
Sbjct: 243 SCDXWSLGVIXYILLCGYPPF 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I ++H N++ L + +++D + L + R
Sbjct: 58 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 117
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEA---KVADFGFAKL 155
A C+ +++ A+ + D+K N+LL + + K+ADFG A
Sbjct: 118 YSEADASHCI----QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE 173
Query: 156 IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+ +G GT GYL+PE D+++ GV+L L+ P
Sbjct: 174 V-EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 110/269 (40%), Gaps = 51/269 (18%)
Query: 38 TGDDQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
G +AVK LK + +E+ + E +L +V H +++ L G + L++ +Y
Sbjct: 51 AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Query: 97 HSLITHLHG--RLAPDCL------------------LDWHRRVSIAIGSAEGIA------ 130
SL L ++ P L L +S A ++G+
Sbjct: 111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK 170
Query: 131 ----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTL--GYLAPEYAMWGKV 184
D+ A N+L+ + K++DFG ++ + + +++ R +G + ++A E
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIY 229
Query: 185 SDSCDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLKGKF 243
+ DV+SFGVLL E+++ P +P ++++ R++
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK--------------TGHRMERPD 275
Query: 244 NRDQLKSMVLIALRCTDSNPENRPTMTDV 272
N + M + L+C P+ RP D+
Sbjct: 276 NCSE--EMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 36 RETGDDQI-AVKRLKTLNAKAEMEFAV------EVEILGRVRHRNLLGLRGFYAGGDERL 88
R+ +QI A+K++K L ++E + + E+++L + H N++GL +
Sbjct: 30 RDKNTNQIVAIKKIK-LGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88
Query: 89 IVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA----------DIKASNVL 138
+V+D+M + L L H + + + + +G+ D+K +N+L
Sbjct: 89 LVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLM-TLQGLEYLHQHWILHRDLKPNNLL 144
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-SCDVYSFGVLL 197
LD + K+ADFG AK +V T Y APE ++ D+++ G +L
Sbjct: 145 LDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCIL 203
Query: 198 LELI 201
EL+
Sbjct: 204 AELL 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query: 59 FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL-HGRL-----APDCL 112
F E+EI+ + H N++ L + + +V + L + H R+ A +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
Query: 113 LDWHRRVSIAIGSAEGIADIKASNVLLDTDFE---AKVADFGFAKLIPDGVTHMTTRVKG 169
D V+ D+K N L TD K+ DFG A G M T+V G
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-G 187
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
T Y++P+ + G CD +S GV++ L+ P
Sbjct: 188 TPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 56/195 (28%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGDERLIVYDYMPNHS-----LI 100
+K +++ E + E E+ V RH N+LG I D HS LI
Sbjct: 36 VKIFSSRDEKSWFRETELYNTVMLRHENILGF-----------IASDMTSRHSSTQLWLI 84
Query: 101 THLH--GRLAPDCL----LDWHRRVSIAIGSAEGIA------------------DIKASN 136
TH H G L D L LD + I + A G+A D+K+ N
Sbjct: 85 THYHEMGSLY-DYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHM----TTRVKGTLGYLAPEYAMWGKVSDSC---- 188
+L+ + + +AD G A + + RV GT Y+APE + + C
Sbjct: 144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 201
Query: 189 ---DVYSFGVLLLEL 200
D+++FG++L E+
Sbjct: 202 KRVDIWAFGLVLWEV 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 38 TGDDQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
G +AVK LK + +E+ + E +L +V H +++ L G + L++ +Y
Sbjct: 51 AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Query: 97 HSLITHLHG--RLAPDCL------------------LDWHRRVSIAIGSAEGIA------ 130
SL L ++ P L L +S A ++G+
Sbjct: 111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK 170
Query: 131 ----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMW 181
D+ A N+L+ + K++DFG ++ V + VK + G ++A E
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 182 GKVSDSCDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLK 240
+ DV+SFGVLL E+++ P +P ++++ R++
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK--------------TGHRME 272
Query: 241 GKFNRDQLKSMVLIALRCTDSNPENRPTMTDV 272
N + M + L+C P+ RP D+
Sbjct: 273 RPDNCSE--EMYRLMLQCWKQEPDKRPVFADI 302
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 56/195 (28%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGDERLIVYDYMPNHS-----LI 100
+K +++ E + E E+ V RH N+LG I D HS LI
Sbjct: 36 VKIFSSRDEKSWFRETELYNTVMLRHENILGF-----------IASDMTSRHSSTQLWLI 84
Query: 101 THLH--GRLAPDCL----LDWHRRVSIAIGSAEGIA------------------DIKASN 136
TH H G L D L LD + I + A G+A D+K+ N
Sbjct: 85 THYHEMGSLY-DYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHM----TTRVKGTLGYLAPEYAMWGKVSDSC---- 188
+L+ + + +AD G A + + RV GT Y+APE + + C
Sbjct: 144 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 201
Query: 189 ---DVYSFGVLLLEL 200
D+++FG++L E+
Sbjct: 202 KRVDIWAFGLVLWEV 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query: 59 FAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL-HGRL-----APDCL 112
F E+EI+ + H N++ L + + +V + L + H R+ A +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 112
Query: 113 LDWHRRVSIAIGSAEGIADIKASNVLLDTDFE---AKVADFGFAKLIPDGVTHMTTRVKG 169
D V+ D+K N L TD K+ DFG A G M T+V G
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-G 170
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
T Y++P+ + G CD +S GV++ L+ P
Sbjct: 171 TPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 38 TGDDQIAVKRLKTLNAKAEM-EFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
G +AVK LK + +E+ + E +L +V H +++ L G + L++ +Y
Sbjct: 51 AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY 110
Query: 97 HSLITHLHG--RLAPDCL------------------LDWHRRVSIAIGSAEGIA------ 130
SL L ++ P L L +S A ++G+
Sbjct: 111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS 170
Query: 131 ----DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLG-----YLAPEYAMW 181
D+ A N+L+ + K++DFG ++ V + VK + G ++A E
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 182 GKVSDSCDVYSFGVLLLELIS-AKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADPRLK 240
+ DV+SFGVLL E+++ P +P ++++ R++
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK--------------TGHRME 272
Query: 241 GKFNRDQLKSMVLIALRCTDSNPENRPTMTDV 272
N + M + L+C P+ RP D+
Sbjct: 273 RPDNCSE--EMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 56/195 (28%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGDERLIVYDYMPNHS-----LI 100
+K +++ E + E E+ V RH N+LG I D HS LI
Sbjct: 65 VKIFSSRDEKSWFRETELYNTVMLRHENILGF-----------IASDMTSRHSSTQLWLI 113
Query: 101 THLH--GRLAPDCL----LDWHRRVSIAIGSAEGIA------------------DIKASN 136
TH H G L D L LD + I + A G+A D+K+ N
Sbjct: 114 THYHEMGSLY-DYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 172
Query: 137 VLLDTDFEAKVADFGFAKLIPDGVTHM----TTRVKGTLGYLAPEYAMWGKVSDSC---- 188
+L+ + + +AD G A + + RV GT Y+APE + + C
Sbjct: 173 ILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSY 230
Query: 189 ---DVYSFGVLLLEL 200
D+++FG++L E+
Sbjct: 231 KRVDIWAFGLVLWEV 245
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 41/224 (18%)
Query: 35 RRETGDDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAG--GDERLIVYD 92
R + D + V +++ + + +F E L H N+L + G ++
Sbjct: 30 RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89
Query: 93 YMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------DIKASNVLLD 140
+ P SL LH + ++D + V A+ A G A + + +V +D
Sbjct: 90 WXPYGSLYNVLHE--GTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXID 147
Query: 141 TDFEAKV--ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD----SCDVYSFG 194
D A++ AD F+ P G + ++APE A+ K D S D +SF
Sbjct: 148 EDXTARISXADVKFSFQSP-GRXYAP-------AWVAPE-ALQKKPEDTNRRSADXWSFA 198
Query: 195 VLLLELISAKKPLEKLPG----------GVKRDIVQWVTPYVQK 228
VLL EL++ + P L G++ I ++P+V K
Sbjct: 199 VLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSK 242
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 12/183 (6%)
Query: 36 RETGDDQIAVKRLKT--LNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDY 93
++T + A K + T L+A+ + E I ++H N++ L + +V+D
Sbjct: 52 KKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 111
Query: 94 MPNHSLITHLHGRL------APDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEA-- 145
+ L + R A C+ V+ D+K N+LL + +
Sbjct: 112 VTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAA 171
Query: 146 -KVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAK 204
K+ADFG A + G GT GYL+PE D+++ GV+L L+
Sbjct: 172 VKLADFGLAIEV-QGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGY 230
Query: 205 KPL 207
P
Sbjct: 231 PPF 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 11/180 (6%)
Query: 38 TGDDQIA-VKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
TG + A + K L+A+ + E I ++H N++ L + +V+D +
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 97 HSLITHLHGRL------APDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEA---KV 147
L + R A C+ V+ + D+K N+LL + + K+
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
ADFG A + G GT GYL+PE D+++ GV+L L+ P
Sbjct: 148 ADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I ++H N++ L + +V+D + L + R
Sbjct: 40 KKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY 99
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEA---KVADFGFAKL 155
A C+ +++ A+ + D+K N+LL + + K+ADFG A
Sbjct: 100 YSEADASHCI----QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE 155
Query: 156 IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+ G GT GYL+PE D+++ GV+L L+ P
Sbjct: 156 V-QGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 18/172 (10%)
Query: 49 KTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHLHGRL- 107
K L+A+ + E I ++H N++ L + +++D + L + R
Sbjct: 47 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 106
Query: 108 -----APDCLLDWHRRVSIAIGSAEGIA----DIKASNVLLDTDFEA---KVADFGFAKL 155
A C+ +++ A+ + ++K N+LL + + K+ADFG A
Sbjct: 107 YSEADASHCI----QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162
Query: 156 IPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
+ +G GT GYL+PE D+++ GV+L L+ P
Sbjct: 163 V-EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 11/180 (6%)
Query: 38 TGDDQIA-VKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPN 96
TG + A + K L+A+ + E I ++H N++ L + +V+D +
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 97 HSLITHLHGRL------APDCLLDWHRRVSIAIGSAEGIADIKASNVLLDTDFEA---KV 147
L + R A C+ V+ + D+K N+LL + + K+
Sbjct: 88 GELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 148 ADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPL 207
ADFG A + G GT GYL+PE D+++ GV+L L+ P
Sbjct: 148 ADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 40 DDQIAVKRLKTLNAKAEMEFAVEVEILGRVRHRNLLGLRGFYAGGDERL----------- 88
D ++A+K++ + ++ E++I+ R+ H N++ + +L
Sbjct: 36 DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95
Query: 89 ---IVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSI--------AIGSAEGIA-DIKASN 136
IV +YM T L L LL+ H R+ + I SA + D+K +N
Sbjct: 96 SVYIVQEYME-----TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 150
Query: 137 VLLDT-DFEAKVADFGFAKLIPDGVTHMTTRVKG--TLGYLAPEYAMW-GKVSDSCDVYS 192
+ ++T D K+ DFG A+++ +H +G T Y +P + + + D+++
Sbjct: 151 LFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 210
Query: 193 FGVLLLELISAK 204
G + E+++ K
Sbjct: 211 AGCIFAEMLTGK 222
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 42 QIAVKRLKTLNAKAEMEFAVEVEILGRVR-HRNLLGLRGFYAGGDERLIVYDYMPNHSLI 100
+ AVK ++ + EVE L + + ++N+L L F+ +V++ + S++
Sbjct: 40 EYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSIL 99
Query: 101 THLHG------RLAPDCLLDWHRRVSIAIG--SAEGIA--DIKASNVLLDTDFEA---KV 147
H+ R A + R V+ A+ +GIA D+K N+L ++ + K+
Sbjct: 100 AHIQKQKHFNEREASRVV----RDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKI 155
Query: 148 ADFGFAK-------LIPDGVTHMTTRVKGTLGYLAPE----YAMWGKVSDS-CDVYSFGV 195
DF P +TT G+ Y+APE + D CD++S GV
Sbjct: 156 CDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGV 214
Query: 196 LLLELISAKKPL 207
+L ++S P
Sbjct: 215 VLYIMLSGYPPF 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 40/153 (26%)
Query: 83 GGDERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------ 130
G E L+V +Y PN SL +L + DW +A G+A
Sbjct: 83 GRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 131 -------DIKASNVLLDTDFEAKVADFGFA------KLI-PDGVTHMTTRVKGTLGYLAP 176
D+ + NVL+ D ++DFG + +L+ P + GT+ Y+AP
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 177 EYAMWGKVS--------DSCDVYSFGVLLLELI 201
E + G V+ D+Y+ G++ E+
Sbjct: 198 E-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Query: 40 DDQIAVKRLKTLNAKAEMEFAV-EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHS 98
D+ +A+K ++ + + A+ EV +L ++H N++ L +V++Y+ +
Sbjct: 27 DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKD 85
Query: 99 LITHLHGRLAPDC--LLDWHRRVSIAIGSAEGIA----------DIKASNVLLDTDFEAK 146
L +L DC +++ H G+A D+K N+L++ E K
Sbjct: 86 LKQYLD-----DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELK 140
Query: 147 VADFGF--AKLIPDGVTHMTTRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISA 203
+ADFG AK IP T TL Y P+ + S D++ G + E+ +
Sbjct: 141 LADFGLARAKSIP---TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
Query: 204 KKPLEKLPGGVKRDIVQWV 222
+PL PG + + ++
Sbjct: 198 -RPL--FPGSTVEEQLHFI 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--------------PDGVTHMTTRVKGTLGYLAP 176
++K N+ +D K+ DFG AK + P ++T+ + GT Y+A
Sbjct: 141 NLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAXYVAT 199
Query: 177 EYA-MWGKVSDSCDVYSFGVLLLELI 201
E G ++ D YS G++ E I
Sbjct: 200 EVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 118 RVSIAIGSAEGIADIKASNVLLDTDFEAKVADFG-------------FAKLIPDGVTHMT 164
R+ A+GS E +A ++ ++D + A V G +A++ + M
Sbjct: 238 RLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMA 297
Query: 165 TRVKGTLGYLAPEYAM--WGKVSDSCDVYSFGVLLLE 199
+KG L L P M WG++ + D FG+ L+E
Sbjct: 298 EALKGVLSLLPPRATMYLWGRLPEGVDDLEFGLRLVE 334
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL----HGR---LAPDCL-- 112
E+ +L H N+LGLR + +E + Y+ + T L H + ++P +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 113 LDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
+H + + + G+ D+ N+LL + + + DF A+ D T
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTH 196
Query: 171 LGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
Y APE M K + D++S G ++ E+ + K
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGL--------RGFYAGGD 85
R+TG ++A+K++ N K E++IL ++H N++ L +
Sbjct: 40 RKTGQ-KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 98
Query: 86 ERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------DIKASNVL 138
+V+D+ H L L L L + R + + + I D+KA+NVL
Sbjct: 99 SIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKG---TLGYLAPEYAMWGK-VSDSCDVYSFG 194
+ D K+ADFG A+ R TL Y PE + + D++ G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 195 VLLLEL 200
++ E+
Sbjct: 218 CIMAEM 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 62 EVEILGRVRHRNLLGLRGFYAGGDERLIVYDYMPNHSLITHL----HGR---LAPDCL-- 112
E+ +L H N+LGLR + +E + Y+ + T L H + ++P +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 113 LDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGT 170
+H + + + G+ D+ N+LL + + + DF A+ D T
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTH 196
Query: 171 LGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAK 204
Y APE M K + D++S G ++ E+ + K
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 131 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADP 237
K+S DV+S G +L + K P +++ + + I DP
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------------LHAIIDP 235
Query: 238 RLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVV 273
+ +F K + + C +P+ R ++ +++
Sbjct: 236 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 135 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIADP 237
K+S DV+S G +L + K P +++ + + I DP
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------------LHAIIDP 239
Query: 238 RLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVV 273
+ +F K + + C +P+ R ++ +++
Sbjct: 240 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 151 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKR 216
K+S DV+S G +L + K P +++ + +
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGL--------RGFYAGGD 85
R+TG ++A+K++ N K E++IL ++H N++ L +
Sbjct: 40 RKTGQ-KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 98
Query: 86 ERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------DIKASNVL 138
+V+D+ H L L L L + R + + + I D+KA+NVL
Sbjct: 99 SIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKG---TLGYLAPEYAMWGK-VSDSCDVYSFG 194
+ D K+ADFG A+ R TL Y PE + + D++ G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 195 VLLLEL 200
++ E+
Sbjct: 218 CIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGL--------RGFYAGGD 85
R+TG ++A+K++ N K E++IL ++H N++ L +
Sbjct: 39 RKTGQ-KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97
Query: 86 ERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------DIKASNVL 138
+V+D+ H L L L L + R + + + I D+KA+NVL
Sbjct: 98 SIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKG---TLGYLAPEYAMWGK-VSDSCDVYSFG 194
+ D K+ADFG A+ R TL Y PE + + D++ G
Sbjct: 157 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 216
Query: 195 VLLLEL 200
++ E+
Sbjct: 217 CIMAEM 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKR 216
K+S DV+S G +L + K P +++ + +
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 132 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKR 216
K+S DV+S G +L + K P +++ + +
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 36 RETGDDQIAVKRLKTLNAKAEMEFAV--EVEILGRVRHRNLLGL--------RGFYAGGD 85
R+TG ++A+K++ N K E++IL ++H N++ L +
Sbjct: 40 RKTGQ-KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKA 98
Query: 86 ERLIVYDYMPNHSLITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA-------DIKASNVL 138
+V+D+ H L L L L + R + + + I D+KA+NVL
Sbjct: 99 SIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 139 LDTDFEAKVADFGFAKLIPDGVTHMTTRVKG---TLGYLAPEYAMWGK-VSDSCDVYSFG 194
+ D K+ADFG A+ R TL Y PE + + D++ G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 195 VLLLEL 200
++ E+
Sbjct: 218 CIMAEM 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 131 DIKASNVLL---DTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS 187
D+K NVLL + K+ DFG A + + RV GT ++APE
Sbjct: 155 DVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREPYGKP 213
Query: 188 CDVYSFGVLLLELISAKKPL 207
DV+ GV+L L+S P
Sbjct: 214 VDVWGCGVILFILLSGCLPF 233
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + GT+ Y+ PE
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKR 216
K+S DV+S G +L + K P +++ + +
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 131 DIKASNVLLDTDFE-AKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKV-SDSC 188
DIK N+L+D AK+ DFG L+ D T GT Y PE+ + +
Sbjct: 164 DIKDENILIDLRRGCAKLIDFGSGALLHD---EPYTDFDGTRVYSPPEWISRHQYHALPA 220
Query: 189 DVYSFGVLLLELISAKKPLEK 209
V+S G+LL +++ P E+
Sbjct: 221 TVWSLGILLYDMVCGDIPFER 241
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI-PDGVTHMTTRVKG-------------------- 169
D+K +N LL+ D K+ DFG A+ I D H+ ++
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 170 ---TLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAKK 205
T Y APE + + ++S D++S G + EL++ K
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLIPDGVTH-MTTRVKGTLGYLAPEYAMWGKVSDSCD 189
D+ A N +L D VADFG ++ I G + K + +LA E + D
Sbjct: 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD 221
Query: 190 VYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPY--VQKGAFEH--IADPRLKGKFNR 245
V++FGV + E+++ + TPY ++ + I RLK
Sbjct: 222 VWAFGVTMWEIMTRGQ-----------------TPYAGIENAEIYNYLIGGNRLKQP--P 262
Query: 246 DQLKSMVLIALRCTDSNPENRPTMTDVVDWLKGGLG 281
+ ++ + + +C ++P+ RP+ T + L+ LG
Sbjct: 263 ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSD-- 186
+D+K +N L+ D K+ DFG A ++ PD + GT+ Y+ PE A+ S
Sbjct: 151 SDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-AIKDMSSSRE 208
Query: 187 ----------SCDVYSFGVLLLELISAKKPLEKLPGGVKRDIVQWVTPYVQKGAFEHIAD 236
DV+S G +L + K P +++ + + I D
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------------LHAIID 254
Query: 237 PRLKGKFNRDQLKSMVLIALRCTDSNPENRPTMTDVV 273
P + +F K + + C +P+ R ++ +++
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
+ KV DFG A + H +T V T Y APE + S CDV+S G +L+E
Sbjct: 175 DIKVVDFGSATYDDE---HHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 130 ADIKASNVLL-DTDFEA------------------KVADFGFAKLIPDGVTHMTTRVKGT 170
D+K N+L +++FE +VADFG A + H TT V T
Sbjct: 156 TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIV-AT 211
Query: 171 LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
Y PE + + CDV+S G +L E
Sbjct: 212 RHYRPPEVILELGWAQPCDVWSIGCILFE 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 32/99 (32%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI-------------------PDG-------VTHMT 164
D+K +N LL+ D KV DFG A+ I P +H+
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 165 TRVKGTLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELIS 202
TR Y APE + + + S D++S G + EL++
Sbjct: 214 TR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 23/89 (25%)
Query: 130 ADIKASNVLL-DTDFE------------------AKVADFGFAKLIPDGVTHMTTRVKGT 170
D+K N+L ++D+E +V DFG A D H T + T
Sbjct: 161 TDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--DHEHHST--IVST 216
Query: 171 LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
Y APE + S CDV+S G ++ E
Sbjct: 217 RHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 130 ADIKASNVLL-DTDFEA------------------KVADFGFAKLIPDGVTHMTTRVKGT 170
D+K N+L +++FE +VADFG A + H TT V T
Sbjct: 147 TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIV-AT 202
Query: 171 LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
Y PE + + CDV+S G +L E
Sbjct: 203 RHYRPPEVILELGWAQPCDVWSIGCILFE 231
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 130 ADIKASNVLL-DTDFEA------------------KVADFGFAKLIPDGVTHMTTRVKGT 170
D+K N+L +++FE +VADFG A + H TT V T
Sbjct: 179 TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIV-AT 234
Query: 171 LGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
Y PE + + CDV+S G +L E
Sbjct: 235 RHYRPPEVILELGWAQPCDVWSIGCILFE 263
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 130 ADIKASNVLLDTDFEAKVADFGFA-KLIPDGVTHMTTRVKGTLGYLAPEY---------- 178
+D+K +N L+ D K+ DFG A ++ PD + + G + Y+ PE
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 179 -AMWGKVSDSCDVYSFGVLLLELISAKKPLEKLPGGVKR 216
K+S DV+S G +L + K P +++ + +
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 131 DIKASNVLLDTDFEAKVADFGFAKLI--PDG---------------------VTHMTTRV 167
D+K +N L++ D KV DFG A+ + P+ ++ ++
Sbjct: 181 DLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240
Query: 168 KG---TLGYLAPEYAMWGK-VSDSCDVYSFGVLLLELISAKK 205
G T Y APE + + +++ DV+S G + EL++ K
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 34 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 90
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + +A+ +A G+A D+K+ N+L+
Sbjct: 91 LFDYLNRYTVTV-----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 145
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 146 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 200
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 201 RADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 31 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 87
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + +A+ +A G+A D+K+ N+L+
Sbjct: 88 LFDYLNRYTVTV-----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 142
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 197
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 198 RADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 32 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 88
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + +A+ +A G+A D+K+ N+L+
Sbjct: 89 LFDYLNRYTVTV-----EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 143
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 144 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 198
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 199 RADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 37 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 93
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + + +A+ +A G+A D+K+ N+L+
Sbjct: 94 LFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 148
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 149 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 203
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 204 RADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 70 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 126
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + + +A+ +A G+A D+K+ N+L+
Sbjct: 127 LFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 236
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 237 RADIYAMGLVFWEI 250
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 130 ADIKASNVLLDTDFEA--KVADFGFAKLIPDGV-THMTTRVKGTLGYLAPEYAMWGKVSD 186
D+K N+LL + KV DFG + V T + +R Y APE + +
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGARYGM 278
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPG 212
D++S G +L EL++ PL LPG
Sbjct: 279 PIDMWSLGCILAELLTG-YPL--LPG 301
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 130 ADIKASNVLLDTDFEA--KVADFGFAKLIPDGV-THMTTRVKGTLGYLAPEYAMWGKVSD 186
D+K N+LL + KV DFG + V T + +R Y APE + +
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGARYGM 278
Query: 187 SCDVYSFGVLLLELISAKKPLEKLPG 212
D++S G +L EL++ PL LPG
Sbjct: 279 PIDMWSLGCILAELLTG-YPL--LPG 301
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 54/194 (27%)
Query: 48 LKTLNAKAEMEFAVEVEILGRV--RHRNLLGLRGFYAGGD-------ERLIVYDYMPNHS 98
+K +++ E + E EI V RH N+LG F A + + +V DY + S
Sbjct: 57 VKIFSSREERSWFREAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGS 113
Query: 99 LITHLHGRLAPDCLLDWHRRVSIAIGSAEGIA------------------DIKASNVLLD 140
L +L+ + + +A+ +A G+A D+K+ N+L+
Sbjct: 114 LFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 168
Query: 141 TDFEAKVADFGFA---KLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDS---------- 187
+ +AD G A D + GT Y+APE + DS
Sbjct: 169 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV-----LDDSINMKHFESFK 223
Query: 188 -CDVYSFGVLLLEL 200
D+Y+ G++ E+
Sbjct: 224 RADIYAMGLVFWEI 237
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 49/213 (23%)
Query: 116 HRRVSIAIGSAEGIADIKASNVLLD------TDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
HRR I DIK NVL++ + K+AD G A + H T ++
Sbjct: 148 HRRCGIIH------TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ- 197
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE--------------------- 208
T Y +PE + D++S L+ ELI+ E
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257
Query: 209 -KLPGGVKRDIVQWVTPYVQKGAFEHIADPRL---------KGKFNRDQLKSMVLIALRC 258
+LP + R+ T + +G +I+ + K KF++D+ K +
Sbjct: 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 317
Query: 259 TDSNPENRPTMTDVVD--WLKGGLGRRTKDVKD 289
+P R +V+ WLK LG V D
Sbjct: 318 LQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPD 350
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 49/213 (23%)
Query: 116 HRRVSIAIGSAEGIADIKASNVLLD------TDFEAKVADFGFAKLIPDGVTHMTTRVKG 169
HRR I DIK NVL++ + K+AD G A + H T ++
Sbjct: 148 HRRCGIIH------TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ- 197
Query: 170 TLGYLAPEYAMWGKVSDSCDVYSFGVLLLELISAKKPLE--------------------- 208
T Y +PE + D++S L+ ELI+ E
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257
Query: 209 -KLPGGVKRDIVQWVTPYVQKGAFEHIADPRL---------KGKFNRDQLKSMVLIALRC 258
+LP + R+ T + +G +I+ + K KF++D+ K +
Sbjct: 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 317
Query: 259 TDSNPENRPTMTDVVD--WLKGGLGRRTKDVKD 289
+P R +V+ WLK LG V D
Sbjct: 318 LQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPD 350
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 55 AEMEFAVEVEILGRVRHRNLLGLRGFYAGGDER----LIVYDYMPNHSLITHLHGRLAPD 110
E E+++L R+RH+N++ L +++ ++ Y ++ + + P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 111 C--------LLDWHRRVSIAIGSAEGIA--DIKASNVLLDTDFEAKVADFGFAKLIPDGV 160
C L+D + ++GI DIK N+LL T K++ G A+ +
Sbjct: 109 CQAHGYFCQLID-----GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 161 THMTTRV-KGTLGYLAPEYAMWGKVSD--SCDVYSFGVLLLELISAKKPLE 208
T R +G+ + PE A D++S GV L + + P E
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 144 EAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSDSCDVYSFGVLLLE 199
+ KV DFG A + H +T V Y APE + S CDV+S G +L+E
Sbjct: 175 DIKVVDFGSATYDDE---HHSTLVXXR-HYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 111 CLLDWHRRVSIAIGSAEGIADIKASN 136
C +D+H AI AE +AD+KA+N
Sbjct: 453 CHIDFHLEAGFAIVFAEDVADVKAAN 478
>pdb|3BBN|M Chain M, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 145
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 104 HGRLAPDCL------LDWHRRVSIAIGSAEGIADIKASNVLLDTDFEAKVA 148
HG L +C+ + H+RV ++ GI ++ +LLD +F+ KV
Sbjct: 39 HGGLQIECIRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFDNKVT 89
>pdb|1IW7|A Chain A, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|B Chain B, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|K Chain K, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|L Chain L, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|A Chain A, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|B Chain B, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|K Chain K, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|L Chain L, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|A Chain A, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|B Chain B, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|K Chain K, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|L Chain L, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|A Chain A, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|B Chain B, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|K Chain K, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|L Chain L, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|A Chain A, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|B Chain B, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|K Chain K, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|L Chain L, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|A Chain A, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|B Chain B, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|K Chain K, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|L Chain L, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|A Chain A, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|B Chain B, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|K Chain K, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|L Chain L, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|A Chain A, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|B Chain B, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|K Chain K, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|L Chain L, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|A Chain A, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|B Chain B, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|F Chain F, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|G Chain G, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|K Chain K, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|L Chain L, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|A Chain A, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|B Chain B, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|F Chain F, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|G Chain G, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|K Chain K, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|L Chain L, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|A Chain A, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|B Chain B, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|K Chain K, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|L Chain L, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|A Chain A, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|B Chain B, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|K Chain K, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|L Chain L, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|A Chain A, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|B Chain B, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|K Chain K, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|L Chain L, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|A Chain A, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZY|B Chain B, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|A Chain A, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|B Chain B, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 315
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 126 AEGIADIKASNVLLDTDFEAKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPE 177
AEG ++KA + L D E D A L G +M RV +GY+ E
Sbjct: 103 AEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAE 154
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,082,644
Number of Sequences: 62578
Number of extensions: 363501
Number of successful extensions: 2470
Number of sequences better than 100.0: 992
Number of HSP's better than 100.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 287
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 1067
length of query: 325
length of database: 14,973,337
effective HSP length: 99
effective length of query: 226
effective length of database: 8,778,115
effective search space: 1983853990
effective search space used: 1983853990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)