Query 046735
Match_columns 117
No_of_seqs 235 out of 1678
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 06:24:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 99.8 2.4E-21 8.1E-26 152.7 6.4 91 24-116 4-103 (356)
2 1w9y_A 1-aminocyclopropane-1-c 99.5 3.8E-15 1.3E-19 115.8 4.2 56 59-116 2-57 (319)
3 3on7_A Oxidoreductase, iron/as 99.5 9.5E-15 3.3E-19 111.7 5.0 50 59-116 2-51 (280)
4 3oox_A Putative 2OG-Fe(II) oxy 99.5 3.9E-15 1.3E-19 115.1 2.8 56 58-116 4-59 (312)
5 1odm_A Isopenicillin N synthas 99.4 5.2E-14 1.8E-18 109.7 3.0 55 58-115 6-61 (331)
6 1dcs_A Deacetoxycephalosporin 99.4 9E-14 3.1E-18 107.6 1.7 53 59-116 3-55 (311)
7 1m5a_B Insulin B chain; alpha 71.4 4.7 0.00016 20.5 2.9 19 77-95 9-27 (30)
8 3jsy_A Acidic ribosomal protei 66.7 13 0.00046 26.6 5.7 40 74-113 3-43 (213)
9 1otj_A Alpha-ketoglutarate-dep 61.0 14 0.00049 26.8 5.0 48 57-109 14-61 (283)
10 2opi_A L-fuculose-1-phosphate 56.8 5.2 0.00018 28.3 2.0 36 60-100 125-160 (212)
11 1oih_A Putative alkylsulfatase 55.7 20 0.00067 26.4 5.0 48 57-109 24-72 (301)
12 2fk5_A Fuculose-1-phosphate al 52.2 8.9 0.00031 27.0 2.5 36 60-100 117-153 (200)
13 1e4c_P L-fuculose 1-phosphate 50.5 7.7 0.00026 27.5 2.0 36 60-100 122-157 (215)
14 2j01_J 50S ribosomal protein L 50.5 36 0.0012 23.4 5.4 39 75-113 5-45 (173)
15 2dbn_A Hypothetical protein YB 50.0 3.9 0.00013 33.1 0.4 47 58-110 98-144 (461)
16 1zav_A 50S ribosomal protein L 49.7 36 0.0012 23.5 5.4 39 75-113 7-46 (180)
17 3u5i_q A0, L10E, 60S acidic ri 47.4 36 0.0012 25.9 5.4 40 74-113 6-46 (312)
18 2do1_A Nuclear protein HCC-1; 46.1 32 0.0011 19.6 3.8 29 80-111 15-43 (55)
19 3o2g_A Gamma-butyrobetaine dio 45.9 7.4 0.00025 30.2 1.3 46 60-109 122-167 (388)
20 1pvt_A Sugar-phosphate aldolas 45.3 11 0.00037 27.1 2.1 36 60-100 161-196 (238)
21 2v9l_A Rhamnulose-1-phosphate 44.8 12 0.0004 27.7 2.3 36 60-100 179-214 (274)
22 3pvj_A Alpha-ketoglutarate-dep 43.0 34 0.0012 25.0 4.6 46 57-107 12-57 (277)
23 3iz5_s 60S acidic ribosomal pr 42.1 36 0.0012 26.0 4.7 40 74-113 9-49 (319)
24 3a1y_G Acidic ribosomal protei 37.6 42 0.0014 25.0 4.4 40 74-113 6-46 (284)
25 3r1j_A Alpha-ketoglutarate-dep 37.4 64 0.0022 24.0 5.4 46 57-107 18-64 (301)
26 2rdq_A 1-deoxypentalenic acid 36.9 46 0.0016 23.8 4.4 32 81-113 22-53 (288)
27 3ocr_A Class II aldolase/adduc 36.7 17 0.00059 26.9 2.1 37 60-100 156-192 (273)
28 4h0c_A Phospholipase/carboxyle 36.0 74 0.0025 21.6 5.2 35 78-112 168-208 (210)
29 2f6u_A GGGPS, (S)-3-O-geranylg 33.8 89 0.003 22.6 5.5 39 77-115 148-192 (234)
30 3j21_k Acidic ribosomal protei 32.3 39 0.0013 25.9 3.5 39 75-113 7-46 (339)
31 2opw_A Phyhd1 protein; double- 30.8 57 0.0019 23.4 4.1 30 82-112 7-36 (291)
32 1m3u_A 3-methyl-2-oxobutanoate 30.5 73 0.0025 23.7 4.6 32 84-115 167-198 (264)
33 1zei_A Insulin, B28Asp-X-MCR; 27.9 58 0.002 18.3 2.9 19 77-95 9-27 (53)
34 4f21_A Carboxylesterase/phosph 27.1 1.2E+02 0.004 21.3 5.2 37 77-113 199-241 (246)
35 1otf_A 4-oxalocrotonate tautom 26.5 19 0.00064 19.6 0.6 29 62-90 1-30 (62)
36 1nx8_A CARC, carbapenem syntha 25.6 99 0.0034 22.0 4.6 44 57-109 15-58 (273)
37 2opa_A Probable tautomerase YW 25.5 20 0.00068 19.5 0.6 29 62-90 1-30 (61)
38 2kqp_A Insulin; carbohydrate m 25.4 30 0.001 21.3 1.4 20 77-96 9-28 (86)
39 3pnt_A NAD+-glycohydrolase; gl 25.4 70 0.0024 23.5 3.6 32 58-98 208-239 (268)
40 2fct_A Syringomycin biosynthes 25.2 97 0.0033 22.4 4.5 31 81-112 12-42 (313)
41 3sgf_H 50S ribosomal protein L 24.7 33 0.0011 23.4 1.7 39 75-113 7-46 (165)
42 3m20_A 4-oxalocrotonate tautom 24.5 33 0.0011 19.0 1.5 27 62-89 1-28 (62)
43 2irp_A Putative aldolase class 23.9 39 0.0013 23.5 2.0 35 60-100 139-176 (208)
44 1vm6_A DHPR, dihydrodipicolina 23.5 1.1E+02 0.0037 22.3 4.4 34 79-112 65-99 (228)
45 2wfu_B Probable insulin-like p 23.5 32 0.0011 16.7 1.0 15 77-92 8-22 (26)
46 3m4r_A Uncharacterized protein 23.4 31 0.0011 24.6 1.4 34 61-100 156-190 (222)
47 1oy0_A Ketopantoate hydroxymet 22.5 1.1E+02 0.0036 23.0 4.3 32 84-115 185-216 (281)
48 3vav_A 3-methyl-2-oxobutanoate 22.4 1.2E+02 0.0041 22.7 4.5 32 84-115 179-210 (275)
49 1o66_A 3-methyl-2-oxobutanoate 22.3 1E+02 0.0034 23.1 4.1 32 84-115 167-198 (275)
50 3ry0_A Putative tautomerase; o 21.9 26 0.00087 19.6 0.6 18 72-89 12-29 (65)
51 2a1x_A Phytanoyl-COA dioxygena 21.0 84 0.0029 22.8 3.4 29 84-113 28-56 (308)
52 2x4k_A 4-oxalocrotonate tautom 20.6 26 0.0009 18.8 0.4 30 61-90 3-33 (63)
53 3emr_A ECTD; double stranded b 20.5 1.1E+02 0.0039 22.5 4.1 32 81-113 37-68 (310)
54 4f3y_A DHPR, dihydrodipicolina 20.2 1.7E+02 0.0059 21.4 5.0 43 63-113 77-120 (272)
55 4fhz_A Phospholipase/carboxyle 20.1 1.5E+02 0.0051 21.4 4.6 35 78-112 222-262 (285)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=99.84 E-value=2.4e-21 Score=152.69 Aligned_cols=91 Identities=29% Similarity=0.483 Sum_probs=76.2
Q ss_pred cccHHHHHhcccCCCCCceecCCCcccCCCCCC----C----CCCcCccCCCCCCC-CCchHHHHHHHHHHHHHhcceEE
Q 046735 24 KAGVKGLVDARVAKVPRIFECEQSVVNLNSGNS----S----QLRVPTIDPEGIHK-DPNTRTEIINKVKNASEEWGFFQ 94 (117)
Q Consensus 24 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~----~----~~~iPvIDls~~~~-~~~~r~~~~~~l~~A~~~~GFf~ 94 (117)
..+||+|+++++.+||++|++|++ +++.... . ...||+|||+.+.+ ++..|.+++++|++||++|||||
T Consensus 4 ~~~v~~l~~~~~~~vP~~~~~p~~--~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 4 VERVESLAKSGIISIPKEYIRPKE--ELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCHHHHHHTTCSSCCGGGSCCHH--HHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred cccHHHHHhcCCCCCCHHhcCCch--hcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 458999999999999999999977 5553111 1 23699999999863 45568889999999999999999
Q ss_pred EEcCCCCHHHHHHHHHhhhccC
Q 046735 95 VISHGIPLSVLNDIKDGIRIPR 116 (117)
Q Consensus 95 v~nHGI~~~li~~~~~~~~~~~ 116 (117)
|+||||+.++++++++.++.-|
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF 103 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFF 103 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999987644
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.53 E-value=3.8e-15 Score=115.79 Aligned_cols=56 Identities=27% Similarity=0.595 Sum_probs=49.7
Q ss_pred CCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhhccC
Q 046735 59 LRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPR 116 (117)
Q Consensus 59 ~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~~ 116 (117)
..||+|||+.+. +..|.+++++|++||++||||||+||||+.++++++++.++.-|
T Consensus 2 ~~iPvIDls~l~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF 57 (319)
T 1w9y_A 2 ENFPIISLDKVN--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHY 57 (319)
T ss_dssp CCCCEEEGGGGG--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcccC--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 359999999875 34688899999999999999999999999999999999887644
No 3
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.51 E-value=9.5e-15 Score=111.67 Aligned_cols=50 Identities=18% Similarity=0.190 Sum_probs=43.3
Q ss_pred CCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhhccC
Q 046735 59 LRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPR 116 (117)
Q Consensus 59 ~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~~ 116 (117)
++||||||+.. ..+++|.+||++||||||+||||+.++++++++.++.-|
T Consensus 2 ~~IPvIDls~~--------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF 51 (280)
T 3on7_A 2 MKLETIDYRAA--------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFF 51 (280)
T ss_dssp --CCEEETTST--------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCCh--------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46999999853 257899999999999999999999999999999988655
No 4
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.51 E-value=3.9e-15 Score=115.12 Aligned_cols=56 Identities=11% Similarity=0.091 Sum_probs=49.5
Q ss_pred CCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhhccC
Q 046735 58 QLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPR 116 (117)
Q Consensus 58 ~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~~ 116 (117)
..+||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++.++.-|
T Consensus 4 ~~~iPvIDls~~~~---~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF 59 (312)
T 3oox_A 4 TSAIDPVSFSLYAK---DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFF 59 (312)
T ss_dssp CCSSCCEETHHHHH---CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEChHhcc---cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 34699999987742 578899999999999999999999999999999999988654
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.42 E-value=5.2e-14 Score=109.65 Aligned_cols=55 Identities=24% Similarity=0.471 Sum_probs=48.1
Q ss_pred CCCcCccCCCCCC-CCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhhcc
Q 046735 58 QLRVPTIDPEGIH-KDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIP 115 (117)
Q Consensus 58 ~~~iPvIDls~~~-~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~ 115 (117)
...||+|||+.+. ++++.|.+++++|++||++||||||+|||| +++++++.++.-
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F 61 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEF 61 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHH
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhc
Confidence 3469999999885 345678889999999999999999999999 999999988764
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.37 E-value=9e-14 Score=107.55 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=43.7
Q ss_pred CCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhhccC
Q 046735 59 LRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPR 116 (117)
Q Consensus 59 ~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~~ 116 (117)
..||+|||+.+.++ .. . ++|++||++||||||+||||+.++++++++.++.-|
T Consensus 3 ~~iPvIDls~l~~~-~~-~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF 55 (311)
T 1dcs_A 3 TTVPTFSLAELQQG-LH-Q---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFF 55 (311)
T ss_dssp CCCCEEEHHHHHTT-CS-H---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEchhhcCC-CH-H---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 36999999877421 11 1 299999999999999999999999999999987643
No 7
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=71.40 E-value=4.7 Score=20.50 Aligned_cols=19 Identities=21% Similarity=0.445 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 046735 77 TEIINKVKNASEEWGFFQV 95 (117)
Q Consensus 77 ~~~~~~l~~A~~~~GFf~v 95 (117)
.++++.|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5789999999999999974
No 8
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=66.71 E-value=13 Score=26.65 Aligned_cols=40 Identities=20% Similarity=0.348 Sum_probs=33.0
Q ss_pred chHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 74 NTRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
+.+.+.+++|.+.+.++..++|++ +|++...+.++.+..|
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 456778899999999998888887 7899999988887665
No 9
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=60.96 E-value=14 Score=26.78 Aligned_cols=48 Identities=6% Similarity=-0.018 Sum_probs=36.7
Q ss_pred CCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHH
Q 046735 57 SQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIK 109 (117)
Q Consensus 57 ~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~ 109 (117)
.+..|+-||++...+ .+...+|.+++.++|++.+.|-.++.+...++-
T Consensus 14 ~Gaei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~~~~ 61 (283)
T 1otj_A 14 IGAQISGADLTRPLS-----DNQFEQLYHAVLRHQVVFLRDQAITPQQQRALA 61 (283)
T ss_dssp SCEEEESCCSSSCCC-----HHHHHHHHHHHHHHSEEEECSCCCCHHHHHHHH
T ss_pred ceEEEECCCcCccCC-----HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH
Confidence 455688889987431 245789999999999999999999887665543
No 10
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=56.85 E-value=5.2 Score=28.35 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=26.6
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||+++..... -.++.+.+.+++.+.-.+.+-|||+
T Consensus 125 ~v~~~~y~~~g-----~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG-----SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT-----CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 57888765432 2357788888888878888999995
No 11
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=55.72 E-value=20 Score=26.38 Aligned_cols=48 Identities=2% Similarity=-0.060 Sum_probs=35.6
Q ss_pred CCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCC-CCHHHHHHHH
Q 046735 57 SQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHG-IPLSVLNDIK 109 (117)
Q Consensus 57 ~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHG-I~~~li~~~~ 109 (117)
.+..|+-||++...+ .+..++|.+++.++|++.+.|-. ++.+...++-
T Consensus 24 ~Gaei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~fRg~~~l~~~~~~~~~ 72 (301)
T 1oih_A 24 IGAEIRGVKLSPDLD-----AATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFA 72 (301)
T ss_dssp SCEEEESCCCCTTCC-----HHHHHHHHHHHHHHSEEEECCCTTCCHHHHHHHH
T ss_pred cceEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHH
Confidence 345678789986431 24578999999999999999988 8876555443
No 12
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=52.17 E-value=8.9 Score=27.01 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=26.4
Q ss_pred CcCcc-CCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTI-DPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvI-Dls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||++ ++.... -.++.+.+.+++.+.-.+.+-|||+
T Consensus 117 ~ip~~~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA-----TEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS-----SHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC-----cHHHHHHHHHHhCcCCEEEECCCCc
Confidence 58888 664332 2357778888888888899999995
No 13
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=50.49 E-value=7.7 Score=27.52 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=26.3
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||+++..... -.++++.+.+++.+.-.+.+-|||+
T Consensus 122 ~ip~~~y~~~g-----~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG-----TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT-----CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 57777765432 2356778888888878888999995
No 14
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=50.48 E-value=36 Score=23.35 Aligned_cols=39 Identities=15% Similarity=0.399 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHhcc-eEEEEc-CCCCHHHHHHHHHhhh
Q 046735 75 TRTEIINKVKNASEEWG-FFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 75 ~r~~~~~~l~~A~~~~G-Ff~v~n-HGI~~~li~~~~~~~~ 113 (117)
.+.+.+++|.+.+++.. .++|++ +|++.+.+.++....|
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 46678899999999888 666666 6899888888776554
No 15
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=49.99 E-value=3.9 Score=33.14 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=33.0
Q ss_pred CCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHH
Q 046735 58 QLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKD 110 (117)
Q Consensus 58 ~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~ 110 (117)
..-||.||++.+.++ .+.++..+.+++.|++.|.|+ ||.+......+
T Consensus 98 ~~~iP~i~f~di~~~-----~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~ 144 (461)
T 2dbn_A 98 DAVWPVLSYADIKAG-----HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQ 144 (461)
T ss_dssp CCSSCEEEHHHHHHT-----CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHH
T ss_pred CCCcceecHHHhcCC-----CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHH
Confidence 346999999866311 123455667889999999988 88887766543
No 16
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=49.69 E-value=36 Score=23.50 Aligned_cols=39 Identities=10% Similarity=0.291 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 75 TRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 75 ~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
.+.+.+++|.+.+++...++|++ +|++...+.++....|
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr 46 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLR 46 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 56778899999999999888887 5899988888776554
No 17
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=47.39 E-value=36 Score=25.87 Aligned_cols=40 Identities=15% Similarity=0.389 Sum_probs=33.3
Q ss_pred chHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 74 NTRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
+.+.+.+++|.+.+.++..++|++ +|++...+.++.+..|
T Consensus 6 e~K~~~v~el~e~l~~~~~v~vv~~~gl~v~ql~~LR~~lR 46 (312)
T 3u5i_q 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELR 46 (312)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 356778999999999998888887 7899999998887665
No 18
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=46.07 E-value=32 Score=19.59 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHh
Q 046735 80 INKVKNASEEWGFFQVISHGIPLSVLNDIKDG 111 (117)
Q Consensus 80 ~~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~ 111 (117)
+.+|...|+.+|. ---|--.+|++++...
T Consensus 15 V~eLK~~L~~rGL---~~~G~KaeLieRL~~~ 43 (55)
T 2do1_A 15 LAELKQECLARGL---ETKGIKQDLIHRLQAY 43 (55)
T ss_dssp HHHHHHHHHHHTC---CCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC---CCCCcHHHHHHHHHHH
Confidence 7788899999993 4466788899888764
No 19
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=45.92 E-value=7.4 Score=30.20 Aligned_cols=46 Identities=15% Similarity=0.197 Sum_probs=34.5
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHH
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIK 109 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~ 109 (117)
.+|-||++.+.. ..+.+.++.+++.++|++.+.|-.++.+...++-
T Consensus 122 ~~~~~~~~~~l~----~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~~~a 167 (388)
T 3o2g_A 122 QLPTLDFEDVLR----YDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLG 167 (388)
T ss_dssp CCCEEEHHHHHH----CHHHHHHHHHHHHHHSEEEEECCCSSTTHHHHHH
T ss_pred CCCccCHHHHhc----CHHHHHHHHHHHHhcCEEEEeCCCCCHHHHHHHH
Confidence 578888865431 2457789999999999999999998866555443
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=45.26 E-value=11 Score=27.15 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=26.3
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||++++.... -.++++.+.+++++.-.+.+-|||+
T Consensus 161 ~v~~~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKPG-----SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCSTT-----CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCCC-----cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 47777765331 2457778888888888889999995
No 21
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=44.83 E-value=12 Score=27.72 Aligned_cols=36 Identities=11% Similarity=-0.023 Sum_probs=26.7
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||+++..... -.++++.+.+++++.-.+.+-|||+
T Consensus 179 ~v~v~~y~~~g-----~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPG-----TDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSS-----SHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCC-----CHHHHHHHHHHHccCCEEEEcCCCc
Confidence 57777764331 2367788888888888899999995
No 22
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=43.04 E-value=34 Score=25.05 Aligned_cols=46 Identities=9% Similarity=-0.014 Sum_probs=35.3
Q ss_pred CCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHH
Q 046735 57 SQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLND 107 (117)
Q Consensus 57 ~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~ 107 (117)
.+.+|.=|||+...+ .+..++|..++.++|.+.+.|-.++.+...+
T Consensus 12 ~Gaei~gvdl~~~l~-----~~~~~~l~~~l~~~gvv~fR~q~l~~~~~~~ 57 (277)
T 3pvj_A 12 LGAQISGVDISRDIS-----AEERDAIEQALLQHQVLFLRDQPINPEQQAR 57 (277)
T ss_dssp SCEEEESCCTTSCCC-----HHHHHHHHHHHHHHSEEEESSCCCCHHHHHH
T ss_pred eeEEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECCCCCCHHHHHH
Confidence 455688889987431 3567889999999999999999998765544
No 23
>3iz5_s 60S acidic ribosomal protein P0 (L10P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_s
Probab=42.13 E-value=36 Score=25.99 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=32.9
Q ss_pred chHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 74 NTRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
+.+.+.+++|.+.+.++..++|++ +|++...++++.+..|
T Consensus 9 e~K~~~v~el~e~l~~y~~v~vv~~~gl~v~ql~~LR~~lR 49 (319)
T 3iz5_s 9 EKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLR 49 (319)
T ss_dssp CCSSHHHHHHHHHHHHCSEEEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 345678999999999998888887 7899999988887654
No 24
>3a1y_G Acidic ribosomal protein P0; stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=37.63 E-value=42 Score=24.95 Aligned_cols=40 Identities=10% Similarity=0.282 Sum_probs=30.4
Q ss_pred chHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 74 NTRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
+.+.+.+++|.+.+.++..++|++ +|++...+.++.+..|
T Consensus 6 e~K~~~v~el~~~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 46 (284)
T 3a1y_G 6 EWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIR 46 (284)
T ss_dssp CCTTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 345667888888888888877776 6888888888776544
No 25
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=37.44 E-value=64 Score=23.96 Aligned_cols=46 Identities=11% Similarity=0.012 Sum_probs=34.9
Q ss_pred CCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcC-CCCHHHHHH
Q 046735 57 SQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISH-GIPLSVLND 107 (117)
Q Consensus 57 ~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nH-GI~~~li~~ 107 (117)
.+.+|+=|||+... ..+..++|..++.++|.+.+.|- .++.+...+
T Consensus 18 iGaei~gvdl~~~L-----~d~~~~~l~~al~~~gvv~fR~q~~l~~~~~~~ 64 (301)
T 3r1j_A 18 IGARVDGVRLGGDL-----DDATVEQIRRALLTHKVIFFRHQHHLDDSRQLE 64 (301)
T ss_dssp SCEEEESCCCSTTC-----CHHHHHHHHHHHHHHSEEEECCCTTCCHHHHHH
T ss_pred ccceEeCCCccccC-----CHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH
Confidence 45568888998432 13567899999999999999998 888765544
No 26
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=36.92 E-value=46 Score=23.83 Aligned_cols=32 Identities=13% Similarity=0.319 Sum_probs=26.0
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhh
Q 046735 81 NKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113 (117)
Q Consensus 81 ~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~ 113 (117)
+++.+.+++.||+.|.|- ++.+.++++.+...
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~ 53 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMR 53 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHH
Confidence 456778999999999886 89999988877554
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=36.70 E-value=17 Score=26.95 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=26.1
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI 100 (117)
.||++|+..+. ...++.+.+.+++.+.-.+.+-|||+
T Consensus 156 ~v~~~~y~~~~----~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA----LDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS----CCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC----CCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 47777765432 12456777888888888999999994
No 28
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=35.99 E-value=74 Score=21.63 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhcce----EEE--EcCCCCHHHHHHHHHhh
Q 046735 78 EIINKVKNASEEWGF----FQV--ISHGIPLSVLNDIKDGI 112 (117)
Q Consensus 78 ~~~~~l~~A~~~~GF----f~v--~nHGI~~~li~~~~~~~ 112 (117)
+..+++.+++++.|+ ... .+|+|+.+.++.+.++.
T Consensus 168 ~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~~el~~i~~wL 208 (210)
T 4h0c_A 168 SRVQESVTILEDMNAAVSQVVYPGRPHTISGDEIQLVNNTI 208 (210)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEETCCSSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCCcCHHHHHHHHHHH
Confidence 455667777777775 222 37999999999887754
No 29
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=33.76 E-value=89 Score=22.62 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhc---ceEEEEcCCC--CHHHHHHHHHhh-hcc
Q 046735 77 TEIINKVKNASEEW---GFFQVISHGI--PLSVLNDIKDGI-RIP 115 (117)
Q Consensus 77 ~~~~~~l~~A~~~~---GFf~v~nHGI--~~~li~~~~~~~-~~~ 115 (117)
.+.++++.++.++| ||+|+..-|+ ..++++++.+.. ..|
T Consensus 148 ~e~~~~~a~~g~~~l~~~~Vyl~~~G~~~~~~~i~~i~~~~~~~P 192 (234)
T 2f6u_A 148 KELAASYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKKVLDKAR 192 (234)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHhhhhhcCCCEEEEeCCCCcchHHHHHHHHHhCCCCC
Confidence 35677888888866 9999998664 477888888877 665
No 30
>3j21_k Acidic ribosomal protein P0 homolog; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.28 E-value=39 Score=25.92 Aligned_cols=39 Identities=13% Similarity=0.300 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 75 TRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 75 ~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
.+.+.+.+|.+.+.++..++|++ +|++...+.++.+..|
T Consensus 7 ~K~~~v~el~e~l~~~~~v~v~~~~gl~v~ql~~lR~~lr 46 (339)
T 3j21_k 7 WKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIR 46 (339)
T ss_dssp CTTTHHHHHHHHHHHSSEEEEEECTTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 35567888888888888777776 6788888877776544
No 31
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=30.79 E-value=57 Score=23.40 Aligned_cols=30 Identities=10% Similarity=0.112 Sum_probs=24.3
Q ss_pred HHHHHHHhcceEEEEcCCCCHHHHHHHHHhh
Q 046735 82 KVKNASEEWGFFQVISHGIPLSVLNDIKDGI 112 (117)
Q Consensus 82 ~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~ 112 (117)
+..+.+++.||+.|.|- ++.+.++++.+..
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~ 36 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRI 36 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHH
Confidence 45667889999999886 8999998887654
No 32
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=30.52 E-value=73 Score=23.69 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=28.3
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHhhhcc
Q 046735 84 KNASEEWGFFQVISHGIPLSVLNDIKDGIRIP 115 (117)
Q Consensus 84 ~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~ 115 (117)
..++++.|-|.|+=.+++.++..++-+...+|
T Consensus 167 A~a~~eAGA~~ivlE~vp~~~a~~it~~l~iP 198 (264)
T 1m3u_A 167 ALALEAAGAQLLVLECVPVELAKRITEALAIP 198 (264)
T ss_dssp HHHHHHHTCCEEEEESCCHHHHHHHHHHCSSC
T ss_pred HHHHHHCCCcEEEEecCCHHHHHHHHHhCCCC
Confidence 46788999999999999999999888887777
No 33
>1zei_A Insulin, B28Asp-X-MCR; hormone, metabolic role, chemical activity, insulin mutant, cross-LINK, glucose metabolism, diabetes; 1.90A {Sus scrofa} SCOP: g.1.1.1 PDB: 6ins_E 1sju_A 2jzq_A
Probab=27.94 E-value=58 Score=18.30 Aligned_cols=19 Identities=21% Similarity=0.445 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhcceEEE
Q 046735 77 TEIINKVKNASEEWGFFQV 95 (117)
Q Consensus 77 ~~~~~~l~~A~~~~GFf~v 95 (117)
.++++.|...|.+.||++-
T Consensus 9 ~~L~daL~~vC~~rgf~~~ 27 (53)
T 1zei_A 9 SHLVEALYLVCGERGFFYT 27 (53)
T ss_dssp HHHHHHHHHHHGGGCEEEE
T ss_pred HHHHHHHHHHHcccCeecC
Confidence 4678889999999999865
No 34
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=27.10 E-value=1.2e+02 Score=21.29 Aligned_cols=37 Identities=16% Similarity=0.333 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcce---EEE---EcCCCCHHHHHHHHHhhh
Q 046735 77 TEIINKVKNASEEWGF---FQV---ISHGIPLSVLNDIKDGIR 113 (117)
Q Consensus 77 ~~~~~~l~~A~~~~GF---f~v---~nHGI~~~li~~~~~~~~ 113 (117)
.+..+++.+.+++.|+ |.. .+|+|+.+.++++.++.+
T Consensus 199 ~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~ 241 (246)
T 4f21_A 199 EVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIA 241 (246)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHH
Confidence 3456677777888875 333 369999999998887543
No 35
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=26.47 E-value=19 Score=19.64 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=18.9
Q ss_pred CccCCCCCCC-CCchHHHHHHHHHHHHHhc
Q 046735 62 PTIDPEGIHK-DPNTRTEIINKVKNASEEW 90 (117)
Q Consensus 62 PvIDls~~~~-~~~~r~~~~~~l~~A~~~~ 90 (117)
|+|.+..+.+ +++.+.++++.|.+++.+.
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~ 30 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANS 30 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4444432222 4667888999999888764
No 36
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.56 E-value=99 Score=21.96 Aligned_cols=44 Identities=20% Similarity=0.120 Sum_probs=32.2
Q ss_pred CCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHH
Q 046735 57 SQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIK 109 (117)
Q Consensus 57 ~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nHGI~~~li~~~~ 109 (117)
.+..|+-||++.+ . ..+|.+++.++|++.+.|-.++.+...++.
T Consensus 15 ~Ga~i~g~dl~~~-----~----~~~l~~~l~~~G~v~~rg~~~~~~~~~~~~ 58 (273)
T 1nx8_A 15 FGAYIDHRDFLEA-----K----TETIKNLLMRQGFVVVKNLDIDSDTFRDIY 58 (273)
T ss_dssp CSEEECHHHHHHS-----C----HHHHHHHHHHHCEEEECSCCCCHHHHHHHH
T ss_pred ceEEEECCCcccC-----C----HHHHHHHHHHCCEEEECCCCCCHHHHHHHH
Confidence 3445666677643 1 778899999999999999988876555543
No 37
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=25.45 E-value=20 Score=19.49 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=18.9
Q ss_pred CccCCCCCCC-CCchHHHHHHHHHHHHHhc
Q 046735 62 PTIDPEGIHK-DPNTRTEIINKVKNASEEW 90 (117)
Q Consensus 62 PvIDls~~~~-~~~~r~~~~~~l~~A~~~~ 90 (117)
|.|.+..+.+ +++.+.++++.|.+++.+.
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~ 30 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKET 30 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4444433322 4667888999999888763
No 38
>2kqp_A Insulin; carbohydrate metabolism, cleavage on PAIR of BAS residues, diabetes mellitus, disease mutation, disulfide BO glucose metabolism, hormone; NMR {Homo sapiens}
Probab=25.45 E-value=30 Score=21.28 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhcceEEEE
Q 046735 77 TEIINKVKNASEEWGFFQVI 96 (117)
Q Consensus 77 ~~~~~~l~~A~~~~GFf~v~ 96 (117)
.++++.|...|.+.|||+..
T Consensus 9 ~~L~daL~~vC~~rGf~y~~ 28 (86)
T 2kqp_A 9 SDLVEALYLVCGERGFFYTK 28 (86)
T ss_dssp HHHHHHHHHHSGGGCCCCCC
T ss_pred HHHHHHHHHHHccCCcccCC
Confidence 56889999999999998765
No 39
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=25.37 E-value=70 Score=23.52 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=24.8
Q ss_pred CCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEEcC
Q 046735 58 QLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISH 98 (117)
Q Consensus 58 ~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~nH 98 (117)
..-.|.||...+. .+.+..+.+..|+|-|+|-
T Consensus 208 ELimPSId~kgls---------~~dvLaaIe~kGYyEI~nP 239 (268)
T 3pnt_A 208 ELIFPSISVKDLK---------SKAVLAEIDAKGYFEIIDP 239 (268)
T ss_dssp CEEECEEECTTCC---------HHHHHHHHHHHSCCEEESC
T ss_pred ceeecccccCCCc---------HHHHHHHHhhcCeEEecCC
Confidence 3448999998774 4566778888999999984
No 40
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=25.22 E-value=97 Score=22.41 Aligned_cols=31 Identities=10% Similarity=0.116 Sum_probs=24.1
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHhh
Q 046735 81 NKVKNASEEWGFFQVISHGIPLSVLNDIKDGI 112 (117)
Q Consensus 81 ~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~ 112 (117)
++..+.+++.||+.|.|- ++.+.++++.+..
T Consensus 12 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~ 42 (313)
T 2fct_A 12 AEQRASFEKNGFIGPFDA-YSPEEMKETWKRT 42 (313)
T ss_dssp HHHHHHHHHHSEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEECCCC-CCHHHHHHHHHHH
Confidence 344667889999999986 7999998887543
No 41
>3sgf_H 50S ribosomal protein L10; typeii release factor binding with ribosome, ribosome-antibi complex; 3.20A {Escherichia coli} PDB: 3uos_H 3j12_J* 3j0w_J* 3j0y_J* 3j11_J* 3j0t_J* 3j14_J*
Probab=24.69 E-value=33 Score=23.42 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhhh
Q 046735 75 TRTEIINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGIR 113 (117)
Q Consensus 75 ~r~~~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~~ 113 (117)
.+.+.+++|.+.+++...+++++ +|++.+.+.++....|
T Consensus 7 ~K~~~V~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr 46 (165)
T 3sgf_H 7 DKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGR 46 (165)
T ss_dssp HHHHHHHHHHHHHSCSCEEECCCTTCCHHHHHHHTTTTTS
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 56778899999999888888887 5888888877765443
No 42
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.46 E-value=33 Score=19.02 Aligned_cols=27 Identities=22% Similarity=0.441 Sum_probs=18.2
Q ss_pred CccCCCCCCC-CCchHHHHHHHHHHHHHh
Q 046735 62 PTIDPEGIHK-DPNTRTEIINKVKNASEE 89 (117)
Q Consensus 62 PvIDls~~~~-~~~~r~~~~~~l~~A~~~ 89 (117)
|+|.+.. .+ +.+++.++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 4444433 32 567888899999988765
No 43
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=23.91 E-value=39 Score=23.51 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=24.8
Q ss_pred CcCccCCCCCCCCCchHHHHHHHHHHHHHhcc---eEEEEcCCC
Q 046735 60 RVPTIDPEGIHKDPNTRTEIINKVKNASEEWG---FFQVISHGI 100 (117)
Q Consensus 60 ~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~G---Ff~v~nHGI 100 (117)
.||+++.. ....++++.+.+++.+.+ .+.+-|||+
T Consensus 139 ~vp~~~~~------~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE------QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC------SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC------CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 46776542 124567888888888765 788889995
No 44
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=23.51 E-value=1.1e+02 Score=22.29 Aligned_cols=34 Identities=9% Similarity=0.083 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhcceEEEEc-CCCCHHHHHHHHHhh
Q 046735 79 IINKVKNASEEWGFFQVIS-HGIPLSVLNDIKDGI 112 (117)
Q Consensus 79 ~~~~l~~A~~~~GFf~v~n-HGI~~~li~~~~~~~ 112 (117)
.+....+.|.+.|-=.|++ .|.+++.++.+.+++
T Consensus 65 a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a 99 (228)
T 1vm6_A 65 ALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELS 99 (228)
T ss_dssp GHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHH
Confidence 3445555566666666665 366666665555543
No 45
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=23.50 E-value=32 Score=16.69 Aligned_cols=15 Identities=20% Similarity=0.556 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhcce
Q 046735 77 TEIINKVKNASEEWGF 92 (117)
Q Consensus 77 ~~~~~~l~~A~~~~GF 92 (117)
.++.+.|...|.+ ||
T Consensus 8 ~~L~eaL~~vC~~-GF 22 (26)
T 2wfu_B 8 PALMDMLRVACPN-GF 22 (26)
T ss_dssp HHHHHHHHHHCSS-CC
T ss_pred HHHHHHHHHHHhc-cC
Confidence 4678888899987 87
No 46
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=23.37 E-value=31 Score=24.62 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=24.6
Q ss_pred cCccCCCCCCCCCchHHHHHHHHHHHHHhc-ceEEEEcCCC
Q 046735 61 VPTIDPEGIHKDPNTRTEIINKVKNASEEW-GFFQVISHGI 100 (117)
Q Consensus 61 iPvIDls~~~~~~~~r~~~~~~l~~A~~~~-GFf~v~nHGI 100 (117)
||++++... .. ++.+.+.+++.+. -.+.+-|||+
T Consensus 156 v~~~~y~~~----g~--ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPP----GF--TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCS----SH--HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCC----cH--HHHHHHHHHHhcCCCEEEECCCCC
Confidence 777776533 22 6778888888754 6788999994
No 47
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=22.53 E-value=1.1e+02 Score=23.02 Aligned_cols=32 Identities=28% Similarity=0.421 Sum_probs=28.3
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHhhhcc
Q 046735 84 KNASEEWGFFQVISHGIPLSVLNDIKDGIRIP 115 (117)
Q Consensus 84 ~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~ 115 (117)
..|+++.|-|.|+=.+++.++..++-+...+|
T Consensus 185 A~a~~eAGA~~ivlE~vp~~~a~~it~~l~iP 216 (281)
T 1oy0_A 185 AIAVAEAGAFAVVMEMVPAELATQITGKLTIP 216 (281)
T ss_dssp HHHHHHHTCSEEEEESCCHHHHHHHHHHCSSC
T ss_pred HHHHHHcCCcEEEEecCCHHHHHHHHHhCCCC
Confidence 46788999999999999999999988887777
No 48
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=22.38 E-value=1.2e+02 Score=22.68 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=28.3
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHhhhcc
Q 046735 84 KNASEEWGFFQVISHGIPLSVLNDIKDGIRIP 115 (117)
Q Consensus 84 ~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~ 115 (117)
..++++.|-|.|+=-+|+.+++.++-+...+|
T Consensus 179 A~a~~eAGA~~ivlE~vp~~~a~~It~~l~iP 210 (275)
T 3vav_A 179 ARAVEEAGAQLIVLEAVPTLVAAEVTRELSIP 210 (275)
T ss_dssp HHHHHHHTCSEEEEESCCHHHHHHHHHHCSSC
T ss_pred HHHHHHcCCCEEEecCCCHHHHHHHHHhCCCC
Confidence 46688999999999999999999988887777
No 49
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=22.28 E-value=1e+02 Score=23.12 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=28.4
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHhhhcc
Q 046735 84 KNASEEWGFFQVISHGIPLSVLNDIKDGIRIP 115 (117)
Q Consensus 84 ~~A~~~~GFf~v~nHGI~~~li~~~~~~~~~~ 115 (117)
..|+++.|-|.|+=.+++.++..++-+...+|
T Consensus 167 A~a~~eAGA~~ivlE~vp~~~a~~it~~l~iP 198 (275)
T 1o66_A 167 AKAHDDAGAAVVLMECVLAELAKKVTETVSCP 198 (275)
T ss_dssp HHHHHHTTCSEEEEESCCHHHHHHHHHHCSSC
T ss_pred HHHHHHcCCcEEEEecCCHHHHHHHHHhCCCC
Confidence 46788999999999999999999988887777
No 50
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=21.93 E-value=26 Score=19.61 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=14.7
Q ss_pred CCchHHHHHHHHHHHHHh
Q 046735 72 DPNTRTEIINKVKNASEE 89 (117)
Q Consensus 72 ~~~~r~~~~~~l~~A~~~ 89 (117)
+++.+.++++.|.+++.+
T Consensus 12 s~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 12 SPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 566788899999988876
No 51
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=21.02 E-value=84 Score=22.76 Aligned_cols=29 Identities=17% Similarity=0.364 Sum_probs=23.0
Q ss_pred HHHHHhcceEEEEcCCCCHHHHHHHHHhhh
Q 046735 84 KNASEEWGFFQVISHGIPLSVLNDIKDGIR 113 (117)
Q Consensus 84 ~~A~~~~GFf~v~nHGI~~~li~~~~~~~~ 113 (117)
.+.+++.||+.|.|- ++.+.++++.+...
T Consensus 28 ~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~ 56 (308)
T 2a1x_A 28 RKFYEENGFLVIKNL-VPDADIQRFRNEFE 56 (308)
T ss_dssp HHHHHHHSEEEETTC-SCHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEccCC-CCHHHHHHHHHHHH
Confidence 456888999999876 89999988877543
No 52
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=20.64 E-value=26 Score=18.84 Aligned_cols=30 Identities=13% Similarity=0.301 Sum_probs=20.2
Q ss_pred cCccCCCCCCC-CCchHHHHHHHHHHHHHhc
Q 046735 61 VPTIDPEGIHK-DPNTRTEIINKVKNASEEW 90 (117)
Q Consensus 61 iPvIDls~~~~-~~~~r~~~~~~l~~A~~~~ 90 (117)
-|.|.+..+.+ +++.+.+++++|.+++.+.
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46666643332 4556888899999888764
No 53
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=20.48 E-value=1.1e+02 Score=22.51 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=24.8
Q ss_pred HHHHHHHHhcceEEEEcCCCCHHHHHHHHHhhh
Q 046735 81 NKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113 (117)
Q Consensus 81 ~~l~~A~~~~GFf~v~nHGI~~~li~~~~~~~~ 113 (117)
++-.+.+++.||+.|.|- ++.+.++.+.+...
T Consensus 37 ~eqi~~f~~dGyvvi~~~-ls~eev~~lr~~i~ 68 (310)
T 3emr_A 37 KEQLDSYEKNGFLQIKNF-FSEDEVIDMQKAIF 68 (310)
T ss_dssp HHHHHHHHHHSEEEETTC-SCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEccCC-CCHHHHHHHHHHHH
Confidence 344567899999988876 89999988877653
No 54
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.19 E-value=1.7e+02 Score=21.35 Aligned_cols=43 Identities=16% Similarity=0.016 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCchHHHHHHHHHHHHHhcceEEEE-cCCCCHHHHHHHHHhhh
Q 046735 63 TIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVI-SHGIPLSVLNDIKDGIR 113 (117)
Q Consensus 63 vIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~v~-nHGI~~~li~~~~~~~~ 113 (117)
+||++ ..+........|.+.|.=.|+ .-|++++.++++.++++
T Consensus 77 VIDfT--------~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 77 LIDFT--------LPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp EEECS--------CHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred EEEcC--------CHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
No 55
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=20.09 E-value=1.5e+02 Score=21.36 Aligned_cols=35 Identities=26% Similarity=0.180 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcce---EEE---EcCCCCHHHHHHHHHhh
Q 046735 78 EIINKVKNASEEWGF---FQV---ISHGIPLSVLNDIKDGI 112 (117)
Q Consensus 78 ~~~~~l~~A~~~~GF---f~v---~nHGI~~~li~~~~~~~ 112 (117)
+..+++.+++++.|+ +++ .+|+|+.+.++++.++.
T Consensus 222 ~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~~l~~~~~fL 262 (285)
T 4fhz_A 222 ADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFL 262 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
Confidence 345566677777775 223 37999999999887754
Done!