BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046743
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2HJC9|PQBP1_BOVIN Polyglutamine-binding protein 1 OS=Bos taurus GN=PQBP1 PE=2 SV=1
Length = 263
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 384 SRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSPG 441
S+K A +D+ELDPMDPSSYSDAPRG W GL + ADTTA GPLFQQRPYPSPG
Sbjct: 188 SKKAASRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPG 247
Query: 442 AVLRKNAEIASQSKK 456
AVLR NAE AS++K+
Sbjct: 248 AVLRANAE-ASRTKQ 261
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRI-----NNKLESTSAQLDDREKLLPGWVEAKDPA 213
LP L+ RL RGILK + I ++ ++ + +L E L P W + DP+
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRL---EGLPPSWYKVFDPS 59
Query: 214 SGASYYYNESTGKSQWERPVETSS 237
G YY+N T W P + +S
Sbjct: 60 CGLPYYWNVDTDLVSWLSPHDPNS 83
>sp|Q91VJ5|PQBP1_MOUSE Polyglutamine-binding protein 1 OS=Mus musculus GN=Pqbp1 PE=2 SV=1
Length = 263
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 251 WIEAVDETSGHKYYYNKRTHVSQWVHP--------GSSKPVASEQSDSNASRNTTNGIWD 302
W + D + G YY+N T + W+ P S+K V + +D+ + D
Sbjct: 52 WYKVFDPSCGLPYYWNVETDLVSWLSPHDPNFVVTKSAKKVRNNNADAEDKSDRNLEKVD 111
Query: 303 NPSSGLERCLHCGGWGVGLVQTWGYCNHCTRVLNLPQCQYLLTSLNKQQQTSNSANAKED 362
+R N R N + ++++ + A+ +E
Sbjct: 112 RNHEKSDRSHEKPDRSHEKADRNHEKNDRERERNYDKVDRERDRDRERERAFDKADREEG 171
Query: 363 SGKNGPKQSWKPPMGRGNRKDSRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQP 420
+ ++ P + + SRK D+ELDPMDPSSYSDAPRG W GL +
Sbjct: 172 KDRRHHRREELAPYPKNKKATSRK-----DEELDPMDPSSYSDAPRGTWSTGLPKRNEAK 226
Query: 421 RAADTTATGPLFQQRPYPSPGAVLRKNAEIASQSKK 456
ADTTA GPLFQQRPYPSPGAVLR NAE AS++K+
Sbjct: 227 TGADTTAAGPLFQQRPYPSPGAVLRANAE-ASRTKQ 261
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRINNKLESTSAQLDDR--EKLLPGWVEAKDPASGA 216
LP L+ RL RGILK + I + + E L P W + DP+ G
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRIEGLPPSWYKVFDPSCGL 62
Query: 217 SYYYNESTGKSQWERP 232
YY+N T W P
Sbjct: 63 PYYWNVETDLVSWLSP 78
>sp|Q6PCT5|PQBP1_RAT Polyglutamine-binding protein 1 OS=Rattus norvegicus GN=Pqbp1 PE=2
SV=1
Length = 263
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 251 WIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLER 310
W + D + G YY+N T + W+ P V S+ + RN+ D LE+
Sbjct: 52 WYKVFDPSCGLPYYWNVETDLVSWLSPHDPNFVVSKSA--KKLRNSNADAEDKSERNLEK 109
Query: 311 CLHC------GGWGVGLVQTWGYCNH----CTRVLNLPQCQYLLTSLNKQQQTSNSANAK 360
NH R N + ++++ + A+ +
Sbjct: 110 VDRNHEKSDRSHEKPDRSHEKADRNHEKSDRERERNYDKVDRERDRDRERERAFDKADRE 169
Query: 361 EDSGKNGPKQSWKPPMGRGNRKDSRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGV 418
+ + ++ P + + SRK D+ELDPMDPSSYSDAPRG W GL +
Sbjct: 170 DGKDRRHHRREELAPYPKNKKATSRK-----DEELDPMDPSSYSDAPRGTWSTGLPKRNE 224
Query: 419 QPRAADTTATGPLFQQRPYPSPGAVLRKNAEIASQSKK 456
ADTTA GPLFQQRPYPSPGAVLR NAE AS+SK+
Sbjct: 225 AKTGADTTAAGPLFQQRPYPSPGAVLRANAE-ASRSKQ 261
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRINNKLESTSAQLDDR--EKLLPGWVEAKDPASGA 216
LP L+ RL RGILK + I + + E L P W + DP+ G
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRIEGLPPSWYKVFDPSCGL 62
Query: 217 SYYYNESTGKSQWERP 232
YY+N T W P
Sbjct: 63 PYYWNVETDLVSWLSP 78
>sp|O60828|PQBP1_HUMAN Polyglutamine-binding protein 1 OS=Homo sapiens GN=PQBP1 PE=1 SV=1
Length = 265
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 384 SRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSPG 441
S+K +D+ELDPMDPSSYSDAPRG W GL + ADTTA GPLFQQRPYPSPG
Sbjct: 190 SKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPG 249
Query: 442 AVLRKNAEIASQSKK 456
AVLR NAE AS++K+
Sbjct: 250 AVLRANAE-ASRTKQ 263
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRI-----NNKLESTSAQLDDREKLLPGWVEAKDPA 213
LP L+ RL RGILK + I ++ ++ + +L E L P W + DP+
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRL---EGLPPSWYKVFDPS 59
Query: 214 SGASYYYNESTGKSQWERPVETSS 237
G YY+N T W P + +S
Sbjct: 60 CGLPYYWNADTDLVSWLSPHDPNS 83
>sp|A1YFA7|PQBP1_GORGO Polyglutamine-binding protein 1 OS=Gorilla gorilla gorilla GN=PQBP1
PE=3 SV=1
Length = 265
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 384 SRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSPG 441
S+K +D+ELDPMDPSSYSDAPRG W GL + ADTTA GPLFQQRPYPSPG
Sbjct: 190 SKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPG 249
Query: 442 AVLRKNAEIASQSKK 456
AVLR NAE AS++K+
Sbjct: 250 AVLRANAE-ASRTKQ 263
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRI-----NNKLESTSAQLDDREKLLPGWVEAKDPA 213
LP L+ RL RGILK + I ++ ++ + +L E L P W + DP+
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRL---EGLPPSWYKVFDPS 59
Query: 214 SGASYYYNESTGKSQWERPVETSS 237
G YY+N T W P + +S
Sbjct: 60 CGLPYYWNADTDLVSWLSPHDPNS 83
>sp|A2T806|PQBP1_PONPY Polyglutamine-binding protein 1 OS=Pongo pygmaeus GN=PQBP1 PE=3
SV=1
Length = 265
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 384 SRKRAFSEDDELDPMDPSSYSDAPRGGWVVGL--KGVQPRAADTTATGPLFQQRPYPSPG 441
S+K +D+ELDPMDPSSYSDAPRG W GL + ADTTA GPLFQQRPYPSPG
Sbjct: 190 SKKAVSRKDEELDPMDPSSYSDAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPG 249
Query: 442 AVLRKNAEIASQSKK 456
AVLR NAE AS++K+
Sbjct: 250 AVLRANAE-ASRTKQ 263
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 159 LPEYLKQRLRARGILKDTSENGDPPRI-----NNKLESTSAQLDDREKLLPGWVEAKDPA 213
LP L+ RL RGILK + I ++ ++ + +L E L P W + DP+
Sbjct: 3 LPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRL---EGLPPSWYKVFDPS 59
Query: 214 SGASYYYNESTGKSQWERPVETSS 237
G YY+N T W P + +S
Sbjct: 60 CGLPYYWNADTDLVSWLSPHDPNS 83
>sp|Q5F457|WBP4_CHICK WW domain-binding protein 4 OS=Gallus gallus GN=WBP4 PE=2 SV=1
Length = 398
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
WV+ P G +YYYN TG+SQWE+P ++T SH + W+E V E GH YYY
Sbjct: 140 WVQGLSP-EGYTYYYNTKTGESQWEKPKGFQGNSKT-SHTGSV--WVEGVSE-DGHTYYY 194
Query: 266 NKRTHVSQWVHP---------GSSKPVASEQSDSNAS 293
N +T VS W P S + SE++DS AS
Sbjct: 195 NTQTGVSTWEKPDGFVSSSNDNSQRGKHSEEADSRAS 231
>sp|P33203|PRP40_YEAST Pre-mRNA-processing protein PRP40 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PRP40 PE=1 SV=1
Length = 583
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 203 LPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHK 262
+ W EAKD ASG YYYN T KS WE+P E S+ + L L E+ +A G
Sbjct: 1 MSIWKEAKD-ASGRIYYYNTLTKKSTWEKPKELISQEE----LLLRENGWKAAKTADGKV 55
Query: 263 YYYNKRTHVSQWVHPGSSKPV--ASEQSDSNASRNTTNG 299
YYYN T + W P K V +EQ S NG
Sbjct: 56 YYYNPTTRETSWTIPAFEKKVEPIAEQKHDTVSHAQVNG 94
>sp|F4JCC1|PR35B_ARATH Pre-mRNA-processing protein 40B OS=Arabidopsis thaliana GN=PRP40B
PE=1 SV=1
Length = 992
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLME------DWIE 253
+K L WVE A G Y++N+ T KS WE+PVE ++L E DW E
Sbjct: 203 QKALTDWVEHTS-ADGRKYFFNKRTKKSTWEKPVEL---------MTLFERADARTDWKE 252
Query: 254 AVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWD 302
G KYYYNK T S W P K V + ++ GI D
Sbjct: 253 H-SSPDGRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIID 300
>sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus norvegicus GN=Arhgap27
PE=1 SV=1
Length = 869
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 201 KLLPGWVEAKDPASGASYYYNESTGKSQWERPVE--------TSSRAQTPSHLSLMEDWI 252
+L P W D +G YYYN TG + WE P E T+SRA S SL +W
Sbjct: 247 RLSPVWETHTDAGTGRPYYYNPDTGVTTWESPFEAPEGATSPTTSRASVGSGESLETEWG 306
Query: 253 EAVDETSGHKYYYNKRTHVSQW 274
+ DE SG ++YN T + W
Sbjct: 307 QYWDEESGRVFFYNPLTGETVW 328
>sp|Q6ZUM4|RHG27_HUMAN Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1
SV=3
Length = 889
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 204 PGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTP--------SHLSLMEDWIEAV 255
P W D +G YYYN TG + WE P E + A +P SH+SL +W +
Sbjct: 250 PVWETHTDAGTGRPYYYNPDTGVTTWESPFEAAEGAASPATSPASVDSHVSLETEWGQYW 309
Query: 256 DETSGHKYYYNKRTHVSQW 274
DE S ++YN T + W
Sbjct: 310 DEESRRVFFYNPLTGETAW 328
>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus musculus GN=Arhgap27 PE=1
SV=1
Length = 869
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 201 KLLPGWVEAKDPASGASYYYNESTGKSQWERPVET--------SSRAQTPSHLSLMEDWI 252
+L P W D +G YYYN TG + WE P ET +SRA S SL +W
Sbjct: 247 RLSPVWETHTDTGTGRPYYYNPDTGVTTWESPFETPEGTTSPATSRASVGSGESLETEWG 306
Query: 253 EAVDETSGHKYYYNKRTHVSQW 274
+ DE S ++YN T + W
Sbjct: 307 QYWDEESRRVFFYNPLTGETAW 328
>sp|Q61048|WBP4_MOUSE WW domain-binding protein 4 OS=Mus musculus GN=Wbp4 PE=1 SV=4
Length = 376
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 205 GWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYY 264
GWVE A G YYY+ TG SQWE+P + + ++ W+E + E G+ YY
Sbjct: 128 GWVEGV-TADGHCYYYDLITGASQWEKPEGFQGNLKKTAAKAV---WVEGLSE-DGYTYY 182
Query: 265 YNKRTHVSQWVHP 277
YN T S+W P
Sbjct: 183 YNTETGESKWEKP 195
>sp|Q5HZF2|WBP4_RAT WW domain-binding protein 4 OS=Rattus norvegicus GN=Wbp4 PE=2 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
WVE A G YYY+ TG SQWE+P + + ++ W+E + E G+ YYY
Sbjct: 127 WVEGVT-ADGHCYYYDLVTGASQWEKPEGFQGNLKKTAAKAI---WVEGLSE-DGYTYYY 181
Query: 266 NKRTHVSQWVHPGSSKP 282
N T S+W P P
Sbjct: 182 NTETGESKWEKPDDFIP 198
>sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana GN=PRP40A
PE=1 SV=1
Length = 958
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 213 ASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVS 272
A G YYYN+ T +S WE+P+E + + ++ +++ G KYYYNK T S
Sbjct: 196 ADGRKYYYNKRTKQSNWEKPLELMTPLERADASTVWKEFTTP----EGKKYYYNKVTKES 251
Query: 273 QWVHPGSSKPVASEQS 288
+W P K +A EQ+
Sbjct: 252 KWTIPEDLK-LAREQA 266
>sp|Q9R1C7|PR40A_MOUSE Pre-mRNA-processing factor 40 homolog A OS=Mus musculus GN=Prpf40a
PE=1 SV=1
Length = 953
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
W E K P G +YYYN T +S WE+P + +TP+ L + + SG YYY
Sbjct: 146 WTEHKSP-DGRTYYYNTETKQSTWEKPDD----LKTPAEQLLSKCPWKEYKSDSGKPYYY 200
Query: 266 NKRTHVSQWVHP 277
N +T S+W P
Sbjct: 201 NSQTKESRWAKP 212
>sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens GN=PRPF40A
PE=1 SV=2
Length = 957
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
W E K P G +YYYN T +S WE+P + +TP+ L + + SG YYY
Sbjct: 146 WTEHKSP-DGRTYYYNTETKQSTWEKPDD----LKTPAEQLLSKCPWKEYKSDSGKPYYY 200
Query: 266 NKRTHVSQWVHP 277
N +T S+W P
Sbjct: 201 NSQTKESRWAKP 212
>sp|Q5BIN5|PIN1_BOVIN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos
taurus GN=PIN1 PE=2 SV=1
Length = 163
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSS 237
+ D EKL PGW + +SG YY+N T SQWERP SS
Sbjct: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSS 42
>sp|Q13526|PIN1_HUMAN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo
sapiens GN=PIN1 PE=1 SV=1
Length = 163
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSS 237
+ D EKL PGW + +SG YY+N T SQWERP SS
Sbjct: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSS 42
>sp|Q9LT25|PR40C_ARATH Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana GN=MED35C
PE=1 SV=1
Length = 835
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 203 LPGWVEAKDPASGASYYYNESTGKSQWERPV----ETSSRAQTPSHLSLME----DWIEA 254
L W K A G YYYN TG+S +E+P E P +S+ DW
Sbjct: 246 LDAWTAHKSEA-GVLYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWA-L 303
Query: 255 VDETSGHKYYYNKRTHVSQWVHPGSSK 281
V G KYYYN +T VS W P K
Sbjct: 304 VSTNDGKKYYYNNKTKVSSWQIPAEVK 330
>sp|O75554|WBP4_HUMAN WW domain-binding protein 4 OS=Homo sapiens GN=WBP4 PE=1 SV=1
Length = 376
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
WVE + G YYY+ +G SQWE+P + + ++ W+E + E G YYY
Sbjct: 128 WVEGI-TSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVKTV---WVEGLSE-DGFTYYY 182
Query: 266 NKRTHVSQWVHPGSSKPVASEQSDSNASRNT 296
N T S+W P P S+ S + N+
Sbjct: 183 NTETGESRWEKPDDFIPHTSDLPSSKVNENS 213
>sp|Q9QUR7|PIN1_MOUSE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus
musculus GN=Pin1 PE=1 SV=1
Length = 165
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERP 232
+ D EKL PGW + +SG YY+N T SQWERP
Sbjct: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>sp|O15428|PINL_HUMAN Putative PIN1-like protein OS=Homo sapiens GN=PIN1P1 PE=5 SV=1
Length = 100
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSS 237
+ D EKL PGW + SG YY+N T SQWERP SS
Sbjct: 1 MADEEKLPPGWEKRMSRPSGRGYYFNHITNPSQWERPSGNSS 42
>sp|Q4R383|PIN1_MACFA Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca
fascicularis GN=PIN1 PE=2 SV=1
Length = 163
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSS 237
+ D EKL PGW + +S YY+N T SQWERP SS
Sbjct: 1 MADEEKLPPGWEKRMSRSSDRVYYFNHITNASQWERPSGNSS 42
>sp|Q80W14|PR40B_MOUSE Pre-mRNA-processing factor 40 homolog B OS=Mus musculus GN=Prpf40b
PE=2 SV=2
Length = 870
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
W E P G YYYN +S WE+P S+A+ L W E +T G YYY
Sbjct: 98 WSEHVAP-DGRIYYYNADDKQSVWEKPSVLKSKAEL---LLSQCPWKEYKSDT-GKPYYY 152
Query: 266 NKRTHVSQWVHP 277
N ++ S+W P
Sbjct: 153 NNQSQESRWTRP 164
>sp|Q6BM04|SET2_DEBHA Histone-lysine N-methyltransferase, H3 lysine-36 specific
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SET2 PE=3 SV=2
Length = 731
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234
E L GW A DP + +YYY+ G S+WERP++
Sbjct: 477 EALPDGWQTAFDPNTQTNYYYHAELGISKWERPIK 511
>sp|Q6NWY9|PR40B_HUMAN Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens GN=PRPF40B
PE=1 SV=1
Length = 871
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
W E P G YYYN +S WE+P S+A+ L W E +T G YYY
Sbjct: 98 WSEHVAP-DGRIYYYNADDKQSVWEKPSVLKSKAEL---LLSQCPWKEYKSDT-GKPYYY 152
Query: 266 NKRTHVSQWVHP 277
N ++ S+W P
Sbjct: 153 NNQSKESRWTRP 164
>sp|Q8GSP8|ZYS3_CHLRE Zygote-specific protein 3 OS=Chlamydomonas reinhardtii GN=ZYS3 PE=2
SV=1
Length = 371
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 26/98 (26%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGH---- 261
W E D ASGA +++N TG + WE P + W E ++ +SG
Sbjct: 287 WRELVDEASGAPFFFNVETGDTTWELPAALA--------------WTEVIESSSGADGES 332
Query: 262 --------KYYYNKRTHVSQWVHPGSSKPVASEQSDSN 291
+Y++N + W P S+ V E S ++
Sbjct: 333 GSGSEAGPRYFHNTVSGEVAWSAPEGSRHVFVEASAAD 370
>sp|Q7ZUK7|WAC_DANRE WW domain-containing adapter protein with coiled-coil OS=Danio
rerio GN=waca PE=2 SV=1
Length = 558
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
+DW E + +SG KYYYN RT VSQW P
Sbjct: 124 DDWSEHIS-SSGKKYYYNCRTEVSQWEKP 151
>sp|Q924H7|WAC_MOUSE WW domain-containing adapter protein with coiled-coil OS=Mus
musculus GN=Wac PE=1 SV=2
Length = 646
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
+DW E + +SG KYYYN RT VSQW P
Sbjct: 133 DDWSEHIS-SSGKKYYYNCRTEVSQWEKP 160
>sp|Q9C0H5|RHG39_HUMAN Rho GTPase-activating protein 39 OS=Homo sapiens GN=ARHGAP39 PE=1
SV=2
Length = 1083
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 190 ESTSAQLDDREKLLPG------WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPS 243
E S +D E +PG WVE +P + Y N TG+ W+ P + + +
Sbjct: 8 ECRSHNVDLPESRIPGSNTRLEWVEIIEPRTRERMYANLVTGECVWDPPAGVRIKRTSEN 67
Query: 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
W E D + YYYN T + W P
Sbjct: 68 Q------WWELFDPNTSRFYYYNASTQRTVWHRP 95
>sp|Q5U4Q0|WAC_XENTR WW domain-containing adapter protein with coiled-coil OS=Xenopus
tropicalis GN=wac PE=2 SV=1
Length = 628
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
+DW E + +SG KYYYN RT VSQW P
Sbjct: 127 DDWSEHIS-SSGKKYYYNCRTEVSQWEKP 154
>sp|Q9BTA9|WAC_HUMAN WW domain-containing adapter protein with coiled-coil OS=Homo
sapiens GN=WAC PE=1 SV=3
Length = 647
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
+DW E + +SG KYYYN RT VSQW P
Sbjct: 133 DDWSEHIS-SSGKKYYYNCRTEVSQWEKP 160
>sp|P59281|RHG39_MOUSE Rho GTPase-activating protein 39 OS=Mus musculus GN=Arhgap39 PE=1
SV=2
Length = 1107
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 190 ESTSAQLDDREKLLPG------WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPS 243
E S +D++E +PG WVE +P + Y N TG+ W+ P + +
Sbjct: 8 ECRSHHVDEQEPRIPGSSTRLEWVEIIEPRTRERMYANLVTGECVWDPPAGVRIKRTS-- 65
Query: 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
+ W E D + YYY+ + + W P
Sbjct: 66 ----EDQWWELFDPNTSRFYYYSAASQRTVWHRP 95
>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2
SV=1
Length = 414
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVD 256
D ++L PGW E + G YY N + K+QWE P +T R + L W + D
Sbjct: 13 DSEDELPPGW-EERTTKDGWVYYANHTEEKTQWEHP-KTGKRKRVAGDLPY--GWEQGTD 68
Query: 257 ETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLE 309
E +G ++ + + ++ P + V D N ++ TT +D ++ LE
Sbjct: 69 E-NGQVFFVDHINKRTTYLDPRLAFTV-----DDNPTKPTTRQRYDGSTTALE 115
>sp|O74883|RPC5_SCHPO DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpc37 PE=3 SV=1
Length = 242
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 136 NDGMGQRNLKLDSESEQKPVTKELPEYLKQRLRARGILKDTSENGDPPRINNKLESTS-- 193
+ M + L+ D EQ PV + P + LR +L N P R N+ S +
Sbjct: 6 DQAMEEAKLRNDETEEQDPVVRTYPVFFSPGLRNNLLL-----NQFPLRPKNRTYSDANG 60
Query: 194 -AQLDDREKLLPGWVEAKDPASGASYYYNESTGK-SQWERPVET---SSRAQTP 242
A +D R K GW+E P YY + K ++P++T S R Q P
Sbjct: 61 EAPIDVRVKPKTGWMEVDVPIPTTKYYNEDKAMKYGNGKKPIQTQTLSGRLQKP 114
>sp|P54353|DOD_DROME Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila
melanogaster GN=dod PE=2 SV=3
Length = 166
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234
D E+L GW + ++G SYY N T +SQW++P E
Sbjct: 3 DAEQLPDGWEKRTSRSTGMSYYLNMYTKESQWDQPTE 39
>sp|Q2EJA0|YAP1_RAT Yorkie homolog OS=Rattus norvegicus GN=Yap1 PE=2 SV=1
Length = 469
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 189 LESTSAQLDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERP---------VETSSRA 239
L +S ++ D L GW AK +SG Y+ N + + W+ P V TS+
Sbjct: 142 LRQSSFEIPDDVPLPAGWEMAKT-SSGQRYFLNHNDQTTTWQDPRKAMLSQLNVPTSASP 200
Query: 240 QTPSHLS------LMEDWIEAVDETSGHKYYYNKRTHVSQWVHP 277
P L L + W +A+ + G YY N + + W+ P
Sbjct: 201 AVPQTLMNSASGPLPDGWEQAMTQ-DGEVYYINHKNKTTSWLDP 243
>sp|Q92870|APBB2_HUMAN Amyloid beta A4 precursor protein-binding family B member 2 OS=Homo
sapiens GN=APBB2 PE=1 SV=3
Length = 758
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 202 LLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQ 240
L PGW D A +YY++ TG +QWERPV + Q
Sbjct: 292 LPPGWKRVSDIA--GTYYWHIPTGTTQWERPVSIPADLQ 328
>sp|O14176|PRP40_SCHPO Pre-mRNA-processing protein prp40 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=prp40 PE=1 SV=1
Length = 695
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYY 265
W E K S YYYN T KS WE+P E + + LS + W E G KY+Y
Sbjct: 36 WHEVKTEDSRV-YYYNSVTRKSVWEKPEELMNDFE--KKLSKLA-WKEYA-TADGKKYWY 90
Query: 266 NKRTHVSQWVHPGSSK 281
N T S W P K
Sbjct: 91 NVNTRESVWDIPDEYK 106
>sp|P46941|TG325_CAEEL WW domain-containing protein tag-325 OS=Caenorhabditis elegans
GN=tag-325 PE=4 SV=1
Length = 837
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHL 245
R LL GW E + G ++++N+ TGKSQW P + AQ L
Sbjct: 95 RRDLLNGWFEYETDV-GRTFFFNKETGKSQWIPPRFIRTPAQVQEFL 140
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 231 RPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDS 290
RPV + RA L+ W E + G +++NK T SQW+ P + A Q
Sbjct: 82 RPVPPTPRADAQPRRDLLNGWFE-YETDVGRTFFFNKETGKSQWIPPRFIRTPAQVQEFL 140
Query: 291 NASR 294
A+R
Sbjct: 141 RATR 144
>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1
SV=1
Length = 414
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVD 256
D ++L PGW E + G YY N + K+QWE P +T R + L W + D
Sbjct: 13 DSEDELPPGW-EERTTKDGWVYYANHTEEKTQWEHP-KTGKRKRVAGDLPY--GWEQETD 68
Query: 257 ETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLE 309
E +G ++ + + ++ P + V D N ++ TT +D ++ +E
Sbjct: 69 E-NGQVFFVDHINKRTTYLDPRLAFTV-----DDNPTKPTTRQRYDGSTTAME 115
>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1
SV=1
Length = 414
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVD 256
D ++L PGW E + G YY N + K+QWE P +T R + L W + D
Sbjct: 13 DSEDELPPGW-EERTTKDGWVYYANHTEEKTQWEHP-KTGKRKRVAGDLPY--GWEQETD 68
Query: 257 ETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLE 309
E +G ++ + + ++ P + V D N ++ TT +D ++ +E
Sbjct: 69 E-NGQVFFVDHINKRTTYLDPRLAFTV-----DDNPTKPTTRQRYDGSTTAME 115
>sp|P0CR40|SEC24_CRYNJ Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SEC24 PE=3 SV=1
Length = 920
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 202 LLP-GWVEAKDPASGASYYYNESTGKSQWERPV 233
+LP GW DP + A Y ++STG+SQWE P+
Sbjct: 6 MLPQGWEARWDPQANAYIYVDQSTGRSQWEVPL 38
>sp|Q06525|URN1_YEAST Pre-mRNA-splicing factor URN1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=URN1 PE=1 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 14/73 (19%)
Query: 206 WVEAKDPASGASYYYNESTGKSQWERP-------VETSSR-AQT---PSH-LSLMEDWIE 253
W E K PA G YYYN++T +S+WE+P +E++++ +QT P+ L L+ W
Sbjct: 5 WQEFKTPA-GKKYYYNKNTKQSRWEKPNLKKGSNLESNAKESQTERKPTFSLELVNGW-H 62
Query: 254 AVDETSGHKYYYN 266
+ G K Y+N
Sbjct: 63 LIIYNDGTKLYFN 75
>sp|P0CR41|SEC24_CRYNB Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SEC24 PE=3
SV=1
Length = 920
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 202 LLP-GWVEAKDPASGASYYYNESTGKSQWERPV 233
+LP GW DP + A Y ++STG+SQWE P+
Sbjct: 6 MLPQGWEARWDPQANAYIYVDQSTGRSQWEVPL 38
>sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1
SV=3
Length = 887
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 202 LLPGWVEAKDPASGASYYYNESTGKSQWERP-VETSSRAQTPSHLSLMED---------- 250
L PGW E +D G SYY + ++ + W +P ++ R++ P+HL D
Sbjct: 407 LPPGWEEKQD-DRGRSYYVDHNSKTTTWSKPTMQDDPRSKIPAHLRGKTDSNDLGPLPPG 465
Query: 251 WIEAVDETSGHKYYYNKRTHVSQWVHP 277
W E T G ++ N +QW P
Sbjct: 466 WEERT-HTDGRVFFINHNIKKTQWEDP 491
>sp|Q9DBR4|APBB2_MOUSE Amyloid beta A4 precursor protein-binding family B member 2 OS=Mus
musculus GN=Apbb2 PE=1 SV=2
Length = 760
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 202 LLPGWVEAKDPASGASYYYNESTGKSQWERPV 233
L PGW D A +YY++ TG +QWERPV
Sbjct: 292 LPPGWKRVNDIA--GTYYWHIPTGTTQWERPV 321
>sp|Q8BZZ3|WWP1_MOUSE NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1
PE=1 SV=2
Length = 918
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 14/78 (17%)
Query: 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETS 259
E L GW + KDP G +YY + +T + WERP L W VD+
Sbjct: 345 EALPSGWEQRKDP-HGRTYYVDHNTRTTTWERPQ------------PLPPGWERRVDD-R 390
Query: 260 GHKYYYNKRTHVSQWVHP 277
G YY + T + W P
Sbjct: 391 GRVYYVDHNTRTTTWQRP 408
>sp|P34600|YO61_CAEEL WW domain-containing protein ZK1098.1 OS=Caenorhabditis elegans
GN=ZK1098.1 PE=1 SV=2
Length = 724
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 215 GASYYYNESTGKSQWERP-VETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQ 273
G YY+N T ++ W +P V + ++ S W E + + G YYYN T +Q
Sbjct: 92 GTPYYHNRVTKQTSWIKPDVLKTPLERSTSGQPQQGQWKEFMSD-DGKPYYYNTLTKKTQ 150
Query: 274 WVHP-------GSSKPVA 284
WV P G KP A
Sbjct: 151 WVKPDGEEITKGEQKPAA 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.127 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,557,568
Number of Sequences: 539616
Number of extensions: 8972643
Number of successful extensions: 18966
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 18706
Number of HSP's gapped (non-prelim): 278
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)