Query 046743
Match_columns 478
No_of_seqs 308 out of 1221
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 06:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tk7_A CG4244-PB; WW domain, n 99.8 6.4E-21 2.2E-25 158.6 7.0 80 198-279 9-88 (88)
2 2kxq_A E3 ubiquitin-protein li 99.8 2E-20 6.9E-25 156.2 9.2 82 197-280 5-88 (90)
3 2l5f_A PRE-mRNA-processing fac 99.8 1.1E-19 3.8E-24 152.4 4.7 80 197-281 7-86 (92)
4 2jxw_A WW domain-binding prote 99.7 8.9E-18 3.1E-22 135.8 9.3 71 204-279 5-75 (75)
5 1o6w_A PRP40, PRE-mRNA process 99.7 1.7E-18 5.6E-23 139.2 3.2 72 204-280 2-73 (75)
6 2kxq_A E3 ubiquitin-protein li 99.6 4.9E-15 1.7E-19 123.6 8.7 79 245-343 8-88 (90)
7 1tk7_A CG4244-PB; WW domain, n 99.5 6.9E-15 2.4E-19 122.3 6.1 76 244-341 10-87 (88)
8 2l5f_A PRE-mRNA-processing fac 99.2 3.6E-12 1.2E-16 106.8 3.9 72 245-341 10-83 (92)
9 2dwv_A Salvador homolog 1 prot 99.2 2.3E-11 7.9E-16 91.9 5.9 45 225-279 1-45 (49)
10 1o6w_A PRP40, PRE-mRNA process 99.2 1.5E-12 5.1E-17 104.5 -0.7 69 249-342 2-72 (75)
11 2jxw_A WW domain-binding prote 99.2 6.4E-11 2.2E-15 95.6 7.7 64 248-336 4-69 (75)
12 3l4h_A E3 ubiquitin-protein li 99.1 7.4E-12 2.5E-16 109.0 -0.5 60 202-280 46-105 (109)
13 1wr3_A Ubiquitin-protein ligas 99.1 9.9E-11 3.4E-15 82.3 4.8 33 200-233 3-35 (36)
14 1wr4_A Ubiquitin-protein ligas 99.0 1.4E-10 4.8E-15 81.1 4.6 33 200-233 3-35 (36)
15 1e0m_A Wwprototype; SH3 protot 99.0 1.7E-10 5.7E-15 81.3 4.6 35 200-235 2-36 (37)
16 2dmv_A Itchy homolog E3 ubiqui 99.0 2.3E-10 7.8E-15 83.8 5.4 36 199-235 5-40 (43)
17 1ymz_A CC45; artificial protei 99.0 1.9E-10 6.6E-15 83.9 5.1 34 246-280 8-41 (43)
18 2kyk_A E3 ubiquitin-protein li 99.0 2E-10 7E-15 82.2 5.0 35 199-234 4-38 (39)
19 2law_A Yorkie homolog; YAP, SM 99.0 1.8E-10 6.1E-15 82.4 4.6 34 245-279 5-38 (38)
20 2ysh_A GAS-7, growth-arrest-sp 99.0 2.2E-10 7.5E-15 82.3 5.0 36 198-234 4-39 (40)
21 2ysg_A Syntaxin-binding protei 99.0 2.3E-10 7.9E-15 82.6 5.1 36 198-234 4-39 (40)
22 2zaj_A Membrane-associated gua 99.0 2.3E-10 7.9E-15 86.6 5.2 39 196-235 8-46 (49)
23 1wr3_A Ubiquitin-protein ligas 99.0 2.2E-10 7.5E-15 80.6 4.7 34 245-279 3-36 (36)
24 2ysf_A E3 ubiquitin-protein li 99.0 2.7E-10 9.1E-15 82.4 5.1 36 198-234 4-39 (40)
25 2kpz_A E3 ubiquitin-protein li 99.0 2.2E-10 7.6E-15 86.2 4.8 39 244-283 10-48 (49)
26 2ysb_A Salvador homolog 1 prot 99.0 3.4E-10 1.2E-14 85.5 5.6 38 197-235 7-44 (49)
27 2ez5_W Dnedd4, E3 ubiquitin-pr 99.0 3.6E-10 1.2E-14 84.1 5.5 38 198-236 7-44 (46)
28 1wr7_A NEDD4-2; all-beta, liga 99.0 2.5E-10 8.7E-15 82.7 4.4 36 198-234 5-40 (41)
29 2law_A Yorkie homolog; YAP, SM 99.0 1.8E-10 6.3E-15 82.3 3.6 34 199-233 4-37 (38)
30 2ez5_W Dnedd4, E3 ubiquitin-pr 99.0 3.8E-10 1.3E-14 84.0 5.0 37 245-282 9-45 (46)
31 2kyk_A E3 ubiquitin-protein li 99.0 4E-10 1.4E-14 80.7 4.8 34 245-279 5-38 (39)
32 1ymz_A CC45; artificial protei 99.0 3.4E-10 1.1E-14 82.6 4.5 39 196-235 3-41 (43)
33 1i5h_W Rnedd4, ubiquitin ligas 99.0 5.6E-10 1.9E-14 84.5 5.8 39 197-236 7-45 (50)
34 2jv4_A Peptidyl-prolyl CIS/tra 99.0 3E-10 1E-14 87.4 4.3 37 199-235 5-41 (54)
35 2djy_A SMAD ubiquitination reg 99.0 4.5E-10 1.5E-14 82.3 4.8 36 199-235 5-40 (42)
36 1e0m_A Wwprototype; SH3 protot 99.0 5E-10 1.7E-14 78.8 4.6 33 246-279 3-35 (37)
37 3l4h_A E3 ubiquitin-protein li 99.0 3.1E-10 1.1E-14 98.9 4.3 61 158-235 45-105 (109)
38 1wr7_A NEDD4-2; all-beta, liga 99.0 4.7E-10 1.6E-14 81.4 4.5 35 244-279 6-40 (41)
39 2ysf_A E3 ubiquitin-protein li 99.0 5.7E-10 2E-14 80.7 4.9 35 244-279 5-39 (40)
40 1wr4_A Ubiquitin-protein ligas 99.0 6.3E-10 2.2E-14 77.8 4.9 34 245-279 3-36 (36)
41 2ysg_A Syntaxin-binding protei 99.0 5.4E-10 1.9E-14 80.7 4.6 34 245-279 6-39 (40)
42 2l4j_A YES-associated protein 98.9 8.4E-10 2.9E-14 82.2 5.5 37 198-235 8-44 (46)
43 2kpz_A E3 ubiquitin-protein li 98.9 5.5E-10 1.9E-14 84.0 4.4 37 199-236 10-46 (49)
44 2ysb_A Salvador homolog 1 prot 98.9 8.5E-10 2.9E-14 83.3 5.3 37 245-282 10-46 (49)
45 2ysd_A Membrane-associated gua 98.9 1.3E-09 4.5E-14 84.7 6.5 39 197-236 10-48 (57)
46 2djy_A SMAD ubiquitination reg 98.9 7.9E-10 2.7E-14 80.9 4.8 36 244-280 5-40 (42)
47 2ysh_A GAS-7, growth-arrest-sp 98.9 1.1E-09 3.9E-14 78.6 5.2 35 244-279 5-39 (40)
48 1i5h_W Rnedd4, ubiquitin ligas 98.9 1.1E-09 3.8E-14 82.9 5.3 37 244-281 9-45 (50)
49 2dmv_A Itchy homolog E3 ubiqui 98.9 9.4E-10 3.2E-14 80.5 4.5 34 245-279 6-39 (43)
50 2jmf_A E3 ubiquitin-protein li 98.9 1.5E-09 5.2E-14 83.2 5.5 38 197-235 14-51 (53)
51 2yse_A Membrane-associated gua 98.9 8.2E-10 2.8E-14 86.9 4.1 39 196-235 8-46 (60)
52 2ho2_A Fe65 protein, amyloid b 98.9 1.1E-09 3.7E-14 79.0 4.2 34 200-235 2-35 (38)
53 2jmf_A E3 ubiquitin-protein li 98.9 1.3E-09 4.5E-14 83.6 5.0 37 244-281 16-52 (53)
54 2ysc_A Amyloid beta A4 precurs 98.9 1.3E-09 4.3E-14 79.0 4.5 34 198-233 5-38 (39)
55 2zaj_A Membrane-associated gua 98.9 1.4E-09 4.7E-14 82.3 4.9 36 244-280 11-46 (49)
56 2l4j_A YES-associated protein 98.9 1.5E-09 5.1E-14 80.9 4.8 35 244-279 9-43 (46)
57 2dwv_A Salvador homolog 1 prot 98.9 1.3E-09 4.3E-14 82.4 4.4 35 200-235 12-46 (49)
58 2jv4_A Peptidyl-prolyl CIS/tra 98.8 2.1E-09 7.1E-14 82.8 4.5 35 245-279 6-40 (54)
59 1wmv_A WWOX, WW domain contain 98.8 3.9E-09 1.3E-13 81.2 6.0 39 244-283 9-47 (54)
60 1wmv_A WWOX, WW domain contain 98.8 5.1E-09 1.8E-13 80.5 5.9 39 199-238 9-47 (54)
61 2ysd_A Membrane-associated gua 98.8 5.2E-09 1.8E-13 81.4 5.5 36 244-280 12-47 (57)
62 2ho2_A Fe65 protein, amyloid b 98.8 4.9E-09 1.7E-13 75.6 4.8 32 246-279 3-34 (38)
63 2ysi_A Transcription elongatio 98.8 6.2E-09 2.1E-13 75.5 5.3 36 198-234 4-39 (40)
64 2jx8_A Hpcif1, phosphorylated 98.8 1.7E-09 6E-14 82.6 1.6 36 200-235 9-44 (52)
65 2jx8_A Hpcif1, phosphorylated 98.7 4E-09 1.4E-13 80.6 2.9 36 245-280 9-44 (52)
66 2yse_A Membrane-associated gua 98.7 4.5E-09 1.5E-13 82.7 3.2 35 244-279 11-45 (60)
67 2e45_A Fe65 protein, amyloid b 98.7 7.6E-09 2.6E-13 80.3 4.3 36 198-235 16-51 (55)
68 2ysc_A Amyloid beta A4 precurs 98.7 1E-08 3.5E-13 74.2 4.6 33 244-278 6-38 (39)
69 1jmq_A YAP65, 65 kDa YES-assoc 98.7 1.1E-08 3.9E-13 75.5 3.4 39 197-236 4-42 (46)
70 1jmq_A YAP65, 65 kDa YES-assoc 98.6 1.2E-08 4.1E-13 75.3 3.3 35 245-280 7-41 (46)
71 1e0l_A Formin binding protein; 98.6 3.5E-08 1.2E-12 70.2 4.7 33 202-235 4-36 (37)
72 1e0l_A Formin binding protein; 98.6 4.5E-08 1.5E-12 69.7 5.2 33 247-280 4-36 (37)
73 2ysi_A Transcription elongatio 98.6 3.5E-08 1.2E-12 71.6 4.6 35 245-280 6-40 (40)
74 1ywi_A Formin-binding protein 98.6 2.6E-08 8.7E-13 72.6 3.2 34 200-234 8-41 (41)
75 1e0n_A Hypothetical protein; Y 98.6 4E-08 1.4E-12 66.0 3.7 27 249-277 1-27 (27)
76 1ywi_A Formin-binding protein 98.5 5.4E-08 1.9E-12 70.8 4.2 34 244-278 7-40 (41)
77 2e45_A Fe65 protein, amyloid b 98.5 7.8E-08 2.7E-12 74.6 4.1 34 244-279 17-50 (55)
78 3tc5_A Peptidyl-prolyl CIS-tra 98.5 6.7E-08 2.3E-12 88.6 4.4 38 199-236 7-44 (166)
79 1e0n_A Hypothetical protein; Y 98.5 5.6E-08 1.9E-12 65.3 2.7 27 204-232 1-27 (27)
80 3tc5_A Peptidyl-prolyl CIS-tra 98.3 3.4E-07 1.2E-11 84.0 4.2 36 245-280 8-43 (166)
81 2dk1_A WW domain-binding prote 98.1 2.2E-06 7.4E-11 65.2 3.5 35 249-284 7-41 (50)
82 2dk1_A WW domain-binding prote 98.1 2.9E-06 9.9E-11 64.5 4.1 35 204-239 7-41 (50)
83 1eg3_A Dystrophin; EF-hand lik 98.0 2.4E-06 8.3E-11 83.8 3.1 35 200-235 10-44 (261)
84 2dk7_A Transcription elongatio 97.9 8.8E-06 3E-10 66.5 5.0 33 249-282 20-52 (73)
85 1eg3_A Dystrophin; EF-hand lik 97.9 4.9E-06 1.7E-10 81.7 3.2 34 245-279 10-43 (261)
86 2dk7_A Transcription elongatio 97.8 1.1E-05 3.9E-10 65.8 3.8 34 204-238 20-53 (73)
87 3olm_A E3 ubiquitin-protein li 97.8 7.4E-06 2.5E-10 85.1 2.7 38 198-236 5-42 (429)
88 3olm_A E3 ubiquitin-protein li 97.7 1.1E-05 3.8E-10 83.8 3.1 37 244-281 6-42 (429)
89 1yw5_A Peptidyl prolyl CIS/tra 97.4 0.00012 4.3E-09 67.0 5.2 36 200-235 6-41 (177)
90 1yw5_A Peptidyl prolyl CIS/tra 96.8 0.00076 2.6E-08 61.7 4.2 35 245-279 6-40 (177)
91 3le4_A Microprocessor complex 93.3 0.091 3.1E-06 43.2 4.6 38 197-235 24-61 (79)
92 3le4_A Microprocessor complex 88.2 0.52 1.8E-05 38.7 4.4 38 243-281 25-62 (79)
93 2ky8_A Methyl-CPG-binding doma 52.1 9.5 0.00032 30.6 2.9 27 199-226 10-43 (72)
94 1d9n_A Methyl-CPG-binding prot 51.4 11 0.00039 30.5 3.3 31 197-228 6-43 (75)
95 3c2i_A Methyl-CPG-binding prot 40.9 19 0.00065 30.7 3.2 31 198-229 20-57 (97)
96 3q7m_A Lipoprotein YFGL, BAMB; 28.1 55 0.0019 30.7 4.5 65 214-279 152-217 (376)
97 2be1_A Serine/threonine-protei 26.7 1E+02 0.0036 30.7 6.4 66 209-275 15-82 (339)
98 3q7m_A Lipoprotein YFGL, BAMB; 24.1 70 0.0024 29.9 4.4 58 214-278 248-305 (376)
99 1ub1_A MECP2, attachment regio 20.1 54 0.0019 29.4 2.5 26 198-223 34-66 (133)
No 1
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.82 E-value=6.4e-21 Score=158.65 Aligned_cols=80 Identities=18% Similarity=0.397 Sum_probs=67.2
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCC
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHP 277 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdP 277 (478)
...+||++|++++|+. |++|||||.|++|+|++|..............||.||++++|+ +|++|||||+|++|+|++|
T Consensus 9 ~~~~LP~gWe~~~~~~-Gr~Yy~n~~t~~t~W~~P~~~~~~~~~~~~~~LP~gWe~~~~~-~G~~Yy~nh~t~~ttw~~P 86 (88)
T 1tk7_A 9 ALGPLPDGWEKKIQSD-NRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTA-AGERFFVDHNTRRTTFEDP 86 (88)
T ss_dssp TTSSSSSSCCEEEETT-TEEEEEETTTTEEEEESCCCTTTCCHHHHSCSSCSSCEEEEET-TTEEEEEETTTTEEESSSS
T ss_pred ccCCCCCCcEEEECCC-CCEEEEECCCCCeEeecccccccccccccccccCCceEEEECC-CCCEEEEECCCCcEeCCCC
Confidence 4557999999999985 9999999999999999998764221000134789999999996 8999999999999999999
Q ss_pred CC
Q 046743 278 GS 279 (478)
Q Consensus 278 r~ 279 (478)
++
T Consensus 87 rl 88 (88)
T 1tk7_A 87 RP 88 (88)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 2
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.82 E-value=2e-20 Score=156.21 Aligned_cols=82 Identities=20% Similarity=0.392 Sum_probs=68.6
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccC--CCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeec
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRA--QTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQW 274 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~--~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqW 274 (478)
.+..+||++|++++|+. |++||||+.|++|+|++|....... .......||.+|++++|. +|++|||||+|++|+|
T Consensus 5 ~~~~~LP~gWe~~~~~~-Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~-~G~~Yy~n~~t~~t~w 82 (90)
T 2kxq_A 5 GSPPDLPEGYEQRTTQQ-GQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTA-TGRVYFVDHNNRTTQF 82 (90)
T ss_dssp SSCCSCCSSCEEEEETT-TEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECT-TSCEEEEETTTTEEES
T ss_pred CCCCCCCCCcEEEECCC-CCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECC-CCCEEEEECCCCcEec
Confidence 34568999999999985 9999999999999999998754321 011235799999999995 8999999999999999
Q ss_pred cCCCCC
Q 046743 275 VHPGSS 280 (478)
Q Consensus 275 EdPr~~ 280 (478)
++|+..
T Consensus 83 ~~Pr~~ 88 (90)
T 2kxq_A 83 TDPRLS 88 (90)
T ss_dssp SCTTTS
T ss_pred CCCCcC
Confidence 999873
No 3
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.77 E-value=1.1e-19 Score=152.42 Aligned_cols=80 Identities=35% Similarity=0.687 Sum_probs=68.0
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccC
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVH 276 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEd 276 (478)
....+||++|++++++. |++||||+.|++|+|++|....... ....++.+|++++++ +||+||||+.|++|+|++
T Consensus 7 ~~~~~lp~~W~e~~~~~-Gr~YYyN~~T~~s~We~P~~~~~~~---e~~~~~~~W~~~~~~-~Gr~Yy~N~~T~~s~We~ 81 (92)
T 2l5f_A 7 GTASGAKSMWTEHKSPD-GRTYYYNTETKQSTWEKPDDLKTPA---EQLLSKCPWKEYKSD-SGKTYYYNSQTKESRWAK 81 (92)
T ss_dssp SSTTBTTTTEEEEECTT-SCEEEEETTTTEEESSCSGGGTCHH---HHHHHSCSEEEEECT-TCCEEEEETTTTEEESCC
T ss_pred CcCCCCCCCcEEEEcCC-CCEEEEECCCCceecccCccccccc---cccccccceEEEECC-CCCEEEEECCCCCeeccC
Confidence 34567999999999995 9999999999999999998764321 112468999999986 999999999999999999
Q ss_pred CCCCC
Q 046743 277 PGSSK 281 (478)
Q Consensus 277 Pr~~~ 281 (478)
|+.+.
T Consensus 82 P~~~~ 86 (92)
T 2l5f_A 82 PKELE 86 (92)
T ss_dssp CHHHH
T ss_pred chhHh
Confidence 98764
No 4
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.73 E-value=8.9e-18 Score=135.79 Aligned_cols=71 Identities=35% Similarity=0.758 Sum_probs=62.6
Q ss_pred CCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 204 PGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 204 pGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.+|+++++++ |++||||+.|++|+|++|..+.... ....++.+|++++++ +|++||||+.|++|+|++|++
T Consensus 5 ~~W~e~~~~~-G~~YYyN~~T~~s~We~P~~~~~~~---e~~~~~~~W~~~~~~-~Gr~YyyN~~T~~s~We~P~e 75 (75)
T 2jxw_A 5 GRWVEGITSE-GYHYYYDLISGASQWEKPEGFQGDL---KKTAVKTVWVEGLSE-DGFTYYYNTETGESRWEKPDD 75 (75)
T ss_dssp CCEEEEEETT-TEEEEEETTTTEEECSCCSSCSSCC---SSSSCCCSEEEEEET-TTEEEEEETTTTEEESSCCCC
T ss_pred CCcEEEECCC-CCEEEEECCCCCEeecCCCcccccc---cccCCCccEEEEECC-CCCEEEEECcCCCEeccCcCC
Confidence 5899999997 9999999999999999998764332 234678999999998 899999999999999999974
No 5
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.72 E-value=1.7e-18 Score=139.24 Aligned_cols=72 Identities=40% Similarity=0.708 Sum_probs=61.8
Q ss_pred CCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 204 PGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 204 pGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
++|++++++. |++||||+.|++|+|++|....... ....|+.+|+++.++ +|++||||+.|++|+|++|+..
T Consensus 2 ~~W~~~~~~~-Gr~YY~n~~T~~s~W~~P~~~~~~~---~~~~lp~gW~~~~~~-~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 2 SIWKEAKDAS-GRIYYYNTLTKKSTWEKPKELISQE---ELLLRENGWKAAKTA-DGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp CCEEEEECTT-CCEEEEETTTTEEESSCCHHHHHHH---HHHHHHHTCEEEECT-TCCEEEEETTTTEEESSCCCCC
T ss_pred CCCeEEECCC-CCeEEEECCCCCEEeecchhhcccc---cccCCCCeEEEEECC-CCCEEEEECCCCCEECCCCCCC
Confidence 4899999995 9999999999999999998653221 123578999999987 8999999999999999999873
No 6
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.57 E-value=4.9e-15 Score=123.64 Aligned_cols=79 Identities=18% Similarity=0.288 Sum_probs=62.1
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCCCcCCCCccCcCCCCCCCCCCCCCCccccCCCCCc--cCcc
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLERCLHCGGWG--VGLV 322 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~S~~aa~~~~~~~~~Gs~~~pgs~~~~~plPpGWe--Vg~d 322 (478)
..||.+|++++|. +||+|||||.|++|+|++|+........ ......+||.||+ +..+
T Consensus 8 ~~LP~gWe~~~~~-~Gr~YY~n~~t~~t~W~~P~~~~~~~~~-------------------~~~~~~~LP~gWe~~~~~~ 67 (90)
T 2kxq_A 8 PDLPEGYEQRTTQ-QGQVYFLHTQTGVSTWHDPRVPRDLSNI-------------------NCEELGPLPPGWEIRNTAT 67 (90)
T ss_dssp CSCCSSCEEEEET-TTEEEEEETTTTEEESSCSSSCSSSCSC-------------------CGGGTCCCCSSCCEEECTT
T ss_pred CCCCCCcEEEECC-CCCEEEEECCCCeEeeeccccccccccc-------------------CcccccccCCCceEEECCC
Confidence 4699999999997 9999999999999999999875322100 0112346999999 6679
Q ss_pred cceeEeeccceeeccccchhh
Q 046743 323 QTWGYCNHCTRVLNLPQCQYL 343 (478)
Q Consensus 323 Gr~~Y~nH~Tr~q~lp~~~~~ 343 (478)
|+.||+||+|++..+-++++.
T Consensus 68 G~~Yy~n~~t~~t~w~~Pr~~ 88 (90)
T 2kxq_A 68 GRVYFVDHNNRTTQFTDPRLS 88 (90)
T ss_dssp SCEEEEETTTTEEESSCTTTS
T ss_pred CCEEEEECCCCcEecCCCCcC
Confidence 999999999999776666543
No 7
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.53 E-value=6.9e-15 Score=122.27 Aligned_cols=76 Identities=17% Similarity=0.323 Sum_probs=60.1
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCCCcCCCCccCcCCCCCCCCCCCCCCccccCCCCCc--cCc
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLERCLHCGGWG--VGL 321 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~S~~aa~~~~~~~~~Gs~~~pgs~~~~~plPpGWe--Vg~ 321 (478)
...||.+|++++|. +||+|||||.|++|+|++|+....... .....+||+||+ +..
T Consensus 10 ~~~LP~gWe~~~~~-~Gr~Yy~n~~t~~t~W~~P~~~~~~~~---------------------~~~~~~LP~gWe~~~~~ 67 (88)
T 1tk7_A 10 LGPLPDGWEKKIQS-DNRVYFVNHKNRTTQWEDPRTQGQEVS---------------------LINEGPLPPGWEIRYTA 67 (88)
T ss_dssp TSSSSSSCCEEEET-TTEEEEEETTTTEEEEESCCCTTTCCH---------------------HHHSCSSCSSCEEEEET
T ss_pred cCCCCCCcEEEECC-CCCEEEEECCCCCeEeecccccccccc---------------------cccccccCCceEEEECC
Confidence 45799999999996 999999999999999999987431100 001236899999 567
Q ss_pred ccceeEeeccceeeccccch
Q 046743 322 VQTWGYCNHCTRVLNLPQCQ 341 (478)
Q Consensus 322 dGr~~Y~nH~Tr~q~lp~~~ 341 (478)
+|+.||+||+|+...+.+++
T Consensus 68 ~G~~Yy~nh~t~~ttw~~Pr 87 (88)
T 1tk7_A 68 AGERFFVDHNTRRTTFEDPR 87 (88)
T ss_dssp TTEEEEEETTTTEEESSSSC
T ss_pred CCCEEEEECCCCcEeCCCCC
Confidence 89999999999997666554
No 8
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.23 E-value=3.6e-12 Score=106.83 Aligned_cols=72 Identities=25% Similarity=0.349 Sum_probs=57.9
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCCCcCCCCccCcCCCCCCCCCCCCCCccccCCCCCc--cCcc
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLERCLHCGGWG--VGLV 322 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~S~~aa~~~~~~~~~Gs~~~pgs~~~~~plPpGWe--Vg~d 322 (478)
..|+.+|++++++ +|++||||+.|++|+|++|..+... ..+.+++.||. +..+
T Consensus 10 ~~lp~~W~e~~~~-~Gr~YYyN~~T~~s~We~P~~~~~~------------------------~e~~~~~~~W~~~~~~~ 64 (92)
T 2l5f_A 10 SGAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPDDLKTP------------------------AEQLLSKCPWKEYKSDS 64 (92)
T ss_dssp TBTTTTEEEEECT-TSCEEEEETTTTEEESSCSGGGTCH------------------------HHHHHHSCSEEEEECTT
T ss_pred CCCCCCcEEEEcC-CCCEEEEECCCCceecccCcccccc------------------------ccccccccceEEEECCC
Confidence 4689999999998 9999999999999999999864211 11235788999 6679
Q ss_pred cceeEeeccceeeccccch
Q 046743 323 QTWGYCNHCTRVLNLPQCQ 341 (478)
Q Consensus 323 Gr~~Y~nH~Tr~q~lp~~~ 341 (478)
|+.||.||.|++..+..++
T Consensus 65 Gr~Yy~N~~T~~s~We~P~ 83 (92)
T 2l5f_A 65 GKTYYYNSQTKESRWAKPK 83 (92)
T ss_dssp CCEEEEETTTTEEESCCCH
T ss_pred CCEEEEECCCCCeeccCch
Confidence 9999999999995554433
No 9
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.19 E-value=2.3e-11 Score=91.90 Aligned_cols=45 Identities=24% Similarity=0.419 Sum_probs=40.7
Q ss_pred CCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 225 GKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 225 geTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
++|+|++|... ..||.||++++|+ +|++|||||.|++|||++|+.
T Consensus 1 ~tt~W~~P~~~---------~~LP~GWe~~~d~-~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 1 GSSGSSGPLER---------EGLPPGWERVESS-EFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp CCSSSCCSCCS---------SCCCTTEEEEEET-TTEEEEEETTTTEEESSCCCC
T ss_pred CeecCcCCCCC---------CCCCcCcEEEECC-CCCEEEEECCCCCEeccCcCC
Confidence 57999999752 4799999999997 999999999999999999986
No 10
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.18 E-value=1.5e-12 Score=104.49 Aligned_cols=69 Identities=32% Similarity=0.416 Sum_probs=54.7
Q ss_pred CCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCCCcCCCCccCcCCCCCCCCCCCCCCccccCCCCCc--cCccccee
Q 046743 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLERCLHCGGWG--VGLVQTWG 326 (478)
Q Consensus 249 ~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~S~~aa~~~~~~~~~Gs~~~pgs~~~~~plPpGWe--Vg~dGr~~ 326 (478)
.+|++++|+ +|++||||+.|++|+|++|...... .....+|.||+ +..+|+.|
T Consensus 2 ~~W~~~~~~-~Gr~YY~n~~T~~s~W~~P~~~~~~------------------------~~~~~lp~gW~~~~~~~Gr~Y 56 (75)
T 1o6w_A 2 SIWKEAKDA-SGRIYYYNTLTKKSTWEKPKELISQ------------------------EELLLRENGWKAAKTADGKVY 56 (75)
T ss_dssp CCEEEEECT-TCCEEEEETTTTEEESSCCHHHHHH------------------------HHHHHHHHTCEEEECTTCCEE
T ss_pred CCCeEEECC-CCCeEEEECCCCCEEeecchhhccc------------------------ccccCCCCeEEEEECCCCCEE
Confidence 589999998 9999999999999999999763110 01235789999 66789999
Q ss_pred Eeeccceeeccccchh
Q 046743 327 YCNHCTRVLNLPQCQY 342 (478)
Q Consensus 327 Y~nH~Tr~q~lp~~~~ 342 (478)
|+||.|++..+..+++
T Consensus 57 y~n~~t~~t~W~~P~~ 72 (75)
T 1o6w_A 57 YYNPTTRETSWTIPAF 72 (75)
T ss_dssp EEETTTTEEESSCCCC
T ss_pred EEECCCCCEECCCCCC
Confidence 9999999966555443
No 11
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.16 E-value=6.4e-11 Score=95.61 Aligned_cols=64 Identities=23% Similarity=0.351 Sum_probs=52.5
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCCCcCCCCccCcCCCCCCCCCCCCCCccccCCCCCc--cCcccce
Q 046743 248 MEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVASEQSDSNASRNTTNGIWDNPSSGLERCLHCGGWG--VGLVQTW 325 (478)
Q Consensus 248 P~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~S~~aa~~~~~~~~~Gs~~~pgs~~~~~plPpGWe--Vg~dGr~ 325 (478)
..+|++++++ +|++||||+.|++|+|++|..+... ..+.+++++|. +..+|+.
T Consensus 4 ~~~W~e~~~~-~G~~YYyN~~T~~s~We~P~~~~~~------------------------~e~~~~~~~W~~~~~~~Gr~ 58 (75)
T 2jxw_A 4 KGRWVEGITS-EGYHYYYDLISGASQWEKPEGFQGD------------------------LKKTAVKTVWVEGLSEDGFT 58 (75)
T ss_dssp CCCEEEEEET-TTEEEEEETTTTEEECSCCSSCSSC------------------------CSSSSCCCSEEEEEETTTEE
T ss_pred CCCcEEEECC-CCCEEEEECCCCCEeecCCCccccc------------------------ccccCCCccEEEEECCCCCE
Confidence 4789999999 7999999999999999999875311 11235789999 6678999
Q ss_pred eEeeccceeec
Q 046743 326 GYCNHCTRVLN 336 (478)
Q Consensus 326 ~Y~nH~Tr~q~ 336 (478)
||.||.|++..
T Consensus 59 YyyN~~T~~s~ 69 (75)
T 2jxw_A 59 YYYNTETGESR 69 (75)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECcCCCEe
Confidence 99999999843
No 12
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.09 E-value=7.4e-12 Score=108.99 Aligned_cols=60 Identities=12% Similarity=0.294 Sum_probs=54.1
Q ss_pred CCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 202 LLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 202 LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
.|.+|+++.++. |++||+|+.+.+ ..+||.|||+++|+ +|++||+||+|++|+|++|+..
T Consensus 46 ~p~~we~~~~~~-~lV~~vn~~~d~-----------------~~pLP~GWE~r~d~-~Gr~YfIdH~tktTtW~dPRl~ 105 (109)
T 3l4h_A 46 DARNFERYQHNR-DLVNFINMFADT-----------------RLELPRGWEIKTDQ-QGKSFFVDHNSRATTFIDPRIP 105 (109)
T ss_dssp CTHHHHHHTTCH-HHHHHHHTTCCT-----------------TSCCCTTEEEEECT-TCCEEEEETTTTEEESSCSCCS
T ss_pred CCcChhhhcCcC-CceEEeccCCCC-----------------CCCCCCCCeEEECC-CCCEEEEeCCCCCEeeCCCCcc
Confidence 589999999997 999999999742 23699999999998 9999999999999999999974
No 13
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.08 E-value=9.9e-11 Score=82.32 Aligned_cols=33 Identities=42% Similarity=0.879 Sum_probs=31.0
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCC
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPV 233 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~ 233 (478)
.+||++|++++|+ +|++||||+.|++|+|++|.
T Consensus 3 ~~LP~GWe~~~d~-~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 3 PPLPPGWEEKVDN-LGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp SCSCTTEEEEECS-SSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeeeCcC
Confidence 5799999999997 59999999999999999996
No 14
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.05 E-value=1.4e-10 Score=81.08 Aligned_cols=33 Identities=39% Similarity=0.892 Sum_probs=31.0
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCC
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPV 233 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~ 233 (478)
.+||++|+++.|+ +|++||||+.|++|+|++|.
T Consensus 3 ~~LP~gWe~~~d~-~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 3 PGLPSGWEERKDA-KGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp TTCCTTEEEEECS-SSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeCcCCC
Confidence 5799999999998 59999999999999999996
No 15
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.04 E-value=1.7e-10 Score=81.29 Aligned_cols=35 Identities=43% Similarity=0.820 Sum_probs=32.0
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+||++|++++|+. |++||||+.|++|+|++|...
T Consensus 2 ~~LP~gW~~~~~~~-G~~Yy~n~~t~~t~W~~P~~~ 36 (37)
T 1e0m_A 2 MGLPPGWDEYKTHN-GKTYYYNHNTKTSTWTDPRMS 36 (37)
T ss_dssp CCSCTTEEEEECSS-CCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcEEEECCC-CCEEEEECCCCCeeeeCcCCC
Confidence 47999999999985 999999999999999999753
No 16
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=2.3e-10 Score=83.78 Aligned_cols=36 Identities=31% Similarity=0.763 Sum_probs=33.0
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
..+||++|++++|+ +|++||||+.|++|+|++|...
T Consensus 5 ~~~LP~GWe~~~d~-~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQ-HGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CCSCCTTEEEEECT-TSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCceEEECC-CCCEEEEECCCCCEecCCcCCC
Confidence 46899999999998 5999999999999999999864
No 17
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=99.04 E-value=1.9e-10 Score=83.85 Aligned_cols=34 Identities=32% Similarity=0.655 Sum_probs=31.7
Q ss_pred CCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 246 SLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 246 ~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
.||.+|++++|+ +|++||||+.|++|+|++|+..
T Consensus 8 ~LP~gW~~~~~~-~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 8 PLPPGWERRTDV-EGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp CCCSSEEEEECT-TSCEEEEETTTTEEESSCCCSC
T ss_pred CCCCCCEEEECC-CCCEEEEECCCCCCcccCCccc
Confidence 589999999997 9999999999999999999864
No 18
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.03 E-value=2e-10 Score=82.23 Aligned_cols=35 Identities=34% Similarity=0.692 Sum_probs=32.0
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
..+||++|++++|+ +|++||||+.|++|+|++|..
T Consensus 4 ~~~LP~gWe~~~d~-~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 4 MGPLPPGWERRVDN-MGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp SCCCCSSCEEEECT-TSCEEEECSSSCCEECCCCCC
T ss_pred cCCCCCCcEEEEcC-CCCEEEEECCCCCEeccCCCC
Confidence 35799999999998 599999999999999999974
No 19
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.03 E-value=1.8e-10 Score=82.40 Aligned_cols=34 Identities=26% Similarity=0.690 Sum_probs=31.7
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.+||.+|++++|. +|++|||||.|++|+|++|++
T Consensus 5 ~~LP~gWe~~~~~-~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 5 GPLPDGWEQAMTQ-DGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp CCCSSSCCEEEET-TTEEEEEETTTTEEESSCTTC
T ss_pred CCCCCCcEEEECC-CCCEEEEECCCCCEeCCCCCC
Confidence 4799999999995 999999999999999999984
No 20
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.03 E-value=2.2e-10 Score=82.27 Aligned_cols=36 Identities=39% Similarity=0.850 Sum_probs=32.5
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
...+||++|++++|+. |++||||+.|++|+|++|..
T Consensus 4 ~~~~LP~gW~~~~d~~-Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 4 GSSGLPPGWQSYLSPQ-GRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CCSSCCTTCEEEECTT-SCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCCceEEECCC-CCEEEEECCCCCEeCCCCCC
Confidence 3468999999999985 99999999999999999964
No 21
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.03 E-value=2.3e-10 Score=82.64 Aligned_cols=36 Identities=33% Similarity=0.613 Sum_probs=32.5
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
...+||++|++++|+. |++|||||+|++|+|++|..
T Consensus 4 ~~~~LP~gWe~~~~~~-Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 4 GSSGLPYGWEEAYTAD-GIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SSSCCCTTEEEEECSS-SCEEEEESSSCCEECCCCCC
T ss_pred CcCCCCCCcEEEEcCC-CCEEEEECCCCcCcCCCCCC
Confidence 3468999999999975 99999999999999999974
No 22
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.03 E-value=2.3e-10 Score=86.56 Aligned_cols=39 Identities=33% Similarity=0.630 Sum_probs=34.9
Q ss_pred cCCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 196 ~~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+...+||++|++++|+. |++|||||.|++|+|++|...
T Consensus 8 ~~~~~~LP~GWe~~~d~~-Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 8 LDSELELPAGWEKIEDPV-YGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp CCCSSCCCTTEEEEEETT-TEEEEEETTTTEEESSCCCSS
T ss_pred cCCCCCCCcCceEEEcCC-CCEEEEeCCCCCEecCCCCCC
Confidence 445678999999999975 999999999999999999864
No 23
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.02 E-value=2.2e-10 Score=80.56 Aligned_cols=34 Identities=35% Similarity=0.690 Sum_probs=31.5
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.+||.||++++|+ +|++||||+.|++|+|++|++
T Consensus 3 ~~LP~GWe~~~d~-~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDN-LGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECS-SSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeeeCcCC
Confidence 4699999999996 999999999999999999974
No 24
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.02 E-value=2.7e-10 Score=82.41 Aligned_cols=36 Identities=17% Similarity=0.368 Sum_probs=32.6
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
...+||++|++++|+. |++|||||+|++|+|++|..
T Consensus 4 ~~~~LP~gWe~~~~~~-G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 4 GSSGLPEGWEMRFTVD-GIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCCSSEEEEECTT-CCEEEEETTTCCEESSCTTT
T ss_pred CcCCCCcCcEEEEcCC-CCEEEEECCCCcEecCCCCC
Confidence 3468999999999975 99999999999999999974
No 25
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.02 E-value=2.2e-10 Score=86.16 Aligned_cols=39 Identities=18% Similarity=0.434 Sum_probs=32.5
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPV 283 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv 283 (478)
...||.+|++++|+ +|++|||||+|++|+|++|+...++
T Consensus 10 ~~~LP~gWe~~~~~-~G~~Yy~nh~T~~ttWe~Pr~~~p~ 48 (49)
T 2kpz_A 10 QGFLPKGWEVRHAP-NGRPFFIDHNTKTTTWEDPRLKIPA 48 (49)
T ss_dssp --CCCTTEEEEECT-TSCEEEEETTTTEEESSCTTCC---
T ss_pred CCCCCCCcEEEECC-CCCEEEEECCCCCEecCCCCCCCCC
Confidence 35799999999996 9999999999999999999986654
No 26
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.01 E-value=3.4e-10 Score=85.52 Aligned_cols=38 Identities=29% Similarity=0.695 Sum_probs=34.3
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
+...+||++|++++|+. |++|||||+|++|+|++|...
T Consensus 7 ~~~~~LP~gWe~~~~~~-Gr~Yy~nh~t~~T~W~~P~~~ 44 (49)
T 2ysb_A 7 GEDLPLPPGWSVDWTMR-GRKYYIDHNTNTTHWSHPLES 44 (49)
T ss_dssp CCCCCCCTTEEEEECSS-SCEEEEETTTTEEESSCTTTS
T ss_pred CCCCCCCCCceEEECCC-CCEEEEEcCCCCEEecCCCCC
Confidence 45568999999999985 999999999999999999875
No 27
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.01 E-value=3.6e-10 Score=84.13 Aligned_cols=38 Identities=21% Similarity=0.636 Sum_probs=34.0
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
...+||++|++++|+. |++|||||+|++|+|++|....
T Consensus 7 ~~~~LP~gWe~~~~~~-Gr~Yyinh~t~~TtW~~Pr~~~ 44 (46)
T 2ez5_W 7 EEEPLPPRWSMQVAPN-GRTFFIDHASRRTTWIDPRNGR 44 (46)
T ss_dssp CSCCCCTTEEEEECTT-SSEEEEETTTTEEESBCTTTCC
T ss_pred CCCCCCcCcEEEEcCC-CCEEEEECCCCCEeccCCCCCC
Confidence 4568999999999985 9999999999999999998753
No 28
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.00 E-value=2.5e-10 Score=82.74 Aligned_cols=36 Identities=28% Similarity=0.628 Sum_probs=32.5
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
...+||++|++++|+. |++|||||.|++|+|++|..
T Consensus 5 ~~~~LP~gWe~~~~~~-G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 5 IQSFLPPGWEMRIAPN-GRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCCSSCTTEEEEECTT-SCEEEEETTTTEEESSCGGG
T ss_pred ccCCCCCCcEEEEcCC-CCEEEEECCCCCeecCCCCC
Confidence 3468999999999985 99999999999999999974
No 29
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.00 E-value=1.8e-10 Score=82.32 Aligned_cols=34 Identities=29% Similarity=0.618 Sum_probs=31.0
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCC
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPV 233 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~ 233 (478)
..+||++|++++|+. |++|||||.|++|+|++|+
T Consensus 4 ~~~LP~gWe~~~~~~-G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 4 EGPLPDGWEQAMTQD-GEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp -CCCSSSCCEEEETT-TEEEEEETTTTEEESSCTT
T ss_pred cCCCCCCcEEEECCC-CCEEEEECCCCCEeCCCCC
Confidence 357999999999975 9999999999999999996
No 30
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.99 E-value=3.8e-10 Score=84.02 Aligned_cols=37 Identities=16% Similarity=0.553 Sum_probs=33.8
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKP 282 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~p 282 (478)
..||.+|++++|. +|++|||||+|++|+|++|+...+
T Consensus 9 ~~LP~gWe~~~~~-~Gr~Yyinh~t~~TtW~~Pr~~~~ 45 (46)
T 2ez5_W 9 EPLPPRWSMQVAP-NGRTFFIDHASRRTTWIDPRNGRA 45 (46)
T ss_dssp CCCCTTEEEEECT-TSSEEEEETTTTEEESBCTTTCCB
T ss_pred CCCCcCcEEEEcC-CCCEEEEECCCCCEeccCCCCCCC
Confidence 4799999999996 999999999999999999998654
No 31
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.98 E-value=4e-10 Score=80.73 Aligned_cols=34 Identities=29% Similarity=0.565 Sum_probs=31.8
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.+||.||++++|+ +|++|||||.|++|+|++|+.
T Consensus 5 ~~LP~gWe~~~d~-~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 5 GPLPPGWERRVDN-MGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp CCCCSSCEEEECT-TSCEEEECSSSCCEECCCCCC
T ss_pred CCCCCCcEEEEcC-CCCEEEEECCCCCEeccCCCC
Confidence 4799999999996 999999999999999999975
No 32
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.98 E-value=3.4e-10 Score=82.60 Aligned_cols=39 Identities=36% Similarity=0.687 Sum_probs=32.6
Q ss_pred cCCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 196 ~~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
+....+||++|++++|+ +|++||||+.|++|+|++|...
T Consensus 3 we~~~~LP~gW~~~~~~-~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 3 HGRSMPLPPGWERRTDV-EGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp ----CCCCSSEEEEECT-TSCEEEEETTTTEEESSCCCSC
T ss_pred cccCCCCCCCCEEEECC-CCCEEEEECCCCCCcccCCccc
Confidence 34456899999999998 5999999999999999999864
No 33
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.98 E-value=5.6e-10 Score=84.50 Aligned_cols=39 Identities=33% Similarity=0.709 Sum_probs=34.5
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
....+||++|++++|+ +|++|||||.|++|+|++|....
T Consensus 7 ~~~~~LP~gWe~~~~~-~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 7 NDLGPLPPGWEERTHT-DGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp SCCSSCSTTEEEEECT-TSCEEEEETTTTEEESSCTTTSC
T ss_pred ccCCCCCcCcEEEEcC-CCCEEEEECCCCCEEeeCCCCCc
Confidence 3456899999999996 59999999999999999998754
No 34
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.98 E-value=3e-10 Score=87.42 Aligned_cols=37 Identities=32% Similarity=0.719 Sum_probs=34.0
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
...||+||++++|..+|++||||+.|++|+|++|...
T Consensus 5 ~~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 5 NTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 3579999999999877999999999999999999865
No 35
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.97 E-value=4.5e-10 Score=82.25 Aligned_cols=36 Identities=22% Similarity=0.533 Sum_probs=32.7
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
..+||++|++++|+ +|++|||||+|++|+|++|...
T Consensus 5 ~~~LP~GWe~~~~~-~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 5 SGPLPPGWEIRNTA-TGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CSCCCSSEEEEECS-SSCEEEEETTTTEEESSCTTTS
T ss_pred cCCCCcCcEEEECC-CCCEEEEECCCCCEeCCCCCCC
Confidence 45799999999997 5999999999999999999864
No 36
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.96 E-value=5e-10 Score=78.84 Aligned_cols=33 Identities=36% Similarity=0.742 Sum_probs=31.2
Q ss_pred CCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 246 SLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 246 ~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
+||.+|++++|+ +|++||||+.|++|+|++|+.
T Consensus 3 ~LP~gW~~~~~~-~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 3 GLPPGWDEYKTH-NGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CSCTTEEEEECS-SCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCcEEEECC-CCCEEEEECCCCCeeeeCcCC
Confidence 689999999996 999999999999999999986
No 37
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=98.96 E-value=3.1e-10 Score=98.86 Aligned_cols=61 Identities=16% Similarity=0.295 Sum_probs=54.5
Q ss_pred CCCHHHHHhHhhccccccCCCCCCCCcccccccCCCcccCCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 158 ELPEYLKQRLRARGILKDTSENGDPPRINNKLESTSAQLDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 158 ~LPp~L~qRL~~RGIl~~~~~~s~p~~ia~n~~~~s~~~~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
-+|.+|+++...+|+++.+.+..+ ...+||+|||+++|+. |++||+||+|++|+|++|...
T Consensus 45 r~p~~we~~~~~~~lV~~vn~~~d----------------~~~pLP~GWE~r~d~~-Gr~YfIdH~tktTtW~dPRl~ 105 (109)
T 3l4h_A 45 RDARNFERYQHNRDLVNFINMFAD----------------TRLELPRGWEIKTDQQ-GKSFFVDHNSRATTFIDPRIP 105 (109)
T ss_dssp HCTHHHHHHTTCHHHHHHHHTTCC----------------TTSCCCTTEEEEECTT-CCEEEEETTTTEEESSCSCCS
T ss_pred cCCcChhhhcCcCCceEEeccCCC----------------CCCCCCCCCeEEECCC-CCEEEEeCCCCCEeeCCCCcc
Confidence 379999999999999999998754 2457999999999995 999999999999999999865
No 38
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.96 E-value=4.7e-10 Score=81.35 Aligned_cols=35 Identities=17% Similarity=0.483 Sum_probs=32.2
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
...||.+|++++|+ +|++|||||.|++|+|++|+.
T Consensus 6 ~~~LP~gWe~~~~~-~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 6 QSFLPPGWEMRIAP-NGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCSSCTTEEEEECT-TSCEEEEETTTTEEESSCGGG
T ss_pred cCCCCCCcEEEEcC-CCCEEEEECCCCCeecCCCCC
Confidence 35799999999996 899999999999999999974
No 39
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.96 E-value=5.7e-10 Score=80.66 Aligned_cols=35 Identities=17% Similarity=0.451 Sum_probs=32.2
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..+||.+|++++|+ +|++|||||+|++|+|++|+.
T Consensus 5 ~~~LP~gWe~~~~~-~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 5 SSGLPEGWEMRFTV-DGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCSSEEEEECT-TCCEEEEETTTCCEESSCTTT
T ss_pred cCCCCcCcEEEEcC-CCCEEEEECCCCcEecCCCCC
Confidence 35799999999995 999999999999999999985
No 40
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.96 E-value=6.3e-10 Score=77.76 Aligned_cols=34 Identities=29% Similarity=0.620 Sum_probs=31.3
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.+||.+|++++|+ +|++||||+.|++|+|++|+.
T Consensus 3 ~~LP~gWe~~~d~-~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDA-KGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECS-SSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeCcCCCC
Confidence 3689999999997 999999999999999999963
No 41
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.95 E-value=5.4e-10 Score=80.70 Aligned_cols=34 Identities=35% Similarity=0.667 Sum_probs=31.8
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..||.+|++++|+ +|++|||||.|++|+|++|+.
T Consensus 6 ~~LP~gWe~~~~~-~Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 6 SGLPYGWEEAYTA-DGIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SCCCTTEEEEECS-SSCEEEEESSSCCEECCCCCC
T ss_pred CCCCCCcEEEEcC-CCCEEEEECCCCcCcCCCCCC
Confidence 4799999999995 999999999999999999985
No 42
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.95 E-value=8.4e-10 Score=82.24 Aligned_cols=37 Identities=30% Similarity=0.602 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
...+||++|++++|+. |++|||||+|++|+|++|...
T Consensus 8 ~~~~LP~gWe~~~~~~-G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 8 ASGPLPEGWEQAITPE-GEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TTSCCCTTCEEEECTT-SCEEEEETTTTEEECSCCSSC
T ss_pred cCCCCCcCceeEECCC-CCEEEEECCCCCEeCCCCCcC
Confidence 4568999999999975 999999999999999999853
No 43
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.94 E-value=5.5e-10 Score=84.03 Aligned_cols=37 Identities=24% Similarity=0.573 Sum_probs=32.0
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
..+||++|++++|+. |++|||||+|++|+|++|....
T Consensus 10 ~~~LP~gWe~~~~~~-G~~Yy~nh~T~~ttWe~Pr~~~ 46 (49)
T 2kpz_A 10 QGFLPKGWEVRHAPN-GRPFFIDHNTKTTTWEDPRLKI 46 (49)
T ss_dssp --CCCTTEEEEECTT-SCEEEEETTTTEEESSCTTCC-
T ss_pred CCCCCCCcEEEECCC-CCEEEEECCCCCEecCCCCCCC
Confidence 457999999999975 9999999999999999998753
No 44
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.93 E-value=8.5e-10 Score=83.32 Aligned_cols=37 Identities=35% Similarity=0.695 Sum_probs=33.7
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKP 282 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~p 282 (478)
.+||.+|++++|+ +|++|||||+|++|+|++|+...+
T Consensus 10 ~~LP~gWe~~~~~-~Gr~Yy~nh~t~~T~W~~P~~~~p 46 (49)
T 2ysb_A 10 LPLPPGWSVDWTM-RGRKYYIDHNTNTTHWSHPLESGP 46 (49)
T ss_dssp CCCCTTEEEEECS-SSCEEEEETTTTEEESSCTTTSCC
T ss_pred CCCCCCceEEECC-CCCEEEEEcCCCCEEecCCCCCCC
Confidence 3699999999997 999999999999999999998544
No 45
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.93 E-value=1.3e-09 Score=84.75 Aligned_cols=39 Identities=23% Similarity=0.450 Sum_probs=34.8
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
+...+||++|++++|+. |++|||||+|++|+|++|....
T Consensus 10 ~~~~~LP~GWe~~~~~~-Gr~Yyinh~tk~TtWe~Pr~~~ 48 (57)
T 2ysd_A 10 DNLGPLPENWEMAYTEN-GEVYFIDHNTKTTSWLDPRCLN 48 (57)
T ss_dssp SCCCSCCSSEEEEECSS-CCEEEEETTTTEEESSCTTTCS
T ss_pred CCCCCCCcCcEEEECCC-CCEEEEECCCCcEecCCCCCcc
Confidence 44568999999999985 9999999999999999998764
No 46
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.93 E-value=7.9e-10 Score=80.94 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=32.7
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
..+||.+|++++|. +|++|||||.|++|+|++|+..
T Consensus 5 ~~~LP~GWe~~~~~-~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 5 SGPLPPGWEIRNTA-TGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CSCCCSSEEEEECS-SSCEEEEETTTTEEESSCTTTS
T ss_pred cCCCCcCcEEEECC-CCCEEEEECCCCCEeCCCCCCC
Confidence 35799999999995 9999999999999999999873
No 47
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.92 E-value=1.1e-09 Score=78.56 Aligned_cols=35 Identities=29% Similarity=0.630 Sum_probs=32.1
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
...||.+|++++|+ +|++||||+.|++|+|++|+.
T Consensus 5 ~~~LP~gW~~~~d~-~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSP-QGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECT-TSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECC-CCCEEEEECCCCCEeCCCCCC
Confidence 35799999999997 999999999999999999974
No 48
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.92 E-value=1.1e-09 Score=82.92 Aligned_cols=37 Identities=22% Similarity=0.467 Sum_probs=33.4
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSK 281 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~ 281 (478)
..+||.+|++++|. +|++|||||.|++|+|++|+...
T Consensus 9 ~~~LP~gWe~~~~~-~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 9 LGPLPPGWEERTHT-DGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp CSSCSTTEEEEECT-TSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCCcCcEEEEcC-CCCEEEEECCCCCEEeeCCCCCc
Confidence 35799999999995 99999999999999999999753
No 49
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=9.4e-10 Score=80.51 Aligned_cols=34 Identities=26% Similarity=0.616 Sum_probs=32.1
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..||.+|++++|+ +|++||||+.|++|+|++|+.
T Consensus 6 ~~LP~GWe~~~d~-~Gr~YY~n~~t~~T~We~P~~ 39 (43)
T 2dmv_A 6 SGLPPGWEQRVDQ-HGRVYYVDHVEKRTTWDRPSG 39 (43)
T ss_dssp CSCCTTEEEEECT-TSCEEEEETTTCCEESSCSSS
T ss_pred CCCCCCceEEECC-CCCEEEEECCCCCEecCCcCC
Confidence 4799999999997 999999999999999999986
No 50
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.90 E-value=1.5e-09 Score=83.23 Aligned_cols=38 Identities=21% Similarity=0.503 Sum_probs=33.9
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
....+||+||++++|. +|++|||||+|++|+|++|...
T Consensus 14 ~~~~~LP~GWe~~~~~-~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 14 INEGPLPPGWEIRYTA-AGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp TSCSCCCTTEEEEECT-TSCEEEEETTTCCEESSCCCSS
T ss_pred CcCCCCCcCcEEEEcC-CCCEEEEeCCCCcEecCCCCCC
Confidence 3456899999999997 5999999999999999999864
No 51
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=8.2e-10 Score=86.91 Aligned_cols=39 Identities=36% Similarity=0.649 Sum_probs=35.0
Q ss_pred cCCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 196 LDDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 196 ~~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+...+||++|++++|+. |++|||||.|++|+|++|...
T Consensus 8 ~d~~~~LP~GWE~~~d~~-Gr~YYvnh~tk~T~We~P~~~ 46 (60)
T 2yse_A 8 LDSELELPAGWEKIEDPV-YGIYYVDHINRKTQYENPVLE 46 (60)
T ss_dssp CCCCSSCCSSEEEEECSS-SCEEEEETTTTEEESSCHHHH
T ss_pred cCCCCCCCCCcEEEECCC-CCEEEEeCCCCCeeccCCCch
Confidence 455678999999999975 999999999999999999865
No 52
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.89 E-value=1.1e-09 Score=78.96 Aligned_cols=34 Identities=38% Similarity=0.934 Sum_probs=30.5
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+||+||++++|.. | +||||+.|++|+|++|...
T Consensus 2 ~~LP~GWe~~~d~~-g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQDTS-G-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEECSS-C-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEeCC-C-CEEEecCCCCEeccCCCCC
Confidence 36999999999984 9 9999999999999999753
No 53
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.89 E-value=1.3e-09 Score=83.57 Aligned_cols=37 Identities=14% Similarity=0.356 Sum_probs=33.6
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSK 281 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~ 281 (478)
...||.||++++|. +|++|||||+|++|+|++|+..+
T Consensus 16 ~~~LP~GWe~~~~~-~Gr~Yyinh~tk~TtW~dPr~~~ 52 (53)
T 2jmf_A 16 EGPLPPGWEIRYTA-AGERFFVDHNTRRTTFEDPRPGA 52 (53)
T ss_dssp CSCCCTTEEEEECT-TSCEEEEETTTCCEESSCCCSSC
T ss_pred CCCCCcCcEEEEcC-CCCEEEEeCCCCcEecCCCCCCC
Confidence 35799999999995 99999999999999999999754
No 54
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.89 E-value=1.3e-09 Score=79.00 Aligned_cols=34 Identities=41% Similarity=1.009 Sum_probs=30.9
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCC
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPV 233 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~ 233 (478)
...+||+||++++|+. | .||||+.|++|+|++|.
T Consensus 5 ~~~~LP~GWe~~~~~~-G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 5 SSGGLPPGWRKIHDAA-G-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCCTTEEEEEETT-E-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCCcEEEEcCC-C-CEEEEcCCCCEeccCCC
Confidence 4568999999999997 9 59999999999999995
No 55
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=98.89 E-value=1.4e-09 Score=82.29 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=32.8
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
...||.+|++++|+ +|++|||||.|++|||++|+..
T Consensus 11 ~~~LP~GWe~~~d~-~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 11 ELELPAGWEKIEDP-VYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEET-TTEEEEEETTTTEEESSCCCSS
T ss_pred CCCCCcCceEEEcC-CCCEEEEeCCCCCEecCCCCCC
Confidence 35799999999996 9999999999999999999863
No 56
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.88 E-value=1.5e-09 Score=80.89 Aligned_cols=35 Identities=29% Similarity=0.668 Sum_probs=32.4
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..+||.||++++|. +|++|||||+|++|+|++|+.
T Consensus 9 ~~~LP~gWe~~~~~-~G~~Yyinh~t~~TtWe~Pr~ 43 (46)
T 2l4j_A 9 SGPLPEGWEQAITP-EGEIYYINHKNKTTSWLDPRL 43 (46)
T ss_dssp TSCCCTTCEEEECT-TSCEEEEETTTTEEECSCCSS
T ss_pred CCCCCcCceeEECC-CCCEEEEECCCCCEeCCCCCc
Confidence 35799999999995 999999999999999999986
No 57
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.88 E-value=1.3e-09 Score=82.40 Aligned_cols=35 Identities=26% Similarity=0.625 Sum_probs=32.6
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+||+||++++|+. |++||+||+|++|+|++|...
T Consensus 12 ~~LP~GWe~~~d~~-g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 12 EGLPPGWERVESSE-FGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp SCCCTTEEEEEETT-TEEEEEETTTTEEESSCCCCC
T ss_pred CCCCcCcEEEECCC-CCEEEEECCCCCEeccCcCCC
Confidence 57999999999985 999999999999999999864
No 58
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.84 E-value=2.1e-09 Score=82.78 Aligned_cols=35 Identities=26% Similarity=0.541 Sum_probs=32.8
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..||+||++++|..+|++||||+.|++||||+|..
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~ 40 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPAD 40 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTT
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCC
Confidence 46999999999988999999999999999999976
No 59
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.84 E-value=3.9e-09 Score=81.19 Aligned_cols=39 Identities=18% Similarity=0.386 Sum_probs=34.6
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPV 283 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv 283 (478)
...||.||++++|+ +|++|||||+|++|+|++|+....+
T Consensus 9 ~~~LP~GWe~~~~~-~G~~Yyinh~tk~TtwedPr~~~~~ 47 (54)
T 1wmv_A 9 AGDLPYGWEQETDE-NGQVFFVDHINKRTTYLDPRLAFTV 47 (54)
T ss_dssp SSCSCTTEEEEECT-TSCEEEEESSSCCEESSCTTSSCCC
T ss_pred CCCCCcCcEEEECC-CCCEEEEeCCCCCEeecCCCCcccc
Confidence 35799999999996 9999999999999999999986543
No 60
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.81 E-value=5.1e-09 Score=80.51 Aligned_cols=39 Identities=15% Similarity=0.373 Sum_probs=34.4
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccccc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETSSR 238 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~ 238 (478)
..+||+||++++|+ +|++||+||+|++|+|++|......
T Consensus 9 ~~~LP~GWe~~~~~-~G~~Yyinh~tk~TtwedPr~~~~~ 47 (54)
T 1wmv_A 9 AGDLPYGWEQETDE-NGQVFFVDHINKRTTYLDPRLAFTV 47 (54)
T ss_dssp SSCSCTTEEEEECT-TSCEEEEESSSCCEESSCTTSSCCC
T ss_pred CCCCCcCcEEEECC-CCCEEEEeCCCCCEeecCCCCcccc
Confidence 34799999999998 4999999999999999999876543
No 61
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.80 E-value=5.2e-09 Score=81.42 Aligned_cols=36 Identities=28% Similarity=0.586 Sum_probs=33.2
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
...||.+|++++|. +|++|||||+|++|+|++|+..
T Consensus 12 ~~~LP~GWe~~~~~-~Gr~Yyinh~tk~TtWe~Pr~~ 47 (57)
T 2ysd_A 12 LGPLPENWEMAYTE-NGEVYFIDHNTKTTSWLDPRCL 47 (57)
T ss_dssp CCSCCSSEEEEECS-SCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCcCcEEEECC-CCCEEEEECCCCcEecCCCCCc
Confidence 35799999999996 9999999999999999999974
No 62
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.79 E-value=4.9e-09 Score=75.57 Aligned_cols=32 Identities=38% Similarity=0.831 Sum_probs=30.1
Q ss_pred CCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 246 SLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 246 ~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.||.||+++.|. +| +||||+.|++||||+|..
T Consensus 3 ~LP~GWe~~~d~-~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 3 DLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp CSCTTEEEEECS-SC-EEEEETTTTEEESSCCCC
T ss_pred cCCCCceEEEeC-CC-CEEEecCCCCEeccCCCC
Confidence 689999999997 88 999999999999999975
No 63
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.79 E-value=6.2e-09 Score=75.49 Aligned_cols=36 Identities=39% Similarity=0.731 Sum_probs=32.7
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
...++|..|+++.+++ |+.||||..|++++|++|.+
T Consensus 4 ~~~~~~~~W~e~~~~~-G~~YYyN~~T~eS~We~P~~ 39 (40)
T 2ysi_A 4 GSSGTEEIWVENKTPD-GKVYYYNARTRESAWTKPDG 39 (40)
T ss_dssp CCCCCCCSEEEEECTT-SCEEEEETTTCCEESSCCSC
T ss_pred ccCCCCCCCEEEECCC-CCEEEEECCCCCEEeCCCCC
Confidence 4567899999999986 99999999999999999975
No 64
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.75 E-value=1.7e-09 Score=82.61 Aligned_cols=36 Identities=33% Similarity=0.635 Sum_probs=33.4
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
..||.+|++++|+.+|+.||||+.|++|+|++|...
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 468999999999888999999999999999999875
No 65
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.73 E-value=4e-09 Score=80.64 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=33.3
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
..||.+|++++|..+|+.||||+.|++||||+|...
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 458999999999889999999999999999999874
No 66
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=4.5e-09 Score=82.70 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=32.3
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
...||.+|++++|+ +|++|||||.|++|+|++|+.
T Consensus 11 ~~~LP~GWE~~~d~-~Gr~YYvnh~tk~T~We~P~~ 45 (60)
T 2yse_A 11 ELELPAGWEKIEDP-VYGIYYVDHINRKTQYENPVL 45 (60)
T ss_dssp CSSCCSSEEEEECS-SSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCCcEEEECC-CCCEEEEeCCCCCeeccCCCc
Confidence 35799999999996 899999999999999999986
No 67
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.73 E-value=7.6e-09 Score=80.25 Aligned_cols=36 Identities=39% Similarity=0.889 Sum_probs=32.2
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
....||+||+++.|+ +| .||||+.|++|||++|...
T Consensus 16 ~~~~LPpGW~~~~D~-sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 16 TDSDLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp SCSCCCTTEEEEEET-TE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCCeEeecC-CC-CEEEEcCCCCCccCCCCCC
Confidence 455799999999999 59 9999999999999999653
No 68
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.72 E-value=1e-08 Score=74.19 Aligned_cols=33 Identities=27% Similarity=0.618 Sum_probs=29.7
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPG 278 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr 278 (478)
...||.||++++|+ +| .||||+.|++||||+|.
T Consensus 6 ~~~LP~GWe~~~~~-~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 6 SGGLPPGWRKIHDA-AG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCTTEEEEEET-TE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCcEEEEcC-CC-CEEEEcCCCCEeccCCC
Confidence 35799999999998 58 59999999999999995
No 69
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.66 E-value=1.1e-08 Score=75.48 Aligned_cols=39 Identities=28% Similarity=0.589 Sum_probs=34.3
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
....+||+||+++.++. |+.||+||+|++|+|++|....
T Consensus 4 P~~~~LP~GWe~~~~~~-gr~y~~n~~t~~t~W~dPr~~~ 42 (46)
T 1jmq_A 4 PDDVPLPAGWEMAKTSS-GQRYFKNHIDQTTTWQDPRKAM 42 (46)
T ss_dssp CSSCCCCTTBCCBCCSS-CCCBEEETTTTEEESSCTTTSS
T ss_pred CCCCCCCcCcEEEEcCC-CceEEEEecCCceeecCCCchh
Confidence 34568999999999975 9999999999999999998653
No 70
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.65 E-value=1.2e-08 Score=75.30 Aligned_cols=35 Identities=26% Similarity=0.604 Sum_probs=32.3
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
..||.||++++++ +||.||+||+|++|+|++|+..
T Consensus 7 ~~LP~GWe~~~~~-~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 7 VPLPAGWEMAKTS-SGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp CCCCTTBCCBCCS-SCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCcCcEEEEcC-CCceEEEEecCCceeecCCCch
Confidence 4799999999985 9999999999999999999975
No 71
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.61 E-value=3.5e-08 Score=70.21 Aligned_cols=33 Identities=42% Similarity=0.858 Sum_probs=30.3
Q ss_pred CCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 202 LLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 202 LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
+..+|+++.+++ |+.||||..|++++|++|.++
T Consensus 4 ~~~~W~e~~~~~-G~~YYyN~~T~es~We~P~~~ 36 (37)
T 1e0l_A 4 AVSEWTEYKTAD-GKTYYYNNRTLESTWEKPQEL 36 (37)
T ss_dssp SSCSCEEEECTT-SCEEEEETTTTEEESSCCSSC
T ss_pred CCCCeEEEECCC-CCEEEEECCCCCEEecCCCcc
Confidence 457899999997 999999999999999999865
No 72
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.61 E-value=4.5e-08 Score=69.65 Aligned_cols=33 Identities=36% Similarity=0.764 Sum_probs=30.2
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 247 LMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 247 LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
...+|.++.++ +|++||||..|++|+||+|..+
T Consensus 4 ~~~~W~e~~~~-~G~~YYyN~~T~es~We~P~~~ 36 (37)
T 1e0l_A 4 AVSEWTEYKTA-DGKTYYYNNRTLESTWEKPQEL 36 (37)
T ss_dssp SSCSCEEEECT-TSCEEEEETTTTEEESSCCSSC
T ss_pred CCCCeEEEECC-CCCEEEEECCCCCEEecCCCcc
Confidence 46789999988 6999999999999999999875
No 73
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.61 E-value=3.5e-08 Score=71.58 Aligned_cols=35 Identities=37% Similarity=0.722 Sum_probs=31.2
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
.+++.+|.++.++ +|++||||..|++|+||+|..+
T Consensus 6 ~~~~~~W~e~~~~-~G~~YYyN~~T~eS~We~P~~~ 40 (40)
T 2ysi_A 6 SGTEEIWVENKTP-DGKVYYYNARTRESAWTKPDGV 40 (40)
T ss_dssp CCCCCSEEEEECT-TSCEEEEETTTCCEESSCCSCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEEeCCCCCC
Confidence 3578899999976 9999999999999999999863
No 74
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.58 E-value=2.6e-08 Score=72.56 Aligned_cols=34 Identities=41% Similarity=0.869 Sum_probs=27.2
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVE 234 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~ 234 (478)
..+|.+|+++++++ |++||||..|++++|++|.+
T Consensus 8 ~~~~~~W~e~~~~~-G~~YYyN~~T~eS~We~P~e 41 (41)
T 1ywi_A 8 GSAKSMWTEHKSPD-GRTYYYNTETKQSTWEKPDD 41 (41)
T ss_dssp ----CCEEEEEETT-TEEEEEETTTTEEEESCC--
T ss_pred CCCCCCcEEEECCC-CCEEEEECCCCCEEeCCCCC
Confidence 45788999999996 99999999999999999963
No 75
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.57 E-value=4e-08 Score=66.02 Aligned_cols=27 Identities=22% Similarity=0.511 Sum_probs=25.0
Q ss_pred CCcEEEEecCCCcEEEEeCCCCeeeccCC
Q 046743 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHP 277 (478)
Q Consensus 249 ~GWEE~~DpssGR~YYyN~~TgeTqWEdP 277 (478)
.+|+ +|.++|++||||..|++|+||.|
T Consensus 1 ~gWe--~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE--IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE--EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe--EECCCCCeEEEECCCCCEeccCC
Confidence 4799 78889999999999999999988
No 76
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.54 E-value=5.4e-08 Score=70.82 Aligned_cols=34 Identities=35% Similarity=0.638 Sum_probs=27.2
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPG 278 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr 278 (478)
...++.+|+++.++ +|++||||..|++++||+|.
T Consensus 7 ~~~~~~~W~e~~~~-~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEET-TTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEECC-CCCEEEEECCCCCEEeCCCC
Confidence 34578899999988 99999999999999999996
No 77
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.49 E-value=7.8e-08 Score=74.62 Aligned_cols=34 Identities=35% Similarity=0.766 Sum_probs=31.1
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
...||+||+++.|+ +| .||+|+.|++||||+|..
T Consensus 17 ~~~LPpGW~~~~D~-sG-tYY~h~~T~tTQWerP~~ 50 (55)
T 2e45_A 17 DSDLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGR 50 (55)
T ss_dssp CSCCCTTEEEEEET-TE-EEEEETTTCCEESSCCCC
T ss_pred CCCCCCCCeEeecC-CC-CEEEEcCCCCCccCCCCC
Confidence 34799999999999 99 999999999999999954
No 78
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.49 E-value=6.7e-08 Score=88.64 Aligned_cols=38 Identities=53% Similarity=0.938 Sum_probs=30.1
Q ss_pred CCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 199 REKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
..+||+||++++|+.+|++|||||.|++|+|++|....
T Consensus 7 ~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~ 44 (166)
T 3tc5_A 7 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNS 44 (166)
T ss_dssp ---CCTTEEEEECTTTCCEEEEETTTCCEESSCC----
T ss_pred CCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCc
Confidence 46799999999997679999999999999999998653
No 79
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.48 E-value=5.6e-08 Score=65.30 Aligned_cols=27 Identities=30% Similarity=0.582 Sum_probs=24.8
Q ss_pred CCcEEEEcCCCCceeeeeCCCCCeeccCC
Q 046743 204 PGWVEAKDPASGASYYYNESTGKSQWERP 232 (478)
Q Consensus 204 pGWEe~~Dp~SGR~YYyN~~TgeTTWErP 232 (478)
++|+ +|+.+|+.||||..|++|+|++|
T Consensus 1 ~gWe--~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE--IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE--EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe--EECCCCCeEEEECCCCCEeccCC
Confidence 4899 77778999999999999999998
No 80
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.30 E-value=3.4e-07 Score=83.96 Aligned_cols=36 Identities=36% Similarity=0.731 Sum_probs=30.3
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSS 280 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~ 280 (478)
.+||+||++++|+.+|++|||||.|++|+|++|+..
T Consensus 8 ~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp --CCTTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 579999999999889999999999999999999763
No 81
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.07 E-value=2.2e-06 Score=65.18 Aligned_cols=35 Identities=29% Similarity=0.649 Sum_probs=31.1
Q ss_pred CCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCCCC
Q 046743 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKPVA 284 (478)
Q Consensus 249 ~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~pv~ 284 (478)
..|.++.++ +|+.||||..|++++||+|..+....
T Consensus 7 ~~W~e~~s~-~G~~YYyN~~T~eS~WekP~~~~~~~ 41 (50)
T 2dk1_A 7 GRWVEGITS-EGYHYYYDLISGASQWEKPEGFQGDL 41 (50)
T ss_dssp CCEEECCCS-TTCCCEEESSSCCEESSCCTTCCCCC
T ss_pred CCeEEEECC-CCCEEEEECCCCCEEeeCChhhhhhH
Confidence 579999987 79999999999999999999886544
No 82
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.06 E-value=2.9e-06 Score=64.47 Aligned_cols=35 Identities=37% Similarity=0.738 Sum_probs=31.1
Q ss_pred CCcEEEEcCCCCceeeeeCCCCCeeccCCCcccccC
Q 046743 204 PGWVEAKDPASGASYYYNESTGKSQWERPVETSSRA 239 (478)
Q Consensus 204 pGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~~ 239 (478)
..|.++++++ |+.||||..|++++|++|..+....
T Consensus 7 ~~W~e~~s~~-G~~YYyN~~T~eS~WekP~~~~~~~ 41 (50)
T 2dk1_A 7 GRWVEGITSE-GYHYYYDLISGASQWEKPEGFQGDL 41 (50)
T ss_dssp CCEEECCCST-TCCCEEESSSCCEESSCCTTCCCCC
T ss_pred CCeEEEECCC-CCEEEEECCCCCEEeeCChhhhhhH
Confidence 4699999997 9999999999999999999875443
No 83
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=97.98 E-value=2.4e-06 Score=83.85 Aligned_cols=35 Identities=29% Similarity=0.583 Sum_probs=32.4
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
.+||++||++.+++ |++||+||+|++|+|+.|...
T Consensus 10 ~~l~~~we~~~~~~-~~~y~~~h~~~tt~w~~p~~~ 44 (261)
T 1eg3_A 10 TSVQGPWERAISPN-KVPYYINHETQTTCWDHPKMT 44 (261)
T ss_dssp TTCCTTEEEEECTT-SCEEEEETTTTEEESSCHHHH
T ss_pred CCCCCCcceeECCC-CCeEeecCCcccccCCCCchh
Confidence 58999999999996 999999999999999999843
No 84
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=8.8e-06 Score=66.45 Aligned_cols=33 Identities=21% Similarity=0.477 Sum_probs=30.0
Q ss_pred CCcEEEEecCCCcEEEEeCCCCeeeccCCCCCCC
Q 046743 249 EDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSKP 282 (478)
Q Consensus 249 ~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~p 282 (478)
..|.+++.. +||+||||..|++|+|++|.++..
T Consensus 20 t~W~~v~T~-dGR~fyyN~~Tk~S~WekP~eLk~ 52 (73)
T 2dk7_A 20 TPWCVVWTG-DERVFFYNPTTRLSMWDRPDDLIG 52 (73)
T ss_dssp SSCEEEEES-SSCEEEEETTTTEECSSCCTTTTT
T ss_pred CCcEEEECC-CCCEEEecCcccceeccCChHhcC
Confidence 579999976 999999999999999999999763
No 85
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=97.88 E-value=4.9e-06 Score=81.70 Aligned_cols=34 Identities=29% Similarity=0.586 Sum_probs=31.8
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.++|+|||+++++ +|++||+||+|++|+|++|+.
T Consensus 10 ~~l~~~we~~~~~-~~~~y~~~h~~~tt~w~~p~~ 43 (261)
T 1eg3_A 10 TSVQGPWERAISP-NKVPYYINHETQTTCWDHPKM 43 (261)
T ss_dssp TTCCTTEEEEECT-TSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCcceeECC-CCCeEeecCCcccccCCCCch
Confidence 4789999999987 999999999999999999985
No 86
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.82 E-value=1.1e-05 Score=65.81 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=30.9
Q ss_pred CCcEEEEcCCCCceeeeeCCCCCeeccCCCccccc
Q 046743 204 PGWVEAKDPASGASYYYNESTGKSQWERPVETSSR 238 (478)
Q Consensus 204 pGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~~~ 238 (478)
..|.++++.+ ||+||||..|++++|++|.++...
T Consensus 20 t~W~~v~T~d-GR~fyyN~~Tk~S~WekP~eLk~~ 53 (73)
T 2dk7_A 20 TPWCVVWTGD-ERVFFYNPTTRLSMWDRPDDLIGR 53 (73)
T ss_dssp SSCEEEEESS-SCEEEEETTTTEECSSCCTTTTTC
T ss_pred CCcEEEECCC-CCEEEecCcccceeccCChHhcCH
Confidence 4699999998 999999999999999999988644
No 87
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=97.78 E-value=7.4e-06 Score=85.11 Aligned_cols=38 Identities=21% Similarity=0.459 Sum_probs=34.3
Q ss_pred CCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCccc
Q 046743 198 DREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVETS 236 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~~ 236 (478)
...+||+|||+++|+. |++||+||+|++|||++|+...
T Consensus 5 ~~~~lP~gWe~~~~~~-g~~y~i~h~~~~t~w~~Pr~~~ 42 (429)
T 3olm_A 5 QLGPLPSGWEMRLTNT-ARVYFVDHNTKTTTWDDPRLPS 42 (429)
T ss_dssp CCCCCCTTCCCCCSSC-CCCCEEETTTTEEESSCTTSCC
T ss_pred cCCCCCCCceeEECCC-CCeEEEeCCCcceeccCCCCCc
Confidence 3468999999999985 9999999999999999998764
No 88
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=97.73 E-value=1.1e-05 Score=83.76 Aligned_cols=37 Identities=16% Similarity=0.404 Sum_probs=33.9
Q ss_pred CcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCC
Q 046743 244 HLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSK 281 (478)
Q Consensus 244 ~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~ 281 (478)
.++||+|||+++++ +|++||+||+|++|+|++|+...
T Consensus 6 ~~~lP~gWe~~~~~-~g~~y~i~h~~~~t~w~~Pr~~~ 42 (429)
T 3olm_A 6 LGPLPSGWEMRLTN-TARVYFVDHNTKTTTWDDPRLPS 42 (429)
T ss_dssp CCCCCTTCCCCCSS-CCCCCEEETTTTEEESSCTTSCC
T ss_pred CCCCCCCceeEECC-CCCeEEEeCCCcceeccCCCCCc
Confidence 46899999999987 99999999999999999999853
No 89
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=97.43 E-value=0.00012 Score=66.98 Aligned_cols=36 Identities=31% Similarity=0.646 Sum_probs=33.5
Q ss_pred CCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 200 EKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 200 e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
..||++|+++++..+|+.||||..|++.+|++|...
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~v 41 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYGT 41 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTTC
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCcccC
Confidence 569999999999999999999999999999999753
No 90
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=96.84 E-value=0.00076 Score=61.74 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=32.6
Q ss_pred cCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 245 LSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 245 ~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
..||.+|+++++.+.|+.||||..|++++|+.|..
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 35899999999999999999999999999999975
No 91
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=93.28 E-value=0.091 Score=43.19 Aligned_cols=38 Identities=26% Similarity=0.502 Sum_probs=33.7
Q ss_pred CCCCCCCCCcEEEEcCCCCceeeeeCCCCCeeccCCCcc
Q 046743 197 DDREKLLPGWVEAKDPASGASYYYNESTGKSQWERPVET 235 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~SGR~YYyN~~TgeTTWErP~~~ 235 (478)
+..++||.||....-. +|-+-|++..|+.+||.+|-..
T Consensus 24 ~~~~~LPeGW~~v~H~-SGmP~YlH~~trV~T~SrPY~l 61 (79)
T 3le4_A 24 PPTEPLPDGWIMTFHN-SGVPVYLHRESRVVTWSRPYFL 61 (79)
T ss_dssp CCCCCCCTTEEEEECT-TSSEEEEETTTTEEESSCCCCC
T ss_pred CcCCcCCCccEEEEec-CCceEEEeccceEEeccCCeEe
Confidence 4467899999998876 6999999999999999999765
No 92
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=88.18 E-value=0.52 Score=38.75 Aligned_cols=38 Identities=24% Similarity=0.469 Sum_probs=33.0
Q ss_pred CCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCCCC
Q 046743 243 SHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGSSK 281 (478)
Q Consensus 243 a~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~~~ 281 (478)
...+||+||...... +|-+-|++..|+..+|-+|=...
T Consensus 25 ~~~~LPeGW~~v~H~-SGmP~YlH~~trV~T~SrPY~lG 62 (79)
T 3le4_A 25 PTEPLPDGWIMTFHN-SGVPVYLHRESRVVTWSRPYFLG 62 (79)
T ss_dssp CCCCCCTTEEEEECT-TSSEEEEETTTTEEESSCCCCCT
T ss_pred cCCcCCCccEEEEec-CCceEEEeccceEEeccCCeEec
Confidence 346799999999865 99999999999999999997653
No 93
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=52.12 E-value=9.5 Score=30.59 Aligned_cols=27 Identities=37% Similarity=0.759 Sum_probs=18.3
Q ss_pred CCCCCCCcEEEEcCC-CC------ceeeeeCCCCC
Q 046743 199 REKLLPGWVEAKDPA-SG------ASYYYNESTGK 226 (478)
Q Consensus 199 ~e~LPpGWEe~~Dp~-SG------R~YYyN~~Tge 226 (478)
+.+||.||+..+-.. +| -+|||.+ +++
T Consensus 10 ~p~Lp~GW~R~~~~R~~g~s~~k~DvyY~sP-~Gk 43 (72)
T 2ky8_A 10 CPALPPGWKKEEVIRKSGLSAGKSDVYYFSP-SGK 43 (72)
T ss_dssp CSSSCTTCEEEEEECCSSTTTTCEEEEEECT-TCC
T ss_pred CCCCCCCCEEEEEEecCCCCCCceEEEEECC-CCC
Confidence 458999998777532 24 3799977 554
No 94
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=51.40 E-value=11 Score=30.47 Aligned_cols=31 Identities=32% Similarity=0.465 Sum_probs=20.8
Q ss_pred CCCCCCCCCcEEEEcCC-C------CceeeeeCCCCCee
Q 046743 197 DDREKLLPGWVEAKDPA-S------GASYYYNESTGKSQ 228 (478)
Q Consensus 197 ~~~e~LPpGWEe~~Dp~-S------GR~YYyN~~TgeTT 228 (478)
-.+..||.||++.+-.. + .-+|||.+ +++.-
T Consensus 6 ~~~p~LP~GW~Re~~~R~~g~s~gk~DvyY~sP-~Gkk~ 43 (75)
T 1d9n_A 6 LDCPALGPGWKRREVFRKSGATCGRSDTYYQSP-TGDRI 43 (75)
T ss_dssp EECTTTCSSCEEEECSSSSSCTTCCCCEEEECS-SSCEE
T ss_pred ccCCCCCCCCEEEEEEecCCCCCCceEEEEECC-CCCee
Confidence 34668999998877532 2 23799988 55543
No 95
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=40.85 E-value=19 Score=30.67 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=19.9
Q ss_pred CCCCCCCCcEEEEcC-CCC------ceeeeeCCCCCeec
Q 046743 198 DREKLLPGWVEAKDP-ASG------ASYYYNESTGKSQW 229 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp-~SG------R~YYyN~~TgeTTW 229 (478)
.+..||.||+..+-. .+| -+|||.+ |++.--
T Consensus 20 ~~~~lP~GW~re~~~R~~G~s~gk~DvYY~sP-~GkkfR 57 (97)
T 3c2i_A 20 DDPTLPEGWTRKLKQRKSGRSAGKYDVYLINP-QGKAFR 57 (97)
T ss_dssp CCTTSCTTCEEEEEECCSSTTTTCEEEEEECT-TSCEEC
T ss_pred CCCCCCCCCEEEEEEecCCCCCCcceEEEECC-CCCEEE
Confidence 345799999766642 222 4799987 565443
No 96
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=28.10 E-value=55 Score=30.67 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=40.2
Q ss_pred CCceeeeeCCCCCeeccCCCcccccCCC-CCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCCC
Q 046743 214 SGASYYYNESTGKSQWERPVETSSRAQT-PSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPGS 279 (478)
Q Consensus 214 SGR~YYyN~~TgeTTWErP~~~~~~~~~-pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr~ 279 (478)
.|..|.+|..|++..|..+......... ...+....+ ..++-..+|.+|.||..|++..|+.+..
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFG-AAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETT-EEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECC-EEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 4889999999999999865532111000 000011112 2334344789999999999999987643
No 97
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.71 E-value=1e+02 Score=30.68 Aligned_cols=66 Identities=17% Similarity=0.230 Sum_probs=43.3
Q ss_pred EEcCCCCceeeeeCCCCCeeccCCCcc-cccCCCCCCcCCCCCcEEEEec-CCCcEEEEeCCCCeeecc
Q 046743 209 AKDPASGASYYYNESTGKSQWERPVET-SSRAQTPSHLSLMEDWIEAVDE-TSGHKYYYNKRTHVSQWV 275 (478)
Q Consensus 209 ~~Dp~SGR~YYyN~~TgeTTWErP~~~-~~~~~~pa~~~LP~GWEE~~Dp-ssGR~YYyN~~TgeTqWE 275 (478)
..+.+ |..|-+|..|++..|.-.... ........+.....+..-.+.+ .+|+.|.+|..++...|.
T Consensus 15 v~t~d-G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 15 AADVE-GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEETT-SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred EEeCC-CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence 44665 999999999999999876551 1111000011112334445554 699999999999988884
No 98
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=24.05 E-value=70 Score=29.93 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=40.6
Q ss_pred CCceeeeeCCCCCeeccCCCcccccCCCCCCcCCCCCcEEEEecCCCcEEEEeCCCCeeeccCCC
Q 046743 214 SGASYYYNESTGKSQWERPVETSSRAQTPSHLSLMEDWIEAVDETSGHKYYYNKRTHVSQWVHPG 278 (478)
Q Consensus 214 SGR~YYyN~~TgeTTWErP~~~~~~~~~pa~~~LP~GWEE~~DpssGR~YYyN~~TgeTqWEdPr 278 (478)
.|..|.+|..|++..|..+...... +...+=..++-...|.+|-||..|++..|..+.
T Consensus 248 ~g~l~~~d~~tG~~~w~~~~~~~~~-------~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKRELGSVND-------FIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp TSCEEEEETTTCCEEEEECCCCEEE-------EEEETTEEEEEETTCCEEEEETTTCCEEEEECT
T ss_pred CcEEEEEECCCCcEEeeccCCCCCC-------ceEECCEEEEEcCCCeEEEEECCCCcEEEeecc
Confidence 4899999999999999977432110 111222333333478999999999999998763
No 99
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=20.14 E-value=54 Score=29.38 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=17.3
Q ss_pred CCCCCCCCcEEEEcC-CCC------ceeeeeCC
Q 046743 198 DREKLLPGWVEAKDP-ASG------ASYYYNES 223 (478)
Q Consensus 198 ~~e~LPpGWEe~~Dp-~SG------R~YYyN~~ 223 (478)
.+..||.||+..+-. .+| -+|||.+.
T Consensus 34 ~~~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~ 66 (133)
T 1ub1_A 34 DDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ 66 (133)
T ss_dssp CCCCBTTBCEEEEEECCCSSSCCSEEEEEECTT
T ss_pred CCCCCCCCCEEEEEEecCCCCCCceeEEEECCC
Confidence 456799999776642 223 37999773
Done!