Query 046745
Match_columns 132
No_of_seqs 165 out of 1030
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1th0_A SMT3-, sentrin-specific 100.0 2.7E-33 9.2E-38 198.9 13.7 117 1-132 106-224 (226)
2 2xph_A Sentrin-specific protea 100.0 5.6E-33 1.9E-37 198.6 14.0 117 1-132 118-236 (238)
3 1euv_A ULP1 protease; SUMO hyd 100.0 1.6E-30 5.4E-35 184.1 14.0 115 1-132 104-219 (221)
4 2bkr_A Sentrin-specific protea 99.9 3.5E-28 1.2E-32 171.0 7.8 109 1-130 86-208 (212)
5 2oix_A Xanthomonas outer prote 99.9 1.7E-26 5.8E-31 159.5 8.9 106 1-130 65-180 (186)
6 3eay_A Sentrin-specific protea 99.9 2.1E-24 7.1E-29 159.1 13.6 117 1-129 124-311 (323)
7 4ekf_A Adenain; alpha and beta 97.7 0.00035 1.2E-08 47.4 9.4 84 8-104 52-135 (204)
8 3k8u_A Putative ABC transporte 59.3 12 0.00043 23.6 3.9 24 84-108 10-33 (156)
9 3zua_A CLD, alpha-hemolysin tr 35.1 57 0.0019 20.0 4.1 24 8-31 86-109 (142)
10 1sx5_A Type II restriction enz 33.2 7 0.00024 27.3 -0.6 19 1-19 120-139 (244)
11 2bu3_A ALR0975 protein; phytoc 31.1 55 0.0019 23.1 3.8 23 81-103 71-93 (254)
12 3rnv_A HC-Pro, helper componen 30.6 54 0.0018 21.4 3.4 22 13-34 106-127 (158)
13 1p22_C Beta-catenin, Pro2286; 27.5 14 0.00048 16.5 0.1 10 85-94 8-18 (26)
No 1
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A
Probab=100.00 E-value=2.7e-33 Score=198.88 Aligned_cols=117 Identities=21% Similarity=0.426 Sum_probs=94.6
Q ss_pred CEEeeeeCCeeEEEEEeCCCCeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCcccc--c
Q 046745 1 VYLPIFMNDHWVLGVVDILGGKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPIV--R 78 (132)
Q Consensus 1 i~iPi~~~~HW~L~vi~~~~~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~~--~ 78 (132)
||+|||.++||+|+|||+++++|.+||||++.. .. ..+.+++++..... ++.+. .++.++|++. .
T Consensus 106 i~iPin~~~HW~l~vi~~~~~~i~~~DSl~~~~-~~----~~~~l~~~l~~e~~-----~k~~~---~~~~~~w~~~~~~ 172 (226)
T 1th0_A 106 ILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKG-HR----ICEILLQYLQDESK-----TKRNS---DLNLLEWTHHSMK 172 (226)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEECTTCCCC-HH----HHHHHHHHHHHHHH-----HHTSC---CCCGGGCEEEECC
T ss_pred EEEeEEeCcEEEEEEEEcCCCceEEEcCCCCCc-hH----HHHHHHHHHHHHHH-----HhcCC---CCCcccceecccc
Confidence 689999999999999999999999999999864 22 23445554444322 22221 3456778863 2
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHhccCCCCCCCcccchHHHHHHHHHHHhcCC
Q 046745 79 VRDIPQQKSGGDCGAFLLRYLEVLAHELDVNSYCQQDHVTQFRQALAVKLFGHR 132 (132)
Q Consensus 79 ~~~~P~Q~n~~DCGvfvl~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~l~~~~ 132 (132)
..++|||.||+|||||||+||++++.|.++ +|+|+ +|+.+|++|+.||+++|
T Consensus 173 ~~~~PqQ~Ng~DCGvfvl~~~~~~~~~~~~-~f~q~-dm~~~R~~~~~ei~~~~ 224 (226)
T 1th0_A 173 PHEIPQQLNGSDCGMFTCKYADYISRDKPI-TFTQH-QMPLFRKKMVWEILHQQ 224 (226)
T ss_dssp TTTSCCCCSSSCHHHHHHHHHHHHTTTCCC-CCCGG-GHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhCCCCC-ccChh-hHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999988 79999 99999999999999986
No 2
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A
Probab=100.00 E-value=5.6e-33 Score=198.61 Aligned_cols=117 Identities=26% Similarity=0.550 Sum_probs=94.9
Q ss_pred CEEeeeeCCeeEEEEEeCCCCeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCcccc--c
Q 046745 1 VYLPIFMNDHWVLGVVDILGGKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPIV--R 78 (132)
Q Consensus 1 i~iPi~~~~HW~L~vi~~~~~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~~--~ 78 (132)
||+|||.+.||+|++||+++++|.+||||++... . .++.+++++...+. ++.+. .++..+|++. .
T Consensus 118 i~iPin~~~HW~L~vi~~~~~~i~~~DSl~~~~~-~----~~~~l~~~L~~e~~-----~k~~~---~~~~~~w~~~~~~ 184 (238)
T 2xph_A 118 LLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINN-E----ACRILLQYLKQESI-----DKKRK---EFDTNGWQLFSKK 184 (238)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEECTTCCCCH-H----HHHHHHHHHHHHHH-----HHHCS---CCCCTTCEEEECC
T ss_pred EEEcccCCCceEEEEEEcccceEEEeecccCCCH-H----HHHHHHHHHHHHHH-----HhcCC---CcCcccceecccC
Confidence 6899999999999999999999999999998643 2 23444554444332 11121 3456788864 2
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHhccCCCCCCCcccchHHHHHHHHHHHhcCC
Q 046745 79 VRDIPQQKSGGDCGAFLLRYLEVLAHELDVNSYCQQDHVTQFRQALAVKLFGHR 132 (132)
Q Consensus 79 ~~~~P~Q~n~~DCGvfvl~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~l~~~~ 132 (132)
..++|||.||+|||||||+||++++.+.++ +|+|+ +|+.+|++|+.+|+++|
T Consensus 185 ~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~-~f~q~-dm~~~R~~m~~eil~~~ 236 (238)
T 2xph_A 185 SQEIPQQMNGSDCGMFACKYADCITKDRPI-NFTQQ-HMPYFRKRMVWEILHRK 236 (238)
T ss_dssp SSSSCCCSBGGGHHHHHHHHHHHHHTTCCC-CCCGG-GHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCCC-CcChh-hHHHHHHHHHHHHHhCC
Confidence 568999999999999999999999999987 79999 99999999999999986
No 3
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A
Probab=99.97 E-value=1.6e-30 Score=184.07 Aligned_cols=115 Identities=21% Similarity=0.355 Sum_probs=89.8
Q ss_pred CEEeeee-CCeeEEEEEeCCCCeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCcccccc
Q 046745 1 VYLPIFM-NDHWVLGVVDILGGKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPIVRV 79 (132)
Q Consensus 1 i~iPi~~-~~HW~L~vi~~~~~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 79 (132)
||+|||. ++||+|++|++++++|.+||||++..+.. ...+++.+++ ++..+. .++. ..+|++. .
T Consensus 104 i~iPin~~~~HW~l~vi~~~~~~i~~~DSl~~~~~~~-~~~i~~~l~~----~l~~e~-~~~~--------~~~~~~~-~ 168 (221)
T 1euv_A 104 IFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNAM-SFAILTDLQK----YVMEES-KHTI--------GEDFDLI-H 168 (221)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEECSSCCSCCHH-HHHHHHHHHH----HHHHHT-TSSS--------CTTCEEE-E
T ss_pred EEEEEEcCCCeEEEEEEEcCCCEEEEEecCCCCCcch-HHHHHHHHHH----HHHHHH-HHhc--------CCCceEe-e
Confidence 6899999 59999999999999999999999754432 1123444444 343222 1111 1346653 4
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHhccCCCCCCCcccchHHHHHHHHHHHhcCC
Q 046745 80 RDIPQQKSGGDCGAFLLRYLEVLAHELDVNSYCQQDHVTQFRQALAVKLFGHR 132 (132)
Q Consensus 80 ~~~P~Q~n~~DCGvfvl~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~l~~~~ 132 (132)
.++|||.||+|||||||+||++++.|.++ +|+++ +|+.+|++|+.+|++++
T Consensus 169 ~~~PqQ~N~~DCGvfv~~~~~~~~~~~~l-~f~~~-d~~~~R~~i~~~Il~~~ 219 (221)
T 1euv_A 169 LDCPQQPNGYDCGIYVCMNTLYGSADAPL-DFDYK-DAIRMRRFIAHLILTDA 219 (221)
T ss_dssp ECCCCCSSSSTHHHHHHHHHHHHHTTCCC-CCCHH-HHHHHHHHHHHHHHTTT
T ss_pred cCCCCCCCCcCHHHHHHHHHHHHhCCCCC-CcCHH-HHHHHHHHHHHHHHhcc
Confidence 68999999999999999999999999998 79999 99999999999999874
No 4
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A
Probab=99.95 E-value=3.5e-28 Score=171.01 Aligned_cols=109 Identities=21% Similarity=0.219 Sum_probs=82.7
Q ss_pred CEEeeee-------CCeeEEEEEeCCCCeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCC
Q 046745 1 VYLPIFM-------NDHWVLGVVDILGGKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIP 73 (132)
Q Consensus 1 i~iPi~~-------~~HW~L~vi~~~~~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 73 (132)
||+|||. ++||+|+||++++++|.+||||++.. ... .+.+.+.|..++.. .. .+
T Consensus 86 i~iPIn~n~~~~~~~~HW~L~vi~~~~~~i~~~DSl~~~n-~~~----~~~l~~~l~~~l~~------~~--------~~ 146 (212)
T 2bkr_A 86 VFLAINDNSNQAAGGSHWSLLVYLQDKNSFFHYDSHSRSN-SVH----AKQVAEKLEAFLGR------KG--------DK 146 (212)
T ss_dssp EEEEEECCCSSSSBCCCEEEEEEEGGGTEEEEECSSTTTT-HHH----HHHHHHHHHHHHSC------TT--------CC
T ss_pred EEEEEecCCCCCCCCCCeEEEEEEecCCeEEEEeCCCCCC-HHH----HHHHHHHHHHHhCC------cc--------cc
Confidence 6899994 79999999999999999999999864 332 23344444444421 11 12
Q ss_pred cccccccCCCCCCCCCChhHHHHHHHHHHhccCC----C---CCCCcccchHHHHHHHHHHHhc
Q 046745 74 WPIVRVRDIPQQKSGGDCGAFLLRYLEVLAHELD----V---NSYCQQDHVTQFRQALAVKLFG 130 (132)
Q Consensus 74 w~~~~~~~~P~Q~n~~DCGvfvl~~~~~~~~~~~----~---~~~~~~~~~~~~R~~l~~~l~~ 130 (132)
|++. ..++|||.||+|||||||+||++++.+.. + ..|+++ +++.+|++|+..|.+
T Consensus 147 ~~~~-~~~~PqQ~N~~DCGvfvl~~~~~l~~~~~~~~~~~~~~~~~~~-~i~~~R~~i~~lI~~ 208 (212)
T 2bkr_A 147 LAFV-EEKAPAQQNSYDCGMYVICNTEALCQNFFRQQTESLLQLLTPA-YITKKRGEWKDLIAT 208 (212)
T ss_dssp CCEE-ECCCCCCSSSSTHHHHHHHHHHHHHHHHHSCCCCCHHHHCCHH-HHHHHHHHHHHHHHH
T ss_pred ceEe-ECCCCCCCCCCcHHHHHHHHHHHHHHHhhhcCcccccccCCHH-HHHHHHHHHHHHHHH
Confidence 4443 46899999999999999999999998751 1 257888 999999999988764
No 5
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A
Probab=99.93 E-value=1.7e-26 Score=159.54 Aligned_cols=106 Identities=29% Similarity=0.303 Sum_probs=76.4
Q ss_pred CEEeeee-CCeeEEEEEeCCCCeE---EEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCccc
Q 046745 1 VYLPIFM-NDHWVLGVVDILGGKI---SIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPI 76 (132)
Q Consensus 1 i~iPi~~-~~HW~L~vi~~~~~~i---~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~ 76 (132)
||+|||. +.||+|+||+.+++++ .+||||++. +.. . +.+++.+..++ +.. .. ++
T Consensus 65 i~iPin~~~~HWsLlvi~~~~~~~~~~~~~DSl~~~-~~~-~----~~l~~~l~~~l------~~~--------~~--~~ 122 (186)
T 2oix_A 65 VFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQK-DPQ-Q----RYLADMAAYHL------GLD--------YQ--QT 122 (186)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTSCEEEEECCCSSC-CHH-H----HHHHHHHHHHT------TCC--------GG--GC
T ss_pred EEEEEeCCCCccEEEEEECCCCeeeeeEEEcCCCCC-CHH-H----HHHHHHHHHHh------CCC--------cc--cc
Confidence 6999999 7999999999999999 999999984 322 1 22333333332 111 01 12
Q ss_pred ccccCCCCCCCCCChhHHHHHHHHHHhcc----C--CCCCCCcccchHHHHHHHHHHHhc
Q 046745 77 VRVRDIPQQKSGGDCGAFLLRYLEVLAHE----L--DVNSYCQQDHVTQFRQALAVKLFG 130 (132)
Q Consensus 77 ~~~~~~P~Q~n~~DCGvfvl~~~~~~~~~----~--~~~~~~~~~~~~~~R~~l~~~l~~ 130 (132)
...++|||.||+|||||||+||++++.+ . .+..++.+ ++..+|+.|...|.+
T Consensus 123 -~~~~~PqQ~Ng~DCGvfv~~~~~~l~~~~~~~~~~~~~~~~~~-~i~~~R~~i~~lI~~ 180 (186)
T 2oix_A 123 -HEMPIAIQSDGYSAGDHVLTGIEVLAHRVLDGTFDYAGGRDLT-DIEPDRGLIRDRLAQ 180 (186)
T ss_dssp -EEECBCCCC--CCHHHHHHHHHHHHHHHHHHTCTTSTTTTCBT-TCCCCHHHHHHHHHC
T ss_pred -ccCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCccCCCcCCHH-HHHHHHHHHHHHHHh
Confidence 2468999999999999999999998854 1 23357788 999999999888764
No 6
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=159.15 Aligned_cols=117 Identities=20% Similarity=0.360 Sum_probs=85.6
Q ss_pred CEEeeeeCCeeEEEEEeCCC------------------------------------------------------------
Q 046745 1 VYLPIFMNDHWVLGVVDILG------------------------------------------------------------ 20 (132)
Q Consensus 1 i~iPi~~~~HW~L~vi~~~~------------------------------------------------------------ 20 (132)
||||||.+.||+|+||+++.
T Consensus 124 I~IPIn~~~HW~LaVI~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (323)
T 3eay_A 124 IFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKKMC 203 (323)
T ss_dssp EEEEEEETTEEEEEEEECTTCSSCBCC-------------------------------------------------CCCC
T ss_pred EEEecCCCCceEEEEEecCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 69999999999999999864
Q ss_pred --CeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCcccccccCCCCCCCCCChhHHHHHH
Q 046745 21 --GKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPIVRVRDIPQQKSGGDCGAFLLRY 98 (132)
Q Consensus 21 --~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~P~Q~n~~DCGvfvl~~ 98 (132)
.+|.+||||++..... +++.++++|...+.. +++. ...++...|... .+.+|+|.|++|||+|||+|
T Consensus 204 k~pcIl~lDSL~~~~~~~----~~~~Lr~YL~~E~~~-----k~~~-~~~f~~~~~~~~-~~~~P~Q~N~~DCGvfvl~~ 272 (323)
T 3eay_A 204 KRPCILILDSLKAASVQN----TVQNLREYLEVEWEV-----KLKT-HRQFSKTNMVDL-CPKVPKQDNSSDCGVYLLQY 272 (323)
T ss_dssp BCSEEEEECSSCCSSHHH----HHHHHHHHHHHHHHH-----HHSS-CCCCCTTTSCEE-CCBCCCCCSTTCHHHHHHHH
T ss_pred CCCeEEEEECCCCCCcch----HHHHHHHHHHHHHHh-----hcCC-CcCCCHhHceec-cCCCCCcCCCCcHHHHHHHH
Confidence 2699999999864332 345566665555442 2111 123555667654 46799999999999999999
Q ss_pred HHHHhccCCCC---------CCCcccchHHHHHHHHHHHh
Q 046745 99 LEVLAHELDVN---------SYCQQDHVTQFRQALAVKLF 129 (132)
Q Consensus 99 ~~~~~~~~~~~---------~~~~~~~~~~~R~~l~~~l~ 129 (132)
|++++.+.+++ .|+.. .+...|..+..-|.
T Consensus 273 ~e~~~~~~~~~f~~~~~~~~wf~~~-~i~~kR~ei~~LI~ 311 (323)
T 3eay_A 273 VESFFKDPIVNFELPIHLEKWFPRH-VIKTKREDIRELIL 311 (323)
T ss_dssp HHHHHHSCCCCCCSSCBCTTSSCHH-HHHTHHHHHHHHHH
T ss_pred HHHHHhCCccccccccccccCCCHH-HHHHHHHHHHHHHH
Confidence 99999987642 35556 88888988876654
No 7
>4ekf_A Adenain; alpha and beta protein (A+B), hydrolase; HET: CSD; 0.98A {Human adenovirus 2} PDB: 1nln_A 1avp_A
Probab=97.74 E-value=0.00035 Score=47.37 Aligned_cols=84 Identities=13% Similarity=0.165 Sum_probs=51.1
Q ss_pred CCeeEEEEEeCCCCeEEEEeCCCCCCChHHHHHHHHhHHHHHHHHHHhhhccCCCCCCCCCcccCCcccccccCCCCCCC
Q 046745 8 NDHWVLGVVDILGGKISIYDSMIDLTNDSVLVRQLLPVADMIPLVLQKISYHETNPDCSEVISKIPWPIVRVRDIPQQKS 87 (132)
Q Consensus 8 ~~HW~L~vi~~~~~~i~~~DSl~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~P~Q~n 87 (132)
|.||....-|+..++++.||++|=++ .++..+.+. ++ ..+++..+ .....++ =.+.+...+.-|=.+
T Consensus 52 GvHWiA~Aw~P~s~~~YmFDPfG~sd--~~L~qiY~F--~Y-~~llkRSA-L~sspdR-------Cv~LvkstqsVQcp~ 118 (204)
T 4ekf_A 52 GVHWMAFAWNPRSKTCYLFEPFGFSD--QRLKQVYQF--EY-ESLLRRSA-IASSPDR-------CITLEKSTQSVQGPN 118 (204)
T ss_dssp CCCEEEEEEETTTTEEEEECTBTTCS--HHHHHHHHH--HH-HHHHHHHC-C---------------EEEECCSBCSCTT
T ss_pred ceeEEEeEecCCcceEEEeCCCCCCH--HHHHHHhhh--hH-HHHHHHHh-hcCCCCc-------eeEEEeccccccCcC
Confidence 37999999999999999999999753 344433321 01 12333222 1001111 122232334445568
Q ss_pred CCChhHHHHHHHHHHhc
Q 046745 88 GGDCGAFLLRYLEVLAH 104 (132)
Q Consensus 88 ~~DCGvfvl~~~~~~~~ 104 (132)
+.-||.|.|.|+.++..
T Consensus 119 SaACGLFC~lFL~aF~~ 135 (204)
T 4ekf_A 119 SAAAGLFCCMFLHAFAN 135 (204)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHh
Confidence 99999999999999875
No 8
>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}
Probab=59.27 E-value=12 Score=23.63 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=18.7
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCC
Q 046745 84 QQKSGGDCGAFLLRYLEVLAHELDV 108 (132)
Q Consensus 84 ~Q~n~~DCGvfvl~~~~~~~~~~~~ 108 (132)
+|.+..|||+-++..+-.+. |.+.
T Consensus 10 ~Q~~~~dcglacLa~i~~~~-g~~~ 33 (156)
T 3k8u_A 10 PQIDTRDCGPAVLASVAKHY-GSNY 33 (156)
T ss_dssp CCSSTTCHHHHHHHHHHHHT-TCCC
T ss_pred ECCCCCCHHHHHHHHHHHHh-CCCC
Confidence 58888999999998876664 5543
No 9
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=35.09 E-value=57 Score=20.04 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=17.0
Q ss_pred CCeeEEEEEeCCCCeEEEEeCCCC
Q 046745 8 NDHWVLGVVDILGGKISIYDSMID 31 (132)
Q Consensus 8 ~~HW~L~vi~~~~~~i~~~DSl~~ 31 (132)
++|.+++-++-.++.+.+.||-.+
T Consensus 86 g~~~Vv~~~~~~~~~~~I~dP~~g 109 (142)
T 3zua_A 86 GRHFILTKVSKEANRYLIFDLEQR 109 (142)
T ss_dssp SCCEEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEEEeCCCCEEEEEcCCCC
Confidence 357776666644478999999755
No 10
>1sx5_A Type II restriction enzyme ecorv; endonuclease, protein-DNA complex, hydrolase/DNA complex; 1.50A {Escherichia coli} SCOP: c.52.1.2 PDB: 1stx_A 1eon_A* 1eo3_A* 1eo4_A* 1eoo_A* 1eop_A* 1rve_A 2b0d_A 2b0e_A 1b94_A* 1az3_A 1az0_A* 1b95_A* 1bgb_A* 1bsu_A* 1bua_A* 1rv5_A 1rva_A* 1rvb_A* 1rvc_A* ...
Probab=33.22 E-value=7 Score=27.33 Aligned_cols=19 Identities=26% Similarity=0.551 Sum_probs=14.8
Q ss_pred CEEeeee-CCeeEEEEEeCC
Q 046745 1 VYLPIFM-NDHWVLGVVDIL 19 (132)
Q Consensus 1 i~iPi~~-~~HW~L~vi~~~ 19 (132)
|..|... .+||+|.+|-.+
T Consensus 120 I~~PY~~Y~gH~vLGivYtr 139 (244)
T 1sx5_A 120 IVYPFDQYIAHWIIGYVYTR 139 (244)
T ss_dssp BSSCGGGEEEEEEEEEEEEE
T ss_pred cccccccccccEEEEEEEEc
Confidence 3467888 799999998654
No 11
>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B
Probab=31.11 E-value=55 Score=23.07 Aligned_cols=23 Identities=13% Similarity=0.092 Sum_probs=18.2
Q ss_pred CCCCCCCCCChhHHHHHHHHHHh
Q 046745 81 DIPQQKSGGDCGAFLLRYLEVLA 103 (132)
Q Consensus 81 ~~P~Q~n~~DCGvfvl~~~~~~~ 103 (132)
..-.|.|...||+=++..+-.-+
T Consensus 71 qf~tQ~n~ayCGlASlaMVLNAL 93 (254)
T 2bu3_A 71 QFVTQVNQAYCGVASIIMVLNSL 93 (254)
T ss_dssp HCCCCSSTTCHHHHHHHHHHHHT
T ss_pred cccccCCCCchHHHHHHHHHHhh
Confidence 45579999999999888775544
No 12
>3rnv_A HC-Pro, helper component proteinase; cysteine protease, proteolysis, hydrolase; 2.00A {Turnip mosaic virus}
Probab=30.64 E-value=54 Score=21.40 Aligned_cols=22 Identities=27% Similarity=0.155 Sum_probs=18.6
Q ss_pred EEEEeCCCCeEEEEeCCCCCCC
Q 046745 13 LGVVDILGGKISIYDSMIDLTN 34 (132)
Q Consensus 13 L~vi~~~~~~i~~~DSl~~~~~ 34 (132)
.+.||...+++.+.||.|+...
T Consensus 106 ~ILVDH~~ktmHViDs~Gs~~t 127 (158)
T 3rnv_A 106 RMLVDHKTKIIHVVDSYGSLST 127 (158)
T ss_dssp EEEEETTTTEEEEECCSSSCSS
T ss_pred cEEEcCCCCeEEeccCCCCCCc
Confidence 3578999999999999998643
No 13
>1p22_C Beta-catenin, Pro2286; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} PDB: 2g57_A*
Probab=27.46 E-value=14 Score=16.52 Aligned_cols=10 Identities=30% Similarity=0.378 Sum_probs=5.5
Q ss_pred CCCCC-ChhHH
Q 046745 85 QKSGG-DCGAF 94 (132)
Q Consensus 85 Q~n~~-DCGvf 94 (132)
|.++| |.|+.
T Consensus 8 qq~~y~DSGI~ 18 (26)
T 1p22_C 8 QQQSYLDSGIH 18 (26)
T ss_pred hhcCccccccc
Confidence 33555 77763
Done!